Query 029008
Match_columns 200
No_of_seqs 188 out of 1866
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 06:01:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 99.9 1.4E-26 3E-31 181.7 13.3 137 57-193 1-156 (329)
2 PF01073 3Beta_HSD: 3-beta hyd 99.9 1.4E-24 3.1E-29 174.2 13.2 136 60-195 1-162 (280)
3 PRK15181 Vi polysaccharide bio 99.9 7.1E-24 1.5E-28 175.2 14.6 140 54-193 13-179 (348)
4 PLN02572 UDP-sulfoquinovose sy 99.9 6.2E-23 1.3E-27 174.4 15.8 142 52-193 43-242 (442)
5 PLN00198 anthocyanidin reducta 99.9 7.8E-23 1.7E-27 168.2 15.5 140 54-193 7-182 (338)
6 PLN02214 cinnamoyl-CoA reducta 99.9 8.4E-23 1.8E-27 168.5 14.9 140 54-193 8-175 (342)
7 CHL00194 ycf39 Ycf39; Provisio 99.9 7.1E-23 1.5E-27 167.2 14.2 134 57-193 1-135 (317)
8 KOG1502 Flavonol reductase/cin 99.9 1.2E-22 2.7E-27 162.8 13.7 139 55-193 5-178 (327)
9 TIGR01472 gmd GDP-mannose 4,6- 99.9 1.2E-22 2.6E-27 167.5 13.5 137 57-193 1-170 (343)
10 PLN02695 GDP-D-mannose-3',5'-e 99.9 3.3E-22 7.2E-27 166.5 16.2 142 51-193 16-181 (370)
11 PLN02427 UDP-apiose/xylose syn 99.9 1.9E-22 4E-27 168.9 14.6 141 52-193 10-196 (386)
12 PLN02662 cinnamyl-alcohol dehy 99.9 2E-22 4.4E-27 164.4 13.3 139 55-193 3-176 (322)
13 PLN02986 cinnamyl-alcohol dehy 99.9 4.2E-22 9.1E-27 162.8 15.2 139 55-193 4-177 (322)
14 TIGR03589 PseB UDP-N-acetylglu 99.9 3.5E-22 7.6E-27 163.7 14.3 135 55-192 3-148 (324)
15 PLN02653 GDP-mannose 4,6-dehyd 99.9 5E-22 1.1E-26 163.6 14.5 140 54-193 4-176 (340)
16 COG1088 RfbB dTDP-D-glucose 4, 99.9 4E-22 8.7E-27 156.2 12.5 143 57-199 1-172 (340)
17 PRK11908 NAD-dependent epimera 99.9 4.9E-22 1.1E-26 164.1 13.8 137 56-193 1-163 (347)
18 PLN02650 dihydroflavonol-4-red 99.9 8.8E-22 1.9E-26 162.8 15.3 139 55-193 4-177 (351)
19 PLN02896 cinnamyl-alcohol dehy 99.9 8.5E-22 1.8E-26 163.1 13.8 140 54-193 8-190 (353)
20 PRK09987 dTDP-4-dehydrorhamnos 99.9 6.6E-22 1.4E-26 160.3 12.6 127 57-197 1-146 (299)
21 COG4221 Short-chain alcohol de 99.9 7.4E-22 1.6E-26 151.6 11.4 138 55-192 5-166 (246)
22 PLN02989 cinnamyl-alcohol dehy 99.9 2E-21 4.4E-26 158.9 14.7 139 55-193 4-178 (325)
23 TIGR02622 CDP_4_6_dhtase CDP-g 99.9 2.2E-21 4.7E-26 160.4 14.6 139 55-193 3-166 (349)
24 KOG1371 UDP-glucose 4-epimeras 99.9 2E-21 4.3E-26 154.1 13.6 138 56-193 2-167 (343)
25 PRK08125 bifunctional UDP-gluc 99.9 1.9E-21 4.1E-26 172.8 14.3 139 54-193 313-477 (660)
26 COG0451 WcaG Nucleoside-diphos 99.9 3.2E-21 6.8E-26 156.4 14.3 135 58-194 2-157 (314)
27 PRK10217 dTDP-glucose 4,6-dehy 99.9 3.6E-21 7.8E-26 159.2 14.2 138 56-193 1-174 (355)
28 COG1086 Predicted nucleoside-d 99.9 1.9E-21 4.2E-26 164.1 11.6 138 54-194 248-401 (588)
29 TIGR03466 HpnA hopanoid-associ 99.9 9.4E-21 2E-25 154.6 14.5 136 57-193 1-155 (328)
30 PLN02240 UDP-glucose 4-epimera 99.9 1E-20 2.2E-25 156.2 14.8 140 54-193 3-170 (352)
31 PRK10675 UDP-galactose-4-epime 99.9 1.2E-20 2.7E-25 154.9 14.7 137 57-193 1-163 (338)
32 PLN02686 cinnamoyl-CoA reducta 99.9 6.5E-21 1.4E-25 158.6 12.9 141 53-193 50-230 (367)
33 PRK06482 short chain dehydroge 99.9 6E-21 1.3E-25 152.7 12.0 138 56-193 2-162 (276)
34 PF02719 Polysacc_synt_2: Poly 99.9 2.4E-21 5.1E-26 154.1 9.4 132 59-193 1-152 (293)
35 COG0300 DltE Short-chain dehyd 99.9 6.7E-21 1.4E-25 149.8 11.5 139 54-192 4-169 (265)
36 KOG1205 Predicted dehydrogenas 99.8 1.3E-20 2.8E-25 149.3 12.4 140 53-192 9-176 (282)
37 PLN02657 3,8-divinyl protochlo 99.8 5.8E-20 1.3E-24 154.0 17.1 138 52-192 56-205 (390)
38 PF01370 Epimerase: NAD depend 99.8 1.3E-20 2.8E-25 146.9 11.5 136 59-194 1-155 (236)
39 PLN02166 dTDP-glucose 4,6-dehy 99.8 1.7E-20 3.7E-25 159.1 13.1 134 55-194 119-278 (436)
40 PLN02583 cinnamoyl-CoA reducta 99.8 4.5E-20 9.7E-25 149.5 14.9 139 55-193 5-177 (297)
41 PRK05993 short chain dehydroge 99.8 1.4E-20 3.1E-25 150.8 11.8 137 55-192 3-161 (277)
42 PF07993 NAD_binding_4: Male s 99.8 7.4E-21 1.6E-25 150.4 9.8 134 61-194 1-183 (249)
43 PRK06179 short chain dehydroge 99.8 3E-20 6.4E-25 148.2 12.9 135 56-193 4-159 (270)
44 PRK06180 short chain dehydroge 99.8 4.2E-20 9.1E-25 148.1 13.5 139 55-193 3-164 (277)
45 PLN02206 UDP-glucuronate decar 99.8 2.9E-20 6.3E-25 157.9 13.2 133 55-193 118-276 (442)
46 PRK06398 aldose dehydrogenase; 99.8 7.3E-20 1.6E-24 145.3 14.4 133 55-193 5-158 (258)
47 PLN02260 probable rhamnose bio 99.8 5E-20 1.1E-24 164.1 14.7 139 55-193 5-173 (668)
48 PRK10084 dTDP-glucose 4,6 dehy 99.8 5.9E-20 1.3E-24 151.8 14.0 137 57-193 1-181 (352)
49 PF04321 RmlD_sub_bind: RmlD s 99.8 1.8E-20 3.8E-25 151.1 10.2 126 57-199 1-145 (286)
50 PRK06194 hypothetical protein; 99.8 5E-20 1.1E-24 148.1 12.2 139 55-193 5-175 (287)
51 COG3320 Putative dehydrogenase 99.8 5.8E-20 1.3E-24 148.9 12.2 138 57-194 1-183 (382)
52 PRK07856 short chain dehydroge 99.8 1.1E-19 2.4E-24 143.5 13.6 137 54-193 4-162 (252)
53 PRK06182 short chain dehydroge 99.8 3.7E-20 8E-25 148.0 10.9 136 56-192 3-159 (273)
54 KOG1430 C-3 sterol dehydrogena 99.8 1E-19 2.3E-24 148.5 13.6 139 55-194 3-168 (361)
55 PLN03209 translocon at the inn 99.8 8.4E-20 1.8E-24 156.9 13.2 140 54-193 78-241 (576)
56 PRK05717 oxidoreductase; Valid 99.8 1.2E-19 2.7E-24 143.5 13.3 141 53-193 7-171 (255)
57 PLN02778 3,5-epimerase/4-reduc 99.8 1.3E-19 2.9E-24 146.8 13.4 122 54-194 7-156 (298)
58 TIGR01181 dTDP_gluc_dehyt dTDP 99.8 1.3E-19 2.8E-24 147.0 13.2 136 58-193 1-164 (317)
59 PF13460 NAD_binding_10: NADH( 99.8 3.1E-19 6.8E-24 134.4 14.3 125 59-193 1-134 (183)
60 PRK06463 fabG 3-ketoacyl-(acyl 99.8 1.2E-19 2.5E-24 143.6 12.5 140 54-193 5-166 (255)
61 PRK13394 3-hydroxybutyrate deh 99.8 1.8E-19 3.8E-24 142.8 12.7 139 55-193 6-171 (262)
62 PRK07023 short chain dehydroge 99.8 1.6E-19 3.5E-24 141.8 12.3 138 56-193 1-164 (243)
63 PRK05866 short chain dehydroge 99.8 1.5E-19 3.2E-24 146.2 12.3 139 55-193 39-206 (293)
64 PLN02253 xanthoxin dehydrogena 99.8 3.3E-19 7.1E-24 142.9 14.2 140 54-193 16-182 (280)
65 COG1091 RfbD dTDP-4-dehydrorha 99.8 1.3E-19 2.9E-24 143.3 11.5 124 58-199 2-144 (281)
66 PRK07806 short chain dehydroge 99.8 2.6E-19 5.7E-24 140.9 13.2 139 55-193 5-167 (248)
67 TIGR01214 rmlD dTDP-4-dehydror 99.8 1.7E-19 3.6E-24 145.0 12.2 119 58-193 1-138 (287)
68 PRK11150 rfaD ADP-L-glycero-D- 99.8 7.6E-20 1.7E-24 148.6 10.2 129 59-193 2-154 (308)
69 PRK07024 short chain dehydroge 99.8 1.3E-19 2.7E-24 143.7 11.1 138 56-193 2-165 (257)
70 PRK09291 short chain dehydroge 99.8 2.3E-19 4.9E-24 141.8 12.4 138 55-192 1-158 (257)
71 PRK07814 short chain dehydroge 99.8 3E-19 6.5E-24 142.1 13.0 140 54-193 8-174 (263)
72 PRK06483 dihydromonapterin red 99.8 2.1E-19 4.5E-24 140.6 11.8 139 55-193 1-162 (236)
73 PRK07523 gluconate 5-dehydroge 99.8 2.7E-19 5.8E-24 141.5 12.3 140 54-193 8-173 (255)
74 PRK08263 short chain dehydroge 99.8 2.7E-19 5.9E-24 143.2 12.4 139 55-193 2-163 (275)
75 PRK12745 3-ketoacyl-(acyl-carr 99.8 3.2E-19 6.9E-24 140.9 12.6 138 56-193 2-174 (256)
76 PRK08642 fabG 3-ketoacyl-(acyl 99.8 1.7E-19 3.7E-24 142.1 11.0 139 55-193 4-173 (253)
77 PRK07063 short chain dehydroge 99.8 2.5E-19 5.5E-24 142.1 11.9 140 54-193 5-172 (260)
78 PRK07478 short chain dehydroge 99.8 5.9E-19 1.3E-23 139.5 13.5 139 55-193 5-171 (254)
79 PRK06523 short chain dehydroge 99.8 8.5E-19 1.8E-23 139.0 14.2 136 54-193 7-166 (260)
80 KOG2865 NADH:ubiquinone oxidor 99.8 3.9E-19 8.4E-24 138.8 11.7 144 55-200 60-209 (391)
81 PRK07825 short chain dehydroge 99.8 3.3E-19 7.2E-24 142.4 11.7 138 55-192 4-163 (273)
82 PRK08267 short chain dehydroge 99.8 2.5E-19 5.4E-24 142.1 10.8 138 56-193 1-163 (260)
83 TIGR01179 galE UDP-glucose-4-e 99.8 1.1E-18 2.4E-23 142.1 14.7 136 58-193 1-159 (328)
84 PLN00141 Tic62-NAD(P)-related 99.8 1.5E-18 3.3E-23 137.2 14.7 141 53-193 14-171 (251)
85 PRK12481 2-deoxy-D-gluconate 3 99.8 4.5E-19 9.7E-24 140.2 11.5 140 54-193 6-170 (251)
86 PRK08278 short chain dehydroge 99.8 1.5E-18 3.3E-23 138.8 14.8 139 55-193 5-178 (273)
87 PRK08339 short chain dehydroge 99.8 5.3E-19 1.2E-23 140.8 12.0 140 54-193 6-171 (263)
88 PRK12367 short chain dehydroge 99.8 5.7E-19 1.2E-23 139.3 12.1 136 53-189 11-160 (245)
89 PRK12429 3-hydroxybutyrate deh 99.8 6.5E-19 1.4E-23 139.1 12.4 139 55-193 3-167 (258)
90 PRK12937 short chain dehydroge 99.8 8.7E-19 1.9E-23 137.5 13.0 140 54-193 3-167 (245)
91 PRK06101 short chain dehydroge 99.8 7.4E-19 1.6E-23 138.0 12.6 137 56-192 1-154 (240)
92 TIGR03325 BphB_TodD cis-2,3-di 99.8 6.7E-19 1.4E-23 139.9 12.4 139 55-193 4-169 (262)
93 PRK08063 enoyl-(acyl carrier p 99.8 4.9E-19 1.1E-23 139.4 11.4 139 55-193 3-168 (250)
94 PRK09135 pteridine reductase; 99.8 5.6E-19 1.2E-23 138.7 11.6 139 55-193 5-170 (249)
95 PRK06197 short chain dehydroge 99.8 6.7E-19 1.5E-23 143.0 12.4 140 54-193 14-192 (306)
96 PRK12827 short chain dehydroge 99.8 1.3E-18 2.7E-23 136.7 13.5 139 55-193 5-174 (249)
97 PRK10538 malonic semialdehyde 99.8 6.4E-19 1.4E-23 138.9 11.9 137 57-193 1-161 (248)
98 PRK07201 short chain dehydroge 99.8 6.3E-19 1.4E-23 156.6 13.2 136 57-193 1-165 (657)
99 PRK07067 sorbitol dehydrogenas 99.8 4.6E-19 1E-23 140.3 11.1 140 54-193 4-167 (257)
100 PRK05876 short chain dehydroge 99.8 6.1E-19 1.3E-23 141.4 11.8 138 55-192 5-169 (275)
101 PRK06171 sorbitol-6-phosphate 99.8 1.5E-18 3.2E-23 138.1 13.9 136 54-193 7-172 (266)
102 PLN02996 fatty acyl-CoA reduct 99.8 7.8E-19 1.7E-23 151.0 13.2 118 54-171 9-167 (491)
103 PRK08264 short chain dehydroge 99.8 1.3E-18 2.8E-23 136.1 13.3 137 55-193 5-160 (238)
104 PRK09134 short chain dehydroge 99.8 1.2E-18 2.7E-23 138.0 13.3 140 54-193 7-173 (258)
105 PRK07102 short chain dehydroge 99.8 5.6E-19 1.2E-23 138.7 11.1 138 56-193 1-162 (243)
106 PRK06914 short chain dehydroge 99.8 9.2E-19 2E-23 140.3 12.4 138 55-193 2-167 (280)
107 PRK06138 short chain dehydroge 99.8 7.8E-19 1.7E-23 138.3 11.8 140 54-193 3-167 (252)
108 PRK06128 oxidoreductase; Provi 99.8 4.5E-18 9.7E-23 137.9 16.5 140 54-193 53-219 (300)
109 PRK05875 short chain dehydroge 99.8 4.6E-19 9.9E-24 141.7 10.5 139 55-193 6-173 (276)
110 PRK08265 short chain dehydroge 99.8 1.1E-18 2.5E-23 138.6 12.7 139 55-193 5-164 (261)
111 TIGR02197 heptose_epim ADP-L-g 99.8 9.3E-19 2E-23 142.2 12.4 132 59-193 1-152 (314)
112 PRK12826 3-ketoacyl-(acyl-carr 99.8 1.2E-18 2.7E-23 136.9 12.6 139 55-193 5-170 (251)
113 TIGR01746 Thioester-redct thio 99.8 7.4E-19 1.6E-23 145.1 11.8 136 58-193 1-179 (367)
114 PRK08220 2,3-dihydroxybenzoate 99.8 2E-18 4.4E-23 136.1 13.7 136 54-193 6-162 (252)
115 PRK07904 short chain dehydroge 99.8 2.9E-18 6.4E-23 135.8 14.7 138 55-192 7-172 (253)
116 PRK08643 acetoin reductase; Va 99.8 9.4E-19 2E-23 138.4 11.8 139 55-193 1-166 (256)
117 PRK06841 short chain dehydroge 99.8 1.4E-18 3E-23 137.3 12.6 140 54-193 13-175 (255)
118 PRK07775 short chain dehydroge 99.8 1.3E-18 2.8E-23 139.3 12.5 140 54-193 8-173 (274)
119 TIGR03206 benzo_BadH 2-hydroxy 99.8 8.5E-19 1.8E-23 138.0 11.3 139 55-193 2-166 (250)
120 PRK08085 gluconate 5-dehydroge 99.8 1.3E-18 2.8E-23 137.6 12.3 140 54-193 7-172 (254)
121 PRK12746 short chain dehydroge 99.8 1.1E-18 2.3E-23 137.8 11.9 139 55-193 5-174 (254)
122 PRK07060 short chain dehydroge 99.8 4.1E-19 8.9E-24 139.3 9.3 140 54-193 7-164 (245)
123 PRK07774 short chain dehydroge 99.8 1.5E-18 3.2E-23 136.6 12.5 137 54-193 4-169 (250)
124 PRK06200 2,3-dihydroxy-2,3-dih 99.8 1.3E-18 2.7E-23 138.3 12.1 139 55-193 5-170 (263)
125 PRK05693 short chain dehydroge 99.8 1E-18 2.3E-23 139.7 11.7 137 56-193 1-157 (274)
126 PRK08251 short chain dehydroge 99.8 2E-18 4.3E-23 135.9 13.1 138 56-193 2-168 (248)
127 PRK07231 fabG 3-ketoacyl-(acyl 99.8 1E-18 2.3E-23 137.4 11.5 139 55-193 4-168 (251)
128 PRK12747 short chain dehydroge 99.8 1.5E-18 3.1E-23 137.1 12.3 139 55-193 3-172 (252)
129 PRK12384 sorbitol-6-phosphate 99.8 1.2E-18 2.6E-23 138.0 11.8 139 55-193 1-168 (259)
130 PRK12935 acetoacetyl-CoA reduc 99.8 1.7E-18 3.6E-23 136.2 12.5 139 55-193 5-170 (247)
131 PRK08213 gluconate 5-dehydroge 99.8 1.3E-18 2.8E-23 137.9 12.0 140 54-193 10-180 (259)
