BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029006
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40089|ATP4_IPOBA ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1
SV=1
Length = 200
Score = 325 bits (833), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/200 (77%), Positives = 178/200 (89%)
Query: 1 MFRQASRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRP 60
MFR +SRLLARA+ + R FS+ +PA A DSTFVE+WKK+ PN++PPKTPS YM PRP
Sbjct: 1 MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60
Query: 61 QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH 120
TP+SIPSKLTVNFVLPY+SEL+ KEVDMVI+PA+TGQMGVLPGHV TIAELKPGV+SVH
Sbjct: 61 ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120
Query: 121 DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLE 180
+GND KYFVS GFAFIHANS ADIIAVEAVP+D+ID +LVQKGLAEF QKL++A+TD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180
Query: 181 KAEAQIGVDVHSALNSALTG 200
KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200
>sp|Q96252|ATP4_ARATH ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana
GN=At5g47030 PE=1 SV=1
Length = 203
Score = 324 bits (831), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 182/205 (88%), Gaps = 7/205 (3%)
Query: 1 MFRQASRLLARASAVTRS-----RAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVY 55
MF+QASRLL+R+ A S RAFS+++P+ +DSTFVE+WKKV PNM+PP+TPS +
Sbjct: 1 MFKQASRLLSRSVAAASSKSVTTRAFSTELPST--LDSTFVEAWKKVAPNMDPPQTPSAF 58
Query: 56 MTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPG 115
M PRP TP+SIP+KLTVNFVLPY SEL+ KEVDMVI+PASTGQMGVLPGHVPTIAELKPG
Sbjct: 59 MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 118
Query: 116 VLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSA 175
++SVH+G D KKYF+SSGFAF+HANSVADIIAVEAVP+D IDPS VQKGLAEF QKL+SA
Sbjct: 119 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 178
Query: 176 TTDLEKAEAQIGVDVHSALNSALTG 200
TTDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 179 TTDLEKAEAQIGVEVHSAINAALSG 203
>sp|Q41000|ATP4_PEA ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3
SV=1
Length = 197
Score = 288 bits (737), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/201 (71%), Positives = 172/201 (85%), Gaps = 5/201 (2%)
Query: 1 MFRQA-SRLLARASAVTRSRAFSSQVPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPR 59
MFR+A S L+RASA +R FS+ V A PA +S+FVE+W+KV+PN++PPKTP ++ R
Sbjct: 1 MFRRATSTFLSRASA---TRRFSTDV-ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTR 56
Query: 60 PQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV 119
P P++IP+KLTVNFVLPY+S+L+AKEVD VI+PA+TG+MGVLPGHV TIAELKPGVL+V
Sbjct: 57 PPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTV 116
Query: 120 HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDL 179
+G DT KYFVSSGF FIHANSVADIIAVEAVP++Q+D LVQKGL EF QKL+SATTDL
Sbjct: 117 QEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL 176
Query: 180 EKAEAQIGVDVHSALNSALTG 200
EK EAQIG+DV SALNSALTG
Sbjct: 177 EKREAQIGIDVDSALNSALTG 197
>sp|Q55F42|ATPD_DICDI ATP synthase subunit delta, mitochondrial OS=Dictyostelium
discoideum GN=atp5D PE=3 SV=1
Length = 170
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKY 128
LT + + P+ + K+ +V +P + G GV HVP IAELKPGV+ + H+ D +K+
Sbjct: 37 LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKF 96
Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGV 188
F+S GFAF++ ++ I +EAVPIDQ+D V+ GLA + Q + A + KA A IG+
Sbjct: 97 FISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGL 156
Query: 189 DVHSAL 194
+ + +
Sbjct: 157 ETYQQM 162
>sp|Q92196|ATPD_AGABI ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus
GN=atpD PE=2 SV=1
Length = 162
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 82/133 (61%)
Query: 66 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
I KL ++ LP+ + S+++V V +PA +G MG+L HVP+I L+PGV+ V + + +
Sbjct: 28 ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGS 87
Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
+K+FVS GFA +H N+ I VEA P++ ++ L E N+ + + ++ +K EAQ
