BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029006
         (200 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|242129048|gb|ACS83603.1| ATP synthase delta subunit 2 [Gossypium hirsutum]
          Length = 201

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 164/201 (81%), Positives = 184/201 (91%), Gaps = 1/201 (0%)

Query: 1   MFRQASRLLARASAVTR-SRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           MFRQASRLLAR +   R SRAFSS VPA PA DS+F+ESW KV PN++PPKTPS +MTPR
Sbjct: 1   MFRQASRLLARTTTPWRGSRAFSSDVPATPAQDSSFIESWSKVIPNLDPPKTPSSFMTPR 60

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P TP++IPSKLTVNFVLPYASELSAKEVDMVIVPA+TGQMG+LPGHVPTIAELKPG+LSV
Sbjct: 61  PATPSAIPSKLTVNFVLPYASELSAKEVDMVIVPATTGQMGILPGHVPTIAELKPGILSV 120

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           H+GND  KYF+SSGFA IHANSVADIIAVEAVP+D++DP+LVQKGLA+F QKL SATTDL
Sbjct: 121 HEGNDVTKYFLSSGFALIHANSVADIIAVEAVPVDRLDPALVQKGLADFTQKLVSATTDL 180

Query: 180 EKAEAQIGVDVHSALNSALTG 200
           EKAEAQIGVDVHSA+NSA+TG
Sbjct: 181 EKAEAQIGVDVHSAMNSAITG 201


>gi|255575798|ref|XP_002528798.1| ATP synthase delta chain, mitochondrial, putative [Ricinus
           communis]
 gi|223531801|gb|EEF33620.1| ATP synthase delta chain, mitochondrial, putative [Ricinus
           communis]
          Length = 204

 Score =  332 bits (851), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 161/204 (78%), Positives = 178/204 (87%), Gaps = 4/204 (1%)

Query: 1   MFRQASRLLARA----SAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYM 56
           M RQ SRL  R+      +   RA S++VPA  +VDS FVESW+KV PNM+PPKTP+ +M
Sbjct: 1   MLRQTSRLFGRSLTQQPKMMMGRAMSTEVPATASVDSDFVESWRKVVPNMDPPKTPAAFM 60

Query: 57  TPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGV 116
            PRP TP++IPSKLTVNFVLPYASELS KEVDMVI+PA+TGQMGVLPGHVPTIAELKPG+
Sbjct: 61  QPRPSTPSTIPSKLTVNFVLPYASELSTKEVDMVIMPATTGQMGVLPGHVPTIAELKPGI 120

Query: 117 LSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           LSVH+GND  KYF+SSGFAFIHANSVADIIAVEAVP+D IDPSLVQKGLAEF QKLSSAT
Sbjct: 121 LSVHEGNDVTKYFLSSGFAFIHANSVADIIAVEAVPVDHIDPSLVQKGLAEFTQKLSSAT 180

Query: 177 TDLEKAEAQIGVDVHSALNSALTG 200
           TDLEKAEAQIGVDVHSALNSALTG
Sbjct: 181 TDLEKAEAQIGVDVHSALNSALTG 204


>gi|2493046|sp|Q40089.1|ATP4_IPOBA RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
 gi|217938|dbj|BAA01511.1| mitochondrial F1-ATPase delta subunit [Ipomoea batatas]
          Length = 200

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 154/200 (77%), Positives = 178/200 (89%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFR +SRLLARA+ +   R FS+ +PA  A DSTFVE+WKK+ PN++PPKTPS YM PRP
Sbjct: 1   MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
            TP+SIPSKLTVNFVLPY+SEL+ KEVDMVI+PA+TGQMGVLPGHV TIAELKPGV+SVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +GND  KYFVS GFAFIHANS ADIIAVEAVP+D+ID +LVQKGLAEF QKL++A+TD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180

Query: 181 KAEAQIGVDVHSALNSALTG 200
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200


>gi|15237998|ref|NP_199514.1| ATP synthase subunit delta' [Arabidopsis thaliana]
 gi|2493045|sp|Q96252.1|ATP4_ARATH RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
 gi|13430526|gb|AAK25885.1|AF360175_1 putative ATP synthase delta chain, mitochondrial precursor
           [Arabidopsis thaliana]
 gi|1655484|dbj|BAA13601.1| delta-prime subunit of mitochondrial F1-ATPase [Arabidopsis
           thaliana]
 gi|9759445|dbj|BAB10242.1| ATP synthase delta' chain, mitochondrial precursor [Arabidopsis
           thaliana]
 gi|15810621|gb|AAL07198.1| putative ATP synthase delta chain, mitochondrial precursor
           [Arabidopsis thaliana]
 gi|332008076|gb|AED95459.1| ATP synthase subunit delta' [Arabidopsis thaliana]
          Length = 203

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/205 (75%), Positives = 182/205 (88%), Gaps = 7/205 (3%)

Query: 1   MFRQASRLLARASAVTRS-----RAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVY 55
           MF+QASRLL+R+ A   S     RAFS+++P+   +DSTFVE+WKKV PNM+PP+TPS +
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPST--LDSTFVEAWKKVAPNMDPPQTPSAF 58

Query: 56  MTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
           M PRP TP+SIP+KLTVNFVLPY SEL+ KEVDMVI+PASTGQMGVLPGHVPTIAELKPG
Sbjct: 59  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 118

Query: 116 VLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           ++SVH+G D KKYF+SSGFAF+HANSVADIIAVEAVP+D IDPS VQKGLAEF QKL+SA
Sbjct: 119 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 178

Query: 176 TTDLEKAEAQIGVDVHSALNSALTG 200
           TTDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 179 TTDLEKAEAQIGVEVHSAINAALSG 203


>gi|147863390|emb|CAN84027.1| hypothetical protein VITISV_044183 [Vitis vinifera]
          Length = 206

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 159/206 (77%), Positives = 180/206 (87%), Gaps = 6/206 (2%)

Query: 1   MFRQASRLLARASAVTRSRA------FSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSV 54
           M RQA+RLLAR +  + S        FS+ +PAAPA DSTF+++WKK+ PN++PP TP  
Sbjct: 1   MLRQATRLLARPAIASSSSFAARARPFSTDLPAAPAEDSTFIDAWKKIIPNIDPPATPLT 60

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKP 114
           +M PRPQTP+SIPSKLTVNFVLPYASELSAKEVDMVI+PA+TGQMGVLPGHV TIAELKP
Sbjct: 61  FMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120

Query: 115 GVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           GV+SVH+GND  KYF+SSGFA IHANS ADIIA+EAVPIDQIDPSLVQKGLA+F QKLSS
Sbjct: 121 GVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSS 180

Query: 175 ATTDLEKAEAQIGVDVHSALNSALTG 200
           A+TDLEKAEAQIGVDVHSALNSALTG
Sbjct: 181 ASTDLEKAEAQIGVDVHSALNSALTG 206


>gi|118484950|gb|ABK94340.1| unknown [Populus trichocarpa]
          Length = 207

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 153/207 (73%), Positives = 177/207 (85%), Gaps = 7/207 (3%)

Query: 1   MFRQASRLLARASAVTR-------SRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPS 53
           M RQASRLL R+ A T+       +R  S+ +P  P  DS F+ESWKKV PN++PPKTPS
Sbjct: 1   MLRQASRLLTRSIATTQQPIRVMGARPMSTNLPDTPVQDSAFIESWKKVAPNIDPPKTPS 60

Query: 54  VYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELK 113
            +M PRP TP++IPSK+TVNFVLPYASEL++KEVDMVI+PA+TGQMGVLPGHVPTIAELK
Sbjct: 61  AFMKPRPPTPSTIPSKITVNFVLPYASELTSKEVDMVIIPATTGQMGVLPGHVPTIAELK 120

Query: 114 PGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
           PGVLSVH+GND KKYF+SSGF F+HANSVADI+ VEAVPID ID +LVQKGLA+F QKLS
Sbjct: 121 PGVLSVHEGNDVKKYFLSSGFVFVHANSVADIVVVEAVPIDHIDQNLVQKGLADFTQKLS 180

Query: 174 SATTDLEKAEAQIGVDVHSALNSALTG 200
           SATT+LEKAEAQIG+DVHSALNSAL G
Sbjct: 181 SATTELEKAEAQIGIDVHSALNSALVG 207


>gi|224136358|ref|XP_002326840.1| predicted protein [Populus trichocarpa]
 gi|222835155|gb|EEE73590.1| predicted protein [Populus trichocarpa]
          Length = 198

 Score =  318 bits (816), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 155/201 (77%), Positives = 177/201 (88%), Gaps = 4/201 (1%)

Query: 1   MFRQASR-LLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           MFR+A+  +LAR     R+R FS+ +PAA  +DSTF E+WKKV PN++PPKTP  +M PR
Sbjct: 1   MFRRATTGILAR---TIRARLFSTGLPAAQTIDSTFAEAWKKVAPNLDPPKTPLSFMQPR 57

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P TP++IPSKLTVNFVLPYASE+S KEVDMVI+PASTGQMGVLPGHV TI ELKPGVLSV
Sbjct: 58  PPTPSAIPSKLTVNFVLPYASEISGKEVDMVIIPASTGQMGVLPGHVSTITELKPGVLSV 117

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           H+GN+ KKYFVSSGFAFIHANS+ADI+AVEA P+DQID SLVQKGLAEF QKLSSA+TDL
Sbjct: 118 HEGNEVKKYFVSSGFAFIHANSIADIVAVEAAPLDQIDSSLVQKGLAEFTQKLSSASTDL 177

Query: 180 EKAEAQIGVDVHSALNSALTG 200
           EKAEAQIGVDVHSALN+ALTG
Sbjct: 178 EKAEAQIGVDVHSALNAALTG 198


>gi|225453289|ref|XP_002267995.1| PREDICTED: ATP synthase subunit delta', mitochondrial [Vitis
           vinifera]
 gi|297734660|emb|CBI16711.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 160/206 (77%), Positives = 182/206 (88%), Gaps = 6/206 (2%)

Query: 1   MFRQASRLLAR------ASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSV 54
           M RQA+RLLAR      +S   R+R+FS+ +P APA DSTF+++WKK+ PN++PP TP  
Sbjct: 1   MLRQATRLLARPAIASSSSFAARARSFSTDLPTAPAEDSTFIDAWKKIIPNIDPPATPLT 60

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKP 114
           +M PRPQTP+SIPSKLTVNFVLPYASELSAKEVDMVI+PA+TGQMGVLPGHV TIAELKP
Sbjct: 61  FMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120

Query: 115 GVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           GV+SVH+GND  KYF+SSGFA IHANS ADIIA+EAVPIDQIDPSLVQKGLA+F QKLSS
Sbjct: 121 GVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSS 180

Query: 175 ATTDLEKAEAQIGVDVHSALNSALTG 200
           A+TDLEKAEAQIGVDVHSALNSALTG
Sbjct: 181 ASTDLEKAEAQIGVDVHSALNSALTG 206


>gi|449432356|ref|XP_004133965.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Cucumis
           sativus]
 gi|449519178|ref|XP_004166612.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Cucumis
           sativus]
          Length = 200

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 155/200 (77%), Positives = 175/200 (87%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFR+AS LLAR     R+R+FS+ +PAA +    FV +WKKV PN++PPKTP  +M PRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
            TP+SIPSKLTVN VLPYASELSAKEVDMVI+PA+TGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +G++ KKYFVSSGFAFIH NS ADIIAVEAVPI+QID + VQKGLAEF QKL+SA+TDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 200
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200


>gi|297794529|ref|XP_002865149.1| ATP synthase delta [Arabidopsis lyrata subsp. lyrata]
 gi|297310984|gb|EFH41408.1| ATP synthase delta [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/205 (75%), Positives = 181/205 (88%), Gaps = 7/205 (3%)

Query: 1   MFRQASRLLARASAVTR-----SRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVY 55
           M +QASRLL+R+ A        +RAFS+++P+   +DSTFVE+WKKV PNMEPP+TPS +
Sbjct: 1   MLKQASRLLSRSVAAASAKSATTRAFSTELPST--LDSTFVEAWKKVAPNMEPPQTPSAF 58

Query: 56  MTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
           M PRP TP+SIP+KLTVNFVLPY SEL+ KEVDMVI+PASTGQMGVLPGHVPTIAELKPG
Sbjct: 59  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 118

Query: 116 VLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           ++SVH+G D KKYF+SSGFAF+HANSVADIIAVEAVP+D IDPS VQKGLAEF QKL+SA
Sbjct: 119 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 178

Query: 176 TTDLEKAEAQIGVDVHSALNSALTG 200
           TTDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 179 TTDLEKAEAQIGVEVHSAINAALSG 203


>gi|119720786|gb|ABL97963.1| hydrogen-transporting ATP synthase [Brassica rapa]
          Length = 203

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/205 (74%), Positives = 180/205 (87%), Gaps = 7/205 (3%)

Query: 1   MFRQASRLLARA-----SAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVY 55
           M RQASRLL+R+     S    +RAFS+++P+   VDSTFVESWKKV PNM+PP+TPS +
Sbjct: 1   MLRQASRLLSRSVTAASSKSVTARAFSTELPST--VDSTFVESWKKVAPNMDPPQTPSSF 58

Query: 56  MTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
           M PRP T +SIP+KLTVNFVLPYASELS KEVDMVI+PA+TGQMGVLPGHVPTIAELKPG
Sbjct: 59  MKPRPSTASSIPTKLTVNFVLPYASELSGKEVDMVIIPATTGQMGVLPGHVPTIAELKPG 118

Query: 116 VLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           ++SVH+G D KKYFVSSGFAF+HANSVADIIAVEAVP++ ID S VQKGLA+F QKL+SA
Sbjct: 119 IMSVHEGTDIKKYFVSSGFAFLHANSVADIIAVEAVPLENIDASQVQKGLADFTQKLASA 178

Query: 176 TTDLEKAEAQIGVDVHSALNSALTG 200
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 179 STDLEKAEAQIGVEVHSAMNAALSG 203


>gi|356504527|ref|XP_003521047.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Glycine
           max]
          Length = 197

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 156/201 (77%), Positives = 174/201 (86%), Gaps = 5/201 (2%)

Query: 1   MFRQA-SRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           M R+A S LL  AS     R  SS VPA PA DS F E+WKKV+PN++PPKTP  YM PR
Sbjct: 1   MLRRATSSLLTGAS----RRRLSSDVPATPAADSAFAEAWKKVSPNIDPPKTPLAYMKPR 56

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P TP+++PSKLTVNFVLPY+S+L+AKEVDMVIVPA+TGQMGVLPGHV TIAELKPGVLSV
Sbjct: 57  PPTPSALPSKLTVNFVLPYSSQLAAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSV 116

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           H+GND  KYFVSSGFAFIHANSVADIIAVEAVP+D+ID +LVQKGL +F QKL+SATTDL
Sbjct: 117 HEGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQDFTQKLNSATTDL 176

Query: 180 EKAEAQIGVDVHSALNSALTG 200
           EKAEAQIGVDVHSALNSALTG
Sbjct: 177 EKAEAQIGVDVHSALNSALTG 197


>gi|242129044|gb|ACS83601.1| ATP synthase delta subunit 1 [Gossypium hirsutum]
          Length = 200

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 153/200 (76%), Positives = 173/200 (86%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           M R+A  LL R  A  R+R+FS+ +PAA   D+TF+E+W KV PN +PPKTP  +M PRP
Sbjct: 1   MLRRALGLLPRPIAAARARSFSTDLPAAHTADATFMEAWNKVMPNTDPPKTPLSFMHPRP 60

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
            TP+SIP KLTVNFVLPYASELS KEVDMVIVPA+TGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  PTPSSIPPKLTVNFVLPYASELSTKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +G++T KYFVSSGF FIHANS ADIIAVEAVP+DQID +LVQKGLA+F QKLSSATT+LE
Sbjct: 121 EGSETTKYFVSSGFVFIHANSFADIIAVEAVPLDQIDANLVQKGLADFTQKLSSATTELE 180

Query: 181 KAEAQIGVDVHSALNSALTG 200
           KAEAQIG+DVHSALNSALTG
Sbjct: 181 KAEAQIGIDVHSALNSALTG 200


>gi|356520754|ref|XP_003529025.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like [Glycine
           max]
          Length = 197

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 154/200 (77%), Positives = 174/200 (87%), Gaps = 3/200 (1%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           M R+A+  L   S  +R R  S+ VPA PA DS F E+WKKV+PN++PPKTP  YM PRP
Sbjct: 1   MLRRATTSLI--SGASRRR-LSTDVPATPAADSVFAEAWKKVSPNIDPPKTPLAYMKPRP 57

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
            TP+++PSKLTVNFVLPYAS+L+AKEVDMVIVPA+TGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 58  PTPSTLPSKLTVNFVLPYASQLAAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 117

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +GND  KYFVSSGFAFIHANSVADIIAVEAVP+D+ID +LVQKGL EF QKL+SATTDLE
Sbjct: 118 EGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDVNLVQKGLQEFTQKLNSATTDLE 177

Query: 181 KAEAQIGVDVHSALNSALTG 200
           KAEAQIGVDVHSALNSAL+G
Sbjct: 178 KAEAQIGVDVHSALNSALSG 197


>gi|242129050|gb|ACS83604.1| ATP synthase delta subunit 3 [Gossypium hirsutum]
          Length = 201

 Score =  308 bits (789), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 152/201 (75%), Positives = 173/201 (86%), Gaps = 1/201 (0%)

Query: 1   MFRQASRLL-ARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           M  +AS LL  R+    R+R FS+ +PAAP+ D+TF E+W KV PNM+PPKTP  +M PR
Sbjct: 1   MLGRASMLLPCRSILPARARPFSTDLPAAPSADATFTEAWTKVIPNMDPPKTPLSFMQPR 60

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P TP+SIPSKLTVNFVLPYASEL+ KEVDMVIVPA+TGQMGVLPGHV TIAELKPGVLSV
Sbjct: 61  PPTPSSIPSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSV 120

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           H+G++  KYFVSSGF FIHANS ADIIAVEAVP+D++D +LVQKGLAEF  KLSSATTDL
Sbjct: 121 HEGSEMTKYFVSSGFVFIHANSFADIIAVEAVPLDRLDVNLVQKGLAEFTSKLSSATTDL 180

Query: 180 EKAEAQIGVDVHSALNSALTG 200
           EKAEAQIG+DVHSALNSALTG
Sbjct: 181 EKAEAQIGIDVHSALNSALTG 201


>gi|388512823|gb|AFK44473.1| unknown [Lotus japonicus]
          Length = 199

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/201 (75%), Positives = 177/201 (88%), Gaps = 3/201 (1%)

Query: 1   MFRQA-SRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           MFR+A S L+ARA+A TR   FS+ V A  A  S F ++WKKV+PN++PPKTP  +M PR
Sbjct: 1   MFRRATSSLVARAAANTRR--FSTDVGAPAAAGSNFEDAWKKVSPNVDPPKTPLEFMKPR 58

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P TP ++P+KLTVNFVLPY+S+LS+KEVDMVIVPA+TGQMGVLPGHV TIAELKPG+LSV
Sbjct: 59  PPTPNTLPTKLTVNFVLPYSSQLSSKEVDMVIVPATTGQMGVLPGHVATIAELKPGLLSV 118

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           H+GND  KYFVSSGFAF+HANSVADIIAVEAVP+D+IDP+LVQKGL +F QKL+SA+TDL
Sbjct: 119 HEGNDVTKYFVSSGFAFVHANSVADIIAVEAVPLDRIDPNLVQKGLQDFTQKLNSASTDL 178

Query: 180 EKAEAQIGVDVHSALNSALTG 200
           EKAEAQIGVDVHSALNSALTG
Sbjct: 179 EKAEAQIGVDVHSALNSALTG 199


>gi|224126387|ref|XP_002329541.1| predicted protein [Populus trichocarpa]
 gi|222870250|gb|EEF07381.1| predicted protein [Populus trichocarpa]
          Length = 187

 Score =  303 bits (776), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/186 (76%), Positives = 165/186 (88%)

Query: 15  VTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNF 74
           V  +R  S+ +P  P  DS F+ESWKKV PN++PPKTPS +M PRP TP++IPSK+TVNF
Sbjct: 2   VMGARPMSTNLPDTPVQDSAFIESWKKVAPNIDPPKTPSAFMKPRPPTPSTIPSKITVNF 61

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           VLPYASEL++KEVDMVI+PA+TGQMGVLPGHVPTIAELKPGVLSVH+GND KKYF+SSGF
Sbjct: 62  VLPYASELTSKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGNDVKKYFLSSGF 121

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
            F+HANSVADI+ VEAVPID ID +LVQKGLA+F QKLSSATT+LEKAEAQIG+DVHSAL
Sbjct: 122 VFVHANSVADIVVVEAVPIDHIDQNLVQKGLADFTQKLSSATTELEKAEAQIGIDVHSAL 181

Query: 195 NSALTG 200
           NSAL G
Sbjct: 182 NSALVG 187


>gi|223945333|gb|ACN26750.1| unknown [Zea mays]
 gi|414590341|tpg|DAA40912.1| TPA: ATP synthase delta chain [Zea mays]
          Length = 203

 Score =  303 bits (775), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/203 (73%), Positives = 171/203 (84%), Gaps = 3/203 (1%)

Query: 1   MFRQASR-LLARASA--VTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMT 57
           M R A+R L++RA A    R    +++VPA    DSTFVE+WKKV PN+EPP TP   M 
Sbjct: 1   MLRHAARRLVSRAVAPPTARRALATAEVPAEAVEDSTFVEAWKKVAPNIEPPATPLSLMQ 60

Query: 58  PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL 117
           PRP TP +IP+KLTVNFVLPY SE++ KEVDMVIVPA+TGQMGVLPGHV TIAELKPGVL
Sbjct: 61  PRPPTPATIPTKLTVNFVLPYKSEIANKEVDMVIVPATTGQMGVLPGHVATIAELKPGVL 120

Query: 118 SVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           SVH+GND  KYFVSSGFAF+HANS+ADI+AVEA+P+DQIDP+LVQKGLAEF  KL SA+T
Sbjct: 121 SVHEGNDVSKYFVSSGFAFVHANSIADIVAVEAIPVDQIDPALVQKGLAEFTAKLGSAST 180

Query: 178 DLEKAEAQIGVDVHSALNSALTG 200
           DLEKAEAQIGVDVHSALN+ALTG
Sbjct: 181 DLEKAEAQIGVDVHSALNAALTG 203


>gi|226509388|ref|NP_001147558.1| ATP synthase delta chain [Zea mays]
 gi|195612184|gb|ACG27922.1| ATP synthase delta chain [Zea mays]
          Length = 203

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 148/203 (72%), Positives = 171/203 (84%), Gaps = 3/203 (1%)

Query: 1   MFRQASR-LLARASA--VTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMT 57
           M R A+R L++RA A    R    +++VPA    DSTFVE+WKKV PN+EPP TP   M 
Sbjct: 1   MLRHAARRLVSRAVAPPTARRALATAEVPAEAVEDSTFVEAWKKVAPNIEPPATPLSLMQ 60

Query: 58  PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL 117
           PRP TP +IP+KLTVNFVLPY SE++ KEVDMVIVPA+TGQMGVLPGHV TIAELKPGVL
Sbjct: 61  PRPPTPATIPTKLTVNFVLPYKSEIANKEVDMVIVPATTGQMGVLPGHVATIAELKPGVL 120

Query: 118 SVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           SVH+GND  KYFVSSGFAF+HANS+ADI+AVEA+P+DQIDP+LVQKGLAEF  KL +A+T
Sbjct: 121 SVHEGNDVSKYFVSSGFAFVHANSIADIVAVEAIPVDQIDPALVQKGLAEFTAKLGAAST 180

Query: 178 DLEKAEAQIGVDVHSALNSALTG 200
           DLEKAEAQIGVDVHSALN+ALTG
Sbjct: 181 DLEKAEAQIGVDVHSALNAALTG 203


>gi|357512961|ref|XP_003626769.1| ATP synthase delta subunit [Medicago truncatula]
 gi|355520791|gb|AET01245.1| ATP synthase delta subunit [Medicago truncatula]
          Length = 197

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 148/201 (73%), Positives = 173/201 (86%), Gaps = 5/201 (2%)

Query: 1   MFRQA-SRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           MFR+A S L +RA A   +R FS+ V A P  DS+FVE+W KV+PN++PPKTP  ++  R
Sbjct: 1   MFRRATSSLFSRAVA---TRRFSTDV-ATPVTDSSFVEAWNKVSPNLDPPKTPVAFIKSR 56

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P  P+++P+KLTVNFVLPYAS+LSAKEVD+VI+PA+TGQMG+LPGHV TIAELKPGV+ V
Sbjct: 57  PPIPSTLPTKLTVNFVLPYASQLSAKEVDLVIIPATTGQMGILPGHVSTIAELKPGVMIV 116

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
            +GND+ KYFVSSGFAF+HANSVADIIAVEAVP+DQID SLVQKGL EF QKLSSATTDL
Sbjct: 117 QEGNDSTKYFVSSGFAFVHANSVADIIAVEAVPLDQIDASLVQKGLQEFTQKLSSATTDL 176

Query: 180 EKAEAQIGVDVHSALNSALTG 200
           EKAEAQIGVDVHSALNSALT 
Sbjct: 177 EKAEAQIGVDVHSALNSALTA 197


>gi|212274417|ref|NP_001130528.1| uncharacterized protein LOC100191627 [Zea mays]
 gi|194689388|gb|ACF78778.1| unknown [Zea mays]
 gi|195657677|gb|ACG48306.1| ATP synthase delta chain [Zea mays]
 gi|414886787|tpg|DAA62801.1| TPA: ATP synthase delta chain [Zea mays]
          Length = 203

 Score =  298 bits (764), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 147/203 (72%), Positives = 168/203 (82%), Gaps = 3/203 (1%)

Query: 1   MFRQASRLLARASAVTRSRA---FSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMT 57
           M R A+R L   +A   +      +++VPA  A DSTFVE+WKKV PN+EPP TP   M 
Sbjct: 1   MLRHAARRLVSRTAAAPTARRALVTAEVPAEAAEDSTFVEAWKKVAPNIEPPTTPLFLMQ 60

Query: 58  PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL 117
           PRP TP +IP+KLTVNFVLPY SE++ KEVDMVIVPA+TGQMGVLPGHV TIAELKPGVL
Sbjct: 61  PRPPTPATIPTKLTVNFVLPYKSEIANKEVDMVIVPATTGQMGVLPGHVATIAELKPGVL 120

Query: 118 SVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           SVH+GND  KYFVSSGFAF+HANS+ADI+AVEAVP+DQIDP+ VQKGLAEF  KL SA+T
Sbjct: 121 SVHEGNDVTKYFVSSGFAFVHANSIADIVAVEAVPVDQIDPAFVQKGLAEFTAKLGSAST 180

Query: 178 DLEKAEAQIGVDVHSALNSALTG 200
           DLEKAEAQIGVDVHSALN+ALTG
Sbjct: 181 DLEKAEAQIGVDVHSALNAALTG 203


>gi|242045722|ref|XP_002460732.1| hypothetical protein SORBIDRAFT_02g033950 [Sorghum bicolor]
 gi|241924109|gb|EER97253.1| hypothetical protein SORBIDRAFT_02g033950 [Sorghum bicolor]
          Length = 203

 Score =  295 bits (754), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 145/203 (71%), Positives = 166/203 (81%), Gaps = 3/203 (1%)

Query: 1   MFRQASRLLARASAVTRSRAFSS---QVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMT 57
           M R A+R L   +A       +    +VPA    DSTFVE+W+KV PN+EPP TP   M 
Sbjct: 1   MLRHAARRLVSRTAAAAPARRALATAEVPAEAGEDSTFVEAWRKVAPNLEPPTTPLSLMK 60

Query: 58  PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL 117
           PRP TP +IP+KLTVNFVLPY SE++ KEVDMVIVPA+TGQMGVLPGHV TIAELKPGVL
Sbjct: 61  PRPPTPATIPTKLTVNFVLPYKSEIANKEVDMVIVPATTGQMGVLPGHVATIAELKPGVL 120

Query: 118 SVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           SVH+GND  KYFVSSGFAF+HANS+ADI+AVEAVP+DQIDP+LVQKGLA+F  KL SA+T
Sbjct: 121 SVHEGNDVTKYFVSSGFAFVHANSIADIVAVEAVPVDQIDPALVQKGLADFTAKLGSAST 180

Query: 178 DLEKAEAQIGVDVHSALNSALTG 200
           DLEKAEAQIGVDVHSALN+ALTG
Sbjct: 181 DLEKAEAQIGVDVHSALNAALTG 203


>gi|2493047|sp|Q41000.1|ATP4_PEA RecName: Full=ATP synthase subunit delta', mitochondrial; AltName:
           Full=F-ATPase delta' subunit; Flags: Precursor
 gi|294087|gb|AAA33646.1| F1-ATPase delta-prime subunit [Pisum sativum]
          Length = 197

 Score =  288 bits (737), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 143/201 (71%), Positives = 172/201 (85%), Gaps = 5/201 (2%)

Query: 1   MFRQA-SRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           MFR+A S  L+RASA   +R FS+ V A PA +S+FVE+W+KV+PN++PPKTP  ++  R
Sbjct: 1   MFRRATSTFLSRASA---TRRFSTDV-ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTR 56

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P  P++IP+KLTVNFVLPY+S+L+AKEVD VI+PA+TG+MGVLPGHV TIAELKPGVL+V
Sbjct: 57  PPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTV 116

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
            +G DT KYFVSSGF FIHANSVADIIAVEAVP++Q+D  LVQKGL EF QKL+SATTDL
Sbjct: 117 QEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL 176

Query: 180 EKAEAQIGVDVHSALNSALTG 200
           EK EAQIG+DV SALNSALTG
Sbjct: 177 EKREAQIGIDVDSALNSALTG 197


>gi|115472191|ref|NP_001059694.1| Os07g0495200 [Oryza sativa Japonica Group]
 gi|24059902|dbj|BAC21366.1| putative ATP synthase delta' chain, mitochondrial precursor [Oryza
           sativa Japonica Group]
 gi|50509197|dbj|BAD30401.1| putative ATP synthase delta' chain, mitochondrial precursor [Oryza
           sativa Japonica Group]
 gi|113611230|dbj|BAF21608.1| Os07g0495200 [Oryza sativa Japonica Group]
 gi|125558408|gb|EAZ03944.1| hypothetical protein OsI_26080 [Oryza sativa Indica Group]
 gi|215678594|dbj|BAG92249.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 205

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 137/179 (76%), Positives = 156/179 (87%)

Query: 22  SSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASE 81
           +++VPA  A DS F E+WKKV PN+E P TP   M PRP TP +IPSKLTVNFVLPY SE
Sbjct: 27  TAEVPAEAATDSAFAEAWKKVAPNIEAPATPMSLMQPRPPTPAAIPSKLTVNFVLPYKSE 86

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           ++ KEVDMVIVPA+TGQMGVLPGHV TIAELKPGVLSVH+GND  KYFVSSGFAF+HANS
Sbjct: 87  IANKEVDMVIVPATTGQMGVLPGHVSTIAELKPGVLSVHEGNDITKYFVSSGFAFVHANS 146

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
           +ADI+AVEAVP+DQIDP+ VQ+GLAEFN KL SA+T+LEKAEAQIGVDVHSALN+AL G
Sbjct: 147 IADIVAVEAVPLDQIDPAAVQQGLAEFNAKLGSASTELEKAEAQIGVDVHSALNAALAG 205


>gi|357122753|ref|XP_003563079.1| PREDICTED: ATP synthase subunit delta', mitochondrial-like
           [Brachypodium distachyon]
          Length = 206

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/186 (71%), Positives = 155/186 (83%)

Query: 15  VTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNF 74
           V+R    +++VPA    D  F+E+WKKV   +EPP+TP   M PRP TP SIPSKLTVNF
Sbjct: 21  VSRRALATAEVPAEAGEDPAFLEAWKKVTTIIEPPQTPLAAMKPRPPTPASIPSKLTVNF 80

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           VLPY SE+  KEVDM++VPA+TG MG+LPGHV TIAELKPGVLSVH+GND  KYFVSSGF
Sbjct: 81  VLPYKSEIDNKEVDMIMVPATTGLMGILPGHVSTIAELKPGVLSVHEGNDVTKYFVSSGF 140

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           AF+HANS+ D++AVEAVP+DQID SLVQKGLA+F  KL SA+TDLEKAEAQIGVDVHSAL
Sbjct: 141 AFVHANSITDVVAVEAVPLDQIDQSLVQKGLADFTAKLGSASTDLEKAEAQIGVDVHSAL 200

Query: 195 NSALTG 200
           N+ALTG
Sbjct: 201 NAALTG 206


>gi|116781731|gb|ABK22219.1| unknown [Picea sitchensis]
 gi|224285685|gb|ACN40558.1| unknown [Picea sitchensis]
          Length = 213

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 131/191 (68%), Positives = 154/191 (80%), Gaps = 2/191 (1%)

Query: 12  ASAVTRSRAFSSQVPAAP--AVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSK 69
           + AV   R F+   PA    A    F+ +WKKV PNMEPPKTP  +M PRP  P SIP+K
Sbjct: 23  SGAVAGRRGFADNTPATATDAAHQDFITAWKKVAPNMEPPKTPLTFMKPRPVVPGSIPTK 82

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+NFVLPY  ELS+KEVDMVIVPA+TGQMG+LPGHV TIAELKPG+LSVH+G+D  KYF
Sbjct: 83  LTINFVLPYQVELSSKEVDMVIVPATTGQMGILPGHVATIAELKPGLLSVHEGSDVNKYF 142

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VSSGFAFIHANS  DIIAVEAVP+D+ID   VQKGLAE+ QKLSSA+TDLE+AEAQIG++
Sbjct: 143 VSSGFAFIHANSYTDIIAVEAVPLDKIDREQVQKGLAEYTQKLSSASTDLERAEAQIGIE 202

Query: 190 VHSALNSALTG 200
            HS LN++L+G
Sbjct: 203 FHSTLNASLSG 213


>gi|116781283|gb|ABK22036.1| unknown [Picea sitchensis]
 gi|224285502|gb|ACN40471.1| unknown [Picea sitchensis]
          Length = 213

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 129/184 (70%), Positives = 152/184 (82%), Gaps = 2/184 (1%)

Query: 19  RAFSSQVPAAP--AVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVL 76
           R F+   PA    A    F+ +WKKV PNMEPPKTP  +M PRP  P SIP+KLT+NFVL
Sbjct: 30  RGFADNTPATATDAAHQDFITAWKKVAPNMEPPKTPLTFMKPRPAVPGSIPTKLTINFVL 89

Query: 77  PYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAF 136
           PY  ELS+KEVDMVIVPA+TGQMG+LPGHV TIAELKPG+LSVH+G+D  KYFVSSGFAF
Sbjct: 90  PYQVELSSKEVDMVIVPATTGQMGILPGHVATIAELKPGLLSVHEGSDVNKYFVSSGFAF 149

Query: 137 IHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNS 196
           IHANS  DIIAVEAVP+D+ID   VQKGLAE+ QKLSSA+TDLE+AEAQIG++ HS+LN+
Sbjct: 150 IHANSYTDIIAVEAVPLDRIDREQVQKGLAEYTQKLSSASTDLERAEAQIGIEFHSSLNA 209

Query: 197 ALTG 200
           +L+G
Sbjct: 210 SLSG 213


>gi|168000450|ref|XP_001752929.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696092|gb|EDQ82433.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 206

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 120/199 (60%), Positives = 153/199 (76%), Gaps = 3/199 (1%)

Query: 3   RQASRLLARASAVTR---SRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
           RQ  R   R  A  R   +R+F+   PA   V  +F + WKKV PN + P  PS YM+ R
Sbjct: 4   RQGLRSGLRTWAACRPVLARSFADAAPAEAIVPESFKQDWKKVAPNYDLPHFPSEYMSAR 63

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P   T++P+KLTVNFVLP+  E+ AKEVDMVIVPA++GQMGVLPGHVPTIAELKPG++SV
Sbjct: 64  PPVATTLPTKLTVNFVLPHQFEMQAKEVDMVIVPATSGQMGVLPGHVPTIAELKPGLMSV 123

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           H+G D K+YFVSSGFAF+HANSVADI+A+EAV +D+ DP  V+KG+ E+ QK+++A  DL
Sbjct: 124 HEGADVKQYFVSSGFAFVHANSVADIVAIEAVSLDKFDPEEVKKGVQEYTQKVANAKDDL 183

Query: 180 EKAEAQIGVDVHSALNSAL 198
           E+AEAQIG++VHSAL +AL
Sbjct: 184 ERAEAQIGLEVHSALQAAL 202


>gi|167999839|ref|XP_001752624.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696155|gb|EDQ82495.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 190

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 113/168 (67%), Positives = 140/168 (83%)

Query: 31  VDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMV 90
           V  TF + WKKV PN + P  PS YM  RP  PT++P+KLTVNFVLP+  E+ AKEVDMV
Sbjct: 19  VPETFKQDWKKVAPNYDLPHFPSEYMAARPSVPTTLPTKLTVNFVLPHEFEMQAKEVDMV 78

Query: 91  IVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEA 150
           IVPA++GQMGVLPGHVPTIAE+KPG++SVH+G D K YFVSSGFAF+HANSVADI+A+EA
Sbjct: 79  IVPATSGQMGVLPGHVPTIAEMKPGIMSVHEGTDVKNYFVSSGFAFVHANSVADIVAIEA 138

Query: 151 VPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           VP+D+ DP  V+KG+ E+ QK+S+A  DLE+AEAQIG++VHSAL +AL
Sbjct: 139 VPLDRFDPEEVRKGVQEYTQKVSNAKEDLERAEAQIGLEVHSALQAAL 186


>gi|168057759|ref|XP_001780880.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667662|gb|EDQ54286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 164

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 109/164 (66%), Positives = 139/164 (84%)

Query: 35  FVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPA 94
           F E WKK+ PN + P  PS YM  RP  P+++P+KLTVNFVLP+  E+ AKEVDMVIVPA
Sbjct: 1   FKEDWKKIAPNYDLPHFPSEYMNARPSVPSTLPAKLTVNFVLPHQFEMQAKEVDMVIVPA 60

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPID 154
           ++GQMGVLPGHVPTIAELKPG++SVH+G+D K+YFVSSGFAF+HANSVADI+A+EAV +D
Sbjct: 61  TSGQMGVLPGHVPTIAELKPGLMSVHEGSDVKQYFVSSGFAFVHANSVADIVAIEAVSLD 120

Query: 155 QIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           + DP  V+KG+ E+ QK+++A  DLE+AEAQIG++VHSAL +AL
Sbjct: 121 KFDPEEVKKGVQEYTQKVANAKDDLERAEAQIGLEVHSALQAAL 164


>gi|302762286|ref|XP_002964565.1| hypothetical protein SELMODRAFT_166842 [Selaginella moellendorffii]
 gi|302814296|ref|XP_002988832.1| hypothetical protein SELMODRAFT_184168 [Selaginella moellendorffii]
 gi|300143403|gb|EFJ10094.1| hypothetical protein SELMODRAFT_184168 [Selaginella moellendorffii]
 gi|300168294|gb|EFJ34898.1| hypothetical protein SELMODRAFT_166842 [Selaginella moellendorffii]
          Length = 215

 Score =  226 bits (575), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 119/205 (58%), Positives = 149/205 (72%), Gaps = 8/205 (3%)

Query: 1   MFRQASRL--LARASAVTRSRAFSSQ----VPAAPAVDSTFVESWKKVNPNMEPPKTPSV 54
           + R A+ L   A +S   R R ++ +     P   AV++ F E W KV PN++ PKTP  
Sbjct: 8   LLRSAAPLWRCATSSGGIRRRCYAEEAKKDTPTNKAVEA-FKEMWSKVAPNLDFPKTPHE 66

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKP 114
            M  RP  P +IP KLTVNFVLP    ++A++VDMVI+PA++G MGVLPGHVPTIAELKP
Sbjct: 67  SMASRPPVPPAIPEKLTVNFVLPSEVAMNAEKVDMVILPATSGLMGVLPGHVPTIAELKP 126

Query: 115 GVLSVHDGNDTK-KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
           GVLSVHDG   K +YF+SSGFAF+HANSV DI+ VEA P+D+ DP  V+K LA++NQKLS
Sbjct: 127 GVLSVHDGGQVKTQYFLSSGFAFVHANSVTDIVVVEAAPLDRFDPDEVRKNLADYNQKLS 186

Query: 174 SATTDLEKAEAQIGVDVHSALNSAL 198
           SATTDL+KA+AQIGVDV  +L  AL
Sbjct: 187 SATTDLDKAQAQIGVDVFGSLAFAL 211


>gi|414590342|tpg|DAA40913.1| TPA: hypothetical protein ZEAMMB73_724426 [Zea mays]
          Length = 112

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 96/112 (85%), Positives = 106/112 (94%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAV 148
           MVIVPA+TGQMGVLPGHV TIAELKPGVLSVH+GND  KYFVSSGFAF+HANS+ADI+AV
Sbjct: 1   MVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVSKYFVSSGFAFVHANSIADIVAV 60

Query: 149 EAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
           EA+P+DQIDP+LVQKGLAEF  KL SA+TDLEKAEAQIGVDVHSALN+ALTG
Sbjct: 61  EAIPVDQIDPALVQKGLAEFTAKLGSASTDLEKAEAQIGVDVHSALNAALTG 112


>gi|118485281|gb|ABK94500.1| unknown [Populus trichocarpa]
          Length = 112

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 97/112 (86%), Positives = 105/112 (93%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAV 148
           MVI+PASTGQMGVLPGHV  I ELKPGVLSVH+GN+ KKYFVSSGFAFIHANS+ADI+AV
Sbjct: 1   MVIIPASTGQMGVLPGHVSAITELKPGVLSVHEGNEVKKYFVSSGFAFIHANSIADIVAV 60

Query: 149 EAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
           EA P+DQID SLVQKGLAEF QKLSSA+TDLEKAEAQIGVDVHSALN+ALTG
Sbjct: 61  EAAPLDQIDSSLVQKGLAEFTQKLSSASTDLEKAEAQIGVDVHSALNAALTG 112


>gi|125600310|gb|EAZ39886.1| hypothetical protein OsJ_24324 [Oryza sativa Japonica Group]
          Length = 202

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 96/114 (84%), Positives = 107/114 (93%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           VDMVIVPA+TGQMGVLPGHV TIAELKPGVLSVH+GND  KYFVSSGFAF+HANS+ADI+
Sbjct: 89  VDMVIVPATTGQMGVLPGHVSTIAELKPGVLSVHEGNDITKYFVSSGFAFVHANSIADIV 148

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
           AVEAVP+DQIDP+ VQ+GLAEFN KL SA+T+LEKAEAQIGVDVHSALN+AL G
Sbjct: 149 AVEAVPLDQIDPAAVQQGLAEFNAKLGSASTELEKAEAQIGVDVHSALNAALAG 202


>gi|303274831|ref|XP_003056730.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
 gi|226461082|gb|EEH58375.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
          Length = 213

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 100/210 (47%), Positives = 147/210 (70%), Gaps = 11/210 (5%)

Query: 2   FRQASRLLARASAVTRS--RAFSSQVPAAPAVDS------TFVESWKKVNP--NMEPPKT 51
            RQA R L   S+ T +  RAF++  P   A ++      +F++++ +  P   M+ P T
Sbjct: 3   LRQAMRRLGALSSQTSTAARAFTTSAPRLEATEAQKESIKSFMDAFDQNKPIPTMDLPST 62

Query: 52  PSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAE 111
           PS +M+P  + P + P K+T+NF +P+  +    EVD V++PA++G  GVLPGHVPT+A+
Sbjct: 63  PSNFMSPEREVPATPPEKMTLNFYMPHEIQFKDAEVDQVMIPATSGDFGVLPGHVPTVAQ 122

Query: 112 LKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQ 170
           L+PGV+SV  + ++T+KYFVSSGFAF+HANSV DI+AVEA+P++Q+D + V+KGLA+FN 
Sbjct: 123 LRPGVVSVQLNSSETQKYFVSSGFAFVHANSVTDIMAVEAIPLEQLDDAAVKKGLADFNN 182

Query: 171 KLSSATTDLEKAEAQIGVDVHSALNSALTG 200
           KL +A  D EKA AQIG++V  A+N AL G
Sbjct: 183 KLVNAKDDYEKAAAQIGIEVCGAMNHALEG 212


>gi|255088485|ref|XP_002506165.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
 gi|226521436|gb|ACO67423.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
          Length = 214

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 102/211 (48%), Positives = 141/211 (66%), Gaps = 13/211 (6%)

Query: 2   FRQASRLLA----------RASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPN-MEPPK 50
            RQA+R L           RA AV   RA  S      +V   F++ +K+  P+ M+PP 
Sbjct: 3   LRQAARRLGALAGSSPQVTRAFAVGSQRATMSTEAQRESVKE-FLDKFKQHAPSTMDPPS 61

Query: 51  TPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIA 110
            PS ++ P  + P + P+KLT+NF +P+  E    EVD + +PA TG MGVLPGHVPT+A
Sbjct: 62  FPSDFLPPAREVPATPPAKLTLNFYMPHEIEYEGAEVDSIQLPAVTGDMGVLPGHVPTVA 121

Query: 111 ELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           +L+PGV++V+ D  +TKKYFVSSGFAF+HANSV D++AVEAVP++Q+D   V+K LA++ 
Sbjct: 122 QLRPGVVAVNMDDKETKKYFVSSGFAFVHANSVTDVMAVEAVPVEQLDGEAVKKALADYQ 181

Query: 170 QKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
            KL +A  D EKA AQIG++V  A+ SA+TG
Sbjct: 182 AKLVNAKDDYEKAAAQIGIEVTQAMESAVTG 212


>gi|145350163|ref|XP_001419486.1| F-ATPase family transporter: protons (mitochondrial) [Ostreococcus
           lucimarinus CCE9901]
 gi|144579718|gb|ABO97779.1| F-ATPase family transporter: protons (mitochondrial) [Ostreococcus
           lucimarinus CCE9901]
          Length = 170

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 2/160 (1%)

Query: 41  KVNPNMEPPKTPSVYMT-PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQM 99
           K +P M+ P TP+ + + P  ++      KL +NF LP+      +EVDMV+VPA+TG  
Sbjct: 8   KTSPTMDRPSTPTTFASAPVEESAKGTADKLKLNFYLPHEVAHDEEEVDMVLVPATTGDF 67

Query: 100 GVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDP 158
           G+LPGHVPT+++L+PGV+SVH +  D KKYFVSSGFAF+HA+S ADI A+EAVP++Q+D 
Sbjct: 68  GILPGHVPTVSQLRPGVVSVHLNDKDVKKYFVSSGFAFVHADSTADICAIEAVPVEQLDG 127

Query: 159 SLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
             V+KGLAE   K ++A  D EKA AQIG+DV +A+ +AL
Sbjct: 128 DAVRKGLAEHQAKFTNAKDDFEKANAQIGIDVCNAMVAAL 167


>gi|308807473|ref|XP_003081047.1| putative ATP synthase delta chain, mitochondrial prec (ISS)
           [Ostreococcus tauri]
 gi|116059509|emb|CAL55216.1| putative ATP synthase delta chain, mitochondrial prec (ISS)
           [Ostreococcus tauri]
          Length = 210

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 135/213 (63%), Gaps = 18/213 (8%)

Query: 2   FRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWK--KVNPNMEPPKTPSVYM-TP 58
            R A R++ + ++V   R  S+Q  A+     TF+++++  K +P ME P T S +  TP
Sbjct: 1   MRLARRVVGKNASVP-VRGASTQSRASI---ETFMKNFEQHKTSPTMEHPATSSTFASTP 56

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKE----------VDMVIVPASTGQMGVLPGHVPT 108
             +     P K+ +NF LP+ +     E          VDMV+VPA+TG  GVLPGHVPT
Sbjct: 57  VTEDVKGTPEKMKLNFYLPHDAPFDKTERLTRYDVDAQVDMVLVPATTGDFGVLPGHVPT 116

Query: 109 IAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
           +++L+PGV+SVH    D ++YFVS GF F+HA+S  DI AVEAVP++Q+DP  V+KGLAE
Sbjct: 117 VSQLRPGVVSVHVSDKDVQRYFVSGGFCFVHADSTTDICAVEAVPVEQLDPEAVKKGLAE 176

Query: 168 FNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
              K ++A  D+EKA AQIG+D  +A+ SA+ G
Sbjct: 177 HQAKFANAKDDVEKAHAQIGIDCCNAMVSAIEG 209


>gi|384245874|gb|EIE19366.1| hypothetical protein COCSUDRAFT_48924 [Coccomyxa subellipsoidea
           C-169]
          Length = 206

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 130/209 (62%), Gaps = 16/209 (7%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPN----MEPPKTPSVYM 56
           MFRQ ++ LA     T  R  S+        D    E  KK +P+    + PP  PS ++
Sbjct: 1   MFRQVAQRLA----CTARRGLSTSAVCREG-DKGPAEFLKKFSPHVSSTLSPPSFPSEFL 55

Query: 57  --TPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKP 114
                 +   ++P KLT+NF LP+ + +   +VD+V++PA TG  GV+PGHVPT+A+L+P
Sbjct: 56  PKAKEAEEGAAVPEKLTLNFFLPHETTVKDSKVDLVLLPALTGDFGVMPGHVPTVAQLRP 115

Query: 115 GVLSVHDGNDT--KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKL 172
           GV++VH   D   +KYFVSSGFAF+HA+S  D+ AVEAV ++ +DP  V+ GLAE+  KL
Sbjct: 116 GVVTVHKTLDKEIEKYFVSSGFAFVHADSSTDVCAVEAVKLEDLDPEAVRAGLAEYTAKL 175

Query: 173 SSATT---DLEKAEAQIGVDVHSALNSAL 198
            +      D E A AQIGV+V+SA+N+A+
Sbjct: 176 GALQAKGDDYEIAAAQIGVEVYSAMNAAV 204


>gi|428182069|gb|EKX50931.1| hypothetical protein GUITHDRAFT_151115 [Guillardia theta CCMP2712]
          Length = 171

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 74/134 (55%), Positives = 95/134 (70%), Gaps = 1/134 (0%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGND 124
           IP+KLT N + P+ +  +  EVD VIVP + G  GVLPGHVPTIAEL+PG++ V     D
Sbjct: 34  IPTKLTFNLLAPHKAIFNKAEVDQVIVPGADGMFGVLPGHVPTIAELRPGMVEVTVASGD 93

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
            KKYF+SSGFAF+HANS  D+  VE V +D++DPS V  G +E    LSSAT ++EKA+A
Sbjct: 94  VKKYFLSSGFAFVHANSTLDVCGVEIVQLDELDPSAVSSGKSEAENALSSATDEVEKAKA 153

Query: 185 QIGVDVHSALNSAL 198
           QI VDV++ L  AL
Sbjct: 154 QIAVDVYTTLTEAL 167


>gi|8272402|dbj|BAA96453.1| F1-ATPase [Pyrus pyrifolia]
          Length = 76

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSGFAFIHANS+ADIIAVEAVP+D++D SLVQKGLAEF QKL+SA+TDLEKAEAQI
Sbjct: 3   KYFVSSGFAFIHANSIADIIAVEAVPLDRVDASLVQKGLAEFTQKLNSASTDLEKAEAQI 62

Query: 187 GVDVHSALNSALTG 200
           GVDVHSALNSALTG
Sbjct: 63  GVDVHSALNSALTG 76


>gi|452820732|gb|EME27771.1| F-type H+-transporting ATPase subunit delta [Galdieria sulphuraria]
          Length = 163

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 93/130 (71%), Gaps = 1/130 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL ++F  P ++      VDMV+ PA+TG MGVLP HVPT+A+LKPGV++V +     KY
Sbjct: 33  KLKLSFATPTSALRKDASVDMVVFPAATGMMGVLPQHVPTVAQLKPGVVTVIEEGKEDKY 92

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVSSGFAF+  +   DI+AVEAV ++ +D   VQ+GL+E    ++SA+ ++ +A AQIGV
Sbjct: 93  FVSSGFAFVTQDRT-DILAVEAVRLEDLDKEAVQRGLSECESAINSASDEVSQAIAQIGV 151

Query: 189 DVHSALNSAL 198
           +VHSA+ SAL
Sbjct: 152 EVHSAMKSAL 161


>gi|301109876|ref|XP_002904018.1| ATP synthase subunit delta', putative [Phytophthora infestans
           T30-4]
 gi|262096144|gb|EEY54196.1| ATP synthase subunit delta', putative [Phytophthora infestans
           T30-4]
          Length = 169

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 3/134 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           K+T+N   PY +     EVD+V +P   G+ GV  GH P +A+LKPGV+ VH     D +
Sbjct: 33  KVTLNLTTPYQAFYKGAEVDLVQIPGVIGEYGVTAGHTPVLAQLKPGVIQVHVEREKDVQ 92

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA-TTDLEKAEAQ 185
            +F + GFA  HANSV DI  VE V ++ IDP   Q GL ++  +L+SA     EK  AQ
Sbjct: 93  SFFTAGGFALTHANSVTDIACVELVKVEDIDPEAAQAGLTKYQSQLASAPEGSEEKLNAQ 152

Query: 186 IGVDVHSALNSALT 199
           IGVD H+A+ +A+T
Sbjct: 153 IGVDTHAAMVAAVT 166


>gi|328867932|gb|EGG16313.1| ATP synthase F1 delta [Dictyostelium fasciculatum]
          Length = 177

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
           LT +F++P+      K+V M+ +P +   MGVL  HVP IAELKPGV+++ HD N T+ Y
Sbjct: 37  LTFSFMVPHQVIFKDKKVQMITLPGAKSVMGVLKHHVPNIAELKPGVVAIQHDANTTENY 96

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F+S GFAFI+ ++   + AVEAVP+DQIDP+ V+ GL ++ Q  + A  + +KA A IG+
Sbjct: 97  FISGGFAFINPDASCYVNAVEAVPLDQIDPTEVKNGLQKYTQLYNEAVDEKDKAIALIGL 156

Query: 189 DVHSALNSAL 198
           + H  +  A+
Sbjct: 157 ETHQHMAHAV 166


>gi|388851677|emb|CCF54673.1| probable ATP synthase delta chain precursor, mitochondrial
           [Ustilago hordei]
          Length = 169

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 95/150 (63%)

Query: 49  PKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPT 108
           P +P   +  R     ++  KL ++F+LP+ +  ++ EV  V + +STG MG+L  HVP 
Sbjct: 17  PISPLAQIGARRGYAEAVSDKLKLSFILPHEAIYNSTEVTQVNIASSTGDMGILASHVPA 76

Query: 109 IAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
           + EL+PGVL V + + TKK+FVS GFA +H N+   + A+EA P++Q  P  V+  L+E 
Sbjct: 77  VEELRPGVLEVVESSGTKKWFVSGGFATVHPNNKLVVNAIEAYPLEQFSPEAVRSALSEA 136

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  SS ++   KAE++I ++V++AL +AL
Sbjct: 137 QRVASSGSSAEAKAESEIEIEVYTALQAAL 166


>gi|224072494|ref|XP_002335921.1| predicted protein [Populus trichocarpa]
 gi|222836388|gb|EEE74795.1| predicted protein [Populus trichocarpa]
          Length = 95

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/94 (60%), Positives = 71/94 (75%), Gaps = 7/94 (7%)

Query: 1  MFRQASRLLARASAVTR-------SRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPS 53
          M RQASRLL R+ A T+       +R  S+ +P  P  DS F+ESWKKV PN++PPKTPS
Sbjct: 1  MLRQASRLLTRSIATTQQPIRVMGARPMSTNLPDTPVQDSAFIESWKKVAPNIDPPKTPS 60

Query: 54 VYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEV 87
           +M PRP TP++IPSK+TVNFVLPYASEL++KEV
Sbjct: 61 AFMKPRPPTPSTIPSKITVNFVLPYASELTSKEV 94


>gi|134108712|ref|XP_777009.1| hypothetical protein CNBB5350 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259692|gb|EAL22362.1| hypothetical protein CNBB5350 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 168

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 2/154 (1%)

Query: 48  PPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVP 107
           P +  ++ +  R     +   KL ++ VLP+ S  S+  V  V +PA+TG MG+L  HVP
Sbjct: 14  PRQASALRIARRGYAEAATDGKLQLSLVLPHQSLYSSSGVIQVNIPAATGDMGILANHVP 73

Query: 108 TIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGL 165
           ++  L+PGV+ V   +G   KK+FVS+GFA +H N+   I AVEA  +D+  P  ++  L
Sbjct: 74  SVEALRPGVIEVIEENGQQGKKWFVSAGFATVHGNNALTINAVEAYSLDKFSPESIKSAL 133

Query: 166 AEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           A+ N+ L S   + EKAEA+I VDV+  L +AL+
Sbjct: 134 ADANRVLGSNAPESEKAEARIEVDVYEGLQAALS 167


>gi|449017837|dbj|BAM81239.1| mitochondrial F-type ATPase F1 subunit delta, precursor
           [Cyanidioschyzon merolae strain 10D]
          Length = 185

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 92/142 (64%), Gaps = 10/142 (7%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTK 126
            ++T+NF  P+      ++V  VIVPA++G MG+LP HVPT+A+++PGV++ + DG   +
Sbjct: 43  GRVTLNFFCPHQVIAKNRQVVSVIVPAASGLMGILPNHVPTVAQMRPGVVTIIGDGGAEE 102

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKL-------SSATTDL 179
           +YFVSSGF F+H +   DI AVEAV +  IDP  V K LA+   KL       ++ T + 
Sbjct: 103 RYFVSSGFTFVHPDRT-DICAVEAVRVSDIDPEEVSKALADCEAKLASSSSSAAAGTAEA 161

Query: 180 EKAE-AQIGVDVHSALNSALTG 200
           ++A  AQIGVDV+ A+   ++G
Sbjct: 162 QRAAVAQIGVDVYLAMQGVVSG 183


>gi|302832159|ref|XP_002947644.1| hypothetical protein VOLCADRAFT_109632 [Volvox carteri f.
           nagariensis]
 gi|300266992|gb|EFJ51177.1| hypothetical protein VOLCADRAFT_109632 [Volvox carteri f.
           nagariensis]
          Length = 202

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 8/202 (3%)

Query: 1   MFRQASR-LLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPN-MEPPKTPSVY--M 56
           M R A+R LLA       + A S +    PA    F E+W K  P+ +  P+ PS +  +
Sbjct: 1   MLRNAARRLLAVGQRSISTSAKSLEEAVIPAGPKEFAEAWNKKAPSTLAVPELPSNFTNV 60

Query: 57  TPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGV 116
           +  PQT   +     VNF  P++      + D V +P   G  G+   HVP IA+L+PG+
Sbjct: 61  STEPQTQGDL---FPVNFYTPHSVLSDGAKKDGVTLPGIDGYFGIKANHVPIIAQLRPGI 117

Query: 117 LSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           + +  G DT+K+F+S GFAF+H N VADI A+EA  +DQ DP+ V+  LA          
Sbjct: 118 VELSSGPDTEKFFISGGFAFVHPNGVADICALEAGTLDQFDPAQVKSALAAATSAQGQG- 176

Query: 177 TDLEKAEAQIGVDVHSALNSAL 198
            + ++A  +  ++++ AL+SAL
Sbjct: 177 DEYDQAANRAALELYGALDSAL 198


>gi|291234865|ref|XP_002737363.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           delta subunit-like [Saccoglossus kowalevskii]
          Length = 170

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 7/136 (5%)

Query: 67  PSKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN 123
           PS+++  F  P   Y +E   K+VD   VP++TG  G+L  HVP ++ L+PG + V+D +
Sbjct: 36  PSQMSFTFATPSEVYYNEADVKQVD---VPSTTGDFGILAQHVPVLSVLRPGCVVVYDND 92

Query: 124 -DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
            +T+KYFVSSG   ++ +S   ++A EA PIDQID    + GL++  Q L S+TTDL KA
Sbjct: 93  GNTEKYFVSSGTITVNDDSSVQLLAEEATPIDQIDRQAAETGLSKAQQDLQSSTTDLAKA 152

Query: 183 EAQIGVDVHSALNSAL 198
           EAQI +++H AL  AL
Sbjct: 153 EAQISLELHEALLKAL 168


>gi|348667962|gb|EGZ07787.1| hypothetical protein PHYSODRAFT_288955 [Phytophthora sojae]
          Length = 169

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 3/126 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           K+T+N   PY +     EVD+V +P   G+ GV  GH P +A+LKPGV+ VH     D +
Sbjct: 33  KVTLNLTTPYQAFYKNAEVDLVQIPGVIGEYGVTAGHTPVLAQLKPGVIKVHVEREKDVQ 92

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA-TTDLEKAEAQ 185
            +F + GFA  HANSV DI  VE V ++ IDP   Q GL ++  +L+SA     EK  AQ
Sbjct: 93  SFFTAGGFALTHANSVTDIACVELVKVEDIDPEAAQAGLTKYQAQLASAPEGSEEKLNAQ 152

Query: 186 IGVDVH 191
           IGVD H
Sbjct: 153 IGVDTH 158


>gi|281200845|gb|EFA75061.1| ATP synthase F1 delta [Polysphondylium pallidum PN500]
          Length = 176

 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 82/126 (65%), Gaps = 1/126 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKY 128
           L+ +F++P+      K+V M+ +P + G  GVL  H+P IAELKPGV+ VH +  D  KY
Sbjct: 43  LSFSFMVPHQILFKNKKVQMLTLPGARGVFGVLKNHIPKIAELKPGVVQVHHESGDVDKY 102

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F+S GFAFI+ ++   I AVEAVP+DQ+D + V+ GLA + Q  + A+ +  KA A IG+
Sbjct: 103 FISGGFAFINPDASCYINAVEAVPVDQLDANEVKNGLARYTQLYNEASDEAAKATALIGL 162

Query: 189 DVHSAL 194
           + H  +
Sbjct: 163 EAHQQM 168


>gi|388580021|gb|EIM20339.1| putative ATP synthase delta chain mitochondrial precursor [Wallemia
           sebi CBS 633.66]
          Length = 159

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/131 (45%), Positives = 87/131 (66%), Gaps = 2/131 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKK 127
           KL + F LP+ +    KEV  V VPA TG+MG+L  HVP++  LK GV+ V +    +KK
Sbjct: 29  KLKLKFALPHETLYQDKEVIQVSVPAETGEMGILSHHVPSVEALKSGVVEVIEAAGQSKK 88

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YF+SSGFA +H N+   I AVEA  +   D S +++G+ +  QKL ++ +++EKAEA+I 
Sbjct: 89  YFISSGFASVHPNNTLTINAVEAFELSAFDKSAIKQGIQD-AQKLKASGSEVEKAEAEIE 147

Query: 188 VDVHSALNSAL 198
           +DV+S L +AL
Sbjct: 148 LDVYSELEAAL 158


>gi|325192615|emb|CCA27041.1| ATP synthase subunit delta' putative [Albugo laibachii Nc14]
          Length = 170

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 3/133 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           K+T+N   PY       +VD++ +P + G+ GV  GH P I+++KPGV+ VH     D +
Sbjct: 34  KITLNLSTPYQCFFKETQVDLIQIPGAVGEYGVTAGHTPIISQMKPGVIKVHVEREKDVQ 93

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT-DLEKAEAQ 185
            +F + GFAF HA+SV DI  VE + ++ ID    + GL  +   +++A     EK EAQ
Sbjct: 94  TFFTAGGFAFTHADSVTDIACVELIKLEDIDRDAAEAGLNNYKSIVATAADGSAEKIEAQ 153

Query: 186 IGVDVHSALNSAL 198
           IG++ H AL SAL
Sbjct: 154 IGLETHQALASAL 166


>gi|384493065|gb|EIE83556.1| hypothetical protein RO3G_08261 [Rhizopus delemar RA 99-880]
          Length = 163

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 5/155 (3%)

Query: 46  MEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGH 105
           ++P +    Y +  P +  +    L + FV+P+ S   A  V  V + A++G MG+L  H
Sbjct: 12  VKPARLARFYASEAPASSDA----LRLTFVVPHKSIYKAATVQQVNLAATSGDMGILANH 67

Query: 106 VPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKG 164
           VP+I +L PG++ V +  + TKK+FVS GFA I+ +S  +I AVEA P++++    VQ G
Sbjct: 68  VPSIEQLNPGIIEVIESAEITKKFFVSGGFATINPDSTLNINAVEASPLEELSLERVQAG 127

Query: 165 LAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           LAE  +  +SA++D EKA A+I V+V+ AL  ALT
Sbjct: 128 LAEAQRNAASASSDKEKAVAKIEVEVYEALQHALT 162


>gi|392577138|gb|EIW70268.1| hypothetical protein TREMEDRAFT_56865 [Tremella mesenterica DSM
           1558]
          Length = 166

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           KL ++ VLP+ S  S+  V  V + A++G MG+L GHVP +  L+PGV+ V  +G  TKK
Sbjct: 34  KLKLSLVLPHQSLYSSVAVTQVNLSAASGDMGILAGHVPVVEALRPGVIEVIEEGGSTKK 93

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F S+GFA +H N++  I AVEA P++      V+ GLA+ N+ LSSA  D EKAEA + 
Sbjct: 94  WFASTGFATMHENNMLTINAVEAYPLENFSLENVRAGLADANRVLSSAAPDAEKAEAGVE 153

Query: 188 VDVHSALNSAL 198
           + V  AL +AL
Sbjct: 154 LVVFEALQAAL 164


>gi|384501195|gb|EIE91686.1| hypothetical protein RO3G_16397 [Rhizopus delemar RA 99-880]
          Length = 163

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 5/155 (3%)

Query: 46  MEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGH 105
           ++P +    Y +  P +  +    L + FV+P+ S   A  V  V + A++G MG+L  H
Sbjct: 12  VKPVRLARFYASEAPASTDA----LRLTFVVPHKSIYKATTVQQVNLAATSGDMGILANH 67

Query: 106 VPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKG 164
           VP+I +L PGV+ V +  + TKK+FVS GFA I+ +S  ++ AVEA  ++++    VQ G
Sbjct: 68  VPSIEQLNPGVIEVIESAEVTKKFFVSGGFATINPDSTLNVNAVEAFSLEELSLERVQAG 127

Query: 165 LAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           LAE  +  +SA++D EKA A+I VDV+ AL  ALT
Sbjct: 128 LAEAQRNAASASSDKEKAVAKIEVDVYEALQHALT 162


>gi|440796998|gb|ELR18093.1| ATP synthase, Delta/Epsilon chain, betasandwich domain containing
           protein [Acanthamoeba castellanii str. Neff]
          Length = 191

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 86/135 (63%), Gaps = 5/135 (3%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT--- 125
           KL      P+ + ++A+ V +  VP++TG MG+L  HVPTIA+LKPGV+ V   +++   
Sbjct: 55  KLIFTLACPHETLINAEPVRIATVPSATGDMGILAHHVPTIAQLKPGVVKVTKFDESGAT 114

Query: 126 --KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
               YF+S GF  ++ +S  ++  VEA P+DQ+DP   +KGL +F ++L+SA+    K  
Sbjct: 115 RDADYFISGGFVTVYPDSHCNVNVVEAFPLDQLDPEKAKKGLEDFTKELASASDAEAKTV 174

Query: 184 AQIGVDVHSALNSAL 198
           A IGV+V+ A+ SAL
Sbjct: 175 ATIGVEVYKAMCSAL 189


>gi|427786617|gb|JAA58760.1| Putative atp synthase h+ transporting mitochondrial f1 complex
           delta subunit precursor [Rhipicephalus pulchellus]
          Length = 166

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 11/154 (7%)

Query: 55  YMTPRP--------QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHV 106
           Y+ PR         Q+ T    ++ + F  P  +     +V  V VP+ +G  G+LP HV
Sbjct: 13  YVLPRTRLLASQSVQSRTYADGQMPLTFSSPAETFYDKVDVKQVDVPSYSGNFGILPNHV 72

Query: 107 PTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKG 164
           P +A +KPGV++V   DG + KKYFVSSG   I+ +S   ++A  AVP+D++DP L + G
Sbjct: 73  PALAVIKPGVVTVFPKDG-EAKKYFVSSGTISINEDSSVQVLAEAAVPVDRLDPQLCRDG 131

Query: 165 LAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           L +  Q L SA++D  +AEAQI V+VH AL  AL
Sbjct: 132 LTKAQQALQSASSDTARAEAQIEVEVHEALVKAL 165


>gi|298710990|emb|CBJ32297.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 169

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 3/145 (2%)

Query: 57  TPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGV 116
           T R  +    P+ + +NF LP+ +    K+VD VI+P S G+ GV  GH P +AELKPGV
Sbjct: 19  TARCFSTAEAPAVMKLNFCLPHETIYKDKDVDQVIIPGSAGEYGVTAGHSPIVAELKPGV 78

Query: 117 LS-VHD-GNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           +  VH+ G + + +FVS+GFA  H  SV DI A+EAV +++ID   V+       +++ +
Sbjct: 79  VQVVHEAGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDA 138

Query: 175 ATT-DLEKAEAQIGVDVHSALNSAL 198
           AT    E AEAQ+ V+   A+ +A+
Sbjct: 139 ATEGSREAAEAQVAVETTKAMAAAI 163


>gi|320169944|gb|EFW46843.1| ATP synthase subunit delta [Capsaspora owczarzaki ATCC 30864]
          Length = 163

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 84/130 (64%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           K+ + F  P  S  +AK +  V VPA++G  G+L  HVPTIA L+PGV++V +     K+
Sbjct: 33  KVRLTFSTPDGSFFNAKAITQVNVPATSGDFGILVNHVPTIACLRPGVVTVVEDGKESKF 92

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVSSG   ++ +S   I+A EA P+DQ D +  + GL +  Q+ +SA  D ++A+A+IGV
Sbjct: 93  FVSSGTVTVNNDSSVQIVAEEAAPLDQFDAAAAKSGLDQATQRAASAGNDADRAKAEIGV 152

Query: 189 DVHSALNSAL 198
           +V+ AL +AL
Sbjct: 153 EVYRALVTAL 162


>gi|260908550|gb|ACX53994.1| ATP synthase H+ transporting mitochondrial F1 complex delta subunit
           precursor [Rhipicephalus sanguineus]
          Length = 166

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 11/154 (7%)

Query: 55  YMTPRP--------QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHV 106
           Y+ PR         Q+ T    ++ + F  P  +     +V  V VP+ +G  G+LP HV
Sbjct: 13  YVLPRARLLASQSVQSRTYADGQMPLTFASPAETFYDKVDVKQVDVPSYSGFFGILPNHV 72

Query: 107 PTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKG 164
           P +A +KPGV++V   DG + KKYFVSSG   I+ +S   ++A  AVP+D++DP L + G
Sbjct: 73  PALAVIKPGVVTVFPKDG-EAKKYFVSSGTISINEDSSVQVLAEAAVPVDRLDPQLCRDG 131

Query: 165 LAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           L +  Q L SA++D  +AEAQI V+VH AL  AL
Sbjct: 132 LTKAQQALQSASSDTARAEAQIEVEVHEALIKAL 165


>gi|126697378|gb|ABO26646.1| mitochondrial ATP synthase delta chain [Haliotis discus discus]
          Length = 165

 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 85/123 (69%), Gaps = 6/123 (4%)

Query: 78  YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFA 135
           Y +E   K+VD   VPA +G  G+LP HVP++A LKPGV++V+  DG+ TKK FVSSG  
Sbjct: 46  YYNEAKVKQVD---VPALSGSFGILPDHVPSLAVLKPGVVTVYEEDGS-TKKVFVSSGSI 101

Query: 136 FIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
            I+ +S   ++A EA P+D++D S ++ GLA+  Q  +SAT+D  KAEAQI ++ + AL+
Sbjct: 102 TINEDSSVQVLAEEAHPVDRLDASTIRDGLAKAQQDFNSATSDKAKAEAQISLECYEALS 161

Query: 196 SAL 198
            AL
Sbjct: 162 KAL 164


>gi|294494195|gb|ADE92943.1| mitochondrial ATP synthase subunit delta [Polytomella sp.
           Pringsheim 198.80]
 gi|315075276|tpg|DAA33940.1| TPA_inf: mitochondrial ATP synthase subunit delta [Polytomella
           parva]
          Length = 199

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)

Query: 35  FVESWKKVNPN-MEPPKTPSVYMTPRPQTPTSIPSK-LTVNFVLPYASELSAKEVDMVIV 92
           F E W K  P+ +  P+ PS Y   +      +      VNF  P+ S LS  + D V++
Sbjct: 33  FTEVWNKKAPSTLIVPEFPSNYTAVKAVGEGQVHGDAFPVNFYTPH-SILSQAQKDTVVL 91

Query: 93  PASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVP 152
           P   G  GV   HVPTIA+LKPGV+ +H G +++K+FVS GFAF+H N V DI  +EA  
Sbjct: 92  PGVDGYFGVKASHVPTIAQLKPGVVELHSGAESEKFFVSGGFAFVHPNGVTDICVLEAAT 151

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           +DQ+DP+ V+  LA      +  T + E+A  +  ++++SAL SA+
Sbjct: 152 LDQVDPAAVKSALA--AASAAQPTDEFEQAANRAAIELYSALESAV 195


>gi|159481338|ref|XP_001698736.1| mitochondrial F1F0 ATP synthase, delta subunit [Chlamydomonas
           reinhardtii]
 gi|158273447|gb|EDO99236.1| mitochondrial F1F0 ATP synthase, delta subunit [Chlamydomonas
           reinhardtii]
          Length = 202

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 4/200 (2%)

Query: 1   MFRQASR-LLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPN-MEPPKTPSVYMTP 58
           M R A+R L+A       + A + +  A PA    F E+W K  P+ +  P+ PS +   
Sbjct: 1   MLRNAARRLMAVGQRGISTSAMTMEEVAVPAGPKEFTEAWNKKAPSQLLVPELPSNFTNV 60

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
                T       VNF  P +      + D V +P   G  GV   HVP IA+L+PG++ 
Sbjct: 61  SADNQTQ-GDLFPVNFYTPSSVLADGVKKDGVTLPGIDGYFGVKANHVPVIAQLRPGIVE 119

Query: 119 VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +  G DT+K+F++ GFAF+H N VADI A+EA  +DQ DP+ V+  LA  N        +
Sbjct: 120 LSSGADTEKFFIAGGFAFVHPNGVADICALEAGTLDQFDPAAVKSALAAANSAQGQG-DE 178

Query: 179 LEKAEAQIGVDVHSALNSAL 198
            ++A  +  +++++AL+SAL
Sbjct: 179 YDQAANRAALELYAALDSAL 198


>gi|164660658|ref|XP_001731452.1| hypothetical protein MGL_1635 [Malassezia globosa CBS 7966]
 gi|159105352|gb|EDP44238.1| hypothetical protein MGL_1635 [Malassezia globosa CBS 7966]
          Length = 169

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 91/136 (66%), Gaps = 1/136 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND 124
           ++  KL ++FVLP+++  +A+EV  V VPA +G +G+L  HVPT+ +++PGVL V + + 
Sbjct: 32  AVSDKLKLSFVLPHSALYNAQEVTQVNVPAISGDLGILSAHVPTVEQIRPGVLEVIESSG 91

Query: 125 T-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           T KK+FVSSGFA IH ++   +  +EA  +D+     V++GLAE  +  S   +  EKA 
Sbjct: 92  TSKKFFVSSGFATIHPDNHLTVNTIEAYTLDKFSQESVRQGLAEAQRVASGNGSPEEKAA 151

Query: 184 AQIGVDVHSALNSALT 199
           A+I V+V SA+ +AL+
Sbjct: 152 AEIEVEVFSAIQAALS 167


>gi|390602282|gb|EIN11675.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Punctularia strigosozonata HHB-11173 SS5]
          Length = 162

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 88/150 (58%), Gaps = 1/150 (0%)

Query: 50  KTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           + P+     R     ++ +KL ++  LP+ +  ++ +V  V + A+TG MGVL  HVPT+
Sbjct: 13  RAPATLAAQRRGYAEAVSNKLKLSLALPHQAIYTSTDVTQVNLSAATGDMGVLANHVPTV 72

Query: 110 AELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
             L+PG++ V      +KK+FVS GFA +H N+   I AVEA PI+      V+  LAE 
Sbjct: 73  EALRPGIVEVVESAGSSKKWFVSGGFAIVHPNNKMTINAVEAAPIEDFSLEAVRANLAEA 132

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           N+ L+ + ++ +KAEA+I  DV+ A+   L
Sbjct: 133 NKVLAGSGSEEDKAEARIEADVYEAIQRHL 162


>gi|256086218|ref|XP_002579299.1| ATP synthase delta chain mitochondrial [Schistosoma mansoni]
 gi|238664726|emb|CAZ35538.1| ATP synthase delta chain, mitochondrial,putative [Schistosoma
           mansoni]
          Length = 161

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 90/143 (62%), Gaps = 9/143 (6%)

Query: 61  QTPTSIPSKLTVNFV---LPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL 117
           QT T   ++L + F      + + ++ K+VD   VP   G+ GVLP HVPT+  LKPG++
Sbjct: 19  QTSTQCLTELKLTFASSGQAFYNNVAVKQVD---VPTLNGRFGVLPEHVPTVGCLKPGIV 75

Query: 118 SV--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           +V  +DGN  KKYFVSSG   ++++S   ++A EA  +DQ+D + V+ G++    +LSSA
Sbjct: 76  AVTENDGN-VKKYFVSSGIVTVNSDSSIQVLAEEAASLDQLDLNAVKDGMSRAQSELSSA 134

Query: 176 TTDLEKAEAQIGVDVHSALNSAL 198
           TT+L K EAQI V+    ++ AL
Sbjct: 135 TTELGKTEAQIAVEAFEEMSRAL 157


>gi|134274665|emb|CAM82775.1| putative ATP synthase [Nidula niveotomentosa]
          Length = 179

 Score =  102 bits (254), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 84/132 (63%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL ++FVLP+ +  ++++V  V +PA +G MG+L  HVP+I  L+PGV+ V +G+ T
Sbjct: 45  VNDKLRLSFVLPHKAIYNSQDVVQVNIPAESGDMGILSNHVPSIEPLRPGVVEVLEGSGT 104

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +K+FVS GFA +H N+   I  VEA P++      V+  L E ++  +   ++ EK EA+
Sbjct: 105 QKFFVSGGFATVHPNNKVTINVVEAAPLEDFSLEAVRANLQEASKAAAGNGSEEEKLEAR 164

Query: 186 IGVDVHSALNSA 197
           I  DV+ AL +A
Sbjct: 165 IEADVYEALQNA 176


>gi|389741600|gb|EIM82788.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Stereum hirsutum FP-91666 SS1]
          Length = 167

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 1/134 (0%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GND 124
           +  K+ ++ VLP+ +  S+ +V  V + A+TG MG+L  HVP++  L+PGV+ V D  N 
Sbjct: 31  VADKIKLSLVLPHQAIFSSTDVVQVNIAAATGDMGILANHVPSLEPLRPGVVEVLDSANS 90

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +KK+FVS GFA +H N+   I AVEA P++      ++  LAE  + LS   ++ +KAEA
Sbjct: 91  SKKWFVSGGFATVHPNNKLTINAVEAAPLEDFSSEAIRANLAEAQKVLSGNGSEEDKAEA 150

Query: 185 QIGVDVHSALNSAL 198
           +I  DV+ AL  A+
Sbjct: 151 RIEADVYEALQHAI 164


>gi|330819010|ref|XP_003291559.1| hypothetical protein DICPUDRAFT_92704 [Dictyostelium purpureum]
 gi|325078261|gb|EGC31922.1| hypothetical protein DICPUDRAFT_92704 [Dictyostelium purpureum]
          Length = 167

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 79/126 (62%), Gaps = 1/126 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
           LT + + P+ +    K+  +V +P + G  G+   HVP I+ELKPG++ + H+  D +K+
Sbjct: 34  LTFSLLSPHQTIYKDKKAQLVTLPGAKGVFGIAKNHVPKISELKPGIVQINHENGDLEKF 93

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS GFAF++ ++   I  +EAVP+DQ+DP+ V+ GLA + Q  + A  +  KA A +G+
Sbjct: 94  FVSGGFAFVNPDASCYINVIEAVPVDQLDPNEVKNGLARYTQLFNEAQDENAKAVALVGL 153

Query: 189 DVHSAL 194
           + H  +
Sbjct: 154 EAHQQM 159


>gi|71005168|ref|XP_757250.1| hypothetical protein UM01103.1 [Ustilago maydis 521]
 gi|46096829|gb|EAK82062.1| hypothetical protein UM01103.1 [Ustilago maydis 521]
          Length = 168

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 2/155 (1%)

Query: 46  MEPPKTPSVY--MTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLP 103
           +   K PS    +  R     ++  KL ++F+LP+ +  ++ EV  V + +STG MG+L 
Sbjct: 11  LRANKAPSALSQLGARRGYAEAVSDKLKLSFILPHEAIYNSTEVTQVNIASSTGDMGILA 70

Query: 104 GHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
            HVP + EL+PGVL V + + +KK+FVS GFA +H N+   + A+EA P+DQ     V+ 
Sbjct: 71  SHVPAVEELRPGVLEVVESSGSKKWFVSGGFATVHPNNKLVVNAIEAYPLDQFSAEAVRS 130

Query: 164 GLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            L+E  +  SS ++   KAEA+I ++V++AL +AL
Sbjct: 131 ALSEAQRVASSGSSAEAKAEAEIEIEVYTALQAAL 165


>gi|169847185|ref|XP_001830304.1| ATP-synthase delta-subunit [Coprinopsis cinerea okayama7#130]
 gi|116508556|gb|EAU91451.1| ATP-synthase delta-subunit [Coprinopsis cinerea okayama7#130]
          Length = 161

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 82/133 (61%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL ++ VLP+ +  ++++V  V +PA +G MG+L  HVP+I  L+PGV+ V + + T
Sbjct: 27  VSDKLKLSLVLPHKAIFTSQDVVQVNIPAESGDMGILANHVPSIESLRPGVVEVMESSGT 86

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +K+FVSSGFA +H N+   I  VEA P++      ++  LAE  +  S   ++  K EA+
Sbjct: 87  QKFFVSSGFATVHPNNKLTINVVEAAPLEDFSLEAIRANLAEATKVASGNGSEEVKTEAR 146

Query: 186 IGVDVHSALNSAL 198
           I  DV+ AL  AL
Sbjct: 147 IEADVYEALQHAL 159


>gi|302680807|ref|XP_003030085.1| hypothetical protein SCHCODRAFT_68954 [Schizophyllum commune H4-8]
 gi|300103776|gb|EFI95182.1| hypothetical protein SCHCODRAFT_68954 [Schizophyllum commune H4-8]
          Length = 163

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 82/131 (62%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           K+ ++ VLP+ +  ++ +V  V + A+TG MG+L  HVP+I  L+PGVL V +G  +KK+
Sbjct: 32  KIKLSLVLPHQAIFTSADVVQVNIAAATGDMGILANHVPSIEPLRPGVLEVLEGAGSKKW 91

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS GFA +H  +   I A+EA P++   P  ++  LAE  +  +   ++ +K EA+I  
Sbjct: 92  FVSGGFATVHPGNKLTINAIEAAPLEDFSPEAIKANLAEAQKVAAGNGSEEDKLEARIEA 151

Query: 189 DVHSALNSALT 199
           DV+ AL  A++
Sbjct: 152 DVYEALQHAVS 162


>gi|336371753|gb|EGO00093.1| hypothetical protein SERLA73DRAFT_180517 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336384507|gb|EGO25655.1| delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase, ATP16 [Serpula lacrymans var. lacrymans S7.9]
          Length = 164

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 86/150 (57%), Gaps = 2/150 (1%)

Query: 50  KTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           + PSV    R +    +  K+ ++ VLP+ +  ++ +V  V V A+TG MG+L  HVP+I
Sbjct: 13  RAPSVLTQAR-RGYAEVSDKIKLSLVLPHQAIFTSTDVVQVNVSAATGDMGILANHVPSI 71

Query: 110 AELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
             L+PGV+ V   GN +KK+FVS GFA +H N+   I  VEA P+D   P  V+  L E 
Sbjct: 72  ETLRPGVVEVIESGNTSKKWFVSGGFANVHPNNKLTINVVEAAPLDSFSPEAVRSNLQEA 131

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  +   ++  K EA+I  DV+ AL  AL
Sbjct: 132 LKVAAGNGSEEVKTEARIEADVYEALQHAL 161


>gi|449546357|gb|EMD37326.1| hypothetical protein CERSUDRAFT_113978 [Ceriporiopsis subvermispora
           B]
          Length = 164

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 82/131 (62%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKK 127
           KL ++ VLP+ +  ++ +V  V +PA+TG MG+L  HV +I  L+PGV+ V D  N +KK
Sbjct: 31  KLKLSLVLPHQALFTSADVVQVNIPAATGDMGILANHVASIEALRPGVVEVLDSTNTSKK 90

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVSSGFA +H N+   I A+EA P++      V+  LAE  +  +   ++ +K EA+I 
Sbjct: 91  WFVSSGFATVHPNNKLTINAIEAAPLEDFSAEAVRANLAEAQKVAAGNGSEEDKMEARIE 150

Query: 188 VDVHSALNSAL 198
            DV+ AL  AL
Sbjct: 151 ADVYEALQHAL 161


>gi|403412398|emb|CCL99098.1| predicted protein [Fibroporia radiculosa]
          Length = 164

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 90/150 (60%), Gaps = 2/150 (1%)

Query: 50  KTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           + P V+ + R +       K+ ++ VLP+ S  ++ EV  V + A+TG MG+L  HVP+I
Sbjct: 13  RAPKVFTSGR-RGYAEAADKIKLSLVLPHQSIFTSTEVVQVNISAATGDMGILANHVPSI 71

Query: 110 AELKPGVLSVHD-GNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
             L+PGV+ V + G+ +KK+FVS GFA +H N+   I AVEA P++   P  ++  L E 
Sbjct: 72  EPLRPGVVEVIEPGSASKKWFVSGGFATVHPNNSLTINAVEAAPLEDFSPEAIRANLQEA 131

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  + + ++ +K EA+I  DV+ AL  AL
Sbjct: 132 LKVAAGSGSEEDKMEARIEADVYEALQHAL 161


>gi|395333158|gb|EJF65536.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Dichomitus squalens LYAD-421 SS1]
          Length = 163

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 82/132 (62%), Gaps = 1/132 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           K++++ VLP+ +  ++ +V  V + A+TG MG+L  H PTI  L+PGV+ V   GN +KK
Sbjct: 31  KISLSLVLPHQAIFTSADVVQVNLAAATGDMGILANHAPTIEPLRPGVVEVIEGGNTSKK 90

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +H N+   I AVEA P+D   P  V+  L E  +  +   ++ +K EA+I 
Sbjct: 91  WFVSGGFATVHPNNKLTINAVEAAPLDAFSPEAVRANLQEALKVAAGNGSEEDKVEARIE 150

Query: 188 VDVHSALNSALT 199
            DV+ AL  AL+
Sbjct: 151 ADVYEALQHALS 162


>gi|391331721|ref|XP_003740291.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Metaseiulus occidentalis]
          Length = 162

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 1/135 (0%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDT 125
           P+ +      P        +V  V VP+ +G  G+LP HV T A +KPGV+ V+    D 
Sbjct: 26  PTGMAFTLASPSNLYFHGADVRQVDVPSYSGNFGILPNHVSTSAVIKPGVVVVYPKEGDL 85

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +++FVS+G   ++ +S   +IA +A+ +DQ+D SLV  GLA+  Q+L+SA+T+  KAEAQ
Sbjct: 86  QRFFVSAGTITVNEDSSVQVIAEQAIAVDQLDGSLVGAGLAKAQQQLASASTETAKAEAQ 145

Query: 186 IGVDVHSALNSALTG 200
           I ++VH A+  A+ G
Sbjct: 146 ILIEVHEAMQKAIDG 160


>gi|402224262|gb|EJU04325.1| ATP-synthase delta-subunit [Dacryopinax sp. DJM-731 SS1]
          Length = 163

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKK 127
           K+ ++ VLPY++  S++EV  V +PA TG MGVL  HV TI  L+PGVL V +    +KK
Sbjct: 32  KIKLSLVLPYSTIFSSEEVTQVNLPAVTGDMGVLANHVATIEPLRPGVLEVIESVGQSKK 91

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVSSG A +H ++   I  +E  P++      V+  LAE  +  +   +++EK EA I 
Sbjct: 92  WFVSSGLATVHPDNTMTINVIEGAPLEDFSAEAVRSNLAEAQRVAAGNGSEVEKVEAGIE 151

Query: 188 VDVHSALNSAL 198
           V+V+ AL +AL
Sbjct: 152 VEVYEALQAAL 162


>gi|66826947|ref|XP_646828.1| ATP synthase F1 delta [Dictyostelium discoideum AX4]
 gi|74859142|sp|Q55F42.1|ATPD_DICDI RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|60475172|gb|EAL73108.1| ATP synthase F1 delta [Dictyostelium discoideum AX4]
          Length = 170

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
           LT + + P+ +    K+  +V +P + G  GV   HVP IAELKPGV+ + H+  D +K+
Sbjct: 37  LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKF 96

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F+S GFAF++ ++   I  +EAVPIDQ+D   V+ GLA + Q  + A  +  KA A IG+
Sbjct: 97  FISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGL 156

Query: 189 DVHSAL 194
           + +  +
Sbjct: 157 ETYQQM 162


>gi|331229697|ref|XP_003327514.1| ATP synthase F1, epsilon subunit [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309306504|gb|EFP83095.1| ATP synthase F1, epsilon subunit [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 176

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 82/131 (62%), Gaps = 2/131 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKK 127
           KL ++ VLP+ +   +  V  V + A +G MGVL  HV +I  LKPGV+ V +G  D+KK
Sbjct: 46  KLQLSLVLPHETIYQSSGVTQVNIAAESGDMGVLANHVASIESLKPGVVEVIEGQGDSKK 105

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +H N++  I AVEA P+D   P   +  L E  + LS+  ++++KAEA I 
Sbjct: 106 WFVSGGFANVHPNNLLTINAVEAYPLDAFSPEAARSALQEAQRALSTG-SEVQKAEAAIE 164

Query: 188 VDVHSALNSAL 198
           V+V  +L +AL
Sbjct: 165 VEVFESLLAAL 175


>gi|358252974|dbj|GAA51151.1| F-type H+-transporting ATPase subunit delta [Clonorchis sinensis]
          Length = 202

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 1/153 (0%)

Query: 49  PKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPT 108
            +  + Y      T + + S+LT+ F        + + V  V VP  TG+ GVL  HVPT
Sbjct: 48  ARRCAFYGLRNLSTSSRVQSELTLTFASTGQVFYNKEVVRQVDVPTLTGRFGVLAEHVPT 107

Query: 109 IAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
           IA L PG++SV + + T K YFVSSG   ++++S   ++A EA  +DQ+D   V++GL  
Sbjct: 108 IACLMPGLVSVTESDGTVKSYFVSSGTVTVNSDSSMQVLAEEAATLDQLDVHAVKEGLTR 167

Query: 168 FNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
              +L SA TD  KAEAQI V+V+  L  A  G
Sbjct: 168 AQAELLSAQTDASKAEAQIAVEVYEELAHATEG 200


>gi|320588087|gb|EFX00562.1| ATP synthase delta mitochondrial [Grosmannia clavigera kw1407]
          Length = 164

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 84/140 (60%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++P K+ ++  LP+ S   +++V  V +PA +G MGVL  HVP+I +LKPGVL 
Sbjct: 24  RRTYADAVPDKINLSLSLPHQSIYKSQDVVQVNIPAESGDMGVLANHVPSIEQLKPGVLE 83

Query: 119 VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           + + + +K+YF+S GFA +  NS   I AVE  P++      V+  LAE  +  S + ++
Sbjct: 84  IIEESGSKQYFLSGGFAVVQPNSHLSINAVEGYPLEDFSVDAVKSQLAEAQKVASGSGSE 143

Query: 179 LEKAEAQIGVDVHSALNSAL 198
            E AEA+I ++V  +L + L
Sbjct: 144 REIAEAKIEIEVLESLQAVL 163


>gi|2493049|sp|Q92196.1|ATPD_AGABI RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|1666267|emb|CAB04785.1| ATP-synthase delta-subunit [Agaricus bisporus]
 gi|426197174|gb|EKV47101.1| ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Agaricus bisporus var. bisporus H97]
          Length = 162

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 82/133 (61%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           I  KL ++  LP+ +  S+++V  V +PA +G MG+L  HVP+I  L+PGV+ V + + +
Sbjct: 28  ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGS 87

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +K+FVS GFA +H N+   I  VEA P++      ++  L E N+  + + ++ +K EAQ
Sbjct: 88  QKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQ 147

Query: 186 IGVDVHSALNSAL 198
           I  +V+ AL  AL
Sbjct: 148 IEAEVYEALQHAL 160


>gi|409080272|gb|EKM80632.1| ATP16 delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Agaricus bisporus var. burnettii JB137-S8]
          Length = 162

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 82/133 (61%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           I  KL ++  LP+ +  S+++V  V +PA +G MG+L  HVP+I  L+PGV+ V + + +
Sbjct: 28  ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGS 87

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +K+FVS GFA +H N+   I  VEA P++      ++  L E N+  + + ++ +K EAQ
Sbjct: 88  QKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQ 147

Query: 186 IGVDVHSALNSAL 198
           I  +V+ AL  AL
Sbjct: 148 IEAEVYEALQHAL 160


>gi|443895327|dbj|GAC72673.1| mitochondrial F1F0-ATP synthase, subunit delta/ATP16 [Pseudozyma
           antarctica T-34]
          Length = 168

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 94/148 (63%)

Query: 51  TPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIA 110
           +P   +  R     ++  KL ++F+LP+ +  ++ EV  V + ASTG MG+L  HVP++ 
Sbjct: 18  SPLAQLGARRGYAEAVSDKLKLSFILPHEAIYNSTEVTQVNIAASTGDMGILASHVPSVE 77

Query: 111 ELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQ 170
           EL+PGVL V + + TKK+FVS GFA +H N+   + A+EA P+D      V+  L+E  +
Sbjct: 78  ELRPGVLEVVESSGTKKWFVSGGFATVHPNNKLVVNAIEAYPLDNFSTEAVRSALSEAQR 137

Query: 171 KLSSATTDLEKAEAQIGVDVHSALNSAL 198
             SS+++   KAEA+I ++V++AL +AL
Sbjct: 138 VASSSSSAEAKAEAEIEIEVYTALQAAL 165


>gi|156382631|ref|XP_001632656.1| predicted protein [Nematostella vectensis]
 gi|156219715|gb|EDO40593.1| predicted protein [Nematostella vectensis]
          Length = 130

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 77/129 (59%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +++ F  P         V  V V  ++G  G+LP HVPT+  +KPGVL+V++G+ + KYF
Sbjct: 1   MSLTFASPTEGFYRDAAVTQVDVSTTSGSFGILPSHVPTLQVIKPGVLTVYEGSTSTKYF 60

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VSSG   ++A+S   I+A EA P+D+ D     K L E  Q+LS A+++ +KA A I V+
Sbjct: 61  VSSGAVTVNADSTVQILAEEAHPLDRFDVQAANKQLEEAQQELSGASSEADKASASIAVE 120

Query: 190 VHSALNSAL 198
              AL  AL
Sbjct: 121 CAEALVKAL 129


>gi|393217450|gb|EJD02939.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Fomitiporia mediterranea MF3/22]
          Length = 164

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 82/131 (62%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           K+ ++ VLP+ +  ++ +V  V + A+TG MG+L  HVP+I  L+PGV+ V   GN+++K
Sbjct: 32  KIKLSLVLPHQTLFASTDVVQVNIAAATGDMGILANHVPSIEPLRPGVVEVIESGNNSQK 91

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +H N+   I AVEA P++      ++  L E  +  S   ++ +KAEAQ+ 
Sbjct: 92  WFVSGGFANVHPNNKLTINAVEAAPLEDFSSEAIRANLTEAQRIASGNGSEEDKAEAQVE 151

Query: 188 VDVHSALNSAL 198
           + V+ +L  AL
Sbjct: 152 ISVYESLQHAL 162


>gi|343426978|emb|CBQ70506.1| probable ATP synthase delta chain precursor, mitochondrial
           [Sporisorium reilianum SRZ2]
          Length = 168

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 94/155 (60%), Gaps = 2/155 (1%)

Query: 46  MEPPKTPS--VYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLP 103
           +   KTPS    +  R     ++  KL ++F+LP+ +   + EV  V + +++G MG+L 
Sbjct: 11  LRATKTPSPLSQLGARRGYAEAVSDKLKLSFILPHQAIYDSTEVTQVNIASASGDMGILA 70

Query: 104 GHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
            HVP + EL+PGVL V + + TKK+FVS GFA +H N+   + A+EA P++      V+ 
Sbjct: 71  SHVPAVEELRPGVLEVVESSGTKKWFVSGGFATVHPNNKLVVNAIEAYPLENFSAEAVRS 130

Query: 164 GLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            L+E  +  SS ++   KAEA+I ++V++AL +AL
Sbjct: 131 ALSEAQRVASSGSSAEAKAEAEIEIEVYTALQAAL 165


>gi|393245019|gb|EJD52530.1| ATP-synthase delta-subunit [Auricularia delicata TFB-10046 SS5]
          Length = 164

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 79/133 (59%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  K+ ++ VLP+ +  S+ +   V + A+TG MG+L  HVP++  L+PGV+ V + + T
Sbjct: 29  VSDKIKLSLVLPHQTIFSSADAVQVNIAAATGDMGILANHVPSVEALRPGVIEVVEASGT 88

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           KK+F S GFA +H N+   I AVEA P++      V+  LAE  +  +    + +K EA 
Sbjct: 89  KKWFASGGFAIVHPNNKLTINAVEAAPLEDFSIEAVRANLAEAQKVANGNGAEEDKLEAS 148

Query: 186 IGVDVHSALNSAL 198
           I VDV+ A+  AL
Sbjct: 149 IEVDVYEAIQHAL 161


>gi|45190599|ref|NP_984853.1| AEL008Wp [Ashbya gossypii ATCC 10895]
 gi|51701327|sp|Q757N0.1|ATPD_ASHGO RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|44983578|gb|AAS52677.1| AEL008Wp [Ashbya gossypii ATCC 10895]
 gi|374108075|gb|AEY96982.1| FAEL008Wp [Ashbya gossypii FDAG1]
          Length = 158

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +NF LP+ +  +   V  V +P  TGQ+G+L  HVP + +L PGV+ V +G+++KK+F
Sbjct: 30  LKLNFALPHETLFAGTAVKQVNLPVKTGQIGILANHVPIVEQLVPGVVEVLEGSESKKFF 89

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GFA +  +S   I +VEA P+D      V+  LAE  QK + A      AEA I ++
Sbjct: 90  VSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAE-AQKNAGAADSRVAAEASIQIE 148

Query: 190 VHSALNSAL 198
           V  AL +AL
Sbjct: 149 VLEALQAAL 157


>gi|380017791|ref|XP_003692828.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Apis
           florea]
          Length = 161

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 91/147 (61%), Gaps = 3/147 (2%)

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAEL 112
           Y+  + +T    P    + F    A+++   E  +  V VP+ +G  G+LP HVPT+A L
Sbjct: 14  YIRNQRRTYADKPISDEMKFTFAGANQVFYDESVIKQVDVPSFSGSFGILPKHVPTLAVL 73

Query: 113 KPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           KPGV++VH+ + + KK FVSSG   I+ N+   I+A EA P++ +D S V++ L++  Q+
Sbjct: 74  KPGVVTVHEEDGSVKKIFVSSGTITINENNSVQILAEEAHPVENLDNSAVRELLSKAQQE 133

Query: 172 LSSATTDLEKAEAQIGVDVHSALNSAL 198
           LSSATT+ +KA A I ++V  AL  A+
Sbjct: 134 LSSATTEQDKAAAAIAIEVSEALVQAV 160


>gi|332374602|gb|AEE62442.1| unknown [Dendroctonus ponderosae]
          Length = 158

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKYFVSSGFAFIHANSV 142
           AK V  V VP+ +G  G+LP HVPT+A LKPGV+SV++   + KK FVSSG   I+ +S 
Sbjct: 42  AKSVRQVDVPSFSGSFGILPKHVPTLAVLKPGVVSVYENEGNVKKIFVSSGTVTINEDSS 101

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
             I+A EA P++ ID S  ++ L +   +LSSA  D  KAEA+I V+V  AL
Sbjct: 102 VQILAEEAHPVENIDASAARELLTKSQSQLSSAANDQAKAEAEIAVEVSEAL 153


>gi|402550248|pdb|4B2Q|H Chain H, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
 gi|402550271|pdb|4B2Q|HH Chain h, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
          Length = 132

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 1/131 (0%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK
Sbjct: 2   SGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKK 61

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  +S   + A+EA P++      ++  LAE  + +SS+    E AEA I 
Sbjct: 62  FFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAR-EAAEAAIQ 120

Query: 188 VDVHSALNSAL 198
           V+V   L S L
Sbjct: 121 VEVLENLQSVL 131


>gi|306991956|pdb|3OE7|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991965|pdb|3OE7|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991974|pdb|3OE7|Z Chain Z, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
          Length = 137

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 1/131 (0%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK
Sbjct: 7   SGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKK 66

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  +S   + A+EA P++      ++  LAE  + +SS+    E AEA I 
Sbjct: 67  FFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAR-EAAEAAIQ 125

Query: 188 VDVHSALNSAL 198
           V+V   L S L
Sbjct: 126 VEVLENLQSVL 136


>gi|401840867|gb|EJT43511.1| ATP16-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 162

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 1/127 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G++TKK+F
Sbjct: 34  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVIEVMEGSNTKKFF 93

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA +  +S   + A+EA P+D      ++  LAE  +  SS+    E AEA I V+
Sbjct: 94  ISGGFATVQPDSQLCVTAIEAFPLDSFSQENIKSLLAEAKKNASSSDAR-EAAEAAIQVE 152

Query: 190 VHSALNS 196
           V   L +
Sbjct: 153 VLEGLQA 159


>gi|365761593|gb|EHN03237.1| Atp16p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 161

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 1/127 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G++TKK+F
Sbjct: 33  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVIEVMEGSNTKKFF 92

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA +  +S   + A+EA P+D      ++  LAE  +  SS+    E AEA I V+
Sbjct: 93  ISGGFATVQPDSQLCVTAIEAFPLDSFSQENIKSLLAEAKKNASSSDAR-EAAEAAIQVE 151

Query: 190 VHSALNS 196
           V   L +
Sbjct: 152 VLEGLQA 158


>gi|328858207|gb|EGG07320.1| hypothetical protein MELLADRAFT_35471 [Melampsora larici-populina
           98AG31]
          Length = 139

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 3/141 (2%)

Query: 54  VYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELK 113
           +Y T  P T ++   KL ++ VLP+ +  S+  V  V + A +G MGVL  HV +I  LK
Sbjct: 1   MYATEAPAT-SAADGKLQLSLVLPHETIFSSSGVTQVNIAAESGDMGVLANHVASIESLK 59

Query: 114 PGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKL 172
           PGV+ V  +  D+KK+FVS GFA +H N+   I AVEA P++       + GL E  + L
Sbjct: 60  PGVVEVIENQGDSKKWFVSGGFANVHPNNSLTINAVEAYPLEAFSAEAARAGLQEAQRAL 119

Query: 173 SSATTDLEKAEAQIGVDVHSA 193
           S+  T+ +KAEA + V+V  A
Sbjct: 120 STG-TEAQKAEAAVEVEVFEA 139


>gi|196008285|ref|XP_002114008.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190583027|gb|EDV23098.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 164

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 75/113 (66%), Gaps = 3/113 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
           S+L + F  P  +  S + V  V VP+ +G  G+LP HVPTIA +KPG+++V+  DG  T
Sbjct: 32  SQLLLTFASPNQAFYSKQNVKQVDVPSFSGNFGILPSHVPTIAVIKPGIVTVYEEDGT-T 90

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
            KYF SSG   ++A+S   I+A EA P+DQ+D    ++GL + NQ+++SA++D
Sbjct: 91  SKYFASSGNISVNADSTVQILAEEACPLDQLDAQAAREGLEKANQQVTSASSD 143


>gi|260832283|ref|XP_002611087.1| hypothetical protein BRAFLDRAFT_70436 [Branchiostoma floridae]
 gi|229296457|gb|EEN67097.1| hypothetical protein BRAFLDRAFT_70436 [Branchiostoma floridae]
          Length = 166

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 72/116 (62%)

Query: 83  SAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           +A  V  + VP  +G +G+LP HVPT+A LKPG L+V +      + VSSG   ++ +S 
Sbjct: 50  AATNVRQIDVPTFSGNIGILPSHVPTLAVLKPGKLTVFEDEAINHFVVSSGSVTVNEDSS 109

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
             I+A EA  ++ +DP L + GL +  Q+L++ATTD E+ EAQ+ V+ H  +  AL
Sbjct: 110 VQILAEEACRLEDVDPQLARSGLEKAQQQLAAATTDAERTEAQVAVEFHEQVVKAL 165


>gi|121703117|ref|XP_001269823.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus clavatus NRRL 1]
 gi|119397966|gb|EAW08397.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus clavatus NRRL 1]
          Length = 165

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS +  P  R     ++P KL ++  LP+ +   +  V  V +PA +G+MGVL  HVP+I
Sbjct: 15  PSAFRAPFQRRGYAEAVPDKLKLSLALPHQTIFKSTGVVQVNIPAESGEMGVLANHVPSI 74

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++  V +G   KK+F+S GFA +  +S   I AVEA P++      V+  +AE 
Sbjct: 75  EQLKPGLVEIVEEGGANKKFFLSGGFAVVQPDSTLSINAVEAFPLEDFSADAVKSQIAEV 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  S + ++ + AEA+I ++V   L + L
Sbjct: 135 QKIASGSGSEQDIAEAKIELEVLETLQAVL 164


>gi|385304069|gb|EIF48104.1| atp synthase delta mitochondrial precursor [Dekkera bruxellensis
           AWRI1499]
          Length = 166

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 82/133 (61%), Gaps = 2/133 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTK 126
           +KL ++  LP+ + L  K+V  V +PA+TG MG+L  HVP I +L+PG++ + D    + 
Sbjct: 34  NKLRLSIALPHQTVLKDKDVFQVNIPAATGDMGILANHVPVIEQLRPGIVEIFDSPXHSD 93

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           K+F+S GFA +  NS  DI++VEA  +   D + V+  L +  + L S   ++  AEA I
Sbjct: 94  KFFISGGFASVMPNSKMDILSVEAAXLKDFDSAAVKSQLXDAKKNLDSTNENV-AAEASI 152

Query: 187 GVDVHSALNSALT 199
            V+V  ALN+AL+
Sbjct: 153 EVEVLEALNAALS 165


>gi|119389911|pdb|2HLD|H Chain H, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389920|pdb|2HLD|Q Chain Q, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389929|pdb|2HLD|Z Chain Z, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|224510815|pdb|3FKS|H Chain H, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510824|pdb|3FKS|Q Chain Q, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510833|pdb|3FKS|Z Chain Z, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|300193122|pdb|2WPD|H Chain H, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|306991983|pdb|3OEE|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991992|pdb|3OEE|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306992001|pdb|3OEE|Z Chain Z, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306992010|pdb|3OEH|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992019|pdb|3OEH|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992028|pdb|3OEH|Z Chain Z, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992037|pdb|3OFN|H Chain H, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992046|pdb|3OFN|Q Chain Q, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|372467212|pdb|3ZRY|H Chain H, Rotor Architecture In The F(1)-C(10)-Ring Complex Of The
           Yeast F-Atp Synthase
 gi|449802277|pdb|3ZIA|H Chain H, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
 gi|449802287|pdb|3ZIA|R Chain R, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
          Length = 138

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 1/131 (0%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK
Sbjct: 8   SGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKK 67

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  +S   + A+EA P++      ++  LAE  + +SS+    E AEA I 
Sbjct: 68  FFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAR-EAAEAAIQ 126

Query: 188 VDVHSALNSAL 198
           V+V   L S L
Sbjct: 127 VEVLENLQSVL 137


>gi|307182759|gb|EFN69882.1| ATP synthase subunit delta, mitochondrial [Camponotus floridanus]
          Length = 162

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 3/110 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           +  V VP+ +G  G+LP HVPT+A LKPGV++V+  DG+ TKK FVSSG   I+ ++   
Sbjct: 49  IRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYEEDGS-TKKVFVSSGTVTINEDNSVQ 107

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           I+A EA P++ ID S  +  L +  Q+LSSATTD +KAEA I V+V  AL
Sbjct: 108 ILAEEAHPVENIDSSAARDILTKAQQQLSSATTDKDKAEAAIAVEVGEAL 157


>gi|322802698|gb|EFZ22922.1| hypothetical protein SINV_15147 [Solenopsis invicta]
          Length = 191

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 3/110 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           +  V VP+ +G  G+LP HVPT+A LKPGV++V+  DG+ TKK FVSSG   I+ +S   
Sbjct: 78  IRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYEEDGS-TKKIFVSSGTVTINEDSSVQ 136

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           I+A EA P++ +D S  +  L +  Q+LSSAT+D++KAEA I V+V  AL
Sbjct: 137 ILAEEAHPLENLDGSAARDVLNKAQQQLSSATSDIDKAEASIAVEVAEAL 186


>gi|6320200|ref|NP_010280.1| F1F0 ATP synthase subunit delta [Saccharomyces cerevisiae S288c]
 gi|2493051|sp|Q12165.1|ATPD_YEAST RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|307568105|pdb|2XOK|H Chain H, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|433620|emb|CAA79912.1| ATP synthase delta subunit [Saccharomyces cerevisiae]
 gi|642802|emb|CAA88057.1| ATP synthase delta subunit [Saccharomyces cerevisiae]
 gi|683693|emb|CAA88355.1| ATP synthase delta subunit (Z21857) [Saccharomyces cerevisiae]
 gi|1430961|emb|CAA98560.1| ATP16 [Saccharomyces cerevisiae]
 gi|45270200|gb|AAS56481.1| YDL004W [Saccharomyces cerevisiae]
 gi|151941986|gb|EDN60342.1| F1F0 ATP synthase delta subunit [Saccharomyces cerevisiae YJM789]
 gi|190405024|gb|EDV08291.1| ATP synthase delta subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256268990|gb|EEU04333.1| Atp16p [Saccharomyces cerevisiae JAY291]
 gi|259145241|emb|CAY78505.1| Atp16p [Saccharomyces cerevisiae EC1118]
 gi|285811020|tpg|DAA11844.1| TPA: F1F0 ATP synthase subunit delta [Saccharomyces cerevisiae
           S288c]
 gi|365766512|gb|EHN08008.1| Atp16p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392300111|gb|EIW11202.1| Atp16p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 160

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK+F
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFF 91

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA +  +S   + A+EA P++      ++  LAE  + +SS+    E AEA I V+
Sbjct: 92  ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAR-EAAEAAIQVE 150

Query: 190 VHSALNSAL 198
           V   L S L
Sbjct: 151 VLENLQSVL 159


>gi|349577067|dbj|GAA22236.1| K7_Atp16p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 160

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 78/129 (60%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G ++KK+F
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGTNSKKFF 91