132 PLN02725 GDP-4-keto-6-deoxyman 99.8 7.7E-19 1.7E-23 142.2 10.8 119 60-193 1-144 (306)
133 TIGR01832 kduD 2-deoxy-D-gluco 99.8 2E-18 4.3E-23 135.9 12.8 140 54-193 3-167 (248)
134 PRK08628 short chain dehydroge 99.8 3E-18 6.5E-23 135.7 13.8 140 54-193 5-167 (258)
135 PRK12825 fabG 3-ketoacyl-(acyl 99.8 1.2E-18 2.5E-23 136.6 11.3 139 55-193 5-170 (249)
136 PRK08589 short chain dehydroge 99.8 2E-18 4.4E-23 138.0 12.9 137 55-193 5-168 (272)
137 PRK12743 oxidoreductase; Provi 99.8 1.7E-18 3.7E-23 137.1 12.3 139 55-193 1-167 (256)
138 PRK07666 fabG 3-ketoacyl-(acyl 99.8 2.9E-18 6.4E-23 134.3 13.4 139 55-193 6-170 (239)
139 PRK08277 D-mannonate oxidoredu 99.8 2.8E-18 6.1E-23 137.4 13.4 140 54-193 8-188 (278)
140 PRK06500 short chain dehydroge 99.8 1.8E-18 3.8E-23 136.1 12.1 139 55-193 5-164 (249)
141 PRK05653 fabG 3-ketoacyl-(acyl 99.8 2.3E-18 5E-23 134.8 12.7 139 55-193 4-168 (246)
142 PRK06113 7-alpha-hydroxysteroi 99.8 2.4E-18 5.3E-23 136.1 12.8 140 54-193 9-173 (255)
143 PRK07454 short chain dehydroge 99.8 1.4E-18 3.1E-23 136.2 11.3 138 55-192 5-168 (241)
144 PRK12823 benD 1,6-dihydroxycyc 99.8 2.1E-18 4.6E-23 136.7 12.3 137 54-193 6-169 (260)
145 PRK07453 protochlorophyllide o 99.8 2.8E-18 6E-23 140.4 13.3 139 55-193 5-207 (322)
146 PRK07035 short chain dehydroge 99.8 3.1E-18 6.8E-23 135.1 13.1 140 54-193 6-172 (252)
147 PRK07890 short chain dehydroge 99.8 1.3E-18 2.8E-23 137.6 11.0 139 55-193 4-168 (258)
148 PRK06935 2-deoxy-D-gluconate 3 99.8 2.8E-18 6.1E-23 136.0 12.8 140 54-193 13-177 (258)
149 PRK09242 tropinone reductase; 99.8 2.9E-18 6.3E-23 135.7 12.7 141 53-193 6-174 (257)
150 PRK06196 oxidoreductase; Provi 99.8 1.4E-18 2.9E-23 141.9 11.1 140 54-193 24-195 (315)
151 PRK07985 oxidoreductase; Provi 99.8 7.5E-18 1.6E-22 136.3 15.3 140 54-193 47-213 (294)
152 PRK07097 gluconate 5-dehydroge 99.8 3.6E-18 7.8E-23 135.9 13.2 140 54-193 8-173 (265)
153 PRK06114 short chain dehydroge 99.8 3E-18 6.5E-23 135.6 12.6 140 54-193 6-174 (254)
154 TIGR01963 PHB_DH 3-hydroxybuty 99.8 2.2E-18 4.7E-23 135.9 11.7 138 56-193 1-164 (255)
155 PRK05650 short chain dehydroge 99.8 2.7E-18 5.9E-23 137.0 12.3 137 57-193 1-163 (270)
156 PRK05854 short chain dehydroge 99.8 2E-18 4.4E-23 140.8 11.8 140 54-193 12-189 (313)
157 PRK12742 oxidoreductase; Provi 99.8 1.9E-18 4.2E-23 135.0 11.1 139 55-193 5-160 (237)
158 PRK12824 acetoacetyl-CoA reduc 99.8 3.7E-18 8.1E-23 133.8 12.5 138 56-193 2-166 (245)
159 PRK06139 short chain dehydroge 99.8 3.2E-18 7E-23 140.5 12.6 140 54-193 5-170 (330)
160 PRK06701 short chain dehydroge 99.8 1E-17 2.2E-22 135.3 15.3 141 53-193 43-209 (290)
161 PRK05884 short chain dehydroge 99.8 1.7E-18 3.7E-23 134.7 10.4 133 57-193 1-154 (223)
162 PRK07109 short chain dehydroge 99.8 4E-18 8.7E-23 140.3 13.0 139 54-192 6-170 (334)
163 PRK06057 short chain dehydroge 99.8 3.2E-18 6.8E-23 135.5 11.9 138 54-192 5-167 (255)
164 PRK12939 short chain dehydroge 99.8 2.8E-18 6.1E-23 134.9 11.6 139 55-193 6-170 (250)
165 PF00106 adh_short: short chai 99.8 1.4E-18 3E-23 128.8 9.2 137 57-193 1-162 (167)
166 PRK07577 short chain dehydroge 99.8 8.7E-18 1.9E-22 131.0 13.9 131 56-193 3-153 (234)
167 PRK05557 fabG 3-ketoacyl-(acyl 99.8 8E-18 1.7E-22 131.8 13.7 138 55-192 4-168 (248)
168 PRK06079 enoyl-(acyl carrier p 99.8 6.3E-18 1.4E-22 133.8 13.1 140 54-193 5-171 (252)
169 PRK08416 7-alpha-hydroxysteroi 99.8 3.5E-18 7.6E-23 135.7 11.5 140 54-193 6-179 (260)
170 PRK08993 2-deoxy-D-gluconate 3 99.8 5.4E-18 1.2E-22 134.1 12.6 140 54-193 8-172 (253)
171 PRK08177 short chain dehydroge 99.8 5.1E-18 1.1E-22 131.9 12.2 138 56-193 1-161 (225)
172 PRK07792 fabG 3-ketoacyl-(acyl 99.8 5.9E-18 1.3E-22 137.6 13.1 140 54-193 10-182 (306)
173 PRK05872 short chain dehydroge 99.8 5.9E-18 1.3E-22 137.0 13.0 140 54-193 7-170 (296)
174 PRK06550 fabG 3-ketoacyl-(acyl 99.8 1.1E-17 2.5E-22 130.5 14.0 135 54-192 3-153 (235)
175 PRK07677 short chain dehydroge 99.8 5.1E-18 1.1E-22 134.0 12.1 137 56-192 1-164 (252)
176 PRK12936 3-ketoacyl-(acyl-carr 99.8 4.5E-18 9.8E-23 133.3 11.7 138 55-192 5-165 (245)
177 PRK07576 short chain dehydroge 99.8 3.7E-18 8.1E-23 135.9 11.4 139 54-192 7-170 (264)
178 PRK05867 short chain dehydroge 99.8 2.7E-18 5.8E-23 135.7 10.3 140 54-193 7-175 (253)
179 PRK07326 short chain dehydroge 99.8 4.6E-18 9.9E-23 132.9 11.4 139 55-193 5-167 (237)
180 PRK06124 gluconate 5-dehydroge 99.8 6.1E-18 1.3E-22 133.8 12.1 140 54-193 9-174 (256)
181 PRK12744 short chain dehydroge 99.8 1E-17 2.2E-22 132.6 13.4 139 55-193 7-173 (257)
182 PRK06924 short chain dehydroge 99.8 4.6E-18 1E-22 134.0 11.2 138 56-193 1-168 (251)
183 PRK07062 short chain dehydroge 99.8 7.1E-18 1.5E-22 134.1 12.3 139 54-192 6-172 (265)
184 PRK09186 flagellin modificatio 99.8 7.5E-18 1.6E-22 133.1 12.4 138 55-192 3-181 (256)
185 PRK12938 acetyacetyl-CoA reduc 99.8 5.8E-18 1.3E-22 133.0 11.7 139 55-193 2-167 (246)
186 PRK06172 short chain dehydroge 99.8 5.7E-18 1.2E-22 133.7 11.5 140 54-193 5-171 (253)
187 KOG1429 dTDP-glucose 4-6-dehyd 99.8 9.5E-18 2.1E-22 130.9 12.3 141 50-196 21-187 (350)
188 PRK06181 short chain dehydroge 99.8 1.3E-17 2.8E-22 132.3 13.6 137 56-192 1-163 (263)
189 PRK06484 short chain dehydroge 99.8 8.7E-18 1.9E-22 145.7 13.6 141 53-193 266-428 (520)
190 PRK08945 putative oxoacyl-(acy 99.8 8.3E-18 1.8E-22 132.4 12.2 141 53-193 9-179 (247)
191 PRK05565 fabG 3-ketoacyl-(acyl 99.8 1.1E-17 2.3E-22 131.3 12.7 140 54-193 3-169 (247)
192 PRK12828 short chain dehydroge 99.8 1E-17 2.2E-22 130.7 12.4 139 54-192 5-167 (239)
193 PRK12829 short chain dehydroge 99.8 9E-18 2E-22 133.1 12.2 140 54-193 9-174 (264)
194 PRK08219 short chain dehydroge 99.8 7.4E-18 1.6E-22 130.7 11.3 135 56-192 3-155 (227)
195 PRK08017 oxidoreductase; Provi 99.8 4.9E-18 1.1E-22 134.1 10.5 136 56-192 2-159 (256)
196 PRK06077 fabG 3-ketoacyl-(acyl 99.8 6.9E-18 1.5E-22 132.9 11.1 139 55-193 5-168 (252)
197 PRK08226 short chain dehydroge 99.8 9.4E-18 2E-22 133.2 11.9 139 55-193 5-169 (263)
198 PRK12748 3-ketoacyl-(acyl-carr 99.8 1.8E-17 3.9E-22 131.2 13.3 140 54-193 3-181 (256)
199 PRK07831 short chain dehydroge 99.8 2.2E-17 4.7E-22 131.2 13.7 140 54-193 15-184 (262)
200 PRK05865 hypothetical protein; 99.8 1.5E-17 3.3E-22 149.3 14.0 116 57-193 1-116 (854)
201 PLN02260 probable rhamnose bio 99.8 2E-17 4.2E-22 147.5 14.6 119 55-193 379-526 (668)
202 PRK07074 short chain dehydroge 99.8 1.3E-17 2.8E-22 132.0 12.1 138 55-193 1-162 (257)
203 PRK07791 short chain dehydroge 99.8 1.1E-17 2.5E-22 134.7 11.8 140 54-193 4-184 (286)
204 PRK07041 short chain dehydroge 99.8 5.1E-18 1.1E-22 132.1 9.4 134 60-193 1-151 (230)
205 PRK09072 short chain dehydroge 99.7 1.8E-17 3.9E-22 131.7 12.5 139 55-193 4-166 (263)
206 PRK06949 short chain dehydroge 99.7 7.9E-18 1.7E-22 133.1 10.3 140 54-193 7-180 (258)
207 PRK07069 short chain dehydroge 99.7 1.8E-17 4E-22 130.4 12.0 136 58-193 1-165 (251)
208 PRK06505 enoyl-(acyl carrier p 99.7 1.1E-17 2.4E-22 133.9 10.7 139 55-193 6-173 (271)
209 PRK08594 enoyl-(acyl carrier p 99.7 4.9E-17 1.1E-21 129.1 14.3 140 54-193 5-175 (257)
210 PRK08415 enoyl-(acyl carrier p 99.7 2.4E-17 5.2E-22 132.1 12.6 138 55-193 4-171 (274)
211 PRK07533 enoyl-(acyl carrier p 99.7 2.4E-17 5.2E-22 130.9 12.4 140 54-193 8-176 (258)
212 PRK06123 short chain dehydroge 99.7 2.8E-17 6.1E-22 129.2 12.7 137 56-193 2-171 (248)
213 PRK08936 glucose-1-dehydrogena 99.7 4E-17 8.6E-22 129.6 13.6 140 54-193 5-172 (261)
214 PRK06947 glucose-1-dehydrogena 99.7 1.9E-17 4.1E-22 130.3 11.4 138 55-193 1-171 (248)
215 PRK08340 glucose-1-dehydrogena 99.7 2.2E-17 4.9E-22 130.9 11.8 137 57-193 1-165 (259)
216 TIGR02415 23BDH acetoin reduct 99.7 2.1E-17 4.4E-22 130.4 11.4 137 57-193 1-164 (254)
217 PRK06125 short chain dehydroge 99.7 3.1E-17 6.8E-22 130.0 12.2 140 54-193 5-167 (259)
218 TIGR02685 pter_reduc_Leis pter 99.7 2.2E-17 4.8E-22 131.6 11.3 137 57-193 2-187 (267)
219 TIGR01829 AcAcCoA_reduct aceto 99.7 3E-17 6.4E-22 128.5 11.7 136 57-192 1-163 (242)
220 PRK05855 short chain dehydroge 99.7 2.3E-17 5.1E-22 144.1 12.3 139 55-193 314-479 (582)
221 PRK08159 enoyl-(acyl carrier p 99.7 3.1E-17 6.7E-22 131.3 11.8 139 55-193 9-176 (272)
222 PRK07424 bifunctional sterol d 99.7 4.3E-17 9.4E-22 136.6 13.1 136 54-191 176-328 (406)
223 PRK07370 enoyl-(acyl carrier p 99.7 4.7E-17 1E-21 129.3 12.6 139 55-193 5-175 (258)
224 KOG1201 Hydroxysteroid 17-beta 99.7 3.3E-17 7.3E-22 129.2 11.5 140 53-192 35-199 (300)
225 PRK06953 short chain dehydroge 99.7 6.9E-17 1.5E-21 125.3 13.0 137 56-193 1-160 (222)
226 PRK07578 short chain dehydroge 99.7 7.4E-17 1.6E-21 123.1 12.9 124 57-193 1-139 (199)
227 TIGR01831 fabG_rel 3-oxoacyl-( 99.7 3.5E-17 7.5E-22 128.1 11.4 135 59-193 1-163 (239)
228 PRK07201 short chain dehydroge 99.7 2.9E-17 6.3E-22 146.0 12.2 140 54-193 369-536 (657)
229 PRK07984 enoyl-(acyl carrier p 99.7 5.1E-17 1.1E-21 129.4 12.2 139 55-193 5-173 (262)
230 PRK08703 short chain dehydroge 99.7 6.9E-17 1.5E-21 126.5 12.6 139 55-193 5-174 (239)
231 smart00822 PKS_KR This enzymat 99.7 5.4E-17 1.2E-21 120.4 11.3 136 57-192 1-162 (180)
232 PRK06940 short chain dehydroge 99.7 6.4E-17 1.4E-21 129.7 12.2 136 55-192 1-182 (275)
233 PRK12859 3-ketoacyl-(acyl-carr 99.7 1.8E-16 3.9E-21 125.7 14.4 140 54-193 4-182 (256)
234 PRK09730 putative NAD(P)-bindi 99.7 4.6E-17 1E-21 127.8 10.9 137 56-193 1-170 (247)
235 TIGR01830 3oxo_ACP_reduc 3-oxo 99.7 5.3E-17 1.1E-21 126.7 11.1 135 59-193 1-162 (239)
236 TIGR02632 RhaD_aldol-ADH rhamn 99.7 6E-17 1.3E-21 144.2 12.8 140 54-193 412-580 (676)
237 PLN02780 ketoreductase/ oxidor 99.7 5.7E-17 1.2E-21 132.7 11.3 139 55-193 52-222 (320)
238 PRK06484 short chain dehydroge 99.7 9.5E-17 2.1E-21 139.2 13.3 138 55-192 4-167 (520)
239 PRK06603 enoyl-(acyl carrier p 99.7 7.8E-17 1.7E-21 128.1 11.6 139 55-193 7-174 (260)
240 PRK06198 short chain dehydroge 99.7 5E-17 1.1E-21 128.7 10.4 140 54-193 4-171 (260)
241 PRK07832 short chain dehydroge 99.7 1E-16 2.2E-21 128.1 12.1 136 57-192 1-164 (272)
242 PRK08690 enoyl-(acyl carrier p 99.7 1.2E-16 2.5E-21 127.2 11.8 139 55-193 5-174 (261)
243 PRK08324 short chain dehydroge 99.7 9.3E-17 2E-21 143.3 12.2 140 54-193 420-585 (681)
244 PRK06997 enoyl-(acyl carrier p 99.7 1.4E-16 3.1E-21 126.6 12.0 139 55-193 5-173 (260)
245 PRK05599 hypothetical protein; 99.7 1.9E-16 4.1E-21 124.9 12.6 136 57-193 1-164 (246)
246 PRK08261 fabG 3-ketoacyl-(acyl 99.7 7.7E-17 1.7E-21 137.6 11.1 140 54-193 208-370 (450)
247 PLN00016 RNA-binding protein; 99.7 1.6E-16 3.5E-21 132.8 12.0 127 53-193 49-199 (378)
248 PLN02503 fatty acyl-CoA reduct 99.7 3E-16 6.6E-21 136.9 14.0 113 55-167 118-269 (605)
249 TIGR01289 LPOR light-dependent 99.7 2.3E-16 4.9E-21 128.8 11.9 113 55-167 2-144 (314)
250 PRK07889 enoyl-(acyl carrier p 99.7 2.6E-16 5.7E-21 124.8 11.6 138 55-193 6-172 (256)
251 PRK08303 short chain dehydroge 99.7 4.2E-16 9E-21 126.8 13.0 139 54-192 6-188 (305)
252 PRK09009 C factor cell-cell si 99.7 5.8E-16 1.3E-20 120.9 13.2 134 57-193 1-162 (235)
253 PRK12320 hypothetical protein; 99.7 7.1E-16 1.5E-20 136.2 14.4 120 57-193 1-120 (699)
254 TIGR01500 sepiapter_red sepiap 99.7 1E-16 2.3E-21 126.9 8.2 136 58-193 2-178 (256)
255 KOG1200 Mitochondrial/plastidi 99.7 1.9E-16 4.1E-21 117.5 8.9 135 54-188 12-173 (256)
256 KOG0725 Reductases with broad 99.7 9.9E-16 2.2E-20 122.3 13.7 142 52-193 4-178 (270)
257 PRK08862 short chain dehydroge 99.7 6.8E-16 1.5E-20 120.5 12.4 135 55-192 4-167 (227)
258 PRK05786 fabG 3-ketoacyl-(acyl 99.7 3.7E-16 8E-21 122.1 10.7 139 55-193 4-164 (238)
259 PRK08217 fabG 3-ketoacyl-(acyl 99.7 2.6E-16 5.6E-21 123.8 8.9 138 55-193 4-177 (253)
260 KOG1209 1-Acyl dihydroxyaceton 99.7 1.4E-16 3E-21 119.9 6.8 138 55-192 6-165 (289)
261 KOG1610 Corticosteroid 11-beta 99.7 1.3E-15 2.8E-20 120.8 12.4 140 53-192 26-191 (322)
262 TIGR03649 ergot_EASG ergot alk 99.7 2.1E-15 4.6E-20 121.3 13.3 99 58-167 1-106 (285)
263 KOG4169 15-hydroxyprostaglandi 99.7 4.6E-16 1E-20 118.1 8.7 139 54-192 3-163 (261)