Sbjct: 88 QKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQ 147
Query: 186 IGVDVHSALNSAL 198
I +V+ AL AL
Sbjct: 148 IEAEVYEALQHAL 160
>sp|Q757N0|ATPD_ASHGO ATP synthase subunit delta, mitochondrial OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=ATP16 PE=3 SV=1
Length = 158
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
L +NF LP+ + + V V +P TGQ+G+L HVP + +L PGV+ V +G+++KK+F
Sbjct: 30 LKLNFALPHETLFAGTAVKQVNLPVKTGQIGILANHVPIVEQLVPGVVEVLEGSESKKFF 89
Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
VS GFA + +S I +VEA P+D V+ LAE QK + A AEA I ++
Sbjct: 90 VSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAE-AQKNAGAADSRVAAEASIQIE 148
Query: 190 VHSALNSAL 198
V AL +AL
Sbjct: 149 VLEALQAAL 157
>sp|Q12165|ATPD_YEAST ATP synthase subunit delta, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ATP16 PE=1
SV=1
Length = 160
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
L + F LP+ + S EV V +PA +G++GVL HVPT+ +L PGV+ V +G+++KK+F
Sbjct: 32 LKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFF 91
Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
+S GFA + +S + A+EA P++ ++ LAE + +SS+ E AEA I V+
Sbjct: 92 ISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDAR-EAAEAAIQVE 150
Query: 190 VHSALNSAL 198
V L S L
Sbjct: 151 VLENLQSVL 159
>sp|P78700|ATPD_KLULA ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ATP16 PE=3 SV=2
Length = 159
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
L + F LP+ + S V V +PA +GQ+G+L HVPT+ +L PGV+ V +G+ +KK+F
Sbjct: 31 LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFF 90
Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVD 189
VS GFA + +S I +VEA P++ P V+ LAE + +SSA AEA I ++
Sbjct: 91 VSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSADEV-AAAEAAIQLE 149
Query: 190 VHSALNSAL 198
V AL +AL
Sbjct: 150 VLEALQAAL 158
>sp|P56525|ATPD_NEUCR ATP synthase subunit delta, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=atp-16 PE=3 SV=2
Length = 165
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 59 RPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLS 118
R ++ K+ ++ LP+ + +++V V +PA +G+MGVL HVP+I +LKPG++
Sbjct: 24 RRGYAEAVADKIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVE 83
Query: 119 V-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATT 177
V + K+YF+S GFA + S I AVE ++ V+ +AE + +S +
Sbjct: 84 VIEESGSNKQYFLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAEAQKIVSGGGS 143
Query: 178 DLEKAEAQIGVDVHSALNSAL 198
+ AEAQ+ ++V +L + L
Sbjct: 144 QQDIAEAQVELEVLESLQAVL 164
>sp|Q9D3D9|ATPD_MOUSE ATP synthase subunit delta, mitochondrial OS=Mus musculus GN=Atp5d
PE=1 SV=1
Length = 168
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 69 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTK 126
+++ F P + V V VP TG G+L HVPT+ L+PG++ VH DG T
Sbjct: 37 QMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGT-TT 95
Query: 127 KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQI 186
KYFVSSG ++A+S ++A EAV +D +D + L + +LS A + +AE QI
Sbjct: 96 KYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQI 155
Query: 187 GVDVHSALNSAL 198
++ + AL AL
Sbjct: 156 RIEANEALVKAL 167
>sp|P05630|ATPD_BOVIN ATP synthase subunit delta, mitochondrial OS=Bos taurus GN=ATP5D
PE=1 SV=2
Length = 168
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDTKK 127
++ F P ++ V V VP TG G+L HVPT+ L+PG++ VH DG T K
Sbjct: 38 MSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGT-TSK 96
Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
YFVSSG ++A+S ++A EAV +D +D + L + +L A + +AE QI
Sbjct: 97 YFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIR 156
Query: 188 VDVHSALNSAL 198
++ + AL AL
Sbjct: 157 IEANEALVKAL 167
>sp|P30049|ATPD_HUMAN ATP synthase subunit delta, mitochondrial OS=Homo sapiens GN=ATP5D
PE=1 SV=2
Length = 168
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 65 SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DG 122
S P++++ F P + V V VP TG G+L HVPT+ L+PG++ VH DG
Sbjct: 33 SGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDG 92