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA +  +S   + A+EA P++      ++  LAE  + +SS+    E AEA I V+
Sbjct: 92  ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAR-EAAEAAIQVE 150

Query: 190 VHSALNSAL 198
           V   L S L
Sbjct: 151 VLENLQSVL 159


>gi|323305750|gb|EGA59490.1| Atp16p [Saccharomyces cerevisiae FostersB]
          Length = 160

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 78/129 (60%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G ++KK+F
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGXNSKKFF 91

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA +  +S   + A+EA P++      ++  LAE  + +SS+    E AEA I V+
Sbjct: 92  ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAR-EAAEAAIQVE 150

Query: 190 VHSALNSAL 198
           V   L S L
Sbjct: 151 VLENLQSVL 159


>gi|170092345|ref|XP_001877394.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647253|gb|EDR11497.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 163

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 50  KTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           +  + +   R     ++  KL ++  LP+ S  ++++V  V +PA +G MG+L  HVP+I
Sbjct: 12  RRATTFSIARRGYAEAVSDKLKLSLALPHKSIFTSQDVVQVNIPAESGDMGILSNHVPSI 71

Query: 110 AELKPGVLSVHDGN-DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
             ++PGV+ V + N  ++K+FVS GFA +H N+   I  VE  P++      ++  LAE 
Sbjct: 72  EAIRPGVIEVIESNAGSQKFFVSGGFATVHPNNKLTINVVEGAPLEDFSIEAIRSNLAEA 131

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  + + ++ EK EA+I  DV+ +L  AL
Sbjct: 132 LKVAAGSGSEAEKMEARIEADVYESLQHAL 161


>gi|401626365|gb|EJS44314.1| atp16p [Saccharomyces arboricola H-6]
          Length = 160

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PG++ V +G+ +KK+F
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGIVEVIEGSKSKKFF 91

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA +  +S   + A+EA P++      ++  L E  Q +SS+    E AEA I VD
Sbjct: 92  ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKSLLTEAKQNVSSSDAR-EAAEAVIQVD 150

Query: 190 VHSALNSAL 198
           V   L S L
Sbjct: 151 VLENLQSVL 159


>gi|353234328|emb|CCA66354.1| probable ATP synthase delta chain precursor, mitochondrial
           [Piriformospora indica DSM 11827]
          Length = 162

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%)

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
           +T  +   KL ++ V+P+ S +S  EV  V +PA TG MG+L  H P I EL+PGV+ V 
Sbjct: 23  RTYATAADKLKLSLVVPHQSLISGTEVSQVNIPAVTGDMGILSKHEPVIEELRPGVVEVK 82

Query: 121 --DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
             DG  +KK+FVS GFA +H ++   +  VEA P++   P  V+  LAE  +  +    +
Sbjct: 83  TLDGQ-SKKWFVSGGFATMHPHNELTVNVVEAAPLEDFSPEAVRANLAEATRVANGNGPE 141

Query: 179 LEKAEAQIGVDVHSALNSAL 198
            +K EA+I V V  AL  AL
Sbjct: 142 KDKIEARIEVGVLEALQYAL 161


>gi|66517317|ref|XP_625060.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 3
           [Apis mellifera]
 gi|328786450|ref|XP_003250792.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 1
           [Apis mellifera]
          Length = 161

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 3/147 (2%)

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAEL 112
           Y+  + +T    P    + F    A+++   E  +  V VP+ +G  G+LP HVPT+A L
Sbjct: 14  YIRNQRRTYADKPVSDEMKFTFAGANQVFYDESVIKQVDVPSFSGSFGILPKHVPTLAVL 73

Query: 113 KPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           KPGV++V++ + + KK FVSSG   I+ N+   I+A EA P++ +D S +++ L++  Q+
Sbjct: 74  KPGVVTVYEEDGSVKKIFVSSGTVTINENNSVQILAEEAHPVENLDSSAIRELLSKAQQE 133

Query: 172 LSSATTDLEKAEAQIGVDVHSALNSAL 198
           LSSATT+ +KA A I ++V  AL  A+
Sbjct: 134 LSSATTEEDKAAATIAIEVSEALVQAV 160


>gi|429854179|gb|ELA29205.1| ATP synthase delta mitochondrial [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 165

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 86/141 (60%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++P K+ ++  LP+ S  S+K+V  V +PA +G+MGVL  HVP+I +LKPG++ 
Sbjct: 24  RRTYADAVPDKIKLSLSLPHQSIYSSKDVVQVNIPADSGEMGVLANHVPSIEQLKPGLVE 83

Query: 119 -VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
            V +   +K++F+S GFA +  NSV  I A E  PI+      V+  +AE  +  + + +
Sbjct: 84  VVEESGPSKQFFLSGGFAVVQPNSVLSINATEGYPIEDFSAEAVKSQIAEAQKVANGSGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + + AEA+I ++V  +L +AL
Sbjct: 144 EQDIAEAKIELEVLESLQAAL 164


>gi|209738040|gb|ACI69889.1| ATP synthase subunit delta, mitochondrial precursor [Salmo salar]
          Length = 160

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 7/135 (5%)

Query: 68  SKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           S+++  F  P   Y  E S K+VD   VP  TG  G+LP HVPT+  L+PGV++V +D  
Sbjct: 28  SQMSFTFASPTQVYFKEASVKQVD---VPTLTGAFGILPAHVPTLQVLRPGVVTVFNDDG 84

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
              K+FVSSG   ++A+S   ++A EA P+DQ+D +  +  L +   +++SA+ +  +AE
Sbjct: 85  SAAKFFVSSGSITVNADSSVQLLAEEAFPLDQLDVAAAKANLEKAQSEMASASDEAARAE 144

Query: 184 AQIGVDVHSALNSAL 198
            QI +D + A+  AL
Sbjct: 145 VQINIDANEAIVKAL 159


>gi|328786452|ref|XP_003250793.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 2
           [Apis mellifera]
          Length = 174

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 3/147 (2%)

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAEL 112
           Y+  + +T    P    + F    A+++   E  +  V VP+ +G  G+LP HVPT+A L
Sbjct: 27  YIRNQRRTYADKPVSDEMKFTFAGANQVFYDESVIKQVDVPSFSGSFGILPKHVPTLAVL 86

Query: 113 KPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           KPGV++V++ + + KK FVSSG   I+ N+   I+A EA P++ +D S +++ L++  Q+
Sbjct: 87  KPGVVTVYEEDGSVKKIFVSSGTVTINENNSVQILAEEAHPVENLDSSAIRELLSKAQQE 146

Query: 172 LSSATTDLEKAEAQIGVDVHSALNSAL 198
           LSSATT+ +KA A I ++V  AL  A+
Sbjct: 147 LSSATTEEDKAAATIAIEVSEALVQAV 173


>gi|321252504|ref|XP_003192428.1| ATP synthase delta chain, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317458896|gb|ADV20641.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 104

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 2/103 (1%)

Query: 99  MGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQI 156
           MGVL  HVP++  L+PGV+ V   +G   KK+FVS+GFA +H N+   I AVEA P+D+ 
Sbjct: 1   MGVLSNHVPSVEALRPGVIEVIEENGQQGKKWFVSAGFATVHGNNSLTINAVEAYPLDKF 60

Query: 157 DPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
               ++ GLA+ N+ L S   + EKAEA+I VDV+  L +AL+
Sbjct: 61  SLENIKSGLADANRVLGSNAPESEKAEARIEVDVYEGLQAALS 103


>gi|392570392|gb|EIW63565.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Trametes versicolor FP-101664 SS1]
          Length = 163

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 81/132 (61%), Gaps = 1/132 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKK 127
           K+ ++ VLP+ +  ++ +V  V + A++G MG+L  H PTI  L+PGV+ V +G N +KK
Sbjct: 31  KIALSLVLPHQAIFTSADVVQVNLAAASGDMGILANHAPTIEPLRPGVVEVIEGSNQSKK 90

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +H N+   I AVEA P++      V+  L E  +  +   ++ +K EA+I 
Sbjct: 91  WFVSGGFATVHPNNKLTINAVEAAPLEAFSAEAVRANLQEALKVAAGNGSEEDKVEARIE 150

Query: 188 VDVHSALNSALT 199
            DV+ AL  AL+
Sbjct: 151 ADVYEALQHALS 162


>gi|261196376|ref|XP_002624591.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis SLH14081]
 gi|239595836|gb|EEQ78417.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis SLH14081]
 gi|239609410|gb|EEQ86397.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis ER-3]
 gi|327355857|gb|EGE84714.1| ATP synthase F1 epsilon subunit [Ajellomyces dermatitidis ATCC
           18188]
          Length = 165

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 89/151 (58%), Gaps = 3/151 (1%)

Query: 51  TPSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPT 108
           +PS +  P  R     ++  K+ ++ VLP+ S   + +V  V +PA +G MGVL  HVP+
Sbjct: 14  SPSAFRAPLQRRGYADAVADKIKLSLVLPHESIYKSTDVVQVNIPAESGVMGVLANHVPS 73

Query: 109 IAELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
           I +LKPG++  + +   TK++F+S GFA +  +S   I AVE  P+DQ     V+  +AE
Sbjct: 74  IEQLKPGLVEIIEESGGTKQFFLSGGFAIVQPDSQLSINAVEGFPLDQFSAEAVKAQIAE 133

Query: 168 FNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
             +  + + ++ + AEA+I ++V  +L +AL
Sbjct: 134 AQKIANGSGSEQDIAEAKIELEVLESLEAAL 164


>gi|255718953|ref|XP_002555757.1| KLTH0G16632p [Lachancea thermotolerans]
 gi|238937141|emb|CAR25320.1| KLTH0G16632p [Lachancea thermotolerans CBS 6340]
          Length = 214

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  +  +V  V +PA +GQ+G+L  HVPT+ +L  GV+ V +G+ +KK+F
Sbjct: 86  LKLQFALPHQTLFAGSKVTQVNLPAQSGQVGILANHVPTVEQLSAGVVEVFEGSSSKKFF 145

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GFA +  +S   I +VEA P+D      V+  +AE N+  SS+   +  AEA I ++
Sbjct: 146 VSGGFATVQPDSTLSINSVEAFPLDSFSQENVRSLVAEANKNASSSDEKV-AAEAAIQLE 204

Query: 190 VHSALNSAL 198
           V  AL +AL
Sbjct: 205 VLEALQAAL 213


>gi|392593744|gb|EIW83069.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Coniophora puteana RWD-64-598 SS2]
          Length = 165

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 1/150 (0%)

Query: 50  KTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           + P+ +   R     +   ++ ++ VLP+ +  ++ EV  V V A+TG MG+L  HVP+I
Sbjct: 13  RAPASFAVARRGYAEAASDRINLSLVLPHQAIYTSSEVIQVNVAAATGDMGILANHVPSI 72

Query: 110 AELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
             L+PGV+ V   G+ +KK+FVS GFA +H  +   I  VEA P++      V+  L E 
Sbjct: 73  EALRPGVVEVIESGSASKKWFVSGGFANVHPGNKLTINVVEAAPLENFSAEAVRANLQEA 132

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  +   ++ +K EA+I  DV+ AL  AL
Sbjct: 133 LKVAAGNGSEEDKLEARIEADVYEALQHAL 162


>gi|72068590|ref|XP_801793.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Strongylocentrotus purpuratus]
          Length = 173

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 90/139 (64%), Gaps = 7/139 (5%)

Query: 65  SIPSKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-H 120
           S P++++ +F  P   + S  S K+VD   VP+ TG  G+L  HVP++A +KPG++ V  
Sbjct: 37  SAPTQMSFSFGYPGKMFYSNASVKQVD---VPSGTGSFGILAQHVPSLAVMKPGMIFVTE 93

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           D     KYFVSSG   ++ +S   I+A  A P++ +DP  +++G+ +  Q+L++A TDL 
Sbjct: 94  DDGSINKYFVSSGMITVNDDSSVQILAEMAAPVEDLDPQAIKEGMTKAQQELAAAATDLA 153

Query: 181 KAEAQIGVDVHSALNSALT 199
           +AEAQI V+VH A+++A+ 
Sbjct: 154 RAEAQIAVEVHEAMDTAVN 172


>gi|443713752|gb|ELU06452.1| hypothetical protein CAPTEDRAFT_164374 [Capitella teleta]
          Length = 166

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 1/122 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKY 128
           ++  F  P     ++  V  V VP+ TG  G+LP HVP +A LKPGV++V +G+  +KK+
Sbjct: 34  MSFTFASPAEIFYNSANVAQVDVPSMTGSFGILPQHVPALAVLKPGVVTVFEGDGASKKF 93

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVSSG   I+ +S   I+A EAVP++ +D    ++GL+   Q+ +SA+T+  KAEAQI V
Sbjct: 94  FVSSGSITINDDSSVQILAEEAVPVEHLDSQAAREGLSLAQQEAASASTEQAKAEAQIAV 153

Query: 189 DV 190
           + 
Sbjct: 154 EC 155


>gi|76162964|gb|ABA40864.1| SJCHGC07036 protein [Schistosoma japonicum]
          Length = 160

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 87/143 (60%), Gaps = 9/143 (6%)

Query: 61  QTPTSIPSKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL 117
            T T   ++L + F      + + ++ ++VD   VP   G+ GVLP HVPT+  LKPGV+
Sbjct: 18  HTSTQCLAELKLTFASSGQVFYNSVAVRQVD---VPTLNGRFGVLPEHVPTVGCLKPGVV 74

Query: 118 SV--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           ++  +DG+  KKYFVSSG   ++++S   ++A EA  +DQ+D   V+ G++    +LS+A
Sbjct: 75  AITENDGS-MKKYFVSSGIVTVNSDSTMQVLAEEAAALDQLDLQAVKDGVSRAQSELSTA 133

Query: 176 TTDLEKAEAQIGVDVHSALNSAL 198
            T++ K EAQI ++    ++ AL
Sbjct: 134 NTEVGKTEAQIAIEAFEEMSRAL 156


>gi|332022111|gb|EGI62433.1| ATP synthase subunit delta, mitochondrial [Acromyrmex echinatior]
          Length = 163

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 75/109 (68%), Gaps = 1/109 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKYFVSSGFAFIHANSVADI 145
           +  V VP+ +G  G+LP HVPT+A LKPGV+++++ N  +KK FVSSG   I+ ++   I
Sbjct: 50  IRQVDVPSFSGSFGILPKHVPTLAVLKPGVVTIYEENGSSKKIFVSSGTVTINEDNSVQI 109

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           +A EA P++ +D +  +  L +  Q+LSSAT+D++KAEA I V+V  AL
Sbjct: 110 LAEEAHPVEHLDNAAARDILNKAQQELSSATSDIDKAEAGIAVEVAEAL 158


>gi|327296932|ref|XP_003233160.1| ATP synthase F1 epsilon subunit [Trichophyton rubrum CBS 118892]
 gi|326464466|gb|EGD89919.1| ATP synthase F1 epsilon subunit [Trichophyton rubrum CBS 118892]
          Length = 165

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 3/137 (2%)

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDG 122
           T++  KL ++ VLP  +   + +V  V + A +G MG+L  HVP+I +L+PG++ +  +G
Sbjct: 29  TAVADKLKLSLVLPKETIFKSADVVQVNIAAESGDMGILSSHVPSIEQLRPGLIEIIEEG 88

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT-TDLEK 181
             TKK+F++ GFA +  +S  +I AVE  P+D      V+  LAE  Q+L+S T ++ E 
Sbjct: 89  GQTKKFFLAGGFAVMQPDSNLNINAVEGFPLDAFSADNVKSQLAE-AQRLASGTGSEKEI 147

Query: 182 AEAQIGVDVHSALNSAL 198
           AEA+I V+V  +L ++L
Sbjct: 148 AEAKIQVEVLESLQASL 164


>gi|58262728|ref|XP_568774.1| ATP synthase delta chain, mitochondrial precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|57223424|gb|AAW41467.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 104

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 2/103 (1%)

Query: 99  MGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQI 156
           MG+L  HVP++  L+PGV+ V   +G   KK+FVS+GFA +H N+   I AVEA  +D+ 
Sbjct: 1   MGILANHVPSVEALRPGVIEVIEENGQQGKKWFVSAGFATVHGNNALTINAVEAYSLDKF 60

Query: 157 DPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
            P  ++  LA+ N+ L S   + EKAEA+I VDV+  L +AL+
Sbjct: 61  SPESIKSALADANRVLGSNAPESEKAEARIEVDVYEGLQAALS 103


>gi|171685724|ref|XP_001907803.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942823|emb|CAP68476.1| unnamed protein product [Podospora anserina S mat+]
          Length = 164

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 87/149 (58%), Gaps = 2/149 (1%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           P++   P  R     ++  K+ ++  LP+ +   +++V  V +PA +G+MGVL  HVP+I
Sbjct: 15  PALLRAPVQRRGYAEAVSDKIKLSLSLPHQAVYKSQDVVQVNIPAESGEMGVLANHVPSI 74

Query: 110 AELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
            +LKPGV+ + + +  K++F+S GFA +  NSV  I AVE  P++      V+  +AE  
Sbjct: 75  EQLKPGVVEIIEESGNKQFFLSGGFAVVQPNSVLSINAVEGFPLEDFSAEAVRSQIAEAQ 134

Query: 170 QKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           +  S + ++ E AEA+I ++V   L + L
Sbjct: 135 KVASGSGSEQEIAEAKIELEVLETLQAHL 163


>gi|334326702|ref|XP_001374107.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Monodelphis domestica]
          Length = 173

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 9/138 (6%)

Query: 66  IPSKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-- 120
           +P +++  F  P   Y +E + K+VD   VP  +G  G+L  HVPT+  LKPG+++VH  
Sbjct: 39  VPGQMSFTFASPTQVYFNEANVKQVD---VPTQSGAFGILAAHVPTLQVLKPGIVTVHAE 95

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           DG  T KYFVSSG   ++A+S   ++A EAV +D +D    +  L + + +LS A+ +  
Sbjct: 96  DGT-TTKYFVSSGSITVNADSSVQLLAEEAVSLDMLDLGAAKSNLEKAHSELSGASDEAA 154

Query: 181 KAEAQIGVDVHSALNSAL 198
           +AEAQI ++ + A+  AL
Sbjct: 155 RAEAQIRIEANEAIVKAL 172


>gi|50285881|ref|XP_445369.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524673|emb|CAG58275.1| unnamed protein product [Candida glabrata]
          Length = 154

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND 124
           S  S L + F LP+ +  + +EV  V +PA +G +G+L  HVPT+ +L PGV+ V   N+
Sbjct: 21  SAASGLKLRFALPHETLFNGEEVVQVNLPAKSGSIGILANHVPTVEQLTPGVVEVVKANE 80

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           TKKYFVS GFA +  +S   + AVEA P+D      V+  LAE  +K S +  +     A
Sbjct: 81  TKKYFVSGGFAAVQPDSTLCVTAVEAFPLDSFSQDSVRSLLAE-AEKNSKSQDEKTAGVA 139

Query: 185 QIGVDVHSALNSAL 198
            I ++V   L +AL
Sbjct: 140 SIQLEVLEKLQAAL 153


>gi|397569263|gb|EJK46633.1| hypothetical protein THAOC_34688, partial [Thalassiosira oceanica]
          Length = 222

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 2/142 (1%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R  +P      + +NF LP  +   + EV  V+VP + G+  V   HVP +AELK G+L+
Sbjct: 76  RFSSPAPASGLMKLNFNLPQQTLFDSTEVSSVVVPGAMGEYEVTADHVPIVAELKAGMLT 135

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V H G + +KYFV  GF+  H  S  DI+  EAV +D +D S V         + +SA  
Sbjct: 136 VKHGGGEEEKYFVPGGFSLTHEGSTTDIVCPEAVKVDDLDVSAVTANYEAAKSRAASAEA 195

Query: 178 -DLEKAEAQIGVDVHSALNSAL 198
              + AEA I V+V+ A+  AL
Sbjct: 196 GSADAAEAMIEVEVNRAMGGAL 217


>gi|409045074|gb|EKM54555.1| hypothetical protein PHACADRAFT_258487 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 162

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKK 127
           K+ ++ VLP+ +  S+ +V  V +PA+TG MG+L  HV +I  L+PGV+ V D  N +KK
Sbjct: 31  KIRLSLVLPHQAIFSSTDVVQVNLPAATGDMGILANHVASIEALRPGVVEVIDSANASKK 90

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +H N+   +  VEA P++      V+  L E  +  +   ++ +K EA+I 
Sbjct: 91  FFVSGGFATVHPNNKLTVNVVEAAPLESFSAEAVRANLQEAQRVANGNGSEEDKLEARIE 150

Query: 188 VDVHSALNSAL 198
            +V+ AL  AL
Sbjct: 151 TEVYEALQHAL 161


>gi|164422323|gb|ABY55259.1| mitochondrial ATP synthase H+ transporting F1 complex delta subunit
           [Oncorhynchus masou formosanus]
          Length = 160

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 7/135 (5%)

Query: 68  SKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           ++++  F  P   Y  E S K+VD   VP  TG  G+LP HVPT+  L+PGV++V +D  
Sbjct: 28  AQMSFTFASPTQVYFKEASVKQVD---VPTLTGAFGILPAHVPTLQVLRPGVVTVFNDDG 84

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
              K+FVSSG   ++A+S   ++A EA P+DQ+D +  +  L +   +++SA+ +  +AE
Sbjct: 85  SAAKFFVSSGSITVNADSSVQLLAEEAFPLDQLDVAAAKVNLEKAQSEMASASDEAARAE 144

Query: 184 AQIGVDVHSALNSAL 198
            QI +D + A+  AL
Sbjct: 145 VQINIDANEAIVKAL 159


>gi|326476328|gb|EGE00338.1| ATP synthase F1 epsilon subunit [Trichophyton tonsurans CBS 112818]
 gi|326481202|gb|EGE05212.1| ATP synthase F1 epsilon subunit [Trichophyton equinum CBS 127.97]
          Length = 165

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 3/137 (2%)

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDG 122
           T++  KL ++ VLP  +   + +V  V + A +G MG+L  HVP+I +L+PG++ +  +G
Sbjct: 29  TAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLRPGLIEIIEEG 88

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT-TDLEK 181
             TKK+F++ GFA +  +S  +I AVE  P+D      V+  LAE  Q+L+S T ++ E 
Sbjct: 89  GQTKKFFLAGGFAVMQPDSNLNINAVEGFPLDAFSADNVKSQLAE-AQRLASGTGSEKEI 147

Query: 182 AEAQIGVDVHSALNSAL 198
           AEA+I V+V  +L ++L
Sbjct: 148 AEAKIQVEVLESLQASL 164


>gi|358377900|gb|EHK15583.1| hypothetical protein TRIVIDRAFT_38411 [Trichoderma virens Gv29-8]
          Length = 160

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 1/131 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGN 123
           ++P K+ ++  LP+ S   +++V  V +PA +G+MGVL  HVP+I +LKPG++  V +  
Sbjct: 30  AVPDKIKLSLALPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVVEESG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             K++F+S GFA +  NSV  I A EA P++      V+ G+AE  +  S   ++ + AE
Sbjct: 90  PAKQFFLSGGFATVQPNSVLSINAPEAYPLEDFSAEAVRAGIAEAQKVASGNGSEQDIAE 149

Query: 184 AQIGVDVHSAL 194
           A+I ++V  A+
Sbjct: 150 AKIELEVRGAV 160


>gi|259489503|tpe|CBF89828.1| TPA: ATP synthase delta chain, mitochondrial precursor, putative
           (AFU_orthologue; AFUA_1G03100) [Aspergillus nidulans
           FGSC A4]
          Length = 166

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           P+ +  P  R     ++  K+ ++ VLP+ +   + +V  V +PA +G+MGVL  HVP+I
Sbjct: 16  PAAFRVPLQRRGYAEAVNDKIKLSLVLPHQTIFRSTDVVQVNIPAESGEMGVLANHVPSI 75

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++  V +G  +KK+F+S GFA +  +S   I AVE  P++      V+  LAE 
Sbjct: 76  EQLKPGLVEIVEEGGASKKFFLSGGFAVVQPDSQLSINAVEGFPLEDFSAENVRAQLAEA 135

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  S   ++ + AEA+I ++V  +L + L
Sbjct: 136 QKIASGNGSEQDIAEAKIEIEVLESLQAVL 165


>gi|125558409|gb|EAZ03945.1| hypothetical protein OsI_26081 [Oryza sativa Indica Group]
          Length = 718

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 67/120 (55%), Gaps = 14/120 (11%)

Query: 18  SRAFSS-QVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVL 76
           SR  S+ +VPA  A DS F E+WKKV PN+E P TP   M PRP T  +IPSKLTVNFVL
Sbjct: 24  SRVLSTAEVPAEAATDSAFAEAWKKVAPNIETPATPMSLMQPRPPTLAAIPSKLTVNFVL 83

Query: 77  PYASELSAKEVDMV------------IVPASTGQMGVLPGHVPTIAELKPGV-LSVHDGN 123
           PY SE++ KE D               +P  T    +LP  VP+   L   +  ++ DGN
Sbjct: 84  PYKSEIANKEADCYGSWRRQSALAIHHLPMGTIAAKILPWEVPSRETLLRTINAALDDGN 143


>gi|366996667|ref|XP_003678096.1| hypothetical protein NCAS_0I00830 [Naumovozyma castellii CBS 4309]
 gi|342303967|emb|CCC71751.1| hypothetical protein NCAS_0I00830 [Naumovozyma castellii CBS 4309]
          Length = 168

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 83/138 (60%), Gaps = 4/138 (2%)

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--- 120
           ++I + L + F LP+ +     EV  V +PA +G++G+L  H+PT+ +L+PG++ +    
Sbjct: 31  STIGNALRLQFALPHETLYEGAEVKQVNLPAKSGRIGILANHIPTVEQLEPGIVEIFTNA 90

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           + N+ KK+F+S GFA +  +S   + AVEA P+D      V+  L E  + L++  + + 
Sbjct: 91  NNNEVKKFFISGGFATMQPDSTLCVTAVEAFPLDSFSQENVKNLLTEAKKDLNNTDSTI- 149

Query: 181 KAEAQIGVDVHSALNSAL 198
            AEAQI +++  +L +AL
Sbjct: 150 AAEAQIKINLLESLEAAL 167


>gi|254577143|ref|XP_002494558.1| ZYRO0A04312p [Zygosaccharomyces rouxii]
 gi|238937447|emb|CAR25625.1| ZYRO0A04312p [Zygosaccharomyces rouxii]
          Length = 159

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 79/129 (61%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  +  +V  V +PA +G +G+L  HVPT+ +L PGV+ + +G +TKKYF
Sbjct: 31  LKLKFALPHETLFAGTKVTQVNLPAKSGGVGILANHVPTVEQLSPGVVEIFEGANTKKYF 90

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GFA +  +S   + +VEA P++      V+  +++ N+ LSS+   +  A A I ++
Sbjct: 91  VSGGFASVQPDSTLCVTSVEAFPLESFSQENVKSLISDANKNLSSSDEKV-AATAAIQLE 149

Query: 190 VHSALNSAL 198
           V  AL +AL
Sbjct: 150 VLEALQAAL 158


>gi|358059613|dbj|GAA94604.1| hypothetical protein E5Q_01256 [Mixia osmundae IAM 14324]
          Length = 210

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 5/118 (4%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTK 126
           KL ++ VLP+     ++EV  V + A +G MG+L  HVP+I  LKPGV+ V   +G + K
Sbjct: 42  KLRLSLVLPHEVIFESQEVLQVNLAAQSGDMGILANHVPSIESLKPGVVEVIEQNGQEAK 101

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSL---VQKGLAEFNQKLSSATTDLEK 181
           K+FVS GFA IH +++  I AVEA P+DQ    +   +Q   A    K S A TDL+K
Sbjct: 102 KWFVSGGFANIHPSNLLTINAVEAYPLDQFSAEVCFCLQSAPASVKLKRSQAETDLQK 159


>gi|50311439|ref|XP_455744.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|52788272|sp|P78700.2|ATPD_KLULA RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|49644880|emb|CAG98452.1| KLLA0F14773p [Kluyveromyces lactis]
          Length = 159

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S   V  V +PA +GQ+G+L  HVPT+ +L PGV+ V +G+ +KK+F
Sbjct: 31  LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFF 90

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GFA +  +S   I +VEA P++   P  V+  LAE  + +SSA      AEA I ++
Sbjct: 91  VSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSADEV-AAAEAAIQLE 149

Query: 190 VHSALNSAL 198
           V  AL +AL
Sbjct: 150 VLEALQAAL 158


>gi|225677807|gb|EEH16091.1| ATP synthase delta chain [Paracoccidioides brasiliensis Pb03]
 gi|226287456|gb|EEH42969.1| ATP synthase delta chain [Paracoccidioides brasiliensis Pb18]
          Length = 165

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 83/141 (58%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++ VLP+ S   + +V  V +PA +G MG+L  HVP+I +LKPG++ 
Sbjct: 24  RRAYADAVADKIKLSLVLPHESIYKSTDVIQVNIPAESGGMGILANHVPSIEQLKPGLVE 83

Query: 119 -VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
            + +   TK++F+S GFA +  NS   I AVE   +DQ     V+  +AE  +  S + +
Sbjct: 84  IIEESGGTKQFFLSGGFAIVQPNSQLSINAVEGYTLDQFSAEAVKSQIAEAQRIASGSGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + + AEA+I ++V  +L +AL
Sbjct: 144 EQDIAEAKIELEVLESLQAAL 164


>gi|91081977|ref|XP_968285.1| PREDICTED: similar to ATP synthase delta chain, mitochondrial
           [Tribolium castaneum]
 gi|270008191|gb|EFA04639.1| hypothetical protein TcasGA2_TC013931 [Tribolium castaneum]
          Length = 158

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 3/113 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANS 141
           A+ V  V VP+ +G  G+LP HVPT+A LKPGV++V  +DGN  KK FVSSG   I+ +S
Sbjct: 42  AQSVRQVDVPSFSGSFGILPKHVPTLAVLKPGVVTVFENDGN-VKKIFVSSGTVTINEDS 100

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
              ++A EA P++ ID S  ++ L++   +LSSA T+  +AEA I ++V  AL
Sbjct: 101 SVQVLAEEAAPVENIDISAAREILSKAQGELSSAATEQARAEASIAIEVGEAL 153


>gi|295663535|ref|XP_002792320.1| ATP synthase delta chain [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278990|gb|EEH34556.1| ATP synthase delta chain [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 165

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 82/135 (60%), Gaps = 1/135 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGN 123
           ++  K+ ++ VLP+ S   + +V  V +PA +G MG+L  HVP+I +LKPG++  + +  
Sbjct: 30  AVADKIKLSLVLPHESIYKSTDVIQVNIPAESGAMGILANHVPSIEQLKPGLVEIIEESG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            TK++F+S GFA +  NS   I AVE   +DQ     V+  +AE  +  S + ++ + AE
Sbjct: 90  GTKQFFLSGGFAIVQPNSQLSINAVEGYTLDQFSAEAVKSQIAEAQRIASGSGSEQDIAE 149

Query: 184 AQIGVDVHSALNSAL 198
           A+I ++V  +L +AL
Sbjct: 150 AKIELEVLESLQAAL 164


>gi|209736294|gb|ACI69016.1| ATP synthase subunit delta, mitochondrial precursor [Salmo salar]
          Length = 160

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 81/135 (60%), Gaps = 7/135 (5%)

Query: 68  SKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           ++++  F  P   Y  E S K+VD   VP  TG  G+LP HVPT+  L+PGV++V +D  
Sbjct: 28  AQMSFTFASPTQVYFKEASVKQVD---VPTLTGAFGILPAHVPTLQVLRPGVVTVFNDDG 84

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
              K+FVSSG   ++A+S   ++A EA P+DQ+D +  +  L +   +++S + +  +AE
Sbjct: 85  SATKFFVSSGSITVNADSSVQLLAEEAFPLDQLDVAAAKVNLEKAQSEMASVSDEAARAE 144

Query: 184 AQIGVDVHSALNSAL 198
            QI +D + A+  AL
Sbjct: 145 VQINIDANEAIVKAL 159


>gi|348504712|ref|XP_003439905.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Oreochromis niloticus]
          Length = 160

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 43/197 (21%)

Query: 5   ASRLLARASAVTR-SRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTP 63
           A+RLL RA  V R +R ++     AP +  TF                          +P
Sbjct: 3   AARLLRRALPVLRQTRCYAEAASGAPQMSFTFA-------------------------SP 37

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HD 121
           T +           Y  E S K+VD   VP  TG  G+LP HVPT+  L+PGV++V   D
Sbjct: 38  TQV-----------YFKEASVKQVD---VPTLTGAFGILPAHVPTLQVLRPGVVTVFNED 83

Query: 122 GNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
           G+ + KYFVSSG   ++A+S   ++A EA P+DQ+D +  +  L +    L+  T +  +
Sbjct: 84  GS-SAKYFVSSGSVTVNADSSVQLLAEEAFPLDQLDIAAARANLEKAQADLAGTTDEAAR 142

Query: 182 AEAQIGVDVHSALNSAL 198
           AE QI ++ + A+  AL
Sbjct: 143 AEVQISIEANEAIVKAL 159


>gi|238483405|ref|XP_002372941.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus flavus NRRL3357]
 gi|317139836|ref|XP_003189206.1| ATP synthase subunit delta [Aspergillus oryzae RIB40]
 gi|220700991|gb|EED57329.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus flavus NRRL3357]
          Length = 165

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS +  P  R     ++  K+ ++  LP+ +   +  V  V +PA +G+MGVL  HVP+I
Sbjct: 15  PSAFRAPLQRRGYAEAVNDKIKLSLALPHQTIFKSTGVVQVNIPAESGEMGVLANHVPSI 74

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++  V +G  TKK+F+S GFA +  +S   I AVE  P++      V+  +AE 
Sbjct: 75  EQLKPGLVEVVEEGGATKKFFLSGGFAVVQPDSQLSINAVEGFPLEDFSSDAVKNQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  S + ++ + AEA+I ++V   L + L
Sbjct: 135 QKIASGSGSEQDIAEAKIELEVLETLQAHL 164


>gi|169595170|ref|XP_001791009.1| hypothetical protein SNOG_00319 [Phaeosphaeria nodorum SN15]
 gi|160701031|gb|EAT91814.2| hypothetical protein SNOG_00319 [Phaeosphaeria nodorum SN15]
          Length = 165

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKK 127
           K+ ++  LP+ S   +++V  V +PA TG MGVL  HVP+I +LKPG++  + +   +K+
Sbjct: 34  KIKLSLALPHQSIYKSQDVVQVNLPAETGDMGVLANHVPSIEQLKPGLVEIIEEQGGSKQ 93

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  NSV  I AVE  P++      V+  +AE  +  S + ++ + AEA+I 
Sbjct: 94  FFLSGGFATVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGSGSEADIAEAKIE 153

Query: 188 VDVHSALNSAL 198
           ++V  +L +AL
Sbjct: 154 LEVLESLQAAL 164


>gi|345564685|gb|EGX47645.1| hypothetical protein AOL_s00083g153 [Arthrobotrys oligospora ATCC
           24927]
          Length = 169

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           K+ ++  LP+ +   A +V  V +PA +G MGVL  HVP+I +LK G++ +  +G   K+
Sbjct: 37  KIKLSLSLPHQAIYKATDVVQVNIPAESGVMGVLANHVPSIEQLKAGIVDIIEEGGANKQ 96

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +  NS   I AVEA  +D+     V+  LAE N+  S + ++ + AEA+I 
Sbjct: 97  FFVSGGFAVVQPNSRLSINAVEAYTLDEFSLDAVKSQLAEANKIASGSGSEQDIAEAKIE 156

Query: 188 VDVHSALNSAL 198
           V+V   L +AL
Sbjct: 157 VEVLETLQAAL 167


>gi|170052873|ref|XP_001862419.1| ATP synthase delta chain, mitochondrial [Culex quinquefasciatus]
 gi|167873641|gb|EDS37024.1| ATP synthase delta chain, mitochondrial [Culex quinquefasciatus]
          Length = 161

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 73/109 (66%), Gaps = 1/109 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADI 145
           +  V VP+ +G  G+LP HVPT+A LKPGV++V++ +   KK FVSSG   ++ +S   +
Sbjct: 48  IRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYEQDGAVKKVFVSSGTITVNEDSSVQV 107

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           +A EA P++ +D    ++ L+    KLSSA+TD+E+AEA I V+V  AL
Sbjct: 108 LAEEAHPVEDLDAGACRELLSGAQNKLSSASTDVERAEAGIAVEVAEAL 156


>gi|221115652|ref|XP_002167886.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Hydra
           magnipapillata]
          Length = 168

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 74/131 (56%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L++ F  P  +  +   V  V VP+ +G   +L  HVP IA L+PG+L+V      +KYF
Sbjct: 37  LSLTFGTPRETFFNNTVVTQVDVPSGSGNFCILAQHVPIIAVLRPGLLTVTKDGSVEKYF 96

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VSSG   ++ +S A I+A EA P+D+ D +  +K   +    LS A T+  KAEAQI VD
Sbjct: 97  VSSGTITVNKDSTAQILAEEASPLDRFDLNSARKAAEDARSALSIANTEALKAEAQIQVD 156

Query: 190 VHSALNSALTG 200
              AL  AL G
Sbjct: 157 TCDALLFALDG 167


>gi|263173412|gb|ACY69935.1| mitochondrial F1F0-ATP synthase subunit delta/ATP16 [Cimex
           lectularius]
          Length = 161

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 77/119 (64%), Gaps = 6/119 (5%)

Query: 78  YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFA 135
           + S  + K+VD   VP+ +G  G+LP HVPT+A L+PGV++V   DGN +KK FVSSG  
Sbjct: 42  FYSNSNVKQVD---VPSFSGSFGILPNHVPTLAVLRPGVVTVFEQDGN-SKKVFVSSGTV 97

Query: 136 FIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
            I+ +S   ++A EA P++  D S  ++ L +    LS A+++LEKAEA I V+V  AL
Sbjct: 98  TINEDSSVQVLAEEAHPLEDFDLSAAKEQLNKAQADLSRASSELEKAEALIAVEVAEAL 156


>gi|449298646|gb|EMC94661.1| hypothetical protein BAUCODRAFT_111711 [Baudoinia compniacensis
           UAMH 10762]
          Length = 164

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 82/133 (61%), Gaps = 1/133 (0%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDT 125
           P K+ ++  LP+ +   +++V  V +PA +G+MG+L  HVP+I +LKPG++ V  +   +
Sbjct: 31  PDKIKLSLALPHQAIYRSQDVVQVNIPAESGEMGILAQHVPSIEQLKPGLVEVIEEAGGS 90

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           K++F+S GFA +  NSV  I AVE  P+D      V+  ++E  +    + ++ + AEA+
Sbjct: 91  KQFFLSGGFATVQPNSVLSINAVEGYPLDDFSADAVRNQISEAQKIAGGSGSEQDIAEAR 150

Query: 186 IGVDVHSALNSAL 198
           I ++V  +L +A+
Sbjct: 151 IELEVLESLQAAM 163


>gi|307203989|gb|EFN82893.1| ATP synthase subunit delta, mitochondrial [Harpegnathos saltator]
          Length = 162

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 75/109 (68%), Gaps = 1/109 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADI 145
           +  V VP+ +G  G+LP HVPT+A LKPGV++V++ + T KK FVSSG   I+ ++   I
Sbjct: 49  IRQVDVPSFSGSFGILPKHVPTLAVLKPGVVTVYEESGTAKKIFVSSGSVTINEDNSVQI 108

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           +A EA P++ +D +  +  L++  Q+LSSA++D +KAEA I ++V  AL
Sbjct: 109 LAEEAHPVEDLDNAAAKDILSKAQQQLSSASSDKDKAEATIAIEVAEAL 157


>gi|221121800|ref|XP_002165349.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Hydra
           magnipapillata]
          Length = 168

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 74/131 (56%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L++ F  P  +  +   V  V VP+ +G   +L  HVP IA L+PG+L+V      +KYF
Sbjct: 37  LSLTFGTPRETFFNNAVVTQVDVPSGSGNFCILAQHVPIIAVLRPGLLTVTKDGSVEKYF 96

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VSSG   ++ +S A I+A EA P+D+ D +  +K   +    LS A T+  KAEAQI VD
Sbjct: 97  VSSGTITVNKDSTAQILAEEASPLDRFDLNSARKAAEDARSALSVANTEALKAEAQIQVD 156

Query: 190 VHSALNSALTG 200
              AL  AL G
Sbjct: 157 TCDALLFALDG 167


>gi|315044183|ref|XP_003171467.1| ATP synthase F1 [Arthroderma gypseum CBS 118893]
 gi|311343810|gb|EFR03013.1| ATP synthase F1 [Arthroderma gypseum CBS 118893]
          Length = 165

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 86/137 (62%), Gaps = 3/137 (2%)

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDG 122
           T++  KL ++ VLP  +   + +V  V + A +G MG+L  HVP+I +L+PG++ +  +G
Sbjct: 29  TAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLRPGLIEIIEEG 88

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT-TDLEK 181
             TKK+F++ GFA +  +S  +I AVE  P++      V+  LAE  Q+L++ T ++ E 
Sbjct: 89  GQTKKFFLAGGFAVMQPDSNLNINAVEGFPLEDFSADAVKSQLAE-AQRLATGTGSEKEI 147

Query: 182 AEAQIGVDVHSALNSAL 198
           AEA++ V+V  +L ++L
Sbjct: 148 AEAKVQVEVLESLQASL 164


>gi|452987945|gb|EME87700.1| hypothetical protein MYCFIDRAFT_54841 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 166

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 1/133 (0%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDT 125
           P K+ +   LP+ +   +++V  V +PA +G+MGVL  HVP+I +LKPG++ V  +   +
Sbjct: 33  PDKIQLTLALPHQAIYKSQDVVQVNIPAESGEMGVLASHVPSIEQLKPGLVEVIEEQGGS 92

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           K++F+S GFA +  NSV  I AVE  P++      V+  +AE  +  S   ++ + AEA+
Sbjct: 93  KQFFLSGGFATVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGGGSEQDVAEAK 152

Query: 186 IGVDVHSALNSAL 198
           I ++V  +L + L
Sbjct: 153 IELEVLESLQANL 165


>gi|47208131|emb|CAF92415.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 160

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 9/161 (5%)

Query: 39  WKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQ 98
            ++  P +   ++ +   T  PQ   +  S   V F      E S K+VD   VP  TG 
Sbjct: 7   LRRAFPILRQTRSYAEAATGAPQMSFTFASPTQVFF-----KEASVKQVD---VPTLTGA 58

Query: 99  MGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
            G+LP HVPT+  L+PGV++V  D   + KYFVSSG   ++A+S   ++A EAVP+DQ+D
Sbjct: 59  FGILPAHVPTLQVLRPGVVTVFSDDGSSVKYFVSSGSVTVNADSSVQLLAEEAVPLDQLD 118

Query: 158 PSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  +  L +    L+  + +  +AE QI ++ + A+  AL
Sbjct: 119 IAAAKANLEKAQSALAGTSDEAARAEVQISIEANEAIIKAL 159


>gi|402079057|gb|EJT74322.1| ATP synthase subunit delta [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 165

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS    P  R     ++  K+ ++  LP+ S   +++V  V +PA +G+MGVL  HVP++
Sbjct: 15  PSAVRVPLQRRGYAEAVSDKIKLSLSLPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSM 74

Query: 110 AELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++ V  +   +K++F+S GFA +  NS   I AVE  P++      V+  +AE 
Sbjct: 75  EQLKPGLVEVIEESGGSKQFFLSGGFAIVQPNSHMSINAVEGFPLEDFSADAVKAQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  S + ++L+ AEA+I ++V  +L + L
Sbjct: 135 QKVASGSGSELDIAEAKIELEVLESLQAVL 164


>gi|340959402|gb|EGS20583.1| ATP synthase-like protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 165

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+ +  ++++V  V +PA +G+MGVL  HVP+I +LKPGV+ 
Sbjct: 24  RRGYAEAVSDKIKLSLSLPHQAIYTSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGVVE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +   TKK+F+S GFA +   S   I AVE  P++      V+  +AE  +  S   T
Sbjct: 84  VIEESGTTKKFFLSGGFAIVQPKSRLSINAVEGYPLEDFSAEAVRAQIAEAQKVASGNGT 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + E AEA+I ++V  +L + L
Sbjct: 144 EQEIAEAKIELEVLESLQAHL 164


>gi|296412659|ref|XP_002836040.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629840|emb|CAZ80197.1| unnamed protein product [Tuber melanosporum]
          Length = 167

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 80/131 (61%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKK 127
           K+ ++  LP+ +   A +V  V +PA +G MG+L  HVP+I +L+PGV+  + +G  +K+
Sbjct: 36  KIRLSLALPHQTIYKASDVIQVNIPAESGDMGILANHVPSIEQLRPGVIDIIEEGAGSKQ 95

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  +S   I AVEA P++   P  V+  +AE  +  + + T+ +  EA++ 
Sbjct: 96  FFLSGGFAVVQPDSQLSINAVEAFPLEDFSPEAVRAQIAEAQRIANGSGTEQDIVEAKVE 155

Query: 188 VDVHSALNSAL 198
           ++V   L +AL
Sbjct: 156 LEVLETLQAAL 166


>gi|24059904|dbj|BAC21368.1| unknown protein [Oryza sativa Japonica Group]
 gi|50509199|dbj|BAD30403.1| unknown protein [Oryza sativa Japonica Group]
          Length = 108

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 55/79 (69%), Gaps = 1/79 (1%)

Query: 18  SRAFSS-QVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVL 76
           SR  S+ +VPA  A DS F E+WKKV PN+E P TP   M PRP TP +IPSKLTVNFVL
Sbjct: 24  SRVLSTAEVPAEAATDSAFAEAWKKVAPNIEAPATPMSLMQPRPPTPAAIPSKLTVNFVL 83

Query: 77  PYASELSAKEVDMVIVPAS 95
           PY SE++ KEV    VP S
Sbjct: 84  PYKSEIANKEVCADRVPPS 102


>gi|296811488|ref|XP_002846082.1| ATP synthase delta chain [Arthroderma otae CBS 113480]
 gi|238843470|gb|EEQ33132.1| ATP synthase delta chain [Arthroderma otae CBS 113480]
          Length = 165

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 88/146 (60%), Gaps = 5/146 (3%)

Query: 57  TPRPQT--PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKP 114
           TP  Q    T++  KL ++ VLP  +   + +V  V + A +G MG+L  HVP+I +L+P
Sbjct: 20  TPLSQRTYATAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLRP 79

Query: 115 GVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
           G++ +  +G  TKK+F++ GFA +  +S  +I AVE   ++      V+  LAE  Q+L+
Sbjct: 80  GLIEIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFALEDFSADAVKSQLAE-AQRLA 138

Query: 174 SAT-TDLEKAEAQIGVDVHSALNSAL 198
           S T ++ E AEA+I V+V  +L ++L
Sbjct: 139 SGTGSEKEVAEAKIQVEVLESLQASL 164


>gi|119497145|ref|XP_001265337.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Neosartorya fischeri NRRL 181]
 gi|119413499|gb|EAW23440.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Neosartorya fischeri NRRL 181]
          Length = 165

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS    P  R     ++  K+ ++  LP+ +   +  V  V +PA +G+MGVL  HVP+I
Sbjct: 15  PSALRVPLQRRGYAEAVSDKIKLSLALPHQTIFKSAGVVQVNIPAESGEMGVLANHVPSI 74

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++  V +G   KK+F+S GFA +  +S   I AVEA P++      V+  +AE 
Sbjct: 75  EQLKPGLVEIVEEGGANKKFFLSGGFAVVQPDSALSINAVEAYPLEDFSADAVKSQIAEV 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  + + ++ + AEA+I ++V   L + L
Sbjct: 135 QKIANGSGSEQDIAEAKIELEVLETLQAVL 164


>gi|340518487|gb|EGR48728.1| ATP synthase delta chain [Trichoderma reesei QM6a]
          Length = 156

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 80/127 (62%), Gaps = 1/127 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND 124
           ++P K+ ++  LP+ S   +++V  V +PA +G+MGVL  HVP+I +LKPG++ V + N 
Sbjct: 30  AVPDKIKLSLALPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVVEENG 89

Query: 125 -TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             K++F+S GFA +  NSV  I + EA P++      ++ G+AE  +  +   ++ + AE
Sbjct: 90  PAKQFFLSGGFATVQPNSVLSINSPEAYPLEDFSADAIRAGIAEAQKVANGNGSEQDIAE 149

Query: 184 AQIGVDV 190
           A+I ++V
Sbjct: 150 AKIELEV 156


>gi|222637077|gb|EEE67209.1| hypothetical protein OsJ_24326 [Oryza sativa Japonica Group]
          Length = 97

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 18 SRAFSS-QVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVL 76
          SR  S+ +VPA  A DS F E+WKKV PN+E P TP   M PRP TP +IPSKLTVNFVL
Sbjct: 24 SRVLSTAEVPAEAATDSAFAEAWKKVAPNIEAPATPMSLMQPRPPTPAAIPSKLTVNFVL 83

Query: 77 PYASELSAKEVDM 89
          PY SE++ KE   
Sbjct: 84 PYKSEIANKECQC 96


>gi|453089229|gb|EMF17269.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Mycosphaerella populorum SO2202]
          Length = 166

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           K+ +   LP+ +   +K+V  V +PA +G+MGVL  HVP+I +LKPG++ V  +   +K+
Sbjct: 35  KIQLTLALPHQAIYKSKDVVQVNIPAESGEMGVLASHVPSIEQLKPGLVEVIEEQGGSKQ 94

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  NSV  I AVE  P++      V+  +AE  +  S + ++ + AEA+I 
Sbjct: 95  FFLSGGFATVQPNSVLSINAVEGYPLEAFSAEAVRNQIAEAQKIASGSGSEQDIAEAKIE 154

Query: 188 VDVHSALNSAL 198
           ++V   L + L
Sbjct: 155 LEVLETLQAQL 165


>gi|442751325|gb|JAA67822.1| Putative atp synthase h+ transporting mitochondrial f1 complex
           delta subunit precursor [Ixodes ricinus]
          Length = 166

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
           Q  T     + + F  P  +     +V  V VP+ +G  G+LP HVP +A +KPGV++V 
Sbjct: 27  QARTYADGGMPLTFASPAETFFDKVDVKQVDVPSYSGNFGILPNHVPALAVIKPGVVTVF 86

Query: 121 -DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
            +  D +++FVSSG   I+ +S   ++A  AVP+D++D    ++GLA+  Q +++A TD 
Sbjct: 87  TNEGDAQRFFVSSGTITINEDSSVQVLAEAAVPVDRLDAQACREGLAKAQQAVTAAATDE 146

Query: 180 EKAEAQIGVDVHSALNSAL 198
            +AEAQI V+VH AL  A+
Sbjct: 147 ARAEAQIQVEVHEALVKAV 165


>gi|406867844|gb|EKD20882.1| hypothetical protein MBM_01564 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 165

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 83/141 (58%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++ VLP+ S   ++ V  V +PA TG+MG+L  HVP+I +LKPG++ 
Sbjct: 24  RRGYAEAVSDKIKLSLVLPHQSIYRSQGVVQVNIPAETGEMGILANHVPSIEQLKPGLVE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +   +K++F+S GFA +  NS   I AVE  P++      V+  +AE  +    + +
Sbjct: 84  VIEESGGSKQFFLSGGFATVQPNSELSINAVEGFPLEDFSIENVRSQIAEAQKIAGGSGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + + AEA+I ++V  +L +AL
Sbjct: 144 EQDIAEAKIEIEVLESLQAAL 164


>gi|367027342|ref|XP_003662955.1| hypothetical protein MYCTH_2079768 [Myceliophthora thermophila ATCC
           42464]
 gi|347010224|gb|AEO57710.1| hypothetical protein MYCTH_2079768 [Myceliophthora thermophila ATCC
           42464]
          Length = 164

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 81/140 (57%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+ S   +++   V +PA +G MGVL  HVP+I +LKPG++ 
Sbjct: 24  RRGYAEAVSDKIKLSLSLPHQSIYKSQDAVQVNIPAVSGDMGVLAHHVPSIEQLKPGIVE 83

Query: 119 VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V + + TK++F+S GFA +  NS   I AVE  P++   P  V+  +AE  +  +   ++
Sbjct: 84  VIEESGTKRFFLSGGFAVVQPNSALSINAVEGYPLEDFSPEAVRAQIAEAQKVANGNGSE 143

Query: 179 LEKAEAQIGVDVHSALNSAL 198
            + AEA+I ++V   L + L
Sbjct: 144 QDIAEAKIELEVLETLQAHL 163


>gi|311248247|ref|XP_003123039.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Sus scrofa]
          Length = 168

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGND 124
           P +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  
Sbjct: 35  PGQMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGT- 93

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           T KYFVSSG   ++A+S   ++A EAV +D +DP + +  L +   +L  A  +  +AE 
Sbjct: 94  TSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQSELLGAADEASRAEI 153

Query: 185 QIGVDVHSALNSAL 198
           QI ++ + AL  AL
Sbjct: 154 QIRIEANEALVKAL 167


>gi|410921176|ref|XP_003974059.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Takifugu rubripes]
 gi|410921178|ref|XP_003974060.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Takifugu rubripes]
          Length = 160

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 9/161 (5%)

Query: 39  WKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQ 98
            ++  P +   ++ +   T  PQ   +  S   V F      E S K+VD   VP  TG 
Sbjct: 7   LRRALPVLRQTRSYAEAATGAPQMSFTFASPTQVFF-----QEASVKQVD---VPTLTGT 58

Query: 99  MGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
            G+LP HVPT+  L+PGV++V  D     KYFVSSG   ++A+S   ++A EAV +DQ+D
Sbjct: 59  FGILPAHVPTLQVLRPGVVTVFSDDGSAVKYFVSSGSVTVNADSSVQLLAEEAVSLDQLD 118

Query: 158 PSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  +  L +    L+ A+ +  +AE QI ++ + A+  AL
Sbjct: 119 VAAAKANLEKAQSALAGASDEAARAEVQISIEANEAIIKAL 159


>gi|83944755|ref|ZP_00957121.1| ATP synthase F1, epsilon subunit [Oceanicaulis sp. HTCC2633]
 gi|83851537|gb|EAP89392.1| ATP synthase F1, epsilon subunit [Oceanicaulis sp. HTCC2633]
          Length = 133

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL  + V P    + A EVDMV+VP S G  GVL  H P ++ ++ G +SVH GND 
Sbjct: 1   MADKLHFDLVSP-ERRVFAGEVDMVVVPGSEGDFGVLANHAPFMSTIRTGAISVHSGNDV 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            + F+  GFA + A  +  I+A EA+ +  ++   V K LAE  + L  A  D E+ EA+
Sbjct: 60  SRTFIRGGFAEVTAAGLT-ILAEEAIDLADVNAEDVSKSLAEAREDLGQARDDEERHEAE 118

Query: 186 IGVDVHSALNSALT 199
             ++   AL S L+
Sbjct: 119 ARIEKFQALLSELS 132


>gi|145229221|ref|XP_001388919.1| ATP synthase subunit delta [Aspergillus niger CBS 513.88]
 gi|134055020|emb|CAK37027.1| unnamed protein product [Aspergillus niger]
 gi|350638073|gb|EHA26429.1| hypothetical protein ASPNIDRAFT_206061 [Aspergillus niger ATCC
           1015]
          Length = 165

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS    P  R     ++  K+ ++  LP+ S   +  V  V +PA +G+MGVL  HVP+I
Sbjct: 15  PSALRVPLQRRGYAEAVSDKIKLSLTLPHQSIFKSTGVVQVNIPAESGEMGVLANHVPSI 74

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++  V +G  +KK+F+S GFA +  +S   I AVE  P+++     V+  +AE 
Sbjct: 75  EQLKPGLVEIVEEGGASKKFFLSGGFAVVQPDSQLSINAVEGFPLEEFSIDNVRSQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  + + ++ + AEA+I ++V  +L + L
Sbjct: 135 QKIANGSGSEQDIAEAKIELEVLESLQAVL 164


>gi|302917107|ref|XP_003052364.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733303|gb|EEU46651.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 165

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 1/137 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++P K+ ++  LP+ +   +++V  V +PA +G+MGVL  HVP+I +LKPG++ 
Sbjct: 24  RRTYAEAVPDKIKLSLALPHQAIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +    K++F+S GFA +  NS+  I AVE  P++      V+  +AE  +  S + +
Sbjct: 84  VIEESGGAKQFFLSGGFATVQPNSILSINAVEGFPLEDFSADAVRAQIAEAQKVASGSGS 143

Query: 178 DLEKAEAQIGVDVHSAL 194
           + + AEA+I ++V   L
Sbjct: 144 EQDIAEAKIELEVLETL 160


>gi|330924462|ref|XP_003300649.1| hypothetical protein PTT_11953 [Pyrenophora teres f. teres 0-1]
 gi|311325113|gb|EFQ91256.1| hypothetical protein PTT_11953 [Pyrenophora teres f. teres 0-1]
          Length = 992

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 79/132 (59%), Gaps = 1/132 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKK 127
           K+ ++  LP+ S   +++V  V +PA TG MGVL  HV +I +LKPG++  + +   +K+
Sbjct: 34  KIKLSLALPHQSIYKSQDVVQVNLPAETGDMGVLANHVASIEQLKPGLVEIIEESGGSKQ 93

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  NSV  I AVE  P++      V+  + E  +  S + ++ + AEA+I 
Sbjct: 94  FFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIGEAQKIASGSGSEADIAEAKIE 153

Query: 188 VDVHSALNSALT 199
           ++V  +L +AL 
Sbjct: 154 LEVLESLQAALN 165


>gi|367013408|ref|XP_003681204.1| hypothetical protein TDEL_0D04090 [Torulaspora delbrueckii]
 gi|359748864|emb|CCE91993.1| hypothetical protein TDEL_0D04090 [Torulaspora delbrueckii]
          Length = 159

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  +  +V  V +PA +G++G+L  HVPT+ +L PGV+ V +G  +KK+F
Sbjct: 31  LQLQFALPHETVFAGSKVTQVNLPAQSGRIGILANHVPTVEQLTPGVIEVFEGTQSKKFF 90

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GFA +  +S   I +VEA P+D      V + L    +  +S++ +   AEA I ++
Sbjct: 91  VSGGFAAMQPDSTLCITSVEAFPLDSFSQENV-RSLLSDAKSKASSSDERVAAEAAIQIE 149

Query: 190 VHSALNSAL 198
           V  +L SAL
Sbjct: 150 VLESLQSAL 158


>gi|67083949|gb|AAY66909.1| ATP synthase H+ transporting, mitochondrial F1 complex, delta
           subunit precursor [Ixodes scapularis]
          Length = 166

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 1/139 (0%)

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
           Q  T     + + F  P  +     +V  V VP+ +G  G+LP HVP +A +KPGV++V 
Sbjct: 27  QARTYADGGMPLTFASPAETFFDKVDVKQVDVPSYSGNFGILPHHVPALAVIKPGVVTVF 86

Query: 121 -DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
            +  D +++FVSSG   I+ +S   ++A  AVP+D++D    ++GLA+  Q +++A TD 
Sbjct: 87  TNEGDAQRFFVSSGTITINEDSSVQVLAEAAVPVDRLDAQACREGLAKAQQAVTAAATDE 146

Query: 180 EKAEAQIGVDVHSALNSAL 198
            +AEAQI V+VH AL  A+
Sbjct: 147 ARAEAQIEVEVHEALVKAI 165


>gi|328769089|gb|EGF79134.1| hypothetical protein BATDEDRAFT_90133 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 163

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 3/147 (2%)

Query: 53  SVYMTPRPQTPTSIPS--KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIA 110
           S+ +  R     ++ S  KL VN   P+ + LS  E   V + +S G MG+L  HVPTIA
Sbjct: 14  SLALARRTYATEAVSSSGKLMVNLTAPHQAILSKFEARQVNLSSSDGDMGILANHVPTIA 73

Query: 111 ELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQ 170
           +LKPG++ V     + K+FVS GFA I+ +S  +I AVEA  + ++D    ++ + +  +
Sbjct: 74  QLKPGIIEVIGAEKSSKFFVSGGFAVINPDSSLNINAVEAFSVAELDIDAAKRAVEDATK 133

Query: 171 KLSSATTDLEKAEAQIGVDVHSALNSA 197
           ++SS + + +K  A+I ++V  A+ +A
Sbjct: 134 RMSSGSEE-DKVLAKIELEVFEAVVAA 159


>gi|347836498|emb|CCD51070.1| similar to mitochondrial ATP synthase delta chain [Botryotinia
           fuckeliana]
          Length = 165

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           P+   TP  R     ++  K+ ++  LP+ S   +++V  V +PA +G+MG+L  HVP+I
Sbjct: 15  PTALKTPVLRRGYAEAVAEKIKLSLALPHQSVYRSQDVVQVNIPAESGEMGILANHVPSI 74

Query: 110 AELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++ V  +   +K++F+S GFA +  NS   I AVE  P++      V+  +AE 
Sbjct: 75  EQLKPGLVEVIEESGGSKQFFLSGGFAVVQPNSSLSINAVEGFPLEDFSADAVRSQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +    + ++ + AEA+I ++V   L + L
Sbjct: 135 QKIAGGSGSEQDIAEAKIELEVLETLQAHL 164


>gi|297607254|ref|NP_001059696.2| Os07g0495400 [Oryza sativa Japonica Group]
 gi|255677783|dbj|BAF21610.2| Os07g0495400 [Oryza sativa Japonica Group]
          Length = 96

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 51/70 (72%), Gaps = 1/70 (1%)

Query: 18 SRAFSS-QVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVL 76
          SR  S+ +VPA  A DS F E+WKKV PN+E P TP   M PRP TP +IPSKLTVNFVL
Sbjct: 24 SRVLSTAEVPAEAATDSAFAEAWKKVAPNIEAPATPMSLMQPRPPTPAAIPSKLTVNFVL 83

Query: 77 PYASELSAKE 86
          PY SE++ KE
Sbjct: 84 PYKSEIANKE 93


>gi|452846818|gb|EME48750.1| hypothetical protein DOTSEDRAFT_67702 [Dothistroma septosporum
           NZE10]
          Length = 167

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 86/152 (56%), Gaps = 5/152 (3%)

Query: 52  PSVYMTPRPQTPTSI----PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVP 107
           PS + T +P    +     P K+ +   LP+ +   +++V  V +PA +G+MGVL  HVP
Sbjct: 15  PSTFRTVQPLLKRTYADVAPDKIQLTLALPHQAIYKSQDVVQVNIPAESGEMGVLASHVP 74

Query: 108 TIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLA 166
           +I +LKPG++ V  +   +K++F+S GFA +   S+  I AVE  P++      V+  ++
Sbjct: 75  SIEQLKPGLVEVIEESGGSKQFFLSGGFATVQPGSILSINAVEGYPLEDFSADAVRNQIS 134

Query: 167 EFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           E  +  S   ++ + AEA+I ++V  +L + L
Sbjct: 135 EAQKIASGGGSEQDVAEAKIELEVLESLQANL 166


>gi|443919042|gb|ELU39337.1| ATP synthase, delta/Epsilon chain, beta-sandwich domain-containing
           protein [Rhizoctonia solani AG-1 IA]
          Length = 175

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 5/135 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
           L ++ VLP+ S  ++  V  V + A +G MG+L  HVPT+  L+PGV+ V   G+ +KK+
Sbjct: 40  LKLSLVLPHQSIFTSANVVQVNIAAESGDMGILANHVPTVEPLRPGVVEVIETGSGSKKW 99

Query: 129 FVS----SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           F      +    +H N+   I A+EA P++ I    V+  LAE  + L  + +D EKAEA
Sbjct: 100 FGELLNITAPESLHPNNTLTINAIEAAPLEDISAEAVRANLAEAQRVLGGSASDKEKAEA 159

Query: 185 QIGVDVHSALNSALT 199
           +I  DV+ A+  AL+
Sbjct: 160 RIEADVYEAIQQALS 174


>gi|67515991|ref|XP_657881.1| hypothetical protein AN0277.2 [Aspergillus nidulans FGSC A4]
 gi|40746994|gb|EAA66150.1| hypothetical protein AN0277.2 [Aspergillus nidulans FGSC A4]
          Length = 660

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGN 123
           ++  K+ ++ VLP+ +   + +V  V +PA +G+MGVL  HVP+I +LKPG++  V +G 
Sbjct: 31  AVNDKIKLSLVLPHQTIFRSTDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEIVEEGG 90

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            +KK+F+S GFA +  +S   I AVE  P++      V+  LAE  +  S   ++ + AE
Sbjct: 91  ASKKFFLSGGFAVVQPDSQLSINAVEGFPLEDFSAENVRAQLAEAQKIASGNGSEQDIAE 150

Query: 184 AQIGVD 189
           A+I ++
Sbjct: 151 AKIEIE 156


>gi|70990422|ref|XP_750060.1| ATP synthase delta chain, mitochondrial precursor [Aspergillus
           fumigatus Af293]
 gi|66847692|gb|EAL88022.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus fumigatus Af293]
 gi|159130541|gb|EDP55654.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Aspergillus fumigatus A1163]
          Length = 165

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 3/150 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS    P  R     ++  K+ ++  LP+ +   + +V  V +PA +G+MGVL  HVP+I
Sbjct: 15  PSALRVPLQRRGYAEAVSDKIKLSLALPHQTIFKSADVVQVNIPAESGEMGVLANHVPSI 74

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++  V +    KK+F+S GFA +  +S   I AVEA P++      V+  +AE 
Sbjct: 75  EQLKPGLVEIVEESGANKKFFLSGGFAVVQPDSALSINAVEAYPLEDFSADAVKSQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  + + ++ + AEA+I ++V   L + L
Sbjct: 135 QKIANGSGSEQDIAEAKIELEVLETLQAVL 164


>gi|1843635|gb|AAC15908.1| ATP synthase F1 deta subunit [Kluyveromyces lactis]
          Length = 158

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S   V  V +PA +GQ+G+L  HVPT+ +L PGV+ V +G+ +KK+F
Sbjct: 31  LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGS-SKKFF 89

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GFA +  +S   I +VEA P++   P  V+  LAE  + +SSA      AEA I ++
Sbjct: 90  VSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSADEV-AAAEAAIQLE 148

Query: 190 VHSALNSAL 198
           V  AL +AL
Sbjct: 149 VLEALQAAL 157


>gi|451997594|gb|EMD90059.1| hypothetical protein COCHEDRAFT_1225615 [Cochliobolus
           heterostrophus C5]
          Length = 165

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKK 127
           K+ ++  LP+ S   +++V  V +PA TG+MGVL  HV +I +LKPG++  + +    K+
Sbjct: 34  KIKLSLALPHQSIYKSQDVVQVNLPAETGEMGVLANHVASIEQLKPGLVEIIEEQGGNKQ 93

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  NSV  I AVE  P++      V+  +AE  +  S   ++ + AEA+I 
Sbjct: 94  FFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGNGSETDIAEAKIE 153

Query: 188 VDVHSALNSAL 198
           ++V  +L +AL
Sbjct: 154 LEVLESLQAAL 164


>gi|451852084|gb|EMD65379.1| hypothetical protein COCSADRAFT_35437 [Cochliobolus sativus ND90Pr]
          Length = 165

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKK 127
           K+ ++  LP+ S   +++V  V +PA TG+MGVL  HV +I +LKPG++  + +    K+
Sbjct: 34  KIKLSLALPHQSIYKSQDVVQVNLPAETGEMGVLANHVASIEQLKPGLVEIIEEQGGNKQ 93

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  NSV  I AVE  P++      V+  +AE  +  S   ++ + AEA+I 
Sbjct: 94  FFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIAEAQKIASGNGSEADIAEAKIE 153

Query: 188 VDVHSALNSAL 198
           ++V  +L +AL
Sbjct: 154 LEVLESLQAAL 164


>gi|407925254|gb|EKG18269.1| ATPase F1 complex delta/epsilon subunit [Macrophomina phaseolina
           MS6]
          Length = 167

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           K+ ++  LP+ +   + EV  V +PA TG MGVL  HVP+I +LKPG++ V  +   +K+
Sbjct: 36  KIKLSLALPHQTIFKSSEVVQVNLPADTGDMGVLANHVPSIEQLKPGLIEVIEEQGGSKQ 95

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +   S   + AVEA P++      V+  +AE  +  S   ++++ AEA+I 
Sbjct: 96  WFVSGGFAVVQPGSELSVNAVEAYPLEDFSAENVRNQIAEAQKVASGGGSEVDVAEAKIE 155

Query: 188 VDVHSALNSAL 198
           ++V  +L + L
Sbjct: 156 LEVLESLQAVL 166


>gi|410077255|ref|XP_003956209.1| hypothetical protein KAFR_0C00790 [Kazachstania africana CBS 2517]
 gi|372462793|emb|CCF57074.1| hypothetical protein KAFR_0C00790 [Kazachstania africana CBS 2517]
          Length = 158

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           L ++F LP+ +      V  V VP  +G+ GVL  HVPTI +L PG++  + + + +KKY
Sbjct: 30  LKLHFALPHETLYYGSNVTQVNVPGKSGKFGVLANHVPTIEQLSPGIVEIIEESSKSKKY 89

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           ++S GFA +  +S+  + AVEA P++Q  P  V+  L+E   K++S+   +  AE +I V
Sbjct: 90  YISGGFASVQPDSLLCVTAVEAFPLEQFSPDKVKTLLSEARNKVTSSDGKV-AAENKIKV 148

Query: 189 DVHSALNSAL 198
            +   L S L
Sbjct: 149 SILEELESLL 158


>gi|412990861|emb|CCO18233.1| predicted protein [Bathycoccus prasinos]
          Length = 84

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 55/73 (75%)

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           K+YFVSSGFAF HA+S  DI+AVEAVP++ +D ++V+K L+E   K  +A  D EKA  Q
Sbjct: 7   KQYFVSSGFAFAHADSSVDILAVEAVPVEHLDETVVRKMLSEHTAKFQAAKDDYEKATHQ 66

Query: 186 IGVDVHSALNSAL 198
           IG+DV +A+ SA+
Sbjct: 67  IGIDVSTAMVSAI 79


>gi|156051296|ref|XP_001591609.1| ATP synthase delta chain, mitochondrial precursor [Sclerotinia
           sclerotiorum 1980]
 gi|154704833|gb|EDO04572.1| ATP synthase delta chain, mitochondrial precursor [Sclerotinia
           sclerotiorum 1980 UF-70]
          Length = 165

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 82/141 (58%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+ S   +++V  V +PA +G+MG+L  HVP+I +LKPG++ 
Sbjct: 24  RRGYAEAVADKIKLSLALPHQSVYRSQDVVQVNIPAESGEMGILANHVPSIEQLKPGLVE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +   +K++F+S GFA +  NS   I AVE  P++      V+  +AE  + +  + +
Sbjct: 84  VIEESGGSKQFFLSGGFAVVQPNSSLSINAVEGFPLEDFSVEAVRSQIAEAQKIVGGSGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + + AEA+I ++V   L + L
Sbjct: 144 EQDIAEAKIELEVLETLQAHL 164


>gi|41152365|ref|NP_956262.1| ATP synthase subunit delta, mitochondrial [Danio rerio]
 gi|37589805|gb|AAH59627.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Danio rerio]
 gi|40675642|gb|AAH65042.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Danio rerio]
          Length = 159

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 7/135 (5%)

Query: 68  SKLTVNFVLP---YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           ++++  F  P   +  E S K++D   VP  TG  G+LP HVPT+  L+PGV++V +D  
Sbjct: 27  AQMSFTFASPTEVFFKEASVKQID---VPTLTGAFGILPAHVPTLQVLRPGVVTVFNDDG 83

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            +KKYFVSSG   ++A+S   ++A EA P++ +D +  +  L +   +L SA+ +  +AE
Sbjct: 84  SSKKYFVSSGSVTVNADSSVQLLAEEAFPLESLDVAAAKANLEKAQSELVSASDEATRAE 143

Query: 184 AQIGVDVHSALNSAL 198
             I ++ + A+  AL
Sbjct: 144 VLISIEANEAIVKAL 158


>gi|396469634|ref|XP_003838453.1| hypothetical protein LEMA_P113890.1 [Leptosphaeria maculans JN3]
 gi|312215021|emb|CBX94974.1| hypothetical protein LEMA_P113890.1 [Leptosphaeria maculans JN3]
          Length = 169

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 1/122 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           K+ +   LP+ S   +++V  V +PA TG MGVL  HVP+I +LKPG++ V  +   +K+
Sbjct: 34  KIKLTLALPHQSIYKSQDVVQVNLPAETGDMGVLASHVPSIEQLKPGLVEVIEEQGGSKQ 93

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  NSV  I AVE  PI+      V+  +AE  +  S + ++ + AEA+I 
Sbjct: 94  FFLSGGFAVVQPNSVLSINAVEGYPIEDFSAEAVKNQMAEAQKIASGSGSEADIAEAKIE 153

Query: 188 VD 189
           ++
Sbjct: 154 LE 155


>gi|189202306|ref|XP_001937489.1| ATP synthase delta chain, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187984588|gb|EDU50076.1| ATP synthase delta chain, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 165

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKK 127
           K+ ++  LP+ S   +++V  V +PA TG MGVL  HV +I +LKPG++  + +   +K+
Sbjct: 34  KIKLSLALPHQSIYKSQDVVQVNLPAETGDMGVLANHVASIEQLKPGLVEIIEESGGSKQ 93

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +  NSV  I AVE  P++      V+  + E  +  S + ++ + AEA+I 
Sbjct: 94  FFLSGGFAVVQPNSVLSINAVEGYPLEDFSAEAVRNQIGEAQKIASGSGSEADIAEAKIE 153

Query: 188 VDVHSALNSAL 198
           ++V  +L +AL
Sbjct: 154 LEVLESLQAAL 164


>gi|302417332|ref|XP_003006497.1| ATP synthase delta chain [Verticillium albo-atrum VaMs.102]
 gi|261354099|gb|EEY16527.1| ATP synthase delta chain [Verticillium albo-atrum VaMs.102]
          Length = 165

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 81/135 (60%), Gaps = 1/135 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           ++P K+ ++  LP+     +++V  V +PA +G+MGVL  HVP I +LKPG++ V  +  
Sbjct: 30  AVPDKIKLSLSLPHQPIYKSQDVVQVNIPAESGEMGVLANHVPCIEQLKPGLIEVIEESG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            +K++F+S GFA +   S+  I AVE  P++      V+  +AE  +  S + ++ + AE
Sbjct: 90  GSKQFFLSGGFATVQPGSLLSINAVEGYPLEDFSAEAVRTQIAEAQKVASGSGSEQDIAE 149

Query: 184 AQIGVDVHSALNSAL 198
           A+I ++V  +L + L
Sbjct: 150 AKIELEVLESLQANL 164


>gi|358391990|gb|EHK41394.1| F1F0 ATP synthase delta chain mitochondrial precursor [Trichoderma
           atroviride IMI 206040]
          Length = 165

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 79/137 (57%), Gaps = 1/137 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++P K+ ++  LP+ S   +++V  V +PA +G MGVL  HVP+I +LKPG++ 
Sbjct: 24  RRGYAEAVPDKIKLSLALPHQSIYKSQDVVQVNIPAESGDMGVLANHVPSIEQLKPGLVE 83

Query: 119 -VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
            V +    K++FVS GFA +  NS+  I + EA P++      ++  +AE  +  S   +
Sbjct: 84  VVEESGAAKQFFVSGGFASVQPNSILSINSPEAYPLEDFSADAIRAAIAEAQKVASGNGS 143

Query: 178 DLEKAEAQIGVDVHSAL 194
           + + AEA+I ++V   L
Sbjct: 144 EQDIAEAKIELEVLETL 160


>gi|365982767|ref|XP_003668217.1| hypothetical protein NDAI_0A08200 [Naumovozyma dairenensis CBS 421]
 gi|343766983|emb|CCD22974.1| hypothetical protein NDAI_0A08200 [Naumovozyma dairenensis CBS 421]
          Length = 170

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
           +T  S  + L + F LP+ +  S  EV  V +PA +GQ+G+L  H+PT+ +L  GV+ + 
Sbjct: 28  ETVNSTSNVLKLQFALPHETLYSNTEVKQVNLPAKSGQIGILANHIPTVEQLNSGVVEIF 87

Query: 121 D--GNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           +   N TKKYF+  GFA +  NS   I AVEA P+D    + V+  L E  + ++S
Sbjct: 88  ESTNNSTKKYFIPGGFATMQPNSTLCITAVEAFPLDSFSEANVKSLLQEAKKNINS 143


>gi|342889302|gb|EGU88457.1| hypothetical protein FOXB_01060 [Fusarium oxysporum Fo5176]
          Length = 897

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS- 118
           P+ P +    + ++  LP+ S   +++V  V +PA +G+MGVL  HVP+I +LKPG++  
Sbjct: 40  PRAPATTGFCIKLSLALPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEV 99

Query: 119 VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V +   +K++F+S GFA +  NSV  I AVE  P++      ++  +AE  +  + + ++
Sbjct: 100 VEESAGSKQFFLSGGFATVQPNSVLSINAVEGYPLEDFSAEAIRAQIAEAQKVANGSGSE 159

Query: 179 LEKAEAQIGVDVHSALNSALTG 200
            + AEA+I ++  +   SA+ G
Sbjct: 160 QDIAEAKIELEKDNPRFSAVRG 181


>gi|378733064|gb|EHY59523.1| ATP synthase subunit delta, mitochondrial [Exophiala dermatitidis
           NIH/UT8656]
          Length = 165

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 83/141 (58%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+ +   +++V  V VPA +G+MG+L  HVP+I +LKPG++ 
Sbjct: 24  RRGYAEAVSDKIKLSLALPHQAIYKSQDVVQVNVPAESGEMGILAQHVPSIEQLKPGLVE 83

Query: 119 VHDGN-DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           + + N   K++F+S GFA +  NS   I AVE  P++      V+  +AE  +  +   +
Sbjct: 84  IIEENGGNKQFFLSGGFAVVQPNSHLTINAVEGFPLEDFSEEAVRSQIAEAQKIANGNGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + + AEA+I ++V  +L +AL
Sbjct: 144 EQDIAEAKIELEVLESLQAAL 164


>gi|255722770|ref|XP_002546319.1| ATP synthase delta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240130836|gb|EER30398.1| ATP synthase delta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 161

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 40/195 (20%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFRQA R +A+ S+    R ++++  AAP+ D+                           
Sbjct: 1   MFRQAFRQVAKQSSSVVKRTYATE--AAPSSDA--------------------------- 31

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
                    L ++  LPY +  +  EV  V +P+  G +G+L  H+P + +L+PG+L + 
Sbjct: 32  ---------LKLSLALPYQTLYNESEVQQVNLPSVNGDLGILANHIPIVEQLRPGLLEII 82

Query: 121 DGN-DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
             N D+++YFVS GFA +   +   I A+EA   DQID S V+  +A+  QK + ++ + 
Sbjct: 83  SKNGDSEQYFVSGGFAMVQPGNKLTISAIEAFKPDQIDLSAVKNLIAD-AQKRAESSDEK 141

Query: 180 EKAEAQIGVDVHSAL 194
             AEA I ++V  AL
Sbjct: 142 VAAEATIELEVLDAL 156


>gi|62858087|ref|NP_001016516.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Xenopus (Silurana) tropicalis]
 gi|140833116|gb|AAI35475.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Xenopus (Silurana) tropicalis]
          Length = 162

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 6/123 (4%)

Query: 78  YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFA 135
           + S  S K+VD   VP  TG  G+LP HVPT+  L+PG+++V   DG  TK YFVSSG  
Sbjct: 43  FYSGASVKQVD---VPTLTGMFGILPAHVPTLQVLRPGIVTVFSDDGGATK-YFVSSGSV 98

Query: 136 FIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
            ++A+S   ++A EAV +D +D S  +  L +   +L SA  +  KAEA I V+   A+ 
Sbjct: 99  TVNADSSVQLLAEEAVTLDMLDLSTAKSNLEKAQAELQSAGDEAAKAEALINVEASEAIV 158

Query: 196 SAL 198
            AL
Sbjct: 159 KAL 161


>gi|398399178|ref|XP_003853046.1| hypothetical protein MYCGRDRAFT_104198 [Zymoseptoria tritici
           IPO323]
 gi|339472928|gb|EGP88022.1| hypothetical protein MYCGRDRAFT_104198 [Zymoseptoria tritici
           IPO323]
          Length = 169

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 79/131 (60%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKK 127
           K+ +   LP+ +   +++V  V +PA +G+MGVL  HVP+I +LKPG++ V + N  +K+
Sbjct: 38  KIQLTLALPHQAVYKSQDVVQVNIPAESGEMGVLASHVPSIEQLKPGLVEVIEENGGSKQ 97

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +F+S GFA +   SV  I AVE  P++      V+  +AE  +      ++ + AEA+I 
Sbjct: 98  FFLSGGFATVQPGSVLSINAVEGYPLEDFSADAVRNQIAEAQKIAQGGGSEQDVAEAKIE 157

Query: 188 VDVHSALNSAL 198
           ++V  +L ++L
Sbjct: 158 LEVLESLQASL 168


>gi|158297424|ref|XP_317657.4| AGAP007841-PA [Anopheles gambiae str. PEST]
 gi|157015188|gb|EAA12214.5| AGAP007841-PA [Anopheles gambiae str. PEST]
          Length = 169

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 73/110 (66%), Gaps = 3/110 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND--TKKYFVSSGFAFIHANSVAD 144
           +  V VP+ +G  G+LP HVPT+A LKPGV++V++ ND   KK FVSSG   ++ ++   
Sbjct: 56  IRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYE-NDGAVKKIFVSSGTVTVNEDASVQ 114

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           ++A EA P++ +D S  ++ L+    +LSSA+ D ++AEA I ++V  AL
Sbjct: 115 VLAEEAHPVEDLDSSACRELLSNAQTQLSSASGDKDRAEAAIAMEVAEAL 164


>gi|346978672|gb|EGY22124.1| ATP synthase delta chain [Verticillium dahliae VdLs.17]
          Length = 165

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 1/135 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           ++P K+ ++  LP+     +++V  V +PA +G+MGVL  HVP I +LKPG++ V  +  
Sbjct: 30  AVPDKIKLSLSLPHQPIYKSQDVVQVNIPAESGEMGVLANHVPCIEQLKPGLIEVIEESG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            +K++F+S GFA +   S+  I AVE  P++      V+  +AE  +  + + ++ + AE
Sbjct: 90  GSKQFFLSGGFATVQPGSLLSINAVEGYPLEDFSAEAVRTQIAEAQKVANGSGSEQDIAE 149

Query: 184 AQIGVDVHSALNSAL 198
           A+I ++V  +L + L
Sbjct: 150 AKIELEVLESLQANL 164


>gi|346324930|gb|EGX94527.1| ATP synthase delta chain, putative [Cordyceps militaris CM01]
          Length = 165

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 80/133 (60%), Gaps = 1/133 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN- 123
           +IP K+ ++  LP+ +   ++ V  V +PA +G MGVL  HVP+I +LKPG++ V + N 
Sbjct: 30  AIPDKIKLSLSLPHQTIFKSQNVVQVNIPAESGDMGVLANHVPSIEQLKPGIVEVVEENG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            TK +F+S GFA +  +S   I A EA P++      ++  +AE  +  S + ++ + AE
Sbjct: 90  STKSFFLSGGFATVQPDSSLSINAPEAYPLEDFSAEAIRNQIAEAQKIASGSGSEQDIAE 149

Query: 184 AQIGVDVHSALNS 196
           A+I ++V   L++
Sbjct: 150 AKIELEVLETLHA 162


>gi|255951366|ref|XP_002566450.1| Pc22g25650 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593467|emb|CAP99853.1| Pc22g25650 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 156

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 3/142 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS    P  R     ++  K+ ++  LP+ +   +  V  V +PA++G+MGVL  HVP+I
Sbjct: 15  PSFLGAPVQRRGYAEAVADKIKLSLTLPHQTIYRSTGVTQVNIPAASGEMGVLANHVPSI 74

Query: 110 AELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++ +  +   TK+YF+S GFA +  +S   I AVE  P+++     ++  +AE 
Sbjct: 75  EQLKPGLVEILEESGATKQYFLSGGFAVVQPDSQLSINAVEGFPLEEFSADSIRAQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDV 190
            +  S + ++ + AEA+I ++V
Sbjct: 135 QKIASGSGSEQDIAEAKIELEV 156


>gi|440636077|gb|ELR05996.1| ATP synthase subunit delta, mitochondrial [Geomyces destructans
           20631-21]
          Length = 165

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+    ++++V  V + A +G+MG+L  HVP+I +LKPG++ 
Sbjct: 24  RRGYAEAVSDKIKLSLNLPHQKVYTSQDVVQVNIAAESGEMGLLANHVPSIEQLKPGLIE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +   +K++F+S GFA ++ NSV  I AVE  P++      V+  L E  +  S   +
Sbjct: 84  VIEESAGSKQFFLSGGFAVMNPNSVLSINAVEGFPLEDFSIEAVRSQLTEAQKVASGNGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
             E AEA I ++V  +L +AL
Sbjct: 144 ATEIAEANIEIEVLESLQAAL 164


>gi|389626007|ref|XP_003710657.1| ATP synthase subunit delta [Magnaporthe oryzae 70-15]
 gi|351650186|gb|EHA58045.1| ATP synthase subunit delta [Magnaporthe oryzae 70-15]
 gi|440468762|gb|ELQ37904.1| ATP synthase delta chain [Magnaporthe oryzae Y34]
 gi|440478797|gb|ELQ59596.1| ATP synthase delta chain [Magnaporthe oryzae P131]
          Length = 164

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 81/134 (60%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND 124
           ++  K+ ++  LP+ S   +++V  V +PA +G+MGVL  HVP+I +LKPG++ V + + 
Sbjct: 30  AVADKIKLSLSLPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVVEESG 89

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +K++F++ GFA +  NS   I A E  P++      V+  ++E  +  +   ++ + AEA
Sbjct: 90  SKQFFLAGGFAVVQPNSSMSINATEGFPLEDFSAEAVKAQISEATKVANGNGSEQDIAEA 149

Query: 185 QIGVDVHSALNSAL 198
           +I ++V  +L + L
Sbjct: 150 KIELEVLESLQAVL 163


>gi|323334252|gb|EGA75634.1| Atp16p [Saccharomyces cerevisiae AWRI796]
          Length = 149

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK+F
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFF 91

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           +S GFA +  +S   + A+EA P++      ++K
Sbjct: 92  ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKK 125


>gi|149435351|ref|XP_001513376.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Ornithorhynchus anatinus]
 gi|345309933|ref|XP_003428901.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Ornithorhynchus anatinus]
          Length = 165

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 3/133 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
           ++++  F  P     ++  V  V VP  +G  G+L  HVPT+  L+PGV++VH  DG  T
Sbjct: 33  NQMSFTFASPTQVYFNSANVKQVDVPTQSGAFGILAAHVPTLQVLRPGVVTVHAEDGTAT 92

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           K YFVSSG   ++A+S   ++A EAV +D +D ++ +  L + N +LS  + +  +AE  
Sbjct: 93  K-YFVSSGSVTVNADSSVQLLAEEAVSLDMLDLAVAKSNLEKANSELSGVSDEAARAEVL 151

Query: 186 IGVDVHSALNSAL 198
           I ++ + A+  AL
Sbjct: 152 IRIEANEAIVKAL 164


>gi|444321775|ref|XP_004181543.1| hypothetical protein TBLA_0G00770 [Tetrapisispora blattae CBS 6284]
 gi|387514588|emb|CCH62024.1| hypothetical protein TBLA_0G00770 [Tetrapisispora blattae CBS 6284]
          Length = 166

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD--GNDTKK 127
           L   F LP+   +  K V  V +P  +GQ+G+L  HVP   +L PG++ V +   ND  K
Sbjct: 36  LKFQFALPHEVLVDGKTVKQVNLPVRSGQIGILANHVPITEQLDPGLIEVFEEGQNDPTK 95

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YFVS GFA +  +S   + +VEA P++      +   LAE  +K+S +    E AEA I 
Sbjct: 96  YFVSGGFASMQPDSTLCVTSVEAFPLESFSKDKISSLLAE-AKKISESKEGKEAAEAAIQ 154

Query: 188 VDVHSALNSAL 198
           V+V   L SAL
Sbjct: 155 VEVLQKLQSAL 165


>gi|380488586|emb|CCF37276.1| ATP synthase subunit delta [Colletotrichum higginsianum]
          Length = 165

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 81/141 (57%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++P K+ ++  LP+ +   +++V  V +PA +G MGVL  HVP+I +LK G++ 
Sbjct: 24  RRTYADAVPDKIKLSLSLPHQAIYKSQDVVQVNIPAESGDMGVLANHVPSIEQLKSGLVE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +    K++F+S GFA +  NSV  I A E  PI+      V+  +AE  +  S + +
Sbjct: 84  VIEESGPNKQFFLSGGFAVVQPNSVLSINATEGYPIEDFSAETVKSLIAEAQKVASGSGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + + AEA++ ++V  +L + L
Sbjct: 144 EQDVAEAKVELEVLESLQAVL 164


>gi|367050486|ref|XP_003655622.1| hypothetical protein THITE_2119499 [Thielavia terrestris NRRL 8126]
 gi|347002886|gb|AEO69286.1| hypothetical protein THITE_2119499 [Thielavia terrestris NRRL 8126]
          Length = 165

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+ S   +++V  V +PA +G MG+L  HVP+I +LKPG + 
Sbjct: 24  RRGYAEAVSDKIKLSLSLPHQSIYRSQDVVQVNIPAESGDMGILANHVPSIEQLKPGFVE 83

Query: 119 -VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
            + +   +KK+F+S GFA +   S   I AVE  P++      V+  +AE  +  S   +
Sbjct: 84  IIEESGSSKKFFLSGGFAIVQPKSALSITAVEGYPLEDFSAEAVKAQIAEAQKVASGNGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
           + + AEA+I ++V  +L + L
Sbjct: 144 EQDIAEAKIELEVLESLQAHL 164


>gi|417396463|gb|JAA45265.1| Putative mitochondrial f1f0-atp synthase subunit delta/atp16
           [Desmodus rotundus]
          Length = 168

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 3/133 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
            +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T
Sbjct: 36  GQMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-T 94

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            KYFVSSG   ++A+S   ++A EAV +D +D +  +  L +   +LS A  +  +AE Q
Sbjct: 95  TKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLAAAKANLEKAQSELSGAADEAARAEIQ 154

Query: 186 IGVDVHSALNSAL 198
           I ++ + AL  AL
Sbjct: 155 IRIEANEALVKAL 167


>gi|224004096|ref|XP_002295699.1| F-type H-ATPase delta subunit [Thalassiosira pseudonana CCMP1335]
 gi|209585731|gb|ACI64416.1| F-type H-ATPase delta subunit [Thalassiosira pseudonana CCMP1335]
          Length = 137

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 1/94 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
           + +NF LP  +   A  V  V+VP + G+  V   HVP +AELK G+L++ H+G +++KY
Sbjct: 15  MKLNFNLPQETLYDAAPVKSVVVPGAMGEYEVTADHVPIVAELKAGMLTINHEGGESEKY 74

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ 162
           FV+ GF+  H  S  DI+  EAV +D ID + VQ
Sbjct: 75  FVAGGFSLTHEGSTTDIVCPEAVKLDDIDSAAVQ 108


>gi|323349498|gb|EGA83722.1| Atp16p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323355785|gb|EGA87599.1| Atp16p [Saccharomyces cerevisiae VL3]
          Length = 130

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 61/94 (64%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK+F
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFF 91

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           +S GFA +  +S   + A+EA P++      ++K
Sbjct: 92  ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKK 125


>gi|350420093|ref|XP_003492396.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Bombus impatiens]
          Length = 174

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 81/130 (62%), Gaps = 3/130 (2%)

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAEL 112
           Y+  + +T    P    + F L  A+++   E  +  V VP+ +G  G+LP HVPT+A L
Sbjct: 27  YIRNQKRTYADAPVSNEMKFTLAGANQVFYNESVIRQVDVPSFSGSFGILPKHVPTLAVL 86

Query: 113 KPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           KPGV++V++ + T KK FVSSG   I+ N+   I+A EA P++ +D +  ++ L++  Q+
Sbjct: 87  KPGVVTVYEEDGTVKKVFVSSGTVTINENNSVQILAEEAHPVENLDGTAARELLSKAQQQ 146

Query: 172 LSSATTDLEK 181
           LSSA+++ +K
Sbjct: 147 LSSASSEQDK 156


>gi|116207208|ref|XP_001229413.1| hypothetical protein CHGG_02897 [Chaetomium globosum CBS 148.51]
 gi|88183494|gb|EAQ90962.1| hypothetical protein CHGG_02897 [Chaetomium globosum CBS 148.51]
          Length = 164

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 82/140 (58%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+ S   +++   V +PA +G+MGVL  HVP+I +LK G++ 
Sbjct: 24  RRGYAEAVSDKIKLSLSLPHQSIYKSQDAVQVNIPAESGEMGVLANHVPSIEQLKAGIVE 83

Query: 119 VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V + + +K++F+S GFA +  NS   I AVE  P++      V+  ++E  +  + + ++
Sbjct: 84  VIEESGSKRFFLSGGFAVVQPNSALSINAVEGFPLEDFSADAVRAQISEAQKVANGSGSE 143

Query: 179 LEKAEAQIGVDVHSALNSAL 198
            + AEA+I ++V  +L + L
Sbjct: 144 QDIAEAKIELEVLESLQAHL 163


>gi|225714418|gb|ACO13055.1| ATP synthase subunit delta, mitochondrial precursor [Lepeophtheirus
           salmonis]
 gi|290561951|gb|ADD38373.1| ATP synthase subunit delta, mitochondrial [Lepeophtheirus salmonis]
          Length = 156

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 1/132 (0%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTK 126
           +++++ F  P     +   V  V +P+ +G  G+LP HVP++A LKPGV+SV  +  D  
Sbjct: 24  AEMSLTFAAPNGVHYNETIVKQVDIPSFSGSFGILPDHVPSLAVLKPGVISVFEETGDVA 83

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           K+FVSSG   I+A+S   I+A EA P+  +DP+  ++ L++    L+SA +D EKAEA+I
Sbjct: 84  KFFVSSGSVTINADSTVQILAEEAHPLADLDPAAAKQALSDAQASLASAASDAEKAEAEI 143

Query: 187 GVDVHSALNSAL 198
            V+    L  AL
Sbjct: 144 EVETAEELLKAL 155


>gi|323309489|gb|EGA62700.1| Atp16p [Saccharomyces cerevisiae FostersO]
          Length = 130

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 60/94 (63%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G ++KK+F
Sbjct: 32  LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGTNSKKFF 91

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           +S GFA +  +S   + A+EA P++      ++K
Sbjct: 92  ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKK 125


>gi|430812823|emb|CCJ29758.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 164

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 77/131 (58%), Gaps = 1/131 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKK 127
           K+ + F LP+    +A+ V  V +PA++G MG+L  HVP+I +L+PG++ V + N  + K
Sbjct: 33  KICLTFSLPHNVLYNAQNVTQVNIPATSGNMGILALHVPSIEQLRPGIVDVIEENGISNK 92

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA +   S   I A+EA  +D      V + L E  + +S   ++ + AEA+I 
Sbjct: 93  FFVSGGFAIVQPGSSLCINAIEAYSLDDFSLETVSEKLQEAQKIVSGNGSEEDIAEAKIQ 152

Query: 188 VDVHSALNSAL 198
           ++V  +L  +L
Sbjct: 153 IEVLESLRESL 163


>gi|12832230|dbj|BAB22016.1| unnamed protein product [Mus musculus]
          Length = 168

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P      +  V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 37  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVGVHTEDGT-TT 95

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 156 RIEANEALVKAL 167


>gi|355670485|gb|AER94764.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Mustela putorius furo]
          Length = 120

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 3/114 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A+S   
Sbjct: 8   VRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSVTVNADSSVQ 66

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           ++A EAV +D +D    +  L +   +LS AT +  +AE QI V+ + AL  AL
Sbjct: 67  LLAEEAVTLDMLDVGAAKVNLEKAQSELSGATDEASRAEIQIRVEANEALVKAL 120


>gi|350420090|ref|XP_003492395.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Bombus impatiens]
          Length = 161

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 81/130 (62%), Gaps = 3/130 (2%)

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAEL 112
           Y+  + +T    P    + F L  A+++   E  +  V VP+ +G  G+LP HVPT+A L
Sbjct: 14  YIRNQKRTYADAPVSNEMKFTLAGANQVFYNESVIRQVDVPSFSGSFGILPKHVPTLAVL 73

Query: 113 KPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           KPGV++V++ + T KK FVSSG   I+ N+   I+A EA P++ +D +  ++ L++  Q+
Sbjct: 74  KPGVVTVYEEDGTVKKVFVSSGTVTINENNSVQILAEEAHPVENLDGTAARELLSKAQQQ 133

Query: 172 LSSATTDLEK 181
           LSSA+++ +K
Sbjct: 134 LSSASSEQDK 143


>gi|147904284|ref|NP_001087284.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Xenopus laevis]
 gi|51593674|gb|AAH78510.1| MGC85306 protein [Xenopus laevis]
          Length = 162

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 4/122 (3%)

Query: 78  YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAF 136
           + S  S K+VD   VP  TG  G+LP HVPT+  L+PG+++V  D     KYFVSSG   
Sbjct: 43  FYSGASVKQVD---VPTLTGMFGILPAHVPTLQVLRPGLVTVFSDDGVATKYFVSSGSVT 99

Query: 137 IHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNS 196
           ++A+S   ++A EAV +D +D S  +  L +   +L SA  +  KAEA I V+   A+  
Sbjct: 100 VNADSSVQLLAEEAVTLDMLDLSTAKSNLEKAQAELQSAGDEAAKAEALINVEASEAIVK 159

Query: 197 AL 198
           AL
Sbjct: 160 AL 161


>gi|410949901|ref|XP_003981655.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Felis catus]
          Length = 168

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TS 95

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQI 155

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 156 RIEANEALVKAL 167


>gi|301776318|ref|XP_002923558.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 168

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 37  QMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TS 95

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQI 155

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 156 RIEANEALVKAL 167


>gi|46124541|ref|XP_386824.1| hypothetical protein FG06648.1 [Gibberella zeae PH-1]
          Length = 289

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 78/128 (60%), Gaps = 1/128 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           + ++  LP+ S   + +V  V +PA +G+MGVL  HVP+I +LKPG++  V +   +K++
Sbjct: 159 IKLSLALPHQSIYKSHDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVVEESAGSKQF 218

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F+S GFA +  NSV  I AVE  P++      ++  +AE  +  + + ++ + AEA+I +
Sbjct: 219 FLSGGFATVQPNSVLSINAVEGYPLEDFSAEAIRAQIAEAQKVANGSGSEQDIAEAKIEL 278

Query: 189 DVHSALNS 196
           +V   L++
Sbjct: 279 EVLETLSA 286


>gi|310791486|gb|EFQ27013.1| ATP synthase [Glomerella graminicola M1.001]
          Length = 161

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
           + ++  LP+ S   +++V  V +PA +G+MGVL  HVP+I +LK G++ +  +   +K++
Sbjct: 31  IKLSLSLPHQSIYKSQDVVQVNIPAESGEMGVLANHVPSIEQLKSGLVEIIEESGPSKQF 90

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F+S GFA +  NSV  I A E  P++      V+  +AE  +  S + ++ + AEA+I +
Sbjct: 91  FLSGGFAVVQPNSVLSINATEGYPLEDFSAEAVKSQIAEAQKVASGSGSEQDIAEAKIEL 150

Query: 189 DVHSALNSAL 198
           +V  +L +AL
Sbjct: 151 EVLESLQAAL 160


>gi|164429048|ref|XP_957271.2| ATP synthase delta chain, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|51704300|sp|P56525.2|ATPD_NEUCR RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|157072387|gb|EAA28035.2| ATP synthase delta chain, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|336469929|gb|EGO58091.1| ATP synthase subunit delta, mitochondrial [Neurospora tetrasperma
           FGSC 2508]
 gi|350290386|gb|EGZ71600.1| ATP synthase delta chain mitochondrial precursor [Neurospora
           tetrasperma FGSC 2509]
          Length = 165

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 1/141 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  LP+ +   +++V  V +PA +G+MGVL  HVP+I +LKPG++ 
Sbjct: 24  RRGYAEAVADKIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +    K+YF+S GFA +   S   I AVE   ++      V+  +AE  + +S   +
Sbjct: 84  VIEESGSNKQYFLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAEAQKIVSGGGS 143

Query: 178 DLEKAEAQIGVDVHSALNSAL 198
             + AEAQ+ ++V  +L + L
Sbjct: 144 QQDIAEAQVELEVLESLQAVL 164


>gi|212539488|ref|XP_002149899.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
 gi|210067198|gb|EEA21290.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
          Length = 165

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     ++  K+ ++  +P+ +   + +V  V +PA +G+MG+L  HVP+I +LKPG++ 
Sbjct: 24  RRTYADAVADKIKLSLAMPHQNLFKSTDVVQVNIPAESGEMGILANHVPSIEQLKPGLVE 83

Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           V  +   TK++F+S GFA +  +S   I AVEA P++      ++  +AE  +  + + +
Sbjct: 84  VIEESGSTKQFFLSGGFAVVQPDSRLSINAVEAYPLEDFSADAIRSQIAEAQKIANGSGS 143

Query: 178 DLEKAEAQIGVDVHSALN 195
           + + AEA+I ++V   L 
Sbjct: 144 EQDIAEAKIELEVLETLQ 161


>gi|345787415|ref|XP_533962.2| PREDICTED: uncharacterized protein LOC476756 isoform 1 [Canis lupus
           familiaris]
          Length = 606

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-K 126
            +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  + T  
Sbjct: 474 GQMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTIS 533

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 534 KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDVGAAKMNLEKAQSELSGAADEASRAEIQI 593

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 594 RIEANEALVKAL 605


>gi|400602444|gb|EJP70046.1| ATP synthase delta chain [Beauveria bassiana ARSEF 2860]
          Length = 165

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 1/133 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGN 123
           +IP K+ ++  LP+ +   ++ V  V +PA +G+MGVL  H P+I +LKPGV+  V +  
Sbjct: 30  AIPDKIKLSLSLPHQTIFKSQNVVQVNLPAESGEMGVLANHAPSIEQLKPGVVEVVEESG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            TK +F+S GFA +  +S   I A EA P++      ++  ++E  +  S + ++ + AE
Sbjct: 90  STKSFFLSGGFATVQPDSALSINAPEAYPLEDFSAEAIRNQISEAQKIASGSGSEQDIAE 149

Query: 184 AQIGVDVHSALNS 196
           A+I ++V   L +
Sbjct: 150 AKIELEVLETLQA 162


>gi|166851828|ref|NP_079589.2| ATP synthase subunit delta, mitochondrial precursor [Mus musculus]
 gi|78099820|sp|Q9D3D9.1|ATPD_MOUSE RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|12857538|dbj|BAB31035.1| unnamed protein product [Mus musculus]
 gi|14198434|gb|AAH08273.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Mus musculus]
 gi|71059683|emb|CAJ18385.1| Atp5d [Mus musculus]
 gi|74139156|dbj|BAE38468.1| unnamed protein product [Mus musculus]
 gi|74185364|dbj|BAE30157.1| unnamed protein product [Mus musculus]
 gi|74199270|dbj|BAE33165.1| unnamed protein product [Mus musculus]
 gi|148699645|gb|EDL31592.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_c [Mus musculus]
          Length = 168

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P      +  V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 37  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGT-TT 95

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 156 RIEANEALVKAL 167


>gi|212539490|ref|XP_002149900.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
 gi|210067199|gb|EEA21291.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces marneffei ATCC 18224]
          Length = 190

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           ++  K+ ++  +P+ +   + +V  V +PA +G+MG+L  HVP+I +LKPG++ V  +  
Sbjct: 30  AVADKIKLSLAMPHQNLFKSTDVVQVNIPAESGEMGILANHVPSIEQLKPGLVEVIEESG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            TK++F+S GFA +  +S   I AVEA P++      ++  +AE  +  + + ++ + AE
Sbjct: 90  STKQFFLSGGFAVVQPDSRLSINAVEAYPLEDFSADAIRSQIAEAQKIANGSGSEQDIAE 149

Query: 184 AQIGVDVHSALNSA 197
           A+I ++V    +SA
Sbjct: 150 AKIELEVCLIASSA 163


>gi|351699546|gb|EHB02465.1| ATP synthase subunit delta, mitochondrial [Heterocephalus glaber]
          Length = 168

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 37  QMSFTFASPTQVFFNRANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGT-TT 95

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 96  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGTARANLEKAQSELSGAADEASRAEIQI 155

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 156 RIEANEALVKAL 167


>gi|348550383|ref|XP_003461011.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Cavia
           porcellus]
          Length = 168

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 3/133 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
           S+++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ V+  DG  T
Sbjct: 36  SQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVYAEDGT-T 94

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            KYFVSSG   ++A+S   ++A EAV +D +D  + +  L +   +LS  + +  +AE Q
Sbjct: 95  TKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGMARANLEKAQSELSGVSDEAARAEIQ 154

Query: 186 IGVDVHSALNSAL 198
           I ++ + AL  AL
Sbjct: 155 IRIEANEALVKAL 167


>gi|344230589|gb|EGV62474.1| epsilon subunit of F1F0-ATP synthase N-terminal domain-containing
           protein [Candida tenuis ATCC 10573]
          Length = 159

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           L ++  LP+ +  S  EV+ V +P+  G +G+L  H+P + +L+PG+L  +  G +T++Y
Sbjct: 30  LKLSLALPHQTLYSDSEVEQVNLPSVNGDLGILANHIPIVEQLRPGLLEIISKGGETEQY 89

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS G A +   +   I A+EA   DQ D + V K L    QK +S++ ++E AEA I +
Sbjct: 90  FVSGGIATVQPGNKLTISAIEAFKPDQFDVNEV-KNLISDAQKRASSSDEVEAAEASIEL 148

Query: 189 DVHSALNS 196
           +V  AL +
Sbjct: 149 EVLEALQT 156


>gi|324510963|gb|ADY44575.1| ATP synthase subunit delta [Ascaris suum]
          Length = 173

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 3/134 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD--GNDTK 126
           +L + F  P  +  +   +  V VP   G +GVL  HVPT+  LKPGV+ + D  GN TK
Sbjct: 39  ELKLIFAAPDRAFFTDTVIKQVDVPTVAGVVGVLAKHVPTLGVLKPGVVQITDLDGNQTK 98

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
             FVSSG   ++ +    ++A EAVP++ ID SL ++ L    +++    ++++KAEA I
Sbjct: 99  -MFVSSGTFSMNIDGTCQVLAEEAVPVEDIDESLARQELEAAQRRIQEGGSEVDKAEAAI 157

Query: 187 GVDVHSALNSALTG 200
            ++V  AL  A+ G
Sbjct: 158 TIEVCEALIKAVHG 171


>gi|197127889|gb|ACH44387.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
          Length = 166

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 3/138 (2%)

Query: 63  PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-- 120
           P   P+ +   F  P     +   V  V VP  TG  G+L  HVPT+  L+PGV++VH  
Sbjct: 29  PAGGPAAMAFTFASPTQVFYNGANVKQVDVPTLTGSFGILASHVPTLQVLRPGVVTVHAE 88

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           DG  TK YFVSSG   +HA+S   ++A EAV +D +D +  +  L +   ++++A+ +  
Sbjct: 89  DGTATK-YFVSSGSVSVHADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAA 147

Query: 181 KAEAQIGVDVHSALNSAL 198
           KAEAQI V+V+ AL  AL
Sbjct: 148 KAEAQIKVEVNEALVKAL 165


>gi|387762615|ref|NP_001248618.1| ATP synthase subunit delta, mitochondrial [Macaca mulatta]
 gi|380813460|gb|AFE78604.1| ATP synthase subunit delta, mitochondrial precursor [Macaca
           mulatta]
 gi|383418933|gb|AFH32680.1| ATP synthase subunit delta, mitochondrial precursor [Macaca
           mulatta]
          Length = 168

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 3/134 (2%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGND 124
           P++++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  
Sbjct: 35  PNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGT- 93

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE 
Sbjct: 94  TSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGAADEATRAEI 153

Query: 185 QIGVDVHSALNSAL 198
           QI ++ + AL  AL
Sbjct: 154 QIRIEANEALVKAL 167


>gi|432101156|gb|ELK29440.1| ATP synthase subunit delta, mitochondrial [Myotis davidii]
          Length = 369

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 3/119 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
            +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A
Sbjct: 183 FNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSVTVNA 241

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           +S   ++A EAV +D +D    +  L +   +LS A+ +  +AE QI ++ + AL  AL
Sbjct: 242 DSSVQLLAEEAVSLDMLDLGAAKANLEKAQSELSGASDEAMRAEIQIRIEANEALVKAL 300



 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%)

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           + N+     + SG   ++A+S   ++A EAV +D +D    +  L +   +LS A+ +  
Sbjct: 291 EANEALVKALDSGSVTVNADSSVQLLAEEAVSLDMLDLGAAKANLEKAQSELSGASDEAM 350

Query: 181 KAEAQIGVDVHSALNSAL 198
           +AE QI ++ + AL  AL
Sbjct: 351 RAEIQIRIEANEALVKAL 368


>gi|402903541|ref|XP_003914622.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 1
           [Papio anubis]
 gi|402903543|ref|XP_003914623.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 2
           [Papio anubis]
          Length = 168

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 3/134 (2%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGND 124
           P++++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  
Sbjct: 35  PNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGT- 93

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE 
Sbjct: 94  TSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGAADEATRAEI 153

Query: 185 QIGVDVHSALNSAL 198
           QI ++ + AL  AL
Sbjct: 154 QIRIEANEALVKAL 167


>gi|366998445|ref|XP_003683959.1| hypothetical protein TPHA_0A04520 [Tetrapisispora phaffii CBS 4417]
 gi|357522254|emb|CCE61525.1| hypothetical protein TPHA_0A04520 [Tetrapisispora phaffii CBS 4417]
          Length = 167

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 62  TPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD 121
           T +++ + L + F LP+        V  V +P  +GQ+GVL  HVP   +L PGV+ + +
Sbjct: 28  TSSALNTGLKLQFALPHEILFKDVTVTQVNLPVKSGQIGVLANHVPMAEQLIPGVVEIFE 87

Query: 122 --GNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
              N T KK+FVS GFA +  NS   I +VEA P++      V+  L E N+  +S+   
Sbjct: 88  EATNSTPKKFFVSGGFATVQPNSTLSITSVEAFPLESFSIENVKNLLVEANKNKTSSDEK 147

Query: 179 LEKAEAQIGVDVHSALNSAL 198
           +  AEA I VDV  AL +AL
Sbjct: 148 I-AAEAAIQVDVLEALEAAL 166


>gi|354480846|ref|XP_003502614.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Cricetulus griseus]
 gi|344243386|gb|EGV99489.1| ATP synthase subunit delta, mitochondrial [Cricetulus griseus]
          Length = 167

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P         V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 36  QMSFTFASPTQVFFDGVNVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGT-TT 94

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS  T +  +AE QI
Sbjct: 95  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKARSELSGTTDEAARAEIQI 154

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 155 CIEANEALVKAL 166


>gi|383862935|ref|XP_003706938.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Megachile rotundata]
          Length = 160

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 66/96 (68%), Gaps = 1/96 (1%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVSSGFAFIHANSVADI 145
           V  + VP+ +G  G+LP HVPT+A LKPGV++V++ G  TKK FVSSG   I+ N+   +
Sbjct: 47  VKQIDVPSFSGSFGILPKHVPTLAVLKPGVVTVYEEGGATKKIFVSSGTVTINENNSVQV 106

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
           +A EA P++ ID S  +  L++  Q+LSSA+++ ++
Sbjct: 107 LAEEAHPVENIDNSAARDILSKAQQQLSSASSEKDR 142


>gi|239788326|dbj|BAH70851.1| ACYPI007021 [Acyrthosiphon pisum]
          Length = 161

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 77/127 (60%), Gaps = 6/127 (4%)

Query: 61  QTPTSIPSKL---TVNFVLPYASEL--SAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
           Q PT   S+     +NF    A+++  + K +  V VP+ +G  G+LP HVPT+A L+PG
Sbjct: 16  QGPTKCFSRNYADQMNFTFAAANQIFYANKNIKQVDVPSFSGSFGILPNHVPTLAVLRPG 75

Query: 116 VLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           V++V++   T KK FVSSG   ++ +S   ++A EA PI+ ID S  ++ L E   +LS+
Sbjct: 76  VVTVYEDEGTSKKIFVSSGTITVNEDSSVQVLAEEAHPIEDIDGSAARQVLQEAQSQLST 135

Query: 175 ATTDLEK 181
           A+ D+ K
Sbjct: 136 ASGDVAK 142


>gi|431922218|gb|ELK19309.1| ATP synthase subunit delta, mitochondrial [Pteropus alecto]
          Length = 131

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
           ++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T K
Sbjct: 1   MSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSK 59

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI 
Sbjct: 60  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEAARAEIQIR 119

Query: 188 VDVHSALNSAL 198
           ++   AL  AL
Sbjct: 120 IEASEALVKAL 130


>gi|340720179|ref|XP_003398519.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 2
           [Bombus terrestris]
          Length = 174

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 80/130 (61%), Gaps = 3/130 (2%)

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAEL 112
           Y+  + +T    P    + F L  A+++   E  V  V VP+ +G  G+LP HVPT+A L
Sbjct: 27  YIRNQKRTFADAPVSNEMKFTLAGANQVFYDESVVKQVDVPSFSGSFGILPKHVPTLAVL 86

Query: 113 KPGVLSVHDGND-TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           KPGV++V++ +   KK FVSSG   I+ N+   I+A EA P++ +D +  ++ L++  Q+
Sbjct: 87  KPGVVTVYEEDGAVKKVFVSSGTVTINENNSVQILAEEAHPLENLDGTAARELLSKAQQQ 146

Query: 172 LSSATTDLEK 181
           LSSA+++ +K
Sbjct: 147 LSSASSEQDK 156


>gi|403308177|ref|XP_003944548.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Saimiri
           boliviensis boliviensis]
          Length = 170

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 3/114 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A+S   
Sbjct: 57  VRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSVTVNADSSVQ 115

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           ++A EAV +D +D    +  L +   +LS A  +  +AE QI ++ + AL  AL
Sbjct: 116 LLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEATRAEIQIRIEANEALVKAL 169


>gi|338728774|ref|XP_001917966.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like, partial
           [Equus caballus]
          Length = 142

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 3/114 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A+S   
Sbjct: 29  VRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSVTVNADSSVQ 87

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           ++A EAV +D +D    +  L +   +LS A  +  +AE QI ++ + AL  AL
Sbjct: 88  LLAEEAVTLDMLDLGAAKANLEKAQSELSGAADEAARAEIQIRIEANEALVKAL 141


>gi|426229491|ref|XP_004008824.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Ovis aries]
          Length = 168

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 3/133 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
            +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T
Sbjct: 36  GQMSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-T 94

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE Q
Sbjct: 95  SKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQ 154

Query: 186 IGVDVHSALNSAL 198
           I ++ + AL  AL
Sbjct: 155 IRIEANEALVKAL 167


>gi|358366829|dbj|GAA83449.1| ATP synthase delta chain, mitochondrial precursor [Aspergillus
           kawachii IFO 4308]
          Length = 176

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 14/161 (8%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVD-----------MVIVPASTGQ 98
           PS +  P  R     ++  K+ ++  LP+ S   +  V             V +PA +G+
Sbjct: 15  PSAFRVPLQRRGYAEAVSDKIKLSLTLPHQSIFKSTGVPPHTYEPFPYSVQVNIPAESGE 74

Query: 99  MGVLPGHVPTIAELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
           MGVL  HVP+I +LKPG++  V +G  +KK+F+S GFA +  +S   I AVE  P+++  
Sbjct: 75  MGVLANHVPSIEQLKPGLVEIVEEGGASKKFFLSGGFAVVQPDSQLSINAVEGFPLEEFS 134

Query: 158 PSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
              V+  +AE  +  + + ++ + AEA+I ++V  +L + L
Sbjct: 135 IDNVRSQIAEAQKIANGSGSEQDIAEAKIELEVLESLQAVL 175


>gi|444509536|gb|ELV09331.1| ATP synthase subunit delta, mitochondrial [Tupaia chinensis]
          Length = 122

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 3/119 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
            S   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A
Sbjct: 4   FSGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSVTVNA 62

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           +S   ++A EAV +D +D    +  L     +LS A  +  +AE QI ++ + AL  AL
Sbjct: 63  DSSVQLLAEEAVTLDMLDLGAAKANLERAQAELSGAADEARRAEVQILIEANEALVKAL 121


>gi|340720177|ref|XP_003398518.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Bombus terrestris]
          Length = 161

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 80/130 (61%), Gaps = 3/130 (2%)

Query: 55  YMTPRPQTPTSIPSKLTVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAEL 112
           Y+  + +T    P    + F L  A+++   E  V  V VP+ +G  G+LP HVPT+A L
Sbjct: 14  YIRNQKRTFADAPVSNEMKFTLAGANQVFYDESVVKQVDVPSFSGSFGILPKHVPTLAVL 73

Query: 113 KPGVLSVHDGND-TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           KPGV++V++ +   KK FVSSG   I+ N+   I+A EA P++ +D +  ++ L++  Q+
Sbjct: 74  KPGVVTVYEEDGAVKKVFVSSGTVTINENNSVQILAEEAHPLENLDGTAARELLSKAQQQ 133

Query: 172 LSSATTDLEK 181
           LSSA+++ +K
Sbjct: 134 LSSASSEQDK 143


>gi|193709035|ref|XP_001943366.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like isoform 1
           [Acyrthosiphon pisum]
          Length = 161

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 6/127 (4%)

Query: 61  QTPTSIPSKL---TVNFVLPYASEL--SAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
           Q PT   S+     +NF    A+++  + K +  V VP+ +G  G+LP HVPT+A L+PG
Sbjct: 16  QGPTKCFSRNYADQMNFTFAAANQIFYANKNIKQVDVPSFSGSFGILPNHVPTLAVLRPG 75

Query: 116 VLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           +++V++   T KK FVSSG   ++ +S   ++A EA PI+ ID S  ++ L E   +LS+
Sbjct: 76  IVTVYEDEGTSKKIFVSSGTITVNEDSSVQVLAEEAHPIEDIDGSAARQVLQEAQSQLST 135

Query: 175 ATTDLEK 181
           A+ D+ K
Sbjct: 136 ASGDVAK 142


>gi|126276303|ref|XP_001386981.1| ATP synthase delta subunit [Scheffersomyces stipitis CBS 6054]
 gi|126212850|gb|EAZ62958.1| ATP synthase delta subunit [Scheffersomyces stipitis CBS 6054]
          Length = 161

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 40/197 (20%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFRQA R +A+ S+    R+++++  A+ A D+                           
Sbjct: 1   MFRQALRQVAKQSSTVVRRSYATE--ASTASDA--------------------------- 31

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-V 119
                    L ++  LP+ +  S  EV+ V +P+  G +G+L  H+P + +L+PG+L  +
Sbjct: 32  ---------LKLSLALPHQTLYSESEVEQVNLPSVNGDLGILANHIPIVEQLRPGLLEII 82

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
             G +T++YFVS G A +   +   I A+EA   DQ D   V+  +A+  QK +++T ++
Sbjct: 83  SKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPDQFDAQAVKNLIAD-AQKRAASTDEV 141

Query: 180 EKAEAQIGVDVHSALNS 196
             AEA I ++V  AL++
Sbjct: 142 VVAEANIELEVLEALHN 158


>gi|408399011|gb|EKJ78136.1| hypothetical protein FPSE_01597 [Fusarium pseudograminearum CS3096]
          Length = 1713

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           + ++  LP+ S   + +V  V +PA +G+MGVL  HVP+I +LKPG++  V +   +K++
Sbjct: 714 IKLSLALPHQSIYKSHDVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEVVEESAGSKQF 773

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F+S GFA +  NSV  I AVE  P++      ++  +AE  +  + + ++ + AEA+I +
Sbjct: 774 FLSGGFATVQPNSVLSINAVEGYPLEDFSAEAIRAQIAEAQKVANGSGSEQDIAEAKIEL 833

Query: 189 D 189
           +
Sbjct: 834 E 834


>gi|197127888|gb|ACH44386.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
          Length = 166

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 63  PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-- 120
           P   P+ +   F  P     +   V  V VP  TG  G+L  HVPT+  L+PGV++VH  
Sbjct: 29  PAGGPAAMAFTFASPTQVFYNGANVKQVDVPTLTGSFGILASHVPTLQVLRPGVVTVHAE 88

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           DG  TK YFVSSG   +HA+S   ++A EAV +D +D +  +  L +   ++++A+ +  
Sbjct: 89  DGTATK-YFVSSGSVSVHADSTVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAA 147

Query: 181 KAEAQIGVDVHSALNSAL 198
           KAEAQI V+ + AL  AL
Sbjct: 148 KAEAQIKVEANEALVKAL 165


>gi|28603800|ref|NP_788843.1| ATP synthase subunit delta, mitochondrial precursor [Bos taurus]
 gi|114579|sp|P05630.2|ATPD_BOVIN RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|262118401|pdb|2W6I|H Chain H, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118410|pdb|2W6J|H Chain H, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262306988|pdb|2W6H|H Chain H, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|110|emb|CAA34885.1| ATP synthase [Bos taurus]
 gi|148878475|gb|AAI46209.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Bos taurus]
 gi|296485359|tpg|DAA27474.1| TPA: ATP synthase subunit delta, mitochondrial precursor [Bos
           taurus]
          Length = 168

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
           ++  F  P     ++  V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T K
Sbjct: 38  MSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSK 96

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE QI 
Sbjct: 97  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIR 156

Query: 188 VDVHSALNSAL 198
           ++ + AL  AL
Sbjct: 157 IEANEALVKAL 167


>gi|306991571|pdb|2XND|H Chain H, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
          Length = 131

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P     ++  V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 1   QMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TS 59

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE QI
Sbjct: 60  KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQI 119

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 120 RIEANEALVKAL 131


>gi|425766735|gb|EKV05334.1| ATP synthase delta chain, mitochondrial, putative [Penicillium
           digitatum Pd1]
 gi|425775257|gb|EKV13535.1| ATP synthase delta chain, mitochondrial, putative [Penicillium
           digitatum PHI26]
          Length = 165

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 3/148 (2%)

Query: 52  PSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           PS    P  R     ++  K+ ++  LP+ +   +  V  V +PA++G+MGVL  HVP I
Sbjct: 15  PSFLGAPVQRRGYAEAVADKIKLSLTLPHQTIYRSTGVTQVNIPAASGEMGVLANHVPAI 74

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +LKPG++  + +   TK+YF+S GFA +  +S   I AVE   ++      ++  +AE 
Sbjct: 75  EQLKPGLVEIIEESGATKQYFLSGGFAVVQPDSQLSINAVEGFALEDFSADAIRAQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNS 196
            +  S + ++ + AEA+I ++V   L +
Sbjct: 135 QKIASGSGSEQDIAEAKIELEVLETLQA 162


>gi|281341351|gb|EFB16935.1| hypothetical protein PANDA_012737 [Ailuropoda melanoleuca]
          Length = 122

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 3/114 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A+S   
Sbjct: 9   VRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSVTVNADSSVQ 67

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           ++A EAV +D +D    +  L +   +LS A  +  +AE QI ++ + AL  AL
Sbjct: 68  LLAEEAVTLDMLDVGAAKVNLEKAQSELSGAADEASRAEIQIRIEANEALVKAL 121


>gi|4502297|ref|NP_001678.1| ATP synthase subunit delta, mitochondrial precursor [Homo sapiens]
 gi|50345991|ref|NP_001001975.1| ATP synthase subunit delta, mitochondrial precursor [Homo sapiens]
 gi|114674401|ref|XP_001147365.1| PREDICTED: ATP synthase subunit delta, mitochondrial isoform 1 [Pan
           troglodytes]
 gi|584812|sp|P30049.2|ATPD_HUMAN RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|2911258|gb|AAC04304.1|AAC04304 ATPD_HUMAN [Homo sapiens]
 gi|12586|emb|CAA45016.1| H(+)-transporting ATP synthase [Homo sapiens]
 gi|12588|emb|CAA45017.1| H(+)-transporting ATP synthase [Homo sapiens]
 gi|247205|gb|AAA08055.1| mitochondrial ATP synthase complex delta-subunit precusor [Homo
           sapiens]
 gi|12803169|gb|AAH02389.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Homo sapiens]
 gi|13325214|gb|AAH04426.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Homo sapiens]
 gi|17390171|gb|AAH18079.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Homo sapiens]
 gi|49457430|emb|CAG47014.1| ATP5D [Homo sapiens]
 gi|82466497|gb|ABB76284.1| mitochondrial ATP synthase complex delta-subunit precusor [Homo
           sapiens]
 gi|119589938|gb|EAW69532.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Homo sapiens]
 gi|119589939|gb|EAW69533.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Homo sapiens]
 gi|119589940|gb|EAW69534.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Homo sapiens]
 gi|410225900|gb|JAA10169.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
 gi|410225902|gb|JAA10170.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
 gi|410302936|gb|JAA30068.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
          Length = 168

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DG 122
           S P++++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG
Sbjct: 33  SGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDG 92

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
             T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L     +  +A
Sbjct: 93  T-TSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRA 151

Query: 183 EAQIGVDVHSALNSAL 198
           E QI ++ + AL  AL
Sbjct: 152 EIQIRIEANEALVKAL 167


>gi|297702943|ref|XP_002828417.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit delta,
           mitochondrial [Pongo abelii]
          Length = 168

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DG 122
           S P++++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG
Sbjct: 33  SGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAXDG 92

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
             T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L     +  +A
Sbjct: 93  T-TSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELLGTADEATRA 151

Query: 183 EAQIGVDVHSALNSAL 198
           E QI ++ + AL  AL
Sbjct: 152 EIQIRIEANEALVKAL 167


>gi|20806153|ref|NP_620806.1| ATP synthase subunit delta, mitochondrial precursor [Rattus
           norvegicus]
 gi|1352036|sp|P35434.2|ATPD_RAT RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|457929|gb|AAC28872.1| delta subunit of F1F0 ATPase [Rattus norvegicus]
          Length = 168

 Score = 79.0 bits (193), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
            +++  F  P         V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T
Sbjct: 36  GQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGT-T 94

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            KYFVSSG   ++A+S   ++A E V +D +D    +  L +   +LS A  +  +AE Q
Sbjct: 95  TKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQ 154

Query: 186 IGVDVHSALNSAL 198
           I ++ + AL  AL
Sbjct: 155 IRIEANEALVKAL 167


>gi|440910417|gb|ELR60215.1| ATP synthase subunit delta, mitochondrial, partial [Bos grunniens
           mutus]
          Length = 169

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
           ++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T K
Sbjct: 39  MSFTFASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSK 97

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE QI 
Sbjct: 98  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIR 157

Query: 188 VDVHSALNSAL 198
           ++ + AL  AL
Sbjct: 158 IEANEALVKAL 168


>gi|354545659|emb|CCE42386.1| hypothetical protein CPAR2_200290 [Candida parapsilosis]
          Length = 161

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 40/196 (20%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFRQ+ R +A+ S     R ++++  AAP+ D+                           
Sbjct: 1   MFRQSFRQVAKQSISAVRRTYATE--AAPSSDA--------------------------- 31

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-V 119
                    L ++  LP+ +  +  EV+ V +P+  G +G+L  H+P + +L+PG+L  +
Sbjct: 32  ---------LKLSLALPFQTLYADSEVEQVNLPSVNGDLGILANHIPIVEQLRPGLLEII 82

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
             G +T++YFVS G A +   +   I A+EA   DQID S V+  +A+  QK + +  + 
Sbjct: 83  SKGGETEQYFVSGGIAMVQPGNKLTISAIEAFKPDQIDASAVKNLIAD-AQKRAESGDET 141

Query: 180 EKAEAQIGVDVHSALN 195
             AEA I ++V  AL 
Sbjct: 142 VAAEANIELEVLEALQ 157


>gi|149390811|gb|ABR25423.1| ATP synthase delta chain [Oryza sativa Indica Group]
          Length = 46

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/46 (80%), Positives = 42/46 (91%)

Query: 155 QIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
           QIDP+ VQ+GLAEFN KL SA+T+LEKAEAQIGVDVHSALN+AL G
Sbjct: 1   QIDPAAVQQGLAEFNAKLGSASTELEKAEAQIGVDVHSALNAALAG 46


>gi|405118259|gb|AFR93033.1| ATP synthase delta chain [Cryptococcus neoformans var. grubii H99]
          Length = 136

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 34/135 (25%)

Query: 99  MGVLPGHVPTIAELKPGVLSV--HDGNDTKKYF--------------------------- 129
           MG+L  HVP++  L+PGV+ V   +G   KK+F                           
Sbjct: 1   MGILANHVPSVEALRPGVIEVIEENGQQGKKWFDATGGSTDISKLRAMFAPVYYALSRIK 60

Query: 130 -----VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
                 S+GFA +H N+   I AVEA P+D+  P  ++ GLA+ N+ L S   + EKAEA
Sbjct: 61  GGEIEFSAGFATVHGNNALTINAVEAYPLDKFSPESIKSGLADANRVLGSNAPESEKAEA 120

Query: 185 QIGVDVHSALNSALT 199
           +I VDV+  L +AL+
Sbjct: 121 RIEVDVYEGLQAALS 135


>gi|426386437|ref|XP_004059691.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Gorilla
           gorilla gorilla]
          Length = 168

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DG 122
           S P++++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG
Sbjct: 33  SGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDG 92

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
             T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L     +  +A
Sbjct: 93  T-TSKYFVSSGSVAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRA 151

Query: 183 EAQIGVDVHSALNSAL 198
           E QI ++   AL  AL
Sbjct: 152 EIQIRIEASEALVKAL 167


>gi|328796228|gb|AEB40303.1| mitochondrial ATP synthase delta subunit precursor [Litopenaeus
           vannamei]
          Length = 158

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 70/109 (64%), Gaps = 1/109 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADI 145
           V  V VP+ +G  G+LP HVP++A LKPGV++V +G+ T KK+FVSSG   I+ +S   I
Sbjct: 43  VRQVDVPSFSGSFGILPAHVPSLAVLKPGVMTVFEGDGTAKKFFVSSGIVTINEDSSVQI 102

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           +A EA  ++ +D +  +  L++   + ++A T+  KA+A I V+V   L
Sbjct: 103 LAEEAAGVEDLDLASARDLLSKAQSEANAAGTEEAKAQALIAVEVAEEL 151


>gi|448524841|ref|XP_003869023.1| subunit of the mitochondrial F1F0 ATP synthase [Candida
           orthopsilosis Co 90-125]
 gi|380353376|emb|CCG22886.1| subunit of the mitochondrial F1F0 ATP synthase [Candida
           orthopsilosis]
          Length = 161

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 40/195 (20%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFRQ+ R +A+ S     R ++++  AAP+ D+                           
Sbjct: 1   MFRQSFRQVAKQSISAVRRTYATE--AAPSSDA--------------------------- 31

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-V 119
                    L ++  LP+ +  +  EV+ V +P+  G +G+L  H+P + +L+PG+L  +
Sbjct: 32  ---------LKLSLALPFQTLYADSEVEQVNLPSVNGDLGILANHIPIVEQLRPGLLEII 82

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
             G +T++YFVS G A +   +   I A+EA   DQID S V+  +A+  QK + +  + 
Sbjct: 83  SKGGETEQYFVSGGIAMVQPGNKLTISAIEAFKPDQIDASAVKNLIAD-AQKRAESGDET 141

Query: 180 EKAEAQIGVDVHSAL 194
             AEA I ++V  AL
Sbjct: 142 VAAEANIELEVLEAL 156


>gi|149034587|gb|EDL89324.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Rattus norvegicus]
          Length = 168

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
            +++  F  P         V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T
Sbjct: 36  GQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGT-T 94

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            KYFVSSG   ++A+S   ++A E V +D +D    +  L +   +LS A  +  +AE Q
Sbjct: 95  TKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQ 154

Query: 186 IGVDVHSALNSAL 198
           I ++ + AL  AL
Sbjct: 155 IRIEANEALVKAL 167


>gi|242804375|ref|XP_002484362.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218717707|gb|EED17128.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 165

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 77/132 (58%), Gaps = 1/132 (0%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGN 123
           ++  K+ ++  +P+ S   + +V  V +PA +G+MG+L  HVP+I +LKPG++ V  +  
Sbjct: 30  AVADKIKLSLAMPHQSLFKSTDVVQVNIPAESGEMGILANHVPSIEQLKPGLVEVIEESG 89

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            TK++F+S GFA +  +S   I AVE  P++      ++  + E  +  + + ++ + AE
Sbjct: 90  GTKQFFLSGGFAVVQPDSRLSINAVEGYPLEDFSADAIRAQITEAQKIANGSGSEQDIAE 149

Query: 184 AQIGVDVHSALN 195
           A+I ++V   L 
Sbjct: 150 AKIELEVLETLQ 161


>gi|410250112|gb|JAA13023.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
 gi|410250114|gb|JAA13024.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit [Pan troglodytes]
          Length = 168

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DG 122
           S P+++   F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG
Sbjct: 33  SGPNQMAFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDG 92

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
             T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L     +  +A
Sbjct: 93  T-TSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRA 151

Query: 183 EAQIGVDVHSALNSAL 198
           E QI ++ + AL  AL
Sbjct: 152 EIQIRIEANEALVKAL 167


>gi|11514063|pdb|1E79|H Chain H, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|15825709|pdb|1H8E|H Chain H, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|109157337|pdb|2CK3|H Chain H, Azide Inhibited Bovine F1-Atpase
 gi|145579798|pdb|2JDI|H Chain H, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|158431073|pdb|2V7Q|H Chain H, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|268612205|pdb|2WSS|H Chain H, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612214|pdb|2WSS|Q Chain Q, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|392935596|pdb|4ASU|H Chain H, F1-Atpase In Which All Three Catalytic Sites Contain Bound
           Nucleotide, With Magnesium Ion Released In The Empty
           Site
          Length = 146

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
           ++  F  P     ++  V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T K
Sbjct: 16  MSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSK 74

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE QI 
Sbjct: 75  YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIR 134

Query: 188 VDVHSALNSAL 198
           ++ + AL  AL
Sbjct: 135 IEANEALVKAL 145


>gi|12847456|dbj|BAB27577.1| unnamed protein product [Mus musculus]
          Length = 168

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P      +  V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 37  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGT-TT 95

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVSS    ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 96  KYFVSSSSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155

Query: 187 GVDVHSALNSAL 198
            ++ + AL  AL
Sbjct: 156 RIEANEALVKAL 167


>gi|344307872|ref|XP_003422602.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Loxodonta africana]
          Length = 130

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 3/114 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A+S   
Sbjct: 17  VRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGT-TTKYFVSSGSVTVNADSSVQ 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           ++A EAV +D +D    +  L +   +LS A    ++AE QI ++   AL  AL
Sbjct: 76  LLAEEAVTLDMLDLGAAKANLEKAQAELSGAADGAQRAEIQIRIEAGEALVKAL 129


>gi|403218014|emb|CCK72506.1| hypothetical protein KNAG_0K01440 [Kazachstania naganishii CBS
           8797]
          Length = 157

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 10/136 (7%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTK 126
           ++L + F LP+ +      V  V +PA +G++GVL  H+PT+ +L PG++ +   G    
Sbjct: 26  NELKLQFSLPHETLYDGSTVTQVNLPAQSGKIGVLANHIPTVEQLSPGIVEILEQGKSPN 85

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDP----SLVQKGLAEFNQKLSSATTDLEKA 182
           KYF+S GFA +  +S   + AVEA P++   P    SL+ K   E N +     T     
Sbjct: 86  KYFISGGFATMQPDSTLCVTAVEAFPLESFSPDNVSSLLSKAKNELNSQDERVAT----- 140

Query: 183 EAQIGVDVHSALNSAL 198
           EA+I V V   L ++L
Sbjct: 141 EAKIQVHVLEELQASL 156


>gi|402820269|ref|ZP_10869836.1| hypothetical protein IMCC14465_10700 [alpha proteobacterium
           IMCC14465]
 gi|402511012|gb|EJW21274.1| hypothetical protein IMCC14465_10700 [alpha proteobacterium
           IMCC14465]
          Length = 128

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  +LT + V P     SA EVD+V VP S G  GVL  H P ++ L+PG++ V DG  T
Sbjct: 1   MSDRLTFDMVSPEKHLFSA-EVDVVTVPGSEGDFGVLANHSPMMSVLRPGIVLVEDGGTT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            +YFV  GFA +  + +  I+A +A+ +D  D   +Q  + +   ++ + T + +KAEA+
Sbjct: 60  TRYFVQGGFADVTPDGLT-ILAEQALAVDGDDKDALQDAVTQARSRVEAETDEQKKAEAE 118


>gi|320582824|gb|EFW97041.1| Delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Ogataea parapolymorpha DL-1]
          Length = 151

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 73/133 (54%), Gaps = 12/133 (9%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT- 125
           P  L V+ V P+           V +PAS+G+MGVL  HVPT+ EL PGV+ V + + T 
Sbjct: 29  PDVLKVSLVSPH----------QVNLPASSGEMGVLANHVPTVEELAPGVVEVIESSGTS 78

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            KYFVS GFA I   S   I  VEA P+D      ++  LAE  +  SSA   +  AEA 
Sbjct: 79  SKYFVSGGFASIVPGSKLSISTVEAHPLDAFSSENIKSLLAEAQKNASSADETV-AAEAA 137

Query: 186 IGVDVHSALNSAL 198
           I ++V  AL +A+
Sbjct: 138 IEIEVLEALQAAV 150


>gi|119189503|ref|XP_001245358.1| hypothetical protein CIMG_04799 [Coccidioides immitis RS]
 gi|303323029|ref|XP_003071506.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240111208|gb|EER29361.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320033316|gb|EFW15264.1| ATP synthase subunit delta [Coccidioides posadasii str. Silveira]
 gi|392868263|gb|EAS34022.2| ATP synthase subunit delta, mitochondrial [Coccidioides immitis RS]
          Length = 165

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 84/150 (56%), Gaps = 3/150 (2%)

Query: 52  PSVYMTPRPQT--PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           P+ +  P  Q     ++  KL ++ VLP+ +   + +V  V + A +G MG+L  HVP+I
Sbjct: 15  PAAFRLPIQQRTYAQAVSDKLRLSLVLPHETIYKSADVVQVNIAAESGDMGILSSHVPSI 74

Query: 110 AELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +L+PG++  + +   TKK+F++ GFA +  +S   I AVE   ++      V+  + E 
Sbjct: 75  EQLRPGLIEIIEESGQTKKFFLAGGFAVVQPDSNLSINAVEGFALEDFSADAVKSQIGEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  + + ++ + AEA++ ++V  +L +A+
Sbjct: 135 QRIAAGSGSEQDIAEAKVELEVLESLQAAM 164


>gi|258566011|ref|XP_002583750.1| ATP synthase F1, epsilon subunit [Uncinocarpus reesii 1704]
 gi|237907451|gb|EEP81852.1| ATP synthase F1, epsilon subunit [Uncinocarpus reesii 1704]
          Length = 173

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 82/143 (57%), Gaps = 3/143 (2%)

Query: 52  PSVYMTPRPQT--PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTI 109
           P+ +  P  Q     ++  KL ++ VLP+ +   + +V  V + A +G MG+L  HVP+I
Sbjct: 15  PAAFRVPIQQRTYAQAVAEKLRLSLVLPHETIYKSADVVQVNIAAESGDMGILSSHVPSI 74

Query: 110 AELKPGVLSVHDGN-DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEF 168
            +L+PG + + + N  TKK+F++ GFA +  +S   I AVE  P++      V+  +AE 
Sbjct: 75  EQLRPGPIEIIEENGQTKKFFLAGGFAVVQPDSNLSINAVEGFPLEDFSADAVKSQIAEA 134

Query: 169 NQKLSSATTDLEKAEAQIGVDVH 191
            + ++S  ++ + AEA++ ++ +
Sbjct: 135 QKVVASTGSEQDIAEAKVELERY 157


>gi|325092896|gb|EGC46206.1| ATP synthase subunit delta [Ajellomyces capsulatus H88]
          Length = 216

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 8/151 (5%)

Query: 51  TPSVYMTP--RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPT 108
           +PS +  P  R     ++  KL ++  + Y S     +V  V +PA +G MGVL  HVP+
Sbjct: 70  SPSTFRVPLQRRGYADAVADKLKLSLSI-YKS----TDVVQVNIPAESGVMGVLANHVPS 124

Query: 109 IAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
           I +L PG++ +  +   TK++F+S GFA +  +S   I AVEA P++      V+  +AE
Sbjct: 125 IEQLNPGLVEIIEESGGTKQFFLSGGFAVVQPDSQLSINAVEAYPLEDFSAEAVKAQIAE 184

Query: 168 FNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
             +  S   ++ + AEA+I ++V  +L +AL
Sbjct: 185 AQKVASGGGSEQDIAEAKIELEVLESLQAAL 215


>gi|336258868|ref|XP_003344240.1| hypothetical protein SMAC_12083 [Sordaria macrospora k-hell]
 gi|380091887|emb|CCC10616.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 173

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
           + ++  LP+ +   +++V  V +PA +G+MGVL  HVP+I +LKPG++ V  +    K+Y
Sbjct: 31  IKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVEVIEESGSNKQY 90

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F+S GFA +   S   I AVE   ++      V+  +AE  + +S   +  + AEAQ+ +
Sbjct: 91  FLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAEAQKIVSGGGSQQDIAEAQVEL 150

Query: 189 DVHSA 193
           +V S 
Sbjct: 151 EVSSG 155


>gi|302511427|ref|XP_003017665.1| hypothetical protein ARB_04547 [Arthroderma benhamiae CBS 112371]
 gi|291181236|gb|EFE37020.1| hypothetical protein ARB_04547 [Arthroderma benhamiae CBS 112371]
          Length = 216

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 21/148 (14%)

Query: 64  TSIPSKLTVNFVLP-------YASELSAKEVDMVI-----------VPASTGQMGVLPGH 105
           T++  KL ++ VLP       Y  + + K+   +I           + A +G MG+L  H
Sbjct: 29  TAVADKLKLSLVLPKESLSPTYNRDETTKKQHKLIEYFHLFSVQVNIAAESGDMGILSSH 88

Query: 106 VPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKG 164
           VP+I +LKPG++ +  +G  TKK+F++ GFA +  +S  +I AVE   +D      V+  
Sbjct: 89  VPSIEQLKPGLIEIIEEGGQTKKFFLAGGFAVMQPDSNLNINAVEGFALDAFSVDAVKSQ 148

Query: 165 LAEFNQKLSSAT-TDLEKAEAQIGVDVH 191
           LAE  Q+L+S T ++ E AEA+I V+V 
Sbjct: 149 LAE-AQRLASGTGSEKEIAEAKIQVEVR 175


>gi|190349051|gb|EDK41627.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 161

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           L ++  LP+ +  S  EV  V +P+  G +G+L  H+P + +L+PG+L  +  G +T++Y
Sbjct: 32  LKLSLALPHQTLYSESEVQQVNLPSINGDLGILANHIPIVEQLRPGLLEIISKGGETEQY 91

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS G A +   +   I A+EA   DQ D S V++ +A+  QK + ++ ++  AEA I +
Sbjct: 92  FVSGGIATVQPGNKLTISAIEAFKPDQFDASAVKQLIAD-AQKRAGSSDEVVVAEANIEL 150

Query: 189 DVHSALN 195
           +V  AL 
Sbjct: 151 EVLEALQ 157


>gi|327291976|ref|XP_003230696.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like, partial
           [Anolis carolinensis]
          Length = 121

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 3/118 (2%)

Query: 83  SAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHAN 140
           +A  V  V VP  +G  G+L  HVPT+  L+PGV++V   DG  TK YFVSSG   ++A+
Sbjct: 4   NAAHVKQVDVPTLSGAFGILAAHVPTLQVLRPGVVTVFAEDGASTK-YFVSSGSVTVNAD 62

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           S   ++A E   +DQ+D +  +  L +   ++++A+ +  KAEAQI V+ + AL  AL
Sbjct: 63  SSVQLLAEEVALLDQLDLAAAKSNLEKALSEMAAASDESAKAEAQIRVEANEALVKAL 120


>gi|157129671|ref|XP_001655448.1| ATP synthase delta chain, mitochondrial [Aedes aegypti]
 gi|108882049|gb|EAT46274.1| AAEL002504-PA [Aedes aegypti]
          Length = 173

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 74/112 (66%), Gaps = 1/112 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADI 145
           +  V VP+ +G  G+LP HVPT+A LKPGV++V++ +  TKK FVSSG   ++ +S   +
Sbjct: 60  IRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYEQDGATKKIFVSSGTITVNEDSSVQV 119

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSA 197
           +A EA P++ +D    ++ L+    +LSSA+TD E+AEA I V+V  AL  A
Sbjct: 120 LAEEAHPVEDLDSGACREILSSAQSQLSSASTDKERAEAGIAVEVAEALVKA 171


>gi|254292531|ref|YP_003058554.1| ATP synthase F1 subunit epsilon [Hirschia baltica ATCC 49814]
 gi|254041062|gb|ACT57857.1| ATP synthase F1, epsilon subunit [Hirschia baltica ATCC 49814]
          Length = 131

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL  + V P   EL + EVD V  P S GQ GVLPGH P +  LK GV+ V +G+  
Sbjct: 1   MSDKLHFSLVSP-ERELFSGEVDQVDAPGSEGQFGVLPGHAPFMTTLKAGVVEVFEGDAR 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
            + FV SGFA +    +  ++A EA+ +D  D S  +  LAE    L +A  D EK
Sbjct: 60  TRLFVRSGFADVTPQGLT-VLAEEAINLDGFDASASKTALAEAQDALIAAEDDHEK 114


>gi|157129669|ref|XP_001655447.1| ATP synthase delta chain, mitochondrial [Aedes aegypti]
 gi|403182488|gb|EJY57423.1| AAEL002504-PB [Aedes aegypti]
          Length = 161

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 73/109 (66%), Gaps = 1/109 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADI 145
           +  V VP+ +G  G+LP HVPT+A LKPGV++V++ +  TKK FVSSG   ++ +S   +
Sbjct: 48  IRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYEQDGATKKIFVSSGTITVNEDSSVQV 107

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           +A EA P++ +D    ++ L+    +LSSA+TD E+AEA I V+V  AL
Sbjct: 108 LAEEAHPVEDLDSGACREILSSAQSQLSSASTDKERAEAGIAVEVAEAL 156


>gi|50410163|ref|XP_456939.1| DEHA2A14014p [Debaryomyces hansenii CBS767]
 gi|49652603|emb|CAG84917.1| DEHA2A14014p [Debaryomyces hansenii CBS767]
          Length = 160

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 41/196 (20%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFRQ  R +AR SA    R ++++   + A                              
Sbjct: 1   MFRQTLRQVARQSATVVRRNYATEAATSDA------------------------------ 30

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-V 119
                    L ++  LP+ +  S  EV+ V +P+  G +G+L  H+P + +L+PG+L  +
Sbjct: 31  ---------LKLSLALPHQTLYSESEVEQVNLPSINGDLGILANHIPIVEQLRPGLLEII 81

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
             G +T++YFVS G A +   +   I A+EA   +Q D   V+  +A+  QK +S++ ++
Sbjct: 82  SKGGETEQYFVSGGIATVQPGNKLTISAIEAFKPEQFDAQAVKSLIAD-AQKRASSSDEV 140

Query: 180 EKAEAQIGVDVHSALN 195
             AEA I ++V  AL 
Sbjct: 141 VVAEANIELEVLEALQ 156


>gi|154246025|ref|YP_001416983.1| F0F1 ATP synthase subunit epsilon [Xanthobacter autotrophicus Py2]
 gi|154160110|gb|ABS67326.1| ATP synthase F1, epsilon subunit [Xanthobacter autotrophicus Py2]
          Length = 139

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 5/118 (4%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V  VIVP + G+ GV+ GH P I  LKPG+L++     ++ YFV  GFA ++   +  I+
Sbjct: 20  VTEVIVPGAEGEFGVMAGHAPFIGMLKPGILTIKGDGASRSYFVRGGFAEVNPAGLT-IL 78

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD--LEKAEAQIG--VDVHSALNSALTG 200
           A EA P+D++D   +Q+ + +  + ++ ATTD   ++A  Q+     V++AL S  TG
Sbjct: 79  AEEAKPLDELDLGALQQQIQDAKEDVADATTDESRQRAARQLADLEQVYTALESGRTG 136


>gi|241959642|ref|XP_002422540.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223645885|emb|CAX40548.1| ATP synthase delta chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 161

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 2/126 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKY 128
           L ++  LP+ +  +  EV  V +P+  G +G+L  H+P + +L+PG+L +   N D+ +Y
Sbjct: 32  LKLSLALPHQTLYNDSEVQQVNLPSVNGDLGILANHIPIVEQLRPGLLEIISKNGDSDQY 91

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS G A +   +   I A+EA   DQID S V+  +A+  QK + ++ +   AEA I +
Sbjct: 92  FVSGGIAMVQPGNKLTISAIEAFKTDQIDISAVKNLIAD-AQKRAESSDEKVAAEANIEL 150

Query: 189 DVHSAL 194
           +V  AL
Sbjct: 151 EVLEAL 156


>gi|68473261|ref|XP_719436.1| hypothetical protein CaO19.7678 [Candida albicans SC5314]
 gi|46441253|gb|EAL00552.1| hypothetical protein CaO19.7678 [Candida albicans SC5314]
 gi|238880446|gb|EEQ44084.1| ATP synthase delta chain, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 161

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 2/126 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKY 128
           L ++  LP+ +  +  EV  V +P+  G +G+L  H+P + +L+PG+L +   N D+ +Y
Sbjct: 32  LKLSLALPHQTLYNDSEVQQVNLPSVNGDLGILANHIPIVEQLRPGLLEIISKNGDSDQY 91

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS G A +   +   I A+EA   DQID S V+  +A+  QK + ++ +   AEA I +
Sbjct: 92  FVSGGIAMVQPGNKLTISAIEAFKTDQIDLSAVKNLIAD-AQKRAESSDEKVAAEANIEL 150

Query: 189 DVHSAL 194
           +V  AL
Sbjct: 151 EVLDAL 156


>gi|374292978|ref|YP_005040013.1| ATP synthase, F1 sector subunit epsilon epsilon [Azospirillum
           lipoferum 4B]
 gi|357424917|emb|CBS87797.1| ATP synthase, F1 sector, epsilon subunit epsilon [Azospirillum
           lipoferum 4B]
          Length = 138

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHAN 140
           L ++ VDMV+VP S G  GVL GH P I+ ++PGV+ V++G+    + FV+ GFA +   
Sbjct: 16  LKSQPVDMVVVPGSEGDFGVLAGHSPMISTVRPGVIDVYEGDRVVDRVFVAGGFAEV-TE 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           +   ++A EAV +  +D + V+K + + ++ L  + +D E+A A+  + V  A   AL+
Sbjct: 75  ARCTVLAEEAVALTDLDRAAVEKQIKDLSEDLDDSKSDAERAVAETKLAVARAKLDALS 133


>gi|144898924|emb|CAM75788.1| ATP synthase F1, epsilon subunit [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 133

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 3/134 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGND 124
           +  K+    V P A  L ++ VDMV+VP S G  G L  H P I  ++PGV++VH DG  
Sbjct: 1   MAEKIKFELVSP-AKLLISESVDMVVVPGSEGDFGALALHAPMITTVRPGVINVHNDGKI 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
             + FV+ GFA ++   V  ++A EA+P+  I   +    L +  + ++ A TD EKA A
Sbjct: 60  GNRIFVAGGFAEVNEERVT-VLAEEAIPVADITADMASARLQDAREAIADAKTDAEKAAA 118

Query: 185 QIGVDVHSALNSAL 198
              + + +AL +A+
Sbjct: 119 DQRMLIATALQAAI 132


>gi|395831297|ref|XP_003788739.1| PREDICTED: ATP synthase subunit delta, mitochondrial [Otolemur
           garnettii]
          Length = 168

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 3/133 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
            +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T
Sbjct: 36  GQMSFIFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVIVHAEDGT-T 94

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE  
Sbjct: 95  SKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQTELSGAADEATRAEIL 154

Query: 186 IGVDVHSALNSAL 198
           I ++ + AL  AL
Sbjct: 155 IRIEANEALVKAL 167


>gi|254566933|ref|XP_002490577.1| Delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Komagataella pastoris GS115]
 gi|238030373|emb|CAY68296.1| Delta subunit of the central stalk of mitochondrial F1F0 ATP
           synthase [Komagataella pastoris GS115]
 gi|328350964|emb|CCA37364.1| F-type H+-transporting ATPase subunit delta [Komagataella pastoris
           CBS 7435]
          Length = 161

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKY 128
           L V+  LP+ + +  KE   V +P ++G++GVL  HVP + ELKPGV+ V D    + KY
Sbjct: 31  LKVSLALPHETIIDNKEAAQVNLPGASGELGVLANHVPIVEELKPGVVEVLDSAGKSDKY 90

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           F+S G A I  NS   I  +EA  +D      + + LAE  + +SS
Sbjct: 91  FISGGVASIQPNSKLSISTIEAFTLDSFSAEEINRLLAESQKNVSS 136


>gi|406602817|emb|CCH45593.1| hypothetical protein BN7_5176 [Wickerhamomyces ciferrii]
          Length = 160

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 2/145 (1%)

Query: 53  SVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAEL 112
           S +++ R     +    L ++  LP+A+  S+++V  V VP + G  G+L  HVP I +L
Sbjct: 14  SQFISRRTYADAASADVLKLSLALPHATLFSSEQVTQVNVPGANGDFGILANHVPIIEQL 73

Query: 113 KPGVLSVHD-GNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQK 171
           +PG++S+ +    TK++FVS GFA +   S   I A+EA          V+  LAE  + 
Sbjct: 74  RPGLISITETSGQTKEFFVSGGFATVQPGSTLSITAIEAFEPSAFSAEAVKTQLAEAQKN 133

Query: 172 LSSATTDLEKAEAQIGVDVHSALNS 196
           ++++   +  A A I V+V  AL S
Sbjct: 134 VNNSDEAI-AATAAIQVEVLEALQS 157


>gi|412990852|emb|CCO18224.1| predicted protein [Bathycoccus prasinos]
          Length = 181

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 12/98 (12%)

Query: 35  FVESWKKVNPNM-EPPKTPSVYMTPRPQTPTSI----------PSKLTVNFVLPYASELS 83
           F E + K  P+M +PP TPS YM P      S           P  + +NF LP+ +  +
Sbjct: 70  FQELFDKYRPSMMDPPGTPSTYM-PAEDVAKSGEEEVKNAGPPPETVKLNFRLPHEAVFA 128

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD 121
             EV+MV+VPA TG  G+LPGHVP +A+L+PGV+SV +
Sbjct: 129 DAEVNMVLVPAETGDFGILPGHVPVVAKLRPGVVSVEN 166


>gi|288959332|ref|YP_003449673.1| F-type H+-transporting ATPase subunit epsilon [Azospirillum sp.
           B510]
 gi|288911640|dbj|BAI73129.1| F-type H+-transporting ATPase epsilon chain [Azospirillum sp. B510]
          Length = 138

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHAN 140
           L ++ VDMV+VP S G  GVL GH P I+ ++PGV+ V++G+    + FV+ GFA +   
Sbjct: 16  LKSQPVDMVVVPGSEGDFGVLAGHSPMISTVRPGVIDVYEGDRVVDRVFVAGGFAEV-TE 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           +   ++A EAV +  +D + V+K + + ++ L  + +D E+A A+  + V  A   AL+
Sbjct: 75  ARCTVLAEEAVALTDLDRAAVEKQVKDLSEDLDDSKSDAERAAAESKLAVARAKLDALS 133


>gi|308502812|ref|XP_003113590.1| hypothetical protein CRE_26546 [Caenorhabditis remanei]
 gi|308263549|gb|EFP07502.1| hypothetical protein CRE_26546 [Caenorhabditis remanei]
          Length = 165

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT- 125
           P +L + F  P  +  S   V  V VP   G +GVL  HVPTI  LKPGV++V     T 
Sbjct: 30  PEELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVAVTTNEGTV 89

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++ FVSSG   ++ +    ++A E + I+ ID S  +  L E  QK S   +++ +AEAQ
Sbjct: 90  QRLFVSSGTLSVNIDGSCQVLAEEVLKIEDIDESAARAEL-ESAQKASGEGSEVARAEAQ 148

Query: 186 IGVDVHSALNSALT 199
           I  +V  AL  A T
Sbjct: 149 IRAEVAEALIKAAT 162


>gi|407783444|ref|ZP_11130644.1| F-type H+-transporting ATPase subunit epsilon [Oceanibaculum
           indicum P24]
 gi|407201569|gb|EKE71567.1| F-type H+-transporting ATPase subunit epsilon [Oceanibaculum
           indicum P24]
          Length = 136

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 71  TVNFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KY 128
           T NF L    +L   + V+MV+VP + G  GVLP H P I+ L PGV+ +++G   K + 
Sbjct: 4   TTNFELVSPEKLLVSQPVEMVVVPGAEGYFGVLPRHAPFISTLIPGVIQIYEGGQVKERI 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FV+ GFA +  +    ++A  A+P+ +ID + V++ L    + L  A +D EKA  Q  +
Sbjct: 64  FVAGGFAEVTEDRCT-VLAEVAMPMGEIDRAAVEQTLKNLAEDLQEAKSDAEKAAVQDKI 122

Query: 189 DVHSALNSAL 198
            V  A   AL
Sbjct: 123 AVEQAKLRAL 132


>gi|197260762|gb|ACH56881.1| mitochondrial F1F0-ATP synthase subunit delta/ATP16 [Simulium
           vittatum]
          Length = 157

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 81/126 (64%), Gaps = 3/126 (2%)

Query: 72  VNFVLPYASEL--SAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKY 128
           ++F L  A+++   ++ V  V VP+ +G  G+LP HVPTIA LKPGV++V + + T K+ 
Sbjct: 27  MSFTLAAANKVFYDSQSVRQVDVPSMSGAFGILPKHVPTIAALKPGVVNVIENDGTSKEI 86

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVSSG   ++ ++   ++A EA P++ +D +  ++  A    + +SA+TD+ KAEA I +
Sbjct: 87  FVSSGTITVNEDASVQVLAEEAHPVESLDAAACREIFASAQSQAASASTDVAKAEAAIAL 146

Query: 189 DVHSAL 194
           +V  AL
Sbjct: 147 EVAEAL 152


>gi|342181705|emb|CCC91185.1| putative ATP synthase, epsilon chain [Trypanosoma congolense
           IL3000]
          Length = 182

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KK 127
           T+   L    E   +E  V  + V  + G  G+ PGH   I +L P  L+V   + T KK
Sbjct: 49  TLRLTLTRQDEFLMREEAVKCITVTGANGDYGIYPGHAYKIVQLTPAPLTVEYADGTIKK 108

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +FVS GFA I+     D+  VE +P+D +DP++ ++ L+     L SA  D  K+  +I 
Sbjct: 109 FFVSGGFAHINNEGSCDVNTVECIPLDDLDPAMAERELSAQQAALGSAKDDKAKSVVEIR 168

Query: 188 VDVHSALNSAL 198
           V V  A+ +AL
Sbjct: 169 VTVLEAVIAAL 179


>gi|363753304|ref|XP_003646868.1| hypothetical protein Ecym_5289 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356890504|gb|AET40051.1| hypothetical protein Ecym_5289 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 159

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 1/129 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L ++F LP+ +  +  +V  V +P  +G +G+L  HVP + +L PGV+ V +   +KK+F
Sbjct: 31  LKLHFALPHNTIYAGSKVTQVNLPVKSGHVGILANHVPIVEQLVPGVVEVVEEGASKKFF 90

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GFA +  +S   I +VEA P++      ++  L E  +   SA   +  AEA I ++
Sbjct: 91  VSGGFATVQPDSTMSITSVEAFPLESFSSESIKSLLVEAEKNAGSADQKI-AAEAAIQIE 149

Query: 190 VHSALNSAL 198
           V  AL +AL
Sbjct: 150 VLEALQAAL 158


>gi|392381408|ref|YP_005030605.1| ATP synthase, F1 sector, epsilon subunit epsilon [Azospirillum
           brasilense Sp245]
 gi|356876373|emb|CCC97138.1| ATP synthase, F1 sector, epsilon subunit epsilon [Azospirillum
           brasilense Sp245]
          Length = 137

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 4/110 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHAN 140
           L+++ VDMV+VP S G  GVL GH P I+ ++PGV+ V++ +    + FV+ GFA +   
Sbjct: 16  LTSQPVDMVVVPGSEGDFGVLAGHSPMISTVRPGVIDVYEADRVVDRVFVAGGFAEVTET 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA--EAQIGV 188
               ++A EA+ + +ID + V++ + +  + L  A +D EKA  EA+I +
Sbjct: 76  RCT-VLAEEAIAVAEIDRAKVEQQIRDLGEDLEDAKSDDEKARVEAKIAI 124


>gi|340749563|ref|ZP_08686416.1| ATP synthase F1, epsilon subunit [Fusobacterium mortiferum ATCC
           9817]
 gi|229421393|gb|EEO36440.1| ATP synthase F1, epsilon subunit [Fusobacterium mortiferum ATCC
           9817]
          Length = 134

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+ Y  ++  +E + V+V  + G MG+LP H P IA L  G + +      +KYFVS G 
Sbjct: 8   VVTYEEKVLEQEAEFVLVRTTEGDMGILPNHSPFIAGLSTGEMKIRLNGKEEKYFVSEGL 67

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
             I +N+V  IIA EA+P DQ+D    +K + E   KL+    D
Sbjct: 68  LEI-SNNVVTIIATEAIPADQLDVERAKKEVEELKAKLAKMQED 110


>gi|146411981|ref|XP_001481962.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 161

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           L ++  LP+ +  S  EV  V +P+  G +G+L  H+P + +L+PG+L  +  G +T++Y
Sbjct: 32  LKLSLALPHQTLYSESEVQQVNLPSINGDLGILANHIPIVEQLRPGLLEIISKGGETEQY 91

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS G A +   +   I A+EA   DQ D   V++ +A+  QK + ++ ++  AEA I +
Sbjct: 92  FVSGGIATVQPGNKLTISAIEAFKPDQFDALAVKQLIAD-AQKRAGSSDEVVVAEANIEL 150

Query: 189 DVHSALNS 196
           +V  AL  
Sbjct: 151 EVLEALQG 158


>gi|297493582|gb|ADI40513.1| mitochondrial H+-transporting ATP synthase F1 complex delta subunit
           [Cynopterus sphinx]
 gi|297493584|gb|ADI40514.1| mitochondrial H+-transporting ATP synthase F1 complex delta subunit
           [Rousettus leschenaultii]
          Length = 117

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 74  FVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVS 131
           F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVS
Sbjct: 4   FASPTQVFFNGANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVS 62

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           SG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI
Sbjct: 63  SGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELSGAADEAARAEIQI 117


>gi|260943874|ref|XP_002616235.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849884|gb|EEQ39348.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 160

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 2/135 (1%)

Query: 62  TPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VH 120
           T  S    L ++  LP+ +  S  EV  V +P+  G +G+L  H+P + +L+PG+L  + 
Sbjct: 23  TEASGSDALKLSLALPHQTLYSESEVQQVNLPSVNGDLGILANHIPIVEQLRPGLLEIIS 82

Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
            G +T++YFVS G A +   +   I A+EA   +Q D   ++  +A+  QK +S++ ++ 
Sbjct: 83  KGGETEQYFVSGGIATVQPGNKLTISAIEAFKPEQFDAQEIKSLIAD-AQKRASSSDEVV 141

Query: 181 KAEAQIGVDVHSALN 195
            AEA I ++V  AL 
Sbjct: 142 VAEANIELEVLEALQ 156


>gi|344303435|gb|EGW33684.1| ATP synthase delta subunit [Spathaspora passalidarum NRRL Y-27907]
          Length = 159

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 42/196 (21%)

Query: 1   MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
           MFRQA R +A+ S V R R ++++  A+ A                              
Sbjct: 1   MFRQALRQVAKQSTVVR-RTYATEAVASDA------------------------------ 29

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-V 119
                    L ++  LP+ +  S  EV+ V +P+  G +G+L  H+P + +L+PG+L  +
Sbjct: 30  ---------LKLSLALPHQTLYSDSEVEQVNLPSVNGDLGILANHIPIVEQLRPGLLEII 80

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
               +T++YFVS G A +   +   I A+EA   +QID   V+  +A+  QK + ++ ++
Sbjct: 81  SKTGETEQYFVSGGIATVQPGNKLTISAIEAFKPEQIDTHAVKNLIAD-AQKRAESSDEV 139

Query: 180 EKAEAQIGVDVHSALN 195
             AEA I ++V  AL+
Sbjct: 140 VAAEATIELEVLEALS 155


>gi|448082781|ref|XP_004195220.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
 gi|359376642|emb|CCE87224.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
          Length = 160

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 2/127 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           L ++  LP+ +  +  EV+ V VP+  G +G+L  H+P + +L+PG+L  +  G  T++Y
Sbjct: 31  LKLSLALPHQTLYTENEVEQVNVPSINGDLGILANHIPIVEQLRPGLLEIISKGGQTEQY 90

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS G A +   +   I A+EA   +Q D   V+  +A+  QK ++++ ++  AEA I +
Sbjct: 91  FVSGGIAAVQPGNKLTISAIEAFKPEQFDLEAVKSLIAD-AQKRAASSDEVVAAEANIEL 149

Query: 189 DVHSALN 195
           +V  AL 
Sbjct: 150 EVLEALQ 156


>gi|397485343|ref|XP_003813810.1| PREDICTED: uncharacterized protein LOC100994478 [Pan paniscus]
          Length = 324

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
            +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A
Sbjct: 206 FNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSIAVNA 264

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           +S   ++A EAV +D +D    +  L +   +L     +  +AE QI ++ + AL  AL
Sbjct: 265 DSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEALVKAL 323


>gi|449273020|gb|EMC82649.1| ATP synthase subunit delta, mitochondrial, partial [Columba livia]
          Length = 126

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 6/116 (5%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSV 142
           K+VD   VP  TG  G+L  HVPT+  LKPGV++V+  DG  TK YFVSSG   +HA+S 
Sbjct: 14  KQVD---VPTLTGSFGILASHVPTLQVLKPGVVTVYAEDGTATK-YFVSSGSVTVHADST 69

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
             ++A EAV +D +D +  +  L +   ++++A+ +  KAEAQI V+ + AL  AL
Sbjct: 70  VQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAAKAEAQIKVEANEALVKAL 125


>gi|448087374|ref|XP_004196312.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
 gi|359377734|emb|CCE86117.1| Piso0_005767 [Millerozyma farinosa CBS 7064]
          Length = 160

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 2/126 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKY 128
           L ++  LP+ +  +  EV+ V VP+  G +G+L  H+P + +L+PG+L  +  G  T++Y
Sbjct: 31  LKLSLALPHQTLYTENEVEQVNVPSINGDLGILANHIPIVEQLRPGLLEIISKGGQTEQY 90

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FVS G A +   +   I A+EA   +Q D   V+  +A+  QK ++++ ++  AEA I +
Sbjct: 91  FVSGGIAAVQPGNKLTISAIEAFKPEQFDLEAVKSLIAD-AQKRAASSDEVVAAEANIEL 149

Query: 189 DVHSAL 194
           +V  AL
Sbjct: 150 EVLEAL 155


>gi|322702172|gb|EFY93920.1| ATP synthase delta chain precursor [Metarhizium acridum CQMa 102]
          Length = 155

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 76  LPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKYFVSSGF 134
           +P  S   +++V  V +PA +G+MGVL  HVP+I +LKPG++  V +   +K++F++ GF
Sbjct: 31  VPDKSIYRSQDVVQVNIPAESGEMGVLANHVPSIEQLKPGIVEVVEESAGSKQFFLAGGF 90

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           A +  +S   I ++E  P++      ++ G+AE  +    + ++ + AEA+I ++V   L
Sbjct: 91  ATVQPDSTMSINSIEGYPLEDFSAEAIRAGIAEAQKVAGGSGSEQDIAEAKIELEVLETL 150


>gi|268531582|ref|XP_002630918.1| Hypothetical protein CBG02643 [Caenorhabditis briggsae]
          Length = 164

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT- 125
           P +L + F  P  +  S   V  V VP   G +GVL  HVPTI  LKPGV++V     T 
Sbjct: 29  PDELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVTVTTNEGTV 88

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++ FVSSG   ++ +    ++A E + +++ID S  +  L +  Q+ S   +++ +AEAQ
Sbjct: 89  QRLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAEL-DAAQRASGEGSEVARAEAQ 147

Query: 186 IGVDVHSALNSALT 199
           I  +V  AL  A T
Sbjct: 148 IRAEVAEALIKAAT 161


>gi|71664003|ref|XP_818987.1| ATP synthase, epsilon chain [Trypanosoma cruzi strain CL Brener]
 gi|70884268|gb|EAN97136.1| ATP synthase, epsilon chain, putative [Trypanosoma cruzi]
          Length = 183

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 5/132 (3%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           T+ F L    E   +E  V  V V    G+ G+ PGH   I +L P  L+V   DG  TK
Sbjct: 49  TLRFTLTRQDEFLMRENPVKCVTVTGVNGEYGIYPGHAYKIVQLVPAPLTVEFTDGT-TK 107

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVS GFA I+     D+ AVE V ++ +D S  +K LA     L SA  +  KA  +I
Sbjct: 108 KYFVSGGFAHINNEGSCDVNAVECVAMEDLDLSAAEKALAAQQASLGSAKDEKAKAVIEI 167

Query: 187 GVDVHSALNSAL 198
            + V  ++ +AL
Sbjct: 168 RISVLESVIAAL 179


>gi|294874920|ref|XP_002767153.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239868602|gb|EEQ99870.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 160

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 56  MTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
           + P   TP  I ++L +    P  +    K +D V VP + G   +   H   I++L PG
Sbjct: 13  LLPSANTPAGITNRLLLTMGSPRENIFYLKPIDSVTVPGTEGTFTITNNHSLVISQLSPG 72

Query: 116 VLSVHDGNDTKKYFVSSGFAFIH------ANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           V++V DG D K +F+S GF F +          A+I  VE VP + +D     + L+E  
Sbjct: 73  VITVRDGTDLKDFFISDGFVFFNQPSDGTGCCRAEISGVELVPKEALDKDRAAQLLSEVQ 132

Query: 170 QKLSSATTDLEKAEAQIGVDV 190
              ++  T+ +K +AQ+G ++
Sbjct: 133 S--AAKETEWDKVKAQLGTNL 151


>gi|297493580|gb|ADI40512.1| mitochondrial H+-transporting ATP synthase F1 complex delta subunit
           [Miniopterus schreibersii]
          Length = 116

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 3/114 (2%)

Query: 74  FVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVS 131
           F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVS
Sbjct: 4   FASPTQVFFNGANVRQVDVPTQTGAFGILASHVPTLQVLRPGLVVVHAEDGT-TSKYFVS 62

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           SG   ++A+S   ++A EAV +D +D    +  L + + +LS A  +  +AE Q
Sbjct: 63  SGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAHSELSGAADEAARAEIQ 116


>gi|156841501|ref|XP_001644123.1| hypothetical protein Kpol_1053p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114759|gb|EDO16265.1| hypothetical protein Kpol_1053p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 109

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 93  PASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT---KKYFVSSGFAFIHANSVADIIAVE 149
           P  +G +GVL  HVP + +L PGV+ + + + +   KK+FVS GFA +  +S   I + E
Sbjct: 1   PVKSGHIGVLANHVPIVEQLTPGVIEIFEESVSSAPKKFFVSGGFASVQPDSTLSITSAE 60

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           A P+D      ++  LAE N+  SS  T +  AEA I ++V  AL +AL
Sbjct: 61  AFPLDSFSSENIRNLLAEANKNKSSTDTKV-AAEADIQIEVLEALQAAL 108


>gi|72390643|ref|XP_845616.1| ATP synthase, epsilon chain [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62359855|gb|AAX80283.1| ATP synthase, epsilon chain, putative [Trypanosoma brucei]
 gi|70802151|gb|AAZ12057.1| ATP synthase, epsilon chain, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261329023|emb|CBH12001.1| ATP synthase, epsilon chain, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 182

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 5/132 (3%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           T+   L    E   +E  V  V V  + G+ G+ PGH   I +L P  L+V   DG  TK
Sbjct: 49  TLRLTLTRQDEFLLREEPVKCVTVTGTNGEYGIYPGHAYKIVQLNPSPLTVEYTDGT-TK 107

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           KYFVS GFA I+     D+  VE   +D +D ++ +K LA     L SA  D  K+  +I
Sbjct: 108 KYFVSGGFAHINNEGSCDVNTVECTLLDDLDLAIAEKELAAQQAALGSAKDDKAKSVVEI 167

Query: 187 GVDVHSALNSAL 198
            + V  A+ +AL
Sbjct: 168 RISVIEAVIAAL 179


>gi|195393686|ref|XP_002055484.1| GJ19398 [Drosophila virilis]
 gi|194149994|gb|EDW65685.1| GJ19398 [Drosophila virilis]
          Length = 157

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     S    + + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ 
Sbjct: 16  RLSQKRSYSDDMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQ 75

Query: 119 VHDGNDTK--KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           V D ND K  KYFVSSG   ++ +S   ++A EA  I+ ID S  ++ L+++   LSSA 
Sbjct: 76  VTD-NDGKLTKYFVSSGSVTVNEDSSVQVLAEEAHNIEDIDVSEARQLLSKYQSALSSAG 134

Query: 177 TDLEK 181
           +D  K
Sbjct: 135 SDKAK 139


>gi|195481855|ref|XP_002101808.1| GE17838 [Drosophila yakuba]
 gi|194189332|gb|EDX02916.1| GE17838 [Drosophila yakuba]
          Length = 157

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 3/127 (2%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     S   ++ + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ 
Sbjct: 16  RLAQSRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQ 75

Query: 119 V--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           V  +DG  T K+FVSSG   ++ +S   ++A EA  I+ ID +  ++ LA++  +LSSA 
Sbjct: 76  VVENDGK-TLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAG 134

Query: 177 TDLEKAE 183
            D  KA+
Sbjct: 135 DDKAKAQ 141


>gi|56462140|gb|AAV91353.1| ATP synthase 1 [Lonomia obliqua]
          Length = 161

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 3/97 (3%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVAD 144
           V  + VP+ +G  G+LP HVPT+A L+PGV++V  +DG  +K  FVSSG   ++ +S   
Sbjct: 47  VKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTVIENDGKQSK-IFVSSGTVTVNDDSSVQ 105

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
           ++A EA P++ +D S  Q+ L++   +LSSA+ D  K
Sbjct: 106 VLAEEAHPLESLDRSAAQEALSKAQSELSSASNDKAK 142


>gi|407773677|ref|ZP_11120977.1| ATP synthase subunit epsilon [Thalassospira profundimaris WP0211]
 gi|407283123|gb|EKF08664.1| ATP synthase subunit epsilon [Thalassospira profundimaris WP0211]
          Length = 134

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHAN 140
           L ++ V+MV+VP + G  GVLP H P I+ ++PGV+ ++ G   +++ FV+ G A ++  
Sbjct: 16  LKSEPVEMVVVPGTDGNFGVLPKHAPMISTIRPGVIDIYAGGKVSERIFVAGGVAEVNPE 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
               I+A EAVP+  +     Q  L E    L SA T  +KA A+  +D+  A   AL+
Sbjct: 76  RCT-ILAEEAVPVSDLKADEAQARLEEAQAALKSAETAHDKANAERALDIARAQIQALS 133


>gi|18858089|ref|NP_572610.1| lethal (1) G0230, isoform A [Drosophila melanogaster]
 gi|442615755|ref|NP_001259397.1| lethal (1) G0230, isoform B [Drosophila melanogaster]
 gi|7291126|gb|AAF46561.1| lethal (1) G0230, isoform A [Drosophila melanogaster]
 gi|17945546|gb|AAL48825.1| RE24457p [Drosophila melanogaster]
 gi|220948188|gb|ACL86637.1| l(1)G0230-PA [synthetic construct]
 gi|220957490|gb|ACL91288.1| l(1)G0230-PA [synthetic construct]
 gi|440216604|gb|AGB95240.1| lethal (1) G0230, isoform B [Drosophila melanogaster]
          Length = 157

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 3/127 (2%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     S   ++ + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ 
Sbjct: 16  RLAQNRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQ 75

Query: 119 V--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           V  +DG  T K+FVSSG   ++ +S   ++A EA  I+ ID +  ++ LA++  +LSSA 
Sbjct: 76  VVENDGK-TLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAG 134

Query: 177 TDLEKAE 183
            D  KA+
Sbjct: 135 DDKAKAQ 141


>gi|363745992|ref|XP_001234760.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like, partial
           [Gallus gallus]
          Length = 123

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 75/118 (63%), Gaps = 6/118 (5%)

Query: 83  SAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHAN 140
           + K+VD   VP  TG  G+L  HVPT+  LKPGV++V+  DG  TK YFVSSG   ++A+
Sbjct: 9   TVKQVD---VPTLTGSFGILASHVPTLQVLKPGVVTVYAEDGTATK-YFVSSGSVTVNAD 64

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           S   ++A EAV +D +D +  +  L +   ++++A+ +  +AEAQI V+ + AL  AL
Sbjct: 65  STVQVLAEEAVTMDMLDLATAKSNLEKAVSEMAAASDEAARAEAQIKVEANEALVKAL 122


>gi|194890203|ref|XP_001977262.1| GG18349 [Drosophila erecta]
 gi|190648911|gb|EDV46189.1| GG18349 [Drosophila erecta]
          Length = 157

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 3/127 (2%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     S   ++ + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ 
Sbjct: 16  RLAQNRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQ 75

Query: 119 V--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           V  +DG  T K+FVSSG   ++ +S   ++A EA  I+ ID +  ++ LA++  +LSSA 
Sbjct: 76  VVENDGK-TLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANDARQLLAKYQSQLSSAG 134

Query: 177 TDLEKAE 183
            D  KA+
Sbjct: 135 DDKAKAQ 141


>gi|17534525|ref|NP_495286.1| Protein F58F12.1 [Caenorhabditis elegans]
 gi|1168585|sp|Q09544.1|ATPD_CAEEL RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|351063833|emb|CCD72069.1| Protein F58F12.1 [Caenorhabditis elegans]
          Length = 163

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KK 127
           +L + F  P  +  S   V  V VP   G +GVL  HVPTI  LKPGV+SV     T ++
Sbjct: 30  ELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEGTVQR 89

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
            FVSSG   ++ +    ++A E + +++ID S  +  L +  Q+ S   +++ +AEAQI 
Sbjct: 90  LFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAEL-DAAQRASGEGSEVARAEAQIR 148

Query: 188 VDVHSALNSALT 199
            +V  AL  A T
Sbjct: 149 AEVAEALIKAAT 160


>gi|288856335|ref|NP_001165818.1| ATP synthase subunit delta, mitochondrial [Nasonia vitripennis]
 gi|288856337|ref|NP_001165819.1| ATP synthase subunit delta, mitochondrial [Nasonia vitripennis]
          Length = 161

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 4/76 (5%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVSSGFAFIHANSVA 143
           K+VD   VP+ +G  G+LP HVPT+A LKPGV++V++ G D+K+ FVSSG   I+ +S  
Sbjct: 49  KQVD---VPSFSGSFGILPKHVPTLAVLKPGVVTVYEQGGDSKRIFVSSGTVTINEDSSV 105

Query: 144 DIIAVEAVPIDQIDPS 159
            ++A EA P+D +D S
Sbjct: 106 QVLAEEAHPVDSLDSS 121


>gi|294948150|ref|XP_002785641.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239899620|gb|EER17437.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 160

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 56  MTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
           + P   TP  I ++L +    P  +    K +D V VP + G   +   H   I++L PG
Sbjct: 13  LLPSANTPAGITNRLLLTMGSPRENIFYLKPIDSVTVPGTEGTFTITNNHSLVISQLSPG 72

Query: 116 VLSVHDGNDTKKYFVSSGFAFIH------ANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           V++V DG + K +F+S GF F +          A+I  VE VP + +D     + L+E  
Sbjct: 73  VITVRDGTELKDFFISDGFVFFNQPSDGTGCCRAEISGVELVPKEALDKDRAAQLLSEVQ 132

Query: 170 QKLSSATTDLEKAEAQIGVDV 190
              ++  T+ +K +AQ+G ++
Sbjct: 133 S--AAKETEWDKVKAQLGTNL 151


>gi|384261870|ref|YP_005417056.1| ATP synthase subunit epsilon [Rhodospirillum photometricum DSM 122]
 gi|378402970|emb|CCG08086.1| ATP synthase epsilon chain [Rhodospirillum photometricum DSM 122]
          Length = 134

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADI 145
           V+M +VP + G  G +P H P ++ ++PGV+S+H+G   T++ F++ GFA + A     I
Sbjct: 21  VEMAVVPGTEGDFGAMPRHAPMLSTVRPGVISIHNGGKVTRRLFIAGGFAEVTAERCT-I 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALTG 200
           +A EA+ +  + P+ VQ+ L   +  +  A T+ EK  A+    +  AL  A  G
Sbjct: 80  LADEAIDLADLTPAAVQERLQAADDLVKEARTEDEKRAAERARFLAQALAEAARG 134


>gi|195350626|ref|XP_002041840.1| GM11414 [Drosophila sechellia]
 gi|194123645|gb|EDW45688.1| GM11414 [Drosophila sechellia]
          Length = 157

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     S   ++ + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ 
Sbjct: 16  RLAQNRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQ 75

Query: 119 V--HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           V  +DG  T K+FVSSG   ++ +S   ++A EA  I+ ID +  ++ LA++  +LSSA 
Sbjct: 76  VVENDGK-TLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAG 134

Query: 177 TDLEKAEAQ 185
              EKA+AQ
Sbjct: 135 D--EKAKAQ 141


>gi|389611367|dbj|BAM19295.1| ATP synthase delta chain, mitochondrial [Papilio polytes]
          Length = 161

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 72/108 (66%), Gaps = 6/108 (5%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSV 142
           K++D   VP+ +G  G+LP HVPT+A L+PGV++V  +DG  TK  FVSSG   ++ +S 
Sbjct: 48  KQID---VPSFSGSFGILPKHVPTLAVLRPGVVTVVENDGKQTK-IFVSSGTITVNDDSS 103

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDV 190
             ++A EA P++ +D S  Q+ L++   +L+SA  +  KAEAQI V+V
Sbjct: 104 VQVLAEEAHPLESLDRSAAQEALSKAQSELNSAANEKAKAEAQIAVEV 151


>gi|429240766|ref|NP_596259.2| F1-ATPase delta subunit (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|395398424|sp|Q9P6R6.2|ATPD_SCHPO RecName: Full=ATP synthase subunit delta, mitochondrial; AltName:
           Full=F-ATPase delta subunit; Flags: Precursor
 gi|347834354|emb|CAB89879.2| F1-ATPase delta subunit (predicted) [Schizosaccharomyces pombe]
          Length = 167

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 2/131 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-K 127
           KL ++  LPY +      V  V +PA  G+MG+L  HVP I  LKPGV+SV D +  K K
Sbjct: 37  KLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSK 96

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YF+S GFA    ++   I   EA  ++    S+  + L +   +++S+   +  AEA + 
Sbjct: 97  YFISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNSSDEGV-AAEAAVR 155

Query: 188 VDVHSALNSAL 198
           V V  +L  AL
Sbjct: 156 VSVLESLVRAL 166


>gi|195553820|ref|XP_002076765.1| GD24697 [Drosophila simulans]
 gi|194202755|gb|EDX16331.1| GD24697 [Drosophila simulans]
          Length = 168

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 5/123 (4%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDG 122
           S   ++ + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ V  +DG
Sbjct: 22  SYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQVVENDG 81

Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
             T K+FVSSG   ++ +S   ++A EA  I+ ID +  ++ LA++  +LSSA    EKA
Sbjct: 82  K-TLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAGD--EKA 138

Query: 183 EAQ 185
           +AQ
Sbjct: 139 KAQ 141


>gi|195134855|ref|XP_002011852.1| GI14351 [Drosophila mojavensis]
 gi|193909106|gb|EDW07973.1| GI14351 [Drosophila mojavensis]
          Length = 157

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     S    + + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ 
Sbjct: 16  RLGQNRSYSDDMKLTFAAANKTFFDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQ 75

Query: 119 VHDGNDTK--KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           V D N+ K  KYFVSSG   ++ +S   ++A EA  I+ ID S  ++ L+++  +LSSA 
Sbjct: 76  VTD-NEGKVTKYFVSSGSVTVNEDSSVQVLAEEAHNIEDIDVSEARQLLSKYQSELSSAG 134

Query: 177 TDLEK 181
            D  K
Sbjct: 135 NDKAK 139


>gi|108773321|ref|YP_635876.1| ATP synthase CF1 epsilon subunit [Oltmannsiellopsis viridis]
 gi|122232211|sp|Q20EW9.1|ATPE_OLTVI RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|82541903|gb|ABB81944.1| CF1 epsilon subunit of ATP synthase [Oltmannsiellopsis viridis]
          Length = 131

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEVD +I+P +TGQMGVL  H P I  L  GV+ V    D +   V  GFA +  N +  
Sbjct: 17  KEVDEIILPTNTGQMGVLSNHAPLITALDIGVMLVRTQKDWESVAVMGGFALVKQNQIT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           ++  EA   + IDP   ++  A   Q L  AT   EK EA
Sbjct: 76  VLVNEAESKETIDPQEAEEAFATAKQTLEQATGQKEKVEA 115


>gi|427427169|ref|ZP_18917214.1| ATP synthase epsilon chain [Caenispirillum salinarum AK4]
 gi|425883870|gb|EKV32545.1| ATP synthase epsilon chain [Caenispirillum salinarum AK4]
          Length = 133

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 3/130 (2%)

Query: 71  TVNFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKY 128
           T+ F L    +L   E V+MVIVP S G  G +P H P ++ ++PGVL ++ DG    + 
Sbjct: 4   TLEFELVSPEKLLVSEPVEMVIVPGSEGNFGAMPRHAPMLSTVRPGVLDIYKDGKVANQI 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           FV+ GFA +       ++A EAV +  +    V+K L         A TD+EKA+A   V
Sbjct: 64  FVAGGFAEVTEERCT-VLAEEAVVLSDLTRDDVEKRLQAARDAEQEADTDVEKAQAAKNV 122

Query: 189 DVHSALNSAL 198
            V  A+  A+
Sbjct: 123 AVAEAMRDAI 132


>gi|50551323|ref|XP_503135.1| YALI0D22022p [Yarrowia lipolytica]
 gi|49649003|emb|CAG81333.1| YALI0D22022p [Yarrowia lipolytica CLIB122]
          Length = 137

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKYFVSSGFAFIHANSVA 143
           KEV  V +P++ G++G+L  HVPTI +LKPGV+ V + N +TK YF+S GFA +  +S  
Sbjct: 23  KEVTQVNIPSTAGELGILANHVPTIQQLKPGVVEVIETNGETKSYFISGGFATVQPDSEL 82

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAE 167
            + ++EA   +   P  ++   AE
Sbjct: 83  SVNSIEAFQAEDFSPEAIKSLTAE 106


>gi|341892304|gb|EGT48239.1| hypothetical protein CAEBREN_32792 [Caenorhabditis brenneri]
          Length = 165

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KK 127
           +L + F  P  +  S   V  V VP   G +GVL  HVPTI  LKPGV+SV     + ++
Sbjct: 32  ELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTTEGSVQR 91

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
            FVSSG   ++ +    ++A E + ++ ID S  +  L E  Q+ S   +++ +AEAQI 
Sbjct: 92  LFVSSGTLSVNIDGSCQVLAEEVLKVEDIDESAARAEL-ESAQRASGEGSEVARAEAQIR 150

Query: 188 VDVHSALNSALT 199
            +V  AL  A T
Sbjct: 151 AEVAEALIKAAT 162


>gi|89628441|gb|ABD77506.1| putative mitochondrial ATP synthase [Theileria lestoquardi]
          Length = 148

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 11/91 (12%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGV--LSVHDGNDTKKYFVSSGFAFIHANS--- 141
           V  + VP   G   V PGH P ++ LKPGV   S+ D N+  KYF+SSGF F++  S   
Sbjct: 37  VKNLTVPGYDGYFTVTPGHSPMLSTLKPGVVSFSLKDSNEVHKYFISSGF-FVYRQSDDS 95

Query: 142 -VADIIAVEAVPIDQIDP----SLVQKGLAE 167
             AD++ VE VP+DQ+D     S++Q+ LAE
Sbjct: 96  HTADVMGVEIVPLDQLDKERATSVLQEVLAE 126


>gi|407768750|ref|ZP_11116128.1| F-type H+-transporting ATPase subunit epsilon [Thalassospira
           xiamenensis M-5 = DSM 17429]
 gi|407288434|gb|EKF13912.1| F-type H+-transporting ATPase subunit epsilon [Thalassospira
           xiamenensis M-5 = DSM 17429]
          Length = 134

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 2/119 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHAN 140
           L ++ V+MV+VP + G  GVLP H P I+ ++PGV+ ++ G   +++ FV+ G A ++  
Sbjct: 16  LKSEPVEMVVVPGTDGNFGVLPKHSPMISTIRPGVIDIYAGGKVSERIFVAGGVAEVNPE 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
               I+A EAVP+  I     Q  L      L +ATT  +KA A+  ++V  A  +AL+
Sbjct: 76  RCT-ILAEEAVPVSDIKADEAQARLETAQADLKAATTAHDKANAERALEVARAQIAALS 133


>gi|302662815|ref|XP_003023058.1| hypothetical protein TRV_02805 [Trichophyton verrucosum HKI 0517]
 gi|291187035|gb|EFE42440.1| hypothetical protein TRV_02805 [Trichophyton verrucosum HKI 0517]
          Length = 193

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 36/163 (22%)

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDG 122
           T++  KL ++ VLP  +   + +V  V + A +G MG+L  HVP+I +LKPG++  + +G
Sbjct: 29  TAVADKLKLSLVLPKETIYKSADVVQVNIAAESGDMGILSSHVPSIEQLKPGLIEIIEEG 88

Query: 123 NDTKKYF---------------------------------VSSGFAFIHANSVADIIAVE 149
             TKK+F                                 V+ GFA +  +S  +I AVE
Sbjct: 89  GQTKKFFRMLYPFHPTLAQFLQLNIKPAGVLASISSFFILVAGGFAVMQPDSNLNINAVE 148

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSAT-TDLEKAEAQIGVDVH 191
              +D      V+  LAE  Q+L+S T ++ E AEA+I V+V 
Sbjct: 149 GFSLDAFSVDAVKSQLAE-AQRLASGTGSEKEIAEAKIQVEVR 190


>gi|23006798|ref|ZP_00048955.1| COG0355: F0F1-type ATP synthase, epsilon subunit (mitochondrial
           delta subunit) [Magnetospirillum magnetotacticum MS-1]
          Length = 133

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 4/113 (3%)

Query: 73  NFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVS 131
           +FV P  + L + EV+ V +P + G+M VLPGH P +  LK GV++V +   + K+ +V 
Sbjct: 7   DFVGPERT-LYSGEVEAVQLPGAEGEMTVLPGHAPVLTTLKVGVITVTERAGNGKRIYVQ 65

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
            GFA I  N+V  ++A  A PI++I P+++ + +    Q L  AT DL + EA
Sbjct: 66  GGFADIGPNTVT-VLAERATPIEEITPAMIDEEI-RAAQMLHDATQDLARREA 116


>gi|167522944|ref|XP_001745809.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775610|gb|EDQ89233.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1128

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 46/71 (64%)

Query: 87   VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
            V  V VPA  G+ G+L  HVP +A LKPGV+SV DG  T  +FVSSG   ++A+S A ++
Sbjct: 1044 VQQVNVPALDGEFGILASHVPVVAALKPGVISVVDGGSTASFFVSSGVVTVNADSSAQVV 1103

Query: 147  AVEAVPIDQID 157
            A E   ++ +D
Sbjct: 1104 AEEVARLEDLD 1114


>gi|313227856|emb|CBY23005.1| unnamed protein product [Oikopleura dioica]
          Length = 144

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 78  YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFI 137
           Y ++++ K+VD   +P +TG +GVLP HVPT   L PGV++V   + + KYF+SSG   +
Sbjct: 36  YTADITIKQVD---IPTTTGTIGVLPEHVPTFGTLAPGVMTVMAESGSSKYFISSGSYTV 92

Query: 138 HANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           + +S   +IA EA P+   D    Q+ L   N
Sbjct: 93  NPDSSISVIAEEAGPLADFDKDAAQQALNAVN 124


>gi|395517753|ref|XP_003763038.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Sarcophilus harrisii]
          Length = 161

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 6/88 (6%)

Query: 78  YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFA 135
           Y +E + K+VD   VP  +G  G+L  HVPT+  LKPGV++VH  DG  T KYFVSSG  
Sbjct: 41  YFNEANVKQVD---VPTQSGAFGILAAHVPTLQVLKPGVVTVHAEDGT-TTKYFVSSGSV 96

Query: 136 FIHANSVADIIAVEAVPIDQIDPSLVQK 163
            ++A+S   ++A EAV +D +D +++ +
Sbjct: 97  TVNADSSVQLLAEEAVALDMLDLAVLGR 124


>gi|146094218|ref|XP_001467220.1| putative ATP synthase, epsilon chain [Leishmania infantum JPCM5]
 gi|398019826|ref|XP_003863077.1| ATP synthase, epsilon chain, putative [Leishmania donovani]
 gi|134071584|emb|CAM70273.1| putative ATP synthase, epsilon chain [Leishmania infantum JPCM5]
 gi|322501308|emb|CBZ36387.1| ATP synthase, epsilon chain, putative [Leishmania donovani]
          Length = 181

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           T+   +    E   KE  V  V +    G+ GV PGH   I +L P  L+V   DG   K
Sbjct: 48  TLRLTVTRQDEFLFKEAPVKCVTIVGVNGECGVYPGHAYEITQLTPAPLTVEMPDGT-VK 106

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA--EA 184
           KYF S GFA I+     DI  VE +P+ ++D    +K LA+    L+SA  D  +A  E 
Sbjct: 107 KYFTSGGFAHINNEGSCDINCVECIPLTELDVDAAEKALAQQQSALNSAHDDKARAVIEI 166

Query: 185 QIGV 188
           +IGV
Sbjct: 167 RIGV 170


>gi|347734820|ref|ZP_08867807.1| ATP synthase F1, epsilon subunit [Azospirillum amazonense Y2]
 gi|346922105|gb|EGY02599.1| ATP synthase F1, epsilon subunit [Azospirillum amazonense Y2]
          Length = 141

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 6/110 (5%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDT--KKYFVSSGFAFIH 138
           L ++ VDMV+VP + G +G LPGH P I  LKPGV+ ++ DG  T   + FV+ GFA + 
Sbjct: 16  LVSQPVDMVVVPGTEGYLGALPGHAPLITTLKPGVIDIYLDGITTISNRIFVAGGFAEV- 74

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK--AEAQI 186
             +   ++A EAV +  +D + V++ + +  + ++ A  D++K  AEA++
Sbjct: 75  TETRCTVLAEEAVEVAALDRAAVEQQVKDLAEDVADAANDVDKRAAEAKL 124


>gi|401426041|ref|XP_003877505.1| putative ATP synthase, epsilon chain [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322493750|emb|CBZ29040.1| putative ATP synthase, epsilon chain [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 181

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           T+   +    E   KE  V  V +    G+ GV PGH   I +L P  L+V   DG   K
Sbjct: 48  TLRLTVTRQDEFLFKEAPVKCVTIVGVNGECGVYPGHAYEITQLTPAPLTVEMPDGT-VK 106

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA--EA 184
           K+F S GFA I+     DI  VE +P+ ++D    +K LA+    L+SA  D  KA  E 
Sbjct: 107 KFFTSGGFAHINNEGSCDINCVECIPLTELDVDAAEKALAQQQSALTSAHDDKAKAVIEI 166

Query: 185 QIGV 188
           +IGV
Sbjct: 167 RIGV 170


>gi|381167517|ref|ZP_09876724.1| ATP synthase epsilon chain [Phaeospirillum molischianum DSM 120]
 gi|380683271|emb|CCG41536.1| ATP synthase epsilon chain [Phaeospirillum molischianum DSM 120]
          Length = 133

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 3/132 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTK 126
            K+    V P A  L ++ V+MV+VP   G  G LP H P I+ ++PGV+ +H +G  T 
Sbjct: 3   EKIQFELVSP-AKLLLSEPVEMVVVPGEDGDFGALPLHAPLISTVRPGVIDIHNNGKVTN 61

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           + F++ GFA +    V  ++A EA P++++   +  +  A  +  +S A TDL+++ A  
Sbjct: 62  RIFIAGGFAEVTGERVT-VLAEEAFPLEELTSEMAAERRAAADLAVSDAQTDLDRSRAAR 120

Query: 187 GVDVHSALNSAL 198
            V +  A+  AL
Sbjct: 121 QVAIAEAMVIAL 132


>gi|389608735|dbj|BAM17977.1| ATP synthase delta chain, mitochondrial [Papilio xuthus]
          Length = 161

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 3/117 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSV 142
           K V  + VP+ +G  G+LP HVPT+A L+PGV++V  +DG  TK  FVSSG   ++ +S 
Sbjct: 45  KVVKQIDVPSFSGSFGILPKHVPTLAVLRPGVVTVVENDGKQTK-IFVSSGTITVNDDSS 103

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
             ++A EA P++ +D S  Q+ L++   +L+SA  +  KAEA I V+V   +  A T
Sbjct: 104 VQVLAEEAHPLESLDRSAAQEALSKAQSELNSAANEKAKAEALIAVEVAEEVVKAAT 160


>gi|156088329|ref|XP_001611571.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain containing
           protein [Babesia bovis]
 gi|154798825|gb|EDO08003.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain containing
           protein [Babesia bovis]
          Length = 154

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 5/145 (3%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R  T T+   KL  + + P+ + ++        VP S G   V  GH   +  LKPGV+S
Sbjct: 10  RHATATTGHGKLLFSLLTPHTTLVNNIVAKQATVPGSEGYFTVTKGHAAMLTVLKPGVVS 69

Query: 119 V--HDGNDTKKYFVSSGF---AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
           V   +  +  KYF+SSGF   A +  NSVA++  VEAVP+D +D     + L E   +  
Sbjct: 70  VVAEETGEVSKYFLSSGFFKIAHVDGNSVAEVSGVEAVPLDHLDKERTTQVLQELLAEGH 129

Query: 174 SATTDLEKAEAQIGVDVHSALNSAL 198
            +     KA+  +G D+ +++  A+
Sbjct: 130 GSNDPWIKAKTMLGQDLCASILKAV 154


>gi|209965525|ref|YP_002298440.1| ATP synthase F1 subunit epsilon [Rhodospirillum centenum SW]
 gi|226740279|sp|B6IPC5.1|ATPE_RHOCS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|209958991|gb|ACI99627.1| ATP synthase F1, epsilon subunit [Rhodospirillum centenum SW]
          Length = 146

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%), Gaps = 8/122 (6%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL    V P    L ++ V MV+VP + G  GVLPGH P I  ++PG++ V+  N T
Sbjct: 1   MADKLEFELVSPEKL-LVSQPVAMVVVPGADGLFGVLPGHAPMIVTVRPGIIDVYGDNQT 59

Query: 126 ---KKYFVSSGFAFIHANSVADIIAVEAVPIDQI---DPSLVQKGLAEFNQKLSSATTDL 179
              ++ FV+ GFA +  ++   ++A EA  +D +   D + ++K +++  + +  AT+D+
Sbjct: 60  TVSRRIFVAGGFAEV-TDTRCTVLAEEASDLDALLKSDTAALEKQISDLREDIEDATSDV 118

Query: 180 EK 181
           E+
Sbjct: 119 ER 120


>gi|336111708|gb|AEI16514.1| mitochondrial ATP synthase subunit delta precursor [Chelon
           labrosus]
          Length = 96

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 105 HVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           HVPT+  L+PGV++V +D   + KYFVSSG   + A++   ++A EAVP+DQ+D +  + 
Sbjct: 1   HVPTLQVLRPGVVTVFNDDGSSVKYFVSSGSVTVXADASVQLLAEEAVPLDQLDAAAAKA 60

Query: 164 GLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            L +   +L++ + +  +AE QI ++ + A+  AL
Sbjct: 61  NLEQAQSELAATSDEAARAEVQISIEANEAIVKAL 95


>gi|322707343|gb|EFY98922.1| ATP synthase delta chain [Metarhizium anisopliae ARSEF 23]
          Length = 175

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 21/140 (15%)

Query: 76  LPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKYF----- 129
           +P  S   +++V  V +PA +G+MGVL  HVP+I +LKPG++  V +   +K++F     
Sbjct: 31  VPDKSIYRSQDVIQVNIPAESGEMGVLANHVPSIEQLKPGIVEVVEESAGSKQFFRMWRP 90

Query: 130 ---------------VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
                          ++ GFA +  NS   I A+E  P++      V+ G+AE  +  S 
Sbjct: 91  VLHRYLDTPVGEHWPIAGGFATVQPNSTMSINAIEGYPLEDFSAEAVRAGIAEAQKVASG 150

Query: 175 ATTDLEKAEAQIGVDVHSAL 194
           + ++ + AEA+I ++V   L
Sbjct: 151 SGSEQDIAEAKIELEVLETL 170


>gi|157872893|ref|XP_001684970.1| putative ATP synthase, epsilon chain [Leishmania major strain
           Friedlin]
 gi|68128040|emb|CAJ06882.1| putative ATP synthase, epsilon chain [Leishmania major strain
           Friedlin]
          Length = 181

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           T+   +    E   KE  V  V +    G+ GV PGH   I +L P  L+V   DG   K
Sbjct: 48  TLRLTVTRQDEFLFKETPVKCVTIVGVNGECGVYPGHAYEITQLTPAPLTVEMPDGT-VK 106

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA--EA 184
           K+F S GFA I+     DI  VE +P+ ++D    +K LA+    L+SA  D  +A  E 
Sbjct: 107 KFFTSGGFAHINNEGSCDINCVECIPLTELDVDAAEKALAQQQSALNSAHDDKARAVIEI 166

Query: 185 QIGV 188
           +IGV
Sbjct: 167 RIGV 170


>gi|195163511|ref|XP_002022593.1| GL12886 [Drosophila persimilis]
 gi|198476962|ref|XP_002136827.1| GA22488 [Drosophila pseudoobscura pseudoobscura]
 gi|194104585|gb|EDW26628.1| GL12886 [Drosophila persimilis]
 gi|198145152|gb|EDY71856.1| GA22488 [Drosophila pseudoobscura pseudoobscura]
          Length = 157

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 3/97 (3%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK--KYFVSSGFAFIHANSVAD 144
           V  + VP+ +G  G+L  HVPT+A LKPGV+ V D ND K  KYFVSSG   ++ +S   
Sbjct: 44  VRQIDVPSFSGAFGILAKHVPTLAVLKPGVVQVVD-NDGKTTKYFVSSGSVTVNEDSSVQ 102

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
           ++A EA  +  ID +  ++ L+++  +LSSA  D  K
Sbjct: 103 VLAEEAHNVADIDVAEARQLLSKYQSQLSSAGDDKAK 139


>gi|149235065|ref|XP_001523411.1| ATP synthase delta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146452820|gb|EDK47076.1| ATP synthase delta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 160

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 62  TPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD 121
           T  +    L ++  LPY +  S ++V  V +P+  G +G+L  H+P + +L+PG+L V  
Sbjct: 23  TEAAASDALKLSLALPYQTLYSDQDVQQVNLPSVNGDLGILANHIPVVEQLRPGLLEVIL 82

Query: 122 GN-DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
            N ++++YFVS G A +   +   I A+EA   +  D + V+  +++  ++  S    + 
Sbjct: 83  KNGESEQYFVSGGLAMVQPGNKLTISAIEAFKPEDFDVNAVKNMISDAQKRAESGDEKV- 141

Query: 181 KAEAQIGVDVHSAL 194
            AEA I ++V  AL
Sbjct: 142 AAEASIELEVLEAL 155


>gi|84995484|ref|XP_952464.1| ATP synthase delta chain, mitochondrial [Theileria annulata]
 gi|65302625|emb|CAI74732.1| ATP synthase delta chain, mitochondrial [Theileria annulata]
          Length = 154

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 11/91 (12%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGV--LSVHDGNDTKKYFVSSGFAFIHANS--- 141
           V  + VP   G   V PGH P ++ LKPGV   S+ D N+  K+F+SSGF F++  S   
Sbjct: 37  VKNLTVPGYDGYFTVTPGHSPMLSTLKPGVVSFSLKDSNEVHKFFISSGF-FVYRQSDDS 95

Query: 142 -VADIIAVEAVPIDQIDP----SLVQKGLAE 167
             AD++ VE VP+DQ+D     S++Q+ L+E
Sbjct: 96  HTADVMGVEIVPLDQLDKERATSVLQEVLSE 126


>gi|225562942|gb|EEH11221.1| ATP synthase subunit delta [Ajellomyces capsulatus G186AR]
          Length = 102

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 99  MGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
           MGVL  HVP+I +L PG++ +  +   TK++F+S GFA +  +S   I AVEA P++   
Sbjct: 1   MGVLANHVPSIEQLNPGLVEIIEESGGTKQFFLSGGFAVVQPDSQLSINAVEAYPLEDFS 60

Query: 158 PSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
              V+  +AE  +  S   ++ + AEA+I ++V  +L +AL
Sbjct: 61  AEAVKAQIAEAQKVASGGGSEQDIAEAKIELEVLESLQAAL 101


>gi|23015480|ref|ZP_00055255.1| COG0355: F0F1-type ATP synthase, epsilon subunit (mitochondrial
           delta subunit) [Magnetospirillum magnetotacticum MS-1]
          Length = 133

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND- 124
           +  K+    V P A  L + +VDMV+VP S G  G L  H P I  ++PGV+ +HDG   
Sbjct: 1   MAEKIQFELVSP-AKLLVSSKVDMVVVPGSEGDFGALALHAPMITTVRPGVIDIHDGGKV 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +   FV+ GFA ++   +  ++A EA+P+ ++   L +         L  A ++ EKA A
Sbjct: 60  SSSIFVAGGFAEVNEERIT-VLAEEAIPVAELTAELAEARKKAAKDALDDAKSEREKASA 118


>gi|148699644|gb|EDL31591.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_b [Mus musculus]
          Length = 186

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 3/91 (3%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           +++  F  P      +  V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T 
Sbjct: 62  QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGT-TT 120

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
           KYFVSSG   ++A+S   ++A EAV +D +D
Sbjct: 121 KYFVSSGSVTVNADSSVQLLAEEAVTLDMLD 151


>gi|195045498|ref|XP_001991984.1| GH24459 [Drosophila grimshawi]
 gi|193892825|gb|EDV91691.1| GH24459 [Drosophila grimshawi]
          Length = 157

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
           R     S    + + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ 
Sbjct: 16  RLAQKRSYSDDMKLTFAAANQTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQ 75

Query: 119 VHDGNDTK--KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           V D N+ K  KYFVSSG   ++ +S   ++A EA  +  ID S  ++ L+++   LSSA 
Sbjct: 76  VID-NEGKLTKYFVSSGSVTVNEDSSVQVLAEEAHNVADIDVSEARQLLSKYQSALSSAG 134

Query: 177 TDLEK 181
           +D  K
Sbjct: 135 SDKAK 139


>gi|83313237|ref|YP_423501.1| ATP synthase epsilon chain [Magnetospirillum magneticum AMB-1]
 gi|119367743|sp|Q2VZN3.1|ATPE_MAGMM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|82948078|dbj|BAE52942.1| ATP synthase epsilon chain [Magnetospirillum magneticum AMB-1]
          Length = 133

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND- 124
           +  K+    V P A  L + +VDMV+VP + G  G L  H P I  ++PGV+ +HDG   
Sbjct: 1   MAEKIQFELVSP-AKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKV 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +   FV+ GFA ++   +  ++A EA+P+ ++   + +       + L  A +D +KA A
Sbjct: 60  SSSVFVAGGFAEVNEERIT-VLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHA 118


>gi|338532026|ref|YP_004665360.1| F0F1 ATP synthase subunit epsilon [Myxococcus fulvus HW-1]
 gi|337258122|gb|AEI64282.1| F0F1 ATP synthase subunit epsilon [Myxococcus fulvus HW-1]
          Length = 136

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 2/111 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KLTV  V P    LS  + D  IVP   G  GV PGH P ++ ++PG L++ +G   + 
Sbjct: 2   AKLTVEIVTPEKRILSV-QADEAIVPGGRGLFGVRPGHTPFLSLMEPGALTLIEGGRRES 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           YFV+ GF  +  + V  ++A  A P+  ID    ++ +AE  ++L   +++
Sbjct: 61  YFVAGGFVEVGNDKVL-VLADAAEPVTGIDVDGARRRMAEAQERLKGLSSE 110


>gi|428211874|ref|YP_007085018.1| ATP synthase F1 subunit epsilon [Oscillatoria acuminata PCC 6304]
 gi|428000255|gb|AFY81098.1| ATP synthase, F1 epsilon subunit [Oscillatoria acuminata PCC 6304]
          Length = 160

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L VN + P  +  +A   + VI+P STGQ+G+L GHV  +  +K GV+ +   N     F
Sbjct: 3   LNVNVITPSKTIWNAPSSE-VILPTSTGQIGILSGHVALVTFIKVGVMRIRYQNTWIPIF 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           V  GFA I  + V  ++  +A   D+IDP +    L +   +LS A+  LEK  AQ+ + 
Sbjct: 62  VKGGFAEIEGDIVT-VLVNDAERGDRIDPEIAHSELEKAQAQLSQASNSLEKIRAQLFLK 120

Query: 190 VHSALNSA 197
              A ++A
Sbjct: 121 QARARDTA 128


>gi|326935561|ref|XP_003213838.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Meleagris gallopavo]
          Length = 144

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 8/100 (8%)

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P++ TS+P     + V  + +  + K+VD   VP  TG  G+L  HVPT+  LKPGV++V
Sbjct: 39  PESSTSVPPMKMESRV--FYNGANVKQVD---VPTLTGSFGILASHVPTLQVLKPGVVTV 93

Query: 120 H--DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
           +  DG  T KYFVSSG   ++A+S   ++A EAV +D +D
Sbjct: 94  YGEDGTAT-KYFVSSGSVTVNADSTVQVLAEEAVTMDMLD 132


>gi|195448643|ref|XP_002071749.1| GK24980 [Drosophila willistoni]
 gi|194167834|gb|EDW82735.1| GK24980 [Drosophila willistoni]
          Length = 160

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV- 119
           Q+  +   ++ + F     +   A  V  + VP+ +G  G+L  HVPT+A LKPGV+ V 
Sbjct: 21  QSRRNYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGAFGILAKHVPTLAVLKPGVVQVV 80

Query: 120 -HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
            +DG  TK YFVSSG   ++ +S   ++A EA  +  ID +  ++ L+++  +LSSA  D
Sbjct: 81  ENDGKLTK-YFVSSGSVTVNEDSSVQVLAEEAHNVADIDVNEARQLLSKYQSQLSSAGDD 139

Query: 179 LEK 181
             K
Sbjct: 140 KAK 142


>gi|163850894|ref|YP_001638937.1| F0F1 ATP synthase subunit epsilon [Methylobacterium extorquens PA1]
 gi|218529717|ref|YP_002420533.1| F0F1 ATP synthase subunit epsilon [Methylobacterium extorquens CM4]
 gi|240138024|ref|YP_002962496.1| ATP synthase F1 sector epsilon subunit [Methylobacterium extorquens
           AM1]
 gi|254560585|ref|YP_003067680.1| ATP synthase F1 sector subunit epsilon [Methylobacterium extorquens
           DM4]
 gi|418058335|ref|ZP_12696310.1| ATP synthase epsilon chain [Methylobacterium extorquens DSM 13060]
 gi|163662499|gb|ABY29866.1| ATP synthase F1, epsilon subunit [Methylobacterium extorquens PA1]
 gi|218522020|gb|ACK82605.1| ATP synthase F1, epsilon subunit [Methylobacterium extorquens CM4]
 gi|240007993|gb|ACS39219.1| ATP synthase F1 sector epsilon subunit [Methylobacterium extorquens
           AM1]
 gi|254267863|emb|CAX23729.1| ATP synthase F1 sector epsilon subunit [Methylobacterium extorquens
           DM4]
 gi|373568067|gb|EHP94021.1| ATP synthase epsilon chain [Methylobacterium extorquens DSM 13060]
          Length = 133

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 6/114 (5%)

Query: 73  NFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD--GNDTKKYFV 130
           +FV P  + L + EV+ V +P S G+M VLPGH P +  LK GV++V +  GN  + Y V
Sbjct: 7   DFVGPERT-LYSGEVEAVQLPGSEGEMTVLPGHAPVLTTLKVGVITVTETTGNGMRIY-V 64

Query: 131 SSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
             GFA I   SV  ++A  A PI+++ P ++ + + E  + +  AT DL K EA
Sbjct: 65  QGGFADIGPKSVT-VLAERAAPIEEVTPGMIDREI-EAVELVRDATQDLAKREA 116


>gi|115379931|ref|ZP_01466988.1| ATP synthase F1, epsilon subunit [Stigmatella aurantiaca DW4/3-1]
 gi|310818218|ref|YP_003950576.1| ATP synthase f1 subunit epsilon [Stigmatella aurantiaca DW4/3-1]
 gi|115363056|gb|EAU62234.1| ATP synthase F1, epsilon subunit [Stigmatella aurantiaca DW4/3-1]
 gi|309391290|gb|ADO68749.1| ATP synthase F1, epsilon subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 134

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 2/111 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KLTV  V P    LS  + D  IVP S G  GV PGH P ++ ++PG L++ D    + 
Sbjct: 2   AKLTVEIVTPEKRILSV-QADEAIVPGSRGLFGVRPGHAPFLSLVEPGALTLIDAGRRES 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +F++ GF  +  + V  ++A  A P+  ID    +K LAE  ++L   +++
Sbjct: 61  FFIAGGFVEVGNDKVL-VLADGAEPVGGIDVEAARKRLAEAQERLKGLSSE 110


>gi|429327356|gb|AFZ79116.1| ATP synthase delta/epsilon chain, putative [Babesia equi]
          Length = 153

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 11/113 (9%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDG 122
           ++ + L ++ +  + S L+   +  V +P S G   V  GH P ++ LKPG++S+   D 
Sbjct: 14  TVGNGLQLSLLSSHESFLTKFPIKSVTLPGSEGYFTVTQGHSPLLSTLKPGIISISAQDS 73

Query: 123 NDTKKYFVSSGFAFIHANS----VADIIAVEAVPIDQIDP----SLVQKGLAE 167
           N+  KYF+SSGF F++  S     A+++ VE VP+D +D     S++Q+ LAE
Sbjct: 74  NEVTKYFISSGF-FVYRQSDNTNSAEVVGVEIVPLDHLDKERATSVLQEVLAE 125


>gi|188580720|ref|YP_001924165.1| F0F1 ATP synthase subunit epsilon [Methylobacterium populi BJ001]
 gi|179344218|gb|ACB79630.1| ATP synthase F1, epsilon subunit [Methylobacterium populi BJ001]
          Length = 133

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)

Query: 73  NFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVS 131
           +FV P  + L + EV+ V +P + G+M VLPGH P +  LK GV++V +   + K+ +V 
Sbjct: 7   DFVGPERT-LYSGEVEAVQLPGAEGEMTVLPGHAPVLTTLKVGVITVTETAGNGKRIYVQ 65

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
            GFA I   SV  ++A  A PI+++ P+++ K + E  +    AT DL + EA
Sbjct: 66  GGFADIGPTSVT-VLAERAAPIEELTPAMIDKEI-EAAELARDATQDLARREA 116


>gi|151301059|ref|NP_001093091.1| H+ transporting ATP synthase delta subunit [Bombyx mori]
 gi|95102732|gb|ABF51307.1| H+ transporting ATP synthase delta subunit [Bombyx mori]
          Length = 161

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 3/93 (3%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK--KYFVSSGFAFIHANSVAD 144
           V  + VP+ +G  G+LP HVPT+A L+PGV+++ + ND K  K FVSSG   ++ +S   
Sbjct: 47  VKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILE-NDGKQNKIFVSSGTITVNDDSSVQ 105

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           ++A EA P++ ID S  Q+ L++   + +SA+ 
Sbjct: 106 VLAEEAHPLESIDRSAAQEALSKAQSEFNSASN 138


>gi|405953462|gb|EKC21119.1| ATP synthase subunit delta, mitochondrial [Crassostrea gigas]
          Length = 171

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADI 145
           +  V VP   G  G+LP HVPT+A L+PGV+SV  + ++TK  F SSG   ++ +    I
Sbjct: 55  IKQVNVPTINGVFGILPQHVPTLAVLQPGVVSVVVNDSETKNIFASSGSLTVNPDGSVHI 114

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           +A EA  +  +D +  ++G+ +      +A    +KAE QI VD + A+
Sbjct: 115 LAEEACELSDLDVNEAREGMTKAQHARDAAVEATDKAEFQIEVDAYEAI 163


>gi|452965344|gb|EME70368.1| ATP synthase epsilon chain [Magnetospirillum sp. SO-1]
          Length = 133

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND- 124
           +  K+    V P A  L + +VDMV+VP S G  G +  H P I  ++PGV+ +HDG   
Sbjct: 1   MADKIQFELVSP-AKLLVSSKVDMVVVPGSEGDFGAMALHAPMITTVRPGVIDIHDGGKV 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +   FV+ GFA ++   +  ++A EA+P++++   + +       + L  A  + +KA A
Sbjct: 60  SSSIFVAGGFAEVNEERIT-VLAEEAIPVNELTAEMAEARKKTAKEALDDAGNERDKAHA 118


>gi|71030354|ref|XP_764819.1| ATP synthase F1 subunit delta [Theileria parva strain Muguga]
 gi|68351775|gb|EAN32536.1| ATP synthase F1, delta subunit, putative [Theileria parva]
          Length = 164

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 11/91 (12%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGV--LSVHDGNDTKKYFVSSGFAFIHANS--- 141
           V  + VP   G   V PGH P ++ LKPGV   S+ D N+  K+F+SSGF F++  S   
Sbjct: 37  VKSLTVPGYDGYFTVTPGHSPMLSTLKPGVVSFSLKDSNEVHKFFISSGF-FVYRQSEES 95

Query: 142 -VADIIAVEAVPIDQIDP----SLVQKGLAE 167
             A+++ VE VP+DQ+D     S++Q+ L E
Sbjct: 96  HTAEVMGVEVVPLDQLDKERATSVLQEVLTE 126


>gi|340759484|ref|ZP_08696054.1| ATP synthase F1, epsilon subunit [Fusobacterium varium ATCC 27725]
 gi|251835608|gb|EES64147.1| ATP synthase F1, epsilon subunit [Fusobacterium varium ATCC 27725]
          Length = 134

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+ Y  ++  +E + ++V  + G+MG+LP H P +A L  G + +    + K YFVS GF
Sbjct: 8   VVNYQEKVLEQEAEFLLVRTTEGEMGILPNHSPFVAGLAIGEMKIRLNGNEKCYFVSGGF 67

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
             I +N+V  ++A EA+P + ID    +K   E   KL     D
Sbjct: 68  LEI-SNNVVTVLADEAMPCEMIDLERARKEAEEAKAKLDKLKED 110


>gi|114571339|ref|YP_758019.1| ATP synthase F1 subunit epsilon [Maricaulis maris MCS10]
 gi|119367744|sp|Q0AKW2.1|ATPE_MARMM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114341801|gb|ABI67081.1| ATP synthase F1 subcomplex epsilon subunit [Maricaulis maris MCS10]
          Length = 133

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 2/119 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL  + V P    L A  VD V+VP   G  GVLP H P ++ ++PG ++V D    
Sbjct: 1   MADKLHFDLVSPE-RRLFAGNVDQVVVPGEEGDFGVLPNHAPFMSVIRPGAITVIDDGKE 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
            + F+  GFA + A  +  I+A EA+ +  ID   + + L++  + +++A  + E+ +A
Sbjct: 60  TRTFIHGGFAEVTAAGLT-ILAEEAIAVADIDTEKLARDLSDAREDVTAAKDEEERDQA 117


>gi|114604|sp|P05441.1|ATPE_RHOBL RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|45981|emb|CAA77304.1| ATPase epsilon subunit [Rhodobacter blasticus]
          Length = 130

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 3/118 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + + L  + V P    L++ +   V +P + G M  + GH PTI  L+PG+L       T
Sbjct: 1   MAATLQFDLVSPE-RRLASVQATEVQIPGAAGDMTAMQGHAPTITTLRPGILRAVSAEGT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           K Y V+ GFA I A  V+ ++A  AVP+D++D  L+ + +A+ +   SS   D + AE
Sbjct: 60  KAYVVTGGFAEISATGVS-VLAERAVPLDEMDAKLMDQLVADASAA-SSVGVDKDTAE 115


>gi|355755273|gb|EHH59020.1| F-ATPase delta subunit, partial [Macaca fascicularis]
          Length = 123

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 5/115 (4%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVAD 144
           V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T KYFVSSG   ++A+S   
Sbjct: 10  VRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSKYFVSSGSIAVNADSSVQ 68

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQ-KLSSATTDLEKAEAQIGVDVHSALNSAL 198
           ++A EAV    ++P    K   E  Q +L  A  +  +AE QI ++ + AL  AL
Sbjct: 69  LLAEEAVTAS-LNPLQAAKANLEKAQAELLGAADEATRAEIQIRIEANEALVKAL 122


>gi|222151999|ref|YP_002561159.1| ATP synthase F1 epsilon subunit [Macrococcus caseolyticus JCSC5402]
 gi|254809372|sp|B9E8E5.1|ATPE_MACCJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|222121128|dbj|BAH18463.1| ATP synthase F1 epsilon subunit [Macrococcus caseolyticus JCSC5402]
          Length = 136