264 PF05368 NmrA: NmrA-like famil 99.7 6E-16 1.3E-20 121.0 9.7 129 59-193 1-133 (233)
265 COG3967 DltE Short-chain dehyd 99.7 7.5E-16 1.6E-20 115.2 9.5 138 54-191 3-164 (245)
266 COG1089 Gmd GDP-D-mannose dehy 99.7 1.4E-15 2.9E-20 119.0 11.3 139 55-193 1-169 (345)
267 PLN02730 enoyl-[acyl-carrier-p 99.7 1.5E-15 3.2E-20 123.2 11.9 140 53-193 6-207 (303)
268 TIGR03443 alpha_am_amid L-amin 99.6 2.3E-15 5.1E-20 143.6 14.1 139 55-193 970-1164(1389)
269 KOG1208 Dehydrogenases with di 99.6 4.8E-15 1E-19 120.3 13.4 142 52-193 31-211 (314)
270 COG1028 FabG Dehydrogenases wi 99.6 3.6E-15 7.8E-20 117.5 11.9 138 54-192 3-169 (251)
271 PLN00015 protochlorophyllide r 99.6 4E-15 8.7E-20 121.1 10.9 108 60-167 1-138 (308)
272 COG0702 Predicted nucleoside-d 99.6 9.1E-15 2E-19 116.4 12.7 131 57-193 1-132 (275)
273 KOG0747 Putative NAD+-dependen 99.6 4.9E-15 1.1E-19 115.8 9.1 138 57-194 7-172 (331)
274 KOG4039 Serine/threonine kinas 99.6 1.6E-14 3.5E-19 105.8 11.2 143 54-200 16-164 (238)
275 KOG1203 Predicted dehydrogenas 99.6 3.1E-14 6.7E-19 117.9 14.2 147 52-198 75-240 (411)
276 KOG1207 Diacetyl reductase/L-x 99.6 4.3E-15 9.4E-20 108.6 6.6 139 54-192 5-163 (245)
277 TIGR01777 yfcH conserved hypot 99.6 1.9E-14 4.1E-19 115.6 10.7 127 59-191 1-148 (292)
278 KOG1611 Predicted short chain- 99.6 3.6E-14 7.8E-19 107.7 10.5 138 56-193 3-185 (249)
279 PRK06300 enoyl-(acyl carrier p 99.5 6.6E-14 1.4E-18 113.5 11.3 140 54-193 6-206 (299)
280 COG2910 Putative NADH-flavin r 99.5 1.8E-13 3.9E-18 100.9 12.2 126 57-188 1-137 (211)
281 TIGR02813 omega_3_PfaA polyket 99.5 1.2E-13 2.6E-18 135.6 12.0 139 54-192 1995-2202(2582)
282 KOG1014 17 beta-hydroxysteroid 99.5 1.2E-13 2.6E-18 109.6 9.8 138 55-192 48-213 (312)
283 PF08659 KR: KR domain; Inter 99.5 2.2E-13 4.7E-18 102.8 10.9 135 58-192 2-162 (181)
284 KOG1210 Predicted 3-ketosphing 99.5 1.9E-13 4.1E-18 108.5 9.8 136 57-192 34-198 (331)
285 KOG4288 Predicted oxidoreducta 99.5 1.3E-13 2.8E-18 104.9 7.0 143 57-199 53-195 (283)
286 PF13561 adh_short_C2: Enoyl-( 99.5 1E-13 2.2E-18 108.9 6.3 131 63-193 1-161 (241)
287 PRK12428 3-alpha-hydroxysteroi 99.5 3E-13 6.5E-18 106.3 8.7 115 72-192 1-150 (241)
288 KOG1221 Acyl-CoA reductase [Li 99.4 9.7E-12 2.1E-16 104.7 12.5 141 54-194 10-223 (467)
289 KOG1199 Short-chain alcohol de 99.3 2.4E-12 5.1E-17 94.3 3.3 134 54-187 7-175 (260)
290 COG1090 Predicted nucleoside-d 99.3 1.9E-11 4.1E-16 95.8 7.8 106 59-172 1-118 (297)
291 PRK06720 hypothetical protein; 99.2 1.6E-10 3.5E-15 86.2 11.8 79 54-132 14-104 (169)
292 KOG1372 GDP-mannose 4,6 dehydr 99.2 9.6E-11 2.1E-15 90.5 9.9 133 55-187 27-192 (376)
293 PRK08309 short chain dehydroge 99.2 1.8E-10 4E-15 86.4 8.9 98 57-167 1-113 (177)
294 PTZ00325 malate dehydrogenase; 99.1 9.1E-10 2E-14 89.9 11.8 115 53-167 5-126 (321)
295 KOG1204 Predicted dehydrogenas 99.1 1.4E-10 2.9E-15 88.5 6.3 135 54-192 4-171 (253)
296 KOG1478 3-keto sterol reductas 99.1 7.8E-10 1.7E-14 85.7 9.6 137 55-191 2-209 (341)
297 KOG1431 GDP-L-fucose synthetas 99.1 5.8E-10 1.3E-14 85.1 7.4 123 56-193 1-150 (315)
298 COG1748 LYS9 Saccharopine dehy 99.0 1.3E-09 2.7E-14 90.5 8.8 76 56-132 1-79 (389)
299 KOG2774 NAD dependent epimeras 98.9 5.1E-09 1.1E-13 80.5 8.5 133 55-191 43-196 (366)
300 PLN00106 malate dehydrogenase 98.9 1.1E-08 2.5E-13 83.6 10.7 111 56-166 18-135 (323)
301 cd01336 MDH_cytoplasmic_cytoso 98.9 1.2E-08 2.6E-13 83.7 10.6 110 57-166 3-129 (325)
302 PRK13656 trans-2-enoyl-CoA red 98.9 5.6E-08 1.2E-12 80.6 12.8 78 54-132 39-142 (398)
303 PRK09620 hypothetical protein; 98.8 2E-08 4.4E-13 78.3 8.5 78 55-132 2-98 (229)
304 PF03435 Saccharop_dh: Sacchar 98.8 2.1E-08 4.5E-13 84.2 8.4 73 59-132 1-78 (386)
305 PRK06732 phosphopantothenate-- 98.7 5.5E-08 1.2E-12 76.0 8.6 74 58-133 17-93 (229)
306 PRK05086 malate dehydrogenase; 98.7 2.3E-07 5.1E-12 75.7 11.6 108 57-166 1-118 (312)
307 COG0623 FabI Enoyl-[acyl-carri 98.6 6.3E-07 1.4E-11 68.8 11.5 138 54-191 4-170 (259)
308 PRK05579 bifunctional phosphop 98.6 3.3E-07 7.1E-12 77.1 8.6 73 54-132 186-278 (399)
309 cd01078 NAD_bind_H4MPT_DH NADP 98.6 1.9E-07 4.1E-12 71.1 6.5 78 54-131 26-107 (194)
310 TIGR00715 precor6x_red precorr 98.5 1.3E-06 2.9E-11 69.2 10.8 74 57-132 1-76 (256)
311 KOG2733 Uncharacterized membra 98.5 2.4E-07 5.2E-12 75.2 6.5 76 58-133 7-95 (423)
312 cd00704 MDH Malate dehydrogena 98.4 2.9E-06 6.3E-11 69.6 11.1 101 58-165 2-126 (323)
313 TIGR01758 MDH_euk_cyt malate d 98.4 2.6E-06 5.6E-11 69.9 10.6 102 58-166 1-126 (324)
314 COG0569 TrkA K+ transport syst 98.4 3E-06 6.6E-11 66.1 9.6 74 57-131 1-76 (225)
315 TIGR02114 coaB_strep phosphopa 98.4 1E-06 2.2E-11 68.8 6.4 66 60-132 18-91 (227)
316 TIGR00521 coaBC_dfp phosphopan 98.4 2.8E-06 6.1E-11 71.3 9.1 105 54-165 183-320 (390)
317 PRK12548 shikimate 5-dehydroge 98.3 1.7E-06 3.6E-11 70.0 6.9 76 54-130 124-208 (289)
318 PRK14982 acyl-ACP reductase; P 98.2 2.7E-06 5.8E-11 70.0 5.5 74 53-133 152-227 (340)
319 PRK14874 aspartate-semialdehyd 98.1 3.2E-05 6.9E-10 63.9 11.0 70 56-131 1-73 (334)
320 COG3268 Uncharacterized conser 98.1 4.2E-06 9.1E-11 67.6 5.3 76 56-133 6-83 (382)
321 PF04127 DFP: DNA / pantothena 98.1 1.9E-05 4.2E-10 59.6 8.0 65 63-133 26-94 (185)
322 PF00056 Ldh_1_N: lactate/mala 98.1 2.1E-05 4.5E-10 56.9 7.8 103 57-166 1-118 (141)
323 PLN02968 Probable N-acetyl-gam 98.1 2E-05 4.4E-10 66.0 8.7 99 54-167 36-136 (381)
324 PLN02819 lysine-ketoglutarate 98.0 3.1E-05 6.8E-10 72.0 9.2 77 54-131 567-658 (1042)
325 cd01338 MDH_choloroplast_like 98.0 9.8E-05 2.1E-09 60.6 11.0 129 56-191 2-163 (322)
326 cd05294 LDH-like_MDH_nadp A la 98.0 5.9E-05 1.3E-09 61.6 9.6 109 57-166 1-122 (309)
327 PRK14106 murD UDP-N-acetylmura 98.0 3.9E-05 8.5E-10 65.7 8.6 72 55-132 4-79 (450)
328 KOG4022 Dihydropteridine reduc 98.0 0.0006 1.3E-08 50.1 13.1 132 57-193 4-157 (236)
329 PRK09496 trkA potassium transp 97.9 2E-05 4.3E-10 67.5 6.4 73 57-130 1-74 (453)
330 PRK00436 argC N-acetyl-gamma-g 97.9 6.7E-05 1.5E-09 62.2 8.9 97 55-166 1-100 (343)
331 COG4982 3-oxoacyl-[acyl-carrie 97.9 0.00038 8.2E-09 60.8 13.3 142 55-197 395-584 (866)
332 TIGR01759 MalateDH-SF1 malate 97.9 0.00012 2.7E-09 60.0 9.8 111 56-166 3-129 (323)
333 PF01488 Shikimate_DH: Shikima 97.9 2.5E-05 5.5E-10 56.0 5.1 74 53-132 9-86 (135)
334 cd05291 HicDH_like L-2-hydroxy 97.8 0.00029 6.2E-09 57.5 11.3 101 57-165 1-117 (306)
335 TIGR01296 asd_B aspartate-semi 97.8 0.00019 4.2E-09 59.4 10.0 68 58-131 1-71 (339)
336 KOG1202 Animal-type fatty acid 97.8 4.6E-05 9.9E-10 70.5 6.7 145 55-199 1767-1942(2376)
337 cd01337 MDH_glyoxysomal_mitoch 97.8 0.00016 3.5E-09 59.0 9.2 106 57-165 1-117 (310)
338 PRK05671 aspartate-semialdehyd 97.8 0.0002 4.4E-09 59.1 9.8 93 55-166 3-98 (336)
339 PRK00066 ldh L-lactate dehydro 97.8 0.00078 1.7E-08 55.2 12.5 103 55-165 5-122 (315)
340 TIGR01850 argC N-acetyl-gamma- 97.8 0.00015 3.2E-09 60.2 8.3 95 57-166 1-100 (346)
341 PRK05442 malate dehydrogenase; 97.7 0.00045 9.8E-09 56.8 10.9 104 56-166 4-131 (326)
342 PRK04148 hypothetical protein; 97.7 0.00016 3.6E-09 51.5 7.2 96 55-166 16-111 (134)
343 PF02254 TrkA_N: TrkA-N domain 97.7 0.00025 5.3E-09 49.1 7.9 70 59-130 1-71 (116)
344 PRK09496 trkA potassium transp 97.7 0.00032 6.9E-09 60.1 9.8 101 54-166 229-331 (453)
345 TIGR01772 MDH_euk_gproteo mala 97.7 0.00027 5.8E-09 57.8 8.9 106 58-166 1-116 (312)
346 PRK00048 dihydrodipicolinate r 97.7 0.00048 1E-08 54.8 10.1 68 56-131 1-70 (257)
347 PF01118 Semialdhyde_dh: Semia 97.7 0.00075 1.6E-08 47.3 9.7 89 58-166 1-98 (121)
348 cd01080 NAD_bind_m-THF_DH_Cycl 97.6 0.00034 7.3E-09 52.1 7.3 57 53-131 41-97 (168)
349 PLN02383 aspartate semialdehyd 97.6 0.0012 2.7E-08 54.7 11.3 69 55-131 6-79 (344)
350 cd01065 NAD_bind_Shikimate_DH 97.6 7.2E-05 1.6E-09 54.5 3.6 76 54-133 17-93 (155)
351 PF01113 DapB_N: Dihydrodipico 97.5 0.00013 2.7E-09 51.6 4.4 89 57-159 1-93 (124)
352 PTZ00082 L-lactate dehydrogena 97.5 0.0028 6E-08 52.1 12.7 104 56-166 6-129 (321)
353 PTZ00117 malate dehydrogenase; 97.5 0.0006 1.3E-08 56.0 8.7 105 55-166 4-123 (319)
354 PRK12475 thiamine/molybdopteri 97.5 0.0012 2.5E-08 54.7 10.4 99 54-166 22-149 (338)
355 COG0039 Mdh Malate/lactate deh 97.5 0.00085 1.8E-08 54.6 9.3 108 57-166 1-118 (313)
356 PRK07688 thiamine/molybdopteri 97.5 0.0017 3.7E-08 53.8 10.7 99 54-166 22-149 (339)
357 KOG1494 NAD-dependent malate d 97.5 0.0013 2.8E-08 52.3 9.3 109 55-166 27-146 (345)
358 PRK08664 aspartate-semialdehyd 97.4 0.0019 4.1E-08 53.7 9.8 35 56-90 3-38 (349)
359 PRK10669 putative cation:proto 97.4 0.00043 9.4E-09 61.0 6.3 72 56-129 417-489 (558)
360 TIGR02853 spore_dpaA dipicolin 97.3 0.00052 1.1E-08 55.5 6.0 71 53-130 148-218 (287)
361 KOG1198 Zinc-binding oxidoredu 97.3 0.00091 2E-08 55.5 7.5 75 54-131 156-235 (347)
362 cd05290 LDH_3 A subgroup of L- 97.3 0.0067 1.5E-07 49.5 12.5 101 58-166 1-119 (307)
363 PLN00112 malate dehydrogenase 97.3 0.0038 8.2E-08 53.4 11.3 104 56-166 100-227 (444)
364 PF00899 ThiF: ThiF family; I 97.3 0.0062 1.3E-07 43.4 11.0 97 56-166 2-125 (135)
365 PRK06129 3-hydroxyacyl-CoA deh 97.3 0.00067 1.5E-08 55.4 6.6 34 57-91 3-36 (308)
366 PRK06223 malate dehydrogenase; 97.3 0.0016 3.5E-08 53.1 8.7 109 56-166 2-120 (307)
367 PRK06019 phosphoribosylaminoim 97.3 0.0016 3.4E-08 54.6 8.8 68 56-127 2-69 (372)
368 PRK03659 glutathione-regulated 97.3 0.0014 3.1E-08 58.4 8.4 73 56-130 400-473 (601)
369 PRK02472 murD UDP-N-acetylmura 97.3 0.0025 5.5E-08 54.6 9.7 73 55-133 4-80 (447)
370 PRK11199 tyrA bifunctional cho 97.3 0.001 2.2E-08 55.9 7.1 36 54-89 96-131 (374)
371 TIGR01763 MalateDH_bact malate 97.3 0.0022 4.9E-08 52.3 8.9 108 57-166 2-119 (305)
372 cd00757 ThiF_MoeB_HesA_family 97.2 0.0031 6.7E-08 49.3 9.3 99 54-166 19-144 (228)
373 cd00650 LDH_MDH_like NAD-depen 97.2 0.0013 2.9E-08 52.4 7.4 107 59-165 1-119 (263)
374 PRK08057 cobalt-precorrin-6x r 97.2 0.012 2.5E-07 46.6 12.4 74 55-132 1-76 (248)
375 PRK14192 bifunctional 5,10-met 97.2 0.0014 3.1E-08 52.8 7.3 56 53-130 156-211 (283)
376 TIGR00518 alaDH alanine dehydr 97.2 0.00077 1.7E-08 56.5 5.9 75 55-131 166-240 (370)
377 PRK00258 aroE shikimate 5-dehy 97.2 0.00037 7.9E-09 56.1 3.9 73 53-131 120-195 (278)
378 PRK08306 dipicolinate synthase 97.2 0.00052 1.1E-08 55.7 4.8 70 54-130 150-219 (296)
379 PF02826 2-Hacid_dh_C: D-isome 97.2 0.00048 1E-08 51.7 4.2 76 53-138 33-108 (178)
380 cd05292 LDH_2 A subgroup of L- 97.2 0.0018 3.9E-08 52.9 7.9 101 57-165 1-115 (308)
381 cd01075 NAD_bind_Leu_Phe_Val_D 97.2 0.00064 1.4E-08 52.0 5.0 39 53-92 25-63 (200)
382 PRK13982 bifunctional SbtC-lik 97.2 0.0026 5.6E-08 54.8 8.7 75 53-133 253-346 (475)
383 PRK08223 hypothetical protein; 97.2 0.005 1.1E-07 49.6 9.9 101 54-166 25-152 (287)
384 TIGR02356 adenyl_thiF thiazole 97.2 0.0045 9.8E-08 47.4 9.3 99 54-166 19-144 (202)
385 PRK11863 N-acetyl-gamma-glutam 97.2 0.0042 9.1E-08 50.8 9.5 58 55-130 1-59 (313)
386 cd05293 LDH_1 A subgroup of L- 97.1 0.011 2.5E-07 48.3 11.9 104 56-166 3-121 (312)
387 COG1064 AdhP Zn-dependent alco 97.1 0.0014 2.9E-08 54.0 6.2 73 55-130 166-238 (339)
388 PRK06718 precorrin-2 dehydroge 97.1 0.0023 4.9E-08 49.1 7.2 71 54-130 8-79 (202)
389 PRK09288 purT phosphoribosylgl 97.1 0.0034 7.4E-08 52.8 8.9 71 55-129 11-83 (395)
390 TIGR02354 thiF_fam2 thiamine b 97.1 0.02 4.3E-07 43.9 12.2 73 54-128 19-117 (200)
391 COG0026 PurK Phosphoribosylami 97.1 0.0027 5.8E-08 52.4 7.8 68 56-127 1-68 (375)
392 PLN02928 oxidoreductase family 97.1 0.0026 5.7E-08 52.8 7.9 79 53-132 156-237 (347)
393 cd08259 Zn_ADH5 Alcohol dehydr 97.1 0.0012 2.6E-08 53.7 5.7 74 55-131 162-236 (332)
394 PRK14175 bifunctional 5,10-met 97.1 0.0027 5.8E-08 51.2 7.5 58 53-132 155-212 (286)
395 PF03807 F420_oxidored: NADP o 97.0 0.00045 9.8E-09 46.1 2.3 67 58-131 1-71 (96)
396 PRK06598 aspartate-semialdehyd 97.0 0.0092 2E-07 49.8 10.4 71 56-131 1-75 (369)
397 PRK10537 voltage-gated potassi 97.0 0.0035 7.6E-08 52.9 8.1 70 56-129 240-310 (393)
398 PRK12549 shikimate 5-dehydroge 97.0 0.00036 7.8E-09 56.4 2.0 70 54-129 125-200 (284)