Query: 123 NDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
T KYFVSSG ++A+S ++A EAV +D +D + L + +L + +A
Sbjct: 93 T-TSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRA 151
Query: 183 EAQIGVDVHSALNSAL 198
E QI ++ + AL AL
Sbjct: 152 EIQIRIEANEALVKAL 167
>sp|P35434|ATPD_RAT ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus
GN=Atp5d PE=1 SV=2
Length = 168
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 68 SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH--DGNDT 125
+++ F P V V VP TG G+L HVPT+ L+PG++ VH DG T
Sbjct: 36 GQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGT-T 94
Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQ 185
KYFVSSG ++A+S ++A E V +D +D + L + +LS A + +AE Q
Sbjct: 95 TKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQ 154
Query: 186 IGVDVHSALNSAL 198
I ++ + AL AL
Sbjct: 155 IRIEANEALVKAL 167
>sp|Q09544|ATPD_CAEEL ATP synthase subunit delta, mitochondrial OS=Caenorhabditis elegans
GN=F58F12.1 PE=1 SV=1
Length = 163
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 69 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KK 127
+L + F P + S V V VP G +GVL HVPTI LKPGV+SV T ++
Sbjct: 30 ELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEGTVQR 89
Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
FVSSG ++ + ++A E + +++ID S + L + Q+ S +++ +AEAQI
Sbjct: 90 LFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAEL-DAAQRASGEGSEVARAEAQIR 148
Query: 188 VDVHSALNSALT 199
+V AL A T
Sbjct: 149 AEVAEALIKAAT 160
>sp|Q9P6R6|ATPD_SCHPO ATP synthase subunit delta, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=atp16 PE=3 SV=2
Length = 167
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 69 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-K 127
KL ++ LPY + V V +PA G+MG+L HVP I LKPGV+SV D + K K
Sbjct: 37 KLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSK 96
Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIG 187
YF+S GFA ++ I EA ++ S+ + L + +++S+ + AEA +
Sbjct: 97 YFISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNSSDEGV-AAEAAVR 155
Query: 188 VDVHSALNSAL 198
V V +L AL
Sbjct: 156 VSVLESLVRAL 166
>sp|Q20EW9|ATPE_OLTVI ATP synthase epsilon chain, chloroplastic OS=Oltmannsiellopsis
viridis GN=atpE PE=3 SV=1
Length = 131
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 85 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
KEVD +I+P +TGQMGVL H P I L GV+ V D + V GFA + N +
Sbjct: 17 KEVDEIILPTNTGQMGVLSNHAPLITALDIGVMLVRTQKDWESVAVMGGFALVKQNQIT- 75
Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
++ EA + IDP ++ A Q L AT EK EA
Sbjct: 76 VLVNEAESKETIDPQEAEEAFATAKQTLEQATGQKEKVEA 115
>sp|B6IPC5|ATPE_RHOCS ATP synthase epsilon chain OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=atpC PE=3 SV=1
Length = 146
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 66 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
+ KL V P L ++ V MV+VP + G GVLPGH P I ++PG++ V+ N T
Sbjct: 1 MADKLEFELVSPEKL-LVSQPVAMVVVPGADGLFGVLPGHAPMIVTVRPGIIDVYGDNQT 59
Query: 126 ---KKYFVSSGFAFIHANSVADIIAVEAVPIDQI---DPSLVQKGLAEFNQKLSSATTDL 179
++ FV+ GFA + ++ ++A EA +D + D + ++K +++ + + AT+D+
Sbjct: 60 TVSRRIFVAGGFAEV-TDTRCTVLAEEASDLDALLKSDTAALEKQISDLREDIEDATSDV 118
Query: 180 EK 181
E+
Sbjct: 119 ER 120
>sp|Q2VZN3|ATPE_MAGSA ATP synthase epsilon chain OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpC PE=3 SV=1
Length = 133
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 66 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND- 124
+ K+ V P A L + +VDMV+VP + G G L H P I ++PGV+ +HDG
Sbjct: 1 MAEKIQFELVSP-AKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKV 59
Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
+ FV+ GFA ++ + ++A EA+P+ ++ + + + L A +D +KA A
Sbjct: 60 SSSVFVAGGFAEVNEERIT-VLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHA 118
>sp|Q0AKW2|ATPE_MARMM ATP synthase epsilon chain OS=Maricaulis maris (strain MCS10)
GN=atpC PE=3 SV=1
Length = 133
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 66 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