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 11/133 (8%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTK 126
           +KL +  V P  S  S  E +++++   +G+MGV+ GH+PT+A LK G + V   GND  
Sbjct: 2   NKLAIEIVTPNGSIYSETEAELIVLQTESGEMGVMAGHIPTVAPLKIGAVRVTKPGNDKD 61

Query: 127 KYFVSSGFAFIHANSVADII----AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
              V+ GFA I    V+ ++      E + I++   SL ++  A  N+   +A  D  +A
Sbjct: 62  YIAVTEGFAEIRPQQVSVLVQAAEQAEGIDIERAKESL-KRAEARLNED-KAAHVDFHRA 119

Query: 183 EAQIGVDVHSALN 195
           E  +    H A+N
Sbjct: 120 ERAL----HRAIN 128


>gi|170744667|ref|YP_001773322.1| F0F1 ATP synthase subunit epsilon [Methylobacterium sp. 4-46]
 gi|168198941|gb|ACA20888.1| ATP synthase F1, epsilon subunit [Methylobacterium sp. 4-46]
          Length = 133

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKKYFVSSGFAFIHANSVADI 145
           VD V +P S G+M VLPGH P +  LK GVL + +G    K+  V  GFA I+A  +  +
Sbjct: 20  VDAVQLPGSEGEMTVLPGHAPVLTTLKTGVLVITEGPQHGKRVLVRGGFAEINATGLI-V 78

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
           IA  A P++++ P  +   +A   + L  AT DL+K
Sbjct: 79  IAERATPVEELTPESIDAEIANV-ETLRDATDDLDK 113


>gi|405351550|ref|ZP_11022968.1| ATP synthase epsilon chain [Chondromyces apiculatus DSM 436]
 gi|397092851|gb|EJJ23583.1| ATP synthase epsilon chain [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 136

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 7/120 (5%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KLTV  V P    LS +  D  IVP   G  GV PGH P ++ ++PG L++ +G   + 
Sbjct: 2   AKLTVEIVTPEKRILSVQ-ADEAIVPGGRGLFGVRPGHTPFLSLMEPGALTLIEGGRRES 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS-----ATTDLEKA 182
           YFV+ GF  +  + V  ++A  A P+  ID    ++ + E  +++       A  +LE+A
Sbjct: 61  YFVAGGFVEVGNDKVL-VLADAAEPVAGIDVEGARRRMTEAQERMKGMSAEDARFELEQA 119


>gi|187251925|ref|YP_001876407.1| ATP synthase F1 subunit epsilon [Elusimicrobium minutum Pei191]
 gi|254809366|sp|B2KEX4.1|ATPE_ELUMP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|186972085|gb|ACC99070.1| ATP synthase F1, epsilon subunit [Elusimicrobium minutum Pei191]
          Length = 135

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KLT +F+ P    +  +E D V +PA  G+MGVLPGHV ++  L PG +   +  + K++
Sbjct: 3   KLTFSFISPERPIVQNQEADFVALPAFEGEMGVLPGHVNSVVILMPGFVRFKNNGEEKEF 62

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS--ATTDLEKAEAQI 186
            +  GFA +  + + D+ A EA   ++      ++ L    + LSS  A  D+E AE Q+
Sbjct: 63  AIIDGFAEVFKDHI-DVFASEASLSEEKQSEEQKQRLERAKKALSSQDADIDIELAEIQL 121

Query: 187 GVDV 190
              +
Sbjct: 122 KTQI 125


>gi|341899011|gb|EGT54946.1| hypothetical protein CAEBREN_23479 [Caenorhabditis brenneri]
          Length = 304

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 2/100 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADI 145
           V  V VP S G +GVL  HVPTI  LKPGV+SV     + ++ FVSSG   ++ +    +
Sbjct: 59  VKQVDVPTSAGMVGVLANHVPTIGVLKPGVVSVTTTEGSVQRLFVSSGTLSVNIDGSCQV 118

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +A E + ++ ID S  +  L E  Q+ S   +++ +AEAQ
Sbjct: 119 LAEEVLKVEDIDESAARAEL-ESAQRASGEGSEVARAEAQ 157


>gi|357039220|ref|ZP_09101015.1| ATP synthase epsilon chain [Desulfotomaculum gibsoniae DSM 7213]
 gi|355358684|gb|EHG06450.1| ATP synthase epsilon chain [Desulfotomaculum gibsoniae DSM 7213]
          Length = 135

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 3/103 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           ++++  V++P + G++GVLP H P ++ LK G+  VH      K  VS GFA I  N V 
Sbjct: 20  SQDIRFVVLPGTEGELGVLPEHAPLVSALKTGLARVHHEGKVLKIAVSGGFAEIRNNKVT 79

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE--KAEA 184
            ++A  A   DQID    Q       Q+LS+   D++  +AEA
Sbjct: 80  -VLANAAEREDQIDVERAQAAKERAEQRLSAGGQDIDVIRAEA 121


>gi|373498958|ref|ZP_09589454.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 12_1B]
 gi|404369396|ref|ZP_10974735.1| ATP synthase F1, epsilon subunit [Fusobacterium ulcerans ATCC
           49185]
 gi|313690593|gb|EFS27428.1| ATP synthase F1, epsilon subunit [Fusobacterium ulcerans ATCC
           49185]
 gi|371959849|gb|EHO77522.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 12_1B]
          Length = 134

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+ Y  ++  ++ + ++V  + G+MG+LP H P +A L  G + +    + K YFVS GF
Sbjct: 8   VVNYQEKVLEQDAEFLLVRTTEGEMGILPNHSPFVAGLAIGEMKIRLNGEEKCYFVSGGF 67

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
             I  N+V  ++A EA+P + ID    +K   E   KL     D
Sbjct: 68  LEISNNNVT-VLADEAMPCEMIDLERARKEAEEAKAKLDKLKED 110


>gi|403221834|dbj|BAM39966.1| ATP synthase delta chain, mitochondrial [Theileria orientalis
           strain Shintoku]
          Length = 164

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 21/129 (16%)

Query: 59  RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL- 117
           R  + TS   +L  + +  + S  +   V  V +P   G   V  GH P ++ LKPGV+ 
Sbjct: 9   RFASSTSSGKELLFSLLSSHESLYTKVPVKNVTLPGYDGYFTVTAGHSPMLSTLKPGVIS 68

Query: 118 -SVHDGNDTKKYFVSSGFAFIHANSV--------------ADIIAVEAVPIDQIDP---- 158
            S+ D N+  KYF+SSGF F++   V              AD++ VE VP+DQ+D     
Sbjct: 69  FSLKDSNEVVKYFISSGF-FVYKQLVFYLNNFYRSDESHTADVMGVEVVPLDQLDKDRAT 127

Query: 159 SLVQKGLAE 167
           S++Q+ LAE
Sbjct: 128 SVLQEVLAE 136


>gi|294055642|ref|YP_003549300.1| ATP synthase F1 subunit epsilon [Coraliomargarita akajimensis DSM
           45221]
 gi|293614975|gb|ADE55130.1| ATP synthase F1, epsilon subunit [Coraliomargarita akajimensis DSM
           45221]
          Length = 137

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P    LS  E D V++P  +G+ G+L GH+P + +L  G L V  G  T+   
Sbjct: 3   LTLEIITPDDKVLST-EADQVVLPTESGETGILTGHIPLVTKLVAGELKVIKGAGTEYIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           VSSGFA +  N+++ ++   AV +D+ID       L+E       A   L+KAE + G
Sbjct: 62  VSSGFAKVIGNTIS-VLTEAAVDVDEID-------LSEVESARERALEALKKAEEEGG 111


>gi|108763162|ref|YP_635035.1| ATP synthase F0F1 subunit epsilon [Myxococcus xanthus DK 1622]
 gi|119367749|sp|Q1CX38.1|ATPE_MYXXD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|108467042|gb|ABF92227.1| ATP synthase F1, epsilon subunit [Myxococcus xanthus DK 1622]
          Length = 136

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KLTV  V P    LS +  D  IVP   G  GV PGH P ++ ++PG L++ +    + 
Sbjct: 2   AKLTVEIVTPEKRILSVQ-ADEAIVPGGRGLFGVRPGHTPFLSLMEPGALTLIESGRRES 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           YFV+ GF  +  + V  ++A  A P+  ID    ++ +AE  +++   +++
Sbjct: 61  YFVAGGFVEVGNDKVL-VLADAAEPVTGIDVEGARRRMAEAQERMKGMSSE 110


>gi|403068607|ref|ZP_10909939.1| H(+)-transporting ATP synthase epsilon chain [Oceanobacillus sp.
           Ndiop]
          Length = 132

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 1/101 (0%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           DM++  A TG++G+LPGH+P +A L+   + + +GN+T+K  ++ GF  +  + V  I+A
Sbjct: 21  DMIVCKAETGEIGILPGHIPLVAPLQISAVRLKNGNETQKLAINGGFMEVQPDKVT-ILA 79

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
             A    +ID    Q+      ++L +   +++K  A++ +
Sbjct: 80  QSAEKASEIDVERAQEAKERAERRLQANQDNIDKTRAELAL 120


>gi|194769360|ref|XP_001966772.1| GF19203 [Drosophila ananassae]
 gi|190618293|gb|EDV33817.1| GF19203 [Drosophila ananassae]
          Length = 157

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 5/134 (3%)

Query: 46  MEPPKTPSVYMT--PRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLP 103
           M   KT  +  T   R     S   ++ + F     +   A  V  + VP+ +G  G+L 
Sbjct: 1   MSFSKTARLLATRGARMVQSRSYSDEMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILA 60

Query: 104 GHVPTIAELKPGVLSVHDGNDTK--KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLV 161
            HVPT+A LKPGV+ V + ND K  K+F+SSG   ++ +S   ++A EA  ++ ID +  
Sbjct: 61  KHVPTLAVLKPGVVQVVE-NDGKLIKFFISSGSVTVNDDSSVQVLAEEAHNVEDIDINEA 119

Query: 162 QKGLAEFNQKLSSA 175
           ++ L ++  +LSSA
Sbjct: 120 RQLLTKYQSQLSSA 133


>gi|114328719|ref|YP_745876.1| ATP synthase subunit epsilon [Granulibacter bethesdensis CGDNIH1]
 gi|119367733|sp|Q0BQE9.1|ATPE_GRABC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114316893|gb|ABI62953.1| ATP synthase epsilon chain [Granulibacter bethesdensis CGDNIH1]
          Length = 135

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ VDMV++PA+ G++GVLPGH P I  L+ G + ++ +G  T + +V+ GFA I   
Sbjct: 15  LLSRSVDMVVIPAAEGELGVLPGHAPMIVLLQGGTIRLYQNGQVTDRLYVAGGFAEITPE 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAE 167
               ++A +A P+ +I  +  +K LA+
Sbjct: 75  RCT-VLADQARPVAEISATEAEKRLAD 100


>gi|312383378|gb|EFR28490.1| hypothetical protein AND_03504 [Anopheles darlingi]
          Length = 159

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 74  FVLPYASEL--SAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFV 130
           F L  A+++   +  +  V VP+ +G  G+LP HVPT+A LKPGV++V++ +   KK FV
Sbjct: 31  FTLAAANKVFYDSANIRQVDVPSFSGAFGILPKHVPTLAVLKPGVVTVYENDGAQKKIFV 90

Query: 131 SSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGL 165
           SSG   ++ ++   ++A EA P++ +D S  ++ L
Sbjct: 91  SSGTVTVNEDASVQVLAEEAHPVEDLDASACRELL 125


>gi|154342069|ref|XP_001566986.1| putative ATP synthase, epsilon chain [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134064311|emb|CAM40512.1| putative ATP synthase, epsilon chain [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 181

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           T+   +    E   KE  V  V V    G+ GV P H   I +L P  L+V   DG   +
Sbjct: 48  TLRLTITRQDEFLFKEAPVKCVTVMGVNGENGVYPSHAYKITQLAPAPLTVEMTDGT-VE 106

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           K+F S GFA I+     DI  VE +P+ ++D    +K LA+    LSSA  +  KA  +I
Sbjct: 107 KFFTSGGFAHINNEGSCDINCVECIPLSELDVDAAEKALAQQQSALSSAYDEKAKAVVEI 166

Query: 187 GVDV 190
            + V
Sbjct: 167 RISV 170


>gi|333924778|ref|YP_004498358.1| ATP synthase subunit epsilon [Desulfotomaculum carboxydivorans
           CO-1-SRB]
 gi|333750339|gb|AEF95446.1| ATP synthase epsilon chain [Desulfotomaculum carboxydivorans
           CO-1-SRB]
          Length = 132

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           ++E+D ++ P + G++G+LP H P +  LK GV+ V       K  VS GF  +  NS  
Sbjct: 18  SEEIDFIVAPGADGELGILPEHAPLVTALKIGVMRVQQDGKFFKVAVSGGFMEVK-NSRV 76

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
            ++A  A   D+ID    +       Q+L+S + D++ A A+I   +H A+N
Sbjct: 77  VVLADTAERADEIDVERARAAKQRAEQRLASKSPDIDVARAEIA--LHKAIN 126


>gi|258517233|ref|YP_003193455.1| F0F1 ATP synthase subunit epsilon [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780938|gb|ACV64832.1| ATP synthase F1, epsilon subunit [Desulfotomaculum acetoxidans DSM
           771]
          Length = 133

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 2/114 (1%)

Query: 72  VNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVS 131
           ++ V P    LS +++  V+VP   G++G LP H P ++ LK G++ V       K  +S
Sbjct: 8   LDIVTPERKVLS-EDIGFVVVPGVAGELGFLPEHTPLVSALKTGIVRVQQDGKEFKIAIS 66

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           SGF  +  NS   I+A  A   DQID S  +   A   Q+LSS+++D++ A A+
Sbjct: 67  SGFVEVK-NSRVVILADAAERADQIDKSRAEAAKARAEQRLSSSSSDIDVARAE 119


>gi|163792321|ref|ZP_02186298.1| H+-transporting two-sector ATPase, delta/epsilon subunit [alpha
           proteobacterium BAL199]
 gi|159182026|gb|EDP66535.1| H+-transporting two-sector ATPase, delta/epsilon subunit [alpha
           proteobacterium BAL199]
          Length = 137

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 3/96 (3%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSV 142
           +++V+MV+VP + G  GVLP H P I+ L  GV+ +++G     + FV+ GFA +     
Sbjct: 18  SRDVEMVVVPGTEGYFGVLPRHAPMISTLSAGVIDIYEGGAVVDRIFVAGGFAEVTETRC 77

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
             ++A EA+P+  +D +  +K +A+ ++ +   TTD
Sbjct: 78  T-VLAEEAMPLGDVDVAATEKSIAD-DRDVLKDTTD 111


>gi|11467697|ref|NP_050749.1| ATP synthase CF1 epsilon subunit [Guillardia theta]
 gi|5915728|sp|O78492.1|ATPE_GUITH RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|3603022|gb|AAC35683.1| ATP synthase CF1 subunit e (chloroplast) [Guillardia theta]
          Length = 131

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P+STGQ+G+L GH P +  L  GV+ V    D     +  GFA I  + +  I+   
Sbjct: 22  VILPSSTGQLGILKGHAPLLTALDIGVMRVRVDRDWTPIVLLGGFAEIENDELT-ILVNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           A    QID    Q+ L E   K + ATT+ E+ EA
Sbjct: 81  AEEASQIDRDQAQRDLEEMTVKFNEATTNKERIEA 115


>gi|134300980|ref|YP_001114476.1| F0F1 ATP synthase subunit epsilon [Desulfotomaculum reducens MI-1]
 gi|189081362|sp|A4J998.1|ATPE_DESRM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|134053680|gb|ABO51651.1| ATP synthase F1 subcomplex epsilon subunit [Desulfotomaculum
           reducens MI-1]
          Length = 132

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           ++E+D V+ P + G++G+LP H P +  LK G L V  G    K  VS GF  +  NS  
Sbjct: 18  SEEIDFVVAPGADGELGILPEHAPLVTALKVGTLRVQQGGKFFKVAVSGGFMEVK-NSRI 76

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
            ++A  A   DQID    +       Q+L+S  ++++   A+I   +H A+N
Sbjct: 77  VVLADTAERADQIDVERAKAAKQRAEQRLNSKGSEIDVHRAEIA--LHKAIN 126


>gi|414154212|ref|ZP_11410532.1| ATP synthase epsilon chain [Desulfotomaculum hydrothermale Lam5 =
           DSM 18033]
 gi|411454397|emb|CCO08436.1| ATP synthase epsilon chain [Desulfotomaculum hydrothermale Lam5 =
           DSM 18033]
          Length = 132

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           ++E++ ++ P + G++G+LP H P +  LK GVL +  G    K  VS GF  +  NS  
Sbjct: 18  SEEIEFIVAPGADGELGILPEHAPLVTALKIGVLRIQQGGKFFKVAVSGGFMEVK-NSRV 76

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
            ++A  A   DQID    +       Q+L++ + D++ A A++   +  ALN
Sbjct: 77  VVLADTAERADQIDVERARAAKQRAEQRLTAKSPDIDVARAEVA--LQKALN 126


>gi|240279766|gb|EER43271.1| ATP synthase subunit delta [Ajellomyces capsulatus H143]
          Length = 180

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKYFVSSGFAFIHANSVAD 144
           +V  V +PA +G MGVL  HVP+I +L PG++  + +   TK++F+S GFA +  +S   
Sbjct: 102 DVVQVNIPAESGVMGVLANHVPSIEQLNPGLVEIIEESGGTKQFFLSGGFAVVQPDSQLS 161

Query: 145 IIAVEAVPIDQI 156
           I AVEA P++  
Sbjct: 162 INAVEAYPLEDF 173


>gi|154251919|ref|YP_001412743.1| ATP synthase F1 subunit epsilon [Parvibaculum lavamentivorans DS-1]
 gi|171769591|sp|A7HT53.1|ATPE_PARL1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|154155869|gb|ABS63086.1| ATP synthase F1, epsilon subunit [Parvibaculum lavamentivorans
           DS-1]
          Length = 132

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 3/120 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGND 124
           +  KL  + V P     S  +VDMV++P S G MG++ GH P ++ L+PG++ V ++G  
Sbjct: 1   MAEKLNFDLVSPERLLFSG-QVDMVVIPGSEGDMGIMAGHAPVMSTLRPGIIEVENEGAP 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
            ++ FV  GFA +    +  ++A   VP+  +D + + + +A  ++ ++ A  D ++  A
Sbjct: 60  RQRIFVRGGFAEVTPAGLT-VLAEFTVPLADLDATALDREIALADKDVADAKNDDKRQSA 118


>gi|365857090|ref|ZP_09397089.1| ATP synthase F1, epsilon subunit [Acetobacteraceae bacterium
           AT-5844]
 gi|363716828|gb|EHM00222.1| ATP synthase F1, epsilon subunit [Acetobacteraceae bacterium
           AT-5844]
          Length = 136

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHAN 140
           L ++ V+M I+PA+ G MG+L GH P I  LK GV+ V  G   T++ FV+ GFA I   
Sbjct: 15  LLSRPVEMAIIPAAEGDMGILAGHSPMIIALKGGVIEVRGGGHATERLFVAGGFAEITPG 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            V  ++A EA P+ Q+  S  +  + +       A  D  +A  Q
Sbjct: 75  RVT-VLADEATPLAQLSRSEAEARVKDAEAAYEKAVDDTPEAREQ 118


>gi|403383655|ref|ZP_10925712.1| F0F1 ATP synthase subunit epsilon [Kurthia sp. JC30]
          Length = 135

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 13/122 (10%)

Query: 72  VNFVLP----YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TK 126
           VN V P    Y SE S     MV V A++G+MG+LPGH+PT+A L  GV+ V   N+ T+
Sbjct: 6   VNIVTPDGPVYDSEAS-----MVSVRATSGEMGILPGHIPTVAPLAVGVVRVQTANNKTE 60

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAEA 184
              VS GF  I A  V  I++  A   D ID +  ++ L     +L +     D+++AEA
Sbjct: 61  LVAVSGGFVEIRAEQVT-ILSPSAEMADSIDLARAKEALKRAETRLQAKKDGVDVKRAEA 119

Query: 185 QI 186
            +
Sbjct: 120 AL 121


>gi|389878841|ref|YP_006372406.1| F-type H+-transporting ATPase subunit epsilon [Tistrella mobilis
           KA081020-065]
 gi|388529625|gb|AFK54822.1| F-type H+-transporting ATPase epsilon chain [Tistrella mobilis
           KA081020-065]
          Length = 133

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGF 134
           L A++VDMV+VP S G  GVLPGH P IA ++PGV+ V++G     + FV+ G 
Sbjct: 16  LLARDVDMVVVPGSEGHFGVLPGHAPLIATMRPGVIEVYEGQTVVDRLFVAGGM 69


>gi|152977491|ref|YP_001377008.1| F0F1 ATP synthase subunit epsilon [Bacillus cytotoxicus NVH 391-98]
 gi|189081355|sp|A7GV55.1|ATPE_BACCN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|152026243|gb|ABS24013.1| ATP synthase F1, epsilon subunit [Bacillus cytotoxicus NVH 391-98]
          Length = 133

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           ++A  A   + ID     +      Q+L    A  D ++AE
Sbjct: 77  VLATSAEEANHIDTHRANEAKRRAEQRLQDKQAHVDFKRAE 117


>gi|350580769|ref|XP_003480894.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Sus
           scrofa]
          Length = 137

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 3/89 (3%)

Query: 112 LKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           L+PG++ VH  DG  T KYFVSSG   ++A+S   ++A EAV +D +DP + +  L +  
Sbjct: 49  LRPGLVVVHAEDGT-TSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDPGVAKANLEKAQ 107

Query: 170 QKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +L  A  +  +AE QI ++ + AL  AL
Sbjct: 108 SELLGAADEASRAEIQIRIEANEALVKAL 136


>gi|376403577|ref|YP_005089908.1| atpE gene product (chloroplast) [Pedinomonas minor]
 gi|229915484|gb|ACQ90828.1| CF1 epsilon subunit of ATP synthase [Pedinomonas minor]
          Length = 133

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +E + +I+P +TGQMGVL  H P I  L  G + V    + +   +  GFA +  N V  
Sbjct: 17  EEAEELILPTNTGQMGVLSNHAPLITALDIGAMMVRTKQEWRAVALMGGFALVKNNQVT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           I+  EA     IDP   +K   E   +L  A  + EK EA
Sbjct: 76  ILVNEAEASSTIDPREAEKAFEEAKTRLEQAQGEKEKVEA 115


>gi|296532597|ref|ZP_06895302.1| ATP synthase F1 sector epsilon subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296267088|gb|EFH13008.1| ATP synthase F1 sector epsilon subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 137

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVSSGFAFIHAN 140
           L ++ V+M I+PA+ G+MGVLPG  P I  LK GV+ V + G  T++ FV  GFA I   
Sbjct: 16  LLSRPVEMAIIPAAEGEMGVLPGMAPMIVALKGGVIRVQEKGAVTERLFVMGGFAEITPT 75

Query: 141 SVADIIAVEAVPIDQI 156
            V  ++A EA P+ ++
Sbjct: 76  RV-TVLADEATPVAEL 90


>gi|242020519|ref|XP_002430700.1| ATP synthase delta chain, putative [Pediculus humanus corporis]
 gi|212515890|gb|EEB17962.1| ATP synthase delta chain, putative [Pediculus humanus corporis]
          Length = 164

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANS 141
           A++V  + VP   G  G+LP HVP +  L PGV++V   DG+ +KK FVSSG   ++ +S
Sbjct: 49  AEDVKQIDVPTFNGVFGILPKHVPILGVLSPGVVTVFLKDGS-SKKIFVSSGTLCVNEDS 107

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
              ++A EA  ++ ID +  ++ L++   +L+SA+ D
Sbjct: 108 SVQVLAEEAHYLEDIDSNAAKESLSKAQSELASASPD 144


>gi|302846841|ref|XP_002954956.1| hypothetical protein VOLCADRAFT_95875 [Volvox carteri f.
           nagariensis]
 gi|208751253|gb|ACI31232.1| ATP synthase CF1 epsilon subunit [Volvox carteri]
 gi|261888180|gb|ACY06035.1| ATP synthase CF1 epsilon subunit [Volvox carteri f. nagariensis]
 gi|300259719|gb|EFJ43944.1| hypothetical protein VOLCADRAFT_95875 [Volvox carteri f.
           nagariensis]
          Length = 141

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG------NDTKKYFVSSGFAFIHA 139
           + D +I+P  TG+MGVL  H P I  L  G + +  G      +D   Y +  GFA +  
Sbjct: 18  QADEIILPTETGEMGVLKNHAPIITGLDVGAMLIRGGQATGSKDDWNSYAIMGGFALVKQ 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           N V  I+A EAV  + I+P        E  +   SA  +LEKAE 
Sbjct: 78  NQVT-ILANEAVSAENINPE-------EAKEAFESAKVNLEKAEG 114


>gi|301059564|ref|ZP_07200476.1| ATP synthase F1, epsilon subunit [delta proteobacterium NaphS2]
 gi|300446329|gb|EFK10182.1| ATP synthase F1, epsilon subunit [delta proteobacterium NaphS2]
          Length = 136

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 6/123 (4%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
            KL +  V P    +S +EVD+V+ P + G+ GVL  HVP ++ ++PG L    G+ T++
Sbjct: 2   GKLNLEVVTPEKVMVS-QEVDIVVAPGTMGEFGVLENHVPFLSGIEPGELRFSSGSQTER 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS----SATTDLEKAE 183
           + V++GF+ +  N V+ I+   A    +ID    +K +    ++L+        D  +AE
Sbjct: 61  FLVTTGFSEVSNNKVS-ILVDAAEKATEIDVERARKAMERAKERLAMDRGREDVDFLRAE 119

Query: 184 AQI 186
           A +
Sbjct: 120 AAL 122


>gi|148242961|ref|YP_001228118.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. RCC307]
 gi|166222505|sp|A5GV56.1|ATPE_SYNR3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|147851271|emb|CAK28765.1| ATP synthase epsilon chain [Synechococcus sp. RCC307]
          Length = 135

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P  +     + D VI+P++TGQ+GVLPGHV  +  L  GVL + DGN      
Sbjct: 3   LTLRVLCPDQNVFDG-QADEVILPSTTGQLGVLPGHVSLLTALDVGVLRMRDGNQWTAIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
           +  GFA +  + V+ ++   A P   I+    QK L+E  Q  S
Sbjct: 62  LMGGFAEVDDDEVS-VLVNAAEPASGINAEEAQKQLSEAEQAWS 104


>gi|22266800|gb|AAM94914.1|AF522463_9 subunit epsilon [Ilyobacter tartaricus]
          Length = 134

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+M+++  + G MGVL  H P +AEL  G + +   ++   YFVS GF  +       
Sbjct: 18  KEVEMIVLRTTEGDMGVLANHAPFVAELSIGEMKIKSSDEEVSYFVSGGFMDVSREKTT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           I+A EA+   +ID  + +K       KL     D E A  Q       AL  ALT
Sbjct: 77  ILADEAMDAREIDIEIAKKDAEVARAKLKKLKEDREIASTQ------KALQDALT 125


>gi|170596826|ref|XP_001902910.1| ATP synthase delta chain, mitochondrial precursor [Brugia malayi]
 gi|158589119|gb|EDP28244.1| ATP synthase delta chain, mitochondrial precursor, putative [Brugia
           malayi]
          Length = 173

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-K 127
           +L + F  P     +   V  V +    G +G+LP HVP +  LKPGV+ V D +D   +
Sbjct: 38  ELRLTFASPVEVFFNNTVVKQVDISTLNGSIGILPKHVPVLGMLKPGVVRVVDKDDKSIQ 97

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YF SSG   ++ +    ++A EA+ ++ ID +  ++ L+   ++      D  +A  QI 
Sbjct: 98  YFASSGTLSMNPDGSCQVLAEEAIRLEDIDLAKAEEELSSAQRRALEPMEDDARAAVQIE 157

Query: 188 VDVHSAL 194
           ++ + AL
Sbjct: 158 IETYEAL 164


>gi|260432840|ref|ZP_05786811.1| ATP synthase F1, epsilon subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416668|gb|EEX09927.1| ATP synthase F1, epsilon subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 136

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 2/102 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + + +  + V P  S L++ +   V +P + G M  +P H PTI  L+PG+L V     T
Sbjct: 1   MANTMQFDLVSPERS-LASLQASAVQIPGADGDMTAMPDHAPTITTLRPGILKVEAPEGT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
            +Y V+ GFA I+ ++++ ++A +A+P+D++  S + + +AE
Sbjct: 60  SEYLVTGGFAQINGDALS-VLAEKAIPVDEVTRSHLDELIAE 100


>gi|401882771|gb|EJT47015.1| hypothetical protein A1Q1_04258 [Trichosporon asahii var. asahii
           CBS 2479]
 gi|406700577|gb|EKD03743.1| hypothetical protein A1Q2_01969 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 237

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%)

Query: 114 PGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
           P    +HD        VS+GFA +H N+   I AVEA PID+     V+ G++E  + + 
Sbjct: 149 PWRCHIHDLGAFTLTSVSTGFATVHPNNTLTINAVEAYPIDKFSADAVRNGISEAQKVIG 208

Query: 174 SATTDLEKAEAQIGVDVHSALNSAL 198
           S+ ++ EKAEA+I ++V  A+N+AL
Sbjct: 209 SSASEQEKAEARIELEVFEAINAAL 233



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 7/62 (11%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKK 127
           KL ++ V P      ++ V  V +PA+TG MG+L  HVP+I  L+PGV+ V  +G  T K
Sbjct: 34  KLKLSLVSP------SQAVTQVNIPAATGDMGILSNHVPSIEALRPGVVEVIEEGGKTGK 87

Query: 128 YF 129
           YF
Sbjct: 88  YF 89


>gi|289740631|gb|ADD19063.1| mitochondrial F1F0-ATP synthase subunit delta/ATP16 [Glossina
           morsitans morsitans]
          Length = 156

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 3/85 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVA 143
           +V  + VP+ +G  G+L  HVPT+A LKPG++ V  +DG  T KYFVSSG   ++ +S  
Sbjct: 42  DVRQIDVPSFSGSFGILAKHVPTLAVLKPGLVQVIENDGK-TSKYFVSSGTITVNEDSSV 100

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEF 168
            ++A EA  I  ID S  ++ L+++
Sbjct: 101 QVLAEEAHEIKDIDVSEARQLLSKY 125


>gi|323702637|ref|ZP_08114299.1| ATP synthase F1, epsilon subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|323532456|gb|EGB22333.1| ATP synthase F1, epsilon subunit [Desulfotomaculum nigrificans DSM
           574]
          Length = 132

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           ++E+D ++ P + G++G+LP H P +  LK GV+ V       K  VS GF  +  NS  
Sbjct: 18  SEEIDFIVAPGADGELGILPEHAPLVTALKIGVMRVQQDGKFFKVAVSGGFMEVK-NSRV 76

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
            ++A  A   D+ID    +       Q+L+S + +++ A A+I   +H A+N
Sbjct: 77  VVLADTAERADEIDVERARAAKQRAEQRLASKSPEIDVARAEIA--LHKAIN 126


>gi|317969005|ref|ZP_07970395.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. CB0205]
          Length = 136

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           D VI+P++TGQ+G+LPGHV  +  L  GVL V + ND K   +  GFA I A+ V
Sbjct: 20  DEVILPSTTGQLGILPGHVSLLTALDYGVLRVRENNDWKAIALQGGFAEIEADEV 74


>gi|340054344|emb|CCC48640.1| putative ATP synthase, epsilon chain [Trypanosoma vivax Y486]
          Length = 181

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 5/97 (5%)

Query: 71  TVNFVLPYASELSAKE--VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
           ++ F L    E   KE  V  V V  + G+ G+ PGH   I +L P  L+V   DG  T+
Sbjct: 49  SLRFTLTRQDEFILKEETVKCVTVKGTNGEYGIYPGHSYKIVQLVPSPLTVEYADGA-TR 107

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           KYFVS GFA I+     D+  VE  P++ +D +  +K
Sbjct: 108 KYFVSGGFAHINNEGSCDVNTVECAPLEDLDLATAEK 144


>gi|384870652|ref|YP_005753366.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           T0131]
 gi|424786091|ref|ZP_18212884.1| ATP synthase epsilon chain [Staphylococcus aureus CN79]
 gi|329314787|gb|AEB89200.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           T0131]
 gi|421955617|gb|EKU07953.1| ATP synthase epsilon chain [Staphylococcus aureus CN79]
          Length = 134

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L ++ V P  S  +   V++V++  + G++GV+ GH+PT+A LK G + V  HDG  T+ 
Sbjct: 4   LNLDIVTPNGSAYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61

Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             VS GF  +  + V+ I+  A  A  ID ++ + + K  AE + +     TD+ +AE
Sbjct: 62  IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118


>gi|254503990|ref|ZP_05116141.1| ATP synthase F1, epsilon subunit [Labrenzia alexandrii DFL-11]
 gi|222440061|gb|EEE46740.1| ATP synthase F1, epsilon subunit [Labrenzia alexandrii DFL-11]
          Length = 127

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 6/122 (4%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHA 139
           +L +++V  V+VP + G+ GVL  H P ++ +KPG+L V  D     +YFV  GFA I  
Sbjct: 7   QLLSEQVAEVVVPGTEGEFGVLKNHSPFMSTIKPGILKVRTDAGSWDEYFVRGGFADIAP 66

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV----DVHSALN 195
             +  ++A +A+P+ +I    + + +    + ++ A  D  K +A++ +    DV  AL 
Sbjct: 67  GGLT-VLAEQAIPVSEISEDQLAQAIKNAEEDVADAKDDDTKQKAEMTLSQLKDVAEALK 125

Query: 196 SA 197
           +A
Sbjct: 126 AA 127


>gi|118590579|ref|ZP_01547981.1| F0F1 ATP synthase subunit epsilon [Stappia aggregata IAM 12614]
 gi|118437042|gb|EAV43681.1| F0F1 ATP synthase subunit epsilon [Stappia aggregata IAM 12614]
          Length = 135

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 6/122 (4%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHA 139
           +L +++V  V+VP + G+ GVL  H P I+ + PG+L V  +     +YFV  GFA + A
Sbjct: 15  QLLSEQVAEVVVPGAEGEFGVLKNHAPFISTILPGILKVRGEAGGWDEYFVRGGFADVAA 74

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV----DVHSALN 195
             +  ++A +AVP+ +I    + K + +  + ++ A  D  + +A++ +    DV  AL 
Sbjct: 75  GGLT-VLAEQAVPVGEISREQLDKAIQDAQEDVADAKDDASRQKAEMTLAQLKDVVEALK 133

Query: 196 SA 197
            A
Sbjct: 134 KA 135


>gi|114769415|ref|ZP_01447041.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium
           HTCC2255]
 gi|114550332|gb|EAU53213.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium
           HTCC2255]
          Length = 129

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHAN 140
           +L++ E   + +P S G    +  H P +  LKPG+LSV  GND  +Y V+ GF  I + 
Sbjct: 14  KLASLEASEIQIPGSDGDFTAMAEHAPVLTTLKPGLLSVKVGNDLMEYIVTGGFVEI-SG 72

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAE 167
           S A ++A EA+P +++D S+++ GL E
Sbjct: 73  SNASVLAEEALPRNEVDTSVIE-GLIE 98


>gi|296327997|ref|ZP_06870532.1| ATP synthase F1 sector epsilon subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296154953|gb|EFG95735.1| ATP synthase F1 sector epsilon subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 134

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 3/121 (2%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSS 132
           V+    ++  +E   + +  S G +G+LP H P +AEL  G + +   N  ++  YF+S 
Sbjct: 8   VVTQVKKILEQEAGYLRLRTSEGDIGILPNHAPFVAELSMGKMEIESPNKDRRDIYFLSG 67

Query: 133 GFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHS 192
           GF  I  N  A +IA E  PI++ID    Q  +  F ++L   +T+ EK + Q  + +  
Sbjct: 68  GFLEISDNQ-ATVIADEVFPIEKIDVESEQALVENFKKELEKVSTEEEKRKLQKKIKISL 126

Query: 193 A 193
           A
Sbjct: 127 A 127


>gi|86136464|ref|ZP_01055043.1| ATP synthase F1, epsilon subunit [Roseobacter sp. MED193]
 gi|85827338|gb|EAQ47534.1| ATP synthase F1, epsilon subunit [Roseobacter sp. MED193]
          Length = 137

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +  + V P  S L++ +V+ V +P + G M  +P H PTI  L+PGVL V     T ++ 
Sbjct: 5   MQFDLVSPERS-LASLQVNAVQIPGAEGDMTAMPMHAPTITTLRPGVLRVESSQGTSEFV 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V+ GFA I A +++ ++A  A+P+D++  + + + + E      +A  D
Sbjct: 64  VTGGFAEISAEALS-VLAERAIPMDEMTRAHLDELIEEARTMYKTAQDD 111


>gi|444910292|ref|ZP_21230477.1| ATP synthase epsilon chain [Cystobacter fuscus DSM 2262]
 gi|444719229|gb|ELW60026.1| ATP synthase epsilon chain [Cystobacter fuscus DSM 2262]
          Length = 134

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 3/112 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTK 126
           +KLTV  V P    LS  + D  IVP + G  GV PGH P ++ +  G L++  +G  T 
Sbjct: 2   AKLTVEIVTPEKRILSV-QADEAIVPGAKGLFGVRPGHTPFLSLMDAGTLTLKGEGGHTD 60

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
            YFV+ GF  +  + V  ++A  A PI  ID    ++ L+E   +L   ++D
Sbjct: 61  NYFVAGGFVEVTNDKVL-VLADVAEPISGIDVEGARRRLSESMDRLRGLSSD 111


>gi|442324455|ref|YP_007364476.1| F0F1 ATP synthase subunit epsilon [Myxococcus stipitatus DSM 14675]
 gi|441492097|gb|AGC48792.1| F0F1 ATP synthase subunit epsilon [Myxococcus stipitatus DSM 14675]
          Length = 135

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KLTV  V P    LS  + D  +VP   G  GV PGH P ++ ++PG L++ +      
Sbjct: 2   AKLTVEIVTPEKRILSV-QADEAVVPGGKGLFGVRPGHTPFLSLMEPGALTLVEAGKRDA 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           YFV+ GF  + AN    ++A  A  +  ID    +K +AE  ++L   +++
Sbjct: 61  YFVAGGFVEV-ANDKVLVLADAAEHVSGIDVDGARKRMAEAQERLKGLSSE 110


>gi|241888706|ref|ZP_04776013.1| ATP synthase F1, epsilon subunit [Gemella haemolysans ATCC 10379]
 gi|241864729|gb|EER69104.1| ATP synthase F1, epsilon subunit [Gemella haemolysans ATCC 10379]
          Length = 135

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L+V+ V P     SAKE  MV++  ++GQ+GV+  HVP +A LK G L V   +  ++Y 
Sbjct: 4   LSVSIVTPNGEAYSAKEASMVVLGTTSGQLGVMANHVPMVASLKVGPLKVIFPDGREEYL 63

Query: 130 -VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
            VS GF   H   V  I+    +  D ID    ++ L    ++L+     L+   A++ +
Sbjct: 64  AVSEGFVETHKGEVTIIVQTAELGKD-IDVERAKRALQRAEERLAKKEDGLDVRRAELAI 122


>gi|329767907|ref|ZP_08259420.1| ATP synthase F1 [Gemella haemolysans M341]
 gi|328838613|gb|EGF88214.1| ATP synthase F1 [Gemella haemolysans M341]
          Length = 134

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 4/121 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L+V+ V P     SAKE  MV++  ++GQ+GV+  HVP +A LK G L V   +  ++Y 
Sbjct: 4   LSVSIVTPNGEAYSAKEASMVVLGTTSGQVGVMANHVPMVASLKVGPLKVVFPDGREEYL 63

Query: 130 -VSSGFAFIHANSVADIIAVEAVPIDQ-IDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
            VS GF   H   V   I V+   +D+ ID    ++ L    ++L+     L+   A++ 
Sbjct: 64  AVSEGFVETHKGEVT--IIVQTAELDKDIDVERARRALQRAEERLAKKENGLDVRRAELA 121

Query: 188 V 188
           +
Sbjct: 122 L 122


>gi|300024909|ref|YP_003757520.1| ATP synthase F1 subunit epsilon [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526730|gb|ADJ25199.1| ATP synthase F1, epsilon subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 132

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + D V+VP S G+  VL GH P IA L+PGVL V  G   ++ FV SGFA +  + +  +
Sbjct: 20  DADQVVVPGSDGEFAVLAGHAPVIATLRPGVLDVTAGGSKRRLFVKSGFAEVDPSRLT-V 78

Query: 146 IAVEAVPIDQIDPSLV 161
           +A +A  ++++  S +
Sbjct: 79  LAEKAYDVEELSASAI 94


>gi|56697993|ref|YP_168364.1| ATP synthase F0F1 subunit epsilon [Ruegeria pomeroyi DSS-3]
 gi|81676123|sp|Q5LNP2.1|ATPE_SILPO RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|56679730|gb|AAV96396.1| ATP synthase F1, epsilon subunit [Ruegeria pomeroyi DSS-3]
          Length = 136

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ +V  V +P + G M  +P H PTI  L+PGVL V     T +Y V+ GFA I A+S
Sbjct: 16  LASLQVSAVQIPGADGDMTAMPDHAPTITTLRPGVLKVEGPEGTSEYLVTGGFAQIGADS 75

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAE 167
           ++ ++A +A+P+ ++  + + + +AE
Sbjct: 76  LS-VLAEKAIPVTEVTRAHLDELIAE 100


>gi|312073584|ref|XP_003139586.1| ATP synthase subunit delta [Loa loa]
          Length = 174

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-K 127
           +L + F  P     +   V  V +    G +G+LP HVP +  LKPGV+ V D +D   +
Sbjct: 39  ELRLTFASPIEVFFNNAVVKQVDISTLNGSIGILPKHVPVLGMLKPGVVRVVDKDDKSVQ 98

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YF SSG   ++ +    ++A EA+ ++ ID +  ++ L+   ++      D  +A  QI 
Sbjct: 99  YFASSGTLSMNPDGSCQVLAEEAIRLEDIDLAKAEEELSSAQRRALEPMEDDARAVVQIE 158

Query: 188 VDVHSAL 194
           ++ + AL
Sbjct: 159 IETYEAL 165


>gi|307153842|ref|YP_003889226.1| ATP synthase F1 subunit epsilon [Cyanothece sp. PCC 7822]
 gi|306984070|gb|ADN15951.1| ATP synthase F1, epsilon subunit [Cyanothece sp. PCC 7822]
          Length = 138

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E   VI+P++TGQ+G+L GH P +  L  GV+ V    D +   V  GFA I  N V  +
Sbjct: 18  EAQEVILPSTTGQLGILTGHAPLLTALNTGVVRVRPSKDWQAIAVMGGFAEIENNEVKIL 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
           +    V ++ ID    QK  +E   +L  AT   E+
Sbjct: 78  VNAADVGVN-IDKEAAQKEWSEAQSRLDEATRSGER 112


>gi|334342193|ref|YP_004547173.1| ATP synthase F1 subunit epsilon [Desulfotomaculum ruminis DSM 2154]
 gi|334093547|gb|AEG61887.1| ATP synthase F1, epsilon subunit [Desulfotomaculum ruminis DSM
           2154]
          Length = 132

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 3/111 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +E++ ++ P + G++GVLP H P +  LK GV+ V  G    K  VS GF  +  NS   
Sbjct: 19  EEIEFIVAPGAAGELGVLPEHAPLVTALKVGVMRVQQGGKFFKVAVSGGFMEVK-NSRVV 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
           ++A  A   DQI+    ++      Q+L++   +++ A A+I +    ALN
Sbjct: 78  VLADTAERADQINVERAKEAKQRAEQRLAAKNAEIDVARAEIALT--KALN 126


>gi|15925092|ref|NP_372626.1| ATP synthase F0F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927676|ref|NP_375209.1| ATP synthase F0F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus N315]
 gi|21283755|ref|NP_646843.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49484326|ref|YP_041550.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49486895|ref|YP_044116.1| ATP synthase F0F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57652124|ref|YP_186909.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus COL]
 gi|82751703|ref|YP_417444.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus RF122]
 gi|87160314|ref|YP_494703.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196006|ref|YP_500819.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268553|ref|YP_001247496.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394617|ref|YP_001317292.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151222218|ref|YP_001333040.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156980417|ref|YP_001442676.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161510309|ref|YP_001575968.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141621|ref|ZP_03566114.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315770|ref|ZP_04838983.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253731060|ref|ZP_04865225.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733064|ref|ZP_04867229.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006890|ref|ZP_05145491.2| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257426241|ref|ZP_05602656.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428899|ref|ZP_05605293.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431508|ref|ZP_05607881.1| predicted protein [Staphylococcus aureus subsp. aureus 68-397]
 gi|257434217|ref|ZP_05610567.1| predicted protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257437130|ref|ZP_05613170.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M876]
 gi|257793860|ref|ZP_05642839.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9781]
 gi|258407028|ref|ZP_05680178.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9763]
 gi|258422050|ref|ZP_05684967.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9719]
 gi|258422898|ref|ZP_05685798.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9635]
 gi|258433581|ref|ZP_05688654.1| predicted protein [Staphylococcus aureus A9299]
 gi|258440476|ref|ZP_05690646.1| predicted protein [Staphylococcus aureus A8115]
 gi|258445684|ref|ZP_05693862.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6300]
 gi|258450138|ref|ZP_05698233.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6224]
 gi|258453188|ref|ZP_05701179.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5948]
 gi|258453407|ref|ZP_05701389.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5937]
 gi|262049269|ref|ZP_06022144.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus D30]
 gi|262052605|ref|ZP_06024799.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus 930918-3]
 gi|269203738|ref|YP_003283007.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894746|ref|ZP_06302972.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A8117]
 gi|282904771|ref|ZP_06312645.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282906446|ref|ZP_06314297.1| ATP synthase F1 epsilon subunit [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909415|ref|ZP_06317230.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282911667|ref|ZP_06319466.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914951|ref|ZP_06322731.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282917451|ref|ZP_06325204.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus D139]
 gi|282920280|ref|ZP_06328004.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C427]
 gi|282923090|ref|ZP_06330775.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9765]
 gi|282925491|ref|ZP_06333145.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C101]
 gi|282929026|ref|ZP_06336611.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A10102]
 gi|283771270|ref|ZP_06344159.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958882|ref|ZP_06376327.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|284025136|ref|ZP_06379534.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus 132]
 gi|293509019|ref|ZP_06667806.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510934|ref|ZP_06669633.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M809]
 gi|293547536|ref|ZP_06672211.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294850072|ref|ZP_06790809.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|295407032|ref|ZP_06816834.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295428689|ref|ZP_06821315.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296275419|ref|ZP_06857926.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297210077|ref|ZP_06926470.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297246031|ref|ZP_06929888.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297589831|ref|ZP_06948471.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300910440|ref|ZP_07127892.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304379283|ref|ZP_07362022.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|379015228|ref|YP_005291464.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus VC40]
 gi|379021778|ref|YP_005298440.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           M013]
 gi|384548327|ref|YP_005737580.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           ED133]
 gi|384550899|ref|YP_005740151.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|384862754|ref|YP_005745474.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|384865287|ref|YP_005750646.1| ATP synthase F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|384866975|ref|YP_005747171.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|385782342|ref|YP_005758513.1| ATP synthase F1 subunit epsilon [Staphylococcus aureus subsp.
           aureus 11819-97]
 gi|386729792|ref|YP_006196175.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           71193]
 gi|386831684|ref|YP_006238338.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           HO 5096 0412]
 gi|387143817|ref|YP_005732211.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           TW20]
 gi|387151227|ref|YP_005742791.1| ATP synthase epsilon chain [Staphylococcus aureus 04-02981]
 gi|387603381|ref|YP_005734902.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus ST398]
 gi|387781080|ref|YP_005755878.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           LGA251]
 gi|404479383|ref|YP_006710813.1| ATP synthase subunit epsilon [Staphylococcus aureus 08BA02176]
 gi|415684928|ref|ZP_11449957.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|415688378|ref|ZP_11452093.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|415694085|ref|ZP_11455665.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|416841485|ref|ZP_11904440.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O11]
 gi|416847162|ref|ZP_11906971.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O46]
 gi|417650353|ref|ZP_12300125.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21189]
 gi|417651637|ref|ZP_12301397.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21172]
 gi|417655308|ref|ZP_12305021.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21193]
 gi|417795523|ref|ZP_12442743.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21305]
 gi|417799461|ref|ZP_12446601.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21310]
 gi|417802279|ref|ZP_12449344.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21318]
 gi|417887790|ref|ZP_12531910.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21195]
 gi|417891556|ref|ZP_12535618.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21200]
 gi|417893616|ref|ZP_12537641.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21201]
 gi|417897455|ref|ZP_12541386.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21235]
 gi|417898326|ref|ZP_12542247.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21259]
 gi|417900307|ref|ZP_12544197.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21266]
 gi|417905625|ref|ZP_12549433.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21269]
 gi|418277215|ref|ZP_12891829.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21178]
 gi|418283312|ref|ZP_12896063.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21202]
 gi|418286717|ref|ZP_12899358.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21209]
 gi|418308992|ref|ZP_12920572.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21194]
 gi|418311386|ref|ZP_12922911.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21331]
 gi|418314020|ref|ZP_12925502.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21334]
 gi|418315840|ref|ZP_12927292.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21340]
 gi|418319277|ref|ZP_12930661.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21232]
 gi|418320103|ref|ZP_12931467.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus VCU006]
 gi|418425271|ref|ZP_12998365.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|418428163|ref|ZP_13001152.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|418431049|ref|ZP_13003950.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|418434955|ref|ZP_13006806.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|418437722|ref|ZP_13009499.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|418440650|ref|ZP_13012337.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|418443626|ref|ZP_13015212.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|418446622|ref|ZP_13018084.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|418449708|ref|ZP_13021080.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|418452548|ref|ZP_13023870.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|418455503|ref|ZP_13026754.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|418458379|ref|ZP_13029570.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11b]
 gi|418560771|ref|ZP_13125280.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21252]
 gi|418562023|ref|ZP_13126492.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21262]
 gi|418565040|ref|ZP_13129460.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21264]
 gi|418568181|ref|ZP_13132532.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21272]
 gi|418569973|ref|ZP_13134275.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21283]
 gi|418572711|ref|ZP_13136917.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21333]
 gi|418580025|ref|ZP_13144115.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1114]
 gi|418582921|ref|ZP_13146994.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1605]
 gi|418597009|ref|ZP_13160546.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21342]
 gi|418599097|ref|ZP_13162593.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21343]
 gi|418602190|ref|ZP_13165602.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21345]
 gi|418638742|ref|ZP_13201025.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-3]
 gi|418641095|ref|ZP_13203309.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-24]
 gi|418645481|ref|ZP_13207603.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-55]
 gi|418646561|ref|ZP_13208663.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-88]
 gi|418649171|ref|ZP_13211201.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-91]
 gi|418651992|ref|ZP_13213972.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-99]
 gi|418655893|ref|ZP_13217725.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-105]
 gi|418658689|ref|ZP_13220402.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-111]
 gi|418663235|ref|ZP_13224757.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-122]
 gi|418871159|ref|ZP_13425546.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-125]
 gi|418875966|ref|ZP_13430215.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC93]
 gi|418878959|ref|ZP_13433190.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1165]
 gi|418881797|ref|ZP_13436009.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1213]
 gi|418884428|ref|ZP_13438618.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1769]
 gi|418887132|ref|ZP_13441275.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1150]
 gi|418889908|ref|ZP_13444036.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1524]
 gi|418892617|ref|ZP_13446727.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1176]
 gi|418895697|ref|ZP_13449788.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1057]
 gi|418898689|ref|ZP_13452756.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC341D]
 gi|418901490|ref|ZP_13455541.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1214]
 gi|418904441|ref|ZP_13458478.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1770]
 gi|418907034|ref|ZP_13461055.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC345D]
 gi|418909928|ref|ZP_13463918.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG149]
 gi|418912652|ref|ZP_13466629.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG547]
 gi|418915233|ref|ZP_13469200.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC340D]
 gi|418918149|ref|ZP_13472102.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1267]
 gi|418920931|ref|ZP_13474859.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC348]
 gi|418923817|ref|ZP_13477728.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1233]
 gi|418926515|ref|ZP_13480411.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG2018]
 gi|418929445|ref|ZP_13483329.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1612]
 gi|418932420|ref|ZP_13486248.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1750]
 gi|418935083|ref|ZP_13488899.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC128]
 gi|418947899|ref|ZP_13500238.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-157]
 gi|418952191|ref|ZP_13504230.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-160]
 gi|418955747|ref|ZP_13507683.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-189]
 gi|418979381|ref|ZP_13527177.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           DR10]
 gi|418983049|ref|ZP_13530753.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1242]
 gi|418986672|ref|ZP_13534352.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1500]
 gi|418989169|ref|ZP_13536837.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1835]
 gi|418992019|ref|ZP_13539677.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1096]
 gi|418994800|ref|ZP_13542433.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG290]
 gi|419774743|ref|ZP_14300700.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CO-23]
 gi|419783625|ref|ZP_14309409.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-M]
 gi|421150930|ref|ZP_15610581.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. Newbould 305]
 gi|422742990|ref|ZP_16796986.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|422745951|ref|ZP_16799886.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|424771961|ref|ZP_18199077.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CM05]
 gi|440707626|ref|ZP_20888317.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21282]
 gi|440735464|ref|ZP_20915069.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus DSM 20231]
 gi|443636427|ref|ZP_21120537.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21236]
 gi|443638716|ref|ZP_21122750.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21196]
 gi|448742199|ref|ZP_21724151.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/314250]
 gi|448745231|ref|ZP_21727094.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/Y21]
 gi|54036778|sp|P63665.1|ATPE_STAAN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|54036779|sp|P63666.1|ATPE_STAAW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|54040848|sp|P63664.1|ATPE_STAAM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389599|sp|Q6G7K8.1|ATPE_STAAS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389624|sp|Q6GEX3.1|ATPE_STAAR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|81694062|sp|Q5HE98.1|ATPE_STAAC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367789|sp|Q2FF25.1|ATPE_STAA3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367790|sp|Q2FWF1.1|ATPE_STAA8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367791|sp|Q2YUK2.1|ATPE_STAAB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222499|sp|A7X4U2.1|ATPE_STAA1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|172048984|sp|A6QIU6.1|ATPE_STAAE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081381|sp|A6U3I7.1|ATPE_STAA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081382|sp|A5IUP7.1|ATPE_STAA9 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081383|sp|A8Z500.1|ATPE_STAAT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|13701896|dbj|BAB43188.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus N315]
 gi|14247875|dbj|BAB58264.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|21205197|dbj|BAB95891.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49242455|emb|CAG41171.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245338|emb|CAG43813.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286310|gb|AAW38404.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus COL]
 gi|82657234|emb|CAI81675.1| ATP synthase epsilon chain [Staphylococcus aureus RF122]
 gi|87126288|gb|ABD20802.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203564|gb|ABD31374.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|147741622|gb|ABQ49920.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149947069|gb|ABR53005.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150375018|dbj|BAF68278.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|156722552|dbj|BAF78969.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|160369118|gb|ABX30089.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating
           F-type ATPase epsilon subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253725187|gb|EES93916.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728972|gb|EES97701.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257270946|gb|EEV03119.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274241|gb|EEV05758.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257277749|gb|EEV08419.1| predicted protein [Staphylococcus aureus subsp. aureus 68-397]
 gi|257280856|gb|EEV11001.1| predicted protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257283523|gb|EEV13650.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M876]
 gi|257787832|gb|EEV26172.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9781]
 gi|257841361|gb|EEV65805.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9763]
 gi|257841950|gb|EEV66382.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9719]
 gi|257846922|gb|EEV70936.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9635]
 gi|257849312|gb|EEV73291.1| predicted protein [Staphylococcus aureus A9299]
 gi|257852545|gb|EEV76463.1| predicted protein [Staphylococcus aureus A8115]
 gi|257855523|gb|EEV78460.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6300]
 gi|257856612|gb|EEV79518.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A6224]
 gi|257859134|gb|EEV81991.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5948]
 gi|257864388|gb|EEV87134.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A5937]
 gi|259159475|gb|EEW44525.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus 930918-3]
 gi|259162634|gb|EEW47201.1| FoF1-ATP synthase epsilon subunit [Staphylococcus aureus D30]
 gi|262076028|gb|ACY12001.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269941701|emb|CBI50108.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282312892|gb|EFB43293.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316140|gb|EFB46521.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C427]
 gi|282318653|gb|EFB49010.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus D139]
 gi|282321154|gb|EFB51485.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M899]
 gi|282324432|gb|EFB54745.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282326685|gb|EFB56983.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282330396|gb|EFB59914.1| ATP synthase F1 epsilon subunit [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282589332|gb|EFB94424.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A10102]
 gi|282593281|gb|EFB98278.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A9765]
 gi|282594804|gb|EFB99781.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus C160]
 gi|282762834|gb|EFC02968.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus A8117]
 gi|283459475|gb|EFC06568.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           H19]
 gi|283471319|emb|CAQ50530.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus ST398]
 gi|283789600|gb|EFC28423.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|285817766|gb|ADC38253.1| ATP synthase epsilon chain [Staphylococcus aureus 04-02981]
 gi|290919656|gb|EFD96729.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291094723|gb|EFE24995.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466219|gb|EFF08746.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus M809]
 gi|294823020|gb|EFG39452.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|294968057|gb|EFG44084.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295127359|gb|EFG56999.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296885277|gb|EFH24217.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297177030|gb|EFH36285.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297576959|gb|EFH95673.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298695376|gb|ADI98598.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300888282|gb|EFK83473.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302333748|gb|ADL23941.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751983|gb|ADL66160.1| ATP synthase epsilon chain, AtpE [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342142|gb|EFM08042.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312437480|gb|ADQ76551.1| ATP synthase F1 sector epsilon subunit [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|312830454|emb|CBX35296.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315128773|gb|EFT84773.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315193267|gb|EFU23665.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315196964|gb|EFU27306.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140726|gb|EFW32578.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320143702|gb|EFW35479.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323439349|gb|EGA97073.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O11]
 gi|323442442|gb|EGB00071.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus O46]
 gi|329724006|gb|EGG60530.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329726379|gb|EGG62847.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329729260|gb|EGG65668.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21193]
 gi|334270883|gb|EGL89279.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21305]
 gi|334273792|gb|EGL92131.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21310]
 gi|334275024|gb|EGL93326.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21318]
 gi|341839553|gb|EGS81133.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21235]
 gi|341843088|gb|EGS84320.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21269]
 gi|341848686|gb|EGS89846.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21259]
 gi|341848987|gb|EGS90142.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21266]
 gi|341851973|gb|EGS92875.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21200]
 gi|341854012|gb|EGS94886.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21201]
 gi|341857138|gb|EGS97961.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21195]
 gi|344178182|emb|CCC88668.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           LGA251]
 gi|359831087|gb|AEV79065.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           M013]
 gi|364523331|gb|AEW66081.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 11819-97]
 gi|365165930|gb|EHM57678.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21209]
 gi|365167960|gb|EHM59327.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21202]
 gi|365173693|gb|EHM64179.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21178]
 gi|365228419|gb|EHM69603.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus VCU006]
 gi|365234517|gb|EHM75449.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21331]
 gi|365234634|gb|EHM75564.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21334]
 gi|365235994|gb|EHM76899.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21194]
 gi|365241014|gb|EHM81771.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21232]
 gi|365242428|gb|EHM83135.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21340]
 gi|371971193|gb|EHO88600.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21252]
 gi|371974861|gb|EHO92176.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21262]
 gi|371975194|gb|EHO92493.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21264]
 gi|371980449|gb|EHO97657.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21272]
 gi|371984055|gb|EHP01182.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21333]
 gi|371985178|gb|EHP02263.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21283]
 gi|374363925|gb|AEZ38030.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus VC40]
 gi|374395794|gb|EHQ67050.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21342]
 gi|374396744|gb|EHQ67970.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21345]
 gi|374398147|gb|EHQ69337.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21343]
 gi|375019858|gb|EHS13408.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-24]
 gi|375020743|gb|EHS14259.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-3]
 gi|375023000|gb|EHS16466.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-55]
 gi|375023074|gb|EHS16538.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-99]
 gi|375030430|gb|EHS23747.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-91]
 gi|375032718|gb|EHS25944.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-88]
 gi|375034497|gb|EHS27658.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-122]
 gi|375035279|gb|EHS28409.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-105]
 gi|375037820|gb|EHS30828.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-111]
 gi|375369093|gb|EHS72984.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-125]
 gi|375369555|gb|EHS73429.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-160]
 gi|375370472|gb|EHS74277.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-189]
 gi|375374081|gb|EHS77725.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-157]
 gi|377692872|gb|EHT17251.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1165]
 gi|377692995|gb|EHT17372.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1057]
 gi|377693364|gb|EHT17736.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1114]
 gi|377700726|gb|EHT25060.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1214]
 gi|377702569|gb|EHT26890.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1500]
 gi|377702676|gb|EHT26996.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1242]
 gi|377709155|gb|EHT33426.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1605]
 gi|377711502|gb|EHT35733.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1750]
 gi|377713261|gb|EHT37470.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1769]
 gi|377715697|gb|EHT39884.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1835]
 gi|377721159|gb|EHT45300.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG547]
 gi|377721427|gb|EHT45559.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1096]
 gi|377723861|gb|EHT47982.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1150]
 gi|377729620|gb|EHT53710.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1176]
 gi|377729793|gb|EHT53876.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1213]
 gi|377732006|gb|EHT56058.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1233]
 gi|377736637|gb|EHT60652.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1612]
 gi|377739877|gb|EHT63877.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1770]
 gi|377741366|gb|EHT65355.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG2018]
 gi|377741733|gb|EHT65719.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG290]
 gi|377748417|gb|EHT72374.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1267]
 gi|377749891|gb|EHT73830.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG149]
 gi|377751225|gb|EHT75158.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIG1524]
 gi|377754676|gb|EHT78583.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC340D]
 gi|377758248|gb|EHT82134.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC341D]
 gi|377761490|gb|EHT85361.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC345D]
 gi|377762476|gb|EHT86339.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC348]
 gi|377768392|gb|EHT92175.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC93]
 gi|377769185|gb|EHT92961.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CIGC128]
 gi|379992812|gb|EIA14262.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           DR10]
 gi|383364922|gb|EID42227.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-M]
 gi|383971411|gb|EID87486.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CO-23]
 gi|384231085|gb|AFH70332.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           71193]
 gi|385197076|emb|CCG16721.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus HO
           5096 0412]
 gi|387716312|gb|EIK04371.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|387716722|gb|EIK04771.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|387717067|gb|EIK05093.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|387723778|gb|EIK11494.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|387725349|gb|EIK12967.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|387728609|gb|EIK16093.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|387733408|gb|EIK20592.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|387734798|gb|EIK21950.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|387735089|gb|EIK22228.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|387742394|gb|EIK29212.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|387743030|gb|EIK29829.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|387744174|gb|EIK30945.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           VRS11b]
 gi|394329014|gb|EJE55141.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus str. Newbould 305]
 gi|402347548|gb|EJU82575.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus CM05]
 gi|404440872|gb|AFR74065.1| ATP synthase epsilon chain [Staphylococcus aureus 08BA02176]
 gi|436430572|gb|ELP27932.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus subsp.
           aureus DSM 20231]
 gi|436505802|gb|ELP41672.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21282]
 gi|443407806|gb|ELS66344.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21236]
 gi|443408752|gb|ELS67267.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus 21196]
 gi|445547070|gb|ELY15344.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/314250]
 gi|445561502|gb|ELY17704.1| F0F1 ATP synthase subunit epsilon [Staphylococcus aureus KT/Y21]
          Length = 134

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L ++ V P  S  +   V++V++  + G++GV+ GH+PT+A LK G + V  HDG  T+ 
Sbjct: 4   LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61

Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             VS GF  +  + V+ I+  A  A  ID ++ + + K  AE + +     TD+ +AE
Sbjct: 62  IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118


>gi|328545828|ref|YP_004305937.1| ATP synthase subunit epsilon [Polymorphum gilvum SL003B-26A1]
 gi|326415568|gb|ADZ72631.1| ATP synthase epsilon chain [Polymorphum gilvum SL003B-26A1]
          Length = 135

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 6/113 (5%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAV 148
           V+VP + G+ GVL  H P ++ ++PG+L V  DG+   +YFV  GFA + +  +  ++A 
Sbjct: 24  VVVPGTEGEFGVLKDHSPFMSTMRPGLLKVRKDGDKVTEYFVRGGFADVSSAGLT-VLAE 82

Query: 149 EAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV----DVHSALNSA 197
            A+P+++I P  +   +    + L+ A  D  +  A+  +    +V +AL +A
Sbjct: 83  LAIPVEEIKPDDIAAQIRNAEEDLADARDDEARRAAETVLAQLREVQAALKAA 135


>gi|454296417|dbj|BAM85983.1| ATP synthase CF1 epsilon subunit (chloroplast) [Gonium pectorale]
          Length = 142

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG------NDTKKYFVSSGFAFIHA 139
           + D +I+P  TG+MGVL  H P I  L  G + +  G      ++   Y +  GFA +  
Sbjct: 18  QADEIILPTETGEMGVLKNHAPIITGLDVGAMLIRGGQASGSKDEWNSYAIMGGFALVKQ 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           N V  I+A EAV  + I+P        E  +   SA  +LEKAE 
Sbjct: 78  NQVT-ILANEAVSAENINPE-------EAKEAFESAKANLEKAEG 114


>gi|403667944|ref|ZP_10933241.1| F0F1 ATP synthase subunit epsilon [Kurthia sp. JC8E]
          Length = 135

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 67/135 (49%), Gaps = 23/135 (17%)

Query: 72  VNFVLP----YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTK 126
           VN V P    Y SE S     MV V A++G+MG+LPGH+PT+A L  GV+ V    N T+
Sbjct: 6   VNIVTPDGPVYDSEAS-----MVSVRATSGEMGILPGHIPTVAPLAIGVVRVKTPDNKTE 60

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
              VS GF  I A  V  I+   A   D ID +  ++ L    Q++ +          Q 
Sbjct: 61  LVAVSGGFVEIRAEQVT-ILTPSAEVADSIDLARAKEALKRAEQRVQA---------KQE 110

Query: 187 GVDVHSA---LNSAL 198
           G+DV  A   LN A+
Sbjct: 111 GIDVKRAELSLNRAI 125


>gi|341892271|gb|EGT48206.1| hypothetical protein CAEBREN_24996 [Caenorhabditis brenneri]
          Length = 399

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADI 145
           V  V VP   G +GVL  HVPTI  LKPGV+SV     + ++ FVSSG   ++ +    +
Sbjct: 18  VKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTTEGSVQRLFVSSGTLSVNIDGSCQV 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +A E + ++ ID S  +  L E  Q+ S   +++ +AEAQ
Sbjct: 78  LAEEVLKVEDIDESAARAEL-ESAQRASGEGSEVARAEAQ 116


>gi|308175408|ref|YP_003922113.1| ATP synthase subunit epsilon, F1 subunit [Bacillus
           amyloliquefaciens DSM 7]
 gi|384161298|ref|YP_005543371.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           TA208]
 gi|384166202|ref|YP_005547581.1| ATP synthase subunit epsilon, F1 subunit [Bacillus
           amyloliquefaciens LL3]
 gi|384170395|ref|YP_005551773.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens XH7]
 gi|307608272|emb|CBI44643.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555386|gb|AEB25878.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           TA208]
 gi|328913757|gb|AEB65353.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens LL3]
 gi|341829674|gb|AEK90925.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens XH7]
          Length = 132

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A +++MV V A +G +G+LPGH+PT+A LK G + +     T    
Sbjct: 4   VKVNIVTPDGPVYDA-DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTDLAA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDP--SLVQKGLAEFNQKLSSATTDLEKAE 183
           VS GF  +  + V  I+A  A   D ID   +L  K  AE      S  TD+ +AE
Sbjct: 63  VSGGFLEVRPDQVT-ILAQAAETADSIDKERALAAKKRAEDRLNKRSDDTDIRRAE 117


>gi|310778012|ref|YP_003966345.1| ATP synthase F1 subcomplex subunit epsilon [Ilyobacter polytropus
           DSM 2926]
 gi|309747335|gb|ADO81997.1| ATP synthase F1 subcomplex epsilon subunit [Ilyobacter polytropus
           DSM 2926]
          Length = 134

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 9/116 (7%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+M+I+  + G MGVL  H P +AEL  G + +   ++   YFVS GF  I       
Sbjct: 18  KEVEMIILRTTEGDMGVLANHAPFVAELAIGEMKIKSSDEEVAYFVSGGFIDISRERTT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQ-KLSSATTDLEKAEAQIGVDVHSALNSALT 199
           I+A EA+   +ID +  +K  AE  Q KL+    D + A  Q       AL  ALT
Sbjct: 77  ILADEALDAREIDVARAKKD-AEVAQAKLTKLKEDRDIAATQ------KALQDALT 125


>gi|399993671|ref|YP_006573911.1| ATP synthase subunit epsilon [Phaeobacter gallaeciensis DSM 17395 =
           CIP 105210]
 gi|400755174|ref|YP_006563542.1| ATP synthase subunit epsilon [Phaeobacter gallaeciensis 2.10]
 gi|398654327|gb|AFO88297.1| ATP synthase epsilon chain [Phaeobacter gallaeciensis 2.10]
 gi|398658226|gb|AFO92192.1| ATP synthase epsilon chain [Phaeobacter gallaeciensis DSM 17395 =
           CIP 105210]
          Length = 137

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++  V  V++P + G M  +  H PTI  L+PGVL V     T +Y V+ GFA I A+ 
Sbjct: 16  LASLPVTAVMIPGAEGDMTAMANHAPTITTLRPGVLRVESPQGTSEYLVTGGFAEIGADG 75

Query: 142 VADIIAVEAVPIDQI 156
           ++ ++A +A+P+DQ+
Sbjct: 76  LS-VLAEKAIPMDQL 89


>gi|393910030|gb|EFO24487.2| ATP synthase subunit delta [Loa loa]
          Length = 227

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 4/111 (3%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHANSVA 143
           K+VD   +    G +G+LP HVP +  LKPGV+ V D +D   +YF SSG   ++ +   
Sbjct: 111 KQVD---ISTLNGSIGILPKHVPVLGMLKPGVVRVVDKDDKSVQYFASSGTLSMNPDGSC 167

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
            ++A EA+ ++ ID +  ++ L+   ++      D  +A  QI ++ + AL
Sbjct: 168 QVLAEEAIRLEDIDLAKAEEELSSAQRRALEPMEDDARAVVQIEIETYEAL 218


>gi|301056771|ref|YP_003794982.1| ATP synthase subunit E [Bacillus cereus biovar anthracis str. CI]
 gi|423554242|ref|ZP_17530568.1| ATP synthase epsilon chain [Bacillus cereus ISP3191]
 gi|300378940|gb|ADK07844.1| ATP synthase subunit E [Bacillus cereus biovar anthracis str. CI]
 gi|401181381|gb|EJQ88532.1| ATP synthase epsilon chain [Bacillus cereus ISP3191]
          Length = 133

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGQTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q+L    A  D ++AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHVDFKRAE 117


>gi|221202176|ref|ZP_03575211.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2M]
 gi|221208763|ref|ZP_03581762.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2]
 gi|221171395|gb|EEE03843.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2]
 gi|221177970|gb|EEE10382.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD2M]
          Length = 180

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 2/146 (1%)

Query: 41  KVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMG 100
           + + N  PP+  S     R    T +        V+    ++ + E   V +P  TG++G
Sbjct: 13  RASANAGPPRHRSDVAPKRSHRSTGVDMATIKVDVVSAEEQIFSGEAKFVALPGETGELG 72

Query: 101 VLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPS 159
           +LPGH P I  ++PG + +  +G   +  FV+ G   +   +V  ++A  A+    +D +
Sbjct: 73  ILPGHTPLITRIRPGAVRIEVEGGSDEFVFVAGGILEVQPGAVT-VLADTAIRGKDLDAA 131

Query: 160 LVQKGLAEFNQKLSSATTDLEKAEAQ 185
             ++      + L +A +DL+ A+AQ
Sbjct: 132 KAEEARKRAEETLQNAKSDLDLAKAQ 157


>gi|90994451|ref|YP_536941.1| ATP synthase CF1 epsilon subunit [Pyropia yezoensis]
 gi|122238240|sp|Q1XDM7.1|ATPE_PORYE RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|90819015|dbj|BAE92384.1| ATP synthase CF1 epsilon chain [Pyropia yezoensis]
          Length = 134

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 2/115 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  + P  +   A E   +I+P+STGQ+G+L GH P +  L  GV+ V    +     
Sbjct: 3   LNIRIIAPDRTVWDA-EAQEIILPSSTGQLGILTGHAPLLTALDIGVMRVRVDKEWMPIV 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +  GFA I  N +  I+   A    QID S  +K L    Q LS A+++ EK EA
Sbjct: 62  LLGGFAEIENNQLT-ILVNGAEEASQIDLSEAEKNLDTATQLLSDASSNKEKIEA 115


>gi|383459462|ref|YP_005373451.1| F0F1 ATP synthase subunit epsilon [Corallococcus coralloides DSM
           2259]
 gi|380732147|gb|AFE08149.1| F0F1 ATP synthase subunit epsilon [Corallococcus coralloides DSM
           2259]
          Length = 134

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 6/122 (4%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KLTV  V P    LS  + D  IVP   G  GV PGH P ++ ++PG L++ +     +
Sbjct: 2   AKLTVEIVTPEKRILSV-QADEAIVPGGEGLFGVRPGHTPFLSLVEPGTLTLIEAGKQDR 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           YFV+ GF  +  + V  ++A  A  ++ ID +  ++ + E   +L     DL  A+A+  
Sbjct: 61  YFVAGGFVEVSNDKVL-VLADAAEHVNGIDVAGARRRMEEAQARLK----DLNAADARYA 115

Query: 188 VD 189
           ++
Sbjct: 116 LE 117


>gi|212703957|ref|ZP_03312085.1| hypothetical protein DESPIG_02010 [Desulfovibrio piger ATCC 29098]
 gi|212672660|gb|EEB33143.1| ATP synthase F1, epsilon subunit [Desulfovibrio piger ATCC 29098]
          Length = 133

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 2/118 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S L +  V P  + +SA +V+M + P   G+ GVLP HV  ++ LK G L   +G     
Sbjct: 2   SMLQLEVVTPDKTVVSA-QVEMAVCPGVMGEFGVLPHHVSLLSALKIGNLRYTEGGKQHN 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            F+S GFA ++ N V  ++A  A   + ID +  Q       ++L+S   D++ A A+
Sbjct: 61  VFISGGFADVN-NKVLTVLAESAELAEDIDTARAQAAKERAEKRLASQADDVDHARAE 117


>gi|237833931|ref|XP_002366263.1| ATP synthase, putative [Toxoplasma gondii ME49]
 gi|211963927|gb|EEA99122.1| ATP synthase, putative [Toxoplasma gondii ME49]
 gi|221508253|gb|EEE33840.1| ATP synthase, putative [Toxoplasma gondii VEG]
          Length = 183

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD---GNDTKKYFVSSGFAFIH----- 138
           V  V VP S G M +  GH  T+A LK G + V     G++ +++F+S GF         
Sbjct: 62  VRSVTVPGSEGAMTMTNGHSQTVARLKAGEIIVRKGETGDEVERFFLSDGFVLFKSPEDD 121

Query: 139 -ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
                A+++ VE VP+  +D       L E  Q+ + AT +  KA   +G ++ S++
Sbjct: 122 SGCCTAEVLGVEVVPVSMLDKESAATALQELLQQGAGATDEWTKARTLLGQELLSSV 178


>gi|296446168|ref|ZP_06888116.1| ATP synthase F1, epsilon subunit [Methylosinus trichosporium OB3b]
 gi|296256362|gb|EFH03441.1| ATP synthase F1, epsilon subunit [Methylosinus trichosporium OB3b]
          Length = 132

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 1/117 (0%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L A EV+ V+ P + GQ  VL  H P +  LKPGV+ + D     + FV  GFA +  + 
Sbjct: 15  LFAGEVEAVVAPGADGQFTVLKDHAPLMTVLKPGVVEIDDAGKKDRLFVRGGFADVGLSG 74

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
              I+A  A+P+ ++D + +   +    + ++ A TD  +  A   +D    L +AL
Sbjct: 75  FT-ILAEYAIPVAELDAAKIDADIKNAGEDVADAKTDEARRLAAEKLDQLKELKAAL 130


>gi|148699643|gb|EDL31590.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_a [Mus musculus]
          Length = 137

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 112 LKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           L+PG++ VH  DG  T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +  
Sbjct: 49  LRPGLVVVHTEDGT-TTKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQ 107

Query: 170 QKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +LS A  +  +AE QI ++ + AL  AL
Sbjct: 108 SELSGAADEAARAEIQIRIEANEALVKAL 136


>gi|418055485|ref|ZP_12693540.1| ATP synthase epsilon chain [Hyphomicrobium denitrificans 1NES1]
 gi|353211067|gb|EHB76468.1| ATP synthase epsilon chain [Hyphomicrobium denitrificans 1NES1]
          Length = 132

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFA 135
           + D V+VP S G+  VL GH P IA L+PGVL V  G   ++ FV SGFA
Sbjct: 20  DADQVVVPGSDGEFAVLAGHAPVIATLRPGVLDVTAGGSKRRLFVKSGFA 69


>gi|254476265|ref|ZP_05089651.1| ATP synthase F1, epsilon subunit [Ruegeria sp. R11]
 gi|214030508|gb|EEB71343.1| ATP synthase F1, epsilon subunit [Ruegeria sp. R11]
          Length = 137

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++  V  V++P + G M  +  H PTI  L+PGVL V     T +Y V+ GFA I A+ 
Sbjct: 16  LASLPVTAVMIPGAEGDMTAMANHAPTITTLRPGVLRVESPEGTSEYLVTGGFAEIGADG 75

Query: 142 VADIIAVEAVPIDQI 156
           ++ ++A +A+P+DQ+
Sbjct: 76  LS-VLAEKAIPMDQM 89


>gi|365155836|ref|ZP_09352184.1| ATP synthase epsilon chain [Bacillus smithii 7_3_47FAA]
 gi|363627982|gb|EHL78809.1| ATP synthase epsilon chain [Bacillus smithii 7_3_47FAA]
          Length = 131

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E +MV   A++G++G+LPGH+P +A L+ G + + +GN T+   VS GF  +  + V  I
Sbjct: 19  EAEMVSTRATSGELGILPGHIPLVAPLEIGAVRLKNGNKTQWIAVSGGFLEVRPDRVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           +A  A   + ID    Q       ++L     D ++AE
Sbjct: 78  LAQAAERAEDIDIERAQAAKERAERRLRQENMDNKRAE 115


>gi|30023336|ref|NP_834967.1| ATP synthase F0F1 subunit epsilon [Bacillus cereus ATCC 14579]
 gi|42784474|ref|NP_981721.1| ATP synthase F0F1 subunit epsilon [Bacillus cereus ATCC 10987]
 gi|47569799|ref|ZP_00240470.1| ATP synthase F1, epsilon subunit [Bacillus cereus G9241]
 gi|49481142|ref|YP_039295.1| ATP synthase F0F1 subunit epsilon [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140256|ref|YP_086573.1| ATP synthase F0F1 subunit epsilon [Bacillus cereus E33L]
 gi|118480343|ref|YP_897494.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis str. Al
           Hakam]
 gi|196045606|ref|ZP_03112836.1| ATP synthase F1, epsilon subunit [Bacillus cereus 03BB108]
 gi|206970248|ref|ZP_03231201.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1134]
 gi|206976887|ref|ZP_03237789.1| ATP synthase F1, epsilon subunit [Bacillus cereus H3081.97]
 gi|217962792|ref|YP_002341370.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus AH187]
 gi|218231931|ref|YP_002370079.1| ATP synthase F0F1 subunit epsilon [Bacillus cereus B4264]
 gi|222098775|ref|YP_002532833.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus Q1]
 gi|225867281|ref|YP_002752659.1| ATP synthase F1, epsilon subunit [Bacillus cereus 03BB102]
 gi|228917913|ref|ZP_04081449.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228924039|ref|ZP_04087315.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955551|ref|ZP_04117554.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961568|ref|ZP_04123177.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229050975|ref|ZP_04194524.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH676]
 gi|229072771|ref|ZP_04205970.1| ATP synthase F1, epsilon subunit [Bacillus cereus F65185]
 gi|229082518|ref|ZP_04214981.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock4-2]
 gi|229094414|ref|ZP_04225486.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock3-42]
 gi|229112718|ref|ZP_04242251.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock1-15]
 gi|229130554|ref|ZP_04259510.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-Cer4]
 gi|229142045|ref|ZP_04270570.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-ST26]
 gi|229147845|ref|ZP_04276186.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-ST24]
 gi|229153467|ref|ZP_04281645.1| ATP synthase F1, epsilon subunit [Bacillus cereus m1550]
 gi|229158865|ref|ZP_04286922.1| ATP synthase F1, epsilon subunit [Bacillus cereus ATCC 4342]
 gi|229181551|ref|ZP_04308877.1| ATP synthase F1, epsilon subunit [Bacillus cereus 172560W]
 gi|229187530|ref|ZP_04314670.1| ATP synthase F1, epsilon subunit [Bacillus cereus BGSC 6E1]
 gi|229193556|ref|ZP_04320500.1| ATP synthase F1, epsilon subunit [Bacillus cereus ATCC 10876]
 gi|229199428|ref|ZP_04326091.1| ATP synthase F1, epsilon subunit [Bacillus cereus m1293]
 gi|296505732|ref|YP_003667432.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis BMB171]
 gi|300117814|ref|ZP_07055581.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus SJ1]
 gi|365162739|ref|ZP_09358863.1| ATP synthase epsilon chain [Bacillus sp. 7_6_55CFAA_CT2]
 gi|375287327|ref|YP_005107766.1| ATP synthase F1 subunit epsilon [Bacillus cereus NC7401]
 gi|376269214|ref|YP_005121926.1| ATP synthase subunit epsilon [Bacillus cereus F837/76]
 gi|384183168|ref|YP_005568930.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis serovar
           finitimus YBT-020]
 gi|402554606|ref|YP_006595877.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus FRI-35]
 gi|423355786|ref|ZP_17333410.1| ATP synthase epsilon chain [Bacillus cereus IS075]
 gi|423375142|ref|ZP_17352479.1| ATP synthase epsilon chain [Bacillus cereus AND1407]
 gi|423410947|ref|ZP_17388067.1| ATP synthase epsilon chain [Bacillus cereus BAG3O-2]
 gi|423427394|ref|ZP_17404425.1| ATP synthase epsilon chain [Bacillus cereus BAG3X2-2]
 gi|423433268|ref|ZP_17410272.1| ATP synthase epsilon chain [Bacillus cereus BAG4O-1]
 gi|423438708|ref|ZP_17415689.1| ATP synthase epsilon chain [Bacillus cereus BAG4X12-1]
 gi|423506813|ref|ZP_17483402.1| ATP synthase epsilon chain [Bacillus cereus HD73]
 gi|423571902|ref|ZP_17548139.1| ATP synthase epsilon chain [Bacillus cereus MSX-A12]
 gi|423573044|ref|ZP_17549163.1| ATP synthase epsilon chain [Bacillus cereus MSX-D12]
 gi|423583475|ref|ZP_17559586.1| ATP synthase epsilon chain [Bacillus cereus VD014]
 gi|423589125|ref|ZP_17565211.1| ATP synthase epsilon chain [Bacillus cereus VD045]
 gi|423608353|ref|ZP_17584245.1| ATP synthase epsilon chain [Bacillus cereus VD102]
 gi|423632623|ref|ZP_17608368.1| ATP synthase epsilon chain [Bacillus cereus VD154]
 gi|423633851|ref|ZP_17609504.1| ATP synthase epsilon chain [Bacillus cereus VD156]
 gi|423644466|ref|ZP_17620083.1| ATP synthase epsilon chain [Bacillus cereus VD166]
 gi|423651145|ref|ZP_17626715.1| ATP synthase epsilon chain [Bacillus cereus VD169]
 gi|423658217|ref|ZP_17633516.1| ATP synthase epsilon chain [Bacillus cereus VD200]
 gi|449092368|ref|YP_007424809.1| ATP synthase F0F1 subunit epsilon [Bacillus thuringiensis serovar
           kurstaki str. HD73]
 gi|60389514|sp|Q630U4.1|ATPE_BACCZ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389642|sp|Q6HAY1.1|ATPE_BACHK RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389685|sp|Q72XE9.1|ATPE_BACC1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389751|sp|Q814W3.1|ATPE_BACCR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222433|sp|A0RL94.1|ATPE_BACAH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740223|sp|B7HFK0.1|ATPE_BACC4 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740224|sp|B7HY63.1|ATPE_BACC7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809346|sp|C1F0M7.1|ATPE_BACC3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809347|sp|B9IRT6.1|ATPE_BACCQ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|29898897|gb|AAP12168.1| ATP synthase epsilon chain [Bacillus cereus ATCC 14579]
 gi|42740406|gb|AAS44329.1| ATP synthase F1, epsilon subunit [Bacillus cereus ATCC 10987]
 gi|47553541|gb|EAL11921.1| ATP synthase F1, epsilon subunit [Bacillus cereus G9241]
 gi|49332698|gb|AAT63344.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973725|gb|AAU15275.1| ATP synthase F1, epsilon subunit [Bacillus cereus E33L]
 gi|118419568|gb|ABK87987.1| ATP synthase F1 subcomplex epsilon subunit [Bacillus thuringiensis
           str. Al Hakam]
 gi|196023437|gb|EDX62114.1| ATP synthase F1, epsilon subunit [Bacillus cereus 03BB108]
 gi|206734825|gb|EDZ51994.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1134]
 gi|206744853|gb|EDZ56258.1| ATP synthase F1, epsilon subunit [Bacillus cereus H3081.97]
 gi|217065809|gb|ACJ80059.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH187]
 gi|218159888|gb|ACK59880.1| ATP synthase F1, epsilon subunit [Bacillus cereus B4264]
 gi|221242834|gb|ACM15544.1| ATP synthase F1, epsilon subunit [Bacillus cereus Q1]
 gi|225787771|gb|ACO27988.1| ATP synthase F1, epsilon subunit [Bacillus cereus 03BB102]
 gi|228584004|gb|EEK42159.1| ATP synthase F1, epsilon subunit [Bacillus cereus m1293]
 gi|228589861|gb|EEK47736.1| ATP synthase F1, epsilon subunit [Bacillus cereus ATCC 10876]
 gi|228595897|gb|EEK53577.1| ATP synthase F1, epsilon subunit [Bacillus cereus BGSC 6E1]
 gi|228601919|gb|EEK59414.1| ATP synthase F1, epsilon subunit [Bacillus cereus 172560W]
 gi|228624476|gb|EEK81246.1| ATP synthase F1, epsilon subunit [Bacillus cereus ATCC 4342]
 gi|228630071|gb|EEK86722.1| ATP synthase F1, epsilon subunit [Bacillus cereus m1550]
 gi|228635495|gb|EEK91984.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-ST24]
 gi|228641334|gb|EEK97640.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-ST26]
 gi|228652893|gb|EEL08775.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-Cer4]
 gi|228670699|gb|EEL26010.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock1-15]
 gi|228688951|gb|EEL42778.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock3-42]
 gi|228700950|gb|EEL53473.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock4-2]
 gi|228710262|gb|EEL62237.1| ATP synthase F1, epsilon subunit [Bacillus cereus F65185]
 gi|228722352|gb|EEL73748.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH676]
 gi|228798050|gb|EEM45054.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804113|gb|EEM50729.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228835529|gb|EEM80894.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228841710|gb|EEM86821.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|296326784|gb|ADH09712.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis BMB171]
 gi|298724678|gb|EFI65353.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus SJ1]
 gi|324329252|gb|ADY24512.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis serovar
           finitimus YBT-020]
 gi|358355854|dbj|BAL21026.1| ATP synthase F1, epsilon subunit [Bacillus cereus NC7401]
 gi|363617467|gb|EHL68854.1| ATP synthase epsilon chain [Bacillus sp. 7_6_55CFAA_CT2]
 gi|364515014|gb|AEW58413.1| ATP synthase epsilon chain [Bacillus cereus F837/76]
 gi|401081811|gb|EJP90084.1| ATP synthase epsilon chain [Bacillus cereus IS075]
 gi|401093019|gb|EJQ01140.1| ATP synthase epsilon chain [Bacillus cereus AND1407]
 gi|401108733|gb|EJQ16663.1| ATP synthase epsilon chain [Bacillus cereus BAG3X2-2]
 gi|401109285|gb|EJQ17211.1| ATP synthase epsilon chain [Bacillus cereus BAG3O-2]
 gi|401112319|gb|EJQ20198.1| ATP synthase epsilon chain [Bacillus cereus BAG4O-1]
 gi|401115835|gb|EJQ23681.1| ATP synthase epsilon chain [Bacillus cereus BAG4X12-1]
 gi|401199326|gb|EJR06230.1| ATP synthase epsilon chain [Bacillus cereus MSX-A12]
 gi|401209535|gb|EJR16294.1| ATP synthase epsilon chain [Bacillus cereus VD014]
 gi|401215442|gb|EJR22158.1| ATP synthase epsilon chain [Bacillus cereus MSX-D12]
 gi|401224364|gb|EJR30918.1| ATP synthase epsilon chain [Bacillus cereus VD045]
 gi|401238362|gb|EJR44803.1| ATP synthase epsilon chain [Bacillus cereus VD102]
 gi|401259269|gb|EJR65445.1| ATP synthase epsilon chain [Bacillus cereus VD154]
 gi|401270590|gb|EJR76610.1| ATP synthase epsilon chain [Bacillus cereus VD166]
 gi|401279423|gb|EJR85349.1| ATP synthase epsilon chain [Bacillus cereus VD169]
 gi|401282358|gb|EJR88260.1| ATP synthase epsilon chain [Bacillus cereus VD156]
 gi|401288170|gb|EJR93928.1| ATP synthase epsilon chain [Bacillus cereus VD200]
 gi|401795816|gb|AFQ09675.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus FRI-35]
 gi|402446311|gb|EJV78173.1| ATP synthase epsilon chain [Bacillus cereus HD73]
 gi|449026125|gb|AGE81288.1| ATP synthase F0F1 subunit epsilon [Bacillus thuringiensis serovar
           kurstaki str. HD73]
          Length = 133

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q+L    A  D ++AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHVDFKRAE 117


>gi|32476318|ref|NP_869312.1| ATP synthase CF1 subunit e [Rhodopirellula baltica SH 1]
 gi|417303505|ref|ZP_12090559.1| ATP synthase F1, epsilon subunit [Rhodopirellula baltica WH47]
 gi|421613923|ref|ZP_16054992.1| ATP synthase F1, epsilon subunit [Rhodopirellula baltica SH28]
 gi|440714566|ref|ZP_20895145.1| ATP synthase F1, epsilon subunit [Rhodopirellula baltica SWK14]
 gi|449136390|ref|ZP_21771778.1| ATP synthase F1, epsilon subunit [Rhodopirellula europaea 6C]
 gi|60389731|sp|Q7UFB4.1|ATPE_RHOBA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|32446863|emb|CAD78769.1| probable ATP synthase CF1 subunit e [Rhodopirellula baltica SH 1]
 gi|327540208|gb|EGF26798.1| ATP synthase F1, epsilon subunit [Rhodopirellula baltica WH47]
 gi|408495130|gb|EKJ99719.1| ATP synthase F1, epsilon subunit [Rhodopirellula baltica SH28]
 gi|436440762|gb|ELP34066.1| ATP synthase F1, epsilon subunit [Rhodopirellula baltica SWK14]
 gi|448885010|gb|EMB15474.1| ATP synthase F1, epsilon subunit [Rhodopirellula europaea 6C]
          Length = 128

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V P  +EL  +E D V +P   G++GV  G  P I  L  GVL +   +  ++YFV  GF
Sbjct: 8   VTPERTELD-READFVALPMFDGELGVQRGRAPMIGRLGYGVLRLQTVSGPERYFVDGGF 66

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
           A +  + V +++   A+P+D +D     K LAE
Sbjct: 67  AQVE-DDVVNVLTGRAIPVDLLDNDEATKTLAE 98


>gi|89053541|ref|YP_508992.1| ATP synthase F1 subunit epsilon [Jannaschia sp. CCS1]
 gi|119367738|sp|Q28TJ5.1|ATPE_JANSC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|88863090|gb|ABD53967.1| ATP synthase F1 subcomplex epsilon subunit [Jannaschia sp. CCS1]
          Length = 132

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ EV  V +P + G +  +P H P I  L+PGVL V      K YFV+ GFA I A  
Sbjct: 15  LASMEVTEVQIPGADGDLTAMPDHSPMITTLRPGVLKVSGAEGEKSYFVTGGFADI-AGP 73

Query: 142 VADIIAVEAVPIDQIDPSLVQK 163
            A I+A  A+P++++   +V++
Sbjct: 74  SATILAERAMPVEEVTGEIVEE 95


>gi|321313230|ref|YP_004205517.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis BSn5]
 gi|384177326|ref|YP_005558711.1| ATP synthase F1, epsilon subunit [Bacillus subtilis subsp. subtilis
           str. RO-NN-1]
 gi|386760332|ref|YP_006233549.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. JS]
 gi|428281306|ref|YP_005563041.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp. natto
           BEST195]
 gi|430756523|ref|YP_007207802.1| ATP synthase subunit epsilon [Bacillus subtilis subsp. subtilis
           str. BSP1]
 gi|291486263|dbj|BAI87338.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019504|gb|ADV94490.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis BSn5]
 gi|349596550|gb|AEP92737.1| ATP synthase F1, epsilon subunit [Bacillus subtilis subsp. subtilis
           str. RO-NN-1]
 gi|384933615|gb|AFI30293.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. JS]
 gi|430021043|gb|AGA21649.1| ATP synthase epsilon chain [Bacillus subtilis subsp. subtilis str.
           BSP1]
          Length = 132

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A +++MV V A +G +G+LPGH+PT+A LK G + +     T+   
Sbjct: 4   VKVNIVTPDGPVYDA-DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEMVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
           VS GF  +  + V  I+A  A   + ID    +       ++L+S +  TD+ +AE
Sbjct: 63  VSGGFVEVRPDQVT-ILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAE 117


>gi|307942825|ref|ZP_07658170.1| ATP synthase F1, epsilon subunit [Roseibium sp. TrichSKD4]
 gi|307773621|gb|EFO32837.1| ATP synthase F1, epsilon subunit [Roseibium sp. TrichSKD4]
          Length = 135

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++EV  V+VP + G+ GVL  H P ++ +KPG+L V  DGN   +YFV  GFA    N
Sbjct: 16  LLSEEVLEVVVPGTDGEFGVLKHHSPFMSTIKPGILKVRKDGNAWVEYFVRGGFADAGPN 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            +  ++A  A P+ +I          + NQ++ +A  D+  A+
Sbjct: 76  GLT-VLAERATPVSEISAD-------DLNQQIKNAEEDVADAK 110


>gi|338998413|ref|ZP_08637087.1| F0F1 ATP synthase subunit epsilon [Halomonas sp. TD01]
 gi|338764730|gb|EGP19688.1| F0F1 ATP synthase subunit epsilon [Halomonas sp. TD01]
          Length = 142

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGND 124
           + +  T N V   AS  S   V+ V+     G +G+LPGH P + EL+PG +  +HDG  
Sbjct: 1   MANSFTCNIVSAEASIFSGS-VEQVVASGIMGDLGILPGHAPLLTELQPGPIRVIHDGGQ 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLV----QKGLAEFNQK 171
            + +FVS GF  +  + V  I+A  A     +D +      Q+ L  FN+K
Sbjct: 60  EENFFVSGGFMEVQPD-VVTILADAAARASDLDEAAAEEARQQALKAFNEK 109


>gi|71082934|ref|YP_265653.1| ATP synthase F1 subunit epsilon [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762642|ref|ZP_01264607.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|119367754|sp|Q4FP39.1|ATPE_PELUB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|71062047|gb|AAZ21050.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718444|gb|EAS85094.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 130

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 8/134 (5%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  +  +  V P  S LS ++V  V+VPA  G+MG+L  H+  I+ LKPG++ +   +  
Sbjct: 1   MSEEFKIEIVNPEKSFLSKEDVTEVVVPAFEGEMGILKDHISIISFLKPGIIKIFSKSGE 60

Query: 126 KKYFVSSGFAFIHANSV----ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
             Y+V  G      N++    + I  ++ +  D+I   L Q   AE N K +S  TD  K
Sbjct: 61  DNYYVEDGIVEFKNNNLSVLTSSIFNIKDIDKDKISELLTQ---AEENSK-NSDITDQNK 116

Query: 182 AEAQIGVDVHSALN 195
                 +DV   LN
Sbjct: 117 YLVDQKIDVLKTLN 130


>gi|319997196|gb|ADV91192.1| mitochondrial ATP synthase F1 delta subunit [Karlodinium micrum]
          Length = 154

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND 124
            + ++L +    P       K VD V VP + G   V   H   +++LK GV++V DG +
Sbjct: 16  GVTNRLLLTLASPGECVYLKKPVDSVTVPGTEGTFTVTNNHSLIVSQLKAGVITVTDGPE 75

Query: 125 TKKYFVSSGFAFIH------ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
            K YFVS GF F +          A++ AVE VP   +D     + L+E     +   T+
Sbjct: 76  KKDYFVSDGFLFFNHPTDGSGCCTAEVSAVECVPTSALDKDRAAQVLSEV--LAAPKDTE 133

Query: 179 LEKAEAQIG 187
            ++ ++Q+G
Sbjct: 134 WDRVKSQLG 142


>gi|425738315|ref|ZP_18856580.1| F0F1 ATP synthase subunit epsilon [Staphylococcus massiliensis S46]
 gi|425479988|gb|EKU47158.1| F0F1 ATP synthase subunit epsilon [Staphylococcus massiliensis S46]
          Length = 134

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  V P  S    + V++ ++  + G+MGV+ GH+PT+  L+ G + V+  ND+    
Sbjct: 4   LTLEIVTPNGSVYQKENVELAVLQTTAGEMGVMHGHIPTVTPLRVGHIKVNFDNDSDFIA 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAE 183
           V+ GFA I  + V +I+   A   D+ID    +  K  A F      A TD+ +A+
Sbjct: 64  VTEGFAEIRRDKV-NILVQTAETADEIDVERAKSAKQRATFYLDGDKADTDINRAQ 118


>gi|126461744|ref|YP_001042858.1| F0F1 ATP synthase subunit epsilon [Rhodobacter sphaeroides ATCC
           17029]
 gi|221638721|ref|YP_002524983.1| F0F1 ATP synthase subunit epsilon [Rhodobacter sphaeroides KD131]
 gi|332557742|ref|ZP_08412064.1| F0F1 ATP synthase subunit epsilon [Rhodobacter sphaeroides WS8N]
 gi|429208590|ref|ZP_19199837.1| ATP synthase epsilon chain [Rhodobacter sp. AKP1]
 gi|126103408|gb|ABN76086.1| ATP synthase F1, epsilon subunit [Rhodobacter sphaeroides ATCC
           17029]
 gi|221159502|gb|ACM00482.1| ATP synthase epsilon chain 1 [Rhodobacter sphaeroides KD131]
 gi|332275454|gb|EGJ20769.1| F0F1 ATP synthase subunit epsilon [Rhodobacter sphaeroides WS8N]
 gi|428188353|gb|EKX56918.1| ATP synthase epsilon chain [Rhodobacter sp. AKP1]
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           V VP + G M  + GH PTI  L+PG+L  H  +  + Y V+ GFA I+A S++ ++A +
Sbjct: 24  VQVPGTDGDMTAMEGHAPTITTLRPGILRAHGPSGVQAYAVTGGFAEINATSIS-VLAEK 82

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSA 175
           AV ++++  +++ + +AE  +  S A
Sbjct: 83  AVAVEELTGTVLDEFIAEARELASVA 108


>gi|423484668|ref|ZP_17461357.1| ATP synthase epsilon chain [Bacillus cereus BAG6X1-2]
 gi|423597438|ref|ZP_17573438.1| ATP synthase epsilon chain [Bacillus cereus VD078]
 gi|401138129|gb|EJQ45704.1| ATP synthase epsilon chain [Bacillus cereus BAG6X1-2]
 gi|401238970|gb|EJR45402.1| ATP synthase epsilon chain [Bacillus cereus VD078]
          Length = 133

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           I++  A   + ID     +      Q++    A  D  +AE
Sbjct: 77  ILSSSAEEANHIDIHRANESKRRAEQRMQDKQAHVDFRRAE 117


>gi|95929970|ref|ZP_01312710.1| ATP synthase F1, epsilon subunit [Desulfuromonas acetoxidans DSM
           684]
 gi|95133939|gb|EAT15598.1| ATP synthase F1, epsilon subunit [Desulfuromonas acetoxidans DSM
           684]
          Length = 137

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  V PY   LS +EVD +I P + G++G+LPGH P +  LK G L+   G       
Sbjct: 5   LKLEMVTPYKRVLS-EEVDEIIAPGALGELGILPGHTPLLTTLKVGELTYRKGGAAFHVA 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           V+ G+  +    V  I+A  A P D+ID +  +  L      L  
Sbjct: 64  VNWGYVEVEEGKVT-ILAETAEPADEIDLARAKAALGRAEDALKK 107


>gi|452751141|ref|ZP_21950887.1| ATP synthase epsilon chain [alpha proteobacterium JLT2015]
 gi|451961291|gb|EMD83701.1| ATP synthase epsilon chain [alpha proteobacterium JLT2015]
          Length = 133

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD--GNDTKKYFVSSGFAFIH 138
           +L +  V  V+VP + G   VL GH P ++ ++ G + V++  G   ++ F+  GFA ++
Sbjct: 13  QLRSGTVHQVVVPGAEGDFAVLEGHAPMMSTIRAGAIEVYEAAGGPAERIFIEGGFAEVN 72

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +  I+A  A P+  ID   +   +    Q+L+ A  D E+A+A+
Sbjct: 73  ETGLT-ILAERAEPVANIDAEQLTAEIERAEQRLARADNDSERAQAE 118


>gi|77462851|ref|YP_352355.1| ATP synthase F0F1 subunit epsilon [Rhodobacter sphaeroides 2.4.1]
 gi|119361399|sp|Q3J430.1|ATPE1_RHOS4 RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|77387269|gb|ABA78454.1| ATP synthase, delta/epsilon subunit [Rhodobacter sphaeroides 2.4.1]
          Length = 132

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           V VP + G M  + GH PTI  L+PG+L  H  +  + Y V+ GFA I+A S++ ++A +
Sbjct: 24  VQVPGTDGDMTAMEGHAPTITTLRPGILRAHGPSGVQAYAVTGGFAEINATSIS-VLAEK 82

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSA 175
           AV ++++  +++ + +AE  +  S A
Sbjct: 83  AVAVEELTGTVLDEFIAEARELASVA 108


>gi|423613444|ref|ZP_17589304.1| ATP synthase epsilon chain [Bacillus cereus VD107]
 gi|401241734|gb|EJR48114.1| ATP synthase epsilon chain [Bacillus cereus VD107]
          Length = 133

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAIRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D  +AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFRRAE 117


>gi|221486484|gb|EEE24745.1| ATP synthase, putative [Toxoplasma gondii GT1]
          Length = 189

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 15/123 (12%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD---GNDTKKYFVSSGFAF----IHA 139
           V  V VP S G M +  GH  T+A LK G + V     G++ +++F+S GF      +H 
Sbjct: 62  VRSVTVPGSEGAMTMTNGHSQTVARLKAGEIIVRKGETGDEVERFFLSDGFVLFKRQVHG 121

Query: 140 NS--------VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVH 191
            S         A+++ VE VP+  +D       L E  Q+ + AT +  KA   +G ++ 
Sbjct: 122 GSPEDDSGCCTAEVLGVEVVPVSMLDKESAATALQELLQQGAGATDEWTKARTLLGQELL 181

Query: 192 SAL 194
           S++
Sbjct: 182 SSV 184


>gi|358053662|ref|ZP_09147398.1| F0F1 ATP synthase subunit epsilon [Staphylococcus simiae CCM 7213]
 gi|357256849|gb|EHJ07170.1| F0F1 ATP synthase subunit epsilon [Staphylococcus simiae CCM 7213]
          Length = 134

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L ++ V P  S     +V++ ++  + G+MG++ GH+PT+A L  G + V+  N T+   
Sbjct: 4   LNLDIVTPNGSVYDRDDVELTVMQTTAGEMGIMSGHIPTVAALTTGYVKVNFHNGTEYVA 63

Query: 130 VSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           VS GF  +  + V+ I+  A  A  ID ++ + + K  AE + +     TD+ +AE
Sbjct: 64  VSDGFVEVRQHKVSIIVQTAETAAEID-VERAKLAKARAESHLENEDDNTDINRAE 118


>gi|436841068|ref|YP_007325446.1| ATP synthase (subunit epsilon, F1 subunit) [Desulfovibrio
           hydrothermalis AM13 = DSM 14728]
 gi|432169974|emb|CCO23345.1| ATP synthase (subunit epsilon, F1 subunit) [Desulfovibrio
           hydrothermalis AM13 = DSM 14728]
          Length = 142

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + SKL +  V P    LS +EVD V  P   G+ G++  H+P ++ L  G L   +GN T
Sbjct: 1   MASKLLLEIVTPDRKVLS-QEVDYVGAPGIEGEFGIMANHIPFLSALGVGNLYFKEGNRT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
              F+S GFA +  N V  I+A  A    +ID +  QK   +   +L+ A  ++E
Sbjct: 60  HYIFISGGFAEVGNNKVT-ILAEVAEKAVEIDIARAQKAQEKAKARLAKAQDNIE 113


>gi|318042251|ref|ZP_07974207.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. CB0101]
          Length = 134

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           D VI+P++TGQ+G+LPGHV  +  L  GVL V +GN  K   +  GFA + A+ V
Sbjct: 20  DEVILPSTTGQLGILPGHVSLLTALDFGVLRVREGNGWKAIALQGGFAEVDADEV 74


>gi|16080733|ref|NP_391561.1| ATP synthase F0F1 subunit epsilon [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221311640|ref|ZP_03593487.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315968|ref|ZP_03597773.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320879|ref|ZP_03602173.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325164|ref|ZP_03606458.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|402777844|ref|YP_006631788.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis QB928]
 gi|418031091|ref|ZP_12669576.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. SC-8]
 gi|452913466|ref|ZP_21962094.1| ATP synthase F1, epsilon subunit [Bacillus subtilis MB73/2]
 gi|584813|sp|P37812.1|ATPE_BACSU RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|433992|emb|CAA82261.1| ATP synthase subunit epsilon [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2636205|emb|CAB15697.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|351472150|gb|EHA32263.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           subtilis str. SC-8]
 gi|402483023|gb|AFQ59532.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus subtilis
           QB928]
 gi|407962523|dbj|BAM55763.1| ATP synthase F0F1 subunit epsilon [Bacillus subtilis BEST7613]
 gi|407966536|dbj|BAM59775.1| ATP synthase F0F1 subunit epsilon [Bacillus subtilis BEST7003]
 gi|452118494|gb|EME08888.1| ATP synthase F1, epsilon subunit [Bacillus subtilis MB73/2]
          Length = 132

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A +++MV V A +G +G+LPGH+PT+A LK G + +     T+   
Sbjct: 4   VKVNIVTPDGPVYDA-DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEMVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
           VS GF  +  + V  I+A  A   + ID    +       ++L+S +  TD+ +AE
Sbjct: 63  VSGGFVEVRPDHVT-ILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAE 117