399 TIGR02355 moeB molybdopterin s 97.0 0.017 3.7E-07 45.5 11.4 99 54-166 22-147 (240)
400 PRK14194 bifunctional 5,10-met 97.0 0.0026 5.7E-08 51.5 6.9 38 53-90 156-193 (301)
401 cd00300 LDH_like L-lactate deh 97.0 0.0037 8.1E-08 50.9 7.9 100 59-165 1-115 (300)
402 PRK03562 glutathione-regulated 97.0 0.0013 2.9E-08 58.7 5.6 73 56-130 400-473 (621)
403 PRK08655 prephenate dehydrogen 97.0 0.0012 2.6E-08 56.6 5.1 67 57-130 1-67 (437)
404 COG0002 ArgC Acetylglutamate s 97.0 0.0036 7.9E-08 51.3 7.5 97 55-166 1-102 (349)
405 PRK13940 glutamyl-tRNA reducta 97.0 0.0013 2.8E-08 55.9 5.2 72 54-131 179-252 (414)
406 TIGR01470 cysG_Nterm siroheme 97.0 0.0026 5.7E-08 48.9 6.5 71 54-130 7-78 (205)
407 PRK06728 aspartate-semialdehyd 97.0 0.018 3.9E-07 47.8 11.7 69 56-131 5-78 (347)
408 TIGR01809 Shik-DH-AROM shikima 97.0 0.00087 1.9E-08 54.1 3.9 75 54-131 123-200 (282)
409 KOG0023 Alcohol dehydrogenase, 97.0 0.0014 3.1E-08 53.0 5.1 75 55-130 181-255 (360)
410 PRK05476 S-adenosyl-L-homocyst 97.0 0.0024 5.2E-08 54.3 6.5 68 54-131 210-277 (425)
411 PRK08328 hypothetical protein; 96.9 0.021 4.6E-07 44.7 11.4 98 55-166 26-151 (231)
412 PRK05597 molybdopterin biosynt 96.9 0.012 2.5E-07 49.2 10.4 99 54-166 26-151 (355)
413 PLN02602 lactate dehydrogenase 96.9 0.021 4.7E-07 47.5 11.8 102 57-165 38-154 (350)
414 TIGR01035 hemA glutamyl-tRNA r 96.9 0.0017 3.7E-08 55.3 5.5 72 54-131 178-250 (417)
415 TIGR00507 aroE shikimate 5-deh 96.9 0.0015 3.3E-08 52.3 4.8 70 54-131 115-188 (270)
416 PRK06719 precorrin-2 dehydroge 96.9 0.0056 1.2E-07 45.0 7.4 68 54-129 11-78 (157)
417 PRK14619 NAD(P)H-dependent gly 96.9 0.0035 7.6E-08 51.1 6.9 37 55-92 3-39 (308)
418 cd01483 E1_enzyme_family Super 96.9 0.031 6.6E-07 40.2 11.1 95 58-166 1-122 (143)
419 TIGR01757 Malate-DH_plant mala 96.9 0.016 3.5E-07 48.7 10.7 104 56-166 44-171 (387)
420 cd05295 MDH_like Malate dehydr 96.9 0.013 2.9E-07 50.1 10.3 104 56-166 123-250 (452)
421 PRK05690 molybdopterin biosynt 96.9 0.017 3.7E-07 45.6 10.3 99 54-166 30-155 (245)
422 PRK08040 putative semialdehyde 96.8 0.0081 1.8E-07 49.6 8.7 70 55-131 3-76 (336)
423 cd08266 Zn_ADH_like1 Alcohol d 96.8 0.0093 2E-07 48.4 9.1 97 55-167 166-267 (342)
424 PRK04308 murD UDP-N-acetylmura 96.8 0.016 3.5E-07 49.7 10.9 73 55-133 4-79 (445)
425 TIGR01851 argC_other N-acetyl- 96.8 0.01 2.2E-07 48.4 9.0 56 57-130 2-58 (310)
426 PRK08644 thiamine biosynthesis 96.8 0.017 3.7E-07 44.6 10.0 98 55-166 27-151 (212)
427 PRK08762 molybdopterin biosynt 96.8 0.011 2.5E-07 49.6 9.6 98 55-166 134-258 (376)
428 PRK00045 hemA glutamyl-tRNA re 96.8 0.0025 5.5E-08 54.4 5.7 72 54-131 180-252 (423)
429 PRK06487 glycerate dehydrogena 96.8 0.0056 1.2E-07 50.2 7.5 64 53-132 145-208 (317)
430 COG2085 Predicted dinucleotide 96.8 0.0019 4E-08 49.5 4.3 36 56-92 1-36 (211)
431 cd01487 E1_ThiF_like E1_ThiF_l 96.8 0.0042 9.2E-08 46.5 6.3 70 58-129 1-96 (174)
432 PRK01438 murD UDP-N-acetylmura 96.8 0.016 3.4E-07 50.2 10.6 72 54-132 14-89 (480)
433 TIGR01142 purT phosphoribosylg 96.8 0.0069 1.5E-07 50.7 8.1 68 58-129 1-70 (380)
434 cd05213 NAD_bind_Glutamyl_tRNA 96.8 0.0019 4.1E-08 52.9 4.5 74 54-133 176-250 (311)
435 PRK11064 wecC UDP-N-acetyl-D-m 96.8 0.011 2.4E-07 50.4 9.2 36 56-92 3-38 (415)
436 PLN02256 arogenate dehydrogena 96.7 0.0038 8.2E-08 50.9 6.0 69 52-130 32-101 (304)
437 PRK14188 bifunctional 5,10-met 96.7 0.0059 1.3E-07 49.5 6.9 35 53-87 155-189 (296)
438 PTZ00075 Adenosylhomocysteinas 96.7 0.0053 1.2E-07 52.8 7.0 69 53-131 251-319 (476)
439 TIGR00978 asd_EA aspartate-sem 96.7 0.017 3.6E-07 48.0 9.8 33 57-89 1-34 (341)
440 cd05212 NAD_bind_m-THF_DH_Cycl 96.7 0.0089 1.9E-07 43.1 7.1 58 53-132 25-82 (140)
441 PF03446 NAD_binding_2: NAD bi 96.7 0.00064 1.4E-08 50.2 1.2 36 56-92 1-36 (163)
442 COG0604 Qor NADPH:quinone redu 96.7 0.0038 8.3E-08 51.4 5.7 73 56-131 143-221 (326)
443 cd08295 double_bond_reductase_ 96.7 0.0033 7.2E-08 51.6 5.4 76 55-131 151-231 (338)
444 TIGR01915 npdG NADPH-dependent 96.7 0.0025 5.3E-08 49.5 4.3 36 57-92 1-36 (219)
445 TIGR03026 NDP-sugDHase nucleot 96.7 0.023 5E-07 48.3 10.6 75 57-132 1-87 (411)
446 PLN02353 probable UDP-glucose 96.7 0.0083 1.8E-07 51.9 7.8 110 56-167 1-128 (473)
447 PRK15469 ghrA bifunctional gly 96.7 0.011 2.3E-07 48.5 8.1 67 54-131 134-200 (312)
448 PF00670 AdoHcyase_NAD: S-aden 96.7 0.0016 3.5E-08 47.9 2.9 68 54-131 21-88 (162)
449 PF02882 THF_DHG_CYH_C: Tetrah 96.7 0.012 2.6E-07 43.4 7.5 57 53-131 33-89 (160)
450 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.028 6.2E-07 48.1 11.0 105 60-193 42-148 (450)
451 PRK07066 3-hydroxybutyryl-CoA 96.7 0.015 3.3E-07 47.8 8.9 75 55-130 6-92 (321)
452 PRK11880 pyrroline-5-carboxyla 96.7 0.0085 1.9E-07 47.7 7.3 67 55-129 1-70 (267)
453 PRK07574 formate dehydrogenase 96.7 0.0057 1.2E-07 51.5 6.5 69 54-131 190-258 (385)
454 PRK06436 glycerate dehydrogena 96.6 0.011 2.4E-07 48.2 8.0 66 53-132 119-184 (303)
455 COG0373 HemA Glutamyl-tRNA red 96.6 0.0029 6.3E-08 53.4 4.7 73 54-132 176-249 (414)
456 COG0111 SerA Phosphoglycerate 96.6 0.01 2.2E-07 48.8 7.8 69 54-132 140-208 (324)
457 cd00401 AdoHcyase S-adenosyl-L 96.6 0.0062 1.3E-07 51.7 6.5 68 54-131 200-267 (413)
458 cd01489 Uba2_SUMO Ubiquitin ac 96.6 0.039 8.5E-07 45.1 10.9 96 58-166 1-123 (312)
459 PRK00141 murD UDP-N-acetylmura 96.6 0.011 2.5E-07 51.1 8.3 75 53-133 12-86 (473)
460 PRK15116 sulfur acceptor prote 96.6 0.052 1.1E-06 43.5 11.3 99 54-166 28-154 (268)
461 COG0289 DapB Dihydrodipicolina 96.6 0.023 5E-07 45.0 9.1 93 56-162 2-98 (266)
462 PRK06932 glycerate dehydrogena 96.6 0.0098 2.1E-07 48.8 7.4 65 53-132 144-208 (314)
463 PRK14851 hypothetical protein; 96.6 0.024 5.1E-07 51.2 10.3 101 54-166 41-168 (679)
464 PF03721 UDPG_MGDP_dh_N: UDP-g 96.6 0.0014 3.1E-08 49.5 2.3 34 57-91 1-34 (185)
465 PRK07878 molybdopterin biosynt 96.6 0.047 1E-06 46.2 11.7 98 55-166 41-165 (392)
466 PRK05600 thiamine biosynthesis 96.6 0.028 6E-07 47.2 10.1 99 54-166 39-164 (370)
467 TIGR01771 L-LDH-NAD L-lactate 96.6 0.034 7.3E-07 45.3 10.3 98 61-166 1-114 (299)
468 COG0136 Asd Aspartate-semialde 96.6 0.018 4E-07 47.2 8.7 26 56-81 1-26 (334)
469 cd01339 LDH-like_MDH L-lactate 96.5 0.01 2.2E-07 48.3 7.2 100 59-165 1-115 (300)
470 PF00070 Pyr_redox: Pyridine n 96.5 0.0071 1.5E-07 39.0 5.1 34 58-92 1-34 (80)
471 PRK00094 gpsA NAD(P)H-dependen 96.5 0.0027 6E-08 51.9 3.9 35 56-91 1-35 (325)
472 PLN02948 phosphoribosylaminoim 96.5 0.025 5.4E-07 50.3 10.0 71 54-128 20-90 (577)
473 PRK08410 2-hydroxyacid dehydro 96.5 0.015 3.3E-07 47.6 8.2 65 53-131 142-206 (311)
474 cd01485 E1-1_like Ubiquitin ac 96.5 0.08 1.7E-06 40.4 11.7 99 55-166 18-146 (198)
475 PRK02705 murD UDP-N-acetylmura 96.5 0.023 5E-07 48.9 9.6 74 58-132 2-79 (459)
476 TIGR01161 purK phosphoribosyla 96.5 0.01 2.2E-07 49.3 7.2 66 58-127 1-66 (352)
477 PRK06849 hypothetical protein; 96.5 0.0083 1.8E-07 50.5 6.6 38 55-92 3-40 (389)
478 PRK12749 quinate/shikimate deh 96.5 0.0055 1.2E-07 49.6 5.2 76 54-130 122-205 (288)
479 TIGR01745 asd_gamma aspartate- 96.5 0.042 9.1E-07 45.9 10.3 92 57-166 1-98 (366)
480 cd01484 E1-2_like Ubiquitin ac 96.4 0.064 1.4E-06 42.1 10.8 96 58-166 1-124 (234)
481 PLN02494 adenosylhomocysteinas 96.4 0.009 1.9E-07 51.3 6.4 68 54-131 252-319 (477)
482 PRK14852 hypothetical protein; 96.4 0.032 6.9E-07 52.0 10.2 101 55-167 331-458 (989)
483 PLN00203 glutamyl-tRNA reducta 96.4 0.0046 1E-07 54.0 4.7 74 54-131 264-339 (519)
484 COG1004 Ugd Predicted UDP-gluc 96.4 0.016 3.5E-07 48.5 7.4 100 57-166 1-120 (414)
485 TIGR00936 ahcY adenosylhomocys 96.4 0.0098 2.1E-07 50.3 6.3 67 54-130 193-259 (406)
486 PRK14179 bifunctional 5,10-met 96.4 0.012 2.6E-07 47.4 6.5 58 53-132 155-212 (284)
487 PRK12480 D-lactate dehydrogena 96.4 0.0097 2.1E-07 49.1 6.2 65 54-131 144-208 (330)
488 PRK13243 glyoxylate reductase; 96.4 0.0091 2E-07 49.4 6.0 67 54-131 148-214 (333)
489 PLN02586 probable cinnamyl alc 96.4 0.021 4.6E-07 47.6 8.2 75 55-131 183-257 (360)
490 PF13380 CoA_binding_2: CoA bi 96.4 0.015 3.2E-07 40.5 6.2 85 57-166 1-88 (116)
491 PRK09424 pntA NAD(P) transhydr 96.4 0.0092 2E-07 52.0 6.1 76 55-132 164-259 (509)
492 cd01492 Aos1_SUMO Ubiquitin ac 96.4 0.052 1.1E-06 41.4 9.7 97 55-166 20-143 (197)
493 cd08293 PTGR2 Prostaglandin re 96.4 0.0065 1.4E-07 49.9 5.1 74 57-131 156-234 (345)
494 PRK14027 quinate/shikimate deh 96.3 0.0059 1.3E-07 49.3 4.6 74 54-130 125-203 (283)
495 cd00755 YgdL_like Family of ac 96.3 0.059 1.3E-06 42.2 10.1 97 55-165 10-134 (231)
496 PRK10792 bifunctional 5,10-met 96.3 0.018 3.9E-07 46.4 7.3 57 53-131 156-212 (285)
497 PF02571 CbiJ: Precorrin-6x re 96.3 0.08 1.7E-06 42.0 10.9 73 57-131 1-76 (249)
498 PRK07877 hypothetical protein; 96.3 0.031 6.7E-07 50.8 9.4 97 55-166 106-229 (722)
499 PRK14189 bifunctional 5,10-met 96.3 0.017 3.8E-07 46.5 7.1 57 53-131 155-211 (285)
500 TIGR02825 B4_12hDH leukotriene 96.3 0.012 2.5E-07 48.1 6.2 75 55-131 138-217 (325)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=1.4e-26 Score=181.73 Aligned_cols=137 Identities=25% Similarity=0.355 Sum_probs=118.8
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccC--
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF-- 132 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~-- 132 (200)
++||||||+||||++.+.+|++.|++|+++++-.....+......++++++|+.|.+.++++|+ ++|.|||+||..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 5899999999999999999999999999999876554332221227999999999999999997 589999999953
Q ss_pred ----CCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC----------cCCcchhhhHHhhHHHHHhh
Q 029008 133 ----GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 133 ----~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~----------~~~~~Y~~sK~~~E~~~~~~ 193 (200)
..+...|+.|+.|++.|+++|++.|+++|||.|| +.||.+. .|.++||+||.+.|+++++.
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDA 156 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHH
Confidence 3677889999999999999999999999999999 6788764 46789999999999999975
No 2
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.92 E-value=1.4e-24 Score=174.25 Aligned_cols=136 Identities=34% Similarity=0.462 Sum_probs=111.0
Q ss_pred EEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCccc-ccCCCC-eeEEEccCCCHHHHHHHhcCCCEEEEccccCC--
Q 029008 60 LVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR-DSWANN-VIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-- 133 (200)
Q Consensus 60 lVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~-~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~-- 133 (200)
|||||+||||++|+++|+++| ++|+++++....... .....+ .+++++|++|++++.++++++|+|||+|++..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 699999999999999999999 799999987655331 122223 34999999999999999999999999998643
Q ss_pred ---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCc---C-------------CcCCcchhhhHHhhHHHHHhh
Q 029008 134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV---A-------------NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 134 ---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~---~-------------~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.++.++++|+.|+.+++++|++.++++|||+||. +++. . ..+...|+.||+.+|+++.++
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence 2356889999999999999999999999999995 2222 0 124468999999999999986
Q ss_pred cc
Q 029008 194 YS 195 (200)
Q Consensus 194 ~~ 195 (200)
..
T Consensus 161 ~~ 162 (280)
T PF01073_consen 161 NG 162 (280)
T ss_pred cc
Confidence 43
No 3
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.91 E-value=7.1e-24 Score=175.22 Aligned_cols=140 Identities=21% Similarity=0.179 Sum_probs=115.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----------ccCCCCeeEEEccCCCHHHHHHHhcCCC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALDGVT 123 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 123 (200)
+.+|+|+||||+||||++|+++|+++|++|++++|....... .....++.++.+|+.|.+.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 456899999999999999999999999999999986432110 0011367899999999999999999999