+ KL + V P L A VD V+VP G GVLP H P ++ ++PG ++V D
Sbjct: 1 MADKLHFDLVSPE-RRLFAGNVDQVVVPGEEGDFGVLPNHAPFMSVIRPGAITVIDDGKE 59
Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
+ F+ GFA + A + I+A EA+ + ID + + L++ + +++A + E+ +A
Sbjct: 60 TRTFIHGGFAEVTAAGLT-ILAEEAIAVADIDTEKLARDLSDAREDVTAAKDEEERDQA 117
>sp|P05441|ATPE_RHOBL ATP synthase epsilon chain OS=Rhodopseudomonas blastica GN=atpC
PE=3 SV=1
Length = 130
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 66 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT 125
+ + L + V P L++ + V +P + G M + GH PTI L+PG+L T
Sbjct: 1 MAATLQFDLVSPE-RRLASVQATEVQIPGAAGDMTAMQGHAPTITTLRPGILRAVSAEGT 59
Query: 126 KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
K Y V+ GFA I A V+ ++A AVP+D++D L+ + +A+ + SS D + AE
Sbjct: 60 KAYVVTGGFAEISATGVS-VLAERAVPLDEMDAKLMDQLVADASAA-SSVGVDKDTAE 115
>sp|B9E8E5|ATPE_MACCJ ATP synthase epsilon chain OS=Macrococcus caseolyticus (strain
JCSC5402) GN=atpC PE=3 SV=1
Length = 136
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 68 SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHD-GNDTK 126
+KL + V P S S E +++++ +G+MGV+ GH+PT+A LK G + V GND
Sbjct: 2 NKLAIEIVTPNGSIYSETEAELIVLQTESGEMGVMAGHIPTVAPLKIGAVRVTKPGNDKD 61
Query: 127 KYFVSSGFAFIHANSVADII----AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKA 182
V+ GFA I V+ ++ E + I++ SL ++ A N+ +A D +A
Sbjct: 62 YIAVTEGFAEIRPQQVSVLVQAAEQAEGIDIERAKESL-KRAEARLNED-KAAHVDFHRA 119
Query: 183 EAQIGVDVHSALN 195
E + H A+N
Sbjct: 120 ERAL----HRAIN 128
>sp|B2KEX4|ATPE_ELUMP ATP synthase epsilon chain OS=Elusimicrobium minutum (strain
Pei191) GN=atpC PE=3 SV=1
Length = 135
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 69 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKY 128
KLT +F+ P + +E D V +PA G+MGVLPGHV ++ L PG + + + K++
Sbjct: 3 KLTFSFISPERPIVQNQEADFVALPAFEGEMGVLPGHVNSVVILMPGFVRFKNNGEEKEF 62
Query: 129 FVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSS--ATTDLEKAEAQI 186
+ GFA + + + D+ A EA ++ ++ L + LSS A D+E AE Q+
Sbjct: 63 AIIDGFAEVFKDHI-DVFASEASLSEEKQSEEQKQRLERAKKALSSQDADIDIELAEIQL 121
Query: 187 GVDV 190
+
Sbjct: 122 KTQI 125
>sp|Q1CX38|ATPE_MYXXD ATP synthase epsilon chain OS=Myxococcus xanthus (strain DK 1622)
GN=atpC PE=3 SV=1
Length = 136
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 68 SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKK 127
+KLTV V P LS + D IVP G GV PGH P ++ ++PG L++ + +
Sbjct: 2 AKLTVEIVTPEKRILSVQ-ADEAIVPGGRGLFGVRPGHTPFLSLMEPGALTLIESGRRES 60
Query: 128 YFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTD 178
YFV+ GF + + V ++A A P+ ID ++ +AE +++ +++
Sbjct: 61 YFVAGGFVEVGNDKVL-VLADAAEPVTGIDVEGARRRMAEAQERMKGMSSE 110
>sp|Q0BQE9|ATPE_GRABC ATP synthase epsilon chain OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=atpC PE=3 SV=1
Length = 135
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 82 LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHAN 140
L ++ VDMV++PA+ G++GVLPGH P I L+ G + ++ +G T + +V+ GFA I
Sbjct: 15 LLSRSVDMVVIPAAEGELGVLPGHAPMIVLLQGGTIRLYQNGQVTDRLYVAGGFAEITPE 74
Query: 141 SVADIIAVEAVPIDQIDPSLVQKGLAE 167
++A +A P+ +I + +K LA+
Sbjct: 75 RCT-VLADQARPVAEISATEAEKRLAD 100
>sp|O78492|ATPE_GUITH ATP synthase epsilon chain, chloroplastic OS=Guillardia theta
GN=atpE PE=3 SV=1
Length = 131
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 90 VIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVE 149
VI+P+STGQ+G+L GH P + L GV+ V D + GFA I + + I+
Sbjct: 22 VILPSSTGQLGILKGHAPLLTALDIGVMRVRVDRDWTPIVLLGGFAEIENDELT-ILVNG 80
Query: 150 AVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
A QID Q+ L E K + ATT+ E+ EA
Sbjct: 81 AEEASQIDRDQAQRDLEEMTVKFNEATTNKERIEA 115
>sp|A4J998|ATPE_DESRM ATP synthase epsilon chain OS=Desulfotomaculum reducens (strain
MI-1) GN=atpC PE=3 SV=1
Length = 132
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 84 AKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVA 143
++E+D V+ P + G++G+LP H P + LK G L V G K VS GF + NS
Sbjct: 18 SEEIDFVVAPGADGELGILPEHAPLVTALKVGTLRVQQGGKFFKVAVSGGFMEVK-NSRI 76