>gi|30265327|ref|NP_847704.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. Ames]
 gi|47530866|ref|YP_022215.1| ATP synthase F0F1 subunit epsilon [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188140|ref|YP_031393.1| ATP synthase F0F1 subunit epsilon [Bacillus anthracis str. Sterne]
 gi|65317281|ref|ZP_00390240.1| COG0355: F0F1-type ATP synthase, epsilon subunit (mitochondrial
           delta subunit) [Bacillus anthracis str. A2012]
 gi|165873335|ref|ZP_02217938.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. A0488]
 gi|167636366|ref|ZP_02394666.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. A0442]
 gi|177656026|ref|ZP_02937133.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. A0174]
 gi|190567690|ref|ZP_03020602.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str.
           Tsiankovskii-I]
 gi|196036270|ref|ZP_03103668.1| ATP synthase F1, epsilon subunit [Bacillus cereus W]
 gi|196039490|ref|ZP_03106795.1| ATP synthase F1, epsilon subunit [Bacillus cereus NVH0597-99]
 gi|218900430|ref|YP_002448841.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus G9842]
 gi|218906481|ref|YP_002454315.1| F0F1 ATP synthase subunit epsilon [Bacillus cereus AH820]
 gi|227818067|ref|YP_002818076.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. CDC 684]
 gi|228903778|ref|ZP_04067895.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis IBL 4222]
 gi|228911143|ref|ZP_04074949.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis IBL 200]
 gi|228949025|ref|ZP_04111297.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228968431|ref|ZP_04129421.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|229033936|ref|ZP_04188890.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1271]
 gi|229076519|ref|ZP_04209479.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock4-18]
 gi|229105897|ref|ZP_04236521.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock3-28]
 gi|229124808|ref|ZP_04253986.1| ATP synthase F1, epsilon subunit [Bacillus cereus 95/8201]
 gi|229603952|ref|YP_002869519.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. A0248]
 gi|254686273|ref|ZP_05150132.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724269|ref|ZP_05186053.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. A1055]
 gi|254735232|ref|ZP_05192941.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744436|ref|ZP_05202116.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. Kruger
           B]
 gi|254755740|ref|ZP_05207773.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. Vollum]
 gi|254759527|ref|ZP_05211552.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str.
           Australia 94]
 gi|386739162|ref|YP_006212343.1| ATP synthase subunit epsilon [Bacillus anthracis str. H9401]
 gi|402563100|ref|YP_006605824.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis HD-771]
 gi|407707777|ref|YP_006831362.1| acyltransferase [Bacillus thuringiensis MC28]
 gi|421509482|ref|ZP_15956387.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. UR-1]
 gi|421640575|ref|ZP_16081156.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. BF1]
 gi|423362853|ref|ZP_17340353.1| ATP synthase epsilon chain [Bacillus cereus VD022]
 gi|423376900|ref|ZP_17354184.1| ATP synthase epsilon chain [Bacillus cereus BAG1O-2]
 gi|423439997|ref|ZP_17416903.1| ATP synthase epsilon chain [Bacillus cereus BAG4X2-1]
 gi|423449843|ref|ZP_17426722.1| ATP synthase epsilon chain [Bacillus cereus BAG5O-1]
 gi|423463068|ref|ZP_17439836.1| ATP synthase epsilon chain [Bacillus cereus BAG6O-1]
 gi|423532424|ref|ZP_17508842.1| ATP synthase epsilon chain [Bacillus cereus HuB2-9]
 gi|423542308|ref|ZP_17518698.1| ATP synthase epsilon chain [Bacillus cereus HuB4-10]
 gi|423548538|ref|ZP_17524896.1| ATP synthase epsilon chain [Bacillus cereus HuB5-5]
 gi|423565805|ref|ZP_17542080.1| ATP synthase epsilon chain [Bacillus cereus MSX-A1]
 gi|423621655|ref|ZP_17597433.1| ATP synthase epsilon chain [Bacillus cereus VD148]
 gi|434378419|ref|YP_006613063.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis HD-789]
 gi|60389754|sp|Q81JZ6.1|ATPE_BACAN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740221|sp|B7JGM9.1|ATPE_BACC0 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740222|sp|B7IQV7.1|ATPE_BACC2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809344|sp|C3P1F3.1|ATPE_BACAA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809345|sp|C3LFH8.1|ATPE_BACAC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|30260005|gb|AAP29190.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. Ames]
 gi|47506014|gb|AAT34690.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49182067|gb|AAT57443.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. Sterne]
 gi|164710932|gb|EDR16506.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. A0488]
 gi|167528200|gb|EDR90982.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. A0442]
 gi|172079881|gb|EDT64990.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. A0174]
 gi|190561106|gb|EDV15079.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str.
           Tsiankovskii-I]
 gi|195991062|gb|EDX55032.1| ATP synthase F1, epsilon subunit [Bacillus cereus W]
 gi|196029650|gb|EDX68252.1| ATP synthase F1, epsilon subunit [Bacillus cereus NVH0597-99]
 gi|218535179|gb|ACK87577.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH820]
 gi|218541462|gb|ACK93856.1| ATP synthase F1, epsilon subunit [Bacillus cereus G9842]
 gi|227006966|gb|ACP16709.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. CDC 684]
 gi|228658599|gb|EEL14261.1| ATP synthase F1, epsilon subunit [Bacillus cereus 95/8201]
 gi|228677471|gb|EEL31724.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock3-28]
 gi|228706552|gb|EEL58765.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock4-18]
 gi|228728362|gb|EEL79384.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1271]
 gi|228791247|gb|EEM38859.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228810598|gb|EEM56947.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228848506|gb|EEM93354.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis IBL 200]
 gi|228855867|gb|EEN00410.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis IBL 4222]
 gi|229268360|gb|ACQ49997.1| ATP synthase F1, epsilon subunit [Bacillus anthracis str. A0248]
 gi|384389013|gb|AFH86674.1| ATP synthase epsilon chain [Bacillus anthracis str. H9401]
 gi|401077127|gb|EJP85472.1| ATP synthase epsilon chain [Bacillus cereus VD022]
 gi|401127532|gb|EJQ35251.1| ATP synthase epsilon chain [Bacillus cereus BAG5O-1]
 gi|401168755|gb|EJQ76010.1| ATP synthase epsilon chain [Bacillus cereus HuB4-10]
 gi|401174911|gb|EJQ82115.1| ATP synthase epsilon chain [Bacillus cereus HuB5-5]
 gi|401193487|gb|EJR00493.1| ATP synthase epsilon chain [Bacillus cereus MSX-A1]
 gi|401262953|gb|EJR69087.1| ATP synthase epsilon chain [Bacillus cereus VD148]
 gi|401639994|gb|EJS57727.1| ATP synthase epsilon chain [Bacillus cereus BAG1O-2]
 gi|401791752|gb|AFQ17791.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis HD-771]
 gi|401820459|gb|EJT19624.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. UR-1]
 gi|401876976|gb|AFQ29143.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis HD-789]
 gi|402421160|gb|EJV53425.1| ATP synthase epsilon chain [Bacillus cereus BAG4X2-1]
 gi|402422399|gb|EJV54637.1| ATP synthase epsilon chain [Bacillus cereus BAG6O-1]
 gi|402464993|gb|EJV96680.1| ATP synthase epsilon chain [Bacillus cereus HuB2-9]
 gi|403392254|gb|EJY89509.1| F0F1 ATP synthase subunit epsilon [Bacillus anthracis str. BF1]
 gi|407385462|gb|AFU15963.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis MC28]
          Length = 133

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D ++AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFKRAE 117


>gi|228942451|ref|ZP_04104988.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975383|ref|ZP_04135939.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982020|ref|ZP_04142313.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis Bt407]
 gi|229164251|ref|ZP_04292184.1| ATP synthase F1, epsilon subunit [Bacillus cereus R309803]
 gi|384189393|ref|YP_005575289.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis serovar
           chinensis CT-43]
 gi|410677722|ref|YP_006930093.1| ATP synthase epsilon chain [Bacillus thuringiensis Bt407]
 gi|423386793|ref|ZP_17364048.1| ATP synthase epsilon chain [Bacillus cereus BAG1X1-2]
 gi|423394501|ref|ZP_17371702.1| ATP synthase epsilon chain [Bacillus cereus BAG2X1-1]
 gi|423405374|ref|ZP_17382523.1| ATP synthase epsilon chain [Bacillus cereus BAG2X1-3]
 gi|423526875|ref|ZP_17503320.1| ATP synthase epsilon chain [Bacillus cereus HuB1-1]
 gi|423618994|ref|ZP_17594827.1| ATP synthase epsilon chain [Bacillus cereus VD115]
 gi|452201809|ref|YP_007481890.1| ATP synthase epsilon chain [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
 gi|228619191|gb|EEK76084.1| ATP synthase F1, epsilon subunit [Bacillus cereus R309803]
 gi|228777684|gb|EEM25958.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis Bt407]
 gi|228784365|gb|EEM32388.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817193|gb|EEM63281.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326943102|gb|AEA18998.1| F0F1 ATP synthase subunit epsilon [Bacillus thuringiensis serovar
           chinensis CT-43]
 gi|401252470|gb|EJR58731.1| ATP synthase epsilon chain [Bacillus cereus VD115]
 gi|401630645|gb|EJS48443.1| ATP synthase epsilon chain [Bacillus cereus BAG1X1-2]
 gi|401658188|gb|EJS75687.1| ATP synthase epsilon chain [Bacillus cereus BAG2X1-1]
 gi|401661276|gb|EJS78745.1| ATP synthase epsilon chain [Bacillus cereus BAG2X1-3]
 gi|402454747|gb|EJV86537.1| ATP synthase epsilon chain [Bacillus cereus HuB1-1]
 gi|409176851|gb|AFV21156.1| ATP synthase epsilon chain [Bacillus thuringiensis Bt407]
 gi|452107202|gb|AGG04142.1| ATP synthase epsilon chain [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
          Length = 133

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D  +AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFRRAE 117


>gi|379796426|ref|YP_005326427.1| ATP synthase subunit epsilon [Staphylococcus aureus subsp. aureus
           MSHR1132]
 gi|356873419|emb|CCE59758.1| ATP synthase epsilon chain [Staphylococcus aureus subsp. aureus
           MSHR1132]
          Length = 134

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 7/118 (5%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L ++ V P  S      V++V++  + G++GV+ GH+PT+A LK G + V  HDG  T+ 
Sbjct: 4   LNLDIVTPNGSVYDRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEF 61

Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             VS GF  +  + V+ I+  A  A  ID ++ + + K  AE + +     TD+ +AE
Sbjct: 62  IAVSDGFVEVRKHKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118


>gi|154687795|ref|YP_001422956.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           FZB42]
 gi|375364120|ref|YP_005132159.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum CAU B946]
 gi|384267215|ref|YP_005422922.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum YAU B9601-Y2]
 gi|385266588|ref|ZP_10044675.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 5B6]
 gi|394991226|ref|ZP_10384033.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 916]
 gi|421729915|ref|ZP_16169044.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum M27]
 gi|429506974|ref|YP_007188158.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum AS43.3]
 gi|451345162|ref|YP_007443793.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           IT-45]
 gi|452857305|ref|YP_007498988.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens subsp. plantarum UCMB5036]
 gi|166222432|sp|A7Z9P9.1|ATPE_BACA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|154353646|gb|ABS75725.1| AtpC [Bacillus amyloliquefaciens FZB42]
 gi|371570114|emb|CCF06964.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum CAU B946]
 gi|380500568|emb|CCG51606.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum YAU B9601-Y2]
 gi|385151084|gb|EIF15021.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 5B6]
 gi|393807998|gb|EJD69310.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 916]
 gi|407075881|gb|EKE48865.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum M27]
 gi|429488564|gb|AFZ92488.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           subsp. plantarum AS43.3]
 gi|449848920|gb|AGF25912.1| F0F1 ATP synthase subunit epsilon [Bacillus amyloliquefaciens
           IT-45]
 gi|452081565|emb|CCP23335.1| ATP synthase (subunit epsilon, F1 subunit) [Bacillus
           amyloliquefaciens subsp. plantarum UCMB5036]
          Length = 132

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A +++MV V A +G +G+LPGH+PT+A LK G + +     T+   
Sbjct: 4   VKVNIVTPDGPVYDA-DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTELAA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDP--SLVQKGLAEFNQKLSSATTDLEKAE 183
           VS GF  +  + V  I+A  A   + ID   +L  K  AE      S  TD+ +AE
Sbjct: 63  VSGGFLEVRPDQVT-ILAQAAETAESIDKERALAAKKRAEDRLNKRSDDTDIRRAE 117


>gi|116490724|ref|YP_810268.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni PSU-1]
 gi|290890143|ref|ZP_06553225.1| hypothetical protein AWRIB429_0615 [Oenococcus oeni AWRIB429]
 gi|419757731|ref|ZP_14284059.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB304]
 gi|419857377|ref|ZP_14380086.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB202]
 gi|419859104|ref|ZP_14381760.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni DSM 20252
           = AWRIB129]
 gi|421184116|ref|ZP_15641542.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB318]
 gi|421187675|ref|ZP_15645023.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB419]
 gi|421189908|ref|ZP_15647216.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB422]
 gi|421191076|ref|ZP_15648359.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB548]
 gi|421193906|ref|ZP_15651147.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB553]
 gi|421194620|ref|ZP_15651838.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB568]
 gi|421196565|ref|ZP_15653748.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB576]
 gi|116091449|gb|ABJ56603.1| ATP synthase F1 subcomplex epsilon subunit [Oenococcus oeni PSU-1]
 gi|290480187|gb|EFD88829.1| hypothetical protein AWRIB429_0615 [Oenococcus oeni AWRIB429]
 gi|399905548|gb|EJN92988.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB304]
 gi|399967512|gb|EJO01992.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB419]
 gi|399967912|gb|EJO02370.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB318]
 gi|399971119|gb|EJO05408.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB553]
 gi|399971564|gb|EJO05805.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB422]
 gi|399973263|gb|EJO07439.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB548]
 gi|399976548|gb|EJO10562.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB576]
 gi|399977325|gb|EJO11306.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB568]
 gi|410497124|gb|EKP88600.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni DSM 20252
           = AWRIB129]
 gi|410498120|gb|EKP89581.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB202]
          Length = 142

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN 123
           ++  +KLT++ V P  +  +  +V++ ++  S GQMG++  HVP +  LK   + +H G 
Sbjct: 6   STTKNKLTISIVTPDGTAYNQSDVNLTVLDTSIGQMGIMANHVPIVVALKISQMRIHRGE 65

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
               Y V+ GFA   +N+V  ++A  A   + ID
Sbjct: 66  KEDLYTVNGGFAEF-SNNVLTVVADSAENAEDID 98


>gi|108796902|ref|YP_636200.1| ATP synthase CF1 epsilon subunit [Pseudendoclonium akinetum]
 gi|122227093|sp|Q3ZJ67.1|ATPE_PSEAK RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|56159600|gb|AAV80624.1| CF1 epsilon subunit of ATP synthase [Pseudendoclonium akinetum]
          Length = 130

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +E + +I+P +TGQMGVL  H P I  L  G++S+    D     +  GFA +  N V  
Sbjct: 17  QEAEEIILPTNTGQMGVLTNHAPIITALDIGIMSIRTQKDWTSVALMGGFALVKQNQVT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           ++   A   + I+ S  ++   E  ++L  A    EK EA
Sbjct: 76  VLVNSAESKETINSSEAEQAFLEAKEQLEKALGQKEKVEA 115


>gi|163942992|ref|YP_001647876.1| F0F1 ATP synthase subunit epsilon [Bacillus weihenstephanensis
           KBAB4]
 gi|229014474|ref|ZP_04171592.1| ATP synthase F1, epsilon subunit [Bacillus mycoides DSM 2048]
 gi|229136123|ref|ZP_04264876.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-ST196]
 gi|229170012|ref|ZP_04297704.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH621]
 gi|423369269|ref|ZP_17346700.1| ATP synthase epsilon chain [Bacillus cereus VD142]
 gi|423490451|ref|ZP_17467133.1| ATP synthase epsilon chain [Bacillus cereus BtB2-4]
 gi|423496174|ref|ZP_17472818.1| ATP synthase epsilon chain [Bacillus cereus CER057]
 gi|423497032|ref|ZP_17473649.1| ATP synthase epsilon chain [Bacillus cereus CER074]
 gi|423513249|ref|ZP_17489779.1| ATP synthase epsilon chain [Bacillus cereus HuA2-1]
 gi|423519969|ref|ZP_17496450.1| ATP synthase epsilon chain [Bacillus cereus HuA2-4]
 gi|423595517|ref|ZP_17571547.1| ATP synthase epsilon chain [Bacillus cereus VD048]
 gi|423659844|ref|ZP_17635013.1| ATP synthase epsilon chain [Bacillus cereus VDM022]
 gi|423670853|ref|ZP_17645882.1| ATP synthase epsilon chain [Bacillus cereus VDM034]
 gi|423672920|ref|ZP_17647859.1| ATP synthase epsilon chain [Bacillus cereus VDM062]
 gi|226740225|sp|A9VSA2.1|ATPE_BACWK RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|163865189|gb|ABY46248.1| ATP synthase F1, epsilon subunit [Bacillus weihenstephanensis
           KBAB4]
 gi|228613437|gb|EEK70570.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH621]
 gi|228647282|gb|EEL03364.1| ATP synthase F1, epsilon subunit [Bacillus cereus BDRD-ST196]
 gi|228746824|gb|EEL96709.1| ATP synthase F1, epsilon subunit [Bacillus mycoides DSM 2048]
 gi|401078154|gb|EJP86472.1| ATP synthase epsilon chain [Bacillus cereus VD142]
 gi|401149559|gb|EJQ57027.1| ATP synthase epsilon chain [Bacillus cereus CER057]
 gi|401157236|gb|EJQ64636.1| ATP synthase epsilon chain [Bacillus cereus HuA2-4]
 gi|401163233|gb|EJQ70583.1| ATP synthase epsilon chain [Bacillus cereus CER074]
 gi|401221821|gb|EJR28432.1| ATP synthase epsilon chain [Bacillus cereus VD048]
 gi|401295140|gb|EJS00765.1| ATP synthase epsilon chain [Bacillus cereus VDM034]
 gi|401303983|gb|EJS09542.1| ATP synthase epsilon chain [Bacillus cereus VDM022]
 gi|401311020|gb|EJS16328.1| ATP synthase epsilon chain [Bacillus cereus VDM062]
 gi|402429214|gb|EJV61302.1| ATP synthase epsilon chain [Bacillus cereus BtB2-4]
 gi|402445885|gb|EJV77751.1| ATP synthase epsilon chain [Bacillus cereus HuA2-1]
          Length = 133

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D  +AE
Sbjct: 77  VLSSSAEEANHIDIHRANESKRRAEQRMQDKQAHVDFRRAE 117


>gi|41179023|ref|NP_958379.1| ATP synthase CF1 epsilon subunit [Chlamydomonas reinhardtii]
 gi|114595|sp|P07891.4|ATPE_CHLRE RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|11431|emb|CAA37928.1| ATP synthase epsilon subunit [Chlamydomonas reinhardtii]
 gi|28269746|tpg|DAA00924.1| TPA_inf: CF1 ATP synthase epsilon subunit [Chlamydomonas
           reinhardtii]
          Length = 141

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG------NDTKKYFVSSGFAFIHA 139
           + D +I+P  TG+MGVL  H P I  L  G + +  G      ++   Y +  GFA +  
Sbjct: 18  QADEIILPTETGEMGVLKNHAPIITGLNVGAMLIRGGQASGSKDEWNSYAIMGGFALVKQ 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           N V  I+A EAV  + I+P        E      +A  +LEKAE 
Sbjct: 78  NQVT-ILANEAVSAENINPE-------EAKDAFETAKANLEKAEG 114


>gi|87123625|ref|ZP_01079475.1| ATP synthase, Epsilon subunit [Synechococcus sp. RS9917]
 gi|86168194|gb|EAQ69451.1| ATP synthase, Epsilon subunit [Synechococcus sp. RS9917]
          Length = 133

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P  +    +  D VI+P++TGQ+G+LPGHV  +A L  GVL V D N  +   
Sbjct: 3   LTLRVLAPDQNVFDGR-ADEVILPSTTGQLGILPGHVSLLAALDVGVLRVRDTNGWQSIA 61

Query: 130 VSSGFAFIHANSV 142
           +  GFA + A+ V
Sbjct: 62  LMGGFAEVEADEV 74


>gi|336669|gb|AAA84147.1| CF1/CF0 ATPase epsilon subunit [Chlamydomonas reinhardtii]
 gi|225837|prf||1314297A H ATPase epsilon
          Length = 141

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG------NDTKKYFVSSGFAFIHA 139
           + D +I+P  TG+MGVL  H P I  L  G + +  G      ++   Y +  GFA +  
Sbjct: 18  QADEIILPTETGEMGVLKNHAPIITGLNVGAMLIRGGQASGSKDEWNSYAIMGGFALVKQ 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           N V  I+A EAV  + I+P        E      +A  +LEKAE 
Sbjct: 78  NQVT-ILANEAVSAENINPE-------EAKDAFETAKANLEKAEG 114


>gi|182412696|ref|YP_001817762.1| ATP synthase F1 subunit epsilon [Opitutus terrae PB90-1]
 gi|177839910|gb|ACB74162.1| ATP synthase F1, epsilon subunit [Opitutus terrae PB90-1]
          Length = 135

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  V P A  + +  +D V++P + G++G+LPGH+P + +++ G L V     T+   
Sbjct: 3   LTLEIVTPEAR-VYSDTIDSVVIPTADGEVGILPGHIPLLTQVEDGELRVTKNGQTEWLV 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           V  GFA +  + V  ++A  AV    ID   V+  L     ++  A
Sbjct: 62  VGGGFAEVEGDRVR-VLAEHAVTESTIDEKAVEDALRRAQDQMKDA 106


>gi|242280911|ref|YP_002993040.1| F0F1 ATP synthase subunit epsilon [Desulfovibrio salexigens DSM
           2638]
 gi|259585480|sp|C6BSP5.1|ATPE_DESAD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|242123805|gb|ACS81501.1| ATP synthase F1, epsilon subunit [Desulfovibrio salexigens DSM
           2638]
          Length = 142

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 2/115 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + SKL +  V P    LS +EVD V  P   G+ G++  H+P ++ L  G L   +GN T
Sbjct: 1   MASKLLLEIVTPDRKVLS-QEVDYVGAPGIEGEFGIMANHIPFLSALGVGNLYFKEGNRT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
              FVS GFA +  N V  I+A  A    +ID +  QK   +   +L+ A   +E
Sbjct: 60  HYIFVSGGFAEVGNNKVT-ILAEVAEKAVEIDIARAQKAQEKAKARLAKAQDRIE 113


>gi|392958736|ref|ZP_10324243.1| F0F1 ATP synthase subunit epsilon [Bacillus macauensis ZFHKF-1]
 gi|391875206|gb|EIT83819.1| F0F1 ATP synthase subunit epsilon [Bacillus macauensis ZFHKF-1]
          Length = 133

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           +MV   A +G++GV+PGHVP +A L    + VH+G+ T    VS GF  I    V  +  
Sbjct: 21  NMVSAKAKSGELGVMPGHVPLVAPLTINAIRVHEGSKTHYVAVSGGFIEIRPEKVTVLAQ 80

Query: 148 VEAVPID-QIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
              +  D ++D +   K  AE  Q+L+S  +DL++  A++ +
Sbjct: 81  AAELASDIEVDRARAAKERAE--QRLASNQSDLDRKRAELAL 120


>gi|311070199|ref|YP_003975122.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus 1942]
 gi|419821428|ref|ZP_14345022.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus C89]
 gi|310870716|gb|ADP34191.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus 1942]
 gi|388474401|gb|EIM11130.1| F0F1 ATP synthase subunit epsilon [Bacillus atrophaeus C89]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A +++MV V A +G++G+LPGH+PT+A LK G + +     T+   
Sbjct: 4   VKVNIVTPDGPVYDA-DIEMVSVRAESGELGILPGHIPTVAPLKIGAVRLKKDGQTELVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS--SATTDLEKAE 183
           VS GF  +  + V  I+A  A   + ID    Q        +L+  S  TD+ +AE
Sbjct: 63  VSGGFVEVRPDHVT-ILAQSAETAEGIDTERAQAAKQRAQDRLNTRSDDTDIRRAE 117


>gi|429769423|ref|ZP_19301533.1| ATP synthase, delta/epsilon subunit, beta-sandwich domain protein
           [Brevundimonas diminuta 470-4]
 gi|429187087|gb|EKY28007.1| ATP synthase, delta/epsilon subunit, beta-sandwich domain protein
           [Brevundimonas diminuta 470-4]
          Length = 89

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL  + V P   E+ A  VD V  P   G  GVLPGH P +  L+ GV++V+DG   
Sbjct: 1   MAGKLNFSLVAP-EREVFAGSVDQVDAPGVEGDFGVLPGHAPFMTTLREGVVTVYDGAQR 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEA 150
           +++ V  GFA ++   +  I+A EA
Sbjct: 60  RRFEVKGGFADVNGEGLT-ILAEEA 83


>gi|156619213|gb|ABU88285.1| ATP synthase CF1 epsilon subunit [Chlamydomonas moewusii]
          Length = 135

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + + +I+P  TG+MGVL  H P I  L  G + V    +   Y +  GFA +  N+V  I
Sbjct: 18  QAEEIILPTETGEMGVLKNHAPIITGLDVGAMLVRTKENWTSYAIMGGFALVKQNNVT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +A EA   + IDP        E       A T+LEKAE 
Sbjct: 77  LANEAQASESIDPE-------EAKTAFELAKTNLEKAEG 108


>gi|398305166|ref|ZP_10508752.1| F0F1 ATP synthase subunit epsilon [Bacillus vallismortis DV1-F-3]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A +++MV V A +G +G+LPGH+PT+A LK G + +     T+   
Sbjct: 4   VKVNIVTPDGPVYDA-DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTELVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
           VS GF  +  + V  I+A  A   + ID    +       ++L+S +  TD+ +AE
Sbjct: 63  VSGGFVEVRPDHVT-ILAQTAEQAEGIDKERAEAARQRAQERLNSQSYDTDIRRAE 117


>gi|19703699|ref|NP_603261.1| ATP synthase subunit epsilon [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22095472|sp|Q8RGE3.1|ATPE_FUSNN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|19713823|gb|AAL94560.1| ATP synthase epsilon chain, sodium ion specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 134

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +   N  ++  YF+S GF  I  N  A +IA E  P
Sbjct: 28  SEGDIGILPNHAPFVAELSMGKMEIESPNKDRRDIYFLSGGFLEISDNQ-ATVIADEVFP 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSA 193
           I++ID    Q  +    ++L   +T+ EK + Q  + +  A
Sbjct: 87  IEKIDVESEQALVENLKKELEKVSTEEEKRKLQKKIKISLA 127


>gi|418633593|ref|ZP_13196001.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU129]
 gi|420191005|ref|ZP_14696942.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM037]
 gi|420204928|ref|ZP_14710466.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM015]
 gi|374838931|gb|EHS02464.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU129]
 gi|394258103|gb|EJE02995.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM037]
 gi|394271649|gb|EJE16138.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM015]
          Length = 134

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L +N V P  S    ++V+M ++  + G+MG++ GH+PT+A LK G + V  H+GN+   
Sbjct: 4   LRLNIVTPNGSVYEREDVEMAVLQTTAGEMGIMYGHIPTVAALKTGHVKVNFHNGNE--- 60

Query: 128 YFVSSGFAFIHANSVA-DIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAE 183
            F++    FI A      II   A P ++ID    +  K  AE + +     TD+ +A+
Sbjct: 61  -FIAVSDGFIEARQHQLSIIVQTAEPANEIDVERAKLAKSRAESHLEDDDDNTDINRAK 118


>gi|260576483|ref|ZP_05844473.1| ATP synthase F1, epsilon subunit [Rhodobacter sp. SW2]
 gi|259021366|gb|EEW24672.1| ATP synthase F1, epsilon subunit [Rhodobacter sp. SW2]
          Length = 132

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           V +P + G +  + GH PTI  L+PG+L       TK Y V+ GFA I A+ V+ ++A  
Sbjct: 24  VQIPGADGDLTAMEGHAPTITTLRPGILKAISAEGTKTYAVTGGFAEISASGVS-VLAER 82

Query: 150 AVPIDQIDPSLVQK 163
           AVP+D++  +++ +
Sbjct: 83  AVPVDEVTTAMLDE 96


>gi|228936589|ref|ZP_04099383.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823024|gb|EEM68862.1| ATP synthase F1, epsilon subunit [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 133

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    +S GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAISGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D ++AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFKRAE 117


>gi|329890938|ref|ZP_08269281.1| ATP synthase epsilon chain [Brevundimonas diminuta ATCC 11568]
 gi|328846239|gb|EGF95803.1| ATP synthase epsilon chain [Brevundimonas diminuta ATCC 11568]
          Length = 89

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL  + V P   E+ A  VD V  P   G  GVLPGH P +  L+ GV++V+DG   
Sbjct: 1   MAGKLNFSLVAP-EREVFAGSVDQVDAPGVEGDFGVLPGHAPFMTTLREGVVTVYDGAQR 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEA 150
           +++ V  GFA ++   +  I+A EA
Sbjct: 60  RRFEVKGGFADVNGEGLT-ILAEEA 83


>gi|323490922|ref|ZP_08096117.1| F0F1 ATP synthase subunit epsilon [Planococcus donghaensis MPA1U2]
 gi|323395402|gb|EGA88253.1| F0F1 ATP synthase subunit epsilon [Planococcus donghaensis MPA1U2]
          Length = 134

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 70  LTVNFVLP----YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +TVN V P    Y SE+S     MVI   STG+MG+LPGH+PT+A L  G + +   N T
Sbjct: 4   ITVNIVTPDGPVYDSEVS-----MVIAVTSTGEMGILPGHIPTVAPLGIGAVRLKKENST 58

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           +   V+ GF  I    V  I+A  A     ID S  Q+
Sbjct: 59  ELVAVNGGFLEIRPEKVT-ILAQSAERATDIDLSRAQE 95


>gi|423520865|ref|ZP_17497338.1| ATP synthase epsilon chain [Bacillus cereus HuA4-10]
 gi|401179962|gb|EJQ87125.1| ATP synthase epsilon chain [Bacillus cereus HuA4-10]
          Length = 133

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + +  G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKHGGHTDYVAVSGGFIEVRPDKVTV 77

Query: 145 I--IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           +   A EA  ID I  +   K  AE   +   A  D  +AE
Sbjct: 78  LSSSAEEASHID-IHRANESKRRAEQRMQEKQAHVDFRRAE 117


>gi|440228162|ref|YP_007335253.1| ATP synthase F1, epsilon subunit [Rhizobium tropici CIAT 899]
 gi|440039673|gb|AGB72707.1| ATP synthase F1, epsilon subunit [Rhizobium tropici CIAT 899]
          Length = 135

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 73  NFVL--PYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YF 129
           NF L  P    LS + +D V++PAS G+M V+  H PT+  +KPGV+ VH  +  K+ Y 
Sbjct: 6   NFELVSPERLLLSEQVID-VVIPASEGEMTVMANHAPTMTTIKPGVVKVHSASGKKQDYV 64

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           V  GFA I       ++A  AVP++ +          E ++++++A  +LE AE
Sbjct: 65  VFGGFADILPTGCT-LLAESAVPVEDMSRD-------ELDRRINAAKAELEDAE 110


>gi|213517406|gb|ACJ50112.1| ATP synthase CF1 epsilon subunit [Chlamydomonas reinhardtii]
 gi|217315591|gb|ACK37280.1| ATP synthase CF1 epsilon subunit [Chlamydomonas reinhardtii]
 gi|217315593|gb|ACK37281.1| ATP synthase CF1 epsilon subunit [Chlamydomonas reinhardtii]
          Length = 141

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG------NDTKKYFVSSGFAFIHA 139
           + D +I+P  TG+MGVL  H P I  L  G + +  G      ++   Y +  GFA +  
Sbjct: 18  QADEIILPTETGEMGVLKNHAPIITGLDVGAMLIRGGQASGSKDEWNSYAIMGGFALVKQ 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           N V  I+A EAV  + I+P        E      +A  +LEKAE 
Sbjct: 78  NQVT-ILANEAVSAENINPE-------EAKDAFETAKANLEKAEG 114


>gi|158425748|ref|YP_001527040.1| F0F1 ATP synthase subunit epsilon [Azorhizobium caulinodans ORS
           571]
 gi|158332637|dbj|BAF90122.1| H+-transporting two-sector ATPase delta/epsilon subunit
           [Azorhizobium caulinodans ORS 571]
          Length = 138

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA-D 144
           +V  V+VP S GQ GV+ GH P I+ L  G+L++      K+ FV  GFA   AN     
Sbjct: 19  QVTEVVVPGSEGQFGVMAGHAPFISTLSAGILTIKGEGADKRLFVRGGFA--EANPAGLT 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           ++A +A P++  D + +Q+ +    + ++ A +D  + +A
Sbjct: 77  VLAEQATPVESFDRAELQQLIKNAQEDVADAKSDEARQKA 116


>gi|213407018|ref|XP_002174280.1| ATP synthase delta chain [Schizosaccharomyces japonicus yFS275]
 gi|212002327|gb|EEB07987.1| ATP synthase delta chain [Schizosaccharomyces japonicus yFS275]
          Length = 179

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKY 128
           L ++F LP ++      V  V +P   G MG+L  HVP I  L+PGV+ + D N  T K 
Sbjct: 48  LLLSFALPSSTLYERTPVTQVDIPTEHGDMGILKNHVPIIECLRPGVIKITDVNGATDKL 107

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           F + GFA    N+   I + EA  +D          L +  +   +  ++ EK    + +
Sbjct: 108 FSAGGFAVQQPNNHLCITSPEAFRLDDFASVSEVTSLLDQAKTQQATASETEKPAVDVRI 167

Query: 189 DVHSALNSALTG 200
            V  A+  AL G
Sbjct: 168 SVLEAILQALRG 179


>gi|239832876|ref|ZP_04681205.1| ATP synthase F1, epsilon subunit [Ochrobactrum intermedium LMG
           3301]
 gi|239825143|gb|EEQ96711.1| ATP synthase F1, epsilon subunit [Ochrobactrum intermedium LMG
           3301]
          Length = 138

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  +  Y V  GFA I  
Sbjct: 19  LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-SDSYVVFGGFADITP 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
            S   ++A  A  +D I+P+ +Q+ + E  + L  A+T+  + +A+I
Sbjct: 78  QSCT-VLAESATHVDDINPADIQRRIEEARKHLEDASTNEHRTKAEI 123


>gi|195953461|ref|YP_002121751.1| ATP synthase F1 subunit epsilon [Hydrogenobaculum sp. Y04AAS1]
 gi|226740264|sp|B4U9G2.1|ATPE_HYDS0 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|195933073|gb|ACG57773.1| ATP synthase F1, epsilon subunit [Hydrogenobaculum sp. Y04AAS1]
          Length = 136

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L V+ V P    +  +EV+ V +PA  G+MG+L  H+  + ++KPG L   + +D     
Sbjct: 2   LKVDIVTPKGI-VYTEEVESVNIPAYDGEMGILENHMLLLTQIKPG-LVYFNKDDKNGIA 59

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           V  GFA I  + V  I+  EAVP+  ID    +K   E  +KLS A T  E +E Q
Sbjct: 60  VGYGFADITPDKVI-ILTEEAVPVGNIDLEEYKKVFEEATRKLSDARTAEEISEWQ 114


>gi|149034589|gb|EDL89326.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_d [Rattus norvegicus]
          Length = 190

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
            +++  F  P         V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  T
Sbjct: 36  GQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHAEDGT-T 94

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVP 152
            KYFVSSG   ++A+S   ++A E  P
Sbjct: 95  TKYFVSSGSVTVNADSSVQLLAEEVSP 121


>gi|118586545|ref|ZP_01543987.1| ATP synthase, epsilon subunit [Oenococcus oeni ATCC BAA-1163]
 gi|421186685|ref|ZP_15644067.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB418]
 gi|118432986|gb|EAV39710.1| ATP synthase, epsilon subunit [Oenococcus oeni ATCC BAA-1163]
 gi|399965489|gb|EJO00061.1| F0F1-type ATP synthase, epsilon subunit [Oenococcus oeni AWRIB418]
          Length = 142

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 64  TSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN 123
           ++  +KLT++ V P  +  +  +V++ ++  S GQMG++  HVP +  LK   + +H G 
Sbjct: 6   STTKNKLTISIVTPDGTVYNQSDVNLTVLDTSIGQMGIMANHVPIVVALKISQMRIHRGE 65

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQID 157
               Y V+ GFA   +N+V  ++A  A   + ID
Sbjct: 66  KEDLYTVNGGFAEF-SNNVLTVVADSAENAEDID 98


>gi|338741536|ref|YP_004678498.1| ATP synthase subunit epsilon [Hyphomicrobium sp. MC1]
 gi|337762099|emb|CCB67934.1| ATP synthase epsilon chain [Hyphomicrobium sp. MC1]
          Length = 131

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L + + + V+VP + G+  VL GHVP I+ L PGVL V  G+  K+ FV SGFA +    
Sbjct: 16  LMSVDAEQVVVPGTDGEFTVLAGHVPVISTLVPGVLDVTAGSVHKRLFVKSGFAEVDPAR 75

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +  ++A +A  +D++  + +   L     +L++A  D
Sbjct: 76  LT-VLAEKAYDVDEMSAATIAAELKTAEAELAAAKDD 111


>gi|398308650|ref|ZP_10512124.1| F0F1 ATP synthase subunit epsilon [Bacillus mojavensis RO-H-1]
          Length = 132

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A  ++MV V A +G +G+LPGH+PT+A LK G + +     T+   
Sbjct: 4   VQVNIVTPDGPVYDAN-IEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTELVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
           VS GF  +  + V  I+A  A   + ID    +       ++L+S +  TD+ +AE
Sbjct: 63  VSGGFIEVRPDQVT-ILAQTAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAE 117


>gi|314934171|ref|ZP_07841532.1| ATP synthase F1, epsilon subunit [Staphylococcus caprae C87]
 gi|313653076|gb|EFS16837.1| ATP synthase F1, epsilon subunit [Staphylococcus caprae C87]
          Length = 134

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L++N V P  S    ++V++ ++  + G+MG++ GH+PT+A LK G + V  H+GN+   
Sbjct: 4   LSLNIVTPNGSVYEREDVELAVLQTTAGEMGIMSGHIPTVAALKTGYVKVNFHNGNE--- 60

Query: 128 YF-VSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           Y  VS GF  +  + ++ I+  A  A  ID ++ + + K  AE + +     +D+ +A+
Sbjct: 61  YIAVSDGFVEVRQHKLSIIVQTAETASEID-VERAKLAKSRAESHLEEDDDNSDINRAK 118


>gi|229175978|ref|ZP_04303474.1| ATP synthase F1, epsilon subunit [Bacillus cereus MM3]
 gi|423399854|ref|ZP_17377027.1| ATP synthase epsilon chain [Bacillus cereus BAG2X1-2]
 gi|423461912|ref|ZP_17438708.1| ATP synthase epsilon chain [Bacillus cereus BAG5X2-1]
 gi|423479454|ref|ZP_17456169.1| ATP synthase epsilon chain [Bacillus cereus BAG6X1-1]
 gi|228607471|gb|EEK64797.1| ATP synthase F1, epsilon subunit [Bacillus cereus MM3]
 gi|401134089|gb|EJQ41708.1| ATP synthase epsilon chain [Bacillus cereus BAG5X2-1]
 gi|401656915|gb|EJS74428.1| ATP synthase epsilon chain [Bacillus cereus BAG2X1-2]
 gi|402425758|gb|EJV57904.1| ATP synthase epsilon chain [Bacillus cereus BAG6X1-1]
          Length = 133

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + +  G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKHGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D  +AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFRRAE 117


>gi|57867648|ref|YP_189273.1| ATP synthase F0F1 subunit epsilon [Staphylococcus epidermidis
           RP62A]
 gi|251812185|ref|ZP_04826658.1| F0F1 ATP synthase subunit epsilon [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876490|ref|ZP_06285356.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis SK135]
 gi|417656928|ref|ZP_12306606.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU028]
 gi|417913841|ref|ZP_12557502.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU109]
 gi|418604061|ref|ZP_13167428.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU041]
 gi|418609358|ref|ZP_13172511.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU065]
 gi|418624594|ref|ZP_13187267.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU125]
 gi|418663691|ref|ZP_13225200.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU081]
 gi|419768468|ref|ZP_14294590.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-250]
 gi|419771576|ref|ZP_14297627.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-K]
 gi|420220961|ref|ZP_14725916.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH04008]
 gi|420233567|ref|ZP_14738175.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH051668]
 gi|421608809|ref|ZP_16050022.1| F0F1 ATP synthase subunit epsilon [Staphylococcus epidermidis
           AU12-03]
 gi|81673873|sp|Q5HMC0.1|ATPE_STAEQ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|57638306|gb|AAW55094.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis RP62A]
 gi|251804282|gb|EES56939.1| F0F1 ATP synthase subunit epsilon [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294742|gb|EFA87270.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis SK135]
 gi|329735706|gb|EGG71989.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU028]
 gi|341654299|gb|EGS78046.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU109]
 gi|374405857|gb|EHQ76768.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU041]
 gi|374407760|gb|EHQ78608.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU065]
 gi|374411229|gb|EHQ81946.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU081]
 gi|374827156|gb|EHR91022.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU125]
 gi|383359832|gb|EID37242.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-250]
 gi|383361074|gb|EID38456.1| ATP synthase F1, epsilon subunit [Staphylococcus aureus subsp.
           aureus IS-K]
 gi|394285411|gb|EJE29490.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH04008]
 gi|394299849|gb|EJE43377.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH051668]
 gi|406655550|gb|EKC81976.1| F0F1 ATP synthase subunit epsilon [Staphylococcus epidermidis
           AU12-03]
          Length = 134

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L +N V P  S    ++V+M ++  + G+MG++ GH+PT+A LK G + V  H+GN+   
Sbjct: 4   LRLNIVTPNGSVYEREDVEMAVLQTTAGEMGIMYGHIPTVAALKTGHVKVNFHNGNE--- 60

Query: 128 YFVSSGFAFIHANSVA-DIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAE 183
            F++    FI A      II   A P  +ID    +  K  AE + +     TD+ +A+
Sbjct: 61  -FIAVSDGFIEARQHQLSIIVQTAEPASEIDVERAKLAKSRAESHLEEDDDNTDINRAK 118


>gi|15966786|ref|NP_387139.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti 1021]
 gi|15076058|emb|CAC47612.1| Probable ATP synthase epsilon chain [Sinorhizobium meliloti 1021]
          Length = 136

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 61/102 (59%), Gaps = 9/102 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVSSGFAFIHAN 140
           L +++V  V++PA+ G+M V+  H PT+  +KPGV++V      T++Y V  GFA I  +
Sbjct: 18  LVSEKVTEVVIPATEGEMTVMANHAPTMTTIKPGVVAVKTAAGKTERYAVFGGFADILPS 77

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
               ++A  AV +D++DP++++        ++ +A  +LE A
Sbjct: 78  GCT-LLAESAVHVDELDPTVLE-------NRIEAARAELEGA 111


>gi|444309787|ref|ZP_21145418.1| F0F1 ATP synthase subunit epsilon [Ochrobactrum intermedium M86]
 gi|443486869|gb|ELT49640.1| F0F1 ATP synthase subunit epsilon [Ochrobactrum intermedium M86]
          Length = 135

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  +  Y V  GFA I  
Sbjct: 16  LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-SDSYVVFGGFADITP 74

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
            S   ++A  A  +D I+P+ +Q+ + E  + L  A+T+  + +A+I
Sbjct: 75  QSCT-VLAESATHVDDINPADIQRRIEEARKHLEDASTNEHRTKAEI 120


>gi|163761384|ref|ZP_02168458.1| ATP synthase subunit epsilon [Hoeflea phototrophica DFL-43]
 gi|162281379|gb|EDQ31676.1| ATP synthase subunit epsilon [Hoeflea phototrophica DFL-43]
          Length = 135

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 2/110 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADIIAV 148
           V++P + G+M V+  H PT+  +KPGV+SV      T++Y V  GFA I  +    ++A 
Sbjct: 24  VVLPGTDGEMTVMAHHAPTMTTIKPGVVSVVTAEGATERYVVFGGFADILPDGCT-LLAE 82

Query: 149 EAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            AV +  ID   + + L +  + ++ A++D  K +AQ  +D  + LN A+
Sbjct: 83  SAVAVGDIDRDDLAQRLQDAREDVADASSDAAKQKAQDYLDHLTTLNEAI 132


>gi|334317788|ref|YP_004550407.1| ATP synthase subunit epsilon [Sinorhizobium meliloti AK83]
 gi|384530912|ref|YP_005715000.1| ATP synthase subunit epsilon [Sinorhizobium meliloti BL225C]
 gi|384537625|ref|YP_005721710.1| probabable ATP synthase subunit epsilon [Sinorhizobium meliloti
           SM11]
 gi|407722098|ref|YP_006841760.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti Rm41]
 gi|418401821|ref|ZP_12975344.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti
           CCNWSX0020]
 gi|433614860|ref|YP_007191658.1| ATP synthase, F1 epsilon subunit (delta in mitochondria)
           [Sinorhizobium meliloti GR4]
 gi|20137399|sp|Q92LK9.2|ATPE_RHIME RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|333813088|gb|AEG05757.1| ATP synthase epsilon chain [Sinorhizobium meliloti BL225C]
 gi|334096782|gb|AEG54793.1| ATP synthase epsilon chain [Sinorhizobium meliloti AK83]
 gi|336034517|gb|AEH80449.1| probabable ATP synthase subunit epsilon [Sinorhizobium meliloti
           SM11]
 gi|359504233|gb|EHK76772.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti
           CCNWSX0020]
 gi|407320330|emb|CCM68934.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium meliloti Rm41]
 gi|429553050|gb|AGA08059.1| ATP synthase, F1 epsilon subunit (delta in mitochondria)
           [Sinorhizobium meliloti GR4]
          Length = 134

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 61/102 (59%), Gaps = 9/102 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVSSGFAFIHAN 140
           L +++V  V++PA+ G+M V+  H PT+  +KPGV++V      T++Y V  GFA I  +
Sbjct: 16  LVSEKVTEVVIPATEGEMTVMANHAPTMTTIKPGVVAVKTAAGKTERYAVFGGFADILPS 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
               ++A  AV +D++DP++++        ++ +A  +LE A
Sbjct: 76  GCT-LLAESAVHVDELDPTVLE-------NRIEAARAELEGA 109


>gi|229020523|ref|ZP_04177269.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1273]
 gi|229026743|ref|ZP_04183076.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1272]
 gi|229064955|ref|ZP_04200253.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH603]
 gi|423388398|ref|ZP_17365624.1| ATP synthase epsilon chain [Bacillus cereus BAG1X1-3]
 gi|423416784|ref|ZP_17393873.1| ATP synthase epsilon chain [Bacillus cereus BAG3X2-1]
 gi|228716256|gb|EEL67968.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH603]
 gi|228734538|gb|EEL85199.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1272]
 gi|228740770|gb|EEL91022.1| ATP synthase F1, epsilon subunit [Bacillus cereus AH1273]
 gi|401109346|gb|EJQ17271.1| ATP synthase epsilon chain [Bacillus cereus BAG3X2-1]
 gi|401643207|gb|EJS60908.1| ATP synthase epsilon chain [Bacillus cereus BAG1X1-3]
          Length = 133

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + +  G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKHGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D  +AE
Sbjct: 77  VLSSSAEEANHIDIHRANESKRRAEQRMQDKQAHVDFRRAE 117


>gi|452944275|ref|YP_007500440.1| ATP synthase F1, epsilon subunit [Hydrogenobaculum sp. HO]
 gi|452882693|gb|AGG15397.1| ATP synthase F1, epsilon subunit [Hydrogenobaculum sp. HO]
          Length = 136

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L V+ V P    +  +EV+ V +PA  G+MG+L  H+  + ++KPG L   + +D     
Sbjct: 2   LKVDIVTPKGV-VYTEEVESVNIPAYDGEMGILENHMLLLTQIKPG-LVYFNKDDKNGIA 59

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           V  GFA I  + V  I+  EA+P+  ID    +K   E  +KLS A T  E +E Q
Sbjct: 60  VGYGFADITPDKVI-ILTEEAIPVGNIDLEEYKKVFEEATRKLSDAKTAEEISEWQ 114


>gi|335423681|ref|ZP_08552701.1| ATP synthase F1, epsilon subunit [Salinisphaera shabanensis E1L3A]
 gi|334891144|gb|EGM29399.1| ATP synthase F1, epsilon subunit [Salinisphaera shabanensis E1L3A]
          Length = 145

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKK 127
           ++ V  V P    + + + DMV+VPA+ G +G+ PGH   +  ++PGV+  V+ G ++  
Sbjct: 9   QIRVEIVCPVQGPIFSGQADMVVVPAAYGDVGIAPGHARMLTRIEPGVVRLVNSGQESIN 68

Query: 128 YFVSSGFAFIH---ANSVADIIAVEAVPIDQ 155
           YFVS GF  +    A  +AD I   A  ID+
Sbjct: 69  YFVSGGFLEVEPTLATVLADTIE-RAADIDK 98


>gi|149034586|gb|EDL89323.1| ATP synthase, H+ transporting, mitochondrial F1 complex, delta
           subunit, isoform CRA_a [Rattus norvegicus]
          Length = 137

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 112 LKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           L+PG++ VH  DG  T KYFVSSG   ++A+S   ++A E V +D +D    +  L +  
Sbjct: 49  LRPGLVVVHAEDGT-TTKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQ 107

Query: 170 QKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +LS A  +  +AE QI ++ + AL  AL
Sbjct: 108 SELSGAADEAARAEIQIRIEANEALVKAL 136


>gi|113476899|ref|YP_722960.1| F0F1 ATP synthase subunit epsilon [Trichodesmium erythraeum IMS101]
 gi|119367808|sp|Q10Z37.1|ATPE_TRIEI RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|110167947|gb|ABG52487.1| ATP synthase F1, epsilon subunit [Trichodesmium erythraeum IMS101]
          Length = 137

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  + +  KE   VI+P++TGQ+G+L GH P +  L  GV+ V   ND     
Sbjct: 3   LTVRVIAPDKT-IWDKEAQEVILPSTTGQLGILGGHAPLLTALDTGVMRVRAENDWIAIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           +  GFA I A+ V+ I+   A   D ID    +    E  ++L ++
Sbjct: 62  LMGGFAEIEADEVS-ILVNGAERGDNIDTEKARLAYEEAEKRLQTS 106


>gi|229000090|ref|ZP_04159660.1| ATP synthase F1, epsilon subunit [Bacillus mycoides Rock3-17]
 gi|229007610|ref|ZP_04165204.1| ATP synthase F1, epsilon subunit [Bacillus mycoides Rock1-4]
 gi|228753621|gb|EEM03065.1| ATP synthase F1, epsilon subunit [Bacillus mycoides Rock1-4]
 gi|228759627|gb|EEM08603.1| ATP synthase F1, epsilon subunit [Bacillus mycoides Rock3-17]
          Length = 133

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYIAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
           ++A  A   + ID     +      Q++       D ++AE
Sbjct: 77  VLAPSAEEANHIDIHRANEAKRRAEQRMQDKQVHVDFKRAE 117


>gi|333980758|ref|YP_004518703.1| ATP synthase subunit epsilon [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333824239|gb|AEG16902.1| ATP synthase epsilon chain [Desulfotomaculum kuznetsovii DSM 6115]
          Length = 133

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V  V+VP   G++G LP H P ++ LK GV+ V + + T K  +S GF  +  NS   +
Sbjct: 21  DVRFVVVPGVEGELGFLPDHAPLVSALKIGVMKVQEDSRTFKVAISGGFVEVR-NSRVTV 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   D+ID    +   A   Q+L++ T D++   A++ +
Sbjct: 80  LARTAERDDEIDRERAEAAKARAEQRLAARTPDIDVVRAELAL 122


>gi|223939529|ref|ZP_03631405.1| ATP synthase F1, epsilon subunit [bacterium Ellin514]
 gi|223891801|gb|EEF58286.1| ATP synthase F1, epsilon subunit [bacterium Ellin514]
          Length = 136

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + + L +  V P A   S ++VDMV +P + G+MG+ P HVP + ++ PG + V    D 
Sbjct: 1   MANTLKLEIVTPEAKTYS-EDVDMVTLPGAEGEMGIFPNHVPLMTQIVPGEIGVR--KDG 57

Query: 126 KKYF--VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
           + YF  V  GFA I    VA I+   A+  + ID +  ++       +L+    D + A
Sbjct: 58  RDYFLAVGEGFAEITGTRVA-ILTDMAIKAENIDEAKAEEAKRRAEARLAEKLDDEQAA 115


>gi|24215475|ref|NP_712956.1| F0F1 ATP synthase subunit epsilon [Leptospira interrogans serovar
           Lai str. 56601]
 gi|45657127|ref|YP_001213.1| F0F1 ATP synthase subunit epsilon [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|386074717|ref|YP_005989034.1| ATP synthase F1 sector epsilon subunit [Leptospira interrogans
           serovar Lai str. IPAV]
 gi|417766865|ref|ZP_12414814.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|417771647|ref|ZP_12419541.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Pomona str. Pomona]
 gi|417783923|ref|ZP_12431635.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           C10069]
 gi|418669048|ref|ZP_13230447.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418682987|ref|ZP_13244200.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Pomona str. Kennewicki LC82-25]
 gi|418690381|ref|ZP_13251497.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           FPW2026]
 gi|418700355|ref|ZP_13261297.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|418703812|ref|ZP_13264695.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|418710749|ref|ZP_13271517.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|418714377|ref|ZP_13274937.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. UI
           08452]
 gi|418724068|ref|ZP_13282900.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. UI
           12621]
 gi|418734710|ref|ZP_13291141.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. UI
           12758]
 gi|421084108|ref|ZP_15544972.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           HAI1594]
 gi|421104773|ref|ZP_15565366.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|421117110|ref|ZP_15577480.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|421120199|ref|ZP_15580513.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. Brem
           329]
 gi|421125781|ref|ZP_15586025.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136845|ref|ZP_15596942.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|60389684|sp|Q72SX8.1|ATPE_LEPIC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389794|sp|Q8F2J6.1|ATPE_LEPIN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|24196606|gb|AAN49974.1| ATP synthase F1 sector epsilon subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45600365|gb|AAS69850.1| ATP synthase epsilon chain [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|353458506|gb|AER03051.1| ATP synthase F1 sector epsilon subunit [Leptospira interrogans
           serovar Lai str. IPAV]
 gi|400325546|gb|EJO77822.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Pomona str. Kennewicki LC82-25]
 gi|400350671|gb|EJP02929.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400360566|gb|EJP16538.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           FPW2026]
 gi|409946434|gb|EKN96444.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Pomona str. Pomona]
 gi|409952754|gb|EKO07261.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           C10069]
 gi|409962390|gb|EKO26126.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. UI
           12621]
 gi|410011407|gb|EKO69528.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410019027|gb|EKO85855.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410347285|gb|EKO98204.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. Brem
           329]
 gi|410365083|gb|EKP20478.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433280|gb|EKP77627.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           HAI1594]
 gi|410436433|gb|EKP85545.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410755254|gb|EKR16885.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410760256|gb|EKR26452.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410766509|gb|EKR37193.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410768971|gb|EKR44216.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772582|gb|EKR52623.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. UI
           12758]
 gi|410789320|gb|EKR83022.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str. UI
           08452]
 gi|455669003|gb|EMF34172.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Pomona str. Fox 32256]
 gi|455789476|gb|EMF41405.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Lora str. TE 1992]
 gi|456825250|gb|EMF73646.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Canicola str. LT1962]
 gi|456969577|gb|EMG10554.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
 gi|456983858|gb|EMG20053.1| ATP synthase F1, epsilon subunit [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 127

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD +IVP S G  G+LP H P +A L  G+L +  G   K 
Sbjct: 4   NKLKVSVISPEKI-LYKGEVDSLIVPGSEGFFGILPNHAPLVATLGIGILEIRKGEKLKV 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
             V  GF  I  NS++ I+       + ID  + +K LAE
Sbjct: 63  LSVEGGFVEIKDNSIS-ILTDHGALKEDIDLEVEKKNLAE 101


>gi|229087792|ref|ZP_04219912.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock3-44]
 gi|228695520|gb|EEL48385.1| ATP synthase F1, epsilon subunit [Bacillus cereus Rock3-44]
          Length = 133

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+LPGH+PT+A LK   + +  G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKTGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
           +++  A   + ID     +      Q++    A  D  +AE
Sbjct: 77  VLSSSAEEANHIDIHRANEAKRRAEQRMQDKQAHVDFRRAE 117


>gi|27468617|ref|NP_765254.1| ATP synthase F0F1 subunit epsilon [Staphylococcus epidermidis ATCC
           12228]
 gi|242241508|ref|ZP_04795953.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F
           family ATPase epsilon subunit [Staphylococcus
           epidermidis W23144]
 gi|293366066|ref|ZP_06612754.1| ATP synthase F1 sector epsilon subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|416128236|ref|ZP_11597241.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           FRI909]
 gi|417660272|ref|ZP_12309861.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU045]
 gi|417909020|ref|ZP_12552770.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU037]
 gi|417912469|ref|ZP_12556161.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU105]
 gi|418326908|ref|ZP_12938083.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU071]
 gi|418328399|ref|ZP_12939512.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           14.1.R1.SE]
 gi|418413320|ref|ZP_12986562.1| ATP synthase epsilon chain [Staphylococcus epidermidis BVS058A4]
 gi|418607561|ref|ZP_13170791.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU057]
 gi|418613189|ref|ZP_13176205.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU117]
 gi|418614598|ref|ZP_13177561.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU118]
 gi|418617925|ref|ZP_13180811.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU120]
 gi|418622354|ref|ZP_13185106.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU123]
 gi|418627670|ref|ZP_13190242.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU126]
 gi|418629904|ref|ZP_13192397.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU127]
 gi|418632453|ref|ZP_13194884.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU128]
 gi|420164468|ref|ZP_14671197.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM095]
 gi|420166545|ref|ZP_14673229.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM088]
 gi|420169244|ref|ZP_14675847.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM087]
 gi|420171704|ref|ZP_14678239.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM070]
 gi|420173627|ref|ZP_14680118.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM067]
 gi|420174269|ref|ZP_14680722.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM061]
 gi|420178530|ref|ZP_14684860.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM057]
 gi|420181324|ref|ZP_14687527.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM053]
 gi|420182073|ref|ZP_14688215.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM049]
 gi|420186311|ref|ZP_14692382.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM040]
 gi|420186934|ref|ZP_14692958.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM039]
 gi|420193534|ref|ZP_14699385.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM023]
 gi|420195919|ref|ZP_14701703.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM021]
 gi|420198040|ref|ZP_14703758.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM020]
 gi|420200792|ref|ZP_14706432.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM031]
 gi|420202815|ref|ZP_14708403.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM018]
 gi|420207923|ref|ZP_14713408.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM008]
 gi|420210282|ref|ZP_14715711.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM003]
 gi|420212538|ref|ZP_14717887.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM001]
 gi|420215214|ref|ZP_14720485.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH05005]
 gi|420216719|ref|ZP_14721917.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH05001]
 gi|420223666|ref|ZP_14728561.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH08001]
 gi|420226161|ref|ZP_14730983.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH06004]
 gi|420228575|ref|ZP_14733324.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH05003]
 gi|420230961|ref|ZP_14735638.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH04003]
 gi|420235997|ref|ZP_14740528.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH051475]
 gi|38257567|sp|Q8CNJ8.1|ATPE_STAES RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|27316164|gb|AAO05298.1|AE016749_244 FoF1-ATP synthase epsilon subunit [Staphylococcus epidermidis ATCC
           12228]
 gi|242235051|gb|EES37362.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F
           family ATPase epsilon subunit [Staphylococcus
           epidermidis W23144]
 gi|291319789|gb|EFE60147.1| ATP synthase F1 sector epsilon subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|319399586|gb|EFV87841.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           FRI909]
 gi|329734189|gb|EGG70507.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU045]
 gi|341650681|gb|EGS74497.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU105]
 gi|341654660|gb|EGS78399.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU037]
 gi|365224014|gb|EHM65284.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU071]
 gi|365231998|gb|EHM73013.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           14.1.R1.SE]
 gi|374404415|gb|EHQ75389.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU057]
 gi|374816625|gb|EHR80826.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU117]
 gi|374817186|gb|EHR81372.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU120]
 gi|374819488|gb|EHR83610.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU118]
 gi|374826948|gb|EHR90823.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU123]
 gi|374829116|gb|EHR92930.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU126]
 gi|374832360|gb|EHR96075.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU128]
 gi|374832423|gb|EHR96133.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU127]
 gi|394231573|gb|EJD77199.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM095]
 gi|394231707|gb|EJD77331.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM087]
 gi|394233552|gb|EJD79153.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM088]
 gi|394236819|gb|EJD82322.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM070]
 gi|394239664|gb|EJD85099.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM067]
 gi|394245203|gb|EJD90520.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM061]
 gi|394246253|gb|EJD91514.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM057]
 gi|394246672|gb|EJD91926.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM053]
 gi|394250537|gb|EJD95719.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM049]
 gi|394252528|gb|EJD97560.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM040]
 gi|394256900|gb|EJE01824.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM039]
 gi|394259801|gb|EJE04632.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM023]
 gi|394262520|gb|EJE07282.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM021]
 gi|394264971|gb|EJE09637.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM020]
 gi|394267536|gb|EJE12123.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM031]
 gi|394268994|gb|EJE13539.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM018]
 gi|394274943|gb|EJE19338.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM008]
 gi|394276516|gb|EJE20854.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM003]
 gi|394279659|gb|EJE23962.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIHLM001]
 gi|394282494|gb|EJE26687.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH05005]
 gi|394287164|gb|EJE31131.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH08001]
 gi|394291398|gb|EJE35210.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH05001]
 gi|394292647|gb|EJE36387.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH06004]
 gi|394294609|gb|EJE38280.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH05003]
 gi|394295844|gb|EJE39480.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH04003]
 gi|394301633|gb|EJE45088.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           NIH051475]
 gi|410879207|gb|EKS27058.1| ATP synthase epsilon chain [Staphylococcus epidermidis BVS058A4]
          Length = 134

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L +N V P  S    ++V+M ++  + G+MG++ GH+PT+A LK G + V  H+GN+   
Sbjct: 4   LRLNIVTPNGSVYEREDVEMAVLQTTAGEMGIMYGHIPTVAALKTGHVKVNFHNGNE--- 60

Query: 128 YFVSSGFAFIHANSVA-DIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAE 183
            F++    FI A      II   A P  +ID    +  K  AE + +     TD+ +A+
Sbjct: 61  -FIAVSDGFIEARQHQLSIIVQTAEPASEIDVERAKLAKSRAESHLEDDDDNTDINRAK 118


>gi|126736548|ref|ZP_01752288.1| ATP synthase F1, epsilon subunit [Roseobacter sp. CCS2]
 gi|126713861|gb|EBA10732.1| ATP synthase F1, epsilon subunit [Roseobacter sp. CCS2]
          Length = 141

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           + L  + V P    L++ E   V +P + G M  +  H PTI  L+PG+L+V  G  +  
Sbjct: 2   ANLQFDLVSP-ERRLASVEASEVQIPGADGDMTAMADHAPTITTLRPGILTVVHGGGSDA 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQI 156
           Y VS GFA I A SV+ ++A +A+P D++
Sbjct: 61  YVVSGGFAEITAASVS-VLAEQALPRDEV 88


>gi|254302778|ref|ZP_04970136.1| F-type two-sector ATPase, F(1) epsilon subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322970|gb|EDK88220.1| F-type two-sector ATPase, F(1) epsilon subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 134

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +   N  K+  YF+S GF  I +N+ A IIA E  P
Sbjct: 28  SEGDIGILPNHAPFVAELSMGKMEIESPNKDKRDIYFLSGGFLEI-SNNQATIIADEIFP 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           I++ID    Q  +    ++L    TD E
Sbjct: 87  IEEIDIESEQTLVDNLKKELEKLETDEE 114


>gi|298293436|ref|YP_003695375.1| ATP synthase F1 subunit epsilon [Starkeya novella DSM 506]
 gi|296929947|gb|ADH90756.1| ATP synthase F1, epsilon subunit [Starkeya novella DSM 506]
          Length = 138

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V  V+VP + G+ G+L GH P ++ LKPG+L++     T+K FV  GFA  +   +  ++
Sbjct: 20  VSEVVVPGTEGEFGILAGHAPFVSTLKPGILTIKGDGATRKLFVRGGFAEANPQGLT-VL 78

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           A  A+P+ ++             Q +  A  D+E A+ +
Sbjct: 79  AETAIPLAELHAE-------NLTQMIKDAEEDVEDAKDE 110


>gi|404494820|ref|YP_006718926.1| F0F1 ATP synthase subunit epsilon [Pelobacter carbinolicus DSM
           2380]
 gi|119361404|sp|Q39ZU2.1|ATPE2_PELCD RecName: Full=ATP synthase epsilon chain 2; AltName: Full=ATP
           synthase F1 sector epsilon subunit 2; AltName:
           Full=F-ATPase epsilon subunit 2
 gi|77546803|gb|ABA90365.1| ATP synthase F1, epsilon subunit [Pelobacter carbinolicus DSM 2380]
          Length = 138

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 4/112 (3%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL +  V P A  LS +EVD +  P S GQ GVLPGH P +  L+ G  S   G+D 
Sbjct: 1   MAQKLKLEMVTPAAQVLS-EEVDEIAAPGSLGQFGVLPGHTPLLTTLQVGEFSYRKGSDV 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVE-AVPIDQIDPSLVQKGLAEFNQKLSSAT 176
             Y+++  + ++       ++ VE A   D ID +  +  L     +L   T
Sbjct: 60  --YYLAVNWGYVEVAEDRVLVLVETAETQDHIDLARAKAALGRAEARLRELT 109


>gi|222087436|ref|YP_002545973.1| F0F1 ATP synthase subunit epsilon [Agrobacterium radiobacter K84]
 gi|254809340|sp|B9JBZ4.1|ATPE_AGRRK RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|221724884|gb|ACM28040.1| ATP synthase F1, epsilon subunit [Agrobacterium radiobacter K84]
          Length = 135

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 73  NFVL--PYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YF 129
           NF L  P    LS + +D V++PAS G+M V+  H PT+  +KPGV+ VH  +  K+ Y 
Sbjct: 6   NFELVSPERLLLSEQVID-VVIPASEGEMTVMAHHAPTMTTIKPGVVKVHSASGKKQDYV 64

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           V  GFA I       ++A  A+P++ ++         E  +++++A  +LE AE
Sbjct: 65  VFGGFADILPTGCT-LLAESAIPVEDLNQD-------ELTRRINAAKAELEDAE 110


>gi|225159359|ref|ZP_03725656.1| ATP synthase F1, epsilon subunit [Diplosphaera colitermitum TAV2]
 gi|224802065|gb|EEG20340.1| ATP synthase F1, epsilon subunit [Diplosphaera colitermitum TAV2]
          Length = 135

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 2/89 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P A  + +  +D V++P   G++G+LPGH+P + ++  G L V     T+   
Sbjct: 3   LTLEIITPEA-RVYSDTIDTVVIPTVMGEIGILPGHMPLLTQVSDGELRVTKNGQTEHLI 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDP 158
           VS GFA +  ++V+ ++A  A+   +IDP
Sbjct: 62  VSGGFAQVEGDTVS-VLAEHAIDSAKIDP 89


>gi|229915400|gb|ACQ90745.1| CF1 epsilon subunit of ATP synthase [Oocystis solitaria]
          Length = 135

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + + +I+P +TGQ+G+L  H P I  L  GVL +   N+     +  GFA +  N V  +
Sbjct: 18  QAEEIILPTNTGQIGILKNHAPLITALDIGVLLIRSKNEWTPLALMGGFALVKQNQVT-V 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +  EA   + IDP   ++      +KL  A    +K EA
Sbjct: 77  LVNEAESAETIDPQQAEEAFLSAKEKLEQAEGQKQKVEA 115


>gi|359785631|ref|ZP_09288778.1| F0F1 ATP synthase subunit epsilon [Halomonas sp. GFAJ-1]
 gi|359296864|gb|EHK61105.1| F0F1 ATP synthase subunit epsilon [Halomonas sp. GFAJ-1]
          Length = 142

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGND 124
           + +  T N V   AS  S K V+ V+     G +G+LPGHVP + EL+PG +  +HD   
Sbjct: 1   MANSFTCNIVSAEASIFSGK-VEQVVASGVMGDLGILPGHVPLLTELQPGPIRVIHDDGK 59

Query: 125 TKKYFVSSGF 134
            + +FVS GF
Sbjct: 60  EENFFVSGGF 69


>gi|417646903|ref|ZP_12296755.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU144]
 gi|329726163|gb|EGG62635.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU144]
          Length = 134

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 16/131 (12%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L +N V P  S    ++V+M ++  + G+MG++ GH+PT+A LK G + V  H+GN+   
Sbjct: 4   LRLNIVTPNGSVYEREDVEMAVLQTTAGEMGIMYGHIPTVAALKTGHVKVNFHNGNE--- 60

Query: 128 YFVSSGFAFIHANSVA-DIIAVEAVPIDQIDPSLVQ--KGLAEF-------NQKLSSATT 177
            F++    FI A      II   A P  +ID    +  K  AE        N +L+ A  
Sbjct: 61  -FIAVSDGFIEARQHQLSIIVQTAEPASEIDVERAKLAKSRAESHLEDDDDNTELNRAKR 119

Query: 178 DLEKAEAQIGV 188
            LE+A  ++ V
Sbjct: 120 ALERANNRLRV 130


>gi|381210954|ref|ZP_09918025.1| H(+)-transporting ATP synthase epsilon chain [Lentibacillus sp.
           Grbi]
          Length = 131

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV+ V P    L     DMV   A  G++G+LPGH+P +A L    + +   NDTK   
Sbjct: 4   LTVSVVTPDGPVLE-DSFDMVSCKAENGELGILPGHIPMVAPLTISSVRLKLENDTKNLA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VS GF  +  + V  +      P D ID    Q+      ++L S   D++   A++   
Sbjct: 63  VSGGFLEVRPDEVTILAQTAEKPAD-IDVERAQEAKQRAERRLQSKQDDIDFQRAEL--- 118

Query: 190 VHSALNSALT 199
              ALN A+ 
Sbjct: 119 ---ALNRAMN 125


>gi|417763262|ref|ZP_12411242.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           2002000624]
 gi|417773921|ref|ZP_12421796.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           2002000621]
 gi|418673494|ref|ZP_13234813.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           2002000623]
 gi|409940962|gb|EKN86599.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           2002000624]
 gi|410576392|gb|EKQ39399.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           2002000621]
 gi|410579549|gb|EKQ47391.1| ATP synthase F1, epsilon subunit [Leptospira interrogans str.
           2002000623]
          Length = 127

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD +IVP S G  G+LP H P +A L  G+L +  G   K 
Sbjct: 4   NKLKVSVISPEKI-LYKGEVDSLIVPGSEGFFGILPDHAPLVATLGIGILEIRKGEKLKV 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
             V  GF  I  NS++ I+       + ID  + +K LAE
Sbjct: 63  LSVEGGFVEIKDNSIS-ILTDHGALKEDIDLEVEKKNLAE 101


>gi|146278236|ref|YP_001168395.1| F0F1 ATP synthase subunit epsilon [Rhodobacter sphaeroides ATCC
           17025]
 gi|166222487|sp|A4WUM6.1|ATPE_RHOS5 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|145556477|gb|ABP71090.1| ATP synthase F1, epsilon subunit [Rhodobacter sphaeroides ATCC
           17025]
          Length = 132

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           V VP + G M  + GH PTI  L+PG+L     +  + Y V+ GFA I+A S++ ++A +
Sbjct: 24  VQVPGTDGDMTAMEGHAPTITTLRPGILRAQGPSGVQAYAVTGGFAEINATSIS-VLAEK 82

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSA 175
           AV ++++  +++ + +AE  + +S A
Sbjct: 83  AVAVEELTGTVLDEFIAEARELVSVA 108


>gi|223043962|ref|ZP_03614003.1| ATP synthase F1, epsilon subunit [Staphylococcus capitis SK14]
 gi|417906659|ref|ZP_12550440.1| ATP synthase F1, epsilon subunit [Staphylococcus capitis VCU116]
 gi|222442677|gb|EEE48781.1| ATP synthase F1, epsilon subunit [Staphylococcus capitis SK14]
 gi|341597661|gb|EGS40207.1| ATP synthase F1, epsilon subunit [Staphylococcus capitis VCU116]
          Length = 134

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L++N V P  S    ++V++ ++  + G+MG++ GH+PT+A LK G + V  H+GN+   
Sbjct: 4   LSLNIVTPNGSVYEREDVELAVLQTTAGEMGIMSGHIPTVAALKTGYVKVNFHNGNE--- 60

Query: 128 YF-VSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           Y  VS GF  +  + ++ I+  A  A  ID ++ + + K  AE + +     +D+ +A+
Sbjct: 61  YVAVSDGFVEVRQHKLSIIVQTAETASEID-VERAKLAKSRAESHLEDDDDNSDINRAK 118


>gi|220927117|ref|YP_002502419.1| F0F1 ATP synthase subunit epsilon [Methylobacterium nodulans ORS
           2060]
 gi|219951724|gb|ACL62116.1| ATP synthase F1, epsilon subunit [Methylobacterium nodulans ORS
           2060]
          Length = 133

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 13/101 (12%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKKYFVSSGFAFIHANSVADI 145
           VD V +P S G+M VLPGH P +  LK GVL + +G    K+  V  GFA I+A  +  +
Sbjct: 20  VDAVQLPGSEGEMTVLPGHAPVLTTLKTGVLVITEGPQHGKRVLVRGGFAEINATGLT-V 78

Query: 146 IAVEAVPIDQ-----IDPSLVQKGLAEFNQKLSSATTDLEK 181
           IA  A P+++     ID  ++    AE ++    AT DL+K
Sbjct: 79  IAERATPVEELTSESIDAEIIA---AETHR---DATDDLDK 113


>gi|374411763|gb|AEZ48867.1| ATP synthase CF1 epsilon subunit [Abolboda macrostachya]
          Length = 136

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P  TG++GVLP H+P +  +  GVL +   +      +  GFA I  N +  I
Sbjct: 18  EVKEIILPTDTGEIGVLPNHIPIVTAVDIGVLKIRCNDQWLTIALMGGFARISNNEIT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +A +A     IDP        E  Q L  A T+L KAE +
Sbjct: 77  LAYDAQISTDIDPQ-------EAQQALEIAETNLSKAEGK 109


>gi|259415771|ref|ZP_05739691.1| ATP synthase F1, epsilon subunit [Silicibacter sp. TrichCH4B]
 gi|259347210|gb|EEW58987.1| ATP synthase F1, epsilon subunit [Silicibacter sp. TrichCH4B]
          Length = 137

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +  + V P  S L++ +   V +P S G M  +P H PT+  L+PG+L V     T +Y 
Sbjct: 5   MQFDLVSPERS-LASLQARAVQIPGSEGDMTAMPLHAPTLTTLRPGILKVEAPEGTTEYL 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V+ GFA I A  ++ ++A  A+P+D++  + + + + E      +A  D
Sbjct: 64  VTGGFAQITAEGLS-VLAERAIPMDEMTRAHLDELIEEARAMYKTAKDD 111


>gi|339251848|ref|XP_003372946.1| putative ATP synthase F1, epsilon subunit [Trichinella spiralis]
 gi|316968689|gb|EFV52942.1| putative ATP synthase F1, epsilon subunit [Trichinella spiralis]
          Length = 107

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 18/114 (15%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           +  V VP   G++G+ P HVP I  LKPGV+ V++ +  +K+FVSSG   I+ +S     
Sbjct: 7   IKQVSVPTIDGEVGIYPNHVPLIGVLKPGVMRVYEQDMIRKFFVSSGTVSINEDS----- 61

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ--IGVDVHSALNSAL 198
           +V+A           + GL +   +     TD EKA A+  I V+V+ AL  A 
Sbjct: 62  SVQA----------CESGLEKMKSQSHGGATD-EKAAAENAIAVEVYEALVQAC 104


>gi|242371593|ref|ZP_04817167.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F
           family ATPase epsilon subunit [Staphylococcus
           epidermidis M23864:W1]
 gi|242350660|gb|EES42261.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F
           family ATPase epsilon subunit [Staphylococcus
           epidermidis M23864:W1]
          Length = 134

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 66/118 (55%), Gaps = 7/118 (5%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L++N V P  S    ++V++ ++  + G+MG++ GH+PT+A LK G + V  H+GN+   
Sbjct: 4   LSLNIVTPNGSVYDREDVELAVLQTTAGEMGIMSGHIPTVAALKTGYVKVNFHNGNE--- 60

Query: 128 YF-VSSGFAFIHANSVADII-AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           Y  VS GF  +  + ++ I+   EA     ++ + + K  AE + +     +D+ +A+
Sbjct: 61  YVAVSDGFVEVRQHKLSIIVQTAEAANEIDVERAKLAKSRAESHLENDDDNSDINRAK 118


>gi|402773894|ref|YP_006593431.1| ATP synthase subunit epsilon [Methylocystis sp. SC2]
 gi|401775914|emb|CCJ08780.1| ATP synthase epsilon chain [Methylocystis sp. SC2]
          Length = 133

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKKYFVSSGFAFIHAN 140
           L + EV+ V+ P + GQ  VL  H P +  LK GV++V  G    +K FV  GFA ++A+
Sbjct: 15  LFSGEVESVVAPGADGQFTVLKDHAPVMTTLKAGVVTVAGGEGKVEKLFVRGGFADVNAS 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
               I+A +A+P+ +ID + V   +    + ++ A +D
Sbjct: 75  GFT-ILAEQAIPLSEIDVAKVDADIRNAREDIADAKSD 111


>gi|116073665|ref|ZP_01470927.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. RS9916]
 gi|116068970|gb|EAU74722.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. RS9916]
          Length = 133

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 19/101 (18%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           D VI+P++TGQ+G+LPGHV  +A L  GVL V + N  +   +  GFA + ++ V  ++ 
Sbjct: 20  DEVILPSTTGQLGILPGHVSLLAALDVGVLRVRNNNGWQSIALMGGFAEVESDDVTVLVN 79

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAEAQI 186
                             AE    + S+T   +LEKA+A++
Sbjct: 80  A-----------------AELGSGIDSSTAEAELEKAKAEV 103


>gi|418323273|ref|ZP_12934554.1| ATP synthase F1, epsilon subunit [Staphylococcus pettenkoferi
           VCU012]
 gi|365229920|gb|EHM71044.1| ATP synthase F1, epsilon subunit [Staphylococcus pettenkoferi
           VCU012]
          Length = 135

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L++N V P  S    ++V++ ++  + G+MGV+ GH+PT+A L  G + V+  N ++   
Sbjct: 5   LSLNIVTPNGSVYEREDVELAVLKTTAGEMGVMHGHIPTVAALNIGHVKVNFANGSEYIA 64

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA--TTDLEKAE 183
           VS GF  I  + ++ II   A P  +ID +  +   +     LSS    +D+ +A+
Sbjct: 65  VSEGFVEIRQHKLS-IIVQTAEPATEIDVARAELAKSRAESHLSSEDDNSDIYRAK 119


>gi|254466359|ref|ZP_05079770.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium Y4I]
 gi|206687267|gb|EDZ47749.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium Y4I]
          Length = 137

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ +V  V +P + G M  +P H PTI  L+PGVL V       +Y V+ GFA I  +S
Sbjct: 16  LASLQVSAVQIPGAEGDMTAMPSHAPTITTLRPGVLKVESPEGNAEYLVTGGFAEIAGDS 75

Query: 142 VADIIAVEAVPIDQI 156
           ++ ++A  A+P+ ++
Sbjct: 76  LS-VLAERAIPMTEM 89


>gi|23100429|ref|NP_693896.1| H(+)-transporting ATP synthase epsilon chain [Oceanobacillus
           iheyensis HTE831]
 gi|60389792|sp|Q8EM84.1|ATPE_OCEIH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|22778662|dbj|BAC14930.1| H(+)-transporting ATP synthase epsilon chain [Oceanobacillus
           iheyensis HTE831]
          Length = 131

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           +MV+  A TG++G+LPGH+P ++ L+   + +  GNDTK   +S GF  +    V  I+A
Sbjct: 21  EMVVCKAETGEIGILPGHIPLVSPLQISAVRLKKGNDTKYLAISGGFMEVQPEKVT-ILA 79

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
             A     I+    ++      ++L +   +++K  A++ +
Sbjct: 80  QSAETASDINVQRAKEAKDRAERRLQAKKDNIDKTRAELAL 120


>gi|70725934|ref|YP_252848.1| ATP synthase F0F1 subunit epsilon [Staphylococcus haemolyticus
           JCSC1435]
 gi|82592638|sp|Q4L7Y3.1|ATPE_STAHJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|68446658|dbj|BAE04242.1| FoF1-ATP synthase epsilon subunit [Staphylococcus haemolyticus
           JCSC1435]
          Length = 133

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S + ++ V P  S     +V++V+   + G+MGV+ GH+PT+A LK G + V+  N T+ 
Sbjct: 2   STVNLDIVTPNGSVYEKDDVELVVFQTTAGEMGVMSGHIPTVAALKTGHVKVNFRNGTEY 61

Query: 128 YFVSSGFAFIHANSVADII 146
             VS GF  I  + V+ I+
Sbjct: 62  IAVSGGFVEIRQHKVSVIV 80


>gi|365898840|ref|ZP_09436772.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3843]
 gi|365420330|emb|CCE09314.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3843]
          Length = 135

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 2/98 (2%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +VD V VP   G  GVL GH P +A L+PG+L+V  GN  +K  V+ G A +    +  +
Sbjct: 19  QVDQVDVPGLEGDFGVLAGHAPFVAALRPGILTVTTGNTREKIIVAGGLAEVSEKGLT-V 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD-LEKA 182
           +A  A  + ++D + +   +A+   KL+    D L++A
Sbjct: 78  LADIATSLAELDRTALADEIAKMEAKLAEKEGDELDRA 115


>gi|373851825|ref|ZP_09594625.1| ATP synthase epsilon chain [Opitutaceae bacterium TAV5]
 gi|391230381|ref|ZP_10266587.1| ATP synthase, F1 epsilon subunit [Opitutaceae bacterium TAV1]
 gi|372474054|gb|EHP34064.1| ATP synthase epsilon chain [Opitutaceae bacterium TAV5]
 gi|391220042|gb|EIP98462.1| ATP synthase, F1 epsilon subunit [Opitutaceae bacterium TAV1]
          Length = 135

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P A  + +  +D V++P   G++G+LPGH+P + ++  G L V      +   
Sbjct: 3   LTLEIITPEAR-VYSDTIDTVVIPTVMGEVGILPGHMPLLTQVADGELRVTKDGKEQHLI 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           VS GFA +  ++V+ I+A  A+  ++ID    ++ +    + L +
Sbjct: 62  VSGGFAQVEGDTVS-ILAENAITAEKIDTRAAEEAMKRAEEALKN 105


>gi|429210950|ref|ZP_19202116.1| F0F1 ATP synthase subunit epsilon [Pseudomonas sp. M1]
 gi|428158364|gb|EKX04911.1| F0F1 ATP synthase subunit epsilon [Pseudomonas sp. M1]
          Length = 141

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
           +E+ +  V+MV+   S G +G+ PGH P I ELKPG +  V  G + + Y++S GF  + 
Sbjct: 14  AEIFSGLVEMVVAHGSLGDLGIAPGHAPLITELKPGPIRVVKQGGEQEVYYISGGFLEVQ 73

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
            N V  ++A   +    +D +  Q  L E  + L +   + +
Sbjct: 74  PNMV-KVLADTVIRAGDLDEAAAQTALKEAEKALHAKGAEFD 114


>gi|421098173|ref|ZP_15558845.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200901122]
 gi|410798725|gb|EKS00813.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200901122]
          Length = 127

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 6/122 (4%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  G+L +  G   K 
Sbjct: 4   NKLNVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGILEIRKGEKLKV 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEA 184
             +  GF  +  NS++ I+       + ID  + +K LAE  +KLS   S    L+K + 
Sbjct: 63  LSIEGGFIEVKENSIS-ILTDHGALKEDIDVEVEKKALAE-AEKLSPSDSKNLLLQKTKT 120

Query: 185 QI 186
           +I
Sbjct: 121 RI 122


>gi|237744079|ref|ZP_04574560.1| H+-transporting two-sector ATPase [Fusobacterium sp. 7_1]
 gi|229431308|gb|EEO41520.1| H+-transporting two-sector ATPase [Fusobacterium sp. 7_1]
          Length = 134

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +      K+  YF+S GF    +N+ A +IA E +P
Sbjct: 28  SEGDIGILPNHAPYVAELAMGKMEIESPEKDKRDVYFLSGGF-IEFSNNQATVIADEILP 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           I++ID    Q+ + E  ++L   + + E
Sbjct: 87  IEKIDIETEQEKIEELKKQLEKVSVEEE 114


>gi|315497309|ref|YP_004086113.1| ATPase, f1 complex, delta/epsilon subunit-like protein
           [Asticcacaulis excentricus CB 48]
 gi|315415321|gb|ADU11962.1| ATPase, F1 complex, delta/epsilon subunit-like protein
           [Asticcacaulis excentricus CB 48]
          Length = 91

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL V+ V P   EL A +VD VI P S G+ GVL GH P +  L  G +++ +G+  
Sbjct: 1   MADKLHVSLVTP-EKELFAGDVDQVIAPGSEGEFGVLAGHAPLMTTLTEGTVTILNGDQK 59

Query: 126 KKYFVSSGFAFIHANSV 142
           + + V  GFA ++A  +
Sbjct: 60  RMFQVIGGFADVNAEGI 76


>gi|398377033|ref|ZP_10535212.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. AP16]
 gi|397727234|gb|EJK87661.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. AP16]
          Length = 135

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 12/114 (10%)

Query: 73  NFVL--PYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YF 129
           NF L  P    LS + +D V++PAS G+M V+  H PT+  +KPGV+ VH  +  K+ Y 
Sbjct: 6   NFELVSPERLLLSEQVID-VVIPASEGEMTVMAHHAPTMTTIKPGVVKVHSASGKKQDYV 64

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           V  GFA I       ++A  A+P++ ++         E  ++++ A  +LE AE
Sbjct: 65  VFGGFADILPTGCT-LLAESAIPVEDLNQD-------ELTRRINVAKAELEDAE 110


>gi|399219058|emb|CCF75945.1| unnamed protein product [Babesia microti strain RI]
          Length = 86

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%)

Query: 54  VYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELK 113
           +Y+T   +  +   +KL V    PY S L++     V +P   G   +  GH P I++LK
Sbjct: 1   MYVTRILRFASGTVNKLLVTLATPYESCLNSVTAKSVTLPGQEGYFTLTAGHCPLISQLK 60

Query: 114 PGVLSVHDGNDTKKYFVSSGFAFIHA 139
           PGV +V      +K+F+S GFAF  A
Sbjct: 61  PGVATVVTETGDQKFFISGGFAFYKA 86


>gi|350535617|ref|NP_001232204.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
 gi|197127890|gb|ACH44388.1| putative ATP synthase H+ transporting mitochondrial F1 complex
           delta subunit [Taeniopygia guttata]
          Length = 143

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 63  PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-- 120
           P   P+ +   F  P     +   V  V VP  TG  G+L  HVPT+  L+PGV++VH  
Sbjct: 29  PAGGPAAMAFTFASPTQVFYNGANVKQVDVPTLTGSFGILASHVPTLQVLRPGVVTVHAE 88

Query: 121 DGNDTKKYFVSSGFAFIH 138
           DG  T KYFVSSG   +H
Sbjct: 89  DGTAT-KYFVSSGSVSVH 105


>gi|258541223|ref|YP_003186656.1| ATP synthase F1 subunit epsilon [Acetobacter pasteurianus IFO
           3283-01]
 gi|384041144|ref|YP_005479888.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-12]
 gi|384049659|ref|YP_005476722.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-03]
 gi|384052769|ref|YP_005485863.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-07]
 gi|384056001|ref|YP_005488668.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-22]
 gi|384058642|ref|YP_005497770.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-26]
 gi|384061936|ref|YP_005482578.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-32]
 gi|384118012|ref|YP_005500636.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|421849281|ref|ZP_16282263.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus NBRC
           101655]
 gi|421853082|ref|ZP_16285762.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus subsp.
           pasteurianus LMG 1262 = NBRC 106471]
 gi|256632301|dbj|BAH98276.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635358|dbj|BAI01327.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638413|dbj|BAI04375.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-07]
 gi|256641467|dbj|BAI07422.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-22]
 gi|256644522|dbj|BAI10470.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-26]
 gi|256647577|dbj|BAI13518.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-32]
 gi|256650630|dbj|BAI16564.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653621|dbj|BAI19548.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus IFO
           3283-12]
 gi|371459919|dbj|GAB27466.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus NBRC
           101655]
 gi|371478659|dbj|GAB30965.1| ATP synthase F1 epsilon subunit [Acetobacter pasteurianus subsp.
           pasteurianus LMG 1262 = NBRC 106471]
          Length = 136

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 6/110 (5%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHAN 140
           L ++EVDM ++P   G +  +P   P +  L+ GV++++DG+  K +YFV  GFA I   
Sbjct: 14  LVSREVDMAVLPGMEGDIAAMPERAPMMLLLRGGVVALYDGDTVKDRYFVGGGFADITPT 73

Query: 141 SVADIIAVEAVPIDQ--IDPSLVQ-KGLAE-FNQKLSSATTDLEKAEAQI 186
               ++A +AVP+ +  ID +  Q + L+E ++Q   + TT L   + QI
Sbjct: 74  RCT-VLADKAVPVSEISIDNATAQLEALSEAWDQADKTDTTRLSVLQDQI 122


>gi|417778470|ref|ZP_12426276.1| ATP synthase F1, epsilon subunit [Leptospira weilii str.
           2006001853]
 gi|410781541|gb|EKR66114.1| ATP synthase F1, epsilon subunit [Leptospira weilii str.
           2006001853]
          Length = 127

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP + G  G+LP H P +A L  GVL +  G   K  
Sbjct: 5   KLNVSVISPEKI-LYKGEVDSLVVPGNEGFFGILPNHAPLVAVLGIGVLEIRKGEKLKVL 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEAQ 185
            V  GF  +  NSV+ I+       D ID    +K LAE  +KLS   S    L+K + +
Sbjct: 64  SVEGGFIEVKENSVS-ILTDHGALKDDIDLEAEKKALAE-AEKLSPSDSKNLLLQKTKTR 121

Query: 186 I 186
           I
Sbjct: 122 I 122


>gi|418721948|ref|ZP_13281119.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str. UI
           09149]
 gi|410741258|gb|EKQ90014.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str. UI
           09149]
          Length = 127

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  GVL +  G   K  
Sbjct: 5   KLNVSVISPERI-LYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKLKNI 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEAQ 185
            V  GF  +  N+V+ I+       + ID    +K LAE  +KLS   S    L+K + +
Sbjct: 64  SVEGGFIEVKDNTVS-ILTDHGALKEDIDIEAEKKALAEV-EKLSPSDSKNLLLQKTKTR 121

Query: 186 I 186
           I
Sbjct: 122 I 122


>gi|390450622|ref|ZP_10236210.1| F0F1 ATP synthase subunit epsilon [Nitratireductor aquibiodomus
           RA22]
 gi|389662169|gb|EIM73748.1| F0F1 ATP synthase subunit epsilon [Nitratireductor aquibiodomus
           RA22]
          Length = 134

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L +++V+ V++P + G++ V+  H PT+  +KPGV++V     T++Y V  GFA I  +S
Sbjct: 16  LVSQDVESVVIPGTEGELTVMATHAPTMTSIKPGVVAVAADGKTERYVVFGGFADILPDS 75

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
              ++A  AV +D I+         +  +++  A  D+E A+
Sbjct: 76  CT-VLAESAVHVDDINRE-------DLARRIQDAREDIEDAK 109


>gi|347733981|ref|ZP_08867034.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. A2]
 gi|347517218|gb|EGY24410.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. A2]
          Length = 134

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 2/111 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  V P    LS K VD V  P   G+ G+LP H+P ++ L  G L    G  T   F
Sbjct: 5   LHLEIVTPDRLVLSEK-VDYVGAPGYEGEFGILPNHIPFLSALNIGSLYYKAGGKTHWIF 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           VS GFA +  N V  ++A  A   + ID    +K      Q+L+ A   L+
Sbjct: 64  VSGGFAEVSDNKVT-VLAESAERAEDIDLERARKARERAEQRLAQAKEKLD 113


>gi|218441979|ref|YP_002380308.1| F0F1 ATP synthase subunit epsilon [Cyanothece sp. PCC 7424]
 gi|226740242|sp|B7KGV3.1|ATPE_CYAP7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|218174707|gb|ACK73440.1| ATP synthase F1, epsilon subunit [Cyanothece sp. PCC 7424]
          Length = 138

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E + +I+P++TGQ+G+L GH P +  L  GV+ V  G D +   V  GFA +  N V  I
Sbjct: 18  EAEEIILPSTTGQLGILSGHAPLLTALNIGVVRVRPGKDWQTIAVMGGFAEVENNEVK-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           +   A    +ID    Q+   E  ++L  A+
Sbjct: 77  LVNGAEAGAKIDKDTAQQEWNEAQKRLDEAS 107


>gi|418738127|ref|ZP_13294523.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410746301|gb|EKQ99208.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 127

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  GVL +  G   K  
Sbjct: 5   KLNVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKLKNI 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEAQ 185
            V  GF  +  N+V+ I+       + ID    +K LAE  +KLS   S    L+K + +
Sbjct: 64  SVEGGFIEVKDNTVS-ILTDHGALKEDIDIEAEKKALAEV-EKLSPSDSKNLLLQKTKTR 121

Query: 186 I 186
           I
Sbjct: 122 I 122


>gi|423451446|ref|ZP_17428299.1| ATP synthase epsilon chain [Bacillus cereus BAG5X1-1]
 gi|423471468|ref|ZP_17448212.1| ATP synthase epsilon chain [Bacillus cereus BAG6O-2]
 gi|423557180|ref|ZP_17533483.1| ATP synthase epsilon chain [Bacillus cereus MC67]
 gi|401145775|gb|EJQ53297.1| ATP synthase epsilon chain [Bacillus cereus BAG5X1-1]
 gi|401193551|gb|EJR00556.1| ATP synthase epsilon chain [Bacillus cereus MC67]
 gi|402431485|gb|EJV63550.1| ATP synthase epsilon chain [Bacillus cereus BAG6O-2]
          Length = 133

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVA 143
           KEV+MV V A +G+MG+LPGH+PT+A LK   + + HDG+ T    VS GF  +  + V 
Sbjct: 18  KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKHDGH-TDYVAVSGGFIEVRPDKVT 76

Query: 144 DIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAE 183
            +++  A   + ID       K  AE   +   A  D  +AE
Sbjct: 77  -VLSSSAEEANHIDIHRANESKRRAEQRMQEKQAHVDFRRAE 117


>gi|218887917|ref|YP_002437238.1| F0F1 ATP synthase subunit epsilon [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|20137564|sp|Q9S5B5.1|ATPE_DESVM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|5811569|dbj|BAA83614.1| F1F0-ATPase epsilon subunit [Desulfovibrio vulgaris]
 gi|218758871|gb|ACL09770.1| ATP synthase F1, epsilon subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 134

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 2/111 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  V P    LS K VD V  P   G+ G+LP H+P ++ L  G L    G  T   F
Sbjct: 5   LHLEIVTPDRLVLSEK-VDYVGAPGYEGEFGILPNHIPFLSALNIGSLYYKAGGKTHWIF 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           VS GFA +  N V  ++A  A   + ID    +K      Q+L+ A   L+
Sbjct: 64  VSGGFAEVSDNKVT-VLAESAERAEDIDLERARKAKERAEQRLAQAKEKLD 113


>gi|78064766|ref|YP_367535.1| ATP synthase F0F1 subunit epsilon [Burkholderia sp. 383]
 gi|107024490|ref|YP_622817.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia AU
           1054]
 gi|115350154|ref|YP_771993.1| F0F1 ATP synthase subunit epsilon [Burkholderia ambifaria AMMD]
 gi|116688131|ref|YP_833754.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia HI2424]
 gi|170699475|ref|ZP_02890518.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria IOP40-10]
 gi|170731478|ref|YP_001763425.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia MC0-3]
 gi|171315825|ref|ZP_02905056.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria MEX-5]
 gi|172059173|ref|YP_001806825.1| F0F1 ATP synthase subunit epsilon [Burkholderia ambifaria MC40-6]
 gi|254246699|ref|ZP_04940020.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Burkholderia cenocepacia PC184]
 gi|402564912|ref|YP_006614257.1| AtpC protein [Burkholderia cepacia GG4]
 gi|421866791|ref|ZP_16298454.1| ATP synthase epsilon chain [Burkholderia cenocepacia H111]
 gi|119361395|sp|Q1BRB1.1|ATPE1_BURCA RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|119361417|sp|Q39KX5.1|ATPE_BURS3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|122324406|sp|Q0BJL4.1|ATPE_BURCM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740228|sp|B1YQL5.1|ATPE_BURA4 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|77965511|gb|ABB06891.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia sp. 383]
 gi|105894679|gb|ABF77844.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           cenocepacia AU 1054]
 gi|115280142|gb|ABI85659.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia ambifaria
           AMMD]
 gi|116646220|gb|ABK06861.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           cenocepacia HI2424]
 gi|124871475|gb|EAY63191.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Burkholderia cenocepacia PC184]
 gi|169814720|gb|ACA89303.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia MC0-3]
 gi|170135624|gb|EDT03909.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria IOP40-10]
 gi|171099014|gb|EDT43799.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria MEX-5]
 gi|171991690|gb|ACB62609.1| ATP synthase F1, epsilon subunit [Burkholderia ambifaria MC40-6]
 gi|358073276|emb|CCE49332.1| ATP synthase epsilon chain [Burkholderia cenocepacia H111]
 gi|402246109|gb|AFQ46563.1| AtpC protein [Burkholderia cepacia GG4]
          Length = 141

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSG 133
           V+    ++ + E   V +P  TG++G+LPGH P I  ++PG + +  +G + +  FV+ G
Sbjct: 8   VVSAEEQIFSGEAKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  ++      + L +A +DL+ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQ 118


>gi|319893053|ref|YP_004149928.1| ATP synthase subunit epsilon [Staphylococcus pseudintermedius
           HKU10-03]
 gi|386318721|ref|YP_006014884.1| ATP synthase F1 subunit epsilon [Staphylococcus pseudintermedius
           ED99]
 gi|317162749|gb|ADV06292.1| ATP synthase epsilon chain [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323463892|gb|ADX76045.1| ATP synthase F1, epsilon subunit [Staphylococcus pseudintermedius
           ED99]
          Length = 134

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT++ V P  S      V++V++  + G+MGV+ GH+PT+  L+ G + V     +    
Sbjct: 4   LTLDIVTPNGSVYKEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDGKSDYIA 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAE 183
           V+ GFA I    V +I+A  A   D ID    +  K  A F  +     TDL +AE
Sbjct: 64  VTEGFAEIRHEKV-NILAQAAESADDIDLERAKSAKQRATFYLEGDRDDTDLRRAE 118


>gi|398332410|ref|ZP_10517115.1| F0F1 ATP synthase subunit epsilon [Leptospira alexanderi serovar
           Manhao 3 str. L 60]
          Length = 137

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  G+L +  G   K 
Sbjct: 4   NKLNVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGILEIRKGEKLKV 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
             V  GF  +  NSV+ I+       + ID    +K LAE  +KLS
Sbjct: 63  LSVEGGFIEVKENSVS-ILTDHGALKEDIDIEAEKKALAE-AEKLS 106


>gi|86359450|ref|YP_471342.1| F0F1 ATP synthase subunit epsilon [Rhizobium etli CFN 42]
 gi|119367767|sp|Q2K3H1.1|ATPE_RHIEC RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|86283552|gb|ABC92615.1| ATP synthase protein, epsilon subunit [Rhizobium etli CFN 42]
          Length = 135

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHAN 140
           L ++ V  V+VPA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V  GFA I   
Sbjct: 16  LLSEMVTEVVVPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKKQDYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
               ++A  AVP++++          E  +++ +A  +LE AE
Sbjct: 76  GCT-LLAESAVPVEELHKD-------ELTRRIEAARKELEHAE 110


>gi|262277908|ref|ZP_06055701.1| ATP synthase F1, epsilon subunit [alpha proteobacterium HIMB114]
 gi|262225011|gb|EEY75470.1| ATP synthase F1, epsilon subunit [alpha proteobacterium HIMB114]
          Length = 127

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 2/108 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + V+ V P     S K++ MV +P   GQMG+L  H+P +  LKPGV+++    +  KYF
Sbjct: 1   MQVDIVTPEKVLFSEKDISMVTIPGIEGQMGILDNHLPVVTFLKPGVINIEKSEN--KYF 58

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
            ++G      N+   I+  E   +       +       N+KL    +
Sbjct: 59  FTTGGVVDFKNNSLSILCQEVFDVKDFSDKQINNLKERANKKLEDTNS 106


>gi|116328612|ref|YP_798332.1| F0F1 ATP synthase subunit epsilon [Leptospira borgpetersenii
           serovar Hardjo-bovis str. L550]
 gi|116331341|ref|YP_801059.1| F0F1 ATP synthase subunit epsilon [Leptospira borgpetersenii
           serovar Hardjo-bovis str. JB197]
 gi|122280913|sp|Q04S19.1|ATPE_LEPBJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|122283601|sp|Q04ZU6.1|ATPE_LEPBL RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|116121356|gb|ABJ79399.1| epsilon subunit of the H(+)-transporting two- sector ATPase, F1
           sector [Leptospira borgpetersenii serovar Hardjo-bovis
           str. L550]
 gi|116125030|gb|ABJ76301.1| epsilon subunit of the H(+)-transporting two- sector ATPase, F1
           sector [Leptospira borgpetersenii serovar Hardjo-bovis
           str. JB197]
          Length = 127

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  GVL +  G   K  
Sbjct: 5   KLNVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKLKNI 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEAQ 185
            V  GF  +  N+V+ I+       + ID    +K LAE  +KLS   S    L+K + +
Sbjct: 64  SVEGGFIEVKDNTVS-ILTDHGALKEDIDIEAEKKALAEV-EKLSPSDSKNLLLQKTKTR 121

Query: 186 I 186
           I
Sbjct: 122 I 122


>gi|409052481|ref|YP_006666439.1| ATP synthase CF1 epsilon subunit (chloroplast) [Trebouxiophyceae
           sp. MX-AZ01]
 gi|402746099|gb|AFQ93794.1| ATP synthase CF1 epsilon subunit (chloroplast) [Trebouxiophyceae
           sp. MX-AZ01]
          Length = 133

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +EV+ +I+P +TGQMGVL  H P +  L  GV+      +     +  GFA +  N V  
Sbjct: 17  QEVEEIILPTNTGQMGVLTNHAPLMTALDVGVMLSRTKTEWTSVALMGGFALVKQNQVT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           ++  EA   + IDP   ++   E   +   A+   +K EA   +
Sbjct: 76  VLVNEAESAESIDPDQAERSYEEAQARWLEASGQKQKVEANFAL 119


>gi|290993003|ref|XP_002679123.1| ATP synthase epsilon subunit [Naegleria gruberi]
 gi|284092738|gb|EFC46379.1| ATP synthase epsilon subunit [Naegleria gruberi]
          Length = 208

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADII 146
           D+ +     G  G+ P H   +  + PG++ + ++   T K+F + GFAF++ +    + 
Sbjct: 91  DISLSTVEFGDYGIFPNHRTQVMRINPGLIKIKYNDEKTVKWFSAGGFAFVYYHGFVQLN 150

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
             EA  +D++D +LV++ + E  ++L  +  +  + +A+IG+++   L S L
Sbjct: 151 LSEAYKLDELDVNLVRREV-EAQKELLKSRDNAVRGQAEIGLELLEPLLSTL 201


>gi|325293990|ref|YP_004279854.1| ATP synthase F0F1 subunit epsilon [Agrobacterium sp. H13-3]
 gi|418409301|ref|ZP_12982614.1| F0F1 ATP synthase subunit epsilon [Agrobacterium tumefaciens 5A]
 gi|325061843|gb|ADY65534.1| F0F1 ATP synthase subunit epsilon [Agrobacterium sp. H13-3]
 gi|358004618|gb|EHJ96946.1| F0F1 ATP synthase subunit epsilon [Agrobacterium tumefaciens 5A]
          Length = 136

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 14/114 (12%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M VL  H PT+  +KPG+++V     +T KY V  GFA I   
Sbjct: 16  LVSETVTEVVIPATLGEMTVLANHAPTMTTIKPGLVTVKFASGETHKYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
               ++A  AV  D + P  +QK +            DL KAE Q G   H  L
Sbjct: 76  GCT-LLAESAVSADDMSPDTLQKRI------------DLAKAEIQEGNHHHEHL 116


>gi|404492562|ref|YP_006716668.1| F0F1 ATP synthase subunit epsilon [Pelobacter carbinolicus DSM
           2380]
 gi|119361398|sp|Q3A604.1|ATPE1_PELCD RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|77544641|gb|ABA88203.1| ATP synthase F1, epsilon subunit [Pelobacter carbinolicus DSM 2380]
          Length = 138

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL +  V P A+++  +EVD +  P S GQ GVLPGH P +  L+ G  S   G+D 
Sbjct: 1   MAQKLKLEMVTP-AAQVLIEEVDEIAAPGSLGQFGVLPGHTPLLTTLQVGEFSYRKGSDV 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVE-AVPIDQIDPSLVQKGLAEFNQKLSSAT 176
             Y+++  + ++       ++ VE A   D ID +  +  L     +L   T
Sbjct: 60  --YYLAVNWGYVEVAEDRVLVLVETAETQDHIDLARAKAALGRAEARLRELT 109


>gi|238917846|ref|YP_002931363.1| F-type H+-transporting ATPase epsilon chain [Eubacterium eligens
           ATCC 27750]
 gi|238873206|gb|ACR72916.1| F-type H+-transporting ATPase epsilon chain [Eubacterium eligens
           ATCC 27750]
          Length = 134

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPID 154
           S G +GV PGH+P  A + P VLS+H+GND KK  V  G   I  + +  I+A  A   D
Sbjct: 31  SEGDIGVYPGHIPLTAVVVPCVLSIHNGNDVKKAAVHGGIIEILKDKIT-ILAEVAEWSD 89

Query: 155 QIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +ID     +      ++L+S  ++L+   A+
Sbjct: 90  EIDVERANEARLRAEKRLASHDSNLDMVRAE 120


>gi|49574600|ref|NP_848066.2| ATP synthase CF1 epsilon subunit [Adiantum capillus-veneris]
 gi|68565052|sp|Q85FL4.2|ATPE_ADICA RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|48476005|gb|AAP29398.2| ATP synthase CF1 epsilon chain (chloroplast) [Adiantum
           capillus-veneris]
          Length = 132

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+  ++GQ+G+LP H P +A L  GVL +          +  GFA I  N V  I
Sbjct: 18  EVREIILSTNSGQIGILPNHAPLLAALDMGVLKIRSDKQWSAMALMGGFAMIDNNRVI-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGL---------AEFNQKLSSATTDLEKAEAQI 186
           +  EA    +IDP   +K           AE  +KL  A    ++A+A++
Sbjct: 77  LVNEAERASEIDPEEARKSFQTAQAELAEAEGRRKLIEANLTFKRAKARL 126


>gi|392970023|ref|ZP_10335432.1| H(+)-transporting two-sector ATPase, epsilon chain [Staphylococcus
           equorum subsp. equorum Mu2]
 gi|403046029|ref|ZP_10901504.1| F0F1 ATP synthase subunit epsilon [Staphylococcus sp. OJ82]
 gi|392511951|emb|CCI58637.1| H(+)-transporting two-sector ATPase, epsilon chain [Staphylococcus
           equorum subsp. equorum Mu2]
 gi|402764191|gb|EJX18278.1| F0F1 ATP synthase subunit epsilon [Staphylococcus sp. OJ82]
          Length = 134

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 10/128 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L++N V P  S  + ++V++ +   + G++GV+ GH+PT+A L+ G + ++  N ++   
Sbjct: 4   LSLNIVTPNGSVNNREDVNLAVFQTTAGEIGVMYGHIPTVAALEIGYVKINFDNGSEYIA 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ--KGLAEF-------NQKLSSATTDLE 180
           VS GF  +  + ++ +I   A P ++ID +  +  K  AE        N  +S A   LE
Sbjct: 64  VSEGFVEVRQDKLS-VIVQTAEPANEIDVARAELAKSRAESHINNEEDNSDISRAKRALE 122

Query: 181 KAEAQIGV 188
           +A  +I V
Sbjct: 123 RANNRIRV 130


>gi|403236562|ref|ZP_10915148.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 10403023]
          Length = 134

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P      A +V+MV   A +G++G+LPGH+P +A L+ G + +  G++T+   
Sbjct: 4   VKVNVVTPDGPVYEA-DVEMVSAKAQSGELGILPGHIPMVAPLQVGAVRLKKGSNTELVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
           VS GF  +  + V  I+A  A   + ID     +      Q+L + T   D ++AE
Sbjct: 63  VSGGFLEVRPDQVT-ILAQAAETAESIDVHRASEAKKRAEQRLQAKTDHVDFKRAE 117


>gi|329114831|ref|ZP_08243588.1| ATP synthase epsilon chain [Acetobacter pomorum DM001]
 gi|326695962|gb|EGE47646.1| ATP synthase epsilon chain [Acetobacter pomorum DM001]
          Length = 136

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 6/110 (5%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHAN 140
           L ++EVDM ++P   G +  +P   P +  L+ G+++++DG+  K +YFV  GFA I   
Sbjct: 14  LVSREVDMAVLPGMEGDIAAMPERAPMMLLLRGGIVALYDGDTVKDRYFVGGGFADITPT 73

Query: 141 SVADIIAVEAVPIDQ--IDPSLVQ-KGLAE-FNQKLSSATTDLEKAEAQI 186
               ++A +AVP+ +  ID +  Q + L+E ++Q   + TT L   + QI
Sbjct: 74  RCT-VLADKAVPVSEISIDNATAQLEALSEAWDQADKTDTTRLSVLQDQI 122


>gi|374249469|ref|YP_005088688.1| atpE gene product [Phaeocystis antarctica]
 gi|340008160|gb|AEK26792.1| ATP synthase CF1 epsilon subunit [Phaeocystis antarctica]
          Length = 132

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           +I+P+STGQ+G+L GH P +  L  GV+ +  G+      +  GFA +  ++V  ++   
Sbjct: 22  IILPSSTGQLGILTGHAPLLTALDIGVMRLKTGSKWTSIVLMEGFAEVEKDTVT-VLCNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           A   D ID +  Q  L +    +  A T  EK EA I
Sbjct: 81  AEEADSIDATTAQADLEKTILLVEEAATKKEKIEATI 117


>gi|410940358|ref|ZP_11372172.1| ATP synthase F1, epsilon subunit [Leptospira noguchii str.
           2006001870]
 gi|410784555|gb|EKR73532.1| ATP synthase F1, epsilon subunit [Leptospira noguchii str.
           2006001870]
          Length = 127

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD +IVP+S G  G+LP H P +A L  GVL +  G+  K 
Sbjct: 4   NKLKVSVISPEKI-LYKGEVDSLIVPSSEGFFGILPDHAPLVATLGIGVLEIRKGDKLKV 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQ 170
             V  GF  +  NS++ I+       + ID  + +K L E  +
Sbjct: 63  LSVEGGFIEVKDNSIS-ILTDHGALKEDIDLEVEKKNLVEVEK 104


>gi|217966569|ref|YP_002352075.1| ATP synthase F1 subunit epsilon [Dictyoglomus turgidum DSM 6724]
 gi|217335668|gb|ACK41461.1| ATP synthase F1, epsilon subunit [Dictyoglomus turgidum DSM 6724]
          Length = 145

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           VD V +P   G +G+LPGHV T+A + PG++    G+      VS GF  I  + +  I+
Sbjct: 26  VDAVSIPLEDGMIGILPGHVNTLARVMPGIIKARSGDKEIILVVSEGFMEITKDKIY-IV 84

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
           A +    ++++  +++K   E   KL+ A    E+ E      +H AL
Sbjct: 85  AEDGELGERLNEDVLKKEEIELKNKLNQAQNYKEREE------LHKAL 126


>gi|116254138|ref|YP_769976.1| F0F1 ATP synthase subunit epsilon [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|424872650|ref|ZP_18296312.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           viciae WSM1455]
 gi|119367768|sp|Q1MAZ3.1|ATPE_RHIL3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|115258786|emb|CAK09892.1| putative ATP synthase epsilon chain [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|393168351|gb|EJC68398.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           viciae WSM1455]
          Length = 135

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V  GFA I   
Sbjct: 16  LLSEMVTEVVIPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKKQDYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
               ++A  AVP++++          E  +++ +A  +LE AE
Sbjct: 76  GCT-LLAESAVPVEELQKD-------ELTRRIEAARQELEHAE 110


>gi|415883754|ref|ZP_11545783.1| F0F1 ATP synthase subunit epsilon [Bacillus methanolicus MGA3]
 gi|387591549|gb|EIJ83866.1| F0F1 ATP synthase subunit epsilon [Bacillus methanolicus MGA3]
          Length = 135

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++G+LPGH+P +A L+ G + +  G  T+   VS GF  +  + V  I
Sbjct: 19  DVEMVSTKAQSGELGILPGHIPMVAPLQIGAVRLKKGGKTEYVAVSGGFLEVRPDQVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +A  A   +QID    ++      ++L +   D
Sbjct: 78  LAQAAETSEQIDVERAKRAKERAEERLRAQNQD 110


>gi|383930397|ref|YP_005089819.1| atpE gene product (chloroplast) [Dunaliella salina]
 gi|246880770|gb|ACS95082.1| ATP synthase CF1 epsilon subunit [Dunaliella salina]
          Length = 135