Q ss_pred EEEEccccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC----------cCCcchhhhHHhh
Q 029008 124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKDSN 186 (200)
Q Consensus 124 ~vi~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~----------~~~~~Y~~sK~~~ 186 (200)
+|||+|+... ++...+++|+.|+.+++++|++.++++|||+|| ..||... .|.+.|+.+|.++
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN 172 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence 9999998532 334568999999999999999999999999998 4676421 3557899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
|++++.+
T Consensus 173 e~~~~~~ 179 (348)
T PRK15181 173 ELYADVF 179 (348)
T ss_pred HHHHHHH
Confidence 9998864
No 4
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.90 E-value=6.2e-23 Score=174.40 Aligned_cols=142 Identities=17% Similarity=0.217 Sum_probs=111.3
Q ss_pred CCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc------c----------------ccCCCCeeEEEccC
Q 029008 52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------R----------------DSWANNVIWHQGNL 109 (200)
Q Consensus 52 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~----------------~~~~~~~~~~~~Dl 109 (200)
...++|+|+||||+||||++|+++|+++|++|++++|...... . .....+++++.+|+
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 3357889999999999999999999999999999875321100 0 00013688999999
Q ss_pred CCHHHHHHHhc--CCCEEEEccccCCC---------CcccchhhHHHHHHHHHHHHHcCCC-EEEEEec-cccCcC----
Q 029008 110 LSSDSWKEALD--GVTAVISCVGGFGS---------NSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGVA---- 172 (200)
Q Consensus 110 ~d~~~~~~~~~--~~d~vi~~ag~~~~---------~~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS-~~~~~~---- 172 (200)
+|++.+.++++ ++|+|||+|+.... +...+++|+.|+.+++++|++.+++ +||++|| ..||.+
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~ 202 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDI 202 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCC
Confidence 99999999998 48999999975321 1234689999999999999999885 8999998 457642
Q ss_pred -------------------CcCCcchhhhHHhhHHHHHhh
Q 029008 173 -------------------NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 173 -------------------~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
..|.++|+.+|.++|.+++.+
T Consensus 203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~ 242 (442)
T PLN02572 203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT 242 (442)
T ss_pred cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHH
Confidence 123468999999999999875
No 5
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.90 E-value=7.8e-23 Score=168.24 Aligned_cols=140 Identities=19% Similarity=0.239 Sum_probs=112.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----cc-CCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DS-WANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
.++++|+||||+||||++++++|+++|++|+++.|+...... .. ...+++++.+|++|++.+.++++++|+|||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 357899999999999999999999999999988887543210 11 113688999999999999999999999999
Q ss_pred ccccCCC----C-cccchhhHHHHHHHHHHHHHc-CCCEEEEEec-cccCcC-----------------------CcCCc
Q 029008 128 CVGGFGS----N-SYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGVA-----------------------NYLLQ 177 (200)
Q Consensus 128 ~ag~~~~----~-~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS-~~~~~~-----------------------~~~~~ 177 (200)
+|+.... + ...+++|+.++.++++++.+. ++++||++|| ..|+.. .+|.+
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~ 166 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW 166 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence 9985321 1 235689999999999999876 5889999999 445521 12456
Q ss_pred chhhhHHhhHHHHHhh
Q 029008 178 GYYEGKDSNLSPLLAC 193 (200)
Q Consensus 178 ~Y~~sK~~~E~~~~~~ 193 (200)
+|+.||.++|++++.+
T Consensus 167 ~Y~~sK~~~E~~~~~~ 182 (338)
T PLN00198 167 GYPASKTLAEKAAWKF 182 (338)
T ss_pred hhHHHHHHHHHHHHHH
Confidence 7999999999998875
No 6
>PLN02214 cinnamoyl-CoA reductase
Probab=99.90 E-value=8.4e-23 Score=168.49 Aligned_cols=140 Identities=24% Similarity=0.269 Sum_probs=115.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----cc--CCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DS--WANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
.++++|+||||+||||++++++|+++|++|++++|+.+.... .. ...+++++.+|++|++.+.++++++|+|||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 357899999999999999999999999999999997553110 11 123588999999999999999999999999
Q ss_pred ccccCC-CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc--ccCcCC-------------------cCCcchhhhHHh
Q 029008 128 CVGGFG-SNSYMYKINGTANINAIRAASEKGVKRFVYISAA--DFGVAN-------------------YLLQGYYEGKDS 185 (200)
Q Consensus 128 ~ag~~~-~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~--~~~~~~-------------------~~~~~Y~~sK~~ 185 (200)
+|+... .+...+++|+.++.+++++|.+.++++||++||. .|+.+. .+.+.|+.+|.+
T Consensus 88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~ 167 (342)
T PLN02214 88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV 167 (342)
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence 999753 4567789999999999999999999999999983 465321 134579999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
+|++++.+
T Consensus 168 aE~~~~~~ 175 (342)
T PLN02214 168 AEQAAWET 175 (342)
T ss_pred HHHHHHHH
Confidence 99999875
No 7
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.90 E-value=7.1e-23 Score=167.23 Aligned_cols=134 Identities=25% Similarity=0.297 Sum_probs=112.5
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCC-CC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-SN 135 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~-~~ 135 (200)
|+|+||||||++|++++++|+++|++|++++|+.++. ......+++++.+|++|++++.++++++|+|||+++... ++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~ 79 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDL 79 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCc
Confidence 4899999999999999999999999999999986432 111234789999999999999999999999999987532 34
Q ss_pred cccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 136 SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 136 ~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
...+++|+.++.+++++|+++|+++||++||. +....+..+|..+|..+|+++++.
T Consensus 80 ~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~--~~~~~~~~~~~~~K~~~e~~l~~~ 135 (317)
T CHL00194 80 YNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL--NAEQYPYIPLMKLKSDIEQKLKKS 135 (317)
T ss_pred cchhhhhHHHHHHHHHHHHHcCCCEEEEeccc--cccccCCChHHHHHHHHHHHHHHc
Confidence 56788999999999999999999999999984 222334567999999999999876
No 8
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.89 E-value=1.2e-22 Score=162.84 Aligned_cols=139 Identities=23% Similarity=0.278 Sum_probs=114.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
.+++|+||||+||||++|++.|+++||.|++.+|+++.... .....+.+.+.+|+.|++++.+++++||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 57899999999999999999999999999999999876321 11244689999999999999999999999999
Q ss_pred ccccCCCC-----cccchhhHHHHHHHHHHHHHcC-CCEEEEEeccc--cCc-CC---------cC----------Ccch
Q 029008 128 CVGGFGSN-----SYMYKINGTANINAIRAASEKG-VKRFVYISAAD--FGV-AN---------YL----------LQGY 179 (200)
Q Consensus 128 ~ag~~~~~-----~~~~~~n~~~~~~~~~~a~~~~-~~~~v~vSS~~--~~~-~~---------~~----------~~~Y 179 (200)
+|.+...+ ....+..+.|+.+++++|++.. ++|||++||.. ... +. .. ..+|
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 99986532 2588999999999999999887 99999999942 111 11 01 1479
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
..+|..+|+...+.
T Consensus 165 ~~sK~lAEkaAw~f 178 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEF 178 (327)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999977763
No 9
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.89 E-value=1.2e-22 Score=167.46 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=110.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCc----cccc-------CCCCeeEEEccCCCHHHHHHHhcC--CC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS-------WANNVIWHQGNLLSSDSWKEALDG--VT 123 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~--~d 123 (200)
|+|+||||+||||++++++|+++|++|++++|..+.. .... ...+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999875421 1110 023588999999999999999985 69
Q ss_pred EEEEccccCC------CCcccchhhHHHHHHHHHHHHHcCCC---EEEEEec-cccCcC----------CcCCcchhhhH
Q 029008 124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK---RFVYISA-ADFGVA----------NYLLQGYYEGK 183 (200)
Q Consensus 124 ~vi~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~---~~v~vSS-~~~~~~----------~~~~~~Y~~sK 183 (200)
+|||+|+... .+...+++|+.|+.+++++|.+.+++ +||++|| ..||.. ..|.++|+.||
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 160 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK 160 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 9999999643 23345678999999999999988764 8999999 456642 13567899999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
.++|.+++.+
T Consensus 161 ~~~e~~~~~~ 170 (343)
T TIGR01472 161 LYAHWITVNY 170 (343)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 10
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.89 E-value=3.3e-22 Score=166.55 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=114.2
Q ss_pred CCCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 51 VPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 51 ~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
.+...+|+|+||||+||||++++++|.++|++|++++|........ .....+++.+|++|.+.+..+++++|+|||+|+
T Consensus 16 ~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 16 YWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 3455778999999999999999999999999999999864331111 112357889999999999999999999999997
Q ss_pred cCC-------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC----------------CcCCcchhhhHHhh
Q 029008 131 GFG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------------NYLLQGYYEGKDSN 186 (200)
Q Consensus 131 ~~~-------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~----------------~~~~~~Y~~sK~~~ 186 (200)
... .+...+..|+.++.+++++|++.++++||++|| ..|+.. ..|.+.|+.+|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~ 174 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 174 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHH
Confidence 542 234456789999999999999999999999999 456521 23456899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
|++++.+
T Consensus 175 E~~~~~~ 181 (370)
T PLN02695 175 EELCKHY 181 (370)
T ss_pred HHHHHHH
Confidence 9998774
No 11
>PLN02427 UDP-apiose/xylose synthase
Probab=99.89 E-value=1.9e-22 Score=168.89 Aligned_cols=141 Identities=17% Similarity=0.226 Sum_probs=111.5
Q ss_pred CCCCCCeEEEEccCchhHHHHHHHHHHC-CCcEEEeecCCCCccc---c---cCCCCeeEEEccCCCHHHHHHHhcCCCE
Q 029008 52 PPPPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR---D---SWANNVIWHQGNLLSSDSWKEALDGVTA 124 (200)
Q Consensus 52 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~---~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 124 (200)
.+.+.|+|+||||+||||++|+++|+++ |++|++++|+...... . .+..+++++.+|+.|.+.+.++++++|+
T Consensus 10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ 89 (386)
T PLN02427 10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL 89 (386)
T ss_pred CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence 3445679999999999999999999998 5999999986543111 0 1224799999999999999999999999
Q ss_pred EEEccccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC------------------------
Q 029008 125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN------------------------ 173 (200)
Q Consensus 125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~------------------------ 173 (200)
|||+|+... .+...+..|+.++.+++++|++.+ ++||++|| ..||...