Query: 144 DIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEAQIGVDVHSALN 195
++A A DQID + Q+L+S ++++ A+I +H A+N
Sbjct: 77 VVLADTAERADQIDVERAKAAKQRAEQRLNSKGSEIDVHRAEIA--LHKAIN 126
>sp|A7HT53|ATPE_PARL1 ATP synthase epsilon chain OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=atpC PE=3 SV=1
Length = 132
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 66 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGND 124
+ KL + V P S +VDMV++P S G MG++ GH P ++ L+PG++ V ++G
Sbjct: 1 MAEKLNFDLVSPERLLFSG-QVDMVVIPGSEGDMGIMAGHAPVMSTLRPGIIEVENEGAP 59
Query: 125 TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
++ FV GFA + + ++A VP+ +D + + + +A ++ ++ A D ++ A
Sbjct: 60 RQRIFVRGGFAEVTPAGLT-VLAEFTVPLADLDATALDREIALADKDVADAKNDDKRQSA 118
>sp|A7GV55|ATPE_BACCN ATP synthase epsilon chain OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=atpC PE=3 SV=1
Length = 133
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 85 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
KEV+MV V A +G+MG+LPGH+PT+A LK + + +G T VS GF + + V
Sbjct: 18 KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76
Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
++A A + ID + Q+L A D ++AE
Sbjct: 77 VLATSAEEANHIDTHRANEAKRRAEQRLQDKQAHVDFKRAE 117
>sp|A5GV56|ATPE_SYNR3 ATP synthase epsilon chain OS=Synechococcus sp. (strain RCC307)
GN=atpC PE=3 SV=1
Length = 135
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
LT+ + P + + D VI+P++TGQ+GVLPGHV + L GVL + DGN
Sbjct: 3 LTLRVLCPDQNVFDG-QADEVILPSTTGQLGVLPGHVSLLTALDVGVLRMRDGNQWTAIA 61
Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLS 173
+ GFA + + V+ ++ A P I+ QK L+E Q S
Sbjct: 62 LMGGFAEVDDDEVS-VLVNAAEPASGINAEEAQKQLSEAEQAWS 104
>sp|Q5LNP2|ATPE_RUEPO ATP synthase epsilon chain OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=atpC PE=3 SV=1
Length = 136
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 82 LSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANS 141
L++ +V V +P + G M +P H PTI L+PGVL V T +Y V+ GFA I A+S
Sbjct: 16 LASLQVSAVQIPGADGDMTAMPDHAPTITTLRPGVLKVEGPEGTSEYLVTGGFAQIGADS 75
Query: 142 VADIIAVEAVPIDQIDPSLVQKGLAE 167
++ ++A +A+P+ ++ + + + +AE
Sbjct: 76 LS-VLAEKAIPVTEVTRAHLDELIAE 100
>sp|P63666|ATPE_STAAW ATP synthase epsilon chain OS=Staphylococcus aureus (strain MW2)
GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|A8Z500|ATPE_STAAT ATP synthase epsilon chain OS=Staphylococcus aureus (strain USA300
/ TCH1516) GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|Q6G7K8|ATPE_STAAS ATP synthase epsilon chain OS=Staphylococcus aureus (strain
MSSA476) GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|Q6GEX3|ATPE_STAAR ATP synthase epsilon chain OS=Staphylococcus aureus (strain
MRSA252) GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|P63665|ATPE_STAAN ATP synthase epsilon chain OS=Staphylococcus aureus (strain N315)
GN=atpC PE=1 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|P63664|ATPE_STAAM ATP synthase epsilon chain OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=atpC PE=1 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|A6QIU6|ATPE_STAAE ATP synthase epsilon chain OS=Staphylococcus aureus (strain Newman)
GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|Q5HE98|ATPE_STAAC ATP synthase epsilon chain OS=Staphylococcus aureus (strain COL)
GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|Q2YUK2|ATPE_STAAB ATP synthase epsilon chain OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|A5IUP7|ATPE_STAA9 ATP synthase epsilon chain OS=Staphylococcus aureus (strain JH9)
GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|Q2FWF1|ATPE_STAA8 ATP synthase epsilon chain OS=Staphylococcus aureus (strain NCTC
8325) GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|Q2FF25|ATPE_STAA3 ATP synthase epsilon chain OS=Staphylococcus aureus (strain USA300)
GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|A6U3I7|ATPE_STAA2 ATP synthase epsilon chain OS=Staphylococcus aureus (strain JH1)
GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|A7X4U2|ATPE_STAA1 ATP synthase epsilon chain OS=Staphylococcus aureus (strain Mu3 /
ATCC 700698) GN=atpC PE=3 SV=1
Length = 134
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV--HDGNDTKK 127
L ++ V P S + V++V++ + G++GV+ GH+PT+A LK G + V HDG T+
Sbjct: 4 LNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDG--TEY 61
Query: 128 YFVSSGFAFIHANSVADII--AVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAE 183
VS GF + + V+ I+ A A ID ++ + + K AE + + TD+ +AE
Sbjct: 62 IAVSDGFVEVRKDKVSIIVQTAETAREID-VERAKLAKARAESHLENDDDNTDIHRAE 118
>sp|Q1XDM7|ATPE_PORYE ATP synthase epsilon chain, chloroplastic OS=Porphyra yezoensis
GN=atpE PE=3 SV=1
Length = 134
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 70 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYF 129
L + + P + A E +I+P+STGQ+G+L GH P + L GV+ V +
Sbjct: 3 LNIRIIAPDRTVWDA-EAQEIILPSSTGQLGILTGHAPLLTALDIGVMRVRVDKEWMPIV 61
Query: 130 VSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLEKAEA 184
+ GFA I N + I+ A QID S +K L Q LS A+++ EK EA
Sbjct: 62 LLGGFAEIENNQLT-ILVNGAEEASQIDLSEAEKNLDTATQLLSDASSNKEKIEA 115
>sp|Q6HAY1|ATPE_BACHK ATP synthase epsilon chain OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=atpC PE=3 SV=1
Length = 133
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 85 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
KEV+MV V A +G+MG+LPGH+PT+A LK + + +G T VS GF + + V
Sbjct: 18 KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76
Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
+++ A + ID + Q+L A D ++AE
Sbjct: 77 VLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHVDFKRAE 117
>sp|Q630U4|ATPE_BACCZ ATP synthase epsilon chain OS=Bacillus cereus (strain ZK / E33L)
GN=atpC PE=3 SV=1
Length = 133
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 85 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
KEV+MV V A +G+MG+LPGH+PT+A LK + + +G T VS GF + + V
Sbjct: 18 KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76
Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
+++ A + ID + Q+L A D ++AE
Sbjct: 77 VLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHVDFKRAE 117
>sp|Q814W3|ATPE_BACCR ATP synthase epsilon chain OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=atpC PE=3 SV=1
Length = 133
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 85 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
KEV+MV V A +G+MG+LPGH+PT+A LK + + +G T VS GF + + V
Sbjct: 18 KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76
Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
+++ A + ID + Q+L A D ++AE
Sbjct: 77 VLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHVDFKRAE 117
>sp|B9IRT6|ATPE_BACCQ ATP synthase epsilon chain OS=Bacillus cereus (strain Q1) GN=atpC
PE=3 SV=1
Length = 133
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 85 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
KEV+MV V A +G+MG+LPGH+PT+A LK + + +G T VS GF + + V
Sbjct: 18 KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76
Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
+++ A + ID + Q+L A D ++AE
Sbjct: 77 VLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHVDFKRAE 117
>sp|B7HY63|ATPE_BACC7 ATP synthase epsilon chain OS=Bacillus cereus (strain AH187)
GN=atpC PE=3 SV=1
Length = 133
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 85 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVAD 144
KEV+MV V A +G+MG+LPGH+PT+A LK + + +G T VS GF + + V
Sbjct: 18 KEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVT- 76
Query: 145 IIAVEAVPIDQIDPSLVQKGLAEFNQKL--SSATTDLEKAE 183
+++ A + ID + Q+L A D ++AE
Sbjct: 77 VLSSSAEEANHIDIHRANEAKRRAEQRLQDKQAHVDFKRAE 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,209,009
Number of Sequences: 539616
Number of extensions: 2863397
Number of successful extensions: 9358
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 8677
Number of HSP's gapped (non-prelim): 772
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)