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + D +++P  TG+MGVL  H P I  L  G + +    +     +  GFA +  N V  I
Sbjct: 18  QADEIVLPTETGEMGVLKNHAPIITGLDVGAMLIRTNQEWTSLAIMGGFALVKQN-VVTI 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +A EA   + IDP        E      +A  +LEKAE 
Sbjct: 77  LANEAQSSENIDPE-------EAKNDFETAKNNLEKAEG 108


>gi|398336237|ref|ZP_10520942.1| F0F1 ATP synthase subunit epsilon [Leptospira kmetyi serovar
           Malaysia str. Bejo-Iso9]
          Length = 127

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP + G  G+LP H P +A L  GVL +  G+  K  
Sbjct: 5   KLNVSVISPEKI-LYKGEVDSLVVPGNEGFFGILPNHAPLVAVLGIGVLEIRKGDKIKAL 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
            V  GF  +  NS++ I+       + ID    +K LAE  +   SA+ +L
Sbjct: 64  SVEGGFIEVKENSIS-ILTDHGALKEDIDLETEKKALAEAEKLPPSASKNL 113


>gi|260780660|ref|YP_003227075.1| ATP synthase CF1 epsilon subunit [Bryopsis hypnoides]
 gi|260176738|gb|ACX33747.1| ATP synthase CF1 epsilon subunit [Bryopsis hypnoides]
          Length = 130

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           ++V+ VI+P +TGQMG+L  H P I  L  GV+ + +  +     +  GFA +  N V  
Sbjct: 17  EQVEEVILPTNTGQMGILSNHAPIITALDIGVMLIRNKKEWNPIVLMGGFALVKQNQVT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           ++  EA     ID +  +K      Q    AT+  +K E
Sbjct: 76  VLVNEAESEKTIDKAEAEKNFITAKQNFEQATSAKQKVE 114


>gi|134294239|ref|YP_001117974.1| F0F1 ATP synthase subunit epsilon [Burkholderia vietnamiensis G4]
 gi|387900865|ref|YP_006331204.1| ATP synthase subunit epsilon [Burkholderia sp. KJ006]
 gi|134137396|gb|ABO53139.1| ATP synthase F1 subcomplex epsilon subunit [Burkholderia
           vietnamiensis G4]
 gi|387575757|gb|AFJ84473.1| ATP synthase epsilon chain [Burkholderia sp. KJ006]
          Length = 141

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSG 133
           V+    ++ + E   V +P  TG++G+LPGH P I  ++PG + +  +G++ +  FV+ G
Sbjct: 8   VVSAEEQIFSGEAKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGSNDEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  +       + L +A +DL+ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGKDLDAAKAEDARKRAEETLQNAKSDLDLAKAQ 118


>gi|354593274|ref|ZP_09011319.1| ATP synthase epsilon chain [Commensalibacter intestini A911]
 gi|353673339|gb|EHD15033.1| ATP synthase epsilon chain [Commensalibacter intestini A911]
          Length = 138

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSV 142
           +++VDM ++P   G +  + GHVP I  L+ GV+ +++GN     +FV SGFA +     
Sbjct: 16  SQQVDMAVLPGLEGDIAAMEGHVPMIFLLRGGVIHLYEGNKIIDSFFVESGFAEMKETQC 75

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEK 181
             ++A E   +D++   +  K LA+       A    D EK
Sbjct: 76  T-VLAKEVKKLDELSEEVATKRLADLEASFQEAAKGNDAEK 115


>gi|98971623|gb|ABF59714.1| ATP synthase protein epsilon subunit [Rhizobium leguminosarum bv.
           trifolii TA1]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V  GFA I   
Sbjct: 16  LLSEMVTEVVIPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKKQDYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
               ++A  AVP++++          E  +++ +A  +LE AE
Sbjct: 76  GCT-LLAESAVPVEELQKD-------ELTRRIEAARLELEHAE 110


>gi|254512354|ref|ZP_05124421.1| ATP synthase F1, epsilon subunit [Rhodobacteraceae bacterium KLH11]
 gi|221536065|gb|EEE39053.1| ATP synthase F1, epsilon subunit [Rhodobacteraceae bacterium KLH11]
          Length = 136

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 2/102 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + + +  + V P  S L++ E   V +P + G M  +P H PTI  L+PG+L V     +
Sbjct: 1   MANTMQFDLVSPERS-LASLEATAVQLPGADGDMTAMPDHAPTITTLRPGLLKVQAPEGS 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
            +Y V+ GFA I+ + ++ ++A +A+P+ ++  S +   +AE
Sbjct: 60  SEYLVTGGFAQINGDGLS-VLAEKAIPVAEVTRSHLDDLIAE 100


>gi|371532801|gb|AEX32524.1| ATP synthase CF1 epsilon subunit [Dunaliella tertiolecta]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + D +++P  TG+MGVL  H P I  L  G + +    +     +  GFA +  N V  I
Sbjct: 18  QADEIVLPTETGEMGVLKNHAPIITGLDVGAMLIRTNQEWTSLAIMGGFALVKQN-VVTI 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +A EA   + IDP        E      +A  +LEKAE 
Sbjct: 77  LANEAQSSENIDPE-------EAKNDFETAKNNLEKAEG 108


>gi|1703741|sp|P50010.1|ATPE_PRODI RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|150559|gb|AAA25557.1| ATP synthase epsilon subunit [Prochloron didemni]
          Length = 136

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 11/111 (9%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHAN------ 140
           V+ +++P++TGQ+GVL GH P +  L  GV+ V  G D +   +  GFA +  N      
Sbjct: 19  VEEIVLPSTTGQVGVLTGHAPLLTALDTGVMRVRPGKDWQAIALMGGFAEVENNEVKVLV 78

Query: 141 ---SVADIIAVEAVPID--QIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
               V D I  E    +  Q + +L +    +  Q+L  AT + +KA A+ 
Sbjct: 79  NGAEVGDSIDKETARTEFQQAEQNLARANQGDNRQELIQATQEFKKARARF 129


>gi|241206623|ref|YP_002977719.1| F0F1 ATP synthase subunit epsilon [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860513|gb|ACS58180.1| ATP synthase F1, epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V  GFA I   
Sbjct: 16  LLSEMVTEVVIPATEGEMTVMANHAPTMTTIKPGVVSVRSASGKKQDYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
               ++A  AVP++++          E  +++ +A  +LE AE
Sbjct: 76  GCT-LLAESAVPVEELHKD-------ELTRRIEAARKELEHAE 110


>gi|78356031|ref|YP_387480.1| ATP synthase F0F1 subunit epsilon [Desulfovibrio alaskensis G20]
 gi|119361428|sp|Q313W1.1|ATPE_DESDG RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|78218436|gb|ABB37785.1| ATP synthase F1, epsilon subunit [Desulfovibrio alaskensis G20]
          Length = 134

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  V P    LS ++VD V  P   G+ GVLP H+P ++ L  G L    G  T+  F
Sbjct: 5   LQLEIVTPDKVVLS-EQVDYVGAPGYEGEFGVLPNHIPFLSALSIGSLYYKAGGKTRYAF 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKG--LAEFNQKLSSATTDLEKAEAQI 186
           VS GFA +  N V  I+A  A   + ID    +K    AE   K      D  +AEA +
Sbjct: 64  VSGGFAEVSDNKVT-ILAESAERAEDIDIERARKAQQRAEERLKAEREKIDATRAEAAL 121


>gi|190893715|ref|YP_001980257.1| F0F1 ATP synthase subunit epsilon [Rhizobium etli CIAT 652]
 gi|226740277|sp|B3PQ67.1|ATPE_RHIE6 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|190698994|gb|ACE93079.1| ATP synthase protein, epsilon subunit [Rhizobium etli CIAT 652]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 10/112 (8%)

Query: 73  NFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFV 130
           NF L     L   E V  V++PA+ G+M V+  H PT+  +KPG++SV  G+  K+ Y V
Sbjct: 6   NFELVSPERLLLSEMVTEVVIPATEGEMTVMAHHAPTMTTIKPGIVSVRSGSGKKQDYVV 65

Query: 131 SSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
             GFA I       ++A  AVP+++++         E  +++ +A  +LE A
Sbjct: 66  FGGFADILPTGCT-LLAESAVPVEELNKD-------ELTRRIEAAKKELEDA 109


>gi|406990228|gb|EKE09907.1| hypothetical protein ACD_16C00100G0069 [uncultured bacterium]
          Length = 138

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHAN 140
           L  K+V MV++P   G +GVL  H P +  L+PGV+ +++G+D   + FV  GF+ I   
Sbjct: 15  LFKKDVSMVVIPGLEGDIGVLSNHAPLLTVLRPGVVRIYEGSDILLRIFVDGGFSEITPQ 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSA 193
               ++  E   ++ +D S ++  +    + +  + T  E+ +    +DV  A
Sbjct: 75  KCTALVT-EGTSLEALDKSTLEMEIQNLLEDIEESKTKEEREQVGEVLDVARA 126


>gi|99081925|ref|YP_614079.1| ATP synthase F0F1 subunit epsilon [Ruegeria sp. TM1040]
 gi|119367787|sp|Q1GEU9.1|ATPE_SILST RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|99038205|gb|ABF64817.1| ATP synthase F1 epsilon subunit [Ruegeria sp. TM1040]
          Length = 137

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +  + V P  S L++ +   V +P + G M  +P H PT+  L+PG+L V     T +Y 
Sbjct: 5   MQFDLVSPERS-LASLQARAVQIPGAEGDMTAMPLHAPTLTTLRPGILKVDAPEGTTEYL 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V+ GFA I A  ++ ++A  A+P+D++  + + + + E      +A  D
Sbjct: 64  VTGGFAQITAEGLS-VLAERAIPMDEMTRAHLDELIEEARTMYKTAQED 111


>gi|269837449|ref|YP_003319677.1| ATP synthase F1 subunit epsilon [Sphaerobacter thermophilus DSM
           20745]
 gi|269786712|gb|ACZ38855.1| ATP synthase F1, epsilon subunit [Sphaerobacter thermophilus DSM
           20745]
          Length = 149

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 3/121 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL+V  V          +VDMV+VP + G +G+LP H P I+ L  G + V  G+  + 
Sbjct: 2   AKLSVEVVTGERVVFQEDDVDMVVVPGADGTLGILPRHAPLISLLSFGEMRVIKGSQEQS 61

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAEAQ 185
             +  GF  +  N V  ++A  A   ++ID +  +  +  AE   + S A  DL +AEA 
Sbjct: 62  LAIFGGFVEVAHNRVR-VLADTAERAEEIDLARAEEARKRAEARLERSRADVDLIRAEAA 120

Query: 186 I 186
           +
Sbjct: 121 L 121


>gi|339445584|ref|YP_004711588.1| F0F1-type ATP synthase epsilon subunit [Eggerthella sp. YY7918]
 gi|338905336|dbj|BAK45187.1| F0F1-type ATP synthase epsilon subunit [Eggerthella sp. YY7918]
          Length = 136

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L ++E ++V+VP   G+MG L GH   ++ L  G   V   +G D K+Y +  G+  +  
Sbjct: 15  LVSEEAELVVVPGVEGEMGFLKGHASLVSVLADGEARVKPAEGGDVKRYALQGGYVEVGG 74

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           + V  I+A  A+   +ID + V+  LA   +KLSS
Sbjct: 75  DKVI-ILADRALLSSEIDAAAVRAELATIEEKLSS 108


>gi|410461698|ref|ZP_11315345.1| ATP synthase F1 subunit epsilon [Bacillus azotoformans LMG 9581]
 gi|409925634|gb|EKN62843.1| ATP synthase F1 subunit epsilon [Bacillus azotoformans LMG 9581]
          Length = 133

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV V A +G++G+LPGH+P +A L    + + +GN+T K  VS GF  +    V  I
Sbjct: 19  DVEMVSVKAVSGELGILPGHIPLVAPLTISAVRLKNGNNTDKVAVSGGFVEVRPEKVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +A  A     ID    +       ++L  A TD
Sbjct: 78  LAQAAELATSIDIDRARAAKERAERRLQQAKTD 110


>gi|161523287|ref|YP_001578299.1| F0F1 ATP synthase subunit epsilon [Burkholderia multivorans ATCC
           17616]
 gi|189351940|ref|YP_001947568.1| F0F1 ATP synthase subunit epsilon [Burkholderia multivorans ATCC
           17616]
 gi|221214287|ref|ZP_03587259.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD1]
 gi|421470095|ref|ZP_15918502.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans ATCC
           BAA-247]
 gi|421477535|ref|ZP_15925355.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CF2]
 gi|226740230|sp|A9AJG5.1|ATPE_BURM1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|160340716|gb|ABX13802.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans ATCC
           17616]
 gi|189335962|dbj|BAG45032.1| F-type H+-transporting ATPase epsilon chain [Burkholderia
           multivorans ATCC 17616]
 gi|221165942|gb|EED98416.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CGD1]
 gi|400226390|gb|EJO56468.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans CF2]
 gi|400228513|gb|EJO58442.1| ATP synthase F1, epsilon subunit [Burkholderia multivorans ATCC
           BAA-247]
          Length = 141

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSG 133
           V+    ++ + E   V +P  TG++G+LPGH P I  ++PG + +  +G   +  FV+ G
Sbjct: 8   VVSAEEQIFSGEAKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGSDEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  ++      + L +A +DL+ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQ 118


>gi|254447549|ref|ZP_05061015.1| ATP synthase F1, epsilon subunit [gamma proteobacterium HTCC5015]
 gi|198262892|gb|EDY87171.1| ATP synthase F1, epsilon subunit [gamma proteobacterium HTCC5015]
          Length = 131

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 2/104 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIH 138
           +EL + EV +++ P + G++G+ P H P +  LKPG + +  DG + +  FVS G+  + 
Sbjct: 8   TELFSGEVSLLVAPGAQGELGIKPKHAPLLTNLKPGEVRIKRDGQEDENIFVSGGYLEVQ 67

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
            N V  I+A  AV    ID +   +      + L++  +D++ A
Sbjct: 68  PNVVT-ILADTAVRAHDIDEAAAIEAKQRAEEALANRKSDMDVA 110


>gi|387928412|ref|ZP_10131090.1| F0F1 ATP synthase subunit epsilon [Bacillus methanolicus PB1]
 gi|387587998|gb|EIJ80320.1| F0F1 ATP synthase subunit epsilon [Bacillus methanolicus PB1]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 4/101 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++G+LPGH+P +A L+ G + +  G  T+   VS GF  +  + V  I
Sbjct: 19  DVEMVSTKAQSGELGILPGHIPIVAPLQIGAVRLKKGGKTEYVAVSGGFLEVRPDQVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKL---SSATTDLEKAE 183
           +A  A   +QID    ++      ++L   +    D ++AE
Sbjct: 78  LAQAAETSEQIDVERAKRAKERAEERLRAQNKGDIDFKRAE 118


>gi|260494336|ref|ZP_05814467.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 3_1_33]
 gi|422933269|ref|ZP_16966191.1| ATP synthase F1 sector epsilon subunit [Fusobacterium nucleatum
           subsp. animalis ATCC 51191]
 gi|423137131|ref|ZP_17124774.1| ATP synthase epsilon chain [Fusobacterium nucleatum subsp. animalis
           F0419]
 gi|260198482|gb|EEW95998.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 3_1_33]
 gi|339891285|gb|EGQ80286.1| ATP synthase F1 sector epsilon subunit [Fusobacterium nucleatum
           subsp. animalis ATCC 51191]
 gi|371960607|gb|EHO78258.1| ATP synthase epsilon chain [Fusobacterium nucleatum subsp. animalis
           F0419]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +      K+  YF+S GF    +N+ A +IA E +P
Sbjct: 28  SEGDIGILPNHAPYVAELAMGKMEIESPEKDKRDVYFLSGGF-IEFSNNQATVIADEILP 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           I++ID    Q  + E  ++L   + + E
Sbjct: 87  IEKIDIETEQAKIEELKKQLEKVSVEEE 114


>gi|378827725|ref|YP_005190457.1| ATP synthase subunit epsilon [Sinorhizobium fredii HH103]
 gi|365180777|emb|CCE97632.1| ATP synthase epsilon chain [Sinorhizobium fredii HH103]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 7/107 (6%)

Query: 73  NFVL--PYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKY 128
           NF L  P    LSA+ V  V++PA+ G+M V+  H PT+  +KPGV++V   DG  T+++
Sbjct: 6   NFELVSPERLLLSAQ-VTEVVIPATEGEMTVMANHAPTMTTIKPGVVTVKTADGK-TERF 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
            V  GFA I       ++A  AV +D++D ++++  + E   +L  A
Sbjct: 64  AVFGGFADILPTGCT-LLAESAVHVDELDRTVLENRIDEARAELEGA 109


>gi|359788689|ref|ZP_09291660.1| F0F1 ATP synthase subunit epsilon [Mesorhizobium alhagi CCNWXJ12-2]
 gi|359255481|gb|EHK58391.1| F0F1 ATP synthase subunit epsilon [Mesorhizobium alhagi CCNWXJ12-2]
          Length = 132

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 2/105 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKYFVSSGFAFIHAN 140
           L +++V+ V++P + G+M VL  H P +  +KPGV++V   G   ++Y V  GFA I   
Sbjct: 16  LVSEQVEHVVIPGAEGEMTVLANHSPVMTTVKPGVVTVKSAGGGEERYVVFGGFADILPE 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
               ++A  AV + +ID   + + + E  +  + A +D E+  A+
Sbjct: 76  GCT-LLAESAVRVAEIDRDDLARRIQEAREDAADAKSDDERTRAE 119


>gi|11465726|ref|NP_053870.1| ATP synthase CF1 epsilon subunit [Porphyra purpurea]
 gi|1703740|sp|P51260.1|ATPE_PORPU RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|1276726|gb|AAC08146.1| ATP synthase CF1 epsilon chain (chloroplast) [Porphyra purpurea]
          Length = 134

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E   +I+P+STGQ+G+L GH P +  L  GV+ V    +     +  GFA I  N +  I
Sbjct: 18  EAQEIILPSSTGQLGILTGHAPLLTALDIGVMRVRVDKEWMPIVLLGGFAEIENNQLT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +   A    QID    +K L    Q L+ A++  EK EA
Sbjct: 77  LVNGAEEASQIDLVEAEKNLDTATQLLNDASSSKEKIEA 115


>gi|398342521|ref|ZP_10527224.1| F0F1 ATP synthase subunit epsilon [Leptospira inadai serovar Lyme
           str. 10]
          Length = 127

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KLTV+ + P    L   + D +IVP S G  GVLPGH   ++ L  GVL +  GN TK  
Sbjct: 5   KLTVSVISP-EKLLYTGDADSLIVPGSEGFFGVLPGHTSLVSLLGIGVLEIRQGNKTKIA 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
            +  GF  I  N+V  I+       ++ID    +K L +
Sbjct: 64  VIEGGFFEIRNNNVT-ILTDHGSLKEEIDLEAAKKALED 101


>gi|407975152|ref|ZP_11156058.1| F0F1 ATP synthase subunit epsilon [Nitratireductor indicus C115]
 gi|407429237|gb|EKF41915.1| F0F1 ATP synthase subunit epsilon [Nitratireductor indicus C115]
          Length = 135

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++EV+ V++P + G++ V+  H PT+  +KPGVL+V   G  T++Y V  GFA I   
Sbjct: 16  LVSQEVESVVIPGTEGELTVMANHAPTMTSVKPGVLTVKAAGGGTERYVVFGGFADILPE 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
               ++A  AV +D I+    ++ LA   Q       D E  E ++
Sbjct: 76  GCT-VLAESAVHVDDIN----REDLARRIQDAREDVADAEDHETRL 116


>gi|289550282|ref|YP_003471186.1| ATP synthase subunit epsilon [Staphylococcus lugdunensis HKU09-01]
 gi|315660258|ref|ZP_07913113.1| ATP synthase F1 sector epsilon subunit [Staphylococcus lugdunensis
           M23590]
 gi|385783910|ref|YP_005760083.1| ATP synthase subunit epsilon [Staphylococcus lugdunensis N920143]
 gi|418415233|ref|ZP_12988439.1| ATP synthase epsilon chain [Staphylococcus lugdunensis
           ACS-027-V-Sch2]
 gi|418636150|ref|ZP_13198502.1| ATP synthase F1, epsilon subunit [Staphylococcus lugdunensis
           VCU139]
 gi|289179814|gb|ADC87059.1| ATP synthase epsilon chain [Staphylococcus lugdunensis HKU09-01]
 gi|315494685|gb|EFU83025.1| ATP synthase F1 sector epsilon subunit [Staphylococcus lugdunensis
           M23590]
 gi|339894166|emb|CCB53431.1| ATP synthase epsilon chain [Staphylococcus lugdunensis N920143]
 gi|374841149|gb|EHS04628.1| ATP synthase F1, epsilon subunit [Staphylococcus lugdunensis
           VCU139]
 gi|410875240|gb|EKS23165.1| ATP synthase epsilon chain [Staphylococcus lugdunensis
           ACS-027-V-Sch2]
          Length = 133

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 1/88 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L ++ V P  S    ++V++V++  + G+MG++ GH+PT+A LK G + V   N ++   
Sbjct: 4   LNLDIVTPNGSVYKREDVELVVLQTTAGEMGIMSGHIPTVAALKTGHIKVRFHNGSEYLA 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQID 157
           VS GF  +  + ++ +I   A   ++ID
Sbjct: 64  VSGGFVEVRQHKLS-VIVQTAETAEEID 90


>gi|421093236|ref|ZP_15553963.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200801926]
 gi|410364199|gb|EKP15225.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200801926]
 gi|456891218|gb|EMG01960.1| ATP synthase F1, epsilon subunit [Leptospira borgpetersenii str.
           200701203]
          Length = 127

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  GVL +  G   K  
Sbjct: 5   KLNVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGVLEIRKGEKLKNI 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQ 170
            V  GF  +  N+V+ I+       + ID    +K LAE  +
Sbjct: 64  SVEGGFIEVKDNTVS-ILTDHGALKEDIDIEAEKKALAEVEK 104


>gi|398355367|ref|YP_006400831.1| ATP synthase subunit epsilon [Sinorhizobium fredii USDA 257]
 gi|390130693|gb|AFL54074.1| ATP synthase epsilon chain [Sinorhizobium fredii USDA 257]
          Length = 134

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 7/107 (6%)

Query: 73  NFVL--PYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKY 128
           NF L  P    LSA+ V  V++PA+ G+M V+  H PT+  +KPGV++V   DG  T+++
Sbjct: 6   NFELVSPERLLLSAQ-VTEVVIPATEGEMTVMANHAPTMTTIKPGVVTVKTADGK-TERF 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
            V  GFA I       ++A  AV +D++D ++++  + E   +L  A
Sbjct: 64  AVFGGFADILPTGCT-LLAESAVHVDELDRTVLENRIDEARAELEGA 109


>gi|67906679|gb|AAY82767.1| predicted F0F1-type ATP synthase epsilon subunit [uncultured
           bacterium eBACred22E04]
          Length = 141

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSG 133
           ++    EL +++V+MV  PA  G++GV P H P I +LKPG +      D  K ++VS G
Sbjct: 9   IVSAEEELFSEDVEMVYAPAEMGEVGVSPNHTPLITKLKPGDVRAQISKDEMKTFYVSGG 68

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              I  N V  I++  A+  D +D     +   +  + + +++++++ ++A+
Sbjct: 69  ILEIQPNEVT-ILSDTAIREDDLDEERALEAERQAKEAMKNSSSEIDSSKAK 119


>gi|157783457|gb|ABV72536.1| ATP synthase CF1 epsilon subunit [Heterocapsa triquetra]
          Length = 130

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V  V++P+++GQ+GVL  H P I  L  GVL    G + K      GFA + +N ++ I+
Sbjct: 15  VSEVVLPSASGQLGVLANHAPMITALDIGVLRYKQGGEWKPLVTYGGFAQVDSNMLS-IL 73

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSA 193
             +   ++ ID    +K L     KL SA +  EK +A   V   SA
Sbjct: 74  VNDFDTVEDIDGEAAKKDLEAATAKLESAGSKKEKLDATAAVKKASA 120


>gi|323137977|ref|ZP_08073051.1| ATP synthase F1, epsilon subunit [Methylocystis sp. ATCC 49242]
 gi|322396696|gb|EFX99223.1| ATP synthase F1, epsilon subunit [Methylocystis sp. ATCC 49242]
          Length = 133

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 2/98 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKYFVSSGFAFIHAN 140
           L + +V+ V+ P + GQ  VL  H P +  LK GV++V  G+   +K FV  GFA + A 
Sbjct: 15  LFSGDVESVVAPGAEGQFTVLKDHAPVMTTLKSGVVTVAGGDGKVEKLFVRGGFADVSAA 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
               I+A  A+P+ +ID + V   L +  + L+ A T+
Sbjct: 75  GFT-ILAELAIPLSEIDVAKVDADLKDAREDLADAKTE 111


>gi|346993678|ref|ZP_08861750.1| F0F1 ATP synthase subunit epsilon [Ruegeria sp. TW15]
          Length = 136

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 2/102 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + + +  + V P  S L++ E   V +P + G M  +P H PTI  L+PG+L V      
Sbjct: 1   MANTMQFDLVSPERS-LASLEATAVQIPGADGDMTAMPDHAPTITTLRPGILKVEAPAGA 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
            +Y V+ GFA I+ + ++ ++A +A+P+ ++  S +   +AE
Sbjct: 60  SEYLVTGGFAQINGDGLS-VLAEKAIPVAEVTRSHMDDLIAE 100


>gi|269977539|ref|ZP_06184506.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain [Mobiluncus
           mulieris 28-1]
 gi|269934142|gb|EEZ90709.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain [Mobiluncus
           mulieris 28-1]
          Length = 105

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+  A  L   E   V+VPA+ G +G+LPGH P +  L+PG + V     T++  V+SGF
Sbjct: 7   VVDRAHTLFQGEAHQVVVPAANGDLGILPGHQPLLVVLRPGKVRVTSNGKTQELAVTSGF 66

Query: 135 AFIHANSVADIIA 147
           A +  N+V  ++ 
Sbjct: 67  ASVDNNTVTVVLG 79


>gi|254470761|ref|ZP_05084164.1| ATP synthase F1, epsilon subunit [Pseudovibrio sp. JE062]
 gi|374328984|ref|YP_005079168.1| ATP synthase subunit epsilon [Pseudovibrio sp. FO-BEG1]
 gi|211959903|gb|EEA95100.1| ATP synthase F1, epsilon subunit [Pseudovibrio sp. JE062]
 gi|359341772|gb|AEV35146.1| ATP synthase epsilon chain [Pseudovibrio sp. FO-BEG1]
          Length = 135

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 3/118 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHAN 140
           LSAK  D V VP S G+ GV  GH P ++ ++PGV+     + +K  YFV  GFA + A+
Sbjct: 17  LSAKVTD-VTVPGSEGEFGVGAGHSPFLSTMRPGVVKALSEDGSKHDYFVRGGFADVSAS 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
            +  ++A +A+P+  +D   + + + + ++ ++ A  +  +  A++ +     L +AL
Sbjct: 76  GMT-VLAEQAIPMADLDAGYIAQQIQDASEDVADAKDEDARQAARLVLSQLQELQAAL 132


>gi|150398118|ref|YP_001328585.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium medicae WSM419]
 gi|166222498|sp|A6UDM0.1|ATPE_SINMW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|150029633|gb|ABR61750.1| ATP synthase F1, epsilon subunit [Sinorhizobium medicae WSM419]
          Length = 134

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 7/122 (5%)

Query: 71  TVNFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTKKY 128
           T NF L     L   E V  V++PA+ G+M V+  H PT+  ++PGV++V     +T++Y
Sbjct: 4   TFNFELVSPERLLVSETVTEVVIPATEGEMTVMANHAPTMTTVRPGVVAVKTAAGNTERY 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT----TDLEKAEA 184
            V  GFA I       ++A  AV +D++D ++++  +     +L  A+    T LE+  A
Sbjct: 64  AVFGGFADILPTGCT-LLAESAVHVDELDSTVLENRIEAARAELEGASDEKKTRLEQLVA 122

Query: 185 QI 186
           ++
Sbjct: 123 EL 124


>gi|456013746|gb|EMF47383.1| ATP synthase epsilon chain [Planococcus halocryophilus Or1]
          Length = 134

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 10/98 (10%)

Query: 70  LTVNFVLP----YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + VN V P    Y SE+S     MVI   +TG+MG+LPGH+PT+A L  G + +   N T
Sbjct: 4   IAVNIVTPDGPVYDSEVS-----MVIAVTATGEMGILPGHIPTVAPLGIGAVRLKKENST 58

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           +   V+ GF  I    V  I+A  A     ID S  Q+
Sbjct: 59  ELVAVNGGFLEIRPEKVT-ILAQSAERATDIDLSRAQE 95


>gi|402489880|ref|ZP_10836673.1| F0F1 ATP synthase subunit epsilon [Rhizobium sp. CCGE 510]
 gi|401811219|gb|EJT03588.1| F0F1 ATP synthase subunit epsilon [Rhizobium sp. CCGE 510]
          Length = 135

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V  GFA I   
Sbjct: 16  LLSEMVTEVVIPATEGEMTVMAHHAPTMTTVKPGVVSVRSASGKKQDYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
               ++A  AVP++++          E  +++ +A T+LE  E
Sbjct: 76  GCT-LLAESAVPVEELHKD-------ELTRRIEAARTELENTE 110


>gi|374585265|ref|ZP_09658357.1| ATP synthase F1 subcomplex epsilon subunit [Leptonema illini DSM
           21528]
 gi|373874126|gb|EHQ06120.1| ATP synthase F1 subcomplex epsilon subunit [Leptonema illini DSM
           21528]
          Length = 130

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 5/121 (4%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  +L ++ V PY S       D V +P   G  G+ PGH    A L PG L+VH G++ 
Sbjct: 1   MSKQLEISVVTPYRSMFEGV-ADSVQIPLFDGLAGIQPGHATMFARLGPGKLTVHQGSER 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           K  FV  GF  +  N V  ++A  A+  ++I  S  +K   E +  L+  T   E+ E +
Sbjct: 60  KILFVDGGFLEVAGNRVT-VLAHNALAPEEIKASDAEK---ERDALLARKTAGDEEIEER 115

Query: 186 I 186
           +
Sbjct: 116 L 116


>gi|239637395|ref|ZP_04678377.1| ATP synthase F1, epsilon subunit [Staphylococcus warneri L37603]
 gi|417644407|ref|ZP_12294397.1| ATP synthase F1, epsilon subunit [Staphylococcus warneri VCU121]
 gi|445059152|ref|YP_007384556.1| F0F1 ATP synthase subunit epsilon [Staphylococcus warneri SG1]
 gi|239596995|gb|EEQ79510.1| ATP synthase F1, epsilon subunit [Staphylococcus warneri L37603]
 gi|330684776|gb|EGG96469.1| ATP synthase F1, epsilon subunit [Staphylococcus epidermidis
           VCU121]
 gi|443425209|gb|AGC90112.1| F0F1 ATP synthase subunit epsilon [Staphylococcus warneri SG1]
          Length = 134

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 9/103 (8%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
           L++N V P  S     +V++ ++  + G+MGV+ GH+PT++ LK G + V  H+GN+   
Sbjct: 4   LSLNIVTPNGSVYERDDVELAVLQTTAGEMGVMNGHIPTVSALKTGYVKVNFHNGNE--- 60

Query: 128 YF-VSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAE 167
           Y  VS GF  +  + ++ I+  A  A  ID ++ + + K  AE
Sbjct: 61  YIAVSDGFVEVRQHQLSIIVQTAETATEID-VERAKLAKSRAE 102


>gi|378787298|gb|AFC39929.1| ATP synthase CF1 epsilon subunit [Porphyra umbilicalis]
          Length = 134

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E   +I+P+STGQ+G+L GH P +  L  GV+ V    +     +  GFA I  N +  I
Sbjct: 18  EAQEIILPSSTGQLGILTGHAPLLTALDIGVMRVRVDKEWMPIVLLGGFAEIENNQLT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +   A    QID    +K L    Q L+ A++  EK EA
Sbjct: 77  LVNGAEEASQIDLVEAEKNLDTATQLLNDASSSKEKIEA 115


>gi|300693750|ref|YP_003749723.1| ATP synthase epsilon chain (ATP synthase f1 sector epsilon subunit)
           [Ralstonia solanacearum PSI07]
 gi|299075787|emb|CBJ35092.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Ralstonia solanacearum PSI07]
 gi|344170991|emb|CCA83443.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [blood disease bacterium R229]
 gi|344175278|emb|CCA87940.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Ralstonia syzygii R24]
          Length = 139

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 2/98 (2%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHANSVADIIA 147
            V+VP + G++G+LPGH P +  L+PG + V   ND +   FV+ GFA I    V  ++A
Sbjct: 22  FVVVPGTEGELGILPGHEPLLTRLRPGTVRVTLENDDEVILFVAGGFAHILPQEVI-LLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             AV    +D +  Q+      + L ++ + ++ A AQ
Sbjct: 81  DTAVRARDLDEAKAQQARTAAEELLQNSRSKIDYARAQ 118


>gi|218660807|ref|ZP_03516737.1| F0F1 ATP synthase subunit epsilon [Rhizobium etli IE4771]
          Length = 135

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 10/113 (8%)

Query: 73  NFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFV 130
           NF L     L   E V  V++PA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V
Sbjct: 6   NFELVSPERLLLSEMVTEVVIPATEGEMTVMAHHAPTMTTIKPGVVSVRSASGKKQDYVV 65

Query: 131 SSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             GFA I       ++A  AVP++++          E  +++ +A  +LE AE
Sbjct: 66  FGGFADILPTGCT-LLAESAVPVEELHKD-------ELTRRIEAARKELEHAE 110


>gi|283806761|pdb|2RQ7|A Chain A, Solution Structure Of The Epsilon Subunit Chimera
           Combining The N-Terminal Beta-Sandwich Domain From T.
           Elongatus Bp-1 F1 And The C-Terminal Alpha-Helical
           Domain From Spinach Chloroplast F1
          Length = 134

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P++TGQ+G+L  H P +  L+ GV+ V    +     +  GFA +  N V  I+   
Sbjct: 22  VILPSTTGQLGILSNHAPLLTALETGVMRVRQDREWVAIALMGGFAEVENNEVT-ILVNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE-AQIGVDVHSALNSALT 199
           A   D IDP        E  Q L  A  +L KAE A+  ++ + AL  A T
Sbjct: 81  AERGDTIDPQ-------EAQQTLEIAEANLRKAEGARQKIEANLALRRART 124


>gi|77819907|gb|ABB04096.1| ATP synthase CF1 epsilon chain [Tetraselmis suecica]
          Length = 132

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 1/97 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           D +I+P +TGQMGVL  H P I+ L  GV+ +   N+ +   +  GFA I  N V  I+ 
Sbjct: 20  DEIILPTNTGQMGVLANHAPLISALDIGVMLIRTQNNWQSLALMGGFALIQQNQVT-ILV 78

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
            EA     I     +    E   K   A    +K EA
Sbjct: 79  NEAESAKSISKDEAELAFNEAKLKFEKAEGQKQKVEA 115


>gi|416932071|ref|ZP_11933603.1| F0F1 ATP synthase subunit epsilon [Burkholderia sp. TJI49]
 gi|325525632|gb|EGD03406.1| F0F1 ATP synthase subunit epsilon [Burkholderia sp. TJI49]
          Length = 141

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 2/101 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVAD 144
           E   V +P  TG++G+LPGH P I  ++PG + +  +G + +  FV+ G   +   +V  
Sbjct: 19  EAKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGGILEVQPGAVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++A  A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 78  VLADTAIRGKDLDSAKAEEARKRAEETLQNAKSDIDLAKAQ 118


>gi|307701273|ref|ZP_07638294.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
           [Mobiluncus mulieris FB024-16]
 gi|307613434|gb|EFN92682.1| ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
           [Mobiluncus mulieris FB024-16]
          Length = 105

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+  A  L   E   V+VPA+ G +G+LPGH P +  L+PG + V     T++  V+SGF
Sbjct: 7   VVDRAHTLFQGEAHQVVVPAANGDLGILPGHQPLLVVLRPGKVRVTSNGKTQELAVTSGF 66

Query: 135 AFIHANSVADIIA 147
           A +  N+V  ++ 
Sbjct: 67  ASVDNNAVTVVLG 79


>gi|89095632|ref|ZP_01168526.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. NRRL B-14911]
 gi|89089378|gb|EAR68485.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. NRRL B-14911]
          Length = 135

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +VDMV   A +G++G+LPGH+P +A L+ G + + +G +T+   V+ GF  +  + V  I
Sbjct: 19  DVDMVSTKAQSGELGILPGHIPMVAPLQIGAVRLKNGGNTELLAVNGGFIEVRPDQVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +A  A   + ID    +       Q+L+    D
Sbjct: 78  LAQSAEQSEGIDIERAKSAKQRAEQRLADQKRD 110


>gi|422338406|ref|ZP_16419366.1| ATP synthase F1, epsilon subunit [Fusobacterium nucleatum subsp.
           polymorphum F0401]
 gi|355372322|gb|EHG19663.1| ATP synthase F1, epsilon subunit [Fusobacterium nucleatum subsp.
           polymorphum F0401]
          Length = 134

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +   N  K+  YF+S GF  I +N+ A IIA E   
Sbjct: 28  SEGDIGILPNHAPFVAELSMGKMEIESPNKDKRDIYFLSGGFLEI-SNNQATIIADEIFS 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           I++ID    Q  +    ++L    TD E
Sbjct: 87  IEEIDIESEQTLVENLKKELEKLETDEE 114


>gi|456863977|gb|EMF82412.1| ATP synthase F1, epsilon subunit [Leptospira weilii serovar Topaz
           str. LT2116]
          Length = 127

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  G+L +  G   K  
Sbjct: 5   KLNVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVATLGIGILEIRKGEKLKVL 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEAQ 185
            V  GF  +  N ++ I+       D ID    +K LAE  +KLS   S    L+K + +
Sbjct: 64  SVEGGFIEVKENFIS-ILTDHGALKDDIDLEAEKKALAE-AEKLSPSDSKNLLLQKTKTR 121

Query: 186 I 186
           I
Sbjct: 122 I 122


>gi|254798619|ref|YP_003058269.1| ATP synthase CF1 epsilon subunit [Parachlorella kessleri]
 gi|229915567|gb|ACQ90910.1| CF1 epsilon subunit of ATP synthase [Parachlorella kessleri]
          Length = 135

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + + +I+P +TGQMGVL  H P I  L  GV  +   ++     +  GFA I  N V  I
Sbjct: 18  QAEEIILPTNTGQMGVLSNHAPLITALDIGVTLIRSKSEWIPVALMGGFALIKQNQVT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           +  EA  +  I+P   +    +  +KL  A  + ++ EA +
Sbjct: 77  LVNEAESVKTIEPEQAELAFQQAKEKLEQAQGEKQRVEATV 117


>gi|226947192|ref|YP_002802265.1| F0F1 ATP synthase subunit epsilon [Azotobacter vinelandii DJ]
 gi|226722119|gb|ACO81290.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Azotobacter vinelandii DJ]
          Length = 140

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 17/104 (16%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MVI  A+ G +G+LPGH+P + +LKPG V  +  G D + +++S GF  + 
Sbjct: 12  EELFSGLVEMVIAHANMGDVGILPGHMPLLTDLKPGPVRVIKQGGDEEIFYISGGFLEVQ 71

Query: 139 -------------ANSVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
                        A  + ++ A EAV   Q   +L +KG AEF+
Sbjct: 72  PSMVKVLADTATRAKDLDEVAAQEAVKAAQ--KALSEKG-AEFD 112


>gi|340776385|ref|ZP_08696328.1| ATP synthase F1 subunit epsilon [Acetobacter aceti NBRC 14818]
          Length = 135

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHAN 140
           L +++VDMV++P   G +  +P H P +  L+ G +++++G   T  YFV  GFA +   
Sbjct: 14  LVSRDVDMVVMPGEEGDIAAMPEHAPMMLLLRGGTVTLYEGETPTDHYFVGGGFADM-TQ 72

Query: 141 SVADIIAVEAVPIDQI 156
           +   I+A EAVP+ +I
Sbjct: 73  TRCTILADEAVPVTEI 88


>gi|410584286|ref|ZP_11321391.1| ATP synthase, F1 epsilon subunit [Thermaerobacter subterraneus DSM
           13965]
 gi|410505148|gb|EKP94658.1| ATP synthase, F1 epsilon subunit [Thermaerobacter subterraneus DSM
           13965]
          Length = 140

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +EVD +IVP + G +GVLPGH P +A LK G+L+     + ++  V+ GF F  A++ A 
Sbjct: 20  EEVDSLIVPGAEGLLGVLPGHAPMVAALKIGILTYRKDGERRRVAVAGGF-FEVADNHAV 78

Query: 145 IIAVEAVPIDQID 157
           +++  A   ++ID
Sbjct: 79  VLSDAAERAEEID 91


>gi|224178029|ref|YP_002600928.1| CF1 epsilon subunit of ATP synthase [Pyramimonas parkeae]
 gi|215882696|gb|ACJ71069.1| CF1 epsilon subunit of ATP synthase [Pyramimonas parkeae]
          Length = 133

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 1/102 (0%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +E   +I+P +TGQMGVL  H P I  L  GV+ V  G +     +  GFA +  N V  
Sbjct: 17  EEATELILPTNTGQMGVLKNHTPLITGLDVGVMLVRTGTEWISMALMGGFALVKDNKVT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           I+  EAV    I+P   +       + L  A    EK EA I
Sbjct: 76  ILVNEAVLGSSINPEEAEIEYQSAKEILEKANGRKEKIEANI 117


>gi|227874660|ref|ZP_03992823.1| possible ATP synthase, epsilon chain [Mobiluncus mulieris ATCC
           35243]
 gi|227844869|gb|EEJ55015.1| possible ATP synthase, epsilon chain [Mobiluncus mulieris ATCC
           35243]
          Length = 105

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+  A  L   E   V+VPA+ G +G+LPGH P +  L+PG + V     T++  V+SGF
Sbjct: 7   VVDRAHTLFQGEAHQVVVPAANGDLGILPGHQPLLVVLRPGKVRVTSNGKTQELAVTSGF 66

Query: 135 AFIHANSVADIIA 147
           A +  N+V  ++ 
Sbjct: 67  ASVDNNAVTVVLG 79


>gi|325291353|ref|YP_004267534.1| ATP synthase F1 subcomplex subunit epsilon [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966754|gb|ADY57533.1| ATP synthase F1 subcomplex epsilon subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 136

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +    T+N V P  +  +  EV+ ++VP   G++G+LP H P +A L  GV+ +      
Sbjct: 1   MAGSFTLNVVSPNGAIFN-DEVEFLVVPGEDGELGILPNHSPLMATLNIGVIRITQNGKV 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            +  +S GF  +  N V  ++A  A   D ID    +       Q+L+S + +++   A+
Sbjct: 60  NRMALSGGFMEVGGNKVT-LLAESAELADTIDIVRAKAAKERAEQRLASKSAEIDMVRAE 118

Query: 186 IGV 188
           + +
Sbjct: 119 LAL 121


>gi|228994023|ref|ZP_04153924.1| ATP synthase F1, epsilon subunit [Bacillus pseudomycoides DSM
           12442]
 gi|228765671|gb|EEM14324.1| ATP synthase F1, epsilon subunit [Bacillus pseudomycoides DSM
           12442]
          Length = 133

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+MV V A +G+MG+L GH+PT+A LK   + + +G  T    VS GF  +  + V  
Sbjct: 18  KEVEMVSVKAESGEMGILSGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
           ++A  A   + ID     +      Q++       D ++AE
Sbjct: 77  VLAPSAEEANHIDIHRANEAKRRAEQRMQDKQVHVDFKRAE 117


>gi|159900586|ref|YP_001546833.1| ATP synthase F0F1 subunit epsilon [Herpetosiphon aurantiacus DSM
           785]
 gi|254809369|sp|A9AVV5.1|ATPE_HERA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|159893625|gb|ABX06705.1| ATP synthase F1, epsilon subunit [Herpetosiphon aurantiacus DSM
           785]
          Length = 136

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 3/102 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           ++EVDMV  P+  G++G+LP H P +  L+PG L       +  Y +S GF  +  N V 
Sbjct: 16  SEEVDMVSAPSVEGRVGILPRHEPLLTVLQPGELHYVKNGVSMPYAISGGFMEVLPNRVT 75

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
            I+A  A   D+ID +  ++   +  Q +    +T DL +AE
Sbjct: 76  -ILADTAERADEIDETRAEQARLQAEQAMRDRQSTEDLARAE 116


>gi|402848376|ref|ZP_10896639.1| ATP synthase epsilon chain [Rhodovulum sp. PH10]
 gi|402501381|gb|EJW13030.1| ATP synthase epsilon chain [Rhodovulum sp. PH10]
          Length = 133

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           EV  V VP   G  GV  GH P +  L+PGVL+V+ G        V  GFA I  N +  
Sbjct: 19  EVTQVDVPGEEGDFGVFAGHAPFVTTLRPGVLTVYGGEHAPTLAVVRGGFAEIGPNGLT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           ++A E V +D+I    +++ + +  + ++ A
Sbjct: 78  VLAQEVVSVDEIQAETIEQAMQDVREDIADA 108


>gi|298245832|ref|ZP_06969638.1| ATP synthase F1, epsilon subunit [Ktedonobacter racemifer DSM
           44963]
 gi|297553313|gb|EFH87178.1| ATP synthase F1, epsilon subunit [Ktedonobacter racemifer DSM
           44963]
          Length = 154

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 7/125 (5%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+    EL   E  +V  P   G++G+LP H   +  LKPG L +  G+  + +FVS GF
Sbjct: 14  VVTAERELYNGEATLVSAPGVEGRLGILPHHAALLTFLKPGELRIELGDAEEPFFVSGGF 73

Query: 135 AFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
             +  + V  I+A  A   + ID +  Q+      ++L  + +  ++AEAQ      +AL
Sbjct: 74  LEVSHDRVT-ILADAAEEGETIDEARAQEARRLAEERLVESRSQNDRAEAQ------AAL 126

Query: 195 NSALT 199
             AL+
Sbjct: 127 ERALS 131


>gi|389816659|ref|ZP_10207611.1| F0F1 ATP synthase subunit epsilon [Planococcus antarcticus DSM
           14505]
 gi|388465032|gb|EIM07354.1| F0F1 ATP synthase subunit epsilon [Planococcus antarcticus DSM
           14505]
          Length = 134

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 70  LTVNFVLP----YASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +TVN V P    Y SE+S     MVI   +TG++GVLPGH+PT+A L  G + +   N T
Sbjct: 4   ITVNIVTPDGPVYDSEVS-----MVIAVTATGEIGVLPGHIPTVAPLGIGAVRLKKENST 58

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQK 163
           +   V+ GF  I    V  I+A  A     ID +  Q+
Sbjct: 59  ELVAVNGGFLEIRPEKVT-ILAQSAESATDIDLARAQE 95


>gi|254485856|ref|ZP_05099061.1| ATP synthase F1, epsilon subunit [Roseobacter sp. GAI101]
 gi|214042725|gb|EEB83363.1| ATP synthase F1, epsilon subunit [Roseobacter sp. GAI101]
          Length = 145

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ +V  V +P + G M  +P H PT+  L+PGVL V       +Y V+ GFA I A  
Sbjct: 16  LASMQVTAVQIPGADGDMTAMPDHAPTLTTLRPGVLRVEGPEGATEYVVTGGFAEISAAG 75

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           V+ ++A  AVP  ++    + + + E     S+A ++ 
Sbjct: 76  VS-VLAERAVPKGEMTQEHLDEMMEEAKTMYSTAKSNF 112


>gi|52082212|ref|YP_081003.1| ATP synthase F0F1 subunit epsilon [Bacillus licheniformis DSM 13 =
           ATCC 14580]
 gi|319648085|ref|ZP_08002302.1| ATP synthase subunit epsilon [Bacillus sp. BT1B_CT2]
 gi|404491096|ref|YP_006715202.1| F0F1 ATP synthase subunit epsilon [Bacillus licheniformis DSM 13 =
           ATCC 14580]
 gi|423684222|ref|ZP_17659061.1| ATP synthetase F0F1 subunit epsilon [Bacillus licheniformis WX-02]
 gi|81690848|sp|Q65DX5.1|ATPE_BACLD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|52005423|gb|AAU25365.1| ATP synthase (subunit epsilon) [Bacillus licheniformis DSM 13 =
           ATCC 14580]
 gi|52350105|gb|AAU42739.1| ATP synthase epsilon subunit [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|317389720|gb|EFV70530.1| ATP synthase subunit epsilon [Bacillus sp. BT1B_CT2]
 gi|383440996|gb|EID48771.1| ATP synthetase F0F1 subunit epsilon [Bacillus licheniformis WX-02]
          Length = 131

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 2/119 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L VN V P      A +++MV V A +G++G+LPGH+PT+A LK   + +     T+   
Sbjct: 4   LKVNIVTPDGPVYDA-DIEMVSVRAESGELGILPGHIPTVAPLKIAAVRLKKDGQTELVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           VS G   +  + V  I+A  A   +QID            ++L   T D++   A++ +
Sbjct: 63  VSGGIVEVRPDHVT-ILAQTAETSEQIDKERALAAKRRAEERLQKQTPDVDIIRAELAL 120


>gi|418939199|ref|ZP_13492603.1| ATP synthase epsilon chain [Rhizobium sp. PDO1-076]
 gi|375054111|gb|EHS50502.1| ATP synthase epsilon chain [Rhizobium sp. PDO1-076]
          Length = 135

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M V+  H PT+  +KPGV+SV        KY V  GFA +   
Sbjct: 16  LLSEMVSEVVIPATEGEMTVMANHAPTMTTIKPGVVSVKLASGQVTKYVVFGGFADVLPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
               ++A  AVP+ ++ P  + K + E  ++L S
Sbjct: 76  GCT-LLAESAVPLSEVTPDTLSKRIDEARKELDS 108


>gi|320160784|ref|YP_004174008.1| ATP synthase subunit epsilon [Anaerolinea thermophila UNI-1]
 gi|319994637|dbj|BAJ63408.1| ATP synthase epsilon chain [Anaerolinea thermophila UNI-1]
          Length = 138

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           A++VDMVI+P   GQMGVLP H P +  L+ G++ V    +   + V+ GFA +  + V 
Sbjct: 16  AEDVDMVILPGGGGQMGVLPNHSPVLTTLQYGIIHVKKQGEEYYFTVAGGFAEVQPDQVT 75

Query: 144 DIIAVEAVPIDQID 157
            ++A  A  +++I+
Sbjct: 76  -VLADAAENVEEIN 88


>gi|359394595|ref|ZP_09187648.1| ATP synthase epsilon chain [Halomonas boliviensis LC1]
 gi|357971842|gb|EHJ94287.1| ATP synthase epsilon chain [Halomonas boliviensis LC1]
          Length = 142

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 7/111 (6%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGND 124
           + +  T N V   AS  S   V+ VI     G +G+LPGH P + EL+PG V  +HD   
Sbjct: 1   MANSFTCNIVSAEASIFSGT-VEQVIASGMMGDLGILPGHAPLLTELQPGPVRVIHDDGK 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ----KGLAEFNQK 171
              +FVS GF  +  + V  I+A  A     ++ +  +    + L  FN+K
Sbjct: 60  EDNFFVSGGFMEVQPD-VVTILADSASRASDLNEAAAEEARLQALKAFNEK 109


>gi|359726200|ref|ZP_09264896.1| F0F1 ATP synthase subunit epsilon [Leptospira weilii str.
           2006001855]
          Length = 127

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   EVD ++VP + G  G+LP H P +A L  GVL +  G   K  
Sbjct: 5   KLNVSVISPEKI-LYKGEVDSLVVPGNEGFFGILPNHAPLVAVLGIGVLEIRKGEKLKVL 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEAQ 185
            V  GF  +  NSV+ I+       D I+    +K LAE  +KLS   S    L+K + +
Sbjct: 64  SVEGGFIEVKENSVS-ILTDHGALKDDINLEAEKKALAE-AEKLSPSDSKNLLLQKTKTR 121

Query: 186 I 186
           I
Sbjct: 122 I 122


>gi|84515111|ref|ZP_01002474.1| ATP synthase F1, epsilon subunit [Loktanella vestfoldensis SKA53]
 gi|84511270|gb|EAQ07724.1| ATP synthase F1, epsilon subunit [Loktanella vestfoldensis SKA53]
          Length = 141

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVL-SVHDGNDTKKYFVSSGFAFIHANSVADIIAV 148
           V +PA+ G M  +  H+PTI  L+PGVL  VHDG    +Y VS GFA I A SV+ ++A 
Sbjct: 23  VRIPATEGDMTAMANHLPTITTLRPGVLVVVHDGG-ADEYVVSGGFAEISAESVS-VLAE 80

Query: 149 EAVPIDQI 156
           +A+P  ++
Sbjct: 81  QALPKGEV 88


>gi|153008440|ref|YP_001369655.1| F0F1 ATP synthase subunit epsilon [Ochrobactrum anthropi ATCC
           49188]
 gi|404320579|ref|ZP_10968512.1| F0F1 ATP synthase subunit epsilon [Ochrobactrum anthropi CTS-325]
 gi|166222480|sp|A6WXX2.1|ATPE_OCHA4 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|151560328|gb|ABS13826.1| ATP synthase F1, epsilon subunit [Ochrobactrum anthropi ATCC 49188]
          Length = 135

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  +  Y V  GFA I  
Sbjct: 16  LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-SDSYVVFGGFADITP 74

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q+ +    + L  A+++  + +A+I
Sbjct: 75  QGCT-VLAESATHVDDIDPADIQRRIEHARKALDDASSNEHRTKAEI 120


>gi|256845697|ref|ZP_05551155.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 3_1_36A2]
 gi|256719256|gb|EEU32811.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 3_1_36A2]
          Length = 134

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSS 132
           V+    ++  +E   + +  S G +G+LP H P +AEL  G + +   N  ++  YF+S 
Sbjct: 8   VVTQVKKILEQEAGYLRLRTSEGDIGILPNHAPFVAELSMGKMEIESPNKDRRDVYFLSG 67

Query: 133 GFAFIHANSVADIIAVEAVPIDQID 157
           GF  I +N+ A IIA E +PI++ID
Sbjct: 68  GFLEI-SNNQATIIADEILPIEEID 91


>gi|304392605|ref|ZP_07374545.1| ATP synthase F1, epsilon subunit [Ahrensia sp. R2A130]
 gi|303295235|gb|EFL89595.1| ATP synthase F1, epsilon subunit [Ahrensia sp. R2A130]
          Length = 133

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 9/124 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
            T   V P    LS    ++V VPA  G MGVL  H P +  L+PG++SV   DG++T +
Sbjct: 5   FTFELVSPEKLMLSGA-AEIVTVPAVEGDMGVLSNHAPVMTSLRPGLVSVKMADGDET-E 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLV--QKGLAEFNQKLSSATTDLEKAEAQ 185
           YFV  GFA I  ++V  ++A  A+P  ++   ++  Q+  AE  + +++   +  KA+ Q
Sbjct: 63  YFVKGGFADITPDAVT-VLAEFAIPRGELTSEMMAGQRKAAE--EAMNAEKDENRKADHQ 119

Query: 186 IGVD 189
             +D
Sbjct: 120 SYLD 123


>gi|206558441|ref|YP_002229201.1| F0F1 ATP synthase subunit epsilon [Burkholderia cenocepacia J2315]
 gi|444357085|ref|ZP_21158667.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia BC7]
 gi|444365684|ref|ZP_21165806.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia
           K56-2Valvano]
 gi|226740229|sp|B4EEZ0.1|ATPE_BURCJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|198034478|emb|CAR50343.1| ATP synthase epsilon chain [Burkholderia cenocepacia J2315]
 gi|443605796|gb|ELT73620.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443606643|gb|ELT74408.1| ATP synthase F1, epsilon subunit [Burkholderia cenocepacia BC7]
          Length = 141

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSG 133
           V+    ++ + E   V +P  TG++G+LPGH P I  ++PG + +  +G + +  FV+ G
Sbjct: 8   VVSAEEQIFSGEAKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  ++      + L +  +DL+ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGKDLDAAKAEEARKRAEETLQNVKSDLDLAKAQ 118


>gi|393769065|ref|ZP_10357593.1| F0F1 ATP synthase subunit epsilon [Methylobacterium sp. GXF4]
 gi|392725306|gb|EIZ82643.1| F0F1 ATP synthase subunit epsilon [Methylobacterium sp. GXF4]
          Length = 133

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 73  NFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVS 131
           +FV P  + L + EV  V +P + G+M V+PGH P +  L+ GV+ + +   + K+ +V 
Sbjct: 7   DFVGPERT-LYSGEVTAVQLPGTEGEMTVMPGHAPVLTSLRVGVIVITESQGSGKRIYVR 65

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            GFA I   +V  ++A  A PI+++    + + + E  +    AT DL+K E
Sbjct: 66  GGFADIGPTAVT-VLAERAAPIEELTHESLDRDI-EAAELQRDATEDLQKRE 115


>gi|424886677|ref|ZP_18310285.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM2012]
 gi|424897320|ref|ZP_18320894.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM2297]
 gi|393176028|gb|EJC76070.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM2012]
 gi|393181547|gb|EJC81586.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM2297]
          Length = 135

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 9/103 (8%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V  GFA I   
Sbjct: 16  LLSEMVTEVVIPATEGEMTVMAHHAPTMTTVKPGVVSVRSASGKKQDYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
               ++A  AVP++++          E  +++ +A  +LE AE
Sbjct: 76  GCT-LLAESAVPVEELHKD-------ELTRRIEAARLELEHAE 110


>gi|420243932|ref|ZP_14747790.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. CF080]
 gi|398057129|gb|EJL49104.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. CF080]
          Length = 135

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L +++V  V++PA+ G+M VL  H PT+  +KPGV+SV        KY V  GFA I   
Sbjct: 16  LVSEKVTEVVIPATLGEMTVLANHAPTMTTIKPGVVSVKLASGQVNKYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
               ++A  AVP  ++  + +QK +     +++ A +D  K + +
Sbjct: 76  G-CTLLAESAVPASELTHATLQKRIETTQGEINHAQSDEHKTKLE 119


>gi|170747036|ref|YP_001753296.1| F0F1 ATP synthase subunit epsilon [Methylobacterium radiotolerans
           JCM 2831]
 gi|170653558|gb|ACB22613.1| ATP synthase F1, epsilon subunit [Methylobacterium radiotolerans
           JCM 2831]
          Length = 133

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 73  NFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVS 131
           +FV P  + L + EV  V +P + G+M V+PGH P +  L+ GV+ + +   + K+ +V 
Sbjct: 7   DFVGPERT-LYSGEVTAVQLPGTEGEMTVMPGHAPVLTSLRVGVIVITESQGSGKRIYVR 65

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            GFA I   +V  ++A  A PI+++    + + + E  +    AT DL+K E
Sbjct: 66  GGFADIGPTAVT-VLAERAAPIEELTHESLDRDI-EAVEMQRDATEDLQKRE 115


>gi|56751795|ref|YP_172496.1| F0F1 ATP synthase subunit epsilon [Synechococcus elongatus PCC
           6301]
 gi|81301125|ref|YP_401333.1| ATP synthase F0F1 subunit epsilon [Synechococcus elongatus PCC
           7942]
 gi|61219614|sp|P0A2Z8.1|ATPE_SYNE7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|61219616|sp|P0A2Z9.1|ATPE_SYNP6 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|48025|emb|CAA29363.1| unnamed protein product [Synechococcus elongatus PCC 6301]
 gi|436955|gb|AAB82021.1| epsilon subunit of ATP synthase [Synechococcus elongatus PCC 7942]
 gi|56686754|dbj|BAD79976.1| ATP synthase epsilon subunit [Synechococcus elongatus PCC 6301]
 gi|81170006|gb|ABB58346.1| ATP synthase F1, epsilon subunit [Synechococcus elongatus PCC 7942]
          Length = 137

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P++TGQ+G+LPGH P ++ L  GVL V    +     V  GFA +  N V  ++   
Sbjct: 22  VILPSTTGQLGILPGHAPLLSALDTGVLRVRADKEWLAIAVLGGFAEVENNEVT-VLVNA 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           A   D+ID    +   ++ +++L     D  + + Q
Sbjct: 81  AERGDKIDLEEARAAFSQADERLKGVKEDDRQGKFQ 116


>gi|398338717|ref|ZP_10523420.1| F0F1 ATP synthase subunit epsilon [Leptospira kirschneri serovar
           Bim str. 1051]
 gi|418676114|ref|ZP_13237400.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686386|ref|ZP_13247555.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418695305|ref|ZP_13256325.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str. H1]
 gi|418741373|ref|ZP_13297748.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri serovar
           Valbuzzi str. 200702274]
 gi|421091768|ref|ZP_15552533.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str.
           200802841]
 gi|421107141|ref|ZP_15567698.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str. H2]
 gi|421131265|ref|ZP_15591448.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str.
           2008720114]
 gi|400323879|gb|EJO71727.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|409956759|gb|EKO15680.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str. H1]
 gi|409999513|gb|EKO50204.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str.
           200802841]
 gi|410007761|gb|EKO61445.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str. H2]
 gi|410357348|gb|EKP04608.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri str.
           2008720114]
 gi|410739340|gb|EKQ84069.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751409|gb|EKR08387.1| ATP synthase F1, epsilon subunit [Leptospira kirschneri serovar
           Valbuzzi str. 200702274]
          Length = 127

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD +IVP S G  G+LP H P +A L  G+L +  G   K 
Sbjct: 4   NKLKVSVISPEKI-LYKGEVDSLIVPGSEGFFGILPDHAPLVATLGIGILEIRKGEKLKV 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
             +  GF  +  NS++ I+       + ID  + +K L E
Sbjct: 63  LSIERGFIEVKDNSIS-ILTDHGALKEDIDLEVEKKNLVE 101


>gi|334121510|ref|ZP_08495577.1| ATP synthase epsilon chain [Microcoleus vaginatus FGP-2]
 gi|333454950|gb|EGK83620.1| ATP synthase epsilon chain [Microcoleus vaginatus FGP-2]
          Length = 135

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  V P  +   +   + VI+P++TGQ+G+L GH P +  L  GV+ V  G +     
Sbjct: 3   LTVRVVAPDKTVWDSN-AEEVILPSTTGQLGILSGHAPMLTALDTGVMRVRPGKEWVSIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
           +  GFA I  N V  I+   A   + ID    +    E   +L  AT+
Sbjct: 62  LMGGFAEIQENKVT-ILVNGAEKGETIDKEAARTAYTEAEARLEKATS 108


>gi|148260679|ref|YP_001234806.1| ATP synthase F1 subunit epsilon [Acidiphilium cryptum JF-5]
 gi|326403873|ref|YP_004283955.1| ATP synthase subunit epsilon [Acidiphilium multivorum AIU301]
 gi|146402360|gb|ABQ30887.1| ATP synthase F1 subcomplex epsilon subunit [Acidiphilium cryptum
           JF-5]
 gi|325050735|dbj|BAJ81073.1| ATP synthase subunit epsilon [Acidiphilium multivorum AIU301]
          Length = 137

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L A+ V MV++P + G +GVLPGH   I  L+ G++ ++ D     ++FVS GFA I   
Sbjct: 14  LLARPVSMVVIPGTEGDLGVLPGHSKMITSLRGGLIDLYEDEKLVDRFFVSGGFAQITEE 73

Query: 141 SVADIIAVEAVPIDQIDP 158
               ++A     + +IDP
Sbjct: 74  RCT-VLADAITKLGEIDP 90


>gi|160881853|ref|YP_001560821.1| ATP synthase F1 subunit epsilon [Clostridium phytofermentans ISDg]
 gi|160430519|gb|ABX44082.1| ATP synthase F1, epsilon subunit [Clostridium phytofermentans ISDg]
          Length = 139

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E DM+ V  + G+MG+L  H+P  A L PG+L + +G++ +   +  GF  I  + V  I
Sbjct: 23  ETDMIEVKTTEGEMGILKHHIPLTAILTPGILRIKNGSEERIAALHDGFIEILGDRVT-I 81

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A      D+ID +  ++      ++L  A  ++ +A A++ +
Sbjct: 82  LAESCEWPDEIDLNRAKEAKLRAERRLKGAEGNINEARAEMAL 124


>gi|34763441|ref|ZP_00144388.1| ATP synthase epsilon chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742369|ref|ZP_04572850.1| H+-transporting two-sector ATPase [Fusobacterium sp. 4_1_13]
 gi|294785056|ref|ZP_06750344.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 3_1_27]
 gi|421144380|ref|ZP_15604294.1| ATP synthase subunit epsilon [Fusobacterium nucleatum subsp.
           fusiforme ATCC 51190]
 gi|27886882|gb|EAA24007.1| ATP synthase epsilon chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229430017|gb|EEO40229.1| H+-transporting two-sector ATPase [Fusobacterium sp. 4_1_13]
 gi|294486770|gb|EFG34132.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 3_1_27]
 gi|395489174|gb|EJG10015.1| ATP synthase subunit epsilon [Fusobacterium nucleatum subsp.
           fusiforme ATCC 51190]
          Length = 134

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSS 132
           V+    ++  +E   + +  S G +G+LP H P +AEL  G + +   N  ++  YF+S 
Sbjct: 8   VVTQVKKILEQEAGYLRLRTSEGDIGILPNHAPFVAELSMGKMEIESPNKDRRNIYFLSG 67

Query: 133 GFAFIHANSVADIIAVEAVPIDQID 157
           GF  I  N V  IIA E +PI++ID
Sbjct: 68  GFLEISNNQVT-IIADEILPIEEID 91


>gi|231604|sp|P29709.2|ATPE_PROMO RecName: Full=ATP synthase epsilon chain, sodium ion specific;
           AltName: Full=F-ATPase epsilon subunit, sodium ion
           specific; AltName: Full=Na(+)-translocating ATPase
           subunit epsilon
 gi|45656|emb|CAA41375.1| F1 subunit [Propionigenium modestum]
          Length = 137

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           ++ +MVI+    G MGV+  H P +AEL  G + +   N  + YFVS GF  I       
Sbjct: 18  RDAEMVIMRTIEGDMGVMADHAPFVAELAVGEMKIKSANGEEAYFVSGGFLEISKEKTM- 76

Query: 145 IIAVEAVPIDQID 157
           I+A EA+ + +ID
Sbjct: 77  ILADEAIDVKEID 89


>gi|146337565|ref|YP_001202613.1| ATP synthase F0F1 subunit epsilon [Bradyrhizobium sp. ORS 278]
 gi|365887316|ref|ZP_09426169.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3809]
 gi|166222435|sp|A4YKE1.1|ATPE_BRASO RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|146190371|emb|CAL74367.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 278]
 gi|365337095|emb|CCD98700.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3809]
          Length = 135

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V VP   G  GVL GH P +A L+PG+L+V  G   +K  V  G A I    +  I
Sbjct: 19  EVDQVDVPGQEGDFGVLAGHAPFVATLRPGILTVTTGGTQQKIIVLGGLAEISEKGLT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD-LEKA 182
           +A  A  + ++D +     ++    KL+    D L++A
Sbjct: 78  LADVATSLKELDQTAFATEISGMEAKLNEKQGDELDRA 115


>gi|428776560|ref|YP_007168347.1| ATP synthase F1 subcomplex subunit epsilon [Halothece sp. PCC 7418]
 gi|332146794|dbj|BAK19949.1| ApH+ATPase epsilon subunit [Aphanothece halophytica]
 gi|428690839|gb|AFZ44133.1| ATP synthase F1 subcomplex epsilon subunit [Halothece sp. PCC 7418]
          Length = 138

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 18/131 (13%)

Query: 70  LTVNFVLPYAS--ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           LTV  + P  +  + SA+EV   I+P++TGQ+G+L GH P ++ L  GV+ V    D   
Sbjct: 3   LTVRVITPDNTVWDSSAEEV---ILPSTTGQLGILSGHAPLLSALDIGVMRVRPQKDWLS 59

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPS------------LVQKGLAEFNQKLSSA 175
             V+ GFA +  + V  I+   A   + IDP             L Q   A+  Q++  A
Sbjct: 60  ISVAGGFAEVEEDEVT-ILVNSAERGENIDPEKAREIYESAKTRLEQAQEADQRQEIIQA 118

Query: 176 TTDLEKAEAQI 186
           T  L+KA +++
Sbjct: 119 TQALKKARSRL 129


>gi|289577865|ref|YP_003476492.1| ATP synthase F1 subunit epsilon [Thermoanaerobacter italicus Ab9]
 gi|289527578|gb|ADD01930.1| ATP synthase F1, epsilon subunit [Thermoanaerobacter italicus Ab9]
          Length = 137

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+ +IV  +TGQ+G+L GH+P  A +  G L + +    ++ F+S GF  +  +SV  +
Sbjct: 20  DVEEIIVTITTGQIGILKGHIPMTAAIGTGTLQIREDGQWREAFISGGFMEVKRDSVTIL 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
            +    P ++ID +  Q       +KL    +  E   A+      +AL  ALT
Sbjct: 80  SSAVEWP-EEIDIARAQAAKERAEEKLRQRRSKHEHLLAE------AALKRALT 126


>gi|303325906|ref|ZP_07356349.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 3_1_syn3]
 gi|302863822|gb|EFL86753.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 3_1_syn3]
          Length = 135

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  V P  + +SA EV+M + P   G+ GVLP HV  ++ LK G L        +  F
Sbjct: 6   LQLEVVTPDKTVVSA-EVEMAVCPGVEGEFGVLPQHVSMLSALKIGDLRYRVNGKDENVF 64

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA ++ N+V  ++A  A     ID +  Q       ++LS+    L++  A+    
Sbjct: 65  ISGGFADVN-NNVLSVLAESAELATDIDTARAQAAKERAEKRLSAHDDSLDETRAE---- 119

Query: 190 VHSALNSALT 199
             +AL  A+T
Sbjct: 120 --AALQRAVT 127


>gi|312794896|ref|YP_004027818.1| ATP synthase subunit epsilon [Burkholderia rhizoxinica HKI 454]
 gi|312166671|emb|CBW73674.1| ATP synthase epsilon chain (EC 3.6.3.14) [Burkholderia rhizoxinica
           HKI 454]
          Length = 164

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 2/98 (2%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVADIIA 147
            V +P   G++G+LPGH P I  ++PG + + D N  +++ FV+ G   +   +V  ++A
Sbjct: 45  FVALPGEAGELGILPGHTPLITRIRPGSVRIEDENGDEQFVFVAGGILEVQPGAVT-VLA 103

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+   ++D +  ++      + L +  ++LE A AQ
Sbjct: 104 DTAIRGAELDEAKAEQARKRAEEALQNTDSNLEYATAQ 141


>gi|428200758|ref|YP_007079347.1| ATP synthase F1 subunit epsilon [Pleurocapsa sp. PCC 7327]
 gi|427978190|gb|AFY75790.1| ATP synthase, F1 epsilon subunit [Pleurocapsa sp. PCC 7327]
          Length = 138

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 10/94 (10%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           +I+P++TGQ+G+L GH P +  L  GV+ V  G D +   +  GFA +  N V   + V 
Sbjct: 22  IILPSTTGQLGILTGHAPLLTALDIGVMRVRPGKDWRAIALMGGFAEVENNEVK--VLVN 79

Query: 150 AVPI-DQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
           A  + D+ID    +   AE+ Q    A  +LE+A
Sbjct: 80  AAELGDKIDREAAR---AEYTQ----AQANLEEA 106


>gi|410447000|ref|ZP_11301102.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86E]
 gi|409979987|gb|EKO36739.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86E]
          Length = 137

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           ++  + E+ + E  MV    S G++G+ PGH P +  L PG + V +G+D K +F S GF
Sbjct: 8   IVSSSEEIYSGEGTMVFATGSLGEIGIAPGHTPLLTGLAPGPVRVQNGDDEKTFFCSGGF 67

Query: 135 AFIHANSV 142
             I  + V
Sbjct: 68  IEIQPDLV 75


>gi|339504238|ref|YP_004691658.1| ATP synthase subunit epsilon [Roseobacter litoralis Och 149]
 gi|338758231|gb|AEI94695.1| ATP synthase epsilon chain [Roseobacter litoralis Och 149]
          Length = 138

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ +V  V +P + G M  +P H PTI  L+PG+L     + T +Y V+ GFA I A+S
Sbjct: 16  LASVQVTAVQIPGADGDMTAMPDHAPTITTLRPGLLVTEGPDGTSEYVVTGGFAEITASS 75

Query: 142 VADIIAVEAVP 152
           ++ ++A  A+P
Sbjct: 76  IS-VLAERAIP 85


>gi|205375346|ref|ZP_03228136.1| F0F1 ATP synthase subunit epsilon [Bacillus coahuilensis m4-4]
          Length = 134

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L VN V P      A +V+MV   A +G++G+LPGH+P +A L+ G + + +G   +   
Sbjct: 4   LQVNIVTPDGPVYDA-QVEMVSTKAQSGELGILPGHIPMVAPLQIGAVRLKNGAKQELVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           V+ GF  +  + V  I+A  A   + ID +   + L    ++L +   +++ + A++ +
Sbjct: 63  VTGGFIEVRPDQVT-ILAQAAETAESIDVARANEALRRAQERLQAKQDNVDFSRAELAL 120


>gi|168699171|ref|ZP_02731448.1| probable ATP synthase CF1 subunit e [Gemmata obscuriglobus UQM
           2246]
          Length = 139

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           DMVI+P   G++GV PG  P I  L  G L +  G+ TK++FV +GF  +  N V
Sbjct: 26  DMVILPMIDGELGVQPGRSPLIGRLGAGELRLVTGSTTKRFFVEAGFVQVRLNVV 80


>gi|149071997|ref|YP_001293560.1| ATP synthase subunit E [Rhodomonas salina]
 gi|134302948|gb|ABO70752.1| ATP synthase subunit E [Rhodomonas salina]
          Length = 131

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +N + P  +   A   + VI+P+STGQ+G+L GH P +  L  GV+ V    D     
Sbjct: 3   LHINIIAPDRTVWDAN-AEEVILPSSTGQLGILRGHAPLLTALDIGVMRVRIEKDWTPIV 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +  GFA +  N    I+   A    +I+    +K L E   + + AT+  E+ +A
Sbjct: 62  LMGGFAEVE-NDELTILVNGAEEGSKINKDEAEKELEEMTMRFNEATSSKERIQA 115


>gi|345892762|ref|ZP_08843576.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 6_1_46AFAA]
 gi|345046889|gb|EGW50764.1| ATP synthase F1, epsilon subunit [Desulfovibrio sp. 6_1_46AFAA]
          Length = 133

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  V P  + +SA EV+M + P   G+ GVLP HV  ++ LK G L        +  F
Sbjct: 4   LQLEVVTPDKTVVSA-EVEMAVCPGVEGEFGVLPQHVSMLSALKIGDLRYRVNGKDENVF 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +S GFA ++ N+V  ++A  A     ID +  Q       ++LS+    L++  A+    
Sbjct: 63  ISGGFADVN-NNVLSVLAESAELATDIDTARAQAAKERAEKRLSAHDDSLDETRAE---- 117

Query: 190 VHSALNSALT 199
             +AL  A+T
Sbjct: 118 --AALQRAVT 125


>gi|227823625|ref|YP_002827598.1| F0F1 ATP synthase subunit epsilon [Sinorhizobium fredii NGR234]
 gi|254809378|sp|C3M9S0.1|ATPE_RHISN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|227342627|gb|ACP26845.1| ATP synthase F1, epsilon subunit [Sinorhizobium fredii NGR234]
          Length = 134

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVADIIA 147
           V++PA+ G+M V+  H PT+  +KPGV++V   DG  T+++ V  GFA I       ++A
Sbjct: 24  VVIPATEGEMTVMANHAPTMTTVKPGVVTVKTADGK-TERFAVFGGFADILPTGCT-LLA 81

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
             AV +D++D ++++  + E   +L  A
Sbjct: 82  ESAVHVDELDRTVLENRIDEARAELEGA 109


>gi|94986848|ref|YP_594781.1| F0F1 ATP synthase subunit epsilon [Lawsonia intracellularis
           PHE/MN1-00]
 gi|442555679|ref|YP_007365504.1| F0F1 ATP synthase subunit epsilon [Lawsonia intracellularis N343]
 gi|119367742|sp|Q1MRB7.1|ATPE_LAWIP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|94731097|emb|CAJ54459.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Lawsonia intracellularis PHE/MN1-00]
 gi|441493126|gb|AGC49820.1| F0F1 ATP synthase subunit epsilon [Lawsonia intracellularis N343]
          Length = 133

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY--FVSSGFAFIHANSVAD 144
           V  V +P   G++G+LPGH+P +A L  G L  H   D+K Y  F+S+GFA +  N V  
Sbjct: 21  VTYVNLPGVNGELGILPGHIPLMAALDIGKL--HYQQDSKNYYVFISAGFAEVSNNKVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++   A    +ID +  Q        +L  A  D++ A A+
Sbjct: 78  VLTEAAEKASEIDVARAQAAKERAKARLLKAEEDIDMARAE 118


>gi|115531921|ref|YP_784077.1| ATP synthase CF1 epsilon subunit [Pelargonium x hortorum]
 gi|122164273|sp|Q06FV4.1|ATPE_PELHO RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|112382075|gb|ABI17268.1| ATP synthase CF1 epsilon subunit [Pelargonium x hortorum]
          Length = 134

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 7/123 (5%)

Query: 70  LTVNF-VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           +T+N  VL     L   EV  +I+P ++GQ+GVLP H   +  +  GVL +   ND  ++
Sbjct: 1   MTLNLCVLTPNRILWDSEVKEIILPTNSGQIGVLPNHASIVTTIDIGVLRIRHFND--QW 58

Query: 129 F---VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           F   +  GF  I  N +  I+A  A     IDP   Q+ L      L  A    ++ EA+
Sbjct: 59  FTIALMGGFTRIRNNEIT-ILATAAEKGSDIDPQEAQQTLQIAEDSLRKAEDKRQRIEAK 117

Query: 186 IGV 188
           + +
Sbjct: 118 LAI 120


>gi|339017956|ref|ZP_08644101.1| ATP synthase F1 epsilon subunit [Acetobacter tropicalis NBRC
           101654]
 gi|338752959|dbj|GAA07405.1| ATP synthase F1 epsilon subunit [Acetobacter tropicalis NBRC
           101654]
          Length = 137

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 4/77 (5%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND--TKKYFVSSGFAFIHA 139
           L ++EVDMV++P + G +  +P H P +  L+ GV+S+++ ND  T ++FV  GFA + A
Sbjct: 14  LVSREVDMVVMPGAEGDIAAMPDHAPMMLLLRGGVVSLYE-NDTVTDRFFVGGGFADMTA 72

Query: 140 NSVADIIAVEAVPIDQI 156
                I+A +A P+  I
Sbjct: 73  TRCT-ILADKAEPVSAI 88


>gi|78486501|ref|YP_392426.1| ATP synthase F1 subunit epsilon [Thiomicrospira crunogena XCL-2]
 gi|119367806|sp|Q31DM1.1|ATPE_THICR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|78364787|gb|ABB42752.1| ATP synthase F1, epsilon subunit [Thiomicrospira crunogena XCL-2]
          Length = 144

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + V+ V    S  S K  DMV   A+ G++G+LP H   + +LKPG + V  G++   +F
Sbjct: 5   MQVDIVSAEGSLFSGK-ADMVFAQAADGEVGILPKHTQLLTQLKPGQVRVVSGDEEDSFF 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           ++SG   +   SV  I+A  A+  + +D +  ++        +  A +D + A AQI
Sbjct: 64  INSGVLEVQP-SVVTILADTAIRAEDLDQAAAEEAKRRAEDAMEQAKSDTDIARAQI 119


>gi|389690889|ref|ZP_10179782.1| ATP synthase, F1 epsilon subunit [Microvirga sp. WSM3557]
 gi|388589132|gb|EIM29421.1| ATP synthase, F1 epsilon subunit [Microvirga sp. WSM3557]
          Length = 133

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 2/108 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKYFVSSGFAFIHAN 140
           L + +V  V++PA+ G M V+PGH PTI  L PG++++ D      + FV SGF  I  N
Sbjct: 15  LFSGDVRAVMLPATEGDMTVMPGHEPTIVMLNPGIVALTDAQGHGHRAFVRSGFVEI-TN 73

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           S   ++A   +P +++    + + +  F     +   +  + EA+  +
Sbjct: 74  SGVSVLAERVLPPEELTRDRLDEEILRFETMRDALRDEKARREAEFAI 121


>gi|367471802|ref|ZP_09471403.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 285]
 gi|365275895|emb|CCD83871.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 285]
          Length = 135

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V VP   G  GVL GH P +A L+PG+L+V  G   +K  V  G A I    +  I
Sbjct: 19  EVDQVDVPGEQGDFGVLAGHAPFVATLRPGILTVTTGGSQQKIIVLGGLAEISEKGLT-I 77

Query: 146 IAVEAVPIDQIDPS 159
           +A  A  + ++D +
Sbjct: 78  LADVATSLKELDQT 91


>gi|427712494|ref|YP_007061118.1| ATP synthase F1 subunit epsilon [Synechococcus sp. PCC 6312]
 gi|427376623|gb|AFY60575.1| ATP synthase, F1 epsilon subunit [Synechococcus sp. PCC 6312]
          Length = 138

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P++TGQ+G+L  H P +  L+ GV+ V  G D     +  GFA +  N +  ++   
Sbjct: 22  VILPSTTGQLGILANHAPLLTALETGVMRVRSGKDWLSIALMGGFAEVENNELT-VLVNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSA 175
           AV  D ID    +   A+  ++L+ A
Sbjct: 81  AVRGDSIDLETAKANYAQAREQLAKA 106


>gi|217976538|ref|YP_002360685.1| F0F1 ATP synthase subunit epsilon [Methylocella silvestris BL2]
 gi|254809373|sp|B8EQQ2.1|ATPE_METSB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|217501914|gb|ACK49323.1| ATP synthase F1, epsilon subunit [Methylocella silvestris BL2]
          Length = 133

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 2/96 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSV 142
           A  V+ V+VP + GQ  VL  H P +  LKPGV+ + +      ++FV  GFA +    +
Sbjct: 17  AGAVESVVVPGTEGQFTVLKDHAPLMTTLKPGVIDIAESKALLHRFFVRGGFAEVSPAGL 76

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
             I+A +A+P++ +D + +   + +  + ++ A+ D
Sbjct: 77  T-ILAEQAIPLESLDAARIDADIKDAEEDIADASVD 111


>gi|83592563|ref|YP_426315.1| H+-transporting two-sector ATPase subunit delta/epsilon
           [Rhodospirillum rubrum ATCC 11170]
 gi|386349289|ref|YP_006047537.1| H+-transporting two-sector ATPase subunit delta/epsilon
           [Rhodospirillum rubrum F11]
 gi|114605|sp|P05442.1|ATPE_RHORU RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119367773|sp|Q2RV17.1|ATPE_RHORT RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|9367331|emb|CAB97256.1| unnamed protein product [Rhodospirillum rubrum]
 gi|83575477|gb|ABC22028.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Rhodospirillum rubrum ATCC 11170]
 gi|346717725|gb|AEO47740.1| H+-transporting two-sector ATPase subunit delta/epsilon
           [Rhodospirillum rubrum F11]
          Length = 134

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHAN 140
           L ++ V+MV+VP + G  G +P H P ++ ++PGV+S ++G    ++ FV+ GFA +  +
Sbjct: 16  LFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQRRIFVAGGFAEVTED 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKL 172
               ++A EA  +  +    V+  L   + +L
Sbjct: 76  RCT-VLADEAFDLASLSEEAVRARLQAADDRL 106


>gi|349687994|ref|ZP_08899136.1| ATP synthase F1 subunit epsilon [Gluconacetobacter oboediens
           174Bp2]
 gi|349700962|ref|ZP_08902591.1| ATP synthase F1 subunit epsilon [Gluconacetobacter europaeus LMG
           18494]
          Length = 141

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 18/123 (14%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFI--- 137
           L A + DMV++P S G +  +P H P +  L+ GV+ V++G+    ++FV+ GFA I   
Sbjct: 14  LFAHDADMVVMPGSEGDIAAMPEHAPLMLTLRGGVVDVYEGDVVMHRFFVAGGFADIAPT 73

Query: 138 HANSVAD-IIAVEAVPIDQIDPSL--VQKGLAEFNQ-----------KLSSATTDLEKAE 183
           H   +AD  + VE V +D  +  L  ++K   E ++           K+ SA  ++E  +
Sbjct: 74  HCTILADRALKVEDVSVDDAEARLAALEKSYEEADKMNVPALDILMDKIQSARAEIEAGQ 133

Query: 184 AQI 186
           + I
Sbjct: 134 SAI 136


>gi|427390470|ref|ZP_18884876.1| ATP synthase F1, epsilon subunit [Actinobaculum massiliae
           ACS-171-V-Col2]
 gi|425732785|gb|EKU95592.1| ATP synthase F1, epsilon subunit [Actinobaculum massiliae
           ACS-171-V-Col2]
          Length = 85

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF-VSSG 133
           ++  + +L   E +MV+VPA TG++G+L  HVP +A L PG + V   +  ++ F    G
Sbjct: 5   IVSQSGQLWDGEAEMVVVPAETGEVGILQNHVPFLALLVPGEVRVKANDGQQRIFRCGEG 64

Query: 134 FAFIHANSVADIIAVE 149
           F  + AN V  I+AVE
Sbjct: 65  FVTVDANEV--IVAVE 78


>gi|71842250|ref|YP_277338.1| ATP synthase CF1 epsilon subunit [Emiliania huxleyi]
 gi|122233606|sp|Q4G3C9.1|ATPE_EMIHU RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60101493|gb|AAX13837.1| ATP synthase CF1 epsilon subunit [Emiliania huxleyi]
 gi|336286163|gb|AEI29499.1| ATP synthase CF1 epsilon subunit [Emiliania huxleyi]
          Length = 130

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           +I+P+STGQ+G+L  H P +  L  GV+ +  G +   + +  GFA +  N +  I+   
Sbjct: 22  LILPSSTGQLGILTDHAPLLTALDIGVMRLKTGGNWISFVLMEGFAEVEDNKIT-ILCNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           A     ID S  Q  L +    +  A T  EK EA I
Sbjct: 81  AEEGASIDASTAQAALEKVTLLVDEAATKKEKIEATI 117


>gi|294851036|ref|ZP_06791712.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
 gi|294821679|gb|EFG38675.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
          Length = 138

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  T  Y V  GFA I  
Sbjct: 19  LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-TDSYVVFGGFADITP 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q  +    + L  A+++  + +A+I
Sbjct: 78  QGCT-VLAESATHVDDIDPADIQHRIDHARKVLEDASSNEHRTKAEI 123


>gi|148240337|ref|YP_001225724.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. WH 7803]
 gi|166222504|sp|A5GNB2.1|ATPE_SYNPW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|147848876|emb|CAK24427.1| ATP synthase epsilon chain [Synechococcus sp. WH 7803]
          Length = 136

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P  S       D VI+P++TGQ+G+LPGHV  +A L  GVL V      K   
Sbjct: 3   LTLRVLAPDQSVFDGS-ADEVILPSTTGQLGILPGHVSLLAALDVGVLRVRADGGWKSIA 61

Query: 130 VSSGFAFIHANSV 142
           +  GFA + A+ V
Sbjct: 62  LMGGFAEVDADDV 74


>gi|392412006|ref|YP_006448613.1| ATP synthase, F1 epsilon subunit [Desulfomonile tiedjei DSM 6799]
 gi|390625142|gb|AFM26349.1| ATP synthase, F1 epsilon subunit [Desulfomonile tiedjei DSM 6799]
          Length = 136

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           KEV+ ++ P   G+ GVL GH P +  +KPG+ S  + +   K+ V +GF  +  +SV+ 
Sbjct: 20  KEVEEIVAPGIMGEFGVLIGHTPMLTFIKPGIFSYLENDRFVKFAVGAGFCEVLKDSVS- 78

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           ++  EA   + I+ S VQ  +    ++L+ 
Sbjct: 79  VLVDEAYRAEDINTSDVQADIQNLERQLAE 108


>gi|425454412|ref|ZP_18834152.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9807]
 gi|389804915|emb|CCI15680.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9807]
          Length = 138

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P+STGQ+G+L GH P +  L  GV+ +  G D +   V  GFA +  N +  ++   
Sbjct: 22  VILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEI-KVLVNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
           A    +ID    +K  AE+ Q    A T L++A
Sbjct: 81  AELGSKIDK---EKARAEYEQ----AQTRLDEA 106


>gi|376272483|ref|YP_005151061.1| ATP synthase F1 subunit epsilon [Brucella abortus A13334]
 gi|376275606|ref|YP_005116045.1| ATP synthase F1 subunit epsilon [Brucella canis HSK A52141]
 gi|384212154|ref|YP_005601237.1| ATP synthase F1 subunit epsilon [Brucella melitensis M5-90]
 gi|384409254|ref|YP_005597875.1| H+-transporting two-sector ATPase, delta/epsilon subunit [Brucella
           melitensis M28]
 gi|326409801|gb|ADZ66866.1| H+-transporting two-sector ATPase, delta/epsilon subunit [Brucella
           melitensis M28]
 gi|326539518|gb|ADZ87733.1| ATP synthase F1, epsilon subunit [Brucella melitensis M5-90]
 gi|363400089|gb|AEW17059.1| ATP synthase F1, epsilon subunit [Brucella abortus A13334]
 gi|363404173|gb|AEW14468.1| ATP synthase F1, epsilon subunit [Brucella canis HSK A52141]
          Length = 126

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  T  Y V  GFA I  
Sbjct: 7   LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-TDSYVVFGGFADITP 65

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q  +    + L  A+++  + +A+I
Sbjct: 66  QGCT-VLAESATHVDDIDPADIQHRIDHARKVLEDASSNEHRTKAEI 111


>gi|126728279|ref|ZP_01744095.1| ATP synthase F1, epsilon subunit [Sagittula stellata E-37]
 gi|126711244|gb|EBA10294.1| ATP synthase F1, epsilon subunit [Sagittula stellata E-37]
          Length = 144

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +  + V P    LSA EV  V +P + G M  +P H PTI  L+PG+L+V     T+ + 
Sbjct: 5   MQFDLVSPERKLLSA-EVTSVQIPGADGDMTAMPNHAPTITTLRPGLLTVETTGGTEVFV 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQID 157
           V+ GFA I  N    ++A +A+P   +D
Sbjct: 64  VTGGFAEIGEN--VSVLAEKALPKGDMD 89


>gi|403049771|ref|ZP_10904255.1| ATP synthase F0F1 subunit epsilon, partial [SAR86 cluster bacterium
           SAR86D]
          Length = 129

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHAN 140
           E+ + E  MV    + G++G+ PGH P +  L  G + + +G++ + +F S GF  +  +
Sbjct: 2   EIYSGEATMVYATGTLGELGIAPGHTPLLTGLAAGPVRIQNGSEEEAFFCSGGFLEVQPD 61

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS--ATTDLEKAEAQI 186
            V  +++  A   D +D S   K      Q+L++  AT D  KA AQ+
Sbjct: 62  LVT-VLSDTAERADSLDESEAIKAKEAAEQELANKDATLDYAKASAQL 108


>gi|225628352|ref|ZP_03786386.1| ATP synthase F1, epsilon subunit [Brucella ceti str. Cudo]
 gi|237816164|ref|ZP_04595159.1| ATP synthase F1, epsilon subunit [Brucella abortus str. 2308 A]
 gi|297249055|ref|ZP_06932763.1| ATP synthase F1, epsilon subunit [Brucella abortus bv. 5 str.
           B3196]
 gi|225616198|gb|EEH13246.1| ATP synthase F1, epsilon subunit [Brucella ceti str. Cudo]
 gi|237788626|gb|EEP62839.1| ATP synthase F1, epsilon subunit [Brucella abortus str. 2308 A]
 gi|297174188|gb|EFH33545.1| ATP synthase F1, epsilon subunit [Brucella abortus bv. 5 str.
           B3196]
          Length = 138

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  T  Y V  GFA I  
Sbjct: 19  LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-TDSYVVFGGFADITP 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q  +    + L  A+++  + +A+I
Sbjct: 78  QGCT-VLAESATHVDDIDPADIQHRIDHARKVLEDASSNEHRTKAEI 123


>gi|238922551|ref|YP_002936064.1| F0F1-type ATP synthase epsilon subunit [Eubacterium rectale ATCC
           33656]
 gi|238874223|gb|ACR73930.1| F0F1-type ATP synthase epsilon subunit [Eubacterium rectale ATCC
           33656]
 gi|291526388|emb|CBK91975.1| ATP synthase F1 subcomplex epsilon subunit [Eubacterium rectale DSM
           17629]
 gi|291526833|emb|CBK92419.1| ATP synthase F1 subcomplex epsilon subunit [Eubacterium rectale
           M104/1]
          Length = 135

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E D +      G++GV   H+P    L PG++++H+G++ K   + SGFA I  + V  +
Sbjct: 21  ETDFLEFNTQNGEIGVYKNHIPLTTVLAPGIVTIHNGDEEKIAAIHSGFAEILGDKVTFL 80

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
             +   P D+ID    Q       Q+LS+ T +++   A+  +
Sbjct: 81  AELAEWP-DEIDIDRAQAAKERAEQRLSNHTAEIDVKRAEFAL 122


>gi|320102101|ref|YP_004177692.1| ATP synthase F1 subunit epsilon [Isosphaera pallida ATCC 43644]
 gi|319749383|gb|ADV61143.1| ATP synthase F1, epsilon subunit [Isosphaera pallida ATCC 43644]
          Length = 150

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 67  PSKLTVNFVLPYASELSAKEV-DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           P K T+  ++    ++  +EV D V +P   G++GVLPGH P +  L  G L +  G  +
Sbjct: 10  PPKKTLKLLVVTPEKVVLEEVVDFVALPLLDGELGVLPGHQPIVGRLSHGELRLRAGAVS 69

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGL 165
           + YFV  GF  +    V  ++   ++    IDP L  + L
Sbjct: 70  RAYFVDGGFVQVKPGLVT-VLTSRSMAASGIDPELAHRDL 108


>gi|338983811|ref|ZP_08632965.1| ATP synthase F1, epsilon subunit [Acidiphilium sp. PM]
 gi|338207266|gb|EGO95249.1| ATP synthase F1, epsilon subunit [Acidiphilium sp. PM]
          Length = 137

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L A+ V MV++P + G +GVLPGH   I  L+ G++ ++ D     ++FVS GFA I   
Sbjct: 14  LLARPVSMVVIPGTEGDLGVLPGHSKMITSLRGGLIDLYEDEKLVDRFFVSGGFAQITEE 73

Query: 141 SVADIIAVEAVPIDQIDP 158
               ++A     + +IDP
Sbjct: 74  RCT-VLADAITKLAEIDP 90


>gi|162134368|gb|ABX82646.1| CF1 epsilon subunit of ATP synthase [Trebouxia aggregata]
          Length = 134

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           ++ + +I+P +TGQMGVL  H P I  L  GV+ +   N+     +  GFA +  N V  
Sbjct: 17  EQAEEIILPTNTGQMGVLASHAPLITALDIGVMLIRSKNEWISVALMGGFALVKQNQVT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++  EA     I+         E     +SA T LE+AE Q
Sbjct: 76  VLVNEAESAKTINSE-------EAESVFASAKTKLEEAEGQ 109


>gi|297544154|ref|YP_003676456.1| ATP synthase F1 subunit epsilon [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841929|gb|ADH60445.1| ATP synthase F1, epsilon subunit [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 137

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+ +IV  +TGQ+G+L GH+P  A +  G L + +    ++ F+S GF  +  +SV  +
Sbjct: 20  DVEEIIVTITTGQIGILKGHIPMTAAIGTGTLQIKEDGQWREAFISGGFMEVKRDSVTIL 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
            +    P ++ID +  Q       +KL    +  E   A+      +AL  ALT
Sbjct: 80  SSAVEWP-EEIDIARAQAAKERAEEKLRQRRSKHEHLLAE------AALKRALT 126


>gi|406705625|ref|YP_006755978.1| ATP synthase F1 subunit epsilon [alpha proteobacterium HIMB5]
 gi|406651401|gb|AFS46801.1| ATP synthase, F1 epsilon subunit [alpha proteobacterium HIMB5]
          Length = 130

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  +  +  V P  S LS ++V  VIVPA  G+MG+L  H+  I+ LKPG++ V+  +  
Sbjct: 1   MSEEFKIEIVNPEQSFLSKEDVTEVIVPAYEGEMGILKDHISIISFLKPGIIKVNSKSGE 60

Query: 126 KKYFVSSGFAFIHANSVA 143
           + ++V  G      N+++
Sbjct: 61  ESFYVEDGIVEFKDNNLS 78


>gi|296331317|ref|ZP_06873789.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676303|ref|YP_003867975.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|350267949|ref|YP_004879256.1| ATP synthase F1 subunit epsilon [Bacillus subtilis subsp.
           spizizenii TU-B-10]
 gi|443631111|ref|ZP_21115292.1| AtpC [Bacillus subtilis subsp. inaquosorum KCTC 13429]
 gi|296151432|gb|EFG92309.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414547|gb|ADM39666.1| F0F1 ATP synthase subunit epsilon [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|349600836|gb|AEP88624.1| ATP synthase F1, epsilon subunit [Bacillus subtilis subsp.
           spizizenii TU-B-10]
 gi|443348916|gb|ELS62972.1| AtpC [Bacillus subtilis subsp. inaquosorum KCTC 13429]
          Length = 132

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 4/114 (3%)

Query: 72  VNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVS 131
           VN V P      A +++MV V A +G +G+LPGH+PT+A LK G + +     T+   VS
Sbjct: 6   VNIVTPDGPVYDA-DIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTELVAVS 64

Query: 132 SGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT--TDLEKAE 183
            GF  +  + V  I+A  A   + ID            ++L+S +  TD+ +AE
Sbjct: 65  GGFVEVRPDQVT-ILAQAAETAEGIDKERAAAARQRAQERLNSQSDDTDIRRAE 117


>gi|428225728|ref|YP_007109825.1| ATP synthase F1 subcomplex subunit epsilon [Geitlerinema sp. PCC
           7407]
 gi|427985629|gb|AFY66773.1| ATP synthase F1 subcomplex epsilon subunit [Geitlerinema sp. PCC
           7407]
          Length = 137

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +     + + VI+P++TGQ+G+LPGH P ++ L  GV+ V    D     
Sbjct: 3   LTVRVISPDRTVWDG-QAEEVILPSTTGQLGILPGHAPLLSALDIGVMRVRANRDWATIA 61

Query: 130 VSSGFAFIHANSVADII 146
           +  GFA + +N V  ++
Sbjct: 62  LMGGFAEVESNEVTILV 78


>gi|260892013|ref|YP_003238110.1| ATP synthase F1 subunit epsilon [Ammonifex degensii KC4]
 gi|260864154|gb|ACX51260.1| ATP synthase F1, epsilon subunit [Ammonifex degensii KC4]
          Length = 139

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV MV+     G++G+LP H P I  LK  V+ +      +   VS+GF  +  N V  I
Sbjct: 17  EVRMVVARGVEGELGILPDHAPLITRLKTDVVRIQKDGQWRVMAVSNGFLEVKNNQVT-I 75

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +A  A   ++ID    ++      ++L + T D++ A A+
Sbjct: 76  LADAAELAEEIDVERARRAKERAEERLRARTPDIDIARAE 115


>gi|15889876|ref|NP_355557.1| ATP synthase epsilon chain [Agrobacterium fabrum str. C58]
 gi|335033538|ref|ZP_08526903.1| F0F1 ATP synthase subunit epsilon [Agrobacterium sp. ATCC 31749]
 gi|22095474|sp|Q8UC77.1|ATPE_AGRT5 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|15157823|gb|AAK88342.1| ATP synthase epsilon chain [Agrobacterium fabrum str. C58]
 gi|333794829|gb|EGL66161.1| F0F1 ATP synthase subunit epsilon [Agrobacterium sp. ATCC 31749]
          Length = 136

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M VL  H PT+  +KPG+++V     +T KY V  GFA I   
Sbjct: 16  LVSETVTEVVIPATLGEMTVLANHAPTMTTIKPGLVTVKFASGETHKYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
               ++A  AV  D + P  +QK +            D  KAE Q G   H  L
Sbjct: 76  GCT-LLAESAVSADDMSPDTLQKRI------------DAAKAEIQEGNHHHEHL 116


>gi|73662091|ref|YP_300872.1| F0F1 ATP synthase subunit epsilon [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|418575573|ref|ZP_13139723.1| F0F1 ATP synthase subunit epsilon [Staphylococcus saprophyticus
           subsp. saprophyticus KACC 16562]
 gi|82592639|sp|Q49Z49.1|ATPE_STAS1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|72494606|dbj|BAE17927.1| F0F1-type ATP synthase epsilon subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|379325975|gb|EHY93103.1| F0F1 ATP synthase subunit epsilon [Staphylococcus saprophyticus
           subsp. saprophyticus KACC 16562]
          Length = 134

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 10/128 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L++N V P  S    ++V++ ++  + G++GV+ GH+PT+A L+ G + ++    ++   
Sbjct: 4   LSLNIVTPNGSVYDREDVNLAVLQTTAGEIGVMYGHIPTVAALEIGYVKINFDGGSEYIA 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ--KGLAEF-------NQKLSSATTDLE 180
           VS GF  +  + ++ II   A P ++ID +  +  K  AE        N  ++ A   LE
Sbjct: 64  VSEGFVEVRQDKLS-IIVQTAEPANEIDVARAELAKSRAESHLNNEEDNSDVNRAKRALE 122

Query: 181 KAEAQIGV 188
           +A  +I V
Sbjct: 123 RANNRIRV 130


>gi|365880195|ref|ZP_09419575.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 375]
 gi|365291762|emb|CCD92106.1| ATP synthase subunit epsilon, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 375]
          Length = 135

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V VP   G  GVL GH P +A L+PG+L+V  G   +K  V  G A I    +  I
Sbjct: 19  EVDQVDVPGEQGDFGVLAGHAPFVATLRPGILTVTTGGTQQKIIVLGGLAEISEKGLT-I 77

Query: 146 IAVEAVPIDQIDPS 159
           +A  A  + ++D +
Sbjct: 78  LADVATSLKELDQT 91


>gi|336115468|ref|YP_004570235.1| ATP synthase F1 subunit epsilon [Bacillus coagulans 2-6]
 gi|335368898|gb|AEH54849.1| ATP synthase F1, epsilon subunit [Bacillus coagulans 2-6]
          Length = 136

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV+MVI  A +G++G+L GHVP +A L  GV+   +G+  K   VS G     +N V  I
Sbjct: 19  EVEMVIAKAKSGEIGILYGHVPLVAPLDIGVVRFKNGDQEKVVAVSGGILETRSNQVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +A  A   +QID    ++      ++L  +  D
Sbjct: 78  LAQAAETPEQIDIRRAEEAKQRAEKRLHQSHQD 110


>gi|402502387|gb|AFQ60644.1| Nano-lantern_ATP0 [synthetic construct]
          Length = 677

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 11/147 (7%)

Query: 46  MEPPKTPSVYMTPRPQTPTSIP-------SKLTVNFVLPYASELSAKEVDMVIVPASTGQ 98
           +EP K       P    P  IP         + VN   P      A +++MV V A +G 
Sbjct: 431 LEPFKEKGEVRRPTLSWPREIPLVKGPWMKTVKVNITTPDGPVYDA-DIEMVSVRAESGD 489

Query: 99  MGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDP 158
           +G+LPGH+PT A LK G + +     T+   VS G   +  + V  I A  A   + ID 
Sbjct: 490 LGILPGHIPTKAPLKIGAVRLKKDGQTEMVAVSGGTVEVRPDHVT-INAQAAETAEGIDK 548

Query: 159 SLVQKGLAEFNQKLSSAT--TDLEKAE 183
              +       ++L+S +  TD+ +AE
Sbjct: 549 ERAEAARQRAQERLNSQSDDTDIRRAE 575


>gi|402502383|gb|AFQ60642.1| Nano-lantern_ATP1 [synthetic construct]
          Length = 680

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 11/147 (7%)

Query: 46  MEPPKTPSVYMTPRPQTPTSIP-------SKLTVNFVLPYASELSAKEVDMVIVPASTGQ 98
           +EP K       P    P  IP         + VN   P      A +++MV V A +G 
Sbjct: 434 LEPFKEKGEVRRPTLSWPREIPLVKGPWMKTVKVNITTPDGPVYDA-DIEMVSVRAESGD 492

Query: 99  MGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDP 158
           +G+LPGH+PT A LK G + +     T+   VS G   +  + V  I A  A   + ID 
Sbjct: 493 LGILPGHIPTKAPLKIGAVRLKKDGQTEMVAVSGGTVEVRPDHVT-INAQAAETAEGIDK 551

Query: 159 SLVQKGLAEFNQKLSSAT--TDLEKAE 183
              +       ++L+S +  TD+ +AE
Sbjct: 552 ERAEAARQRAQERLNSQSDDTDIRRAE 578


>gi|262199220|ref|YP_003270429.1| ATP synthase F1 subunit epsilon [Haliangium ochraceum DSM 14365]
 gi|262082567|gb|ACY18536.1| ATP synthase F1, epsilon subunit [Haliangium ochraceum DSM 14365]
          Length = 140

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           + L VN V P    ++  E D V  P   G+  VLPGHVP +  L PGVL++ +  + + 
Sbjct: 5   TTLRVNMVTPVGP-IATDETDAVTAPGEFGEFEVLPGHVPFLTALHPGVLTLGERQERRV 63

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           + V  G+  +      +I+   AV   ++D    +   +E   +L +
Sbjct: 64  FAVGRGYLRVDRAGGIEILVANAVEGGRVDVDAAETLRSELEAELET 110


>gi|452973671|gb|EME73493.1| F0F1 ATP synthase subunit epsilon [Bacillus sonorensis L12]
          Length = 131

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L VN V P      A +++MV V A +G++G+LPGH+PT+A LK   + +     T+   
Sbjct: 4   LKVNIVTPDGPVYDA-DIEMVSVRAESGELGILPGHIPTVAPLKIAAVRLKKDGQTELVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDP--SLVQKGLAEFNQKLSSATTDLEKAE 183
           VS G   +  + V  I+A  A   ++ID   +L  K  AE   +  S   D+ +AE
Sbjct: 63  VSGGIVEVRPDHVT-ILAQTAETSEEIDKERALAAKRRAEERLQKQSPDIDIVRAE 117


>gi|167648690|ref|YP_001686353.1| F0F1 ATP synthase subunit epsilon [Caulobacter sp. K31]
 gi|167351120|gb|ABZ73855.1| H+transporting two-sector ATPase delta/epsilon subunit [Caulobacter
           sp. K31]
          Length = 86

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL  + V P   EL + EVD V  P + G  GVLPGH P +  L+ G ++V DG+  + 
Sbjct: 2   AKLHFSLVAP-ERELFSAEVDQVDAPGAEGDFGVLPGHAPFMTTLREGKVTVRDGSKLRV 60