T Consensus 90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 999998532 123456789999999999998877 79999999 4566320
Q ss_pred --------cCCcchhhhHHhhHHHHHhh
Q 029008 174 --------YLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 174 --------~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.+.+.|+.+|.++|++++.+
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 196 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAE 196 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHH
Confidence 11247999999999999864
No 12
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.89 E-value=2e-22 Score=164.42 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=111.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--c-----cCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
.+++|+||||+||||++++++|+++|++|++++|+...... . ....+++++.+|++|++.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 46899999999999999999999999999999987543210 0 0124789999999999999999999999999
Q ss_pred ccccCC----CC-cccchhhHHHHHHHHHHHHHc-CCCEEEEEeccc---cCcCC-------------cC------Ccch
Q 029008 128 CVGGFG----SN-SYMYKINGTANINAIRAASEK-GVKRFVYISAAD---FGVAN-------------YL------LQGY 179 (200)
Q Consensus 128 ~ag~~~----~~-~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~~---~~~~~-------------~~------~~~Y 179 (200)
+|+... .+ ...+++|+.++.+++++|.+. ++++||++||.. |+... .+ .+.|
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 998642 22 257889999999999999887 889999999942 54210 01 2479
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
+.+|..+|++++.+
T Consensus 163 ~~sK~~~E~~~~~~ 176 (322)
T PLN02662 163 VLSKTLAEEAAWKF 176 (322)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 13
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.89 E-value=4.2e-22 Score=162.81 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=111.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--c-----cCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
.+++|+||||+||||++++++|+++|++|+++.|+...... . ....+++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 46899999999999999999999999999999887654211 0 1124689999999999999999999999999
Q ss_pred ccccCC----CC-cccchhhHHHHHHHHHHHHHc-CCCEEEEEecc-c--cCcCC-------------------cCCcch
Q 029008 128 CVGGFG----SN-SYMYKINGTANINAIRAASEK-GVKRFVYISAA-D--FGVAN-------------------YLLQGY 179 (200)
Q Consensus 128 ~ag~~~----~~-~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~-~--~~~~~-------------------~~~~~Y 179 (200)
+|+... ++ ...+++|+.++.+++++|++. ++++||++||. . |+.+. .+.+.|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 998642 12 246789999999999999885 68999999994 2 33211 124679
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
+.+|..+|++++++
T Consensus 164 ~~sK~~aE~~~~~~ 177 (322)
T PLN02986 164 PLSKILAENAAWEF 177 (322)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988875
No 14
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.89 E-value=3.5e-22 Score=163.66 Aligned_cols=135 Identities=22% Similarity=0.216 Sum_probs=111.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
++|+|+||||+|+||++++++|+++| ++|++++|+...... .....++.++.+|++|++.+.++++++|+|||+|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999999999986 789999887543211 1112468899999999999999999999999999
Q ss_pred ccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 130 GGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 130 g~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
|... ++...+++|+.++.++++++.+.++++||++||. .+..|.++|+.+|+++|++++.
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~---~~~~p~~~Y~~sK~~~E~l~~~ 148 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTD---KAANPINLYGATKLASDKLFVA 148 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC---CCCCCCCHHHHHHHHHHHHHHH
Confidence 8632 2245789999999999999999999999999994 2334567899999999999876
No 15
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.88 E-value=5e-22 Score=163.55 Aligned_cols=140 Identities=19% Similarity=0.212 Sum_probs=112.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCc----cccc------CCCCeeEEEccCCCHHHHHHHhcC--
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDS------WANNVIWHQGNLLSSDSWKEALDG-- 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~-- 121 (200)
.++++|+||||+||||++++++|+++|++|++++|..... .+.. ...++.++.+|++|.+.+.++++.
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 4568999999999999999999999999999999875421 1110 123588999999999999998874
Q ss_pred CCEEEEccccCC------CCcccchhhHHHHHHHHHHHHHcCCC-----EEEEEec-cccCcCC---------cCCcchh
Q 029008 122 VTAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVK-----RFVYISA-ADFGVAN---------YLLQGYY 180 (200)
Q Consensus 122 ~d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~-----~~v~vSS-~~~~~~~---------~~~~~Y~ 180 (200)
+|+|||+||... .+...+++|+.++.++++++.+.+++ +||++|| ..||... .|.+.|+
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~ 163 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA 163 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence 699999999632 33456789999999999999988865 8999998 4576532 2567899
Q ss_pred hhHHhhHHHHHhh
Q 029008 181 EGKDSNLSPLLAC 193 (200)
Q Consensus 181 ~sK~~~E~~~~~~ 193 (200)
.||.++|++++.+
T Consensus 164 ~sK~~~e~~~~~~ 176 (340)
T PLN02653 164 VAKVAAHWYTVNY 176 (340)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 16
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=4e-22 Score=156.21 Aligned_cols=143 Identities=21% Similarity=0.195 Sum_probs=115.7
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCC-----cccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRS-----SLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS 127 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~ 127 (200)
|++|||||+||||++++++++++.. +|++++.-.-. .......++..|+++|+.|.+.+.++++ ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5899999999999999999999864 46776653211 1112224589999999999999999998 5899999
Q ss_pred ccccC------CCCcccchhhHHHHHHHHHHHHHcCCC-EEEEEec-cccCcC------------CcCCcchhhhHHhhH
Q 029008 128 CVGGF------GSNSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGVA------------NYLLQGYYEGKDSNL 187 (200)
Q Consensus 128 ~ag~~------~~~~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS-~~~~~~------------~~~~~~Y~~sK~~~E 187 (200)
.|+-+ ..+..+.++|+.|+.++++++++...+ ||++||+ -+||.- -.|.++|++||++.+
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 99854 356788999999999999999998764 9999999 456642 257799999999999
Q ss_pred HHHHhhccCccc
Q 029008 188 SPLLACYSLCCL 199 (200)
Q Consensus 188 ~~~~~~~~~~~~ 199 (200)
.++++|+..++|
T Consensus 161 ~lVray~~TYgl 172 (340)
T COG1088 161 LLVRAYVRTYGL 172 (340)
T ss_pred HHHHHHHHHcCC
Confidence 999999765543
No 17
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.88 E-value=4.9e-22 Score=164.09 Aligned_cols=137 Identities=18% Similarity=0.243 Sum_probs=109.1
Q ss_pred CCeEEEEccCchhHHHHHHHHHHC-CCcEEEeecCCCCcccccCCCCeeEEEccCC-CHHHHHHHhcCCCEEEEccccCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLL-SSDSWKEALDGVTAVISCVGGFG 133 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~d~vi~~ag~~~ 133 (200)
||+|+||||+||||++|+++|++. |++|++++|+...........+++++.+|+. +.+.+.++++++|+|||+|+...
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 468999999999999999999986 6999999986533111111246899999997 77888888999999999998532
Q ss_pred ------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC-----------------cCCcchhhhHHhhHHH
Q 029008 134 ------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------------YLLQGYYEGKDSNLSP 189 (200)
Q Consensus 134 ------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~-----------------~~~~~Y~~sK~~~E~~ 189 (200)
++...+++|+.++.+++++|++.+ ++||++|| ..||... .+.+.|+.+|.++|++
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~ 159 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV 159 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence 345678999999999999999887 79999999 4565311 1234799999999999
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++.+
T Consensus 160 ~~~~ 163 (347)
T PRK11908 160 IWAY 163 (347)
T ss_pred HHHH
Confidence 9864
No 18
>PLN02650 dihydroflavonol-4-reductase
Probab=99.88 E-value=8.8e-22 Score=162.80 Aligned_cols=139 Identities=21% Similarity=0.309 Sum_probs=111.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--c-----cCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--D-----SWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
..++||||||+||||++++++|+++|++|++++|+...... . ....+++++.+|++|++.++++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 46799999999999999999999999999999987543211 0 0113578999999999999999999999999
Q ss_pred ccccCC----CC-cccchhhHHHHHHHHHHHHHcC-CCEEEEEecc-ccCcC--------C-------------cCCcch
Q 029008 128 CVGGFG----SN-SYMYKINGTANINAIRAASEKG-VKRFVYISAA-DFGVA--------N-------------YLLQGY 179 (200)
Q Consensus 128 ~ag~~~----~~-~~~~~~n~~~~~~~~~~a~~~~-~~~~v~vSS~-~~~~~--------~-------------~~~~~Y 179 (200)
+|+... .+ ...+++|+.++.+++++|.+.+ +++|||+||. .|+.. + .+.++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY 163 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence 998542 12 3578999999999999999877 7899999995 33311 0 012479
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
+.||.++|++++.+
T Consensus 164 ~~sK~~~E~~~~~~ 177 (351)
T PLN02650 164 FVSKTLAEKAAWKY 177 (351)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 19
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.88 E-value=8.5e-22 Score=163.05 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=109.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c-cCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
+.+++|+||||+||||++++++|+++|++|++++|+...... . ....+++++.+|++|.+.+.++++++|+|||+|
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 456799999999999999999999999999999887543211 0 112468899999999999999999999999999
Q ss_pred ccCCC--------Ccc-----cchhhHHHHHHHHHHHHHcC-CCEEEEEec-cccCcCC---------------------
Q 029008 130 GGFGS--------NSY-----MYKINGTANINAIRAASEKG-VKRFVYISA-ADFGVAN--------------------- 173 (200)
Q Consensus 130 g~~~~--------~~~-----~~~~n~~~~~~~~~~a~~~~-~~~~v~vSS-~~~~~~~--------------------- 173 (200)
+.... +.. .+++|+.++.+++++|.+.+ +++||++|| ..|+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~ 167 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW 167 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence 86421 122 23445699999999998875 789999999 5565210
Q ss_pred ---cCCcchhhhHHhhHHHHHhh
Q 029008 174 ---YLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 174 ---~~~~~Y~~sK~~~E~~~~~~ 193 (200)
++.++|+.||.++|++++.+
T Consensus 168 ~~~~~~~~Y~~sK~~~E~~~~~~ 190 (353)
T PLN02896 168 NTKASGWVYVLSKLLTEEAAFKY 190 (353)
T ss_pred ccCCCCccHHHHHHHHHHHHHHH
Confidence 02247999999999999875
No 20
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.88 E-value=6.6e-22 Score=160.34 Aligned_cols=127 Identities=19% Similarity=0.175 Sum_probs=104.0
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccCCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFGS 134 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~~~ 134 (200)
|+||||||+||||++++++|+++| +|++++|... .+.+|++|++.+.++++ ++|+|||+|+....
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~ 67 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV 67 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence 479999999999999999999999 7988887531 24579999999999988 58999999996532
Q ss_pred ------CcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC----------CcCCcchhhhHHhhHHHHHhhccCc
Q 029008 135 ------NSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKDSNLSPLLACYSLC 197 (200)
Q Consensus 135 ------~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~----------~~~~~~Y~~sK~~~E~~~~~~~~~~ 197 (200)
+...+++|+.++.+++++|++.|+ +||++|| .+|+.. ..|.+.|+.+|.++|++++.+.+.+
T Consensus 68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~ 146 (299)
T PRK09987 68 DKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAKH 146 (299)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence 234568999999999999999886 7999998 455422 2355789999999999998865443
No 21
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.87 E-value=7.4e-22 Score=151.62 Aligned_cols=138 Identities=14% Similarity=0.088 Sum_probs=113.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCC-CCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA-NNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
.+|.++||||+++||.++++.|.++|++|++..|+.++..+ .... ..+.++..|++|.++++.+++ ++|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 45899999999999999999999999999999999876322 1112 468999999999988666554 5899
Q ss_pred EEEccccC----------CCCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGF----------GSNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~----------~~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
+|||||.. ++|+.++++|+.|.++..++. .+++.++||++||...-.+-+..+.|+++|+++.++.
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs 164 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFS 164 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHH
Confidence 99999953 257889999999999877765 5566679999999765566677789999999999887
Q ss_pred Hh
Q 029008 191 LA 192 (200)
Q Consensus 191 ~~ 192 (200)
+.
T Consensus 165 ~~ 166 (246)
T COG4221 165 LG 166 (246)
T ss_pred HH
Confidence 65
No 22
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.87 E-value=2e-21 Score=158.88 Aligned_cols=139 Identities=19% Similarity=0.249 Sum_probs=110.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----c--cCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----D--SWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~--~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
.+|+++||||+||||++++++|+++|++|++++|+...... . ....+++++.+|++|++.++++++++|+|||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 46899999999999999999999999999998887653211 0 1124688999999999999999999999999
Q ss_pred ccccCC------CCcccchhhHHHHHHHHHHHHHc-CCCEEEEEecc-ccCcCC---------------c------CCcc
Q 029008 128 CVGGFG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGVAN---------------Y------LLQG 178 (200)
Q Consensus 128 ~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~-~~~~~~---------------~------~~~~ 178 (200)
|||... .+...+++|+.++.+++++|.+. +.++||++||. .|+.+. . +.++
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 999532 23456789999999999999875 57899999994 332210 0 1257
Q ss_pred hhhhHHhhHHHHHhh
Q 029008 179 YYEGKDSNLSPLLAC 193 (200)
Q Consensus 179 Y~~sK~~~E~~~~~~ 193 (200)
|+.+|.++|++++.+
T Consensus 164 Y~~sK~~~E~~~~~~ 178 (325)
T PLN02989 164 YVLSKTLAEDAAWRF 178 (325)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999999998864
No 23
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.87 E-value=2.2e-21 Score=160.41 Aligned_cols=139 Identities=19% Similarity=0.176 Sum_probs=112.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc---c-CCCCeeEEEccCCCHHHHHHHhcC--CCEEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---S-WANNVIWHQGNLLSSDSWKEALDG--VTAVISC 128 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~~ 128 (200)
++|+|+||||+||||+++++.|+++|++|++++|+....... . ...++.++.+|++|++.+.+++++ +|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 568999999999999999999999999999999876542111 1 123577899999999999999885 6999999
Q ss_pred cccC------CCCcccchhhHHHHHHHHHHHHHcC-CCEEEEEec-cccCcC-----------CcCCcchhhhHHhhHHH
Q 029008 129 VGGF------GSNSYMYKINGTANINAIRAASEKG-VKRFVYISA-ADFGVA-----------NYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 129 ag~~------~~~~~~~~~n~~~~~~~~~~a~~~~-~~~~v~vSS-~~~~~~-----------~~~~~~Y~~sK~~~E~~ 189 (200)
||.. .++...+++|+.++.++++++.+.+ +++||++|| ..|+.+ ..+.+.|+.+|.++|.+
T Consensus 83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~ 162 (349)
T TIGR02622 83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV 162 (349)
T ss_pred CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence 9843 1345678999999999999998876 789999999 456532 13467899999999999
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++.+
T Consensus 163 ~~~~ 166 (349)
T TIGR02622 163 IASY 166 (349)
T ss_pred HHHH
Confidence 8764
No 24
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.87 E-value=2e-21 Score=154.15 Aligned_cols=138 Identities=21% Similarity=0.322 Sum_probs=118.1
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccC--CCCeeEEEccCCCHHHHHHHhc--CCCEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW--ANNVIWHQGNLLSSDSWKEALD--GVTAV 125 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~--~~~~~~~~~Dl~d~~~~~~~~~--~~d~v 125 (200)
.++||||||+||||++.+.+|+++|+.|++++.-.....+ ... ...+.++.+|++|.+.++++|+ .+|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 5799999999999999999999999999999875443211 112 3689999999999999999998 58999
Q ss_pred EEccccC------CCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC-----------cCCcchhhhHHhhH
Q 029008 126 ISCVGGF------GSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------YLLQGYYEGKDSNL 187 (200)
Q Consensus 126 i~~ag~~------~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~-----------~~~~~Y~~sK~~~E 187 (200)
+|.|+.. ..+...+..|+.|++++++.+++++++.+||.|| ..||.+. .|.++|+++|.++|
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE 161 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE 161 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence 9999853 3567788999999999999999999999999999 5688653 47889999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
++++..