Query: 128 YFVSSGFA 135
           + +  GFA
Sbjct: 61  FDIQGGFA 68


>gi|17986536|ref|NP_539170.1| ATP synthase F0F1 subunit epsilon [Brucella melitensis bv. 1 str.
           16M]
 gi|23502651|ref|NP_698778.1| ATP synthase F0F1 subunit epsilon [Brucella suis 1330]
 gi|62290663|ref|YP_222456.1| ATP synthase F0F1 subunit epsilon [Brucella abortus bv. 1 str.
           9-941]
 gi|82700578|ref|YP_415152.1| F0F1 ATP synthase subunit epsilon [Brucella melitensis biovar
           Abortus 2308]
 gi|161619718|ref|YP_001593605.1| F0F1 ATP synthase subunit epsilon [Brucella canis ATCC 23365]
 gi|189024875|ref|YP_001935643.1| F0F1 ATP synthase subunit epsilon [Brucella abortus S19]
 gi|225853242|ref|YP_002733475.1| F0F1 ATP synthase subunit epsilon [Brucella melitensis ATCC 23457]
 gi|256263270|ref|ZP_05465802.1| ATP synthase subunit epsilon [Brucella melitensis bv. 2 str. 63/9]
 gi|256370202|ref|YP_003107713.1| F0F1 ATP synthase subunit epsilon [Brucella microti CCM 4915]
 gi|260547101|ref|ZP_05822839.1| H+-transporting two-sector ATPase [Brucella abortus NCTC 8038]
 gi|260565714|ref|ZP_05836197.1| H+-transporting two-sector ATPase [Brucella melitensis bv. 1 str.
           16M]
 gi|260568869|ref|ZP_05839337.1| H+-transporting two-sector ATPase [Brucella suis bv. 4 str. 40]
 gi|260755486|ref|ZP_05867834.1| F-ATPase epsilon subunit [Brucella abortus bv. 6 str. 870]
 gi|260758709|ref|ZP_05871057.1| F-ATPase epsilon subunit [Brucella abortus bv. 4 str. 292]
 gi|260762543|ref|ZP_05874880.1| F-ATPase epsilon subunit [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884507|ref|ZP_05896121.1| ATP synthase subunit epsilon [Brucella abortus bv. 9 str. C68]
 gi|261214757|ref|ZP_05929038.1| F-ATPase epsilon subunit [Brucella abortus bv. 3 str. Tulya]
 gi|261219372|ref|ZP_05933653.1| ATP synthase subunit epsilon [Brucella ceti M13/05/1]
 gi|261222912|ref|ZP_05937193.1| ATP synthase subunit epsilon [Brucella ceti B1/94]
 gi|261315849|ref|ZP_05955046.1| ATP synthase subunit epsilon [Brucella pinnipedialis M163/99/10]
 gi|261316291|ref|ZP_05955488.1| ATP synthase subunit epsilon [Brucella pinnipedialis B2/94]
 gi|261322434|ref|ZP_05961631.1| ATP synthase subunit epsilon [Brucella ceti M644/93/1]
 gi|261325826|ref|ZP_05965023.1| ATP synthase subunit epsilon [Brucella neotomae 5K33]
 gi|261750943|ref|ZP_05994652.1| ATP synthase subunit epsilon [Brucella suis bv. 5 str. 513]
 gi|261754197|ref|ZP_05997906.1| ATP synthase subunit epsilon [Brucella suis bv. 3 str. 686]
 gi|261757443|ref|ZP_06001152.1| H+-transporting two-sector ATPase [Brucella sp. F5/99]
 gi|265984805|ref|ZP_06097540.1| ATP synthase subunit epsilon [Brucella sp. 83/13]
 gi|265987358|ref|ZP_06099915.1| ATP synthase subunit epsilon [Brucella pinnipedialis M292/94/1]
 gi|265991823|ref|ZP_06104380.1| ATP synthase subunit epsilon [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995662|ref|ZP_06108219.1| ATP synthase subunit epsilon [Brucella melitensis bv. 3 str. Ether]
 gi|265998871|ref|ZP_06111428.1| ATP synthase subunit epsilon [Brucella ceti M490/95/1]
 gi|306839482|ref|ZP_07472290.1| ATP synthase F1, epsilon subunit [Brucella sp. NF 2653]
 gi|306844778|ref|ZP_07477363.1| ATP synthase F1, epsilon subunit [Brucella inopinata BO1]
 gi|340791392|ref|YP_004756857.1| F0F1 ATP synthase subunit epsilon [Brucella pinnipedialis B2/94]
 gi|376281446|ref|YP_005155452.1| F0F1 ATP synthase subunit epsilon [Brucella suis VBI22]
 gi|384225438|ref|YP_005616602.1| F0F1 ATP synthase subunit epsilon [Brucella suis 1330]
 gi|384445807|ref|YP_005604526.1| F0F1 ATP synthase subunit epsilon [Brucella melitensis NI]
 gi|423169385|ref|ZP_17156086.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI435a]
 gi|423172465|ref|ZP_17159138.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI474]
 gi|423175599|ref|ZP_17162267.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI486]
 gi|423178842|ref|ZP_17165485.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI488]
 gi|423181972|ref|ZP_17168611.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI010]
 gi|423185026|ref|ZP_17171661.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI016]
 gi|423188179|ref|ZP_17174791.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI021]
 gi|423191320|ref|ZP_17177927.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI259]
 gi|54036776|sp|P63661.1|ATPE_BRUSU RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|54040846|sp|P63660.1|ATPE_BRUME RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|75505209|sp|Q57B89.1|ATPE_BRUAB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119361415|sp|Q2YLE7.1|ATPE_BRUA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|189081356|sp|A9M836.1|ATPE_BRUC2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740227|sp|B2S7M2.1|ATPE_BRUA1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|254809348|sp|C0RF49.1|ATPE_BRUMB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|17982142|gb|AAL51434.1| ATP synthase epsilon chain [Brucella melitensis bv. 1 str. 16M]
 gi|23348659|gb|AAN30693.1| ATP synthase F1, epsilon subunit [Brucella suis 1330]
 gi|62196795|gb|AAX75095.1| AtpC, ATP synthase F1, epsilon subunit [Brucella abortus bv. 1 str.
           9-941]
 gi|82616679|emb|CAJ11762.1| H+-transporting two-sector ATPase, delta/epsilon subunit [Brucella
           melitensis biovar Abortus 2308]
 gi|161336529|gb|ABX62834.1| ATP synthase F1, epsilon subunit [Brucella canis ATCC 23365]
 gi|189020447|gb|ACD73169.1| H+-transporting two-sector ATPase, delta/epsilon subunit [Brucella
           abortus S19]
 gi|225641607|gb|ACO01521.1| ATP synthase F1, epsilon subunit [Brucella melitensis ATCC 23457]
 gi|256000365|gb|ACU48764.1| ATP synthase subunit epsilon [Brucella microti CCM 4915]
 gi|260095466|gb|EEW79344.1| H+-transporting two-sector ATPase [Brucella abortus NCTC 8038]
 gi|260151087|gb|EEW86182.1| H+-transporting two-sector ATPase [Brucella melitensis bv. 1 str.
           16M]
 gi|260154253|gb|EEW89335.1| H+-transporting two-sector ATPase [Brucella suis bv. 4 str. 40]
 gi|260669027|gb|EEX55967.1| F-ATPase epsilon subunit [Brucella abortus bv. 4 str. 292]
 gi|260672969|gb|EEX59790.1| F-ATPase epsilon subunit [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675594|gb|EEX62415.1| F-ATPase epsilon subunit [Brucella abortus bv. 6 str. 870]
 gi|260874035|gb|EEX81104.1| ATP synthase subunit epsilon [Brucella abortus bv. 9 str. C68]
 gi|260916364|gb|EEX83225.1| F-ATPase epsilon subunit [Brucella abortus bv. 3 str. Tulya]
 gi|260921496|gb|EEX88149.1| ATP synthase subunit epsilon [Brucella ceti B1/94]
 gi|260924461|gb|EEX91029.1| ATP synthase subunit epsilon [Brucella ceti M13/05/1]
 gi|261295124|gb|EEX98620.1| ATP synthase subunit epsilon [Brucella ceti M644/93/1]
 gi|261295514|gb|EEX99010.1| ATP synthase subunit epsilon [Brucella pinnipedialis B2/94]
 gi|261301806|gb|EEY05303.1| ATP synthase subunit epsilon [Brucella neotomae 5K33]
 gi|261304875|gb|EEY08372.1| ATP synthase subunit epsilon [Brucella pinnipedialis M163/99/10]
 gi|261737427|gb|EEY25423.1| H+-transporting two-sector ATPase [Brucella sp. F5/99]
 gi|261740696|gb|EEY28622.1| ATP synthase subunit epsilon [Brucella suis bv. 5 str. 513]
 gi|261743950|gb|EEY31876.1| ATP synthase subunit epsilon [Brucella suis bv. 3 str. 686]
 gi|262553560|gb|EEZ09329.1| ATP synthase subunit epsilon [Brucella ceti M490/95/1]
 gi|262766946|gb|EEZ12564.1| ATP synthase subunit epsilon [Brucella melitensis bv. 3 str. Ether]
 gi|263002779|gb|EEZ15182.1| ATP synthase subunit epsilon [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093234|gb|EEZ17331.1| ATP synthase subunit epsilon [Brucella melitensis bv. 2 str. 63/9]
 gi|264659555|gb|EEZ29816.1| ATP synthase subunit epsilon [Brucella pinnipedialis M292/94/1]
 gi|264663397|gb|EEZ33658.1| ATP synthase subunit epsilon [Brucella sp. 83/13]
 gi|306274950|gb|EFM56720.1| ATP synthase F1, epsilon subunit [Brucella inopinata BO1]
 gi|306405427|gb|EFM61698.1| ATP synthase F1, epsilon subunit [Brucella sp. NF 2653]
 gi|340559851|gb|AEK55089.1| F0F1 ATP synthase, epsilon subunit [Brucella pinnipedialis B2/94]
 gi|343383618|gb|AEM19110.1| F0F1 ATP synthase subunit epsilon [Brucella suis 1330]
 gi|349743796|gb|AEQ09339.1| F0F1 ATP synthase subunit epsilon [Brucella melitensis NI]
 gi|358259045|gb|AEU06780.1| F0F1 ATP synthase subunit epsilon [Brucella suis VBI22]
 gi|374535228|gb|EHR06754.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI474]
 gi|374535422|gb|EHR06946.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI486]
 gi|374535571|gb|EHR07093.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI435a]
 gi|374544504|gb|EHR15977.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI488]
 gi|374544894|gb|EHR16359.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI010]
 gi|374545003|gb|EHR16467.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI016]
 gi|374553025|gb|EHR24446.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI259]
 gi|374553475|gb|EHR24893.1| ATP synthase epsilon chain [Brucella abortus bv. 1 str. NI021]
          Length = 135

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  T  Y V  GFA I  
Sbjct: 16  LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-TDSYVVFGGFADITP 74

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q  +    + L  A+++  + +A+I
Sbjct: 75  QGCT-VLAESATHVDDIDPADIQHRIDHARKVLEDASSNEHRTKAEI 120


>gi|427704355|ref|YP_007047577.1| ATP synthase F1 subunit epsilon [Cyanobium gracile PCC 6307]
 gi|427347523|gb|AFY30236.1| ATP synthase, F1 epsilon subunit [Cyanobium gracile PCC 6307]
          Length = 135

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           D VI+P +TGQ+G+L GHV  +  L+ GVL V +G + +   +  GFA + AN V  ++
Sbjct: 20  DEVILPGTTGQLGILTGHVSMLTALESGVLRVREGANWQSIALMGGFAEVVANEVTVLV 78


>gi|149913697|ref|ZP_01902230.1| ATP synthase F1, epsilon subunit [Roseobacter sp. AzwK-3b]
 gi|149812817|gb|EDM72646.1| ATP synthase F1, epsilon subunit [Roseobacter sp. AzwK-3b]
          Length = 141

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           V +P + G +  +  H P I  L+PG+++V   N T  Y V+SGFA I   SV+ ++A  
Sbjct: 24  VRIPGAEGDLTAMAQHSPLITTLRPGIVTVTGPNGTADYVVTSGFAEIDGGSVS-VLAER 82

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSA 175
           A+P D+I  +  +  + E   KL+ A
Sbjct: 83  AIPRDEITQAQYKALVDEATDKLAKA 108


>gi|90418834|ref|ZP_01226745.1| ATP synthase, epsilon subunit [Aurantimonas manganoxydans SI85-9A1]
 gi|90336914|gb|EAS50619.1| ATP synthase, epsilon subunit [Aurantimonas manganoxydans SI85-9A1]
          Length = 134

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIHAN 140
           L ++ V  V VP + G   V+  H P +  LKPG V++  +G   ++ FV  GFA ++ N
Sbjct: 16  LLSEAVTAVNVPGAEGYFTVMAHHAPVMTTLKPGVVVATLEGGAQQRIFVLGGFADVNEN 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
               ++A  A P+DQ+D + +   + +  + ++ A T   KA+AQ
Sbjct: 76  GFT-LLAERATPVDQLDSAELDSQIRDAEEDVTDAATPEAKAKAQ 119


>gi|347751883|ref|YP_004859448.1| ATP synthase F1 subunit epsilon [Bacillus coagulans 36D1]
 gi|347584401|gb|AEP00668.1| ATP synthase F1, epsilon subunit [Bacillus coagulans 36D1]
          Length = 136

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV+MVI  A +G++G+L GHVP +A L  GV+   +G+  K   VS G     +N V  I
Sbjct: 19  EVEMVIAKAKSGEIGILYGHVPLVAPLDIGVVRFKNGDQEKVVAVSGGILETRSNQVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           +A  A   +QID    ++      ++L  +  D
Sbjct: 78  LAQAAETPEQIDIRRAEEAKQRAEKRLHQSHQD 110


>gi|433447646|ref|ZP_20411086.1| ATP synthase F1, epsilon subunit [Anoxybacillus flavithermus
           TNO-09.006]
 gi|431999783|gb|ELK20695.1| ATP synthase F1, epsilon subunit [Anoxybacillus flavithermus
           TNO-09.006]
          Length = 134

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++GVLPGH+P +A L+ G + +  GN T+   VS GF  +  + V  I
Sbjct: 19  DVEMVSAKAQSGELGVLPGHIPMVAPLEIGAVRLKKGNATELVAVSGGFLEVRPDRVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
           +A  A   + ID +  +       ++L +   D++   A++   +  ALN
Sbjct: 78  LAQAAERAEDIDVARAKAAKERAERRLQAKQEDIDHKRAELA--LRRALN 125


>gi|378821595|ref|ZP_09844475.1| ATP synthase F1, epsilon subunit [Sutterella parvirubra YIT 11816]
 gi|378599540|gb|EHY32548.1| ATP synthase F1, epsilon subunit [Sutterella parvirubra YIT 11816]
          Length = 139

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGN-DTKKYFVSSGFAFIHANSVAD 144
           + ++V +P  +G++G+LPGH+P I  ++PG + +H  N + ++ FV+ G   +  + V  
Sbjct: 19  DAELVSLPGKSGELGILPGHLPLITLIRPGFVRIHLPNKEVEQVFVAGGVLEVQPD-VVT 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
           ++A  A+    +D +  QK L E      +AT +L
Sbjct: 78  VLADTAIRSQDLDEAKAQKALEEARAARQNATGEL 112


>gi|345864684|ref|ZP_08816882.1| ATP synthase epsilon chain [endosymbiont of Tevnia jerichonana
           (vent Tica)]
 gi|345876705|ref|ZP_08828470.1| ATP synthase subunit beta [endosymbiont of Riftia pachyptila (vent
           Ph05)]
 gi|344226305|gb|EGV52643.1| ATP synthase subunit beta [endosymbiont of Riftia pachyptila (vent
           Ph05)]
 gi|345124217|gb|EGW54099.1| ATP synthase epsilon chain [endosymbiont of Tevnia jerichonana
           (vent Tica)]
          Length = 140

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           +MV  PA  G++G+ P H P +  LKPG + V   ++ + ++VS G   +  + V  ++A
Sbjct: 22  EMVYAPAVMGEVGIAPRHTPLVTRLKPGEVRVMSADEMQHFYVSGGILEVQPH-VVTVLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+    +D + VQ+      + +   + + E A+AQ
Sbjct: 81  DTAIRAHDLDEAAVQEAKKRAEEAMQDKSAEFEYAKAQ 118


>gi|407796943|ref|ZP_11143893.1| F0F1 ATP synthase subunit epsilon [Salimicrobium sp. MJ3]
 gi|407018688|gb|EKE31410.1| F0F1 ATP synthase subunit epsilon [Salimicrobium sp. MJ3]
          Length = 134

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 2/121 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S LTV+ V P    L  ++ +MV   A +G++G+LPGH+P +A L    + +    D+++
Sbjct: 2   STLTVSVVTPDGPVLE-EDFNMVSAKAESGELGILPGHIPMVAPLTISAVRLKGDGDSRR 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
             VS GF  +  + V  +     +P D ID    +K      ++L     D++   A++ 
Sbjct: 61  IAVSGGFLEVRPDKVTILAQSAELPSD-IDVERARKAKERAERRLKEKQDDIDFRRAELA 119

Query: 188 V 188
           +
Sbjct: 120 L 120


>gi|296134372|ref|YP_003641619.1| ATP synthase F1 subunit epsilon [Thermincola potens JR]
 gi|296032950|gb|ADG83718.1| ATP synthase F1, epsilon subunit [Thermincola potens JR]
          Length = 136

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 1/105 (0%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           +++V+ V+VP   G +G+L  H P +A LK GV+ V       K  +S GF  +  N + 
Sbjct: 19  SEDVEFVVVPGEEGYLGILANHAPIVAALKIGVMKVIQNQKEIKLAISGGFMEVSKNKLV 78

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
            ++A  A   D+ID +  +       Q+L+S T D++   A++ +
Sbjct: 79  -VLADTAERGDEIDVARARAAKERAEQRLASRTHDIDLVRAELAL 122


>gi|126739853|ref|ZP_01755544.1| ATP synthase F1, epsilon subunit [Roseobacter sp. SK209-2-6]
 gi|126719085|gb|EBA15796.1| ATP synthase F1, epsilon subunit [Roseobacter sp. SK209-2-6]
          Length = 137

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +  + V P  S L++ +   V +P + G M  +P H PTI  L+PGVL V        Y 
Sbjct: 5   MQFDLVSPERS-LASLQASAVQIPGAEGDMTAMPSHAPTITTLRPGVLKVESPEGNADYL 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQI 156
           V+ GFA I   +++ ++A  A+P+ ++
Sbjct: 64  VTGGFAEISGEALS-VLAERAIPMTEM 89


>gi|336401351|ref|ZP_08582122.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 21_1A]
 gi|336161261|gb|EGN64268.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 21_1A]
          Length = 134

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +      K+  YF+S GF    +N+ A +IA E +P
Sbjct: 28  SEGDIGILPNHAPYVAELAMGKMEIESPEKDKRDVYFLSGGF-IEFSNNQATVIADEILP 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           I++ID    Q  + E  + L   + + E
Sbjct: 87  IEKIDIETEQVKIEELKKLLEKVSVEEE 114


>gi|384214127|ref|YP_005605290.1| ATP synthase subunit epsilon [Bradyrhizobium japonicum USDA 6]
 gi|354953023|dbj|BAL05702.1| ATP synthase epsilon chain [Bradyrhizobium japonicum USDA 6]
          Length = 135

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 71  TVNFVLPYASELS-AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           T++F L    +L+ + EVD V +P   G  GVL GH P +A ++PG+L+V  G    K  
Sbjct: 3   TIHFDLVSPEKLAFSGEVDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTVTTGGRPVKII 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V  G A +    +  ++A  A  +D++D +     ++E  + L     D
Sbjct: 63  VLGGLAEVSEKGLT-VLADVATSLDELDRAQFAATISEMEEGLKEHEGD 110


>gi|209551222|ref|YP_002283139.1| F0F1 ATP synthase subunit epsilon [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|424916507|ref|ZP_18339871.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM597]
 gi|226740278|sp|B5ZSN5.1|ATPE_RHILW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|209536978|gb|ACI56913.1| ATP synthase F1, epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|392852683|gb|EJB05204.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           trifolii WSM597]
          Length = 135

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 10/113 (8%)

Query: 73  NFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFV 130
           NF L     L   E V  V++PA+ G+M V+  H PT+  +KPGV+SV   +  K+ Y V
Sbjct: 6   NFELVSPERLLLSEMVTEVVIPATEGEMTVMAHHAPTMTTIKPGVVSVRSASGKKQDYVV 65

Query: 131 SSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             GFA I       ++A  AVP++++          E  +++ +A  +LE  E
Sbjct: 66  FGGFADILPTGCT-LLAESAVPVEELHKD-------ELTRRIEAARKELEDTE 110


>gi|336418815|ref|ZP_08599086.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 11_3_2]
 gi|336164322|gb|EGN67230.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 11_3_2]
          Length = 134

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +      K+  YF+S GF    +N+ A +IA E +P
Sbjct: 28  SEGDIGILPNHAPYVAELAMGKMEIESPEKDKRDVYFLSGGF-IEFSNNQATVIADEILP 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           I++ID    Q  + E  + L   + + E
Sbjct: 87  IEKIDIETEQVKIEELKKLLEKVSVEEE 114


>gi|289766056|ref|ZP_06525434.1| H+-transporting two-sector ATPase [Fusobacterium sp. D11]
 gi|289717611|gb|EFD81623.1| H+-transporting two-sector ATPase [Fusobacterium sp. D11]
          Length = 134

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G+LP H P +AEL  G + +      K+  YF+S GF    +N+ A +IA E +P
Sbjct: 28  SEGDIGILPNHAPYVAELAMGKMEIESPEKDKRDVYFLSGGF-IEFSNNQATVIADEILP 86

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           I++ID    Q  + E  + L   + + E
Sbjct: 87  IEKIDIETEQVKIEELKKLLEKVSVEEE 114


>gi|434399415|ref|YP_007133419.1| ATP synthase F1 subcomplex epsilon subunit [Stanieria cyanosphaera
           PCC 7437]
 gi|428270512|gb|AFZ36453.1| ATP synthase F1 subcomplex epsilon subunit [Stanieria cyanosphaera
           PCC 7437]
          Length = 138

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 5/128 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P  +  + K V+ +++P++TGQ+G+L GH P ++ L  GV+ +  G + K   
Sbjct: 3   LTLKVITPDKTVWNDK-VEEIVLPSTTGQLGILSGHAPLLSALDIGVMRIRPGKEWKAIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           +  GFA +  N V  ++   A   + ID +  +   AEF+Q  S   T  + ++ Q    
Sbjct: 62  LMGGFAEVENNEV-KVLVNGAEMGETIDKATAK---AEFDQAQSRFQTADKGSDRQQKFQ 117

Query: 190 VHSALNSA 197
              AL  A
Sbjct: 118 ATQALKRA 125


>gi|340789367|ref|YP_004754832.1| ATP synthase subunit epsilon [Collimonas fungivorans Ter331]
 gi|340554634|gb|AEK64009.1| ATP synthase epsilon chain [Collimonas fungivorans Ter331]
          Length = 138

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIH 138
            EL A    +V +P   G +G+LPGH P +  LKPG + +   +    Y +V+ G+A I 
Sbjct: 13  GELYAGSAGLVTLPGIAGSLGILPGHTPLLTRLKPGAVHIKRVSGEDDYIYVAGGYAEIQ 72

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            +SV  I+A  A+    +D +       +  ++L +  ++++ A AQ
Sbjct: 73  PHSVT-ILADTAIRGKDLDEAKATAARQQAEERLQNLASNIDYAMAQ 118


>gi|358341595|dbj|GAA49229.1| F-type H+-transporting ATPase subunit delta [Clonorchis sinensis]
          Length = 185

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 43/67 (64%)

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
           +++SSG   ++++S   ++A EA  +DQ+D   V++GL     +L SA TD  KAEAQI 
Sbjct: 67  FWMSSGTVTVNSDSSMQVLAEEAATLDQLDVHAVKEGLTRAQAELLSAQTDASKAEAQIA 126

Query: 188 VDVHSAL 194
           V+V+  L
Sbjct: 127 VEVYEEL 133


>gi|251771543|gb|EES52120.1| ATP synthase F1, epsilon subunit [Leptospirillum ferrodiazotrophum]
          Length = 144

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L  +EVD V      G+ GVL GH P I  L PG L V  G     Y+VS G A +   S
Sbjct: 14  LVTEEVDFVKAKGVDGEFGVLTGHTPFITLLDPGELVVRKGETLYSYYVSGGVAEVLPKS 73

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEK 181
           +  ++A      D+ID  + Q       + LS   +++E+
Sbjct: 74  MI-VLANTVERADEIDMQMAQTARKNAEEALSKPISEIER 112


>gi|206890151|ref|YP_002248091.1| ATP synthase F1, epsilon subunit [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|226740300|sp|B5YI25.1|ATPE_THEYD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|206742089|gb|ACI21146.1| ATP synthase F1, epsilon subunit [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 140

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + +KL +  + PY  E+  +EVD V    + G  GV PGH   +  ++ G LS       
Sbjct: 1   MENKLKLEVITPYG-EVINEEVDEVYTTGAEGDFGVFPGHCAFMTAIRIGSLSYKKDGQM 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA---TTDLEKA 182
              FV+ G+  +  + V  ++   A  +++ID    +  LA   ++L  A    TD++ A
Sbjct: 60  HYLFVNRGYCEVLNDRVLVLVG-SAERVEEIDVERAKAALARAEERLRKAQAGETDIDLA 118

Query: 183 EAQ 185
            AQ
Sbjct: 119 RAQ 121


>gi|428305699|ref|YP_007142524.1| ATP synthase F1 subcomplex subunit epsilon [Crinalium epipsammum
           PCC 9333]
 gi|428247234|gb|AFZ13014.1| ATP synthase F1 subcomplex epsilon subunit [Crinalium epipsammum
           PCC 9333]
          Length = 138

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +   A   ++V+ P++TGQ+G+L GH P ++ L  GV+ V DG +     
Sbjct: 3   LTVRVISPDKTVWDAAAEELVL-PSTTGQLGILTGHAPLLSALDTGVMRVRDGKNWVAIA 61

Query: 130 VSSGFAFIHANSVADII 146
           +  GFA I  N V  ++
Sbjct: 62  LMGGFAEIENNDVTILV 78


>gi|115388395|ref|XP_001211703.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195787|gb|EAU37487.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 107

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 1/69 (1%)

Query: 65  SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGN 123
           ++  K+ ++  LP+ +   +  V  V +PA +G+MGVL  HVP+I +LKPG++  V +G 
Sbjct: 30  AVNDKIKLSLALPHQTIFKSTGVVQVNIPAESGEMGVLANHVPSIEQLKPGLVEIVEEGG 89

Query: 124 DTKKYFVSS 132
             +K+F +S
Sbjct: 90  AIQKFFRTS 98


>gi|306841511|ref|ZP_07474210.1| ATP synthase F1, epsilon subunit [Brucella sp. BO2]
 gi|306288422|gb|EFM59779.1| ATP synthase F1, epsilon subunit [Brucella sp. BO2]
          Length = 159

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S G +  L GH P +  + PGV+SV   DG  T  Y V  GFA I  
Sbjct: 40  LLSAQVTEVVIPGSEGYLTALAGHSPLMTTIMPGVVSVKLADGK-TDSYVVFGGFADITP 98

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q  +    + L  A+++  + +A+I
Sbjct: 99  QGCT-VLAESATHVDDIDPADIQHRIDHARKVLEDASSNEHRTKAEI 144


>gi|347753932|ref|YP_004861496.1| ATP synthase F1 subunit epsilon [Candidatus Chloracidobacterium
           thermophilum B]
 gi|347586450|gb|AEP10980.1| ATP synthase, F1 epsilon subunit (delta in mitochondria)
           [Candidatus Chloracidobacterium thermophilum B]
          Length = 139

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 10/117 (8%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELK-PGVLSVHDGNDTKKY 128
           LT++ V P  +   ++ VD V++PA  G++GVLPGH   +++L   G+L+   G      
Sbjct: 3   LTLDIVTPERA-FPSQTVDEVVLPALDGEIGVLPGHAALMSQLGVAGLLTYRQGGKETLA 61

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           FV+ GF  +  N V  ++   A   + ID       + E   +L  A   L KAEA+
Sbjct: 62  FVAQGFVEVLGNRVT-VLTERAELAEDID-------IEEARTRLREAELALRKAEAE 110


>gi|113952887|ref|YP_731482.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. CC9311]
 gi|119367801|sp|Q0I7U0.1|ATPE_SYNS3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|113880238|gb|ABI45196.1| ATP synthase F1, epsilon subunit [Synechococcus sp. CC9311]
          Length = 135

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           D VI+P++TGQ+G+LPGHV  +A L  GVL V   ++ +   +  GFA + ++ V  ++ 
Sbjct: 20  DEVILPSTTGQVGILPGHVSLLAALDVGVLRVRTNSNWQSIALMGGFAEVESDDVTVLVN 79

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              + ++ ID +  +         LS+A T + K E Q
Sbjct: 80  SAELGVN-IDSTSAES-------DLSAARTAVTKLEGQ 109


>gi|83854831|ref|ZP_00948361.1| ATP synthase F1, epsilon subunit [Sulfitobacter sp. NAS-14.1]
 gi|83941354|ref|ZP_00953816.1| ATP synthase F1, epsilon subunit [Sulfitobacter sp. EE-36]
 gi|83842674|gb|EAP81841.1| ATP synthase F1, epsilon subunit [Sulfitobacter sp. NAS-14.1]
 gi|83847174|gb|EAP85049.1| ATP synthase F1, epsilon subunit [Sulfitobacter sp. EE-36]
          Length = 145

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ +V  V +P + G M  +P H PTI  L+PGVL V     T +Y V+ GFA I +  
Sbjct: 16  LASMQVTAVQIPGADGDMTAMPDHAPTITTLRPGVLRVEGPEGTAEYVVTGGFAEISSEG 75

Query: 142 VADIIAVEAV 151
           V+ ++A  AV
Sbjct: 76  VS-VLAERAV 84


>gi|254250971|ref|ZP_04944289.1| ATP synthase subunit epsilon [Burkholderia dolosa AUO158]
 gi|124893580|gb|EAY67460.1| ATP synthase subunit epsilon [Burkholderia dolosa AUO158]
          Length = 141

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSG 133
           V+    ++ + E   V +P   G++G+LPGH P I  ++PG + +  +G + +  FV+ G
Sbjct: 8   VVSAEEQIFSGEAKFVALPGEAGELGILPGHTPLITRIRPGAVRIEVEGGNDEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGKDLDSAKAEEARKRAEETLQNAKSDIDLAKAQ 118


>gi|148252016|ref|YP_001236601.1| F0F1 ATP synthase subunit epsilon [Bradyrhizobium sp. BTAi1]
 gi|166222434|sp|A5E951.1|ATPE_BRASB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|146404189|gb|ABQ32695.1| ATP synthase F1 subcomplex epsilon subunit [Bradyrhizobium sp.
           BTAi1]
          Length = 135

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V VP   G  GVL GH P +A L+PG+L+V  G   +K  V  G A I    +  I
Sbjct: 19  EVDQVDVPGQEGDFGVLAGHAPFVATLRPGILTVTAGGTQQKIIVLGGLAEISEKGLT-I 77

Query: 146 IAVEAVPIDQIDPS 159
           +A  A  + ++D +
Sbjct: 78  LADVATSLKELDQT 91


>gi|452821481|gb|EME28511.1| [pt] F-type H+-transporting ATPase subunit beta [Galdieria
           sulphuraria]
          Length = 599

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII-AV 148
           +I+P STGQ+G+L GH P ++ L  GV+ V   N+     +  GFA +  + +  ++   
Sbjct: 483 IILPTSTGQLGILSGHAPLLSALDIGVMRVRIKNNWTSIVLFGGFAEVENDEIIILVNGA 542

Query: 149 EAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           E   +  +D +   K L E +  L+ A T+ EK EA
Sbjct: 543 EEASVINLDKA--NKDLIESSSLLNEAKTNKEKIEA 576


>gi|425441140|ref|ZP_18821426.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9717]
 gi|425449332|ref|ZP_18829173.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 7941]
 gi|389718239|emb|CCH97783.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9717]
 gi|389764046|emb|CCI09551.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 7941]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P+STGQ+G+L GH P +  L  GV+ +  G D +   V  GFA +  N +  ++   
Sbjct: 22  VILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEIK-VLVNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQ 170
           A    +ID    +K  AE+ Q
Sbjct: 81  AELGSKIDK---EKARAEYEQ 98


>gi|443699808|gb|ELT99080.1| hypothetical protein CAPTEDRAFT_93916, partial [Capitella teleta]
          Length = 139

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 2/81 (2%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            E+   +V+M+I   S G +G+ PGH P + EL+PG +  V +G   + ++VS GF  + 
Sbjct: 12  QEIFKGQVEMLIATGSLGDLGITPGHTPLLTELRPGPIRLVTEGGGDEVFYVSGGFLEVQ 71

Query: 139 ANSVADIIAVEAVPIDQIDPS 159
            N +  I+A  A+  D ++ +
Sbjct: 72  PNQIK-ILADTALRADDMNEA 91


>gi|425444694|ref|ZP_18824740.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9443]
 gi|389735505|emb|CCI00999.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9443]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           VI+P+STGQ+G+L GH P +  L  GV+ +  G D +   V  GFA +  N +
Sbjct: 22  VILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEI 74


>gi|255261607|ref|ZP_05340949.1| ATP synthase F1, epsilon subunit [Thalassiobium sp. R2A62]
 gi|255103942|gb|EET46616.1| ATP synthase F1, epsilon subunit [Thalassiobium sp. R2A62]
          Length = 144

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ EV  V +P + G M  +P H P I  L+PGVL V     T +Y VS GFA + +  
Sbjct: 16  LASLEVTEVQIPGADGDMTAMPNHAPVITTLRPGVLRVVHAGGTDEYIVSGGFAEMSSEG 75

Query: 142 VADIIAVEAVPIDQI 156
           ++ ++A +A+P  ++
Sbjct: 76  LS-VLAEQALPRGEV 89


>gi|425469737|ref|ZP_18848649.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9701]
 gi|389880390|emb|CCI38856.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9701]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           VI+P+STGQ+G+L GH P +  L  GV+ +  G D +   V  GFA +  N +
Sbjct: 22  VILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEI 74


>gi|327399149|ref|YP_004340018.1| ATP synthase subunit epsilon [Hippea maritima DSM 10411]
 gi|327181778|gb|AEA33959.1| ATP synthase epsilon chain [Hippea maritima DSM 10411]
          Length = 132

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKKY 128
           L  + V P  S    K ++ +  P   G+ GVLPGH   +  L  G++ VH   ND K+Y
Sbjct: 3   LNCSIVTPSKSIFEGK-IEYISAPGQVGEFGVLPGHESFVTVLDVGIIDVHIADNDKKRY 61

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
            +  G+  I  +++  +IA + +  ++I+    ++ L E+  +LSS
Sbjct: 62  LIVGGYFEITEDNIV-VIADDVLSKEEINIEEAKEKLQEYKNELSS 106


>gi|443662990|ref|ZP_21133036.1| ATP synthase F1, epsilon subunit [Microcystis aeruginosa
           DIANCHI905]
 gi|159028801|emb|CAO89972.1| atpC [Microcystis aeruginosa PCC 7806]
 gi|443331994|gb|ELS46627.1| ATP synthase F1, epsilon subunit [Microcystis aeruginosa
           DIANCHI905]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           VI+P+STGQ+G+L GH P +  L  GV+ +  G D +   V  GFA +  N +
Sbjct: 22  VILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEI 74


>gi|166362834|ref|YP_001655107.1| F0F1 ATP synthase subunit epsilon [Microcystis aeruginosa NIES-843]
 gi|390440419|ref|ZP_10228748.1| ATP synthase epsilon chain [Microcystis sp. T1-4]
 gi|422302788|ref|ZP_16390147.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9806]
 gi|425437174|ref|ZP_18817599.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9432]
 gi|425462775|ref|ZP_18842242.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9808]
 gi|425466068|ref|ZP_18845371.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9809]
 gi|440753798|ref|ZP_20933000.1| ATP synthase F1, epsilon subunit [Microcystis aeruginosa TAIHU98]
 gi|226740267|sp|B0JFM8.1|ATPE_MICAN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166085207|dbj|BAF99914.1| ATP synthase F1 sector epsilon subunit [Microcystis aeruginosa
           NIES-843]
 gi|389677893|emb|CCH93211.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9432]
 gi|389787944|emb|CCI16800.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9806]
 gi|389824110|emb|CCI27205.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9808]
 gi|389831581|emb|CCI25556.1| ATP synthase epsilon chain [Microcystis aeruginosa PCC 9809]
 gi|389836161|emb|CCI32874.1| ATP synthase epsilon chain [Microcystis sp. T1-4]
 gi|440174004|gb|ELP53373.1| ATP synthase F1, epsilon subunit [Microcystis aeruginosa TAIHU98]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           VI+P+STGQ+G+L GH P +  L  GV+ +  G D +   V  GFA +  N +
Sbjct: 22  VILPSSTGQLGILSGHAPLLTALNIGVMRIRPGKDWENIAVLGGFAEVENNEI 74


>gi|209543480|ref|YP_002275709.1| ATP synthase F1 subunit epsilon [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531157|gb|ACI51094.1| ATP synthase F1, epsilon subunit [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 140

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ VDM ++P   G +  +P H P +  L+ GV+ +H DG  T ++FV+ GFA +   
Sbjct: 14  LFSRAVDMALIPGLEGDIAAMPDHAPMMLLLRGGVVELHQDGAVTDRFFVAGGFADMTET 73

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           S   I+A +A  +  +     Q  LAE  
Sbjct: 74  SCT-ILADQATALSDLSVEAAQARLAELE 101


>gi|162146521|ref|YP_001600980.1| ATP synthase epsilon chain [Gluconacetobacter diazotrophicus PAl 5]
 gi|189081366|sp|A9H9B1.1|ATPE_GLUDA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|161785096|emb|CAP54640.1| ATP synthase epsilon chain [Gluconacetobacter diazotrophicus PAl 5]
          Length = 141

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ VDM ++P   G +  +P H P +  L+ GV+ +H DG  T ++FV+ GFA +   
Sbjct: 15  LFSRAVDMALIPGLEGDIAAMPDHAPMMLLLRGGVVELHQDGAVTDRFFVAGGFADMTET 74

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFN 169
           S   I+A +A  +  +     Q  LAE  
Sbjct: 75  SCT-ILADQATALSDLSVEAAQARLAELE 102


>gi|319650866|ref|ZP_08005003.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 2_A_57_CT2]
 gi|317397464|gb|EFV78165.1| F0F1 ATP synthase subunit epsilon [Bacillus sp. 2_A_57_CT2]
          Length = 135

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++G+LPGH+P +A L+ G + + +G  T    VS GF  +    V  I
Sbjct: 19  DVEMVSTKAQSGELGILPGHIPMVAPLQIGAVRLKNGGKTDFVAVSGGFLEVRPEQVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSS---ATTDLEKAE 183
           +A  A   ++ID     +      Q+L+       D  +AE
Sbjct: 78  LAQSAEQAEEIDVERAVRAKQRAEQRLNEQKRENIDFRRAE 118


>gi|443322604|ref|ZP_21051623.1| ATP synthase, F1 epsilon subunit [Gloeocapsa sp. PCC 73106]
 gi|442787653|gb|ELR97367.1| ATP synthase, F1 epsilon subunit [Gloeocapsa sp. PCC 73106]
          Length = 138

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 15/99 (15%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V  VI+P++TGQ+G+LPGH P    L  GV+ +    + K   +  GFA +  N V   I
Sbjct: 19  VQEVILPSTTGQLGILPGHAPLTTALGSGVMRIRVDKEWKNIALMGGFALVEDNEVK--I 76

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            V A    Q+  S+           L +A  + E+AE Q
Sbjct: 77  LVNAA---QMGESI----------NLETARAEFEQAEKQ 102


>gi|728927|sp|P41171.1|ATPE_THIFE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|154675|gb|AAA53128.1| F1F0-ATPase epsilon subunit [Acidithiobacillus ferrooxidans]
          Length = 141

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           DMV+ P   G++G+LP H P +  L+PG L +  G +T+  FV+ G   I  + V  ++A
Sbjct: 22  DMVVAPGEMGELGILPRHAPLLTGLRPGELRIIHGAETEYLFVNGGILEIQPDMVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A     ID +           +++  T  +E A AQ
Sbjct: 81  DSAERATDIDEAKALAAKQAAEARMAGHTDQMEYAAAQ 118


>gi|404417791|ref|ZP_10999577.1| F0F1 ATP synthase subunit epsilon [Staphylococcus arlettae CVD059]
 gi|403489803|gb|EJY95362.1| F0F1 ATP synthase subunit epsilon [Staphylococcus arlettae CVD059]
          Length = 134

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 8/127 (6%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+N V P  +    +++++ ++  + G++GV+ GH+PT+A LK G + V+  + ++   
Sbjct: 4   LTLNIVTPNGAVYEREDIELAVLQTTAGEIGVMWGHIPTVAALKIGYVKVNFDSGSEYIA 63

Query: 130 VSSGFAFIHANSVADII--AVEAVPID----QIDPSLVQKGLA--EFNQKLSSATTDLEK 181
           VS GF  +  + ++ I+  A  A  ID    Q+  S  +  LA  + N  +  A   LE+
Sbjct: 64  VSEGFVEVRQHKLSVIVQTAERANEIDVARAQLAKSKAESHLANEDDNSDIYRAKRALER 123

Query: 182 AEAQIGV 188
           A  ++ V
Sbjct: 124 ANNRLRV 130


>gi|306817952|ref|ZP_07451690.1| phosphonate metabolism protein PhnK [Mobiluncus mulieris ATCC
           35239]
 gi|304649295|gb|EFM46582.1| phosphonate metabolism protein PhnK [Mobiluncus mulieris ATCC
           35239]
          Length = 105

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 41/73 (56%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGF 134
           V+  A  L   E   V+VP+  G +G+LPGH P +  L+PG + V     T++  V+SGF
Sbjct: 7   VVDRAHTLFQGEAHQVVVPSVNGDLGILPGHQPLLVVLRPGKVRVTSNGKTQELAVTSGF 66

Query: 135 AFIHANSVADIIA 147
           A +  N+V  ++ 
Sbjct: 67  ASVDNNTVTVVLG 79


>gi|313144967|ref|ZP_07807160.1| predicted protein [Helicobacter cinaedi CCUG 18818]
 gi|386761421|ref|YP_006235056.1| F0F1 ATP synthase subunit epsilon [Helicobacter cinaedi PAGU611]
 gi|313129998|gb|EFR47615.1| predicted protein [Helicobacter cinaedi CCUG 18818]
 gi|385146437|dbj|BAM11945.1| F0F1 ATP synthase subunit epsilon [Helicobacter cinaedi PAGU611]
 gi|396079172|dbj|BAM32548.1| F0F1 ATP synthase subunit epsilon [Helicobacter cinaedi ATCC
           BAA-847]
          Length = 130

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 3/110 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT++ V PY S +   EV  VI+P S G+ GV PGH   ++ LK GV+   +    ++  
Sbjct: 4   LTLSIVTPYGS-IYNGEVKYVIMPGSEGEFGVYPGHCNILSLLKVGVIEFENTQGNRELV 62

Query: 130 -VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
            ++ G+A + +  V  IIA  AV I     S +   L      L+ ATTD
Sbjct: 63  AINWGYAEVSSTDV-KIIADGAVAIGGSAESEIASALDNARTLLAEATTD 111


>gi|198284878|ref|YP_002221199.1| F0F1 ATP synthase subunit epsilon [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218666899|ref|YP_002427558.1| F0F1 ATP synthase subunit epsilon [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|416007058|ref|ZP_11561135.1| F0F1 ATP synthase subunit epsilon [Acidithiobacillus sp. GGI-221]
 gi|198249399|gb|ACH84992.1| ATP synthase F1, epsilon subunit [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218519112|gb|ACK79698.1| ATP synthase F1, epsilon subunit [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|339836442|gb|EGQ64036.1| F0F1 ATP synthase subunit epsilon [Acidithiobacillus sp. GGI-221]
          Length = 141

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           DMV+ P   G++G+LP H P +  L+PG L +  G +T+  FV+ G   I  + V  ++A
Sbjct: 22  DMVVAPGEMGELGILPRHAPLLTGLRPGELRIIHGAETEYLFVNGGILEIQPDMVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A     ID +           +++  T  +E A AQ
Sbjct: 81  DSAERATDIDEAKALAAKQAAEARMAGHTDQMEYAAAQ 118


>gi|456351998|dbj|BAM86443.1| F0F1 ATP synthase epsilon subunit [Agromonas oligotrophica S58]
          Length = 135

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V VP   G  GVL GH P +A L+PG+L+V  G   +K  V  G A I    +  +
Sbjct: 19  EVDQVDVPGQEGDFGVLAGHAPFVATLRPGILTVTSGGSQQKIIVLGGLAEISDKGLT-V 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
           +A  A  +  +D +     +A    KL+
Sbjct: 78  LADVATSLKDLDQTAFAAEIAGMETKLN 105


>gi|352105488|ref|ZP_08960803.1| F0F1 ATP synthase subunit epsilon [Halomonas sp. HAL1]
 gi|350598361|gb|EHA14481.1| F0F1 ATP synthase subunit epsilon [Halomonas sp. HAL1]
          Length = 142

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGND 124
           + +  T N V   AS  S   V+ VI     G +GVLPGH P + EL+PG V  ++DG  
Sbjct: 1   MANSFTCNIVSAEASIFSGT-VEQVIASGVMGDLGVLPGHAPLLTELQPGPVRVIYDGGA 59

Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLV----QKGLAEFNQKLS 173
            + ++V+ GF  +  + V  I+A  A     ++ +      Q+ L  FN K S
Sbjct: 60  EENFYVTGGFMEVQPD-VVTILADAASRASDLNEAAAEEARQQALKAFNDKSS 111


>gi|302341730|ref|YP_003806259.1| ATP synthase F1, subunit epsilon [Desulfarculus baarsii DSM 2075]
 gi|301638343|gb|ADK83665.1| ATP synthase F1, epsilon subunit [Desulfarculus baarsii DSM 2075]
          Length = 137

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + +K+ +  V P    LS KEV+ V+     G+ GVL GHVP +A L  G L   DG  T
Sbjct: 1   MANKILLEVVTPDKLLLS-KEVEAVVATGVDGEFGVLYGHVPFLATLDIGELRFRDGAHT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
               ++ GFA +  + V  ++A  A    +ID    Q+   +  Q+L+       K E  
Sbjct: 60  DYAAIAGGFAEVTGSKVT-VLAEAAELAREIDVDRAQRAREKAEQRLAKV-----KGEDM 113

Query: 186 IGVDVHSALNSAL 198
             + V +AL  A+
Sbjct: 114 EYIRVEAALKRAM 126


>gi|451814838|ref|YP_007451290.1| ATP synthase e subunit [Synechocystis sp. PCC 6803]
 gi|1653172|dbj|BAA18088.1| ATP synthase e subunit [Synechocystis sp. PCC 6803]
 gi|407958599|dbj|BAM51839.1| ATP synthase F0F1 subunit epsilon [Synechocystis sp. PCC 6803]
 gi|451780807|gb|AGF51776.1| ATP synthase e subunit [Synechocystis sp. PCC 6803]
          Length = 165

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 37/62 (59%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +EV  +I+P++TGQ+G+L  H P +  L+ GV+ V  G D +   V  GFA +  N V  
Sbjct: 46  EEVQELILPSTTGQLGILSNHAPLLTALEIGVMRVRPGKDWQNIAVMGGFAEVENNEVKV 105

Query: 145 II 146
           ++
Sbjct: 106 LV 107


>gi|220936459|ref|YP_002515358.1| F0F1 ATP synthase subunit epsilon [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
 gi|254809439|sp|B8GRB7.1|ATPE_THISH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|219997769|gb|ACL74371.1| F0F1 ATP synthase subunit epsilon [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
          Length = 141

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVADII 146
           MV+ PA  G++G+LP H   IA+LKPG + V   D  +    F+S G   +  + V  ++
Sbjct: 23  MVVAPAEGGEVGILPRHSQYIAQLKPGEVRVKVSDSGEEHSIFISGGLLEVQPH-VVTVL 81

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           A  AV    +D +  ++ +    + LS    D + A+AQ
Sbjct: 82  ADTAVRAKDLDEAEAKEAMRRAEEALSDRKADFDYAKAQ 120


>gi|228474926|ref|ZP_04059655.1| ATP synthase F1, epsilon subunit [Staphylococcus hominis SK119]
 gi|314935949|ref|ZP_07843299.1| ATP synthase F1, epsilon subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|418618931|ref|ZP_13181774.1| ATP synthase F1, epsilon subunit [Staphylococcus hominis VCU122]
 gi|228271158|gb|EEK12538.1| ATP synthase F1, epsilon subunit [Staphylococcus hominis SK119]
 gi|313655955|gb|EFS19697.1| ATP synthase F1, epsilon subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|374825792|gb|EHR89711.1| ATP synthase F1, epsilon subunit [Staphylococcus hominis VCU122]
          Length = 133

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + ++ V P  S     +V++V+   + G++G++ GH+PT+A LK G + V   N T+   
Sbjct: 4   VNLDIVTPNGSVYEKDDVELVVFQTTAGEIGIMSGHIPTVAALKIGHIKVKFKNGTEYIA 63

Query: 130 VSSGFAFIHANSVADII 146
           VS GF  I  + V+ I+
Sbjct: 64  VSGGFVEIRQHKVSVIV 80


>gi|372000157|gb|AEX65155.1| F0F1 ATP synthase epsilon chain [Blossfeldia liliputana]
          Length = 133

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P S+GQ+GVLP H P    +  G++ +   +      V+  FA I  N +  +
Sbjct: 18  EVKEIILPTSSGQIGVLPNHAPIATGVDIGIMRIRLNDQWLTIVVTGLFAIICNNEIT-V 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
              EA     IDP        E  Q L  A  +L KAE +I
Sbjct: 77  FVTEAERGSDIDPQ-------EAQQTLEKAEANLRKAEGKI 110


>gi|330815047|ref|YP_004358752.1| ATP synthase subunit epsilon [Burkholderia gladioli BSR3]
 gi|327367440|gb|AEA58796.1| ATP synthase subunit epsilon [Burkholderia gladioli BSR3]
          Length = 141

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSG 133
           V+    E+ + +   V +P  +G++G+LPGH P I  ++PG + +  +G   +  FV+ G
Sbjct: 8   VVSAEEEIFSGQAKFVALPGESGELGILPGHTPLITRIRPGAVRIESEGGQDEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGRDLDAAKAEEAKRRAEETLQNAKSDIDLAKAQ 118


>gi|428214113|ref|YP_007087257.1| ATP synthase F1 subunit epsilon [Oscillatoria acuminata PCC 6304]
 gi|428002494|gb|AFY83337.1| ATP synthase, F1 epsilon subunit [Oscillatoria acuminata PCC 6304]
          Length = 142

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 2/116 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +   + + + VI+P++TGQ+G+L  H P +  L  GV+ V    D     
Sbjct: 10  LTVRVISPDKTVWDS-QAEEVILPSTTGQLGILSEHAPLLTALDVGVMRVRADKDWVAIA 68

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  GFA +  N V  I+   A   D+I+    +K  +E   +L+S+TT   + + Q
Sbjct: 69  LMGGFAEVEQNEVT-ILVNGAEQGDKINLEEAKKAYSEAETRLNSSTTGSRQEQIQ 123


>gi|389776196|ref|ZP_10193784.1| F0F1 ATP synthase subunit epsilon [Rhodanobacter spathiphylli B39]
 gi|388436868|gb|EIL93705.1| F0F1 ATP synthase subunit epsilon [Rhodanobacter spathiphylli B39]
          Length = 141

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSG 133
           ++   +E+ + +  MV+     G++G+ P H P I  LKPG + V  DG + ++++VS G
Sbjct: 9   IVSAEAEIFSGDATMVVATGELGELGITPRHAPLITRLKPGHVDVLLDGGERQQFWVSGG 68

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +    V  ++A  A     +D +  Q+   E    L++ T  +E AEAQ
Sbjct: 69  ILEVQPQ-VVTVLADSAARAADLDEASAQRAKQEAETALANRTDAMEIAEAQ 119


>gi|428310961|ref|YP_007121938.1| ATP synthase F1 subunit epsilon [Microcoleus sp. PCC 7113]
 gi|428252573|gb|AFZ18532.1| ATP synthase, F1 epsilon subunit [Microcoleus sp. PCC 7113]
          Length = 136

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +   + E + VI+P++TGQ+G+L GH P +  L  GV+ V  G D     
Sbjct: 3   LTVRVISPDKTVWDS-EAEEVILPSTTGQLGILSGHAPLLTALDVGVMRVRPGKDWLPIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           +  GFA +  N V  I+   A   D ID ++  +   +  ++L+ 
Sbjct: 62  LMGGFAEVENNEVT-ILVNGAERGDAIDKAVALEAYTKAEERLNQ 105


>gi|114706548|ref|ZP_01439449.1| ATP synthase subunit epsilon [Fulvimarina pelagi HTCC2506]
 gi|114537940|gb|EAU41063.1| ATP synthase subunit epsilon [Fulvimarina pelagi HTCC2506]
          Length = 134

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L +++ + V+VP + G+  V+  H P +  LKPG+++    G + KK FV  GFA ++ N
Sbjct: 16  LLSEDANSVVVPGNEGEFTVMSNHAPFMTTLKPGMVTAKLSGGEEKKLFVRGGFADVNEN 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
            +  ++A  A P D +  S + + +    +++  A  D
Sbjct: 76  GLT-LLAEHAEPADNMTASQLDEHIEAARKRMDDAEHD 112


>gi|161344760|ref|NP_441408.2| ATP synthase F0F1 subunit epsilon [Synechocystis sp. PCC 6803]
 gi|383322422|ref|YP_005383275.1| ATP synthase subunit epsilon [Synechocystis sp. PCC 6803 substr.
           GT-I]
 gi|383325591|ref|YP_005386444.1| ATP synthase subunit epsilon [Synechocystis sp. PCC 6803 substr.
           PCC-P]
 gi|383491475|ref|YP_005409151.1| ATP synthase subunit epsilon [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|384436742|ref|YP_005651466.1| ATP synthase subunit epsilon [Synechocystis sp. PCC 6803]
 gi|114608|sp|P26533.3|ATPE_SYNY3 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|47517|emb|CAA41138.1| ATPase subunit epsilon [Synechocystis sp. PCC 6803]
 gi|339273774|dbj|BAK50261.1| ATP synthase epsilon subunit [Synechocystis sp. PCC 6803]
 gi|359271741|dbj|BAL29260.1| ATP synthase epsilon subunit [Synechocystis sp. PCC 6803 substr.
           GT-I]
 gi|359274911|dbj|BAL32429.1| ATP synthase epsilon subunit [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|359278081|dbj|BAL35598.1| ATP synthase epsilon subunit [Synechocystis sp. PCC 6803 substr.
           PCC-P]
          Length = 136

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           +EV  +I+P++TGQ+G+L  H P +  L+ GV+ V  G D +   V  GFA +  N V
Sbjct: 17  EEVQELILPSTTGQLGILSNHAPLLTALEIGVMRVRPGKDWQNIAVMGGFAEVENNEV 74


>gi|397688921|ref|YP_006526240.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri DSM 10701]
 gi|395810477|gb|AFN79882.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri DSM 10701]
          Length = 142

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MV+   + G +G+LPGH P +++LKPG V  +  G D + +++S GF  + 
Sbjct: 14  EELFSGLVEMVVAHGNLGDIGILPGHAPLLSDLKPGPVRVIKQGGDEEIFYISGGFIEVQ 73

Query: 139 ANSV 142
            N V
Sbjct: 74  PNMV 77


>gi|392423371|ref|YP_006459975.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri CCUG 29243]
 gi|431929417|ref|YP_007242451.1| ATP synthase F1 subunit epsilon [Pseudomonas stutzeri RCH2]
 gi|452750212|ref|ZP_21949964.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri NF13]
 gi|390985559|gb|AFM35552.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri CCUG 29243]
 gi|431827704|gb|AGA88821.1| ATP synthase, F1 epsilon subunit [Pseudomonas stutzeri RCH2]
 gi|452005862|gb|EMD98142.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri NF13]
          Length = 142

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MV+   + G +GVLPGH P + +LKPG V  +  G D + +++S GF  + 
Sbjct: 14  EELFSGLVEMVVAHGNLGDIGVLPGHAPLLTDLKPGPVRVIKQGGDEEIFYISGGFIEVQ 73

Query: 139 ANSV 142
            N V
Sbjct: 74  PNMV 77


>gi|352095876|ref|ZP_08956823.1| ATP synthase epsilon chain [Synechococcus sp. WH 8016]
 gi|351677232|gb|EHA60381.1| ATP synthase epsilon chain [Synechococcus sp. WH 8016]
          Length = 135

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           D VI+P++TGQ+G+LPGHV  +A L  GVL V   ++ +   +  GFA + ++ V  ++ 
Sbjct: 20  DEVILPSTTGQVGILPGHVSLLAALDVGVLRVRTDSNWQSIALMGGFAEVESDDVTVLVN 79

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              + ++ ID +  +         LS+A T + K E Q
Sbjct: 80  SAELGVN-IDSTSAES-------DLSAARTAVTKLEGQ 109


>gi|27375550|ref|NP_767079.1| ATP synthase F0F1 subunit epsilon [Bradyrhizobium japonicum USDA
           110]
 gi|60389778|sp|Q89X75.1|ATPE_BRAJA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|27348687|dbj|BAC45704.1| ATP synthase epsilon chain [Bradyrhizobium japonicum USDA 110]
          Length = 135

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V +P   G  GVL GH P +A ++PG+L+V      +K  V  G A +    +  +
Sbjct: 19  EVDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTVTTAGRHEKIIVLGGLAEVSEKGLT-V 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKL 172
           +A  A  +D++D +   + +AE  + L
Sbjct: 78  LADVATSLDELDRAQFAETIAEMEEGL 104


>gi|237747182|ref|ZP_04577662.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
 gi|229378533|gb|EEO28624.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
          Length = 140

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGV--LSVHDGNDTKKYFVSSGFAFI--HANS 141
           E + V++P   G++G+LP H P I  +KPG   + V D  D +  FV+ G   +  HA +
Sbjct: 20  EAEFVVLPGELGELGILPRHAPLITRIKPGAVRIKVSDKEDEEYVFVAGGVLEVQPHAVT 79

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDV 190
           V    A+ A  +D+   S  +K LAE       +  D  KA+A+I + V
Sbjct: 80  VLADTAIRAKDLDEAKASEAKK-LAEDAILNRESQIDYAKAQAEIAMAV 127


>gi|409990844|ref|ZP_11274167.1| F0F1 ATP synthase subunit epsilon [Arthrospira platensis str.
           Paraca]
 gi|291568723|dbj|BAI90995.1| ATP synthase epsilon chain [Arthrospira platensis NIES-39]
 gi|409938295|gb|EKN79636.1| F0F1 ATP synthase subunit epsilon [Arthrospira platensis str.
           Paraca]
          Length = 138

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 19/131 (14%)

Query: 70  LTVNFVLPYAS--ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           LTV  + P  +  + +A+EV   I+P++TGQ+G+L  H P +  L PGV+ V   N+   
Sbjct: 3   LTVRVIAPDQTVWDDTAQEV---ILPSTTGQLGILSDHAPLLTALDPGVMRVRAKNEWMS 59

Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             +  GFA +  N +  ++  A +   ID      V+K    FNQ    A   LE A A 
Sbjct: 60  IALMEGFAEVQNNEITVLVNGAEKGTNID------VEKAREAFNQ----AQAALETANA- 108

Query: 186 IGVDVHSALNS 196
            G +V   L +
Sbjct: 109 -GANVQEQLKA 118


>gi|88807397|ref|ZP_01122909.1| ATP synthase subunit epsilon [Synechococcus sp. WH 7805]
 gi|88788611|gb|EAR19766.1| ATP synthase subunit epsilon [Synechococcus sp. WH 7805]
          Length = 137

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LT+  + P  S       D VI+P++TGQ+G+LPGHV  +A +  GVL V      K   
Sbjct: 3   LTLRVLAPDQSVFDGS-ADEVILPSTTGQLGILPGHVSLLAAMDVGVLRVRAEGGWKSIA 61

Query: 130 VSSGFAFIHANSV 142
           +  GFA + A+ V
Sbjct: 62  LMGGFAEVDADDV 74


>gi|428297773|ref|YP_007136079.1| ATP synthase F1 subcomplex subunit epsilon [Calothrix sp. PCC 6303]
 gi|428234317|gb|AFZ00107.1| ATP synthase F1 subcomplex epsilon subunit [Calothrix sp. PCC 6303]
          Length = 137

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
           LTV  + P  +   A   + VI+P++TGQ+GVL GH P ++ L  GV+ V    G     
Sbjct: 3   LTVRVIAPDKTVWDAM-AEEVILPSTTGQLGVLTGHAPMLSALDTGVMRVRADKGQSWTA 61

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             +  GFA +  N V  I+   A   D I+    +   +E   +L    TD ++A+ Q
Sbjct: 62  IALMGGFAEVEENEVT-ILVNGAERGDNINLDEARSAYSEAQSRLDKVATDDKQAQIQ 118


>gi|421615439|ref|ZP_16056463.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri KOS6]
 gi|409782512|gb|EKN62067.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri KOS6]
          Length = 142

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MV+   + G +GVLPGH P + +LKPG V  +  G D + +++S GF  + 
Sbjct: 14  EELFSGLVEMVVAHGNLGDIGVLPGHAPLLTDLKPGPVRVIKQGGDEEIFYISGGFIEVQ 73

Query: 139 ANSV 142
            N V
Sbjct: 74  PNMV 77


>gi|409396515|ref|ZP_11247501.1| F0F1 ATP synthase subunit epsilon [Pseudomonas sp. Chol1]
 gi|419955879|ref|ZP_14471999.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri TS44]
 gi|387967299|gb|EIK51604.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri TS44]
 gi|409118996|gb|EKM95386.1| F0F1 ATP synthase subunit epsilon [Pseudomonas sp. Chol1]
          Length = 142

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MV+   + G +G+LPGH P + +LKPG V  +  G D + +++S GF  + 
Sbjct: 14  EELFSGLVEMVVAHGNLGDIGILPGHAPLLTDLKPGPVRVIKQGGDEEIFYISGGFIEVQ 73

Query: 139 ANSV 142
            N V
Sbjct: 74  PNMV 77


>gi|289066812|ref|YP_003434330.1| ATP synthase CF1 epsilon subunit [Vigna radiata]
 gi|393396090|ref|YP_006460329.1| ATP synthase CF1 epsilon subunit (chloroplast) [Vigna unguiculata]
 gi|259019999|gb|ACV90197.1| ATP synthase CF1 epsilon subunit [Vigna radiata]
 gi|349589845|gb|AEP94816.1| ATP synthase CF1 epsilon subunit [Vigna unguiculata]
 gi|387598454|gb|AFJ91846.1| ATP synthase CF1 epsilon subunit (chloroplast) [Vigna unguiculata]
          Length = 133

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P ++GQ+GVLP H P  + +  G+L +   +      +  GFA I+ N +  +
Sbjct: 18  EVKEIILPTNSGQIGVLPNHAPIASAVDIGILRIRLKDQWLTMALMGGFARINNNEIT-V 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  +A     IDP        E  Q L  A T+L KAE +
Sbjct: 77  LVNDAEKGSDIDPQ-------EAQQTLEIAETNLNKAEGK 109


>gi|108773049|ref|YP_635959.1| ATP synthase CF1 epsilon subunit [Acutodesmus obliquus]
 gi|122244023|sp|Q1KVW5.1|ATPE_SCEOB RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|88696615|gb|ABD48241.1| CF1 epsilon subunit of ATP synthase [Acutodesmus obliquus]
          Length = 136

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + + +I+P  TG+MGVL  H P I  L  G + V    +   Y +  GFA +  N V  I
Sbjct: 18  QAEEIILPTETGEMGVLKNHAPIITGLDVGAMLVRTKEEWNSYALMGGFAVVKKNKVT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +A EA   + ID         E       A  +LEKAE 
Sbjct: 77  LANEAESAETIDAE-------EAKNAFEIAKGNLEKAEG 108


>gi|345859327|ref|ZP_08811677.1| ATP synthase F1, epsilon subunit [Desulfosporosinus sp. OT]
 gi|344327474|gb|EGW38902.1| ATP synthase F1, epsilon subunit [Desulfosporosinus sp. OT]
          Length = 135

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           ++V+  ++P   G++G+LP H P IA +  GVL  +     K+  V+ GF  +  NS A 
Sbjct: 19  EDVEFAVIPGELGELGILPNHAPLIAGMDIGVLRYNLNGAVKRVAVAGGFVEVIENS-AI 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++A  A   + ID +  Q+      ++LS+ T +++   A+
Sbjct: 78  VLADTAELSEDIDVARAQEARERAKKRLSTRTNEIDVRRAE 118


>gi|220910364|ref|YP_002485675.1| ATP synthase F0F1 subunit epsilon [Cyanothece sp. PCC 7425]
 gi|254809359|sp|B8HP54.1|ATPE_CYAP4 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|219866975|gb|ACL47314.1| ATP synthase F1, epsilon subunit [Cyanothece sp. PCC 7425]
          Length = 138

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P++TGQ+G+L GH P +  L+ GV+ V  G +     +  GFA +  N V  I+   
Sbjct: 22  VILPSTTGQLGILSGHAPLLTALETGVMRVRSGKEWLPIALMGGFAEVENNEVT-ILVNA 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSA-TTDLEKAEAQ 185
           A   D+ID +  +   A    KLS A  +D  +A+ Q
Sbjct: 81  AERGDRIDRAQAEASYAAAQTKLSQAEQSDSRQAKIQ 117


>gi|410451833|ref|ZP_11305833.1| ATP synthase F1, epsilon subunit [Leptospira sp. Fiocruz LV3954]
 gi|410014338|gb|EKO76470.1| ATP synthase F1, epsilon subunit [Leptospira sp. Fiocruz LV3954]
          Length = 127

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  G+L +  G   K 
Sbjct: 4   NKLKVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVAVLGIGILEIRKGEKLKV 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEA 184
             +  GF  +  NS++ I+       + ID    +K L E  +KLS   S    L+K + 
Sbjct: 63  LSIEGGFIEVKENSIS-ILTDHGALKEDIDIEAERKVLVE-TEKLSPSDSKNLLLQKTKT 120

Query: 185 QI 186
           +I
Sbjct: 121 RI 122


>gi|117926731|ref|YP_867348.1| ATP synthase F1 subunit epsilon [Magnetococcus marinus MC-1]
 gi|189081367|sp|A0LD99.1|ATPE_MAGSM RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|117610487|gb|ABK45942.1| ATP synthase F1 subcomplex epsilon subunit [Magnetococcus marinus
           MC-1]
          Length = 137

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V +V VP S G  GVL GHVP I+ L+ GV+ +  G+D     VS GFA +  + V  ++
Sbjct: 21  VQLVTVPGSEGYFGVLSGHVPMISSLRSGVVRMGQGDDAVHLAVSKGFAEVRPDRVT-LL 79

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA-QIGVDVHSALNSALTG 200
              AV   ++D + V K       +L    T+ E+ E  +  +D  +A  +AL G
Sbjct: 80  VDRAVFGKKVDAAAVTKIRDAAQDELDGTPTESEEYETLRDKLDFANAQLAALEG 134


>gi|270267292|ref|YP_002000404.2| ATP synthase CF1 epsilon subunit [Oedogonium cardiacum]
          Length = 135

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E D +I+P +TG+MGVL  H P I  L  G + +        + +  GF  I  N V  +
Sbjct: 18  ESDEIILPTNTGEMGVLKNHAPIITGLDVGAMLIRTAQGWNSFAIMGGFGIIGQNRVILL 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +     P + IDP        E    L +A T+LE+A+ 
Sbjct: 78  VNEAEFP-ETIDPQ-------EAENVLLTAKTNLEQAQG 108


>gi|388568893|ref|ZP_10155302.1| F-ATPase subunit epsilon [Hydrogenophaga sp. PBC]
 gi|388263849|gb|EIK89430.1| F-ATPase subunit epsilon [Hydrogenophaga sp. PBC]
          Length = 138

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 2/114 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           E   V +P   G++G+LPGH+P I  +KPG + +   +  +++ FV+ G   +  N++  
Sbjct: 19  EAKFVALPGEAGELGILPGHIPLITRIKPGAVRIEKADGGEEFVFVAGGILEVQPNAIT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           +++  A+    +D +       +  + + +A TD++ A+A   + V +A  +AL
Sbjct: 78  VLSDTAIRGKDLDEAKASSARQQAEEAVKNAKTDIDLAKATSELAVMAAQIAAL 131


>gi|75674632|ref|YP_317053.1| ATP synthase F0F1 subunit epsilon [Nitrobacter winogradskyi Nb-255]
 gi|119367752|sp|Q3SVJ0.1|ATPE_NITWN RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|74419502|gb|ABA03701.1| ATP synthase F1 subcomplex epsilon subunit [Nitrobacter
           winogradskyi Nb-255]
          Length = 135

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V +P   G  GVL GH P +A ++PG+L+V  G   +K  V  G A +    +  +
Sbjct: 19  EVDQVDIPGVEGDFGVLAGHAPVVAAIRPGMLTVTAGGTQQKIIVLGGLAEVSEKGLT-V 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT-TDLEKA 182
           +A  A  I+++D +     +A    +L+    ++L+KA
Sbjct: 78  LADVATSIEELDRAQFADTIAGMEARLTDKEGSELDKA 115


>gi|194476694|ref|YP_002048873.1| ATP synthase subunit epsilon [Paulinella chromatophora]
 gi|171191701|gb|ACB42663.1| ATP synthase subunit epsilon [Paulinella chromatophora]
          Length = 135

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           EV  VI+P++TGQ+G+LPGHV  +A +  GV+ +          V  GFA + +N +
Sbjct: 18  EVSEVILPSTTGQLGILPGHVSLLAAIDVGVMRIRQNTTWSTIAVMGGFAEVESNEI 74


>gi|255020242|ref|ZP_05292311.1| ATP synthase epsilon chain [Acidithiobacillus caldus ATCC 51756]
 gi|340780778|ref|YP_004747385.1| ATP synthase subunit epsilon [Acidithiobacillus caldus SM-1]
 gi|254970384|gb|EET27877.1| ATP synthase epsilon chain [Acidithiobacillus caldus ATCC 51756]
 gi|340554931|gb|AEK56685.1| ATP synthase epsilon chain [Acidithiobacillus caldus SM-1]
          Length = 141

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           DMV+ P   G++G+LP H P +  L+PG L +  G++T+  FV+ G   I  + V  ++A
Sbjct: 22  DMVVAPGEMGELGILPMHAPLLTGLRPGELRIKHGDETEYLFVNGGILEIQPHLVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A     ID +  +        +LS     ++ A AQ
Sbjct: 81  DSAERATDIDEAKAKAAKEAAEARLSQQLDGMDYAAAQ 118


>gi|212640519|ref|YP_002317039.1| F0F1 ATP synthase subunit epsilon [Anoxybacillus flavithermus WK1]
 gi|226740220|sp|B7GMF2.1|ATPE_ANOFW RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|212561999|gb|ACJ35054.1| F0F1-type ATP synthase, epsilon subunit [Anoxybacillus flavithermus
           WK1]
          Length = 134

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++GVLPGH+P +A L+ G + +  GN T+   VS GF  +  + V  I
Sbjct: 19  DVEMVSAKAQSGELGVLPGHIPMVAPLEIGAVRLKKGNATELVAVSGGFLEVRPDRVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   + ID +  +       ++L +   D++   A++ +
Sbjct: 78  LAQAAERAEDIDVARAKAAKERAERRLQAKQEDIDHKRAELAL 120


>gi|222150024|ref|YP_002550981.1| F0F1 ATP synthase subunit epsilon [Agrobacterium vitis S4]
 gi|254809341|sp|B9JTR1.1|ATPE_AGRVS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|221737006|gb|ACM37969.1| ATP synthase C chain [Agrobacterium vitis S4]
          Length = 135

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 5/130 (3%)

Query: 73  NFVLPYAS---ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKY 128
           NF   + S    L +++V  V++PA+ G+M V+  H PT+  +KPGV++V      T KY
Sbjct: 4   NFNFEFVSPERLLISEKVSEVVIPATEGEMTVMAHHAPTMTVIKPGVVTVKFASGKTGKY 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
            +  GFA I    +  ++A  AVP+D++    + K +     +L        + + +  +
Sbjct: 64  VIFGGFADITPERLT-LLAESAVPVDELSRDTLMKRIELAKAELDDTENHEHRTKLEQFL 122

Query: 189 DVHSALNSAL 198
           +  + LN  L
Sbjct: 123 NAMTHLNGVL 132


>gi|417858155|ref|ZP_12503212.1| F0F1 ATP synthase subunit epsilon [Agrobacterium tumefaciens F2]
 gi|418297783|ref|ZP_12909623.1| F0F1 ATP synthase subunit epsilon [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|338824159|gb|EGP58126.1| F0F1 ATP synthase subunit epsilon [Agrobacterium tumefaciens F2]
 gi|355537153|gb|EHH06413.1| F0F1 ATP synthase subunit epsilon [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 136

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M VL  H PT+  +KPG+++V     +T KY V  GFA I   
Sbjct: 16  LVSETVTEVVIPATLGEMTVLANHAPTMTTIKPGLVTVKFASGETHKYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
               ++A  AV  D + P  +QK +            D  KAE + G   H  L
Sbjct: 76  GCT-LLAESAVSADDMSPDTLQKRI------------DAAKAEIEEGNHHHEHL 116


>gi|443326019|ref|ZP_21054688.1| ATP synthase, F1 epsilon subunit [Xenococcus sp. PCC 7305]
 gi|442794400|gb|ELS03818.1| ATP synthase, F1 epsilon subunit [Xenococcus sp. PCC 7305]
          Length = 138

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+ VI+P++TGQ+G+L  H P I  L+ GV+ V  G D K   +  GFA +  N+V  +
Sbjct: 18  QVEEVILPSTTGQLGILSNHAPLITALEIGVMRVRPGKDWKAISLMGGFAEVE-NNVIKV 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           +   A   + ID   ++   AEF     SA  +++ AE
Sbjct: 77  LVNGAEVGENID---LESARAEF----QSAKDNVDAAE 107


>gi|422348902|ref|ZP_16429794.1| ATP synthase F1, epsilon subunit [Sutterella wadsworthensis
           2_1_59BFAA]
 gi|404658954|gb|EKB31816.1| ATP synthase F1, epsilon subunit [Sutterella wadsworthensis
           2_1_59BFAA]
          Length = 139

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 3/99 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHANSVA 143
           + ++V +P  +G++G+LPGHVP I  ++PG + +H     + ++ FV+ G   +  + V 
Sbjct: 19  DAELVSLPGKSGELGILPGHVPLITLIRPGFVRIHLPGKKEVEQVFVAGGVLEVQPDLVT 78

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
            ++A  AV  + +D +   K L +   +  +AT ++E A
Sbjct: 79  -VLADTAVRSNDLDEAKAAKALEDARAQRQNATGEIEIA 116


>gi|294501859|ref|YP_003565559.1| ATP synthase F1 subunit epsilon [Bacillus megaterium QM B1551]
 gi|384044307|ref|YP_005492324.1| ATP synthase subunit epsilon [Bacillus megaterium WSH-002]
 gi|114593|sp|P12699.1|ATPE_BACMQ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|142562|gb|AAA82527.1| ATP synthase epsilon subunit [Bacillus megaterium]
 gi|294351796|gb|ADE72125.1| ATP synthase F1, epsilon subunit [Bacillus megaterium QM B1551]
 gi|345441998|gb|AEN87015.1| ATP synthase epsilon chain [Bacillus megaterium WSH-002]
          Length = 134

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV+MV   A +G++G+L GH+P +A L+ G + +   + T+   VS GF  +  + V  I
Sbjct: 19  EVEMVSTRAQSGELGILHGHIPMVAPLQIGAVRLKKASSTELVAVSGGFLEVRPDKVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   ++ID +  ++       +L S   D++   A+I +
Sbjct: 78  LAQAAETAEEIDVARAEEAKKRAEMRLDSKQDDVDVKRAEIAL 120


>gi|584814|sp|Q08808.1|ATPE_GALSU RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|2146719|pir||S70820 H+-transporting two-sector ATPase (EC 3.6.3.14) epsilon chain - red
           alga (Cyanidium caldarium) chloroplast
 gi|396526|emb|CAA47242.1| H(+)-transporting ATP synthase [Cyanidium caldarium]
          Length = 138

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII-AV 148
           VI+P STGQ+G+L GH P +  L  GV+ V   N      +  GFA +  + +  ++   
Sbjct: 22  VILPTSTGQLGILSGHAPLLTALDIGVMRVRITNTWTSIVLFGGFAEVENDEILILVNGA 81

Query: 149 EAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           E   +  +D +   K L E +  L+ A T+ EK EA
Sbjct: 82  EEASVINLDKA--NKELIESSSLLNEAKTNKEKFEA 115


>gi|422315729|ref|ZP_16397152.1| ATP synthase epsilon chain [Fusobacterium periodonticum D10]
 gi|404592054|gb|EKA93997.1| ATP synthase epsilon chain [Fusobacterium periodonticum D10]
          Length = 131

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G++P H P +AEL  G + +   +  ++  YF++ GF  I +N+ A IIA E  P
Sbjct: 25  SEGDIGIMPNHAPLVAELSAGKMEIESPSKDRRDVYFLTGGFLEI-SNNQATIIADEIFP 83

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           +D+I+    Q  L +  ++L     + EK + Q  + + SA+  A T
Sbjct: 84  LDEINIENEQLELEKLRKELELDLPEEEKQKIQKRIKISSAMIDAKT 130


>gi|262066568|ref|ZP_06026180.1| ATP synthase F1, epsilon subunit [Fusobacterium periodonticum ATCC
           33693]
 gi|340753803|ref|ZP_08690577.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 2_1_31]
 gi|358468048|ref|ZP_09177696.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. oral taxon 370
           str. F0437]
 gi|229423356|gb|EEO38403.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. 2_1_31]
 gi|291379703|gb|EFE87221.1| ATP synthase F1, epsilon subunit [Fusobacterium periodonticum ATCC
           33693]
 gi|357065879|gb|EHI76053.1| ATP synthase F1, epsilon subunit [Fusobacterium sp. oral taxon 370
           str. F0437]
          Length = 131

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 95  STGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVADIIAVEAVP 152
           S G +G++P H P +AEL  G + +   +  ++  YF++ GF  I +N+ A IIA E  P
Sbjct: 25  SEGDIGIMPNHAPLVAELSAGKMEIESPSKDRRDVYFLTGGFLEI-SNNQATIIADEIFP 83

Query: 153 IDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
           +D+I+    Q  L +  ++L    T+ EK + Q  + + SA+  A T
Sbjct: 84  LDEINIENEQLELEKLRKELELDLTEEEKQKIQKRIKISSAMIDAKT 130


>gi|163845374|ref|YP_001623029.1| F0F1 ATP synthase subunit epsilon [Brucella suis ATCC 23445]
 gi|189081357|sp|A9WWS1.1|ATPE_BRUSI RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|163676097|gb|ABY40207.1| ATP synthase F1, epsilon subunit [Brucella suis ATCC 23445]
          Length = 135

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P + G +  L GH P +  + PGV+SV   DG  T  Y V  GFA I  
Sbjct: 16  LLSAQVTEVVIPGNEGYLTALAGHSPLMTTIMPGVVSVKLADGK-TDSYVVFGGFADITP 74

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q  +    + L  A+++  + +A+I
Sbjct: 75  QGCT-VLAESATHVDDIDPADIQHRIDHARKVLEDASSNEHRTKAEI 120


>gi|295707207|ref|YP_003600282.1| ATP synthase F1 subunit epsilon [Bacillus megaterium DSM 319]
 gi|294804866|gb|ADF41932.1| ATP synthase F1, epsilon subunit [Bacillus megaterium DSM 319]
          Length = 134

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV+MV   A +G++G+L GH+P +A L+ G + +   + T+   VS GF  +  + V  I
Sbjct: 19  EVEMVSTRAQSGELGILHGHIPMVAPLQIGAVRLKKASSTELVAVSGGFLEVRPDKVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   ++ID +  ++       +L S   D++   A+I +
Sbjct: 78  LAQAAETAEEIDIARAEEAKKRAEMRLDSKQDDVDVKRAEIAL 120


>gi|17549031|ref|NP_522371.1| ATP synthase F0F1 subunit epsilon [Ralstonia solanacearum GMI1000]
 gi|20137358|sp|Q8XRM1.1|ATPE2_RALSO RecName: Full=ATP synthase epsilon chain 2; AltName: Full=ATP
           synthase F1 sector epsilon subunit 2; AltName:
           Full=F-ATPase epsilon subunit 2
 gi|17431282|emb|CAD17961.1| probable atp synthase epsilon chain 2 (atp synthase f1
           sectorepsilon subunit 2) protein [Ralstonia solanacearum
           GMI1000]
          Length = 139

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHANSV---AD 144
            V+VP + G++G+LPGH P +  L+PG + V   ND +   FV+ GFA I    V   AD
Sbjct: 22  FVVVPGTEGELGILPGHEPLLTRLRPGTVRVTLENDDEVILFVAGGFAHILPQEVILLAD 81

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
             AV A  +D+      +K   E  Q  S +  D  +A+A++
Sbjct: 82  -TAVRARDLDEAKAQQARKAAEELLQN-SRSKIDYARAQAEL 121


>gi|67924175|ref|ZP_00517618.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Crocosphaera watsonii WH 8501]
 gi|416389879|ref|ZP_11685409.1| ATP synthase epsilon chain [Crocosphaera watsonii WH 0003]
 gi|67853991|gb|EAM49307.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Crocosphaera watsonii WH 8501]
 gi|357264163|gb|EHJ13087.1| ATP synthase epsilon chain [Crocosphaera watsonii WH 0003]
          Length = 136

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +     +V+ +I+P+++GQ+G+L GH P +  L  GV+ V    D K   
Sbjct: 3   LTVRVITPDKTVWDG-DVEEIILPSTSGQLGILGGHAPLLTALDTGVIRVRPDKDWKSIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
           V  GFA +  + +  ++   A   D ID    +   +    +L  A    E +E
Sbjct: 62  VMGGFAEVEQDEIK-VLVNSAEAGDDIDKETAKADYSAAQSRLEEANKTGEASE 114


>gi|431930556|ref|YP_007243602.1| ATP synthase F1 subunit epsilon [Thioflavicoccus mobilis 8321]
 gi|431828859|gb|AGA89972.1| ATP synthase, F1 epsilon subunit [Thioflavicoccus mobilis 8321]
          Length = 141

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIA 147
           MV  P   G++G+ P H P I  LKPG + V HDG   + ++VS G   +  + V  ++A
Sbjct: 23  MVYAPGEMGELGIAPRHTPLITRLKPGDVRVEHDGGQMEHFYVSGGMLEVQPD-VITVLA 81

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+    +D +   +        L+  + +LE A+AQ
Sbjct: 82  DTALRAHDLDEAAALEAKRRAEDALAGQSAELEYAKAQ 119


>gi|335357019|ref|ZP_08548889.1| ATP synthase epsilon chain [Lactobacillus animalis KCTC 3501]
          Length = 139

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTVN V P  S +     D+VI   + GQ+G++P  +P +A L    + V  G DT    
Sbjct: 7   LTVNVVTPDGS-VYENTTDLVICTTTVGQVGIMPNRLPLLASLAIDKIRVKTGEDTFDEV 65

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG-V 188
             SG     +N+V  ++A  A   ++ID S  ++       +++ A  + +  E Q   V
Sbjct: 66  AVSGGFIEFSNNVLSVVASAAERKEEIDTSRAERARKRAEARIAKAKENHDDNELQRAEV 125

Query: 189 DVHSALN 195
            +  A+N
Sbjct: 126 SLRRAIN 132


>gi|372000165|gb|AEX65159.1| F0F1 ATP synthase epsilon chain [Portulacaria afra]
          Length = 126

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 11/116 (9%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P ++GQ+GVLP H P    +  G+L +   +      +  GFA I  N +  +
Sbjct: 18  EVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGKNEIT-V 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA--QIGVDVHSALNSALT 199
           +  EA     IDP        E  Q L  A  +L KAE   QI ++ + AL  A T
Sbjct: 77  LVNEAERGSDIDPQ-------EAQQTLEKAEANLRKAEGKRQI-IEANLALRRAKT 124


>gi|329768921|ref|ZP_08260348.1| ATP synthase F1 [Gemella sanguinis M325]
 gi|328836638|gb|EGF86296.1| ATP synthase F1 [Gemella sanguinis M325]
          Length = 134

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 16/135 (11%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
           L V+ V P      A+E  MV++  ++GQ+G++  HVP +A LK G L V   DG + + 
Sbjct: 4   LNVSIVTPNGEAYRAEEASMVVLGTTSGQVGIMANHVPMVASLKIGPLKVVFPDGKE-EI 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
             VS GF   H + +  I+    +  D ID    ++      +++         AE Q G
Sbjct: 63  LAVSEGFVETHKDKITVIVQTAELDKD-IDVERAKRAKDRAEKRI---------AENQEG 112

Query: 188 VDVHS---ALNSALT 199
           +DV     AL  ALT
Sbjct: 113 LDVRRAQLALAKALT 127


>gi|410684681|ref|YP_006060688.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Ralstonia solanacearum CMR15]
 gi|299069170|emb|CBJ40425.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Ralstonia solanacearum CMR15]
          Length = 139

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHANSV---AD 144
            V+VP + G++G+LPGH P +  L+PG + V   ND +   FV+ GFA I    V   AD
Sbjct: 22  FVVVPGTEGELGILPGHEPLLTRLRPGTVRVTLENDDEIILFVAGGFAHILPQEVILLAD 81

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
             AV A  +D+      +K   E  Q  S +  D  +A+A++
Sbjct: 82  -TAVRARDLDEAKAQQARKAAEELLQN-SRSKIDYARAQAEL 121


>gi|398821695|ref|ZP_10580129.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. YR681]
 gi|398227649|gb|EJN13837.1| ATP synthase, F1 epsilon subunit [Bradyrhizobium sp. YR681]
          Length = 135

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V +P   G  GVL GH P +A ++PG+L++  G   +K  V  G A +    +  +
Sbjct: 19  EVDQVDIPGVEGDFGVLAGHAPVVAAIRPGILTITTGGKHEKVIVLGGLAEVSDKGLT-V 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD-LEKAEAQI 186
           +A  A  + ++D +   + +AE  + L     D L++A A++
Sbjct: 78  LADVATSMAELDKAKFAETVAEMEEGLKEHEGDELDQAIARL 119


>gi|11465582|ref|NP_045026.1| ATP synthase CF1 epsilon subunit [Cyanidium caldarium]
 gi|14547923|sp|Q9TM40.1|ATPE_CYACA RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|6466438|gb|AAF13019.1|AF022186_193 unknown [Cyanidium caldarium]
          Length = 133

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 8/100 (8%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           K V+ +I+P+STGQ+G+L  H P +  L  GV+     N      +  GFA I  N++  
Sbjct: 17  KTVEEIILPSSTGQLGILMNHAPLLTALDIGVMRARMVNTWVPLVLLGGFAQID-NNLVT 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           II  +A  +  ID         E N+ L+++  ++EKA++
Sbjct: 76  IIVSDAEEVKAIDEE-------EANKLLAASLANMEKAQS 108


>gi|317495893|ref|ZP_07954256.1| ATP synthase F1 [Gemella morbillorum M424]
 gi|316914070|gb|EFV35553.1| ATP synthase F1 [Gemella morbillorum M424]
          Length = 134

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
           L V+ V P     SA+   MV++  + GQ+G++  HVP +A LK G L V   DG + + 
Sbjct: 4   LDVSIVTPNGEAYSAENASMVVLDTTGGQLGIMANHVPMVASLKIGPLKVVFPDGRE-ES 62

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
             +S GF   H + +  I+    +  D ID    ++      ++L      L+   AQ+ 
Sbjct: 63  LAISKGFVETHKDKITVIVQTAELDKD-IDVERAKRAKQRAEERLQKKEDSLDVRRAQLA 121

Query: 188 V 188
           +
Sbjct: 122 L 122


>gi|449666409|ref|XP_002161905.2| PREDICTED: ATP synthase subunit delta, mitochondrial-like [Hydra
           magnipapillata]
          Length = 78

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 43/71 (60%)

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           VSSG   ++ +S A I+A EA P+D+ D + V+K   +    LS A T+  KAEAQI VD
Sbjct: 7   VSSGTITVNKDSTAQILAEEASPLDRFDLNSVRKAAEDARSALSVANTETLKAEAQIQVD 66

Query: 190 VHSALNSALTG 200
            + AL  AL G
Sbjct: 67  TYDALLFALDG 77


>gi|443474045|ref|ZP_21064066.1| ATP synthase epsilon chain [Pseudomonas pseudoalcaligenes KF707]
 gi|442904980|gb|ELS29895.1| ATP synthase epsilon chain [Pseudomonas pseudoalcaligenes KF707]
          Length = 141

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 15/103 (14%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
           +E+ +  V+MVI   + G +G+ PGH P I +LKPG +  V  G + + Y++S GF  + 
Sbjct: 14  AEIFSGLVEMVIAHGNLGDLGIAPGHAPLITDLKPGPIRLVKQGGEEEVYYISGGFLEVQ 73

Query: 139 ANSV---ADIIAVEAVPIDQ---------IDPSLVQKGLAEFN 169
            N V   AD + + A  +D+          + +L QKG AEF+
Sbjct: 74  PNMVKVLADTV-LRASDLDEAAAQESLKAAEKALHQKG-AEFD 114


>gi|427406531|ref|ZP_18896736.1| ATP synthase F1, epsilon subunit [Selenomonas sp. F0473]
 gi|425707961|gb|EKU71002.1| ATP synthase F1, epsilon subunit [Selenomonas sp. F0473]
          Length = 145

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSV 142
           A ++DM+I  ++ G++G+LP H+P +  L+P  + +H DG   + + V+ GF  +    +
Sbjct: 17  AADIDMLIARSTGGEIGILPKHIPLVTGLQPHAMRIHVDGGTEQLFAVAGGFMEVTPEKI 76

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
             ++A  A   D+ID +  Q+      ++L 
Sbjct: 77  T-VLATAAEEPDEIDINRAQRAYDRAQERLK 106


>gi|344201251|ref|YP_004785577.1| ATP synthase subunit epsilon [Acidithiobacillus ferrivorans SS3]
 gi|343776695|gb|AEM49251.1| ATP synthase epsilon chain [Acidithiobacillus ferrivorans SS3]
          Length = 141

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           DMV+ P   G++G+LP H P +  L+PG L +  G +T+  FV+ G   I  + V  ++A
Sbjct: 22  DMVVAPGEMGELGILPRHAPLLTGLRPGELRIIHGTETEYLFVNGGVLEIQPHLVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A     ID +           +++  T  +E A AQ
Sbjct: 81  DSAERATDIDEAKAMAAKQAAEARMAGQTDHMEFAAAQ 118


>gi|256827612|ref|YP_003151571.1| ATP synthase, F1 epsilon subunit [Cryptobacterium curtum DSM 15641]
 gi|256583755|gb|ACU94889.1| ATP synthase, F1 epsilon subunit [Cryptobacterium curtum DSM 15641]
          Length = 133

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-- 125
           S LT + V P A +L  +E  MV+VP   G+MG LPGH   ++ L  GV+ V     T  
Sbjct: 2   STLTCDIVTP-AKKLFTEECYMVVVPGKEGEMGFLPGHAQLMSTLADGVVRVLSDASTVA 60

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             Y +  G+  +    V  I+A  A  ++ I+   VQ  +A+   ++ + + +  +   +
Sbjct: 61  HTYALQGGYVQVTGEKVI-ILADRAQSVEDINLDEVQTRIADLTSRIEAESDEAHRDLLE 119

Query: 186 IGVDVHSALNSA 197
           + +  +  L  A
Sbjct: 120 VDLGWYRVLEHA 131


>gi|317121019|ref|YP_004101022.1| ATP synthase F1 subcomplex subunit epsilon [Thermaerobacter
           marianensis DSM 12885]
 gi|315590999|gb|ADU50295.1| ATP synthase F1 subcomplex epsilon subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 140

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +EVD +IVP + G +GVLP H P +A LK G+L+     + ++  V+ GF F  A++ A 
Sbjct: 20  EEVDSLIVPGAEGLLGVLPDHAPMVAALKIGILTYRKNGEKRRVAVAGGF-FEVADNHAV 78

Query: 145 IIAVEAVPIDQID 157
           +++  A   ++ID
Sbjct: 79  VLSDAAERAEEID 91


>gi|83952826|ref|ZP_00961556.1| ATP synthase F1, epsilon subunit [Roseovarius nubinhibens ISM]
 gi|83835961|gb|EAP75260.1| ATP synthase F1, epsilon subunit [Roseovarius nubinhibens ISM]
          Length = 148

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 2/116 (1%)

Query: 60  PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
           P+    +   +  + V P    L++ +V  V +P + G M V+  H P I  L+PGVL  
Sbjct: 2   PKAEAKMAETVQFDLVSPE-RRLASVQVTEVQIPGADGDMTVMADHAPLITSLRPGVLRA 60

Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
              +   +Y V+ GFA I+A+ ++ ++A  AVP   +     +  + +  QKL  A
Sbjct: 61  SGPDGESEYVVTGGFAEINADGIS-VLAERAVPRGDMTQDSFKALVDDAKQKLDRA 115


>gi|16127675|ref|NP_422239.1| ATP synthase F0F1 subunit epsilon [Caulobacter crescentus CB15]
 gi|221236494|ref|YP_002518931.1| F0F1 ATP synthase subunit epsilon [Caulobacter crescentus NA1000]
 gi|20137446|sp|Q9A2W1.1|ATPE_CAUCR RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|13425163|gb|AAK25407.1| ATP synthase F1, epsilon subunit [Caulobacter crescentus CB15]
 gi|220965667|gb|ACL97023.1| ATP synthase epsilon chain [Caulobacter crescentus NA1000]
          Length = 86

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL  + V P   EL + EVDMV  P + G  GVL  H P +  L+ G ++V DG  TK 
Sbjct: 2   AKLHFSLVAP-ERELFSGEVDMVQAPGAEGDFGVLANHAPFMTTLREGKVTVKDGATTKV 60

Query: 128 YFVSSGFA 135
           + +  GFA
Sbjct: 61  FDIQGGFA 68


>gi|303232585|ref|ZP_07319271.1| ATP synthase F1, epsilon subunit [Atopobium vaginae PB189-T1-4]
 gi|302481372|gb|EFL44446.1| ATP synthase F1, epsilon subunit [Atopobium vaginae PB189-T1-4]
          Length = 145

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH----DGN 123
           ++L+  FV P    +    V  +I+    G++GV PGH   I  L  G++ +H    DG 
Sbjct: 2   AQLSCQFVRP-DKLIYNGYVASLILATQDGELGVWPGHASAIVSLGDGIVRLHHLEDDGG 60

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           +T K  VS G+A I+ N V  I+A  A  +D I+  +V +   E   KL+ 
Sbjct: 61  ETDKVVVSGGYAEINPNGVI-ILASHARLVDDIERDVVLETRQEAFDKLNE 110


>gi|182677216|ref|YP_001831362.1| F0F1 ATP synthase subunit epsilon [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633099|gb|ACB93873.1| ATP synthase F1, epsilon subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 134

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK--YFVSSGFAFIHANSVA 143
           E D V+VP   G+  VL GH P +  L+PG+++V+D    +K  ++   GF  +    + 
Sbjct: 19  EADSVVVPGVEGEFTVLAGHAPFMTTLRPGLITVNDATSKEKLEFYTLGGFVDVGEGGLT 78

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
            I+A  A+PI + D        A F   L+ A TD+  A
Sbjct: 79  -ILADVALPIAEADQ-------ARFTADLAQAETDIHDA 109


>gi|403049251|ref|ZP_10903735.1| ATP synthase F1 subunit epsilon [SAR86 cluster bacterium SAR86D]
 gi|403049580|ref|ZP_10904064.1| ATP synthase F1 subunit epsilon [SAR86 cluster bacterium SAR86D]
          Length = 116

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAV 148
           MV    + G++G+ PGH P +  L  G + V +G++ + +F S GF  +  + V  +++ 
Sbjct: 1   MVYATGTLGELGIAPGHTPLLTGLAAGPVRVQNGSEEEAFFCSGGFLEVQPDLVT-VLSD 59

Query: 149 EAVPIDQIDPSLVQKGLAEFNQKLSS--ATTDLEKAEAQI 186
            A   D +D S   K      Q+L++  AT D  KA AQ+
Sbjct: 60  TAERADSLDESEAIKAKEAAEQELANKDATLDYAKASAQL 99


>gi|408376412|ref|ZP_11174017.1| F0F1 ATP synthase subunit epsilon [Agrobacterium albertimagni
           AOL15]
 gi|407749879|gb|EKF61390.1| F0F1 ATP synthase subunit epsilon [Agrobacterium albertimagni
           AOL15]
          Length = 135

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 73  NFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFV 130
           NF L     L   E V  V++PA+ G+M V+  H PT+  +KPGV++V        KY V
Sbjct: 6   NFELVSPERLLLSELVSEVVIPATEGEMTVMANHAPTMTTIKPGVVTVKLASGQVTKYVV 65

Query: 131 SSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT-----TDLEKAEAQ 185
             GFA +       ++A  AVP+ +I P  + K + E  ++L         T LE+  A+
Sbjct: 66  FGGFADVLPTG-CTLLAESAVPLAEIAPDTLTKRIDEARKELEGVEHHEHRTKLEQYLAE 124

Query: 186 I 186
           +
Sbjct: 125 L 125


>gi|288554384|ref|YP_003426319.1| ATP synthase subunit epsilon [Bacillus pseudofirmus OF4]
 gi|14916963|sp|P22480.2|ATPE_BACPE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|12061047|gb|AAG48364.1|AF330160_11 ATP synthase epsilon subunit [Bacillus pseudofirmus OF4]
 gi|288545544|gb|ADC49427.1| ATP synthase epsilon subunit [Bacillus pseudofirmus OF4]
          Length = 133

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S + VN V P        +VDMV+V    G++G+LP H+P +A L  G + +  GN  ++
Sbjct: 2   STIRVNVVTPDGKVYDG-DVDMVVVRTVEGELGILPKHIPLVAPLTVGAVRLKKGNSEEQ 60

Query: 128 YFVSSGFAFIHANSV 142
             VS GF  +  + V
Sbjct: 61  VAVSGGFVEVRPDQV 75


>gi|156618962|gb|ABU88158.1| ATP synthase CF1 epsilon subunit [Oedogonium cardiacum]
 gi|186968884|gb|ACC97207.1| CF1 epsilon subunit of ATP synthase [Oedogonium cardiacum]
          Length = 159

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           E D +I+P +TG+MGVL  H P I  L  G + +        + +  GF  I  N V  +
Sbjct: 42  ESDEIILPTNTGEMGVLKNHAPIITGLDVGAMLIRTAQGWNSFAIMGGFGIIGQNRVILL 101

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +     P + IDP        E    L +A T+LE+A+ 
Sbjct: 102 VNEAEFP-ETIDPQ-------EAENVLLTAKTNLEQAQG 132


>gi|372000159|gb|AEX65156.1| F0F1 ATP synthase epsilon chain [Didierea madagascariensis]
          Length = 133

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P ++GQ+GVLP H P    +  G+L +   +      +  GFA I  N +  +
Sbjct: 18  EVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEIT-V 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  EA     IDP        E  Q L  A  +L KAE +
Sbjct: 77  LVNEAERGSDIDPQ-------EAQQTLEKAEANLRKAEGK 109


>gi|373855365|ref|ZP_09598111.1| ATP synthase F1, epsilon subunit [Bacillus sp. 1NLA3E]
 gi|372454434|gb|EHP27899.1| ATP synthase F1, epsilon subunit [Bacillus sp. 1NLA3E]
          Length = 135

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V+MV   A  G++G+LPGH+P +A L+   L + +G +T+   ++ GF  +  + V  I+
Sbjct: 20  VEMVSTKARGGELGILPGHIPMVAPLEIAALRLKNGGNTEFVSINGGFLEVRPDQVT-IL 78

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKL---SSATTDLEKAE 183
           A  A   + ID     +      Q+L      T D  +AE
Sbjct: 79  AQSAEKAEDIDVERALRAKERAEQRLREQKQETMDFRRAE 118


>gi|448239635|ref|YP_007403693.1| ATP synthase component F1 subunit epsilon [Geobacillus sp. GHH01]
 gi|445208477|gb|AGE23942.1| ATP synthase component F1 subunit epsilon [Geobacillus sp. GHH01]
          Length = 133

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV V A +G++G+LPGH+P +A L+     +  G  T+   VS GF  +  ++V  I
Sbjct: 19  DVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGKTQYIAVSGGFLEVRPDNVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   + ID    +       ++L S   D++   A++ +
Sbjct: 78  LAQAAERAEDIDVLRAKAAKERAERRLQSQQDDIDFKRAELAL 120


>gi|295687684|ref|YP_003591377.1| ATPase F1 complex delta/epsilon subunit-like protein [Caulobacter
           segnis ATCC 21756]
 gi|295429587|gb|ADG08759.1| ATPase, F1 complex, delta/epsilon subunit-like protein [Caulobacter
           segnis ATCC 21756]
          Length = 86

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL  + V P   EL + EVDMV  P + G  GVL  H P +  L+ G ++V DG  TK 
Sbjct: 2   AKLHFSLVAP-ERELFSGEVDMVQAPGAEGDFGVLANHAPFMTTLREGKVTVKDGATTKV 60

Query: 128 YFVSSGFA 135
           + +  GFA
Sbjct: 61  FDIQGGFA 68


>gi|359686244|ref|ZP_09256245.1| F0F1 ATP synthase subunit epsilon [Leptospira santarosai str.
           2000030832]
 gi|418744379|ref|ZP_13300735.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           CBC379]
 gi|418752013|ref|ZP_13308285.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           MOR084]
 gi|421111037|ref|ZP_15571518.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str. JET]
 gi|422005746|ref|ZP_16352915.1| F0F1 ATP synthase subunit epsilon [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|409967742|gb|EKO35567.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           MOR084]
 gi|410794830|gb|EKR92730.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str.
           CBC379]
 gi|410803470|gb|EKS09607.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str. JET]
 gi|417255586|gb|EKT85054.1| F0F1 ATP synthase subunit epsilon [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|456874122|gb|EMF89442.1| ATP synthase F1, epsilon subunit [Leptospira santarosai str. ST188]
          Length = 127

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL V+ + P    L   EVD ++VP S G  G+LP H P +A L  G+L +  G   K 
Sbjct: 4   NKLKVSVISPEKI-LYKGEVDSLVVPGSEGFFGILPNHAPLVAVLGIGILEIRKGEKLKV 62

Query: 128 YFVSSGFAFIHANSVA 143
             +  GF  +  NS++
Sbjct: 63  LSIEGGFIEVKENSIS 78


>gi|224179402|ref|YP_002600813.1| CF1 epsilon subunit of ATP synthase [Pycnococcus provasolii]
 gi|217314445|gb|ACK36787.1| CF1 epsilon subunit of ATP synthase [Pycnococcus provasolii]
          Length = 132

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           ++  I+P +TGQMGVL GH P +  L  GV+        +   +  GF  +  + +  ++
Sbjct: 19  IEQAILPTTTGQMGVLQGHTPLVTALDIGVMMARTTTGWEAVVLMGGFGLVKDDRIT-LL 77

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
             EA     ++P        E    L+ ATT  E+ EA +      A   A+T
Sbjct: 78  VNEAELGSSVEPEQATTDFEEAKTTLADATTRKERVEANLAFKRARARYQAVT 130


>gi|421589514|ref|ZP_16034646.1| F0F1 ATP synthase subunit epsilon [Rhizobium sp. Pop5]
 gi|403705524|gb|EJZ21088.1| F0F1 ATP synthase subunit epsilon [Rhizobium sp. Pop5]
          Length = 135

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 9/100 (9%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M V+  H PT+  +KPG++SV   + +K+ Y V  GFA I   
Sbjct: 16  LLSEMVTEVVIPATEGEMTVMAHHAPTMTTIKPGLVSVRSSSGSKQDYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
               ++A  AVP+++++         E  +++ +A  +LE
Sbjct: 76  GCT-LLAESAVPVEELNKD-------ELTRRIEAAKRELE 107


>gi|92116486|ref|YP_576215.1| F0F1 ATP synthase subunit epsilon [Nitrobacter hamburgensis X14]
 gi|119361403|sp|Q1QPU2.1|ATPE2_NITHX RecName: Full=ATP synthase epsilon chain 2; AltName: Full=ATP
           synthase F1 sector epsilon subunit 2; AltName:
           Full=F-ATPase epsilon subunit 2
 gi|91799380|gb|ABE61755.1| ATP synthase F1 subcomplex epsilon subunit [Nitrobacter
           hamburgensis X14]
          Length = 136

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           ++  V+ V P  S L + +VD V +P   G +GVL GH P +  L+PG+++   G+   +
Sbjct: 2   TRFQVSLVSP-ESLLFSGQVDQVDLPGIEGDLGVLAGHAPIVVMLRPGIVTTVAGDIRDR 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS--SATTDLEKAEAQ 185
           + +  G A      +  I+A  A  +D  D + ++  + E  + L+  S   +L++A A+
Sbjct: 61  FVILGGLAEFSQGELT-ILADSASSVDGFDLTRLKAQIDEMQESLAKQSVGDELDRAVAK 119

Query: 186 IGVDVHSALNSAL 198
              D   A+++AL
Sbjct: 120 F--DHFKAIHTAL 130


>gi|126656479|ref|ZP_01727740.1| F0F1 ATP synthase subunit epsilon [Cyanothece sp. CCY0110]
 gi|126622165|gb|EAZ92872.1| F0F1 ATP synthase subunit epsilon [Cyanothece sp. CCY0110]
          Length = 136

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +     +V  +I+P+++GQ+G+L GH P +  L  GV+ V    D K   
Sbjct: 3   LTVRVITPDKTVWDG-DVQEIILPSTSGQLGILSGHAPLLTALDTGVIRVRPDKDWKSIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
           V  GFA +  + +  ++   A   D ID    ++   E+N    +A + LE+A
Sbjct: 62  VMGGFAEVEQDEIK-VLVNSAEAGDNIDKDAAKE---EYN----AAQSRLEEA 106


>gi|254456387|ref|ZP_05069816.1| ATP synthase F1, epsilon subunit [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083389|gb|EDZ60815.1| ATP synthase F1, epsilon subunit [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 130

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 2/131 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  +  V  V P  S L  ++V  V+VPA  G+MG+L  H+  I+ LKPG++ +   +  
Sbjct: 1   MSEEFKVEIVNPEKSFLVKEDVMEVVVPAFEGEMGILKDHISIISFLKPGIIKILSKSGD 60

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS-SATTDLEKAEA 184
           + Y+V  G      N+++ I+      ++ +D S  Q  L +  ++ S S   D  K   
Sbjct: 61  ENYYVEDGIVEFKNNNLS-ILTSSIFNLNDLDKSKQQDLLKQAEEEASKSEINDQSKYLV 119

Query: 185 QIGVDVHSALN 195
              ++V  +LN
Sbjct: 120 DQKIEVLKSLN 130


>gi|292670130|ref|ZP_06603556.1| ATP synthase F1 [Selenomonas noxia ATCC 43541]
 gi|422343598|ref|ZP_16424526.1| ATP synthase F1, epsilon subunit [Selenomonas noxia F0398]
 gi|292648229|gb|EFF66201.1| ATP synthase F1 [Selenomonas noxia ATCC 43541]
 gi|355378905|gb|EHG26085.1| ATP synthase F1, epsilon subunit [Selenomonas noxia F0398]
          Length = 144

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           A ++DM+I  ++ G++G+LP H+P +  L+P  + +H     K + V+ GF  +    + 
Sbjct: 17  AADIDMLIARSTGGEIGILPKHIPLVTGLQPHAMKIHVDGGEKLFAVAGGFMEVEPEKIT 76

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
            +      PID ID +  Q+      ++L 
Sbjct: 77  VLATAAEEPID-IDVNRAQRAYERAQERLK 105


>gi|146284501|ref|YP_001174654.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri A1501]
 gi|145572706|gb|ABP81812.1| ATP synthase F1, epsilon subunit [Pseudomonas stutzeri A1501]
          Length = 144

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MVI   + G +GVLPGH P + +LKPG V  +  G + + +++S GF  + 
Sbjct: 16  EELFSGLVEMVIAHGNLGDIGVLPGHAPLLTDLKPGPVRVIKQGGEEEIFYISGGFIEVQ 75

Query: 139 ANSV 142
            N V
Sbjct: 76  PNMV 79


>gi|406960015|gb|EKD87211.1| F0F1 ATP synthase subunit epsilon [uncultured bacterium]
          Length = 136

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL+++ + P   E+  +EVD V+VP   G++G+LP HV  + +++PG L   +      Y
Sbjct: 2   KLSLHILTP-DKEVLKEEVDEVLVPTVNGELGILPNHVSLLTQIQPGELITINSGKRNSY 60

Query: 129 FVSSGFAFIHANSV 142
            ++ G+  ++ N V
Sbjct: 61  AITGGYLEVNNNQV 74


>gi|384083041|ref|ZP_09994216.1| ATP synthase subunit epsilon [gamma proteobacterium HIMB30]
          Length = 140

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGF 134
           L   EV MVI     G +G+ PGH P I  LKPG V  V +  D + +FVS GF
Sbjct: 16  LYEGEVQMVIASGDLGDLGITPGHAPLITSLKPGPVRLVFENGDDELFFVSGGF 69


>gi|428316610|ref|YP_007114492.1| ATP synthase F1 subcomplex epsilon subunit [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428240290|gb|AFZ06076.1| ATP synthase F1 subcomplex epsilon subunit [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  V P  +   +   + VI+P++TGQ+G+L GH P +  L  GV+ V  G +     
Sbjct: 3   LTVRVVAPDKTVWDSN-AEEVILPSTTGQLGILSGHAPMLTALDTGVMRVRPGKEWVSIA 61

Query: 130 VSSGFAFIHANSVADII 146
           +  GFA I  N V  ++
Sbjct: 62  LMGGFAEIQENQVTILV 78


>gi|359687869|ref|ZP_09257870.1| F0F1 ATP synthase subunit epsilon [Leptospira licerasiae serovar
           Varillal str. MMD0835]
 gi|418758388|ref|ZP_13314570.1| ATP synthase F1, epsilon subunit [Leptospira licerasiae serovar
           Varillal str. VAR 010]
 gi|384114290|gb|EIE00553.1| ATP synthase F1, epsilon subunit [Leptospira licerasiae serovar
           Varillal str. VAR 010]
          Length = 126

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 2/102 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + +KL V+ + P    L   + D ++VP S G  GV PGH   ++ L  GVL V  GN T
Sbjct: 1   MAAKLDVSVISP-EKLLFHGDADSIVVPGSEGFFGVYPGHTSLVSLLGIGVLEVRQGNKT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
           K   +  GF  +  N V  I+       + ID +  QK L E
Sbjct: 60  KIAAIEGGFFEVRDNKVT-ILTDHGSLKEDIDLAAAQKALEE 100


>gi|254443043|ref|ZP_05056519.1| ATP synthase F1, epsilon subunit [Verrucomicrobiae bacterium
           DG1235]
 gi|198257351|gb|EDY81659.1| ATP synthase F1, epsilon subunit [Verrucomicrobiae bacterium
           DG1235]
          Length = 134

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 2/106 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  V P+  ++  + V+ V++P ++G++G++ GH+P + E++PG ++V          
Sbjct: 3   LQLEIVTPHG-KVYDETVESVVMPTTSGEVGIMTGHIPLLTEIQPGDIAVTKEGGVDHLA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
           VS GFA    + V+ I+A  A+  D ID + V+  +      L +A
Sbjct: 62  VSKGFAQCIGDKVS-ILAENAISEDDIDVNEVEAAMLRAQSALKNA 106


>gi|443329643|ref|YP_007374721.1| ATP synthase epsilon chain (chloroplast) [Equisetum hyemale]
 gi|441017834|gb|AGC26634.1| ATP synthase epsilon chain (chloroplast) [Equisetum hyemale]
          Length = 131

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV+ +I+  ++G++G+LP H P +  L  GV  +          +  GF  I  N V  I
Sbjct: 18  EVEEIILSTNSGKIGILPNHAPLLTALDIGVTQIRLNGQWSNMALMGGFGMIDRNEVI-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  EA     ID       + E  +KL  A  DLEKAE++
Sbjct: 77  LVNEAEKGSDID-------IEEAKRKLLQAKYDLEKAESR 109


>gi|408419423|ref|YP_006760837.1| F0F1 ATP synthase subunit epsilon [Desulfobacula toluolica Tol2]
 gi|405106636|emb|CCK80133.1| AtpC: ATP synthase epsilon chain (ATP synthase F1 sector epsilon
           subunit) (F-ATPase epsilon subunit) [Desulfobacula
           toluolica Tol2]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 5/129 (3%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL +  V P  + + ++E ++VI P S G+ G L GH   +  L  G L   D +  
Sbjct: 1   MAEKLFLEVVTPQKA-IVSEEAEIVIAPGSEGEFGALKGHTTFLTSLNVGTLRYKDNSGK 59

Query: 126 KKY-FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS--ATTDLEKA 182
           ++Y F++ GFA +  + V  I+A  A     ID     +      ++L+S  A  DL +A
Sbjct: 60  ERYLFINGGFAEVLPDKVT-ILAESAERRMNIDVERATQAKERAEKRLASKAADIDLVRA 118

Query: 183 EAQIGVDVH 191
           EA +   +H
Sbjct: 119 EAAMRRAIH 127


>gi|50083470|ref|YP_044980.1| F0F1 ATP synthase subunit epsilon [Acinetobacter sp. ADP1]
 gi|60389585|sp|Q6FFJ9.1|ATPE_ACIAD RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|49529446|emb|CAG67158.1| membrane-bound ATP synthase , F1 sector, epsilon-subunit
           [Acinetobacter sp. ADP1]
          Length = 139

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V M+I   + G++G+LPGH P +  L+PG + V   N T++    SG        V  +
Sbjct: 19  QVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQPHVVTV 78

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +A  A+  D +D + + +      Q L++  +DL+ A A
Sbjct: 79  LADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAA 117


>gi|423721576|ref|ZP_17695758.1| ATP synthase F1, epsilon subunit [Geobacillus thermoglucosidans
           TNO-09.020]
 gi|383365379|gb|EID42675.1| ATP synthase F1, epsilon subunit [Geobacillus thermoglucosidans
           TNO-09.020]
          Length = 133

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++GVL GH+P +A L+   + +  G  T+   VS GF  +  + V  I
Sbjct: 19  DVEMVSTKAKSGELGVLAGHIPLVAPLEISAVRLKQGGKTEYIAVSGGFMEVRPDKVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   + ID +  Q       ++L S   D++   A++ +
Sbjct: 78  LAQAAERAEDIDVARAQAAKERAERRLQSKQDDIDFKRAELAL 120


>gi|328954126|ref|YP_004371460.1| ATP synthase subunit epsilon [Desulfobacca acetoxidans DSM 11109]
 gi|328454450|gb|AEB10279.1| ATP synthase epsilon chain [Desulfobacca acetoxidans DSM 11109]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD+V+ P   GQ GVL  H+P ++ L+ G +    G   +  F+  GFA +    V  I
Sbjct: 21  EVDIVVAPGVEGQFGVLVNHIPFLSALEIGEMYYRKGGQVEYIFIGGGFAEVTGAKVT-I 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLS---SATTDLEKAEAQI 186
           +A  A    +ID    ++      ++L+   +A  D  +AEA +
Sbjct: 80  LADSAERGKEIDIERAKRARERAEKRLAMGRTAEIDWARAEAAL 123


>gi|339496270|ref|YP_004716563.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri ATCC 17588
           = LMG 11199]
 gi|386022917|ref|YP_005940942.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri DSM 4166]
 gi|327482890|gb|AEA86200.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri DSM 4166]
 gi|338803642|gb|AEJ07474.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri ATCC 17588
           = LMG 11199]
          Length = 140

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MVI   + G +GVLPGH P + +LKPG V  +  G + + +++S GF  + 
Sbjct: 12  EELFSGLVEMVIAHGNLGDIGVLPGHAPLLTDLKPGPVRVIKQGGEEEIFYISGGFIEVQ 71

Query: 139 ANSV 142
            N V
Sbjct: 72  PNMV 75


>gi|323149173|ref|YP_004222002.1| ATP synthase CF1 epsilon subunit [Coccomyxa subellipsoidea C-169]
 gi|317467229|gb|ADV29850.1| ATP synthase CF1 epsilon subunit [Coccomyxa subellipsoidea C-169]
          Length = 133

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 1/104 (0%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           +E + +I+P +TGQMGVL  H P +  L  GV+      +     +  GFA +  N V  
Sbjct: 17  QEAEEIILPTNTGQMGVLTNHAPLMTALDVGVMLSRTKTEWTSVALMGGFALVKQNQVT- 75

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           ++  EA   + ID    +K   E   K   A+   +K EA   +
Sbjct: 76  VLVNEAESPEAIDTDEAEKSYQEAQAKWLEASGQKQKVEANFAL 119


>gi|312112617|ref|YP_003990933.1| ATP synthase F1 subunit epsilon [Geobacillus sp. Y4.1MC1]
 gi|336237079|ref|YP_004589695.1| ATP synthase F1 subunit epsilon [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217718|gb|ADP76322.1| ATP synthase F1, epsilon subunit [Geobacillus sp. Y4.1MC1]
 gi|335363934|gb|AEH49614.1| ATP synthase F1, epsilon subunit [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 134

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++GVL GH+P +A L+   + +  G  T+   VS GF  +  + V  I
Sbjct: 20  DVEMVSTKAKSGELGVLAGHIPLVAPLEISAVRLKQGGKTEYIAVSGGFMEVRPDKVT-I 78

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   + ID +  Q       ++L S   D++   A++ +
Sbjct: 79  LAQAAERAEDIDVARAQAAKERAERRLQSKQDDIDFKRAELAL 121


>gi|424911355|ref|ZP_18334732.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           viciae USDA 2370]
 gi|392847386|gb|EJA99908.1| ATP synthase, F1 epsilon subunit [Rhizobium leguminosarum bv.
           viciae USDA 2370]
          Length = 136

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M VL  H PT+  +KPG+++V     +T KY V  GFA I   
Sbjct: 16  LVSETVTEVVIPATLGEMTVLANHAPTMTTIKPGLVTVKFASGETHKYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
               ++A  AV  D + P  +Q+ +            D  KAE + G   H  L
Sbjct: 76  GCT-LLAESAVSADDMSPDTLQRRI------------DAAKAEIEEGNHHHEHL 116


>gi|262374658|ref|ZP_06067931.1| ATP synthase F1, epsilon subunit [Acinetobacter junii SH205]
 gi|262310448|gb|EEY91539.1| ATP synthase F1, epsilon subunit [Acinetobacter junii SH205]
          Length = 139

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V M+I   + G++G+LPGH P +  L+PG + V   N T++    SG        V  +
Sbjct: 19  QVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQPHVVTV 78

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +A  A+  D +D + + +   +  Q L++  +DL+
Sbjct: 79  LADSAIRADNLDEAAIMEARKQAEQLLANQKSDLD 113


>gi|433460026|ref|ZP_20417662.1| F0F1 ATP synthase subunit epsilon [Halobacillus sp. BAB-2008]
 gi|432192142|gb|ELK49055.1| F0F1 ATP synthase subunit epsilon [Halobacillus sp. BAB-2008]
          Length = 134

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S LTV+ V P    L     +MV   A +G++G+LPGH+P +A L    + +  G  +++
Sbjct: 2   STLTVSVVTPDGPVLE-DAFEMVSCKAESGELGILPGHIPMVAPLTISAVRLKGGERSER 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ--KGLAEFNQKLSSATTDLEKAE 183
             VS GF  +  + V  I+A  A     ID    Q  K  AE   +   A  D ++AE
Sbjct: 61  IAVSGGFLEVRPDKVT-ILAQSAERPSDIDADRAQMAKERAERRLQDKQADIDFQRAE 117


>gi|92116149|ref|YP_575878.1| F0F1 ATP synthase subunit epsilon [Nitrobacter hamburgensis X14]
 gi|119361397|sp|Q1QQS9.1|ATPE1_NITHX RecName: Full=ATP synthase epsilon chain 1; AltName: Full=ATP
           synthase F1 sector epsilon subunit 1; AltName:
           Full=F-ATPase epsilon subunit 1
 gi|91799043|gb|ABE61418.1| ATP synthase F1 subcomplex epsilon subunit [Nitrobacter
           hamburgensis X14]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +VD V VP   G  GVL GH P +A ++PG+L++  G   +K  V  G A +    +  +
Sbjct: 19  DVDQVDVPGVEGDFGVLAGHAPVVAAIRPGILTITTGGTPQKIIVLGGLAEVSEKGLT-V 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT-TDLEKA 182
           +A  A  I ++D +     +A    KL+    ++L+KA
Sbjct: 78  LADVATSIQELDRAQFADTIASMEAKLAEKEGSELDKA 115


>gi|405381038|ref|ZP_11034871.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. CF142]
 gi|397322506|gb|EJJ26911.1| ATP synthase, F1 epsilon subunit [Rhizobium sp. CF142]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)

Query: 73  NFVLPYASELSAKE-VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFV 130
           NF L     L   E V  V++PA+ G+M V+  H PT+  +KPG++SV     +K+ Y V
Sbjct: 6   NFELVSPERLLLSEMVTEVVIPATEGEMTVMANHAPTMTTIKPGIVSVRSSAGSKQDYVV 65

Query: 131 SSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
             GFA I       ++A  AVP+ +++         E  +++ +A  +LE
Sbjct: 66  FGGFADILPTGCT-LLAESAVPVQELNKD-------ELTRRIEAAKMELE 107


>gi|167564617|ref|ZP_02357533.1| F0F1 ATP synthase subunit epsilon [Burkholderia oklahomensis EO147]
 gi|167571759|ref|ZP_02364633.1| F0F1 ATP synthase subunit epsilon [Burkholderia oklahomensis C6786]
          Length = 141

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIA 147
            V +P   G++G+LPGH P I  ++PG + +  +  D +  FV+ G   +   +V  ++A
Sbjct: 22  FVALPGEAGELGILPGHTPLITRIRPGAVRIEAESGDEEFVFVAGGILEVQPGAVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+    +D +  ++      + L +A +DL+ A+AQ
Sbjct: 81  DTAIRGKDLDSAKAEEAKKRAEETLQNAKSDLDLAKAQ 118


>gi|56421892|ref|YP_149210.1| ATP synthase F0F1 subunit epsilon [Geobacillus kaustophilus HTA426]
 gi|261420762|ref|YP_003254444.1| F0F1 ATP synthase subunit epsilon [Geobacillus sp. Y412MC61]
 gi|297531557|ref|YP_003672832.1| ATP synthase F1 subunit epsilon [Geobacillus sp. C56-T3]
 gi|319768432|ref|YP_004133933.1| ATP synthase F1 subunit epsilon [Geobacillus sp. Y412MC52]
 gi|375010537|ref|YP_004984170.1| ATP synthase subunit epsilon [Geobacillus thermoleovorans
           CCB_US3_UF5]
 gi|81675684|sp|Q5KUJ4.1|ATPE_GEOKA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|152149010|pdb|2E5Y|A Chain A, Epsilon Subunit And Atp Complex Of F1f0-Atp Synthase From
           The Thermophilic Bacillus Ps3
 gi|152149011|pdb|2E5Y|B Chain B, Epsilon Subunit And Atp Complex Of F1f0-Atp Synthase From
           The Thermophilic Bacillus Ps3
 gi|8671464|dbj|BAA96810.1| FoF1-ATP synthase epsilon subunit [Bacillus sp. PS3]
 gi|56381734|dbj|BAD77642.1| F0F1-type ATP synthaseepsilon chain [Geobacillus kaustophilus
           HTA426]
 gi|261377219|gb|ACX79962.1| ATP synthase F1, epsilon subunit [Geobacillus sp. Y412MC61]
 gi|297254809|gb|ADI28255.1| ATP synthase F1, epsilon subunit [Geobacillus sp. C56-T3]
 gi|317113298|gb|ADU95790.1| ATP synthase F1, epsilon subunit [Geobacillus sp. Y412MC52]
 gi|359289386|gb|AEV21070.1| ATP synthase epsilon chain [Geobacillus thermoleovorans
           CCB_US3_UF5]
          Length = 133

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV V A +G++G+LPGH+P +A L+     +  G  T+   VS GF  +  + V  I
Sbjct: 19  DVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGKTQYIAVSGGFLEVRPDKVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   + ID    +       ++L S   D++   A++ +
Sbjct: 78  LAQAAERAEDIDVLRAKAAKERAERRLQSQQDDIDFKRAELAL 120


>gi|374365868|ref|ZP_09623954.1| F0F1 ATP synthase subunit epsilon [Cupriavidus basilensis OR16]
 gi|373102522|gb|EHP43557.1| F0F1 ATP synthase subunit epsilon [Cupriavidus basilensis OR16]
          Length = 138

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSG 133
           V+   S + + +   V +P  +G++G+LPGH P I  ++PG + +   + ++++ FV+ G
Sbjct: 8   VVSAESSIFSGQAKFVALPGESGELGILPGHTPLITRIQPGAVRIEKADGSEEFVFVAGG 67

Query: 134 FAFI---HANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
              +   H   +AD  A+    +D+      ++   E  Q  SS   DL +A+ ++ V
Sbjct: 68  ILEVQPKHVTVLAD-TAIRGGDLDEAKAQEAKRAAEELMQNQSS-DLDLARAQGELAV 123


>gi|114798087|ref|YP_760592.1| ATP synthase F1 subunit epsilon [Hyphomonas neptunium ATCC 15444]
 gi|119367737|sp|Q0C101.1|ATPE_HYPNA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|114738261|gb|ABI76386.1| ATP synthase F1, epsilon subunit [Hyphomonas neptunium ATCC 15444]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL  + V P A EL + +VD VI P + G+ GVL  H P +  LK GV+ V +G+  
Sbjct: 1   MADKLHFSLVSP-ARELFSGQVDHVIAPGTEGEFGVLVNHAPFMTTLKNGVVRVLEGDVV 59

Query: 126 K-KYFVSSGFA 135
           + +++V  GFA
Sbjct: 60  RHRFYVRGGFA 70


>gi|87301229|ref|ZP_01084070.1| ATP synthase subunit epsilon [Synechococcus sp. WH 5701]
 gi|87284197|gb|EAQ76150.1| ATP synthase subunit epsilon [Synechococcus sp. WH 5701]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           D VI+P+++GQ+G+L GHV  +  L  GV+ +  G D     +  GFA + AN V  ++
Sbjct: 20  DEVILPSTSGQVGILTGHVSMLTALDVGVMRLRSGKDWTSIALMGGFAEVEANEVTVLV 78


>gi|294085412|ref|YP_003552172.1| H+-transporting two-sector ATPase subunit delta/epsilon [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664987|gb|ADE40088.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 117

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADII 146
           +MV+ P S G  G +P H P +A L  GV+ VH+G     +Y +  G A +   SV  I+
Sbjct: 22  EMVVAPGSEGLFGAMPRHAPMLANLDRGVVEVHEGGKIINRYMIDGGLADVSGESVT-IL 80

Query: 147 AVEAVPIDQIDPSLVQK 163
           A  A  +D  D + +++
Sbjct: 81  AERAEDLDTADAARLKE 97


>gi|358449482|ref|ZP_09159966.1| ATP synthase F1, epsilon subunit [Marinobacter manganoxydans
           MnI7-9]
 gi|385333419|ref|YP_005887370.1| ATP synthase subunit epsilon [Marinobacter adhaerens HP15]
 gi|311696569|gb|ADP99442.1| ATP synthase epsilon chain [Marinobacter adhaerens HP15]
 gi|357226237|gb|EHJ04718.1| ATP synthase F1, epsilon subunit [Marinobacter manganoxydans
           MnI7-9]
          Length = 140

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           V+M+I   S G +G+ PGH P + +LKPG +  +  G + +  +VS G+  +  N V  +
Sbjct: 21  VEMLIAAGSEGDLGIAPGHTPLLTQLKPGPIRIIKQGGEEEILYVSGGYLEVQPNLVT-L 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +A  AV    +D +   +   E  + L++ T + E
Sbjct: 80  LADTAVRAKDVDEAAALEAQKEAEKALANKTGEFE 114


>gi|148284423|ref|YP_001248513.1| ATP synthase subunit epsilon [Orientia tsutsugamushi str. Boryong]
 gi|146739862|emb|CAM79803.1| ATP synthase epsilon chain [Orientia tsutsugamushi str. Boryong]
          Length = 134

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADI 145
           VDM+++P   G + VLP H+P +  LK G++ VH +  +  ++ +S G   + +  V DI
Sbjct: 26  VDMLVLPGLEGVLAVLPQHLPMLVVLKFGIVEVHYNDRNIDRFTISGGIVKVDS-QVVDI 84

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           I++ A+    ID   ++  + E N   SS  + L + E +
Sbjct: 85  ISMFAMNCTHIDGLKIKAKIEEINAVTSSKQSTLLQEEHK 124


>gi|372000169|gb|AEX65161.1| F0F1 ATP synthase epsilon chain [Portulaca oleracea]
          Length = 129

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P ++GQ+GVLP H P    +  G+L +   +      +  GFA I  N +  +
Sbjct: 14  EVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEIT-V 72

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  EA   + IDP   Q       + L  A  +L KAE +
Sbjct: 73  LVNEAERGNDIDPRSTQ-------ETLEKAEANLRKAEGK 105


>gi|406036456|ref|ZP_11043820.1| F0F1 ATP synthase subunit epsilon [Acinetobacter parvus DSM 16617 =
           CIP 108168]
          Length = 139

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V M+I   + G++G+LPGH P +  L+PG + V   N T++    SG        V  +
Sbjct: 19  QVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQPHVVTV 78

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +A  A+  D +D + + +   +  Q L++  +DL+
Sbjct: 79  LADSAIRADNLDEAAIMEARKQAEQLLANQKSDLD 113


>gi|399090511|ref|ZP_10754087.1| ATP synthase, F1 epsilon subunit [Caulobacter sp. AP07]
 gi|398027729|gb|EJL21266.1| ATP synthase, F1 epsilon subunit [Caulobacter sp. AP07]
          Length = 86

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           +KL  + V P   EL + EVD V  P + G  GVLP H P +  L+ G ++V DG+  + 
Sbjct: 2   AKLHFSLVAP-ERELFSAEVDQVDAPGTEGDFGVLPNHAPFMTTLREGRVTVRDGSTVRL 60

Query: 128 YFVSSGFA 135
           + +  GFA
Sbjct: 61  FDIQGGFA 68


>gi|15600746|ref|NP_254240.1| ATP synthase F0F1 subunit epsilon [Pseudomonas aeruginosa PAO1]
 gi|107104655|ref|ZP_01368573.1| hypothetical protein PaerPA_01005734 [Pseudomonas aeruginosa PACS2]
 gi|116053704|ref|YP_794031.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152988157|ref|YP_001351666.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa PA7]
 gi|218894656|ref|YP_002443526.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa LESB58]
 gi|254237771|ref|ZP_04931094.1| ATP synthase epsilon chain [Pseudomonas aeruginosa C3719]
 gi|254243100|ref|ZP_04936422.1| ATP synthase epsilon chain [Pseudomonas aeruginosa 2192]
 gi|296392420|ref|ZP_06881895.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa PAb1]
 gi|313111496|ref|ZP_07797297.1| ATP synthase epsilon chain [Pseudomonas aeruginosa 39016]
 gi|355650934|ref|ZP_09056362.1| ATP synthase subunit epsilon [Pseudomonas sp. 2_1_26]
 gi|386061738|ref|YP_005978260.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa M18]
 gi|386069225|ref|YP_005984529.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa NCGM2.S1]
 gi|392987277|ref|YP_006485864.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa DK2]
 gi|416856633|ref|ZP_11912197.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa 138244]
 gi|416873263|ref|ZP_11917371.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa 152504]
 gi|418587901|ref|ZP_13151922.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa MPAO1/P1]
 gi|418591592|ref|ZP_13155488.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa MPAO1/P2]
 gi|419757356|ref|ZP_14283699.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|420142726|ref|ZP_14650312.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa CIG1]
 gi|421153083|ref|ZP_15612645.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa ATCC
           14886]
 gi|421164105|ref|ZP_15622760.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa ATCC
           25324]
 gi|421171568|ref|ZP_15629423.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa ATCC
           700888]
 gi|421177816|ref|ZP_15635461.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa CI27]
 gi|421183679|ref|ZP_15641128.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa E2]
 gi|421520126|ref|ZP_15966797.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa PAO579]
 gi|424943640|ref|ZP_18359403.1| ATP synthase epsilon chain [Pseudomonas aeruginosa NCMG1179]
 gi|451983673|ref|ZP_21931949.1| ATP synthase epsilon chain [Pseudomonas aeruginosa 18A]
 gi|452877521|ref|ZP_21954799.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa VRFPA01]
 gi|20137485|sp|Q9HT21.1|ATPE_PSEAE RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|122256276|sp|Q02DF5.1|ATPE_PSEAB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166990385|sp|A6VF31.1|ATPE_PSEA7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|226740275|sp|B7V790.1|ATPE_PSEA8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|9951893|gb|AAG08938.1|AE004967_9 ATP synthase epsilon chain [Pseudomonas aeruginosa PAO1]
 gi|115588925|gb|ABJ14940.1| ATP synthase epsilon chain [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169702|gb|EAZ55213.1| ATP synthase epsilon chain [Pseudomonas aeruginosa C3719]
 gi|126196478|gb|EAZ60541.1| ATP synthase epsilon chain [Pseudomonas aeruginosa 2192]
 gi|150963315|gb|ABR85340.1| ATP synthase F1, epsilon subunit [Pseudomonas aeruginosa PA7]
 gi|218774885|emb|CAW30703.1| ATP synthase epsilon chain [Pseudomonas aeruginosa LESB58]
 gi|310883799|gb|EFQ42393.1| ATP synthase epsilon chain [Pseudomonas aeruginosa 39016]
 gi|334841621|gb|EGM20246.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa 138244]
 gi|334845234|gb|EGM23800.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa 152504]
 gi|346060086|dbj|GAA19969.1| ATP synthase epsilon chain [Pseudomonas aeruginosa NCMG1179]
 gi|347308044|gb|AEO78158.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa M18]
 gi|348037784|dbj|BAK93144.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa NCGM2.S1]
 gi|354826458|gb|EHF10670.1| ATP synthase subunit epsilon [Pseudomonas sp. 2_1_26]
 gi|375041413|gb|EHS34114.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa MPAO1/P1]
 gi|375049651|gb|EHS42142.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa MPAO1/P2]
 gi|384396155|gb|EIE42575.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|392322782|gb|AFM68162.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa DK2]
 gi|403244502|gb|EJY58372.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa CIG1]
 gi|404346045|gb|EJZ72397.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa PAO579]
 gi|404519769|gb|EKA30487.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa ATCC
           700888]
 gi|404524367|gb|EKA34716.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa ATCC
           14886]
 gi|404526068|gb|EKA36303.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa ATCC
           25324]
 gi|404528678|gb|EKA38741.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa CI27]
 gi|404539773|gb|EKA49220.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa E2]
 gi|451758619|emb|CCQ84472.1| ATP synthase epsilon chain [Pseudomonas aeruginosa 18A]
 gi|452185742|gb|EME12760.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa VRFPA01]
 gi|453044731|gb|EME92453.1| F0F1 ATP synthase subunit epsilon [Pseudomonas aeruginosa
           PA21_ST175]
          Length = 141

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
           +E+ +  V+MVI   + G +G+ PGH P I +LKPG +  V  G + + Y++S GF  + 
Sbjct: 14  AEIFSGLVEMVIAHGALGDLGIAPGHAPLITDLKPGPIRLVKQGGEQEVYYISGGFLEVQ 73

Query: 139 ANSV 142
            N V
Sbjct: 74  PNMV 77


>gi|428221150|ref|YP_007105320.1| ATP synthase F1 subunit epsilon [Synechococcus sp. PCC 7502]
 gi|427994490|gb|AFY73185.1| ATP synthase, F1 epsilon subunit [Synechococcus sp. PCC 7502]
          Length = 132

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 2/124 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P    L A   D VI+P+STGQ+G+L  H P  A L  GVL     N  +   
Sbjct: 3   LTVKVISPGEIILDAT-ADEVILPSSTGQLGILTNHAPLTAVLDIGVLRFKTKNQWEAIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           V  G A +  N V  ++   A+    +D + V++ L    + L+S   D ++ + Q   D
Sbjct: 62  VMGGVAEVEENEVT-VLVNSAITGSNVDVTKVRQELEAAEKHLASVKDDDKQGKIQAVQD 120

Query: 190 VHSA 193
           V  A
Sbjct: 121 VKRA 124


>gi|220932615|ref|YP_002509523.1| ATP synthase F1 subunit epsilon [Halothermothrix orenii H 168]
 gi|254809368|sp|B8CZ09.1|ATPE_HALOH RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|219993925|gb|ACL70528.1| ATP synthase F1, epsilon subunit [Halothermothrix orenii H 168]
          Length = 134

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +PS + +  V P     S + V+++I PA  G++G+LP H P +  LK GV+ V    + 
Sbjct: 1   MPSTIRLEVVTPEKVVFS-EPVNILIAPAIDGEIGILPKHTPLVTGLKTGVMRVKKDGEE 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
            K  +S GF  +  + +  I+    +P  +ID    +  L    ++L+S
Sbjct: 60  VKISISEGFMEVKPDEINVIVRTAELP-HEIDVERARDALKRAEKRLNS 107


>gi|313199632|ref|YP_004021248.1| ATP synthase CF1 epsilon subunit [Isoetes flaccida]
 gi|291575361|gb|ADE18074.1| ATP synthase CF1 epsilon subunit [Isoetes flaccida]
          Length = 138

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+  ++GQ+GVLP H P +  L  G++ V          +  GFA +  N +  I
Sbjct: 18  EVQEIILSTNSGQIGVLPNHAPLLTALDIGIMKVRLNGQWSTMALMGGFAMMDNNQIT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  EA    +IDP        E  +    A TDL + E +
Sbjct: 77  LVNEAEEATEIDPE-------EAREAFQKAQTDLAQVEGR 109


>gi|410455308|ref|ZP_11309191.1| F0F1 ATP synthase subunit epsilon [Bacillus bataviensis LMG 21833]
 gi|409929506|gb|EKN66584.1| F0F1 ATP synthase subunit epsilon [Bacillus bataviensis LMG 21833]
          Length = 135

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++G+LPGH+P +A L+ G + +     T+   VS GF  +  + V  I
Sbjct: 19  DVEMVSTKAQSGELGILPGHIPMVAPLEIGAVRLKKDGKTEFIAVSGGFLEVRPDQVT-I 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT---TDLEKAE 183
           +A  A   + ID    Q+      Q+L        D  +AE
Sbjct: 78  LAQAAETSEHIDVERAQRAKERAEQRLKEQKLEHIDFRRAE 118


>gi|289548935|ref|YP_003473923.1| ATP synthase F1 subunit epsilon [Thermocrinis albus DSM 14484]
 gi|289182552|gb|ADC89796.1| ATP synthase F1, epsilon subunit [Thermocrinis albus DSM 14484]
          Length = 133

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           + +V  V +P   G++GVL  H+  +  LKPG+L   DG     + V+ GF  +    V 
Sbjct: 15  SNDVTSVNIPTVEGEIGVLEKHMYLMTLLKPGLLY-FDGKQENGFAVTYGFVDVTPTKVI 73

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            ++A EA PI  IDP   ++   E  +KL++ATT  E  E
Sbjct: 74  -VLAEEAYPIGSIDPGREKELFDEAVKKLATATTVEEYEE 112


>gi|148652010|ref|YP_001279103.1| F0F1 ATP synthase subunit epsilon [Psychrobacter sp. PRwf-1]
 gi|172048451|sp|A5WBW2.1|ATPE_PSYWF RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|148571094|gb|ABQ93153.1| ATP synthase F1 subcomplex epsilon subunit [Psychrobacter sp.
           PRwf-1]
          Length = 138

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 4/108 (3%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSS 132
           V+    E+ A E+ M+I   S G++G+L GH P I  LKPG + +   DGN+ +  +VS 
Sbjct: 8   VVSAREEIYAGEISMLIATGSEGEVGILAGHTPLITLLKPGSMRIQTPDGNE-EVIYVSG 66

Query: 133 GFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           G   +    V  ++A  AV    +D + + +   +  Q L++ T  L+
Sbjct: 67  GVLEVQPKLVT-VLADTAVRAHDLDEAKIVEARKKAEQMLANQTETLQ 113


>gi|110635548|ref|YP_675756.1| F0F1 ATP synthase subunit epsilon [Chelativorans sp. BNC1]
 gi|119367745|sp|Q11DD4.1|ATPE_MESSB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|110286532|gb|ABG64591.1| ATP synthase F1 subcomplex epsilon subunit [Chelativorans sp. BNC1]
          Length = 135

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 64/118 (54%), Gaps = 2/118 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS-VHDGNDTKKYFVSSGFAFIHAN 140
           L ++EV+ V++P + G+M V+  H P +  +KPGV++ V  G++ +++ V  GFA I  +
Sbjct: 16  LLSEEVEQVVIPGTEGEMTVMAEHAPVMTGIKPGVITVVRAGSEREQFVVFGGFADITPD 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
               ++A  A  + ++D + + + + E   ++  A     + +A+  +   + L  AL
Sbjct: 76  G-CRLLAESATRVKELDRADLARRIEEVRAEVQGARDHETRTKAEEFLGQLTTLEGAL 132


>gi|421595390|ref|ZP_16039440.1| F0F1 ATP synthase subunit epsilon [Bradyrhizobium sp. CCGE-LA001]
 gi|404272502|gb|EJZ36132.1| F0F1 ATP synthase subunit epsilon [Bradyrhizobium sp. CCGE-LA001]
          Length = 135

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EVD V +P   G  GVL GH P +A ++PG+L++  G   +K  V  G A + + S   +
Sbjct: 19  EVDQVDIPGVEGDFGVLAGHAPFVAAIRPGILTITTGGRHEKIIVLGGLAEV-SESGLTV 77

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKL 172
           +A  A  + ++D +   + +AE  + L
Sbjct: 78  LADVATSLAELDRAQFAETIAEMEENL 104


>gi|377822093|ref|YP_004978464.1| ATP synthase F1 subunit epsilon [Burkholderia sp. YI23]
 gi|357936928|gb|AET90487.1| ATP synthase F1, epsilon subunit [Burkholderia sp. YI23]
          Length = 141

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSG 133
           V+    E+ + +   V +P   G++G+LPGH P I  ++PG + +   + T+++ FV+ G
Sbjct: 8   VVSAEEEIFSGQAKFVALPGEAGELGILPGHTPLITRIRPGAVRIEAEDGTEEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              I    V  ++A  A+    +D +  ++      + + + T++LE A AQ
Sbjct: 68  ILEIQPG-VVTVLADTAIRGADLDEAKAEQAKKRAEEAIQNNTSELEYATAQ 118


>gi|434387408|ref|YP_007098019.1| ATP synthase, F1 epsilon subunit [Chamaesiphon minutus PCC 6605]
 gi|428018398|gb|AFY94492.1| ATP synthase, F1 epsilon subunit [Chamaesiphon minutus PCC 6605]
          Length = 134

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +       D VI+P+ TGQ+G+L GH   +  L   V+ V  G D  K+ 
Sbjct: 3   LTVRVIAPDKTVWDGT-ADEVILPSITGQLGILSGHAALLTALDTAVMRVKAGKD--KWT 59

Query: 130 ---VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +  GFA +  N V  ++   A   ++ID    QK   E  QKL + ++D  + + Q
Sbjct: 60  PIALMGGFAEVDNNEVT-VLVNGAELGEKIDREQAQKEFTEAEQKLETVSSDNRQEQIQ 117


>gi|354558889|ref|ZP_08978142.1| ATP synthase epsilon chain [Desulfitobacterium metallireducens DSM
           15288]
 gi|353545213|gb|EHC14665.1| ATP synthase epsilon chain [Desulfitobacterium metallireducens DSM
           15288]
          Length = 136

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 4/116 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
            T + V P  + L  +E++ V++P   G +G+LP H P IA L  GV+      + KK  
Sbjct: 5   FTFHVVSPEGNVLK-EEIEFVVLPGVDGDLGILPNHAPMIAALDTGVVHYTVNGNKKKLA 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQID--PSLVQKGLAEFNQKLSSATTDLEKAE 183
           +S GF  +  N  A ++A  A   + ID   +L  K  AE      +  TD+++AE
Sbjct: 64  ISGGFVEVSENK-ATVLADTAEFAESIDVQRALEAKARAEKRLLQKAHDTDMKRAE 118


>gi|254430263|ref|ZP_05043966.1| ATP synthase F1, epsilon subunit [Cyanobium sp. PCC 7001]
 gi|197624716|gb|EDY37275.1| ATP synthase F1, epsilon subunit [Cyanobium sp. PCC 7001]
          Length = 134

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           D VI+P++TGQ+G+LPGHV  +A L  GV+ + +        +  GFA + A+ V  ++
Sbjct: 18  DEVILPSTTGQVGILPGHVTMLAALDTGVMRLREAGGWTSIALLGGFAEVEADEVTVLV 76


>gi|407801816|ref|ZP_11148659.1| ATP synthase subunit epsilon [Alcanivorax sp. W11-5]
 gi|407024133|gb|EKE35877.1| ATP synthase subunit epsilon [Alcanivorax sp. W11-5]
          Length = 144

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGF 134
           +L + EV+MV+   S G +G+LPGH P +  LKPG V  +  G + + ++V+ GF
Sbjct: 15  QLFSGEVEMVVAAGSEGDLGILPGHAPLLTGLKPGPVRIIKQGGEEEVFYVNGGF 69


>gi|86606207|ref|YP_474970.1| F0F1 ATP synthase subunit epsilon [Synechococcus sp. JA-3-3Ab]
 gi|119367799|sp|Q2JUB3.1|ATPE_SYNJA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|86554749|gb|ABC99707.1| ATP synthase F1, epsilon subunit [Synechococcus sp. JA-3-3Ab]
          Length = 135

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+PA++GQ+G+L  H P +  +  GV+ V  G       V  GFA +  N V  ++   
Sbjct: 22  VILPATSGQLGILTNHAPLLTAIGNGVMRVKAGGKWSAIAVMGGFAEVENNEVT-VLVNR 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           A   +++D +  Q  L + +Q L++++   E+ +A++
Sbjct: 81  AERGEKVDKAAAQALLDKASQVLNTSSDKQERLQAKL 117


>gi|390569477|ref|ZP_10249762.1| F0F1 ATP synthase subunit epsilon [Burkholderia terrae BS001]
 gi|389938337|gb|EIN00181.1| F0F1 ATP synthase subunit epsilon [Burkholderia terrae BS001]
          Length = 141

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           +   V +P   G++G+LPGH P I  ++PG + +   N  +++ FV+ G   +   +V  
Sbjct: 19  QAKFVALPGEAGELGILPGHTPLITRIRPGAVRIESENGEEEFVFVAGGILEVQPGAVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++A  A+    +D +  ++      + L +  ++LE A AQ
Sbjct: 78  VLADTAIRGKDLDEAKAEQARKRAEEALQNTGSNLEYATAQ 118


>gi|237749341|ref|ZP_04579821.1| H+-transporting two-sector ATPase [Oxalobacter formigenes OXCC13]
 gi|229380703|gb|EEO30794.1| H+-transporting two-sector ATPase [Oxalobacter formigenes OXCC13]
          Length = 140

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKY-FVSSGFAFI--HANS 141
           E + V++P   G++G+LP H P I  +KPG + +   G + ++Y FV+ G   +  HA +
Sbjct: 20  EAEFVVLPGELGELGILPKHAPLITRIKPGAVRIKVSGKEEEEYVFVAGGVLEVQPHAVT 79

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDV 190
           V    A+ A  +D+   S  +K LAE       +  D  KA+A+I + V
Sbjct: 80  VLADTAIRAKDLDEAKASEAKK-LAEDAILNRESQIDYAKAQAEIAMAV 127


>gi|153012227|ref|YP_001381742.1| ATP synthase CF1 epsilon subunit [Medicago truncatula]
 gi|358349387|ref|XP_003638719.1| ATP synthase epsilon chain [Medicago truncatula]
 gi|355504654|gb|AES85857.1| ATP synthase epsilon chain [Medicago truncatula]
          Length = 136

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF---VSSGFAFIHANSV 142
           EV  +I+  ++GQ+GVL  H P    L  G+L +   N+ +++    +  GFA I  N +
Sbjct: 18  EVKEIILSTNSGQIGVLKNHAPIATALDIGILKIRLNNNNRQWVTMALMGGFARIGNNEI 77

Query: 143 ADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
             ++      ID IDP   Q+ L      L+ A    +K EA + +
Sbjct: 78  TILVNDAEKSID-IDPQEAQQTLKIAEANLNKAEGKRQKIEANLAL 122


>gi|148558927|ref|YP_001259637.1| F0F1 ATP synthase subunit epsilon [Brucella ovis ATCC 25840]
 gi|148370184|gb|ABQ60163.1| ATP synthase F1, epsilon subunit [Brucella ovis ATCC 25840]
          Length = 138

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYFVSSGFAFIHA 139
           L + +V  V++P S   +  L GH P +  + PGV+SV   DG  T  Y V  GFA I  
Sbjct: 19  LLSAQVTEVVIPGSESYLTALAGHSPLMTTIMPGVVSVKLADGK-TDSYVVFGGFADITP 77

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
                ++A  A  +D IDP+ +Q  +    + L  A+++  + +A+I
Sbjct: 78  QGCT-VLAESATHVDDIDPADIQHRIDHARKVLEDASSNEHRTKAEI 123


>gi|347760631|ref|YP_004868192.1| ATP synthase F1 subunit epsilon [Gluconacetobacter xylinus NBRC
           3288]
 gi|347579601|dbj|BAK83822.1| ATP synthase F1 epsilon subunit [Gluconacetobacter xylinus NBRC
           3288]
          Length = 141

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFI---HA 139
           A + DMV++P S G +  +P H P +  L+ GV+ V++G   T ++FV+ GFA +   H 
Sbjct: 16  AHDADMVVMPGSEGDIAAMPDHAPLMLMLRGGVVDVYEGAAVTNRFFVAGGFADMAPTHC 75

Query: 140 NSVAD-IIAVEAVPIDQIDPSL 160
             +AD  + VE + +D  +  L
Sbjct: 76  TILADRALRVEDLSVDDAEARL 97


>gi|348027138|ref|YP_004766943.1| ATP synthase subunit epsilon [Megasphaera elsdenii DSM 20460]
 gi|341823192|emb|CCC74116.1| ATP synthase epsilon chain [Megasphaera elsdenii DSM 20460]
          Length = 140

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L +  + P A+ L  ++VD V+V A  G +G++P H P IA L    L    G   +   
Sbjct: 8   LHLEVITPDAAVLH-EDVDFVLVRALDGDLGIMPNHAPLIASLSIWPLCYDKGGKRQYVT 66

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           V+SGF  +H N+V  I      P D ID    +        +L++   D++ A A+    
Sbjct: 67  VASGFLEVHDNTVTVITPASEKPED-IDVDRAKSAEKRAEDRLAAHAADIDTARAE---- 121

Query: 190 VHSALNSAL 198
             +AL  AL
Sbjct: 122 --AALQRAL 128


>gi|186477772|ref|YP_001859242.1| F0F1 ATP synthase subunit epsilon [Burkholderia phymatum STM815]
 gi|226740231|sp|B2JJ94.1|ATPE_BURP8 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|184194231|gb|ACC72196.1| ATP synthase F1, epsilon subunit [Burkholderia phymatum STM815]
          Length = 141

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           +   V +P   G++G+LPGH P I  ++PG + +   N  +++ FV+ G   +   +V  
Sbjct: 19  QAKFVALPGEAGELGILPGHTPLITRIRPGAVRIESENGEEEFVFVAGGILEVQPGAVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++A  A+    +D +  ++      + L +  ++LE A AQ
Sbjct: 78  VLADTAIRGKDLDEAKAEQARKRAEEALQNTGSNLEYATAQ 118


>gi|110680692|ref|YP_683699.1| ATP synthase F0F1 subunit epsilon [Roseobacter denitrificans OCh
           114]
 gi|119367776|sp|Q162T0.1|ATPE_ROSDO RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|109456808|gb|ABG33013.1| ATP synthase F1, epsilon subunit [Roseobacter denitrificans OCh
           114]
          Length = 138

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ +V  V +P + G M  +  H PTI  L+PG+L     + T +Y V+ GFA I A+S
Sbjct: 16  LASGQVTAVQIPGADGDMTAMAEHAPTITTLRPGLLVTEGPDGTSEYVVTGGFAEITASS 75

Query: 142 VADIIAVEAVP 152
           ++ ++A  A+P
Sbjct: 76  IS-VLAERAIP 85


>gi|139387438|ref|YP_001122792.1| ATP synthase CF1 epsilon subunit [Phaseolus vulgaris]
 gi|112030960|gb|ABH88072.1| ATP synthase CF1 epsilon subunit [Phaseolus vulgaris]
 gi|158187163|gb|ABW22796.1| ATP synthase CF1 epsilon subunit [Phaseolus vulgaris]
          Length = 133

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P ++GQ+GVLP H P  + +  G+L +   +      +  GFA I+ N +  +
Sbjct: 18  EVKEIILPTNSGQIGVLPNHAPIASAVDIGILRIRLKDQWLTMALMGGFARINNNEIT-V 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  +A     IDP        E  Q L  A T+L +AE +
Sbjct: 77  LVNDAEKGSDIDPQ-------EAQQTLEIAETNLNQAEGK 109


>gi|384919237|ref|ZP_10019293.1| F0F1 ATP synthase subunit epsilon [Citreicella sp. 357]
 gi|384466848|gb|EIE51337.1| F0F1 ATP synthase subunit epsilon [Citreicella sp. 357]
          Length = 144

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +  + V P  + LSAK   +V +P + G + V PGH P I  L+PG++ V     T+++ 
Sbjct: 5   MQFDLVSPERNLLSAK-ASLVSIPGAEGDLAVGPGHEPMITTLRPGIVKVDTDKGTEQFV 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQID 157
           V+ GF  I A     ++A +AVP   +D
Sbjct: 64  VTGGFVEIGAG--VSVLAEKAVPYADMD 89


>gi|167587927|ref|ZP_02380315.1| F0F1 ATP synthase subunit epsilon [Burkholderia ubonensis Bu]
          Length = 141

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 59/113 (52%), Gaps = 4/113 (3%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSS 132
           V+    ++ + +   V +P   G++G+LPGH P I  ++PG + +    GND +  FV+ 
Sbjct: 8   VVSAEEQIFSGQAKFVALPGEAGELGILPGHTPLITRIRPGAVRIETESGND-EFVFVAG 66

Query: 133 GFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           G   +   +V  ++A  A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 67  GILEVQPGAVT-VLADTAIRGKDLDSAKAEEARKRAEETLQNAKSDIDLAKAQ 118


>gi|262281305|ref|ZP_06059086.1| predicted protein [Acinetobacter calcoaceticus RUH2202]
 gi|262257131|gb|EEY75868.1| predicted protein [Acinetobacter calcoaceticus RUH2202]
          Length = 139

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V M+I   + G++G+LPGH P +  L+PG + V   N T++    SG        V  ++
Sbjct: 20  VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQPHVVTVL 79

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           A  A+  D +D + + +      Q L++  +DL+ A A
Sbjct: 80  ADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAA 117


>gi|18860317|ref|NP_569635.1| ATP synthase CF1 epsilon subunit [Psilotum nudum]
 gi|22653658|sp|Q8WI12.1|ATPE_PSINU RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|18389470|dbj|BAB84222.1| ATP synthase epsilon subunit [Psilotum nudum]
 gi|441018023|gb|AGC26799.1| ATP synthase epsilon chain (chloroplast) [Psilotum nudum]
          Length = 133

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+  + GQMG+LP H P +  L  GV+ +          +  GFA I  N +  I
Sbjct: 17  EVREIILSTNNGQMGILPNHAPLLTALDIGVMKIRIDERWSNMALMGGFATIDNNQIT-I 75

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
           +  EA    +IDP   Q+   +    L+ A    +  EA +
Sbjct: 76  LVNEAEKSSEIDPEEAQETFQKAQANLTRAEGKRKTIEAHL 116


>gi|407778557|ref|ZP_11125820.1| F0F1 ATP synthase subunit epsilon [Nitratireductor pacificus
           pht-3B]
 gi|407299634|gb|EKF18763.1| F0F1 ATP synthase subunit epsilon [Nitratireductor pacificus
           pht-3B]
          Length = 135

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDG-NDTKKYFVSSGFAFIHAN 140
           L +++V  V++P + G+M V+  H PT+  +KPGV++V+      ++Y V  GFA I   
Sbjct: 16  LVSQDVASVVIPGTEGEMTVMADHAPTMTSIKPGVITVNAATGGAERYVVFGGFADILPE 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
               ++A  AV +D+I+   + + + E  + ++ A
Sbjct: 76  GCT-VLAESAVHVDEINREDLARRIQEAREDVADA 109


>gi|389696084|ref|ZP_10183726.1| ATP synthase, F1 epsilon subunit [Microvirga sp. WSM3557]
 gi|388584890|gb|EIM25185.1| ATP synthase, F1 epsilon subunit [Microvirga sp. WSM3557]
          Length = 133

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD--GNDTKKYFVSSGFAFIHA 139
           L + EVD V++PA+ G M VL GH P +  LK G L V    GN  ++  V  GFA I  
Sbjct: 15  LFSGEVDAVVLPATEGDMTVLAGHSPVMTTLKTGFLVVTSTPGNG-RRVLVRGGFADISQ 73

Query: 140 NSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
           N +  ++A  A+P ++I   ++ + +        +AT
Sbjct: 74  NGLT-VLAERALPEEEITQDILDQEILTAEMHYDAAT 109


>gi|449096134|ref|YP_007428625.1| ATP synthase subunit epsilon [Bacillus subtilis XF-1]
 gi|449030049|gb|AGE65288.1| ATP synthase subunit epsilon [Bacillus subtilis XF-1]
          Length = 108

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 94  ASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPI 153
           A +G +G+LPGH+PT+A LK G + +     T+   VS GF  +  + V  I+A  A   
Sbjct: 3   AESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEMVAVSGGFVEVRPDHVT-ILAQAAETA 61

Query: 154 DQIDPSLVQKGLAEFNQKLS--SATTDLEKAE 183
           + ID    +       ++L+  S  TD+ +AE
Sbjct: 62  EGIDKERAEAARQRAQERLNTQSDDTDIRRAE 93


>gi|443474506|ref|ZP_21064481.1| ATP synthase F1 subcomplex epsilon subunit [Pseudanabaena biceps
           PCC 7429]
 gi|443020764|gb|ELS34685.1| ATP synthase F1 subcomplex epsilon subunit [Pseudanabaena biceps
           PCC 7429]
          Length = 134

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 2/124 (1%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  + L     + VI+P+STGQ+G+L  H P I+ L+ GVL +          
Sbjct: 3   LTVKVISPDRTILDTV-AEEVILPSSTGQLGILTDHAPLISALEVGVLRLRKDKAWSAIA 61

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
           ++ GFA +  N V  ++    +   +I+    +K L E  Q L+   T+ ++ + Q   +
Sbjct: 62  LTGGFAEVEENEVTVLVRSGELG-SEINSDEARKKLEEAEQALAGIKTEDKQGKIQAEQN 120

Query: 190 VHSA 193
           V +A
Sbjct: 121 VRNA 124


>gi|393777127|ref|ZP_10365420.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia sp. PBA]
 gi|392715828|gb|EIZ03409.1| ATP synthase, F1 sector, epsilon subunit [Ralstonia sp. PBA]
          Length = 138

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY- 128
           + V+ V   AS  S  E   V +P   G++G+LPGH P I  +KPG + +     ++++ 
Sbjct: 4   IHVDVVSAEASIFSG-EAKFVALPGEAGELGILPGHTPLITRIKPGAVRIESAEGSEEFV 62

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           FV+ G   +  N V  ++A  A+    +D +   +      + L + +++L+ A AQ
Sbjct: 63  FVAGGILEVQPNLVT-VLADTAIRGKDLDEAKASEAKRAAEEALQNQSSELDLARAQ 118


>gi|283782165|ref|YP_003372920.1| ATP synthase F1 subunit epsilon [Pirellula staleyi DSM 6068]
 gi|283440618|gb|ADB19060.1| ATP synthase F1, epsilon subunit [Pirellula staleyi DSM 6068]
          Length = 132

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
           ++ + V +P   G++GV PGH P I  L  G L +   + T   ++  GF  ++ N+V  
Sbjct: 19  QDAEFVALPLYDGELGVAPGHSPMIGRLGYGQLRIRTASGTTSMYLDGGFVQVN-NNVVS 77

Query: 145 IIAVEAVPIDQIDPSLVQK 163
           I+   AVP   +D   ++K
Sbjct: 78  ILTSRAVPATSLDKQAIEK 96


>gi|149375665|ref|ZP_01893434.1| F0F1-type ATP synthase, epsilon subunit [Marinobacter algicola
           DG893]
 gi|149360067|gb|EDM48522.1| F0F1-type ATP synthase, epsilon subunit [Marinobacter algicola
           DG893]
          Length = 140

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           V+M+I   S G +G+ PGH P + +LKPG +  +  G + +  +VS G+  +  N V  +
Sbjct: 21  VEMLIAAGSEGDLGIAPGHTPLLTQLKPGPIRIIKQGGEEEILYVSGGYLEVQPNLVT-L 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
           +A  AV    +D +   +   E  + L++ T + E
Sbjct: 80  LADTAVRAKDVDEAAAIEAQREAEKALANQTGEFE 114


>gi|304320619|ref|YP_003854262.1| ATP synthase F1 subunit epsilon [Parvularcula bermudensis HTCC2503]
 gi|303299521|gb|ADM09120.1| ATP synthase F1, epsilon subunit [Parvularcula bermudensis
           HTCC2503]
          Length = 126

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHAN 140
           EL + E   V VP + G   V+ GH P ++ L PG+L +    + K+++V  GFA + A 
Sbjct: 14  ELFSGEAAAVTVPGTEGDFQVMAGHAPLMSTLSPGLLQISTNGEAKRFYVRGGFADVTAQ 73

Query: 141 SVADIIAVEAVPIDQI 156
            +  I+A  A+P  ++
Sbjct: 74  GLT-ILAEIAIPEGEL 88


>gi|53721002|ref|YP_109988.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           K96243]
 gi|53724017|ref|YP_104463.1| ATP synthase F0F1 subunit epsilon [Burkholderia mallei ATCC 23344]
 gi|67643092|ref|ZP_00441841.1| ATP synthase F1, epsilon subunit [Burkholderia mallei GB8 horse 4]
 gi|76810572|ref|YP_331593.1| ATP synthase F0F1 subunit epsilon [Burkholderia pseudomallei 1710b]
 gi|121598820|ref|YP_994633.1| F0F1 ATP synthase subunit epsilon [Burkholderia mallei SAVP1]
 gi|124386193|ref|YP_001027566.1| ATP synthase F0F1 subunit epsilon [Burkholderia mallei NCTC 10229]
 gi|126438987|ref|YP_001060960.1| ATP synthase F0F1 subunit epsilon [Burkholderia pseudomallei 668]
 gi|126449201|ref|YP_001082536.1| ATP synthase F0F1 subunit epsilon [Burkholderia mallei NCTC 10247]
 gi|126453887|ref|YP_001068260.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1106a]
 gi|134281647|ref|ZP_01768355.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 305]
 gi|167000140|ref|ZP_02265963.1| ATP synthase F1, epsilon subunit [Burkholderia mallei PRL-20]
 gi|167721820|ref|ZP_02405056.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei DM98]
 gi|167740792|ref|ZP_02413566.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 14]
 gi|167818007|ref|ZP_02449687.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 91]
 gi|167826370|ref|ZP_02457841.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 9]
 gi|167847889|ref|ZP_02473397.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei B7210]
 gi|167896447|ref|ZP_02483849.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 7894]
 gi|167904848|ref|ZP_02492053.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei NCTC
           13177]
 gi|167913126|ref|ZP_02500217.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 112]
 gi|167921064|ref|ZP_02508155.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           BCC215]
 gi|217424043|ref|ZP_03455543.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 576]
 gi|226193128|ref|ZP_03788738.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237814344|ref|YP_002898795.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           MSHR346]
 gi|242314852|ref|ZP_04813868.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1106b]
 gi|254175070|ref|ZP_04881731.1| ATP synthase F1, epsilon subunit [Burkholderia mallei ATCC 10399]
 gi|254184021|ref|ZP_04890612.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1655]
 gi|254186487|ref|ZP_04893004.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194733|ref|ZP_04901164.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei S13]
 gi|254201538|ref|ZP_04907902.1| ATP synthase F1, epsilon subunit [Burkholderia mallei FMH]
 gi|254206874|ref|ZP_04913225.1| ATP synthase F1, epsilon subunit [Burkholderia mallei JHU]
 gi|254258142|ref|ZP_04949196.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1710a]
 gi|254298705|ref|ZP_04966156.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 406e]
 gi|254357428|ref|ZP_04973702.1| ATP synthase F1, epsilon subunit [Burkholderia mallei 2002721280]
 gi|386863695|ref|YP_006276644.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026b]
 gi|403520676|ref|YP_006654810.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           BPC006]
 gi|418394743|ref|ZP_12968838.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354a]
 gi|418537314|ref|ZP_13102954.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026a]
 gi|418542358|ref|ZP_13107797.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258a]
 gi|418548841|ref|ZP_13113939.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258b]
 gi|418554849|ref|ZP_13119610.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354e]
 gi|60389510|sp|Q62FR4.1|ATPE_BURMA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|60389520|sp|Q63PI1.1|ATPE_BURPS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|119361416|sp|Q3JXW0.1|ATPE_BURP1 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222436|sp|A3MQK0.1|ATPE_BURM7 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222437|sp|A2S6J7.1|ATPE_BURM9 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222438|sp|A1V8T0.1|ATPE_BURMS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222439|sp|A3P0Y9.1|ATPE_BURP0 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|166222440|sp|A3NF39.1|ATPE_BURP6 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|52211416|emb|CAH37407.1| ATP synthase epsilon chain [Burkholderia pseudomallei K96243]
 gi|52427440|gb|AAU48033.1| ATP synthase F1, epsilon subunit [Burkholderia mallei ATCC 23344]
 gi|76580025|gb|ABA49500.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1710b]
 gi|121227630|gb|ABM50148.1| ATP synthase F1, epsilon subunit [Burkholderia mallei SAVP1]
 gi|124294213|gb|ABN03482.1| ATP synthase F1, epsilon subunit [Burkholderia mallei NCTC 10229]
 gi|126218480|gb|ABN81986.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 668]
 gi|126227529|gb|ABN91069.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1106a]
 gi|126242071|gb|ABO05164.1| ATP synthase F1, epsilon subunit [Burkholderia mallei NCTC 10247]
 gi|134247314|gb|EBA47400.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 305]
 gi|147747432|gb|EDK54508.1| ATP synthase F1, epsilon subunit [Burkholderia mallei FMH]
 gi|147752416|gb|EDK59482.1| ATP synthase F1, epsilon subunit [Burkholderia mallei JHU]
 gi|148026492|gb|EDK84577.1| ATP synthase F1, epsilon subunit [Burkholderia mallei 2002721280]
 gi|157808570|gb|EDO85740.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 406e]
 gi|157934172|gb|EDO89842.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|160696115|gb|EDP86085.1| ATP synthase F1, epsilon subunit [Burkholderia mallei ATCC 10399]
 gi|169651483|gb|EDS84176.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei S13]
 gi|184214553|gb|EDU11596.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1655]
 gi|217393106|gb|EEC33128.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 576]
 gi|225934728|gb|EEH30705.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504520|gb|ACQ96838.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei
           MSHR346]
 gi|238524341|gb|EEP87774.1| ATP synthase F1, epsilon subunit [Burkholderia mallei GB8 horse 4]
 gi|242138091|gb|EES24493.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1106b]
 gi|243063943|gb|EES46129.1| ATP synthase F1, epsilon subunit [Burkholderia mallei PRL-20]
 gi|254216831|gb|EET06215.1| ATP synthase F1, epsilon subunit [Burkholderia pseudomallei 1710a]
 gi|385350023|gb|EIF56575.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026a]
 gi|385355750|gb|EIF61911.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258a]
 gi|385357059|gb|EIF63138.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1258b]
 gi|385369593|gb|EIF74906.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354e]
 gi|385374664|gb|EIF79503.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 354a]
 gi|385660823|gb|AFI68246.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei 1026b]
 gi|403076318|gb|AFR17898.1| F0F1 ATP synthase subunit epsilon [Burkholderia pseudomallei
           BPC006]
          Length = 141

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSG 133
           V+    ++ + +   V +P   G++G+LPGH P I  ++PG + +  +  D +  FV+ G
Sbjct: 8   VVSAEEQIFSGQAKFVALPGEAGELGILPGHTPLITRIRPGAVRIESESGDEEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQ 118


>gi|290490118|gb|ADD31466.1| ATP synthase CF1 epsilon subunit protein [Bulnesia arborea]
          Length = 137

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+  ++GQ+G+LP H P    +   +L +         F+  GFA I  N V  I
Sbjct: 18  EVKEIILSTNSGQIGILPNHAPIATAVDISILKIRLNEQWITMFLMDGFARIRNNEVT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  +A     IDP        E  Q L  A  DL+KAE +
Sbjct: 77  LVKDAEKGSDIDPQ-------EAKQTLEMAEADLKKAEGK 109


>gi|299771941|ref|YP_003733967.1| F0F1 ATP synthase subunit epsilon [Acinetobacter oleivorans DR1]
 gi|298702029|gb|ADI92594.1| F0F1 ATP synthase subunit epsilon [Acinetobacter oleivorans DR1]
          Length = 139

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V M+I   + G++G+LPGH P +  L+PG + V   N T++    SG        V  ++
Sbjct: 20  VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQPHVVTVL 79

Query: 147 AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           A  A+  D +D + + +      Q L++  +DL+ A A
Sbjct: 80  ADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAA 117


>gi|62318464|dbj|BAD94440.1| epsilon subunit of F1F0-ATP synthase [Acidithiobacillus
           ferrooxidans]
          Length = 141

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 32/55 (58%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           DMV+ P   G++G+LP H P +  L+PG L +  G +T+  FV+ G   I  + V
Sbjct: 22  DMVVAPGEMGELGILPRHAPLLTGLRPGELRIIHGAETEYLFVNGGILEIQPDMV 76


>gi|83749929|ref|ZP_00946887.1| ATP synthase epsilon chain [Ralstonia solanacearum UW551]
 gi|207739163|ref|YP_002257556.1| atp synthase epsilon chain 2 (atp synthase f1 sectorepsilon subunit
           2) protein [Ralstonia solanacearum IPO1609]
 gi|83723403|gb|EAP70623.1| ATP synthase epsilon chain [Ralstonia solanacearum UW551]
 gi|206592536|emb|CAQ59442.1| atp synthase epsilon chain 2 (atp synthase f1 sectorepsilon subunit
           2) protein [Ralstonia solanacearum IPO1609]
          Length = 139

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHANSV---AD 144
            V+VP + G++G+LPGH P +  L+PG + +   ND +   FV+ GFA +    V   AD
Sbjct: 22  FVVVPGTEGELGILPGHEPLLTRLRPGTVRLTLENDEEVILFVAGGFAHVLPREVILLAD 81

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
             AV A  +D+      +K   E  Q  S +  D  +A+A++
Sbjct: 82  -TAVRARDLDEAKAQQARKAAEELLQN-SRSKIDYARAQAEL 121


>gi|428696863|ref|YP_007025164.1| ATP synthase CF1 epsilon subunit [Erodium cygnorum]
          Length = 133

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 70  LTVNF-VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           +T+N  VL     L   EV  +I+   +G++GVLP H+P +  L  G+L +   +     
Sbjct: 1   MTLNLRVLTPKRILWDSEVKEIILSTDSGEIGVLPNHIPIVTGLDIGILKIRLNDQWFTM 60

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            +  GFA I  N +  + A +A    +IDP        E  Q L  A  +L KAEA+
Sbjct: 61  ALMGGFARIVNNEIT-VFAHDAEKGSEIDPQ-------EAQQTLQIAKDNLRKAEAE 109


>gi|83718437|ref|YP_443799.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis E264]
 gi|167582833|ref|ZP_02375707.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           TXDOH]
 gi|167620973|ref|ZP_02389604.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis Bt4]
 gi|119361418|sp|Q2STF0.1|ATPE_BURTA RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|83652262|gb|ABC36325.1| ATP synthase F1, epsilon subunit [Burkholderia thailandensis E264]
          Length = 141

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIA 147
            V +P   G++G+LPGH P I  ++PG + +  +  D +  FV+ G   +   +V  ++A
Sbjct: 22  FVALPGEAGELGILPGHTPLITRIRPGAVRIEAESGDEEFVFVAGGILEVQPGAVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 81  DTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQ 118


>gi|345017131|ref|YP_004819484.1| ATP synthase subunit epsilon [Thermoanaerobacter wiegelii Rt8.B1]
 gi|392940454|ref|ZP_10306098.1| ATP synthase, F1 epsilon subunit [Thermoanaerobacter siderophilus
           SR4]
 gi|344032474|gb|AEM78200.1| ATP synthase epsilon chain [Thermoanaerobacter wiegelii Rt8.B1]
 gi|392292204|gb|EIW00648.1| ATP synthase, F1 epsilon subunit [Thermoanaerobacter siderophilus
           SR4]
          Length = 137

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+ +IV  +TGQ+G+L GH+P  A +  G L +      ++ F+S GF  +  +SV  +
Sbjct: 20  DVEEIIVTITTGQIGILKGHIPMTAAVGTGTLQIKKDGQWREAFISGGFMEVKRDSVTIL 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
            +    P ++ID +  Q       +KL    +  E
Sbjct: 80  SSAVEWP-EEIDIARAQAAKERAEEKLRQKRSKQE 113


>gi|104784433|ref|YP_610931.1| F0F1 ATP synthase subunit epsilon [Pseudomonas entomophila L48]
 gi|123255141|sp|Q1I2I8.1|ATPE_PSEE4 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|95113420|emb|CAK18148.1| ATP synthase F1, epsilon subunit [Pseudomonas entomophila L48]
          Length = 139

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIH 138
            E+ +  V+MV+   + G +G+ PGH P I  LKPG +++   G D + +++S GF  + 
Sbjct: 14  GEIFSGLVEMVVAHGNLGDLGIAPGHAPLITNLKPGPITLTKQGGDREVFYISGGFLEVQ 73

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
            N V  ++A        +D +  Q+ L      L++ ++D +
Sbjct: 74  PNMVK-VLADTVQRAADLDEAQAQEALKAAENALNAKSSDFD 114


>gi|126725130|ref|ZP_01740973.1| ATP synthase F1, epsilon subunit [Rhodobacterales bacterium
           HTCC2150]
 gi|126706294|gb|EBA05384.1| ATP synthase F1, epsilon subunit [Rhodobacteraceae bacterium
           HTCC2150]
          Length = 131

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
           L++ +   V +P S G M  +  H P I  L+PGVL++     T +Y V  GFA + A S
Sbjct: 15  LASGQASEVRIPGSEGDMTAMADHAPVITTLRPGVLTIVSDAGTAEYAVIGGFAEVTATS 74

Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
            + ++A +A+P+ ++   ++   +++    L++A+ D
Sbjct: 75  TS-VLAEKAMPVAEVTADVLAGLVSDAETALANASVD 110


>gi|241252456|ref|XP_002403674.1| ATP synthase H+ transporting, F1 complex, delta subunit precursor,
           putative [Ixodes scapularis]
 gi|215496543|gb|EEC06183.1| ATP synthase H+ transporting, F1 complex, delta subunit precursor,
           putative [Ixodes scapularis]
          Length = 168

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 7/143 (4%)

Query: 61  QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
           Q  T     + + F  P  +     +V  V VP+ +G  G+LP HVP +A +KPGV++V 
Sbjct: 27  QARTYADGGMPLTFASPAETFFDKVDVKQVDVPSYSGNFGILPHHVPALAVIKPGVVTVF 86

Query: 121 -DGNDTKKYF----VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
            +  D +++F     SS     H    + +++           +  ++GLA+  Q +++A
Sbjct: 87  TNEGDAQRFFGTPLQSSQKHASHRLDGSSMMSGSGFGATTF--TACREGLAKAQQAVTAA 144

Query: 176 TTDLEKAEAQIGVDVHSALNSAL 198
            TD  +AEAQI V+VH AL  A+
Sbjct: 145 ATDEARAEAQIEVEVHEALVKAV 167


>gi|167838423|ref|ZP_02465282.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           MSMB43]
 gi|424901543|ref|ZP_18325059.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           MSMB43]
 gi|390931918|gb|EIP89318.1| F0F1 ATP synthase subunit epsilon [Burkholderia thailandensis
           MSMB43]
          Length = 141

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIA 147
            V +P   G++G+LPGH P I  ++PG + +  +  D +  FV+ G   +   +V  ++A
Sbjct: 22  FVALPGEAGELGILPGHTPLITRIRPGAVRIEAESGDEEFVFVAGGILEVQPGAVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 81  DTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQ 118


>gi|398348100|ref|ZP_10532803.1| F0F1 ATP synthase subunit epsilon [Leptospira broomii str. 5399]
          Length = 127

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 2/99 (2%)

Query: 69  KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           KL V+ + P    L   + D +IVP S G  GVLPGH   ++ L  GVL +  G+ TK  
Sbjct: 5   KLKVSVISP-EKLLYTGDADSLIVPGSEGFFGVLPGHTSLVSLLGIGVLEIRQGSKTKIA 63

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAE 167
            +  GF  I  N+V  I+       ++ID    +K L +
Sbjct: 64  VIEGGFFEIRNNNVT-ILTDHGSLKEEIDLEAAKKALED 101


>gi|407717459|ref|YP_006838739.1| H+-transporting two-sector ATPase subunit delta/epsilon
           [Cycloclasticus sp. P1]
 gi|407257795|gb|AFT68236.1| H+-transporting two-sector ATPase, delta/epsilon subunit
           [Cycloclasticus sp. P1]
          Length = 138

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           +MV  P   G++G+ P H P +  LKPG + V+ G     +F+S G   I  + V  ++A
Sbjct: 22  EMVFAPGELGELGIAPRHAPLVTRLKPGEVRVNTGKVELDFFISGGILEIQPHLVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
             AV  D +D +       +  + L++ T+D++ A+
Sbjct: 81  DTAVRADDLDEAKALAAKKQAEEVLANKTSDIDFAK 116


>gi|372325626|ref|ZP_09520215.1| ATP synthase epsilon chain [Oenococcus kitaharae DSM 17330]
 gi|366984434|gb|EHN59833.1| ATP synthase epsilon chain [Oenococcus kitaharae DSM 17330]
          Length = 142

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK 126
            ++LT + V P  +  +  +V + ++    G++G++  H+P +  LK   + +H G D  
Sbjct: 9   ENQLTASIVTPDGTVYNQSDVSLAVLDTLEGEIGIMANHIPIVVALKISQMRIHRGKDED 68

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQ 162
            Y V+ GFA    N++  ++A  A     ID S  Q
Sbjct: 69  LYTVNGGFAEFSNNTLT-VVADSAENAKDIDVSRAQ 103


>gi|149918542|ref|ZP_01907031.1| ATP synthase, F1 epsilon subunit [Plesiocystis pacifica SIR-1]
 gi|149820618|gb|EDM80030.1| ATP synthase, F1 epsilon subunit [Plesiocystis pacifica SIR-1]
          Length = 151

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%)

Query: 79  ASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIH 138
           +SE +A EV+ V +PA+ G+MGV P H+P +  + PGV+    G   ++  V  GF  + 
Sbjct: 26  SSENTAIEVEGVELPAALGEMGVRPRHLPFLTPVVPGVVRFRFGGQDRRMAVGRGFLEVS 85

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
            +    I+   AV   ++D   +     E  + L    T
Sbjct: 86  KDGTVTILTERAVRSWEVDTDAISSERDEVEEALQEFRT 124


>gi|372000167|gb|AEX65160.1| F0F1 ATP synthase epsilon chain [Pereskiopsis diguetii]
          Length = 133

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+P ++GQ+GVLP H P    +  G+L +          +  GFA I  N +  +
Sbjct: 18  EVKEIILPTNSGQIGVLPNHAPIATAVDIGILRIRLNEQWLTMALMGGFARIGNNEIT-V 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  EA     IDP        E  Q L  A  +L KAE +
Sbjct: 77  LVNEAERGSDIDPQ-------EAQQTLEKAEANLSKAEGK 109


>gi|296228634|ref|XP_002759895.1| PREDICTED: ATP synthase subunit delta, mitochondrial-like
           [Callithrix jacchus]
          Length = 130

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 67  PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGND 124
           P +++  F  P     +   V  V VP  TG  G+L  HVPT+  L+PG++ VH  DG  
Sbjct: 35  PGQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGT- 93

Query: 125 TKKYFVSSG 133
           T KYF  SG
Sbjct: 94  TSKYFGESG 102


>gi|51209971|ref|YP_063635.1| ATP synthase CF1 epsilon subunit [Gracilaria tenuistipitata var.
           liui]
 gi|60389561|sp|Q6B8S5.1|ATPE_GRATL RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|50657725|gb|AAT79710.1| ATP synthase CF1 epsilon subunit [Gracilaria tenuistipitata var.
           liui]
          Length = 134

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           VI+P+STGQ+G+L GH+P +  +  GV+ V    + +   +  GFA +  + +  I+   
Sbjct: 22  VILPSSTGQVGILKGHIPLLTAIDIGVMRVRIEKEWQPIILLGGFAEVKDDKIT-ILVNG 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           A  + +I+    ++ L +  + L+ A  D +K EA
Sbjct: 81  AEEVSKIEIKAAKENLEKATKILNEARNDKDKIEA 115


>gi|408786315|ref|ZP_11198052.1| F0F1 ATP synthase subunit epsilon [Rhizobium lupini HPC(L)]
 gi|408487687|gb|EKJ96004.1| F0F1 ATP synthase subunit epsilon [Rhizobium lupini HPC(L)]
          Length = 136

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 82  LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
           L ++ V  V++PA+ G+M VL  H PT+  +KPG+++V     +T KY V  GFA I   
Sbjct: 16  LVSETVTEVVIPATLGEMTVLANHEPTMTTIKPGLVTVKFASGETHKYVVFGGFADILPT 75

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSAL 194
               ++A  AV  D + P  +Q+ +            D  KAE + G   H  L
Sbjct: 76  GCT-LLAESAVSADDMSPDTLQRRI------------DAAKAEIEEGNHHHEHL 116


>gi|339448706|ref|ZP_08652262.1| F0F1 ATP synthase subunit epsilon [Lactobacillus fructivorans KCTC
           3543]
          Length = 142

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 2/109 (1%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTK 126
           S LTV+ V P     S  +V M ++    G +G+L  HVP IA L+ G      +GND  
Sbjct: 7   SVLTVSIVTPDGEVYSNDQVTMAVIETMMGDLGILANHVPVIASLRIGETRFKFNGNDMD 66

Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
              V+ GFA    N++  I+A  A     ID S          QK+  A
Sbjct: 67  TVAVNGGFAEFSNNTLT-IVADSAERKGDIDVSRATHARERAEQKIKDA 114


>gi|323148836|ref|YP_004221929.1| ATP synthase CF1 epsilon subunit [Erodium carvifolium]
 gi|428697534|ref|YP_007025818.1| ATP synthase CF1 epsilon subunit [Erodium moschatum]
 gi|316926300|gb|ADU58153.1| ATP synthase CF1 epsilon subunit [Erodium carvifolium]
          Length = 133

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 70  LTVNF-VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           +T+N  VL     L   EV  +I+   +G++GVLP H+P +  L  G+L +   +     
Sbjct: 1   MTLNLRVLTPKRILWDSEVKEIILSTDSGEIGVLPNHIPIVTGLDIGILKIRLNDQWFTM 60

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            +  GFA I  N +  + A +A     IDP        E  Q L  A  +L KAEA+
Sbjct: 61  ALMGGFARIVNNEIT-VFAHDAEKASDIDPQ-------EAQQTLQIAKDNLRKAEAE 109


>gi|49076830|gb|AAT49605.1| PA5553, partial [synthetic construct]
          Length = 142

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
           +E+ +  V+MVI   + G +G+ PGH P I +LKPG +  V  G + + Y++S GF  + 
Sbjct: 14  AEIFSGLVEMVIAHGALGDLGIAPGHAPLITDLKPGPIRLVKQGGEQEVYYISGGFLEVQ 73

Query: 139 ANSVADIIAVEAVPIDQID 157
            N +A ++A   V    +D
Sbjct: 74  PN-MAKVLADTVVRAGDLD 91


>gi|374704448|ref|ZP_09711318.1| F0F1 ATP synthase subunit epsilon [Pseudomonas sp. S9]
          Length = 141

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
           +E+ +  V+MVI   + G +G+ PGH P + +LKPG +  +  G +T+ +++S GF  + 
Sbjct: 14  AEMFSGLVEMVIAHGNLGDIGITPGHAPLLTDLKPGPIRLIKQGGETEVFYISGGFLEVQ 73

Query: 139 ANSV 142
            N V
Sbjct: 74  PNMV 77


>gi|237751982|ref|ZP_04582462.1| H+transporting two-sector ATPase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376549|gb|EEO26640.1| H+transporting two-sector ATPase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 130

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           L ++ V P   ++ +  V  V +P S G+ GVLPGHV  +  L+PGV+ V +  D KK  
Sbjct: 4   LKLDIVTPEG-KIFSNSVKSVTLPGSEGEFGVLPGHVGIVTTLRPGVIEV-EKVDGKKEI 61

Query: 130 VSSGFAFIHANSVA-DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
           V+  +  +  +  + D++A  AV I+    S + + +A   Q L  +T +
Sbjct: 62  VAINWGHVKVDETSVDVLAEGAVDINGDSESEIAQAIANAKQLLEESTDN 111


>gi|257790800|ref|YP_003181406.1| ATP synthase F1 subunit epsilon [Eggerthella lenta DSM 2243]
 gi|325831945|ref|ZP_08165042.1| ATP synthase F1, epsilon subunit [Eggerthella sp. HGA1]
 gi|257474697|gb|ACV55017.1| ATP synthase F1, epsilon subunit [Eggerthella lenta DSM 2243]
 gi|325486266|gb|EGC88718.1| ATP synthase F1, epsilon subunit [Eggerthella sp. HGA1]
          Length = 136

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)

Query: 72  VNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYF 129
            + V P A +L + EV++V+VP   G+MG L GH P ++ L  G   V     ++T  Y 
Sbjct: 6   CDIVTPVA-KLVSDEVELVVVPGVEGEMGFLKGHAPLVSVLADGEARVKAVGASETVHYA 64

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           +  G+  +  + V  I+A  A+P   ID   V++ LA   ++LS 
Sbjct: 65  LQGGYVEVTDDKVI-ILADRALPAADIDVEQVREQLAGIEEQLSG 108


>gi|197120310|ref|YP_002140737.1| F0F1 ATP synthase subunit epsilon [Geobacter bemidjiensis Bem]
 gi|226740258|sp|B5EFI6.1|ATPE_GEOBB RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|197089670|gb|ACH40941.1| ATP synthase F1, epsilon subunit [Geobacter bemidjiensis Bem]
          Length = 138

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 2/111 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           +  KL V  V PY   LS +EVD +    + G+ GVLPGH P +  LK G L+      +
Sbjct: 1   MAEKLKVELVTPYKKVLS-EEVDEITATGALGEFGVLPGHAPFLTSLKIGELAYRKDGVS 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSAT 176
               ++ G+ F   N    ++   A   D+ID    +  L     +L   T
Sbjct: 60  HHMALNWGY-FEVENDTVTVLVETAEKADEIDLERAKAALGRAETELKGLT 109


>gi|126696967|ref|YP_001091853.1| F0F1 ATP synthase subunit epsilon [Prochlorococcus marinus str. MIT
           9301]
 gi|166222482|sp|A3PES7.1|ATPE_PROM0 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|126544010|gb|ABO18252.1| ATP synthase, Epsilon subunit [Prochlorococcus marinus str. MIT
           9301]
          Length = 134

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 35/57 (61%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSV 142
           E + VI+P++TGQ+G+LPGH+  +  +  GVL V   +  K   +  GFA I ++ V
Sbjct: 18  EAEEVILPSTTGQLGILPGHISLVTAIDIGVLRVRINSQWKSIALMGGFAEIESDEV 74


>gi|239828584|ref|YP_002951208.1| F0F1 ATP synthase subunit epsilon [Geobacillus sp. WCH70]
 gi|239808877|gb|ACS25942.1| ATP synthase F1, epsilon subunit [Geobacillus sp. WCH70]
          Length = 134

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+MV   A +G++G+LPGH+P +A L+   + +  G +TK   VS GF  +  + V  I
Sbjct: 20  DVEMVSTKAKSGELGILPGHIPLVAPLEISAVRLKKGGETKYIAVSGGFLEVRPDKVT-I 78

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
           +A  A   + ID +  +       ++L S   D++   A++ +
Sbjct: 79  LAQSAEKAEDIDVARAKAAKERAERRLQSKQDDIDFKRAELAL 121


>gi|424865287|ref|ZP_18289156.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86B]
 gi|424865321|ref|ZP_18289190.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86B]
 gi|400758893|gb|EJP73093.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86B]
 gi|400758927|gb|EJP73127.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86B]
          Length = 137

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHAN 140
           E+ + E  MV    S G++G+ PGH P +  L PG + V + +D + +F S GF  +  +
Sbjct: 14  EIFSGEATMVFATGSLGELGIAPGHTPLLTGLAPGPVRVQNNSDEETFFCSGGFIEVQPD 73

Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
            V  I++  A   D +D +   K   +  + LS    +++
Sbjct: 74  IVT-ILSDTAERADSLDEAAAIKAKEQAEKDLSDKDDNID 112


>gi|326391020|ref|ZP_08212569.1| ATP synthase F1, epsilon subunit [Thermoanaerobacter ethanolicus JW
           200]
 gi|325992965|gb|EGD51408.1| ATP synthase F1, epsilon subunit [Thermoanaerobacter ethanolicus JW
           200]
          Length = 137

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V+ +IV  +TGQ+G+L GH+P  A +  G L +      ++ F+S GF  +  +SV  +
Sbjct: 20  DVEEIIVTITTGQIGILKGHIPLTAAVGTGTLQIKKDGQWREAFISGGFMEVKRDSVTIL 79

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
            +    P ++ID +  Q       +KL    +  E
Sbjct: 80  SSAVEWP-EEIDIARAQAAKERAEEKLRQKRSKQE 113


>gi|430809335|ref|ZP_19436450.1| F0F1 ATP synthase subunit epsilon [Cupriavidus sp. HMR-1]
 gi|429498218|gb|EKZ96731.1| F0F1 ATP synthase subunit epsilon [Cupriavidus sp. HMR-1]
          Length = 138

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY- 128
           + V+ V   AS  S +    V +P  +G++G+LPGH P I  ++PG + +   +  +++ 
Sbjct: 4   ILVDVVSAEASIFSGQ-AKFVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGGEEFV 62

Query: 129 FVSSGFAFI---HANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           FV+ G   +   H   +AD  A+    +D+   S  ++   E  Q  SS   DL+ A AQ
Sbjct: 63  FVAGGILEVQPQHVTVLAD-TAIRGTDLDEAKASEAKRAAEELLQNQSS---DLDLARAQ 118


>gi|374299941|ref|YP_005051580.1| ATP synthase subunit epsilon [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552877|gb|EGJ49921.1| ATP synthase epsilon chain [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 142

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 2/120 (1%)

Query: 66  IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
           + +++ +  V P    LS K VD V  P   G+ GVLP H+P ++ L  G L    G  T
Sbjct: 1   MSNQIQLEIVTPDRKVLSEK-VDYVGAPGIVGEFGVLPNHIPFLSALGIGNLYYKLGGKT 59

Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              F++ GFA +  + V  ++A  A    +ID    +K       +L     D+  A AQ
Sbjct: 60  HYVFIAGGFAEVGPDRVT-VLAEIAERAAEIDVERARKARERAESRLQKRAEDVNFARAQ 118


>gi|153870903|ref|ZP_02000203.1| ATPase, delta/epsilon subunit [Beggiatoa sp. PS]
 gi|152072633|gb|EDN69799.1| ATPase, delta/epsilon subunit [Beggiatoa sp. PS]
          Length = 140

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIH 138
           +E+ A   +MVI PA  G++G+LP H P I +L  G + +  + ND + +++S G   + 
Sbjct: 14  AEIFAGLAEMVIAPAVQGEVGILPRHAPYITQLSEGAVRLKLNENDEESFYISGGMLEVQ 73

Query: 139 ANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            + V  +++  A+    +D     +      Q LS    D E A AQ
Sbjct: 74  PHKVT-VLSDTALRAHDLDEKAAVEAKKRAEQLLSDKQADFEYARAQ 119


>gi|300866627|ref|ZP_07111315.1| ATP synthase epsilon chain [Oscillatoria sp. PCC 6506]
 gi|300335399|emb|CBN56475.1| ATP synthase epsilon chain [Oscillatoria sp. PCC 6506]
          Length = 135

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           D VI+P++TGQ+G+L GH P +  L  GV+ V  G +     +  GFA +  N V  ++
Sbjct: 20  DEVILPSTTGQLGILSGHAPLLTALDTGVMRVRPGKNWVAIALMGGFAEVEENEVTILV 78


>gi|147679146|ref|YP_001213361.1| F0F1 ATP synthase subunit epsilon [Pelotomaculum thermopropionicum
           SI]
 gi|226740304|sp|A5CYE1.1|ATPE_PELTS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|146275243|dbj|BAF60992.1| F0F1-type ATP synthase, epsilon subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 134

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 84  AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
           +++V  ++ P + G++GVLP H P I  L  G++ +     T K  V+ GF  +  N V 
Sbjct: 19  SEDVSFLVAPGTEGELGVLPNHAPLITSLNIGIMRIQQEGKTFKVVVTGGFMEVRDNKVT 78

Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
            ++A  A   ++ID +  +       ++L+  T D++   A++      AL  ALT
Sbjct: 79  -VLANAAERAEEIDVARAEAARRRAEERLAKKTPDIDVLRAEL------ALKRALT 127


>gi|307731458|ref|YP_003908682.1| ATP synthase F1 subunit epsilon [Burkholderia sp. CCGE1003]
 gi|323527840|ref|YP_004229993.1| ATP synthase F1 subunit epsilon [Burkholderia sp. CCGE1001]
 gi|407715184|ref|YP_006835749.1| F-type H+-transporting ATPase subunit epsilon [Burkholderia
           phenoliruptrix BR3459a]
 gi|307585993|gb|ADN59391.1| ATP synthase F1, epsilon subunit [Burkholderia sp. CCGE1003]
 gi|323384842|gb|ADX56933.1| ATP synthase F1, epsilon subunit [Burkholderia sp. CCGE1001]
 gi|407237368|gb|AFT87567.1| F-type H+-transporting ATPase subunit epsilon [Burkholderia
           phenoliruptrix BR3459a]
          Length = 141

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVADIIA 147
            V +P   G++G+LPGH P I  ++PG + +   N  +++ FV+ G   I   +V  ++A
Sbjct: 22  FVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEIQPGAVT-VLA 80

Query: 148 VEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+    +D +  +       + L +  ++LE A AQ
Sbjct: 81  DTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQ 118


>gi|160895870|ref|YP_001561452.1| F0F1 ATP synthase subunit epsilon [Delftia acidovorans SPH-1]
 gi|333912097|ref|YP_004485829.1| ATP synthase F1 subunit epsilon [Delftia sp. Cs1-4]
 gi|226740244|sp|A9BPU8.1|ATPE_DELAS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|160361454|gb|ABX33067.1| ATP synthase F1, epsilon subunit [Delftia acidovorans SPH-1]
 gi|333742297|gb|AEF87474.1| ATP synthase F1, epsilon subunit [Delftia sp. Cs1-4]
          Length = 138

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           E   V +P  +G++G+ P H P I  +KPG + +   + ++++ FV+ G   +  N V  
Sbjct: 19  EARFVALPGESGELGIFPRHTPLITRIKPGSVRIEMADGSEEFVFVAGGILEVQPNCVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALNSAL 198
           +++  A+    +D    +K   E  + L +A ++++ A AQ  + V +A  +AL
Sbjct: 78  VLSDTAIRGADLDAEKAEKAKLEAEEALKNAKSEVDLARAQSELAVMAAQIAAL 131


>gi|358061683|ref|ZP_09148337.1| ATP synthase F1, epsilon subunit [Clostridium hathewayi WAL-18680]
 gi|356700442|gb|EHI61948.1| ATP synthase F1, epsilon subunit [Clostridium hathewayi WAL-18680]
          Length = 132

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 11/113 (9%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAV 148
           MV +  + GQ+GV   H+P  A + PGVL +H+    +K  + SGF  I    V  +  V
Sbjct: 23  MVELTTTEGQIGVYANHIPLTAIISPGVLKIHEEGQVRKASLISGFMEILPEQVVIMAEV 82

Query: 149 EAVPIDQIDPSLVQKG--LAEFNQKLSSATTDLEKAEAQIGVDVHSALNSALT 199
              P ++ID +  ++    AE   K +SA TD  +AE         AL  ALT
Sbjct: 83  AEWP-EEIDANRAEEARVRAERRLKENSAETDTLRAEM--------ALKRALT 126


>gi|430747507|ref|YP_007206636.1| ATP synthase F1 subunit epsilon [Singulisphaera acidiphila DSM
           18658]
 gi|430019227|gb|AGA30941.1| ATP synthase, F1 epsilon subunit [Singulisphaera acidiphila DSM
           18658]
          Length = 148

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 10/110 (9%)

Query: 87  VDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADII 146
           V+ V++P   G++G+LPG  P I  L  G L       T++YF+  GFA +  + V  ++
Sbjct: 36  VEFVVLPLYDGELGILPGRSPLIGRLGYGELRTKSEGITQRYFIDGGFAEVR-DDVVTVL 94

Query: 147 AVEAVP---------IDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
              A+P           +++ +  Q+   +F+Q          +A+  IG
Sbjct: 95  TNRAIPAAKLDTAAAARELEQAQAQRAANDFDQAEKDKAIARARAQLHIG 144


>gi|300697407|ref|YP_003748068.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Ralstonia solanacearum CFBP2957]
 gi|299074131|emb|CBJ53676.1| ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit)
           [Ralstonia solanacearum CFBP2957]
          Length = 139

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHANSV---AD 144
            V+VP + G++G+LPGH P +  L+PG + +   ND +   FV+ GFA +    V   AD
Sbjct: 22  FVVVPGTEGELGILPGHEPLLTRLRPGTVRLTLENDDEVILFVAGGFAHVLPQEVILLAD 81

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
             AV A  +D+      +K   E  Q  S +  D  +A+A++
Sbjct: 82  -TAVRARDLDEAKAQQARKAAEELLQN-SRSKIDYARAQAEL 121


>gi|421898541|ref|ZP_16328907.1| atp synthase epsilon chain 2 (atp synthase f1 sectorepsilon subunit
           2) protein [Ralstonia solanacearum MolK2]
 gi|206589747|emb|CAQ36708.1| atp synthase epsilon chain 2 (atp synthase f1 sectorepsilon subunit
           2) protein [Ralstonia solanacearum MolK2]
          Length = 139

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHANSV---AD 144
            V+VP + G++G+LPGH P +  L+PG + +   ND +   FV+ GFA +    V   AD
Sbjct: 22  FVVVPGTEGELGILPGHEPLLTRLRPGTVRLTLENDDEVILFVAGGFAHVLPQEVILLAD 81

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
             AV A  +D+      +K   E  Q  S +  D  +A+A++
Sbjct: 82  -TAVRARDLDEAKAQQARKAAEELLQN-SRSKIDYARAQAEL 121


>gi|317488488|ref|ZP_07947039.1| ATP synthase [Eggerthella sp. 1_3_56FAA]
 gi|316912420|gb|EFV33978.1| ATP synthase [Eggerthella sp. 1_3_56FAA]
          Length = 136

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)

Query: 72  VNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKKYF 129
            + V P A +L + EV++V+VP   G+MG L GH P ++ L  G   V     ++T  Y 
Sbjct: 6   CDIVTPVA-KLVSDEVELVVVPGVEGEMGFLKGHAPLVSVLADGEARVKAVGASETVHYA 64

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS 174
           +  G+  +  + V  I+A  A+P   ID   V++ LA   ++LS 
Sbjct: 65  LQGGYVEVTDDKVI-ILADRALPAADIDVEQVREQLAGIEEQLSG 108


>gi|238025754|ref|YP_002909985.1| F0F1 ATP synthase subunit epsilon [Burkholderia glumae BGR1]
 gi|237874948|gb|ACR27281.1| F0F1 ATP synthase subunit epsilon [Burkholderia glumae BGR1]
          Length = 141

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSG 133
           V+    E+ + +   V +P  +G++G+LPGH P I  ++PG + +       ++ FV+ G
Sbjct: 8   VVSAEEEIFSGQAKFVALPGESGELGILPGHTPLITRIRPGAVRIESEAGADEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  ++      + L +A +D++ A+AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGRDLDAAKAEEAKRRAEETLQNAKSDIDLAKAQ 118


>gi|427732249|ref|YP_007078486.1| ATP synthase F1 subunit epsilon [Nostoc sp. PCC 7524]
 gi|427368168|gb|AFY50889.1| ATP synthase, F1 epsilon subunit [Nostoc sp. PCC 7524]
          Length = 137

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           LTV  + P  +   A E D V++P++TGQ+G+L GH P +  L  GVL V     T    
Sbjct: 3   LTVRVISPDKTVWDA-EADEVVLPSTTGQLGILSGHAPLLTALDTGVLRVRPSKSTNWQA 61

Query: 130 VS--SGFAFIHANSVADII 146
           ++   GFA +  N V  ++
Sbjct: 62  IALLGGFAEVEENEVTILV 80


>gi|94312424|ref|YP_585634.1| F0F1 ATP synthase subunit epsilon [Cupriavidus metallidurans CH34]
 gi|119367766|sp|Q1LHL1.1|ATPE_RALME RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|93356276|gb|ABF10365.1| F1 sector of membrane-bound ATP synthase, epsilon subunit
           [Cupriavidus metallidurans CH34]
          Length = 138

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 9/120 (7%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY- 128
           + V+ V   AS  S +    V +P  +G++G+LPGH P I  ++PG + +   +  +++ 
Sbjct: 4   ILVDVVSAEASIFSGQ-AKFVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGGEEFV 62

Query: 129 FVSSGFAFI---HANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           FV+ G   +   H   +AD  A+    +D+   S  ++   E  Q  SS   DL+ A AQ
Sbjct: 63  FVAGGILEVQPQHVTVLAD-TAIRGTDLDEAKASEAKRAAEEMLQNQSS---DLDLARAQ 118


>gi|386336127|ref|YP_006032297.1| ATP synthase epsilon chain (ATP synthase f1 sector epsilon subunit)
           [Ralstonia solanacearum Po82]
 gi|334198577|gb|AEG71761.1| ATP synthase epsilon chain (ATP synthase f1 sector epsilon subunit)
           [Ralstonia solanacearum Po82]
          Length = 139

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK-YFVSSGFAFIHANSV---AD 144
            V+VP + G++G+LPGH P +  L+PG + +   ND +   FV+ GFA +    V   AD
Sbjct: 22  FVVVPGTEGELGILPGHEPLLTRLRPGTVRLTLENDDEVILFVAGGFAHVLPQGVILLAD 81

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
             AV A  +D+      +K   E  Q  S +  D  +A+A++
Sbjct: 82  -TAVRARDLDEAKAQQARKAAEELLQN-SRSKIDYARAQAEL 121


>gi|71066577|ref|YP_265304.1| ATP synthase F0F1 subunit epsilon [Psychrobacter arcticus 273-4]
 gi|119367763|sp|Q4FQ38.1|ATPE_PSYA2 RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|71039562|gb|AAZ19870.1| ATP synthase F1 subcomplex epsilon subunit [Psychrobacter arcticus
           273-4]
          Length = 138

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 81  ELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSG 133
           EL + E+ M+I   + G++G+LPGH P I  LKPG + V   N  ++    SG
Sbjct: 14  ELYSGEISMLIASGTEGEIGILPGHTPLITLLKPGAMRVQTSNGEEEVIYVSG 66


>gi|402757044|ref|ZP_10859300.1| F0F1 ATP synthase subunit epsilon [Acinetobacter sp. NCTC 7422]
          Length = 139

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           +V M+I   + G++G+LPGH P +  L+PG + V   N T++    SG        V  +
Sbjct: 19  QVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSGGVLEVQPHVVTV 78

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +A  A+  D +D + + +   +    L++  +DL+ A A
Sbjct: 79  LADTAIRADNLDEAAIMEARKQAEALLANQKSDLDSAAA 117


>gi|331268172|ref|YP_004347821.1| ATP synthase CF1 epsilon subunit [Chlorella variabilis]
 gi|325296349|gb|ADZ05069.1| ATP synthase CF1 epsilon subunit [Chlorella variabilis]
          Length = 134

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           + D +I+P +TGQMGVL  H P I  L  GV  +   ++     +  GFA +  N V  I
Sbjct: 18  QADEIILPTNTGQMGVLTNHAPLITALDIGVTLIRSNSNWIPVALMGGFALVKQNQVT-I 76

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +  EA     I     +K   E   +L  +  + ++ EA
Sbjct: 77  LVNEAESAQTISVDKAEKAFEEAKTRLEESQGEKQRVEA 115


>gi|316931856|ref|YP_004106838.1| ATP synthase F1 subunit epsilon [Rhodopseudomonas palustris DX-1]
 gi|315599570|gb|ADU42105.1| ATP synthase F1, epsilon subunit [Rhodopseudomonas palustris DX-1]
          Length = 139

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFA 135
           EVD V +P + G  GVL GH P +A ++PG+L+V  G  T+K  V  G A
Sbjct: 23  EVDQVDIPGAEGDFGVLAGHAPVVALIRPGILTVTAGAATQKIVVLGGIA 72


>gi|187925862|ref|YP_001897504.1| F0F1 ATP synthase subunit epsilon [Burkholderia phytofirmans PsJN]
 gi|226740232|sp|B2T7J9.1|ATPE_BURPP RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|187717056|gb|ACD18280.1| ATP synthase F1, epsilon subunit [Burkholderia phytofirmans PsJN]
          Length = 141

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSG 133
           V+    ++ + +   V +P   G++G+LPGH P I  ++PG + +   N  +++ FV+ G
Sbjct: 8   VVSAEEQIFSGQAKFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              I   +V  ++A  A+    +D +  +       + L +  ++LE A AQ
Sbjct: 68  ILEIQPGAVT-VLADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQ 118


>gi|402297385|ref|ZP_10817157.1| ATP synthase subunit epsilon [Bacillus alcalophilus ATCC 27647]
 gi|401727435|gb|EJT00625.1| ATP synthase subunit epsilon [Bacillus alcalophilus ATCC 27647]
 gi|409179091|gb|AFV25634.1| protons transporter [Bacillus alcalophilus ATCC 27647]
          Length = 133

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + VN V P        +VDMV V    G++G+LP H+P +A L  G + + +G+  +K  
Sbjct: 4   INVNVVTPDGKVYDG-DVDMVSVRTVDGELGILPKHIPLVAPLTIGAVRLKNGSTVEKVA 62

Query: 130 VSSGFAFIHANSVADIIAVEAVPID-QIDPSLVQKGLAEFN-QKLSSATTDLEKAE 183
           VS GF  +  + V  +     +P D  +D +   K  AE   +++    TD ++A+
Sbjct: 63  VSGGFVEVRPDQVTILAEAAELPSDIDVDRAKQAKERAEKRLEEIKQEQTDSKRAQ 118


>gi|424863800|ref|ZP_18287712.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86A]
 gi|400757121|gb|EJP71333.1| ATP synthase F1, epsilon subunit [SAR86 cluster bacterium SAR86A]
          Length = 138

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 4/119 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           + +N V   + E+ + E  MV    + G++G+ PGH P +  L  G + V +G++ + +F
Sbjct: 5   MKINIV-SSSEEIYSGEATMVFATGTLGELGIAPGHTPLLTGLAAGPVRVQNGSEEEAFF 63

Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT--DLEKAEAQI 186
            S GF  +  + V  +++  A   + +D S   K      Q+L++  T  D  KA AQ+
Sbjct: 64  CSGGFLEVQPDLVT-VLSDTAERAESLDESEAIKAKEIAEQELANKDTSIDYAKASAQL 121


>gi|376403715|ref|YP_005090076.1| atpE gene product (chloroplast) [Fucus vesiculosus]
 gi|269991278|emb|CAX12458.1| ATP synthase CF1 epsilon chain [Fucus vesiculosus]
          Length = 131

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIA 147
           D VI+P+ TGQ+G+L GH P I  L+ G+L +          V  GFA I  + V  I+ 
Sbjct: 20  DEVILPSLTGQLGLLKGHAPLITALEIGILRIKVNLSWTPIIVLGGFAVIKNDEV--IVL 77

Query: 148 VEAV-PIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           +  V  +++ D S  ++ LA+  + L  A T  EK +A
Sbjct: 78  ISGVEKMEKQDYSEAKELLAKATKNLDLAKTTKEKIDA 115


>gi|296117270|ref|ZP_06835861.1| ATP synthase epsilon chain [Gluconacetobacter hansenii ATCC 23769]
 gi|295976163|gb|EFG82950.1| ATP synthase epsilon chain [Gluconacetobacter hansenii ATCC 23769]
          Length = 141

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 11/74 (14%)

Query: 88  DMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFI--------- 137
           DMV++P S G +  +P H P +  L+ GV+ +++G+    ++FVS GFA +         
Sbjct: 20  DMVVMPGSEGDIAAMPEHAPLMLMLRGGVVEIYEGDAIAHRFFVSGGFADMTPDHCTILA 79

Query: 138 -HANSVADIIAVEA 150
            HA  VAD+ A +A
Sbjct: 80  DHATPVADLSATDA 93


>gi|209515775|ref|ZP_03264638.1| ATP synthase F1, epsilon subunit [Burkholderia sp. H160]
 gi|295678132|ref|YP_003606656.1| ATP synthase F1 subunit epsilon [Burkholderia sp. CCGE1002]
 gi|209503802|gb|EEA03795.1| ATP synthase F1, epsilon subunit [Burkholderia sp. H160]
 gi|295437975|gb|ADG17145.1| ATP synthase F1, epsilon subunit [Burkholderia sp. CCGE1002]
          Length = 141

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 2/112 (1%)

Query: 75  VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSG 133
           V+    E+ + +   V +P   G++G+LPGH P I  ++PG + +   N  +++ FV+ G
Sbjct: 8   VVSAEEEIFSGQAKFVALPGEAGELGILPGHTPLITRIRPGAVRIEVENGEEEFVFVAGG 67

Query: 134 FAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
              +   +V  ++A  A+    +D +  +       + L +  ++LE A AQ
Sbjct: 68  ILEVQPGAVT-VLADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQ 118


>gi|11497534|ref|NP_054942.1| ATP synthase CF1 epsilon subunit [Spinacia oleracea]
 gi|114606|sp|P00833.1|ATPE_SPIOL RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|343356|gb|AAA84627.1| ATPase epsilon subunit [Spinacia oleracea]
 gi|7636115|emb|CAB88735.1| ATP synthase epsilon subunit [Spinacia oleracea]
          Length = 134

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 70  LTVNF-VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           +T+N  VL     +   EV  +I+  ++GQ+GVLP H PT   +  G+L +   +     
Sbjct: 1   MTLNLCVLTPNRSIWNSEVKEIILSTNSGQIGVLPNHAPTATAVDIGILRIRLNDQWLTL 60

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
            +  GFA I  N +  I+  +A     IDP        E  Q L  A  +L KAE +
Sbjct: 61  ALMGGFARIGNNEIT-ILVNDAERGSDIDPQ-------EAQQTLEIAEANLRKAEGK 109


>gi|305672511|gb|ADM63632.1| ATP synthase CF1 epsilon subunit [Tragopogon porrifolius]
          Length = 129

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV  +I+  ++GQ+GVLP H P    +  G+L +   +      +  GFA I  N +  +
Sbjct: 14  EVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEIT-V 72

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           +  +A   D IDP        E  Q L  A T L KAE +
Sbjct: 73  LVNDAEKSDDIDPE-------EAKQTLEIAETALRKAEGK 105


>gi|428781583|ref|YP_007173369.1| ATP synthase F1 subunit epsilon [Dactylococcopsis salina PCC 8305]
 gi|428695862|gb|AFZ52012.1| ATP synthase, F1 epsilon subunit [Dactylococcopsis salina PCC 8305]
          Length = 138

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)

Query: 90  VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
           V++P++TGQ+G+L GH P ++ L  GV+ +    D     V+ GFA +  N V  I+   
Sbjct: 22  VVLPSTTGQLGILSGHAPLLSALDIGVMRLRPQKDWLSIAVAGGFAEVEENQVT-ILVNS 80

Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
           A   D I+    ++   E       A T LEKA+ 
Sbjct: 81  AERGDNINSEKARETYEE-------AKTRLEKAQG 108


>gi|308234026|ref|ZP_07664763.1| ATP synthase F1 subcomplex epsilon subunit [Atopobium vaginae DSM
           15829]
 gi|328944380|ref|ZP_08241842.1| ATP synthase F1 sector epsilon subunit [Atopobium vaginae DSM
           15829]
 gi|327490964|gb|EGF22741.1| ATP synthase F1 sector epsilon subunit [Atopobium vaginae DSM
           15829]
          Length = 141

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 10/120 (8%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH----DGN 123
           ++LT  FV P    +    V  +I+    G++GV PGH   I  L  GV+ +H    DG 
Sbjct: 2   AELTCQFVRP-DKLIYEGLVKSLILVTKNGELGVWPGHANEICSLGDGVVRLHHLDEDGG 60

Query: 124 DTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
            T    VS G+A I  + V  I+A  A   + IDP +V     E  QK   A  +L+ ++
Sbjct: 61  GTDNVVVSGGYAEIGPDGVI-ILADHARLANDIDPDVV----TETRQKALDALENLDDSD 115


>gi|189220435|ref|YP_001941075.1| F0F1-type ATP synthase subunit epsilon [Methylacidiphilum
           infernorum V4]
 gi|189187293|gb|ACD84478.1| F0F1-type ATP synthase, epsilon subunit [Methylacidiphilum
           infernorum V4]
          Length = 145

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
           +T+  V P     S +EV+ V +P   G+MGV P H P I ++ PG LS +  N  KKY+
Sbjct: 3   MTLQLVTPDGVTFS-EEVEQVTLPGVDGEMGVYPNHEPLITQIVPGELS-YTKNGGKKYY 60

Query: 130 --VSSGFAFIHANSVADII 146
             +  GF  I A +V+ ++
Sbjct: 61  LAIGEGFVKITAKNVSVLV 79


>gi|418295042|ref|ZP_12906916.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri ATCC 14405
           = CCUG 16156]
 gi|379066399|gb|EHY79142.1| F0F1 ATP synthase subunit epsilon [Pseudomonas stutzeri ATCC 14405
           = CCUG 16156]
          Length = 142

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 80  SELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG-VLSVHDGNDTKKYFVSSGFAFIH 138
            EL +  V+MVI   + G +G+LPGH P + +LKPG V  +  G   + +++S GF  + 
Sbjct: 14  GELFSGLVEMVIAHGNLGDIGILPGHAPLLTDLKPGPVRVIKQGGGEEIFYISGGFIEVQ 73

Query: 139 ANSV 142
            N V
Sbjct: 74  PNMV 77


>gi|406964938|gb|EKD90632.1| ATP synthase F1, epsilon subunit [uncultured bacterium]
          Length = 136

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 11/130 (8%)

Query: 68  SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
           S+L +  V P  SE+  + VD V      G++G+LP H+  + +L PG L +  GN    
Sbjct: 2   SQLNLKIVTP-DSEIFNETVDAVNAFTEQGEIGILPNHINLMTKLTPGELKIKKGNKLTY 60

Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD--------- 178
                GF  +  N+V  I+   AV  D I+   V++      Q L    +D         
Sbjct: 61  MATGDGFLQVSDNTVT-IMTDMAVDEDLINEKAVEEAKKRAQQALEQKLSDEEYAQTLSV 119

Query: 179 LEKAEAQIGV 188
           LEK+ AQ+ V
Sbjct: 120 LEKSLAQLKV 129


>gi|11467033|ref|NP_041940.1| ATP synthase CF1 epsilon subunit [Euglena gracilis]
 gi|399083|sp|P31477.1|ATPE_EUGGR RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName:
           Full=ATP synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|415783|emb|CAA50127.1| ATP Synthase, epsilon subunit [Euglena gracilis]
          Length = 135

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 12/115 (10%)

Query: 85  KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD--GNDTKKYFVSSGFAFIHANSV 142
           K V+ +I+P  +GQMGVL  H+P +  L  G++ V     +D     V+ GFA I++N+V
Sbjct: 17  KRVEEIILPTLSGQMGVLKDHIPILTGLDIGIILVRQKSSSDWTSLVVTGGFALINSNNV 76

Query: 143 ADIIAVEAVPIDQIDPSLVQ------KGLAEFNQKLSSA---TTDLEKAEAQIGV 188
             I+  EA    +I+    Q      K   E N+ +      T +L+KA A+  V
Sbjct: 77  T-ILVNEAEFGSEINVEQAQISYNSSKHALEMNKDIKRKFELTLNLKKARARFQV 130


>gi|171462854|ref|YP_001796967.1| F0F1 ATP synthase subunit epsilon [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|226740272|sp|B1XSD5.1|ATPE_POLNS RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|171192392|gb|ACB43353.1| ATP synthase F1, epsilon subunit [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 138

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           E   V +P  +G++G+L GH P I  ++PG + +   +D +++ FV+ G+  I ++ V  
Sbjct: 19  EAKFVALPGESGELGILRGHTPLITRIRPGSVRIEKADDDEEFVFVAGGYLEIQSDHVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++A  A+    +D +   +      + + +  TD + A AQ
Sbjct: 78  VLADTAIRGHDLDEAKAIEAKKRAEEAMQNRGTDFDLALAQ 118


>gi|385207669|ref|ZP_10034537.1| ATP synthase, F1 epsilon subunit [Burkholderia sp. Ch1-1]
 gi|385180007|gb|EIF29283.1| ATP synthase, F1 epsilon subunit [Burkholderia sp. Ch1-1]
          Length = 141

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           +   V +P   G++G+LPGH P I  ++PG + +   N  +++ FV+ G   I   +V  
Sbjct: 19  QAKFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEIQPGAVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++A  A+    +D +  +       + L +  ++LE A AQ
Sbjct: 78  VLADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQ 118


>gi|170694321|ref|ZP_02885475.1| ATP synthase F1, epsilon subunit [Burkholderia graminis C4D1M]
 gi|170140744|gb|EDT08918.1| ATP synthase F1, epsilon subunit [Burkholderia graminis C4D1M]
          Length = 141

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFIHANSVAD 144
           +   V +P   G++G+LPGH P I  ++PG + +   N  +++ FV+ G   I   +V  
Sbjct: 19  QAKFVALPGEAGELGILPGHTPLITRIRPGAVRIEAENGEEEFVFVAGGILEIQPGAVT- 77

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
           ++A  A+    +D +  +       + L +  ++LE A AQ
Sbjct: 78  VLADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQ 118


>gi|348589508|ref|YP_004873970.1| ATP synthase subunit epsilon [Taylorella asinigenitalis MCE3]
 gi|347973412|gb|AEP35947.1| ATP synthase epsilon chain [Taylorella asinigenitalis MCE3]
 gi|399116711|emb|CCG19519.1| ATP synthase epsilon chain [Taylorella asinigenitalis 14/45]
          Length = 142

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 7/79 (8%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVADII 146
           MV++P  TG++GVLPGH P I+ +KPG + +   DG++ +  FV+ G   +   +V  ++
Sbjct: 24  MVVLPGVTGELGVLPGHTPLISRVKPGRVKITREDGSE-ETLFVAGGLLEVQPFAVT-VL 81

Query: 147 AVEAVPIDQIDPSLVQKGL 165
           A   V ++ +D    QK L
Sbjct: 82  ADTVVRMEDLDE---QKAL 97


>gi|309322171|ref|YP_003934086.1| ATP synthase CF1 epsilon subunit [Geranium palmatum]
 gi|197132362|gb|ACH47699.1| ATP synthase CF1 epsilon subunit [Geranium palmatum]
 gi|300069264|gb|ADJ66385.1| ATP synthase CF1 epsilon subunit [Geranium palmatum]
          Length = 132

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 12/134 (8%)

Query: 70  LTVNF-VLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
           +T+N  VL     L   EV  +I+   +GQ+GVLP HVP +  L  G+L +   +     
Sbjct: 1   MTLNLCVLTPKRILWDSEVKEIILSTDSGQIGVLPNHVPIVTGLDTGILRIRLNDQWFTM 60

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ--- 185
            +  GFA I  N +  I A +A     IDP        E  Q L  A     KA+A+   
Sbjct: 61  VLMGGFARIANNEII-IFAHDAEKGSDIDPQ-------EAQQTLQIAEDGFRKAKAEGKG 112

Query: 186 IGVDVHSALNSALT 199
             ++V  AL  A T
Sbjct: 113 QTIEVKQALTRAQT 126


>gi|89070091|ref|ZP_01157421.1| ATP synthase F1, epsilon subunit [Oceanicola granulosus HTCC2516]
 gi|89044312|gb|EAR50455.1| ATP synthase F1, epsilon subunit [Oceanicola granulosus HTCC2516]
          Length = 145

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 70  LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVL-SVHDGNDTKKY 128
            T + V P    L+  EV  V +P + G M  +  H PTI  L+PG+L +VH G  T +Y
Sbjct: 5   FTFDLVSP-ERRLAQLEVTEVQIPGADGDMTAMASHAPTITTLRPGILRAVHAGG-TDEY 62

Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
            V  GFA I  + V  ++A +A+P  ++   +  + + E  Q  S A
Sbjct: 63  VVVGGFAEIGESGVT-VLAEQALPRAEMSQEVYDRLVEEAAQAHSRA 108


>gi|260437516|ref|ZP_05791332.1| ATP synthase F1, epsilon subunit [Butyrivibrio crossotus DSM 2876]
 gi|292810149|gb|EFF69354.1| ATP synthase F1, epsilon subunit [Butyrivibrio crossotus DSM 2876]
          Length = 133

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 86  EVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADI 145
           EV M     + G +GV P H+P    L PGVL +H+    KK  + SGFA I  + ++  
Sbjct: 21  EVTMAEFNTTEGYIGVYPEHIPLAVILSPGVLVIHEPGGEKKAALHSGFAKIMKDKISIF 80

Query: 146 IAVEAVPIDQIDPSLVQKGLAEFNQKLSS--ATTDLEKAE 183
             +   P D+ID +  ++      +++S   +  DL++AE
Sbjct: 81  AEIAEWP-DEIDENRAREAKIRAERRISGDKSGIDLQRAE 119


>gi|73543027|ref|YP_297547.1| F0F1 ATP synthase subunit epsilon [Ralstonia eutropha JMP134]
 gi|119367765|sp|Q46VY1.1|ATPE_RALEJ RecName: Full=ATP synthase epsilon chain; AltName: Full=ATP
           synthase F1 sector epsilon subunit; AltName:
           Full=F-ATPase epsilon subunit
 gi|72120440|gb|AAZ62703.1| ATP synthase F1 subcomplex epsilon subunit [Ralstonia eutropha
           JMP134]
          Length = 138

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY-FVSSGFAFI---HANSVAD 144
            V +P  +G++G+LPGH P I  ++PG + +   + ++++ FV+ G   +   H   +AD
Sbjct: 22  FVALPGESGELGILPGHTPLITRIQPGAVRIEKEDGSEEFVFVAGGILEVQPQHVTVLAD 81

Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
             A+    +D+      ++   E  Q  SS   DL+ A AQ
Sbjct: 82  -TAIRGTDLDEAKAQEAKRAAEELMQNQSS---DLDIARAQ 118


>gi|319778926|ref|YP_004129839.1| ATP synthase subunit epsilon [Taylorella equigenitalis MCE9]
 gi|317108950|gb|ADU91696.1| ATP synthase epsilon chain [Taylorella equigenitalis MCE9]
 gi|399115639|emb|CCG18442.1| ATP synthase epsilon chain [Taylorella equigenitalis 14/56]
          Length = 142

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 7/79 (8%)

Query: 89  MVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKKYFVSSGFAFIHANSVADII 146
           MV++P  TG++GVLPGH P I+ +KPG + +   DG++ +  FV+ G   +   +V  ++
Sbjct: 24  MVVLPGVTGEIGVLPGHTPLISRIKPGRVKITREDGSE-ETLFVAGGLLEVQPFAVT-VL 81

Query: 147 AVEAVPIDQIDPSLVQKGL 165
           A   V ++ +D    QK L
Sbjct: 82  ADTVVRMEDLDE---QKAL 97


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.127    0.355 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,996,489,385
Number of Sequences: 23463169
Number of extensions: 123125047
Number of successful extensions: 358078
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2634
Number of HSP's successfully gapped in prelim test: 847
Number of HSP's that attempted gapping in prelim test: 354977
Number of HSP's gapped (non-prelim): 3510
length of query: 200
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 65
effective length of database: 9,191,667,552
effective search space: 597458390880
effective search space used: 597458390880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 73 (32.7 bits)