T Consensus 162 ~i~~d~ 167 (343)
T KOG1371|consen 162 EIIHDY 167 (343)
T ss_pred HHHHhh
Confidence 999975
No 25
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.87 E-value=1.9e-21 Score=172.82 Aligned_cols=139 Identities=18% Similarity=0.223 Sum_probs=110.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHC-CCcEEEeecCCCCcccccCCCCeeEEEccCCCHHH-HHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS-WKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d~vi~~ag~ 131 (200)
..+|+|+||||+||||++|+++|+++ |++|++++|............+++++.+|++|.+. ++++++++|+|||+||.
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~ 392 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI 392 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence 35789999999999999999999986 79999999876432211122478999999998655 57788999999999985
Q ss_pred CC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC-----------------cCCcchhhhHHhhH
Q 029008 132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN-----------------YLLQGYYEGKDSNL 187 (200)
Q Consensus 132 ~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~-----------------~~~~~Y~~sK~~~E 187 (200)
.. .+...+++|+.++.+++++|++.+ ++|||+|| ..||... .+.+.|+.||.++|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E 471 (660)
T PRK08125 393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD 471 (660)
T ss_pred cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence 43 234577899999999999999988 79999999 4566321 12247999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
++++.+
T Consensus 472 ~~~~~~ 477 (660)
T PRK08125 472 RVIWAY 477 (660)
T ss_pred HHHHHH
Confidence 999875
No 26
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.87 E-value=3.2e-21 Score=156.39 Aligned_cols=135 Identities=29% Similarity=0.302 Sum_probs=110.7
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCC-CEEEEccccCCCC-
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV-TAVISCVGGFGSN- 135 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-d~vi~~ag~~~~~- 135 (200)
+||||||+||||++|+++|+++|++|++++|......... ..+.++.+|++|.+.+.+.++.+ |+|||+|+....+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~ 79 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD 79 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence 4999999999999999999999999999999766533222 57899999999998888888888 9999999965422
Q ss_pred ------cccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcC------------CcCCcchhhhHHhhHHHHHhhc
Q 029008 136 ------SYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA------------NYLLQGYYEGKDSNLSPLLACY 194 (200)
Q Consensus 136 ------~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~------------~~~~~~Y~~sK~~~E~~~~~~~ 194 (200)
...+++|+.++.+++++|++.++++||+.||. .++.. ..|.+.|+.+|.++|++++.+.
T Consensus 80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~ 157 (314)
T COG0451 80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYA 157 (314)
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 23789999999999999999999999997773 33321 1223359999999999999864
No 27
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.87 E-value=3.6e-21 Score=159.22 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=107.0
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC-cc-c---cc-CCCCeeEEEccCCCHHHHHHHhcC--CCEEEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS-SL-R---DS-WANNVIWHQGNLLSSDSWKEALDG--VTAVIS 127 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~---~~-~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~ 127 (200)
|++|+||||+||||+++++.|+++|++++++.++... .. . .. ...++.++.+|++|++.+++++++ +|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 4789999999999999999999999886554433221 10 0 10 123578899999999999999984 899999
Q ss_pred ccccCC------CCcccchhhHHHHHHHHHHHHH---------cCCCEEEEEec-cccCcC------------CcCCcch
Q 029008 128 CVGGFG------SNSYMYKINGTANINAIRAASE---------KGVKRFVYISA-ADFGVA------------NYLLQGY 179 (200)
Q Consensus 128 ~ag~~~------~~~~~~~~n~~~~~~~~~~a~~---------~~~~~~v~vSS-~~~~~~------------~~~~~~Y 179 (200)
+||... .+...+++|+.++.+++++|.+ .++++||++|| ..|+.. ..+.+.|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence 998643 3356789999999999999976 24679999999 456631 2356789
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
+.||.++|.+++.+
T Consensus 161 ~~sK~~~e~~~~~~ 174 (355)
T PRK10217 161 SASKASSDHLVRAW 174 (355)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 28
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.9e-21 Score=164.13 Aligned_cols=138 Identities=24% Similarity=0.243 Sum_probs=119.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCccc------cc-CCCCeeEEEccCCCHHHHHHHhcC--CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALDG--VT 123 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~-~~~~~~~~~~Dl~d~~~~~~~~~~--~d 123 (200)
..+|+|+||||+|.+|+.+++++++.+. ++++++|++..... .. ...+..++-+|+.|.+.+++++++ +|
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence 4689999999999999999999999985 77777877644211 11 135789999999999999999998 99
Q ss_pred EEEEccccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhhc
Q 029008 124 AVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLACY 194 (200)
Q Consensus 124 ~vi~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~~ 194 (200)
+|||.|+.-+ .+.+.+++|+.|+.|++++|.++|+++||++|| ++.-.|.+.||+||..+|.++..+.
T Consensus 328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST---DKAV~PtNvmGaTKr~aE~~~~a~~ 401 (588)
T COG1086 328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST---DKAVNPTNVMGATKRLAEKLFQAAN 401 (588)
T ss_pred eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec---CcccCCchHhhHHHHHHHHHHHHHh
Confidence 9999999643 567788999999999999999999999999999 6777889999999999999999763
No 29
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.86 E-value=9.4e-21 Score=154.58 Aligned_cols=136 Identities=31% Similarity=0.412 Sum_probs=112.6
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCC---
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG--- 133 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~--- 133 (200)
|+|+||||+|+||.++++.|+++|++|++++|+.+... .....+++++.+|+.|++++.++++++|+|||+++...
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~ 79 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-NLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA 79 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc-ccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence 47999999999999999999999999999999765421 12223688999999999999999999999999998532
Q ss_pred -CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC-C----------c---CCcchhhhHHhhHHHHHhh
Q 029008 134 -SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA-N----------Y---LLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 134 -~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~-~----------~---~~~~Y~~sK~~~E~~~~~~ 193 (200)
.+...+++|+.++.++++++.+.++++||++|| ..|+.. . . ....|+.+|.+.|++++++
T Consensus 80 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 80 PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999 445531 1 0 1357999999999999875
No 30
>PLN02240 UDP-glucose 4-epimerase
Probab=99.86 E-value=1e-20 Score=156.24 Aligned_cols=140 Identities=23% Similarity=0.317 Sum_probs=112.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc------cc---cCCCCeeEEEccCCCHHHHHHHhc--CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RD---SWANNVIWHQGNLLSSDSWKEALD--GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~---~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 122 (200)
.++++|+||||+|++|.+++++|+++|++|++++|...... .. ....+++++.+|++|++.+..+++ ++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999987543210 00 112468899999999999999886 68
Q ss_pred CEEEEccccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcCC----------cCCcchhhhHHh
Q 029008 123 TAVISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKDS 185 (200)
Q Consensus 123 d~vi~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~~----------~~~~~Y~~sK~~ 185 (200)
|+|||+||... .+...+++|+.++.+++++|.+.++++||++||. .|+... .+...|+.+|.+
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~ 162 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLF 162 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 99999998532 2345789999999999999999899999999994 465321 245789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
+|++++++
T Consensus 163 ~e~~~~~~ 170 (352)
T PLN02240 163 IEEICRDI 170 (352)
T ss_pred HHHHHHHH
Confidence 99999753
No 31
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.86 E-value=1.2e-20 Score=154.92 Aligned_cols=137 Identities=23% Similarity=0.294 Sum_probs=109.9
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD--GVTAVISC 128 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ 128 (200)
|+|+||||+|+||.+++++|+++|++|++++|....... .....++.++.+|++|++.+.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 479999999999999999999999999998765332111 1112357789999999999999886 58999999
Q ss_pred cccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcCC-----------cCCcchhhhHHhhHHHH
Q 029008 129 VGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 129 ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~~-----------~~~~~Y~~sK~~~E~~~ 190 (200)
||... .+...+++|+.++.+++++|++.++++||++||. .|+... .+.+.|+.+|.++|+++
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~ 160 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence 98543 2245678999999999999999999999999994 465321 35688999999999999
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+++
T Consensus 161 ~~~ 163 (338)
T PRK10675 161 TDL 163 (338)
T ss_pred HHH
Confidence 864
No 32
>PLN02686 cinnamoyl-CoA reductase
Probab=99.85 E-value=6.5e-21 Score=158.65 Aligned_cols=141 Identities=20% Similarity=0.221 Sum_probs=111.5
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--cc--------CCCCeeEEEccCCCHHHHHHHhcCC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DS--------WANNVIWHQGNLLSSDSWKEALDGV 122 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~ 122 (200)
..++|+|+||||+||||++++++|+++|++|+++.|+.+.... .. ...++.++.+|++|++.+.++++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 3467899999999999999999999999999998886433111 00 0125789999999999999999999
Q ss_pred CEEEEccccCCC------CcccchhhHHHHHHHHHHHHHc-CCCEEEEEecc---ccCc--CC-----------------
Q 029008 123 TAVISCVGGFGS------NSYMYKINGTANINAIRAASEK-GVKRFVYISAA---DFGV--AN----------------- 173 (200)
Q Consensus 123 d~vi~~ag~~~~------~~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~---~~~~--~~----------------- 173 (200)
|.|||+++.... +....++|+.++.+++++|.+. ++++||++||. .|+. +.
T Consensus 130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~ 209 (367)
T PLN02686 130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFC 209 (367)
T ss_pred cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhc
Confidence 999999986432 2456688999999999999886 79999999994 3432 10
Q ss_pred -cCCcchhhhHHhhHHHHHhh
Q 029008 174 -YLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 174 -~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.+.++|+.+|.++|++++.+
T Consensus 210 ~~p~~~Y~~sK~~~E~~~~~~ 230 (367)
T PLN02686 210 RDNKLWYALGKLKAEKAAWRA 230 (367)
T ss_pred ccccchHHHHHHHHHHHHHHH
Confidence 12357999999999998764
No 33
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.85 E-value=6e-21 Score=152.70 Aligned_cols=138 Identities=21% Similarity=0.142 Sum_probs=109.7
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
.|+++||||+|+||++++++|+++|++|+++.|+.+.... .....++.++.+|++|.+++.++++ ++|+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999999999999999999999999999997543211 1123478899999999998887664 479999
Q ss_pred EccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
||+|... .++..+++|+.++.++++++ ++.+.++||++||.....+.++.+.|+.+|+++|.+++.
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 161 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA 161 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence 9998642 12346789999999999997 555678999999954333445678999999999998876
Q ss_pred h
Q 029008 193 C 193 (200)
Q Consensus 193 ~ 193 (200)
+
T Consensus 162 l 162 (276)
T PRK06482 162 V 162 (276)
T ss_pred H
Confidence 4
No 34
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.85 E-value=2.4e-21 Score=154.07 Aligned_cols=132 Identities=22% Similarity=0.186 Sum_probs=101.4
Q ss_pred EEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCccc---cc----CCCCee----EEEccCCCHHHHHHHhc--CCCE
Q 029008 59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR---DS----WANNVI----WHQGNLLSSDSWKEALD--GVTA 124 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~----~~~~~~----~~~~Dl~d~~~~~~~~~--~~d~ 124 (200)
||||||+|.||+.|+++|++.+. +++++++++..... .. ...++. .+.+|+.|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999984 79999998654211 11 122343 45899999999999999 8999
Q ss_pred EEEccccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 125 VISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 125 vi~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
|||.|+.-+ .+...+++|+.|+.+++++|.++++++||++|| +..-.|.+.||+||..+|.++...
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST---DKAv~PtnvmGatKrlaE~l~~~~ 152 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST---DKAVNPTNVMGATKRLAEKLVQAA 152 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE---CGCSS--SHHHHHHHHHHHHHHHH
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc---cccCCCCcHHHHHHHHHHHHHHHH
Confidence 999999632 556788999999999999999999999999999 667778899999999999999975
No 35
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.85 E-value=6.7e-21 Score=149.81 Aligned_cols=139 Identities=17% Similarity=0.156 Sum_probs=112.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc------cccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
.++++++||||+++||.+++++|+++|++|+++.|+.++.. +......+.++.+|++|++++..+.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999999987521 12223478899999999999988764
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHH----HHHcCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~----a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
.+|++|||||... ....++++|+.+...+..+ +.+++.++||+++|...-.+.+..+.|++||+++
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v 163 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV 163 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHH
Confidence 4899999999532 2246789999888766555 4566778999999966556667788999999998
Q ss_pred HHHHHh
Q 029008 187 LSPLLA 192 (200)
Q Consensus 187 E~~~~~ 192 (200)
-.+.+.
T Consensus 164 ~~fSea 169 (265)
T COG0300 164 LSFSEA 169 (265)
T ss_pred HHHHHH
Confidence 877664
No 36
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.85 E-value=1.3e-20 Score=149.30 Aligned_cols=140 Identities=16% Similarity=0.122 Sum_probs=111.5
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCC-CeeEEEccCCCHHHHHHHhc-----
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWAN-NVIWHQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~-~~~~~~~Dl~d~~~~~~~~~----- 120 (200)
...+|+|+||||+++||.+++.+|+++|.+++.+.|...+... ..... ++.++++|++|.+++++.++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999998888887655221 11223 59999999999999997653
Q ss_pred --CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
++|++|||||... +....+++|+.|+..+.+++ ++.+-++||.+||..+-.+-+....|++||+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~ 168 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKH 168 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHH
Confidence 6899999999643 12457899999999888776 4445579999999654455555569999999
Q ss_pred hhHHHHHh
Q 029008 185 SNLSPLLA 192 (200)
Q Consensus 185 ~~E~~~~~ 192 (200)
+++.+...
T Consensus 169 Al~~f~et 176 (282)
T KOG1205|consen 169 ALEGFFET 176 (282)
T ss_pred HHHHHHHH
Confidence 99998775
No 37
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.85 E-value=5.8e-20 Score=154.03 Aligned_cols=138 Identities=26% Similarity=0.345 Sum_probs=113.1
Q ss_pred CCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHHHHHhc----
Q 029008 52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD---- 120 (200)
Q Consensus 52 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~---- 120 (200)
....+++|+||||+|+||++++++|+++|++|++++|+...... .....+++++.+|++|++++.++++
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 33567899999999999999999999999999999998643210 0113478999999999999999987
Q ss_pred CCCEEEEccccCC-CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 121 GVTAVISCVGGFG-SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 121 ~~d~vi~~ag~~~-~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
++|+||||++... .....+++|+.++.++++++++.|+++||++||... ..+...|..+|...|+.++.
T Consensus 136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v---~~p~~~~~~sK~~~E~~l~~ 205 (390)
T PLN02657 136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICV---QKPLLEFQRAKLKFEAELQA 205 (390)
T ss_pred CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccc---cCcchHHHHHHHHHHHHHHh
Confidence 5999999988532 235568899999999999999999999999999532 13456789999999998875
No 38
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.84 E-value=1.3e-20 Score=146.87 Aligned_cols=136 Identities=29% Similarity=0.384 Sum_probs=114.2
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCC--CEEEEccccCC---
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV--TAVISCVGGFG--- 133 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~ag~~~--- 133 (200)
|+||||+||||.+++++|+++|+.|+.+.|+...........+++++.+|+.|.+.++++++.. |+|||+|+...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 7999999999999999999999999999988766432221238999999999999999999865 99999999752
Q ss_pred ---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcCC----------cCCcchhhhHHhhHHHHHhhc
Q 029008 134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN----------YLLQGYYEGKDSNLSPLLACY 194 (200)
Q Consensus 134 ---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~~----------~~~~~Y~~sK~~~E~~~~~~~ 194 (200)
.....++.|+.++.++++++.+.+++++|++||. .|+... .+.+.|+.+|...|++++.+.
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~ 155 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYA 155 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3456788999999999999999999999999994 566542 245789999999999998753
No 39
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.84 E-value=1.7e-20 Score=159.09 Aligned_cols=134 Identities=20% Similarity=0.196 Sum_probs=104.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..++|+||||+||||++|+++|+++|++|++++|....... .....+++++.+|+.+.. +.++|+|||+|+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~~~~D~ViHlAa 193 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----LLEVDQIYHLAC 193 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----ccCCCEEEECce
Confidence 45799999999999999999999999999999985322111 111236788888987653 468999999998
Q ss_pred cCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC---------------CcCCcchhhhHHhhHH
Q 029008 131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA---------------NYLLQGYYEGKDSNLS 188 (200)
Q Consensus 131 ~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~---------------~~~~~~Y~~sK~~~E~ 188 (200)
... ++...+++|+.++.+++++|++.++ +||++|| .+||.+ ..+.+.|+.+|.++|+
T Consensus 194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~ 272 (436)
T PLN02166 194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET 272 (436)
T ss_pred eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence 532 2345678999999999999999886 8999998 457642 1124679999999999
Q ss_pred HHHhhc
Q 029008 189 PLLACY 194 (200)
Q Consensus 189 ~~~~~~ 194 (200)
+++.+.
T Consensus 273 ~~~~y~ 278 (436)
T PLN02166 273 LAMDYH 278 (436)
T ss_pred HHHHHH
Confidence 998763
No 40
>PLN02583 cinnamoyl-CoA reductase
Probab=99.84 E-value=4.5e-20 Score=149.46 Aligned_cols=139 Identities=19% Similarity=0.228 Sum_probs=109.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc-----ccc--CCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-----RDS--WANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
.+++|+||||+|+||++++++|+++|++|++++|+..... ... ...+++++.+|++|.+.+.+++.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 4579999999999999999999999999999998643211 111 124688999999999999999999999999
Q ss_pred ccccCCC----CcccchhhHHHHHHHHHHHHHc-CCCEEEEEecc-c--cCcCC---------cC----------Ccchh
Q 029008 128 CVGGFGS----NSYMYKINGTANINAIRAASEK-GVKRFVYISAA-D--FGVAN---------YL----------LQGYY 180 (200)
Q Consensus 128 ~ag~~~~----~~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~-~--~~~~~---------~~----------~~~Y~ 180 (200)
.++.... ++..+++|+.++.+++++|.+. ++++||++||. . ++.+. .. ...|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 8765432 3567899999999999999886 58899999994 2 23110 00 11699
Q ss_pred hhHHhhHHHHHhh
Q 029008 181 EGKDSNLSPLLAC 193 (200)
Q Consensus 181 ~sK~~~E~~~~~~ 193 (200)
.||..+|++++++
T Consensus 165 ~sK~~aE~~~~~~ 177 (297)
T PLN02583 165 LAKTLSEKTAWAL 177 (297)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999654
No 41
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.4e-20 Score=150.81 Aligned_cols=137 Identities=15% Similarity=0.023 Sum_probs=107.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--------CCCEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAVI 126 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~d~vi 126 (200)
++++++||||+|+||.+++++|+++|++|++++|+.+...+ ....+++++.+|++|+++++++++ .+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-LEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 46799999999999999999999999999999998654221 112367889999999988877654 479999
Q ss_pred EccccCC----------CCcccchhhHHHHH----HHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 127 SCVGGFG----------SNSYMYKINGTANI----NAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 127 ~~ag~~~----------~~~~~~~~n~~~~~----~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
||||... .+...+++|+.+.. .+++.+++.+.++||++||...-.+.++...|+.+|+++|.+++.
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~ 161 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLT 161 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHH
Confidence 9998532 12346889999954 456666677778999999954334556678999999999998875
No 42
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.84 E-value=7.4e-21 Score=150.42 Aligned_cols=134 Identities=26% Similarity=0.358 Sum_probs=94.0
Q ss_pred EEccCchhHHHHHHHHHHCCC--cEEEeecCCCCcc--c-------------c---cCCCCeeEEEccCCCH------HH
Q 029008 61 VLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL--R-------------D---SWANNVIWHQGNLLSS------DS 114 (200)
Q Consensus 61 VtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~-------------~---~~~~~~~~~~~Dl~d~------~~ 114 (200)
|||||||+|.+|+++|++++. +|+|+.|..+... + . ....+++++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999987 8999999864310 0 0 0157999999999875 56
Q ss_pred HHHHhcCCCEEEEccccCC---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccc-cCcC------------------
Q 029008 115 WKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAAD-FGVA------------------ 172 (200)
Q Consensus 115 ~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~-~~~~------------------ 172 (200)
++.+.+++|+|||||+..+ +....+++|+.|+.++++.|.+.+.++|+|+||+. .+..
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 7788889999999999754 44668899999999999999977777999999942 1111
Q ss_pred -CcCCcchhhhHHhhHHHHHhhc
Q 029008 173 -NYLLQGYYEGKDSNLSPLLACY 194 (200)
Q Consensus 173 -~~~~~~Y~~sK~~~E~~~~~~~ 194 (200)
....++|.+||+.+|+++++++
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~ 183 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAA 183 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHH
T ss_pred hccCCccHHHHHHHHHHHHHHHH
Confidence 1234689999999999999874
No 43
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.84 E-value=3e-20 Score=148.16 Aligned_cols=135 Identities=17% Similarity=0.117 Sum_probs=109.4
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEEEc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC 128 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~ 128 (200)
+++++||||+|+||.+++++|+++|++|++++|+.+.... ..+++++.+|++|+++++++++ .+|+||||
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 4689999999999999999999999999999998654321 3478899999999999998876 37999999
Q ss_pred cccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 129 VGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 129 ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
+|... .++..+++|+.++.++++++ ++.+.++||++||...-.+.+....|+.+|+++|.+++..
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 159 (270)
T PRK06179 81 AGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESL 159 (270)
T ss_pred CCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHH
Confidence 99642 23557899999999888874 5567889999999532234455678999999999987763
No 44
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.2e-20 Score=148.07 Aligned_cols=139 Identities=12% Similarity=0.062 Sum_probs=109.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
++++++||||+|+||++++++|+++|++|++++|+.+.... .....++.++.+|++|++++.++++ ++|+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 35789999999999999999999999999999997654211 1123468889999999999888776 47999
Q ss_pred EEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 126 ISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
|||+|... .+...+++|+.++.++++++. +.+.++||++||...-.+.++...|+.+|+++|.+++
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~ 162 (277)
T PRK06180 83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISE 162 (277)
T ss_pred EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHH
Confidence 99999642 123458999999999998853 4456799999995433345567899999999999887
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
..
T Consensus 163 ~l 164 (277)
T PRK06180 163 SL 164 (277)
T ss_pred HH
Confidence 63
No 45
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.84 E-value=2.9e-20 Score=157.90 Aligned_cols=133 Identities=21% Similarity=0.234 Sum_probs=103.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..|+|+||||+||||++|+++|+++|++|++++|......+ .....+++++.+|+.++. +.++|+|||+|+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHlAa 192 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHLAC 192 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEEeee
Confidence 45799999999999999999999999999999875322111 112346788899987653 457999999998
Q ss_pred cCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC---------------cCCcchhhhHHhhHH
Q 029008 131 GFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------------YLLQGYYEGKDSNLS 188 (200)
Q Consensus 131 ~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~---------------~~~~~Y~~sK~~~E~ 188 (200)
... ++...+++|+.++.+++++|++.++ +||++|| ..|+... .+.+.|+.+|.++|+
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~ 271 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET 271 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence 532 3355778999999999999999886 8999999 4575321 124679999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
++..+
T Consensus 272 ~~~~y 276 (442)
T PLN02206 272 LTMDY 276 (442)
T ss_pred HHHHH
Confidence 99864
No 46
>PRK06398 aldose dehydrogenase; Validated
Probab=99.84 E-value=7.3e-20 Score=145.28 Aligned_cols=133 Identities=12% Similarity=0.124 Sum_probs=109.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~ 127 (200)
++|+++||||+|+||.+++++|+++|++|++++|+.... .++.++.+|++|+++++++++ ++|++||
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 568999999999999999999999999999999875442 368899999999998887765 5899999
Q ss_pred ccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 128 CVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 128 ~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
|||... .++..+++|+.+++.+++++.+ .+.++||++||.....+.++...|+.+|++++.+.+..
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~l 158 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSI 158 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHH
Confidence 998532 2345679999999988887743 45679999999543445567789999999999998864
No 47
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.84 E-value=5e-20 Score=164.06 Aligned_cols=139 Identities=18% Similarity=0.314 Sum_probs=110.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHC--CCcEEEeecCCCC-ccc----ccCCCCeeEEEccCCCHHHHHHHh--cCCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDR--GLTVASLSRSGRS-SLR----DSWANNVIWHQGNLLSSDSWKEAL--DGVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~v 125 (200)
.+|+||||||+||||++++++|+++ |++|++++|.... ... .....+++++.+|++|.+.+..++ .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 5689999999999999999999998 6889998875311 000 111347899999999999888766 579999
Q ss_pred EEccccCC------CCcccchhhHHHHHHHHHHHHHcC-CCEEEEEec-cccCcCC-------------cCCcchhhhHH
Q 029008 126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKG-VKRFVYISA-ADFGVAN-------------YLLQGYYEGKD 184 (200)
Q Consensus 126 i~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~-~~~~v~vSS-~~~~~~~-------------~~~~~Y~~sK~ 184 (200)
||+|+... .+...+++|+.++.+++++|++.+ +++||++|| ..||... .|.+.|+.+|.
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~ 164 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKA 164 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHH
Confidence 99999643 223567899999999999999887 889999999 4565421 24578999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
++|++++.+
T Consensus 165 ~aE~~v~~~ 173 (668)
T PLN02260 165 GAEMLVMAY 173 (668)
T ss_pred HHHHHHHHH
Confidence 999999864
No 48
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.84 E-value=5.9e-20 Score=151.82 Aligned_cols=137 Identities=20% Similarity=0.235 Sum_probs=105.7
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCc-EEEeecCCC-Cc---cccc-CCCCeeEEEccCCCHHHHHHHhc--CCCEEEEc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGR-SS---LRDS-WANNVIWHQGNLLSSDSWKEALD--GVTAVISC 128 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~-~~---~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ 128 (200)
|+|+||||+||||.+++++|+++|++ |+++++... .. .... ...+++++.+|++|.+++.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999986 554554321 11 0111 12357889999999999999987 48999999
Q ss_pred cccCC------CCcccchhhHHHHHHHHHHHHHc---------CCCEEEEEec-cccCcC--------------------
Q 029008 129 VGGFG------SNSYMYKINGTANINAIRAASEK---------GVKRFVYISA-ADFGVA-------------------- 172 (200)
Q Consensus 129 ag~~~------~~~~~~~~n~~~~~~~~~~a~~~---------~~~~~v~vSS-~~~~~~-------------------- 172 (200)
||... .+...+++|+.++.+++++|.+. ++++||++|| ..|+..
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA 160 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence 98642 34678899999999999999864 4568999999 456631
Q ss_pred CcCCcchhhhHHhhHHHHHhh
Q 029008 173 NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 173 ~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
..|.+.|+.+|.++|.+++.+
T Consensus 161 ~~p~~~Y~~sK~~~E~~~~~~ 181 (352)
T PRK10084 161 YAPSSPYSASKASSDHLVRAW 181 (352)
T ss_pred CCCCChhHHHHHHHHHHHHHH
Confidence 134578999999999998864
No 49
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.83 E-value=1.8e-20 Score=151.11 Aligned_cols=126 Identities=27% Similarity=0.355 Sum_probs=97.8
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccCC-
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG- 133 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~~- 133 (200)
|+|||||++|+||++|.+.|.++|++|+.+.|. ..|+.|.+.+.+.++ ++|+||||||...
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~ 64 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV 64 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence 689999999999999999999999999998766 468999999999887 4899999998754
Q ss_pred -----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCc----------CCcCCcchhhhHHhhHHHHHhhccCc
Q 029008 134 -----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------ANYLLQGYYEGKDSNLSPLLACYSLC 197 (200)
Q Consensus 134 -----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~----------~~~~~~~Y~~sK~~~E~~~~~~~~~~ 197 (200)
.++..+++|+.++.+++++|.+.|. ++||+|| .+|+- +..|.+.||.+|.++|+.+++.++.+
T Consensus 65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~ 143 (286)
T PF04321_consen 65 DACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNA 143 (286)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSE
T ss_pred HhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCE
Confidence 4567899999999999999999886 8999999 44421 22467899999999999999977766
Q ss_pred cc
Q 029008 198 CL 199 (200)
Q Consensus 198 ~~ 199 (200)
.|
T Consensus 144 ~I 145 (286)
T PF04321_consen 144 LI 145 (286)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 50
>PRK06194 hypothetical protein; Provisional
Probab=99.83 E-value=5e-20 Score=148.08 Aligned_cols=139 Identities=13% Similarity=0.066 Sum_probs=107.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+++++||||+|+||++++++|+++|++|++++|+.+...+ . ....++.++.+|++|.++++++++ ++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 45799999999999999999999999999999987543111 1 112367889999999999988776 47
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCC------CEEEEEeccccCcCCcCCcchhhh
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGV------KRFVYISAADFGVANYLLQGYYEG 182 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~------~~~v~vSS~~~~~~~~~~~~Y~~s 182 (200)
|+||||||... .++..+++|+.++.++++++ .+.+. +++|++||.....+.++...|+.+
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 164 (287)
T PRK06194 85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVS 164 (287)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHH
Confidence 99999999642 12345789999999877774 44443 589999995433344566789999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|++.|.+++..
T Consensus 165 K~a~~~~~~~l 175 (287)
T PRK06194 165 KHAVVSLTETL 175 (287)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 51
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=5.8e-20 Score=148.89 Aligned_cols=138 Identities=24% Similarity=0.291 Sum_probs=113.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcc---------------cccCCCCeeEEEccCC------CHHH
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL---------------RDSWANNVIWHQGNLL------SSDS 114 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~---------------~~~~~~~~~~~~~Dl~------d~~~ 114 (200)
+++++||||||+|.+++.+|+.+- .+|+|++|..+.+. .+.+..+++++.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999875 49999999876421 1234578999999996 4577
Q ss_pred HHHHhcCCCEEEEccccCC---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcC-------------------
Q 029008 115 WKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVA------------------- 172 (200)
Q Consensus 115 ~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~------------------- 172 (200)
++.+.+.+|.||||++..+ +.......|+.|+..+++.|...+.|.++||||.+.+..
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV 160 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence 8888889999999999654 567888999999999999998888889999999542211
Q ss_pred -CcCCcchhhhHHhhHHHHHhhc
Q 029008 173 -NYLLQGYYEGKDSNLSPLLACY 194 (200)
Q Consensus 173 -~~~~~~Y~~sK~~~E~~~~~~~ 194 (200)
....++|++|||++|.+++++.
T Consensus 161 ~~~~~~GY~~SKwvaE~Lvr~A~ 183 (382)
T COG3320 161 GQGLAGGYGRSKWVAEKLVREAG 183 (382)
T ss_pred cCccCCCcchhHHHHHHHHHHHh
Confidence 1235799999999999999874
No 52
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.1e-19 Score=143.50 Aligned_cols=137 Identities=20% Similarity=0.196 Sum_probs=110.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
.++|+++||||+|+||.+++++|+++|++|++++|+.+.. ....++.++.+|+.|+++++++++ ++|+||
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3578999999999999999999999999999999976441 123468899999999998888775 469999
Q ss_pred EccccCC----------CCcccchhhHHHHHHHHHHHHH----c-CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 127 SCVGGFG----------SNSYMYKINGTANINAIRAASE----K-GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~-~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
||+|... .++..+++|+.++..+++++.+ . +.++||++||.....+.+....|+.+|+++|.+++
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~ 160 (252)
T PRK07856 81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTR 160 (252)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHH
Confidence 9998532 1245689999999999988754 2 34689999996544455667899999999999998
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
..
T Consensus 161 ~l 162 (252)
T PRK07856 161 SL 162 (252)
T ss_pred HH
Confidence 64
No 53
>PRK06182 short chain dehydrogenase; Validated
Probab=99.83 E-value=3.7e-20 Score=147.99 Aligned_cols=136 Identities=17% Similarity=0.058 Sum_probs=106.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEEEc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC 128 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~ 128 (200)
+++++||||+|+||++++++|+++|++|++++|+.++..+ ....+++++.+|++|+++++++++ ++|++|||
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 5799999999999999999999999999999998654221 112458899999999999988776 68999999
Q ss_pred cccCC----------CCcccchhhHHHHHHHHH----HHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 129 VGGFG----------SNSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 129 ag~~~----------~~~~~~~~n~~~~~~~~~----~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
+|... .++..+++|+.+...+++ .+++.+.++||++||.....+.+....|+.+|++.+.+++.
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~ 159 (273)
T PRK06182 82 AGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDA 159 (273)
T ss_pred CCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHH
Confidence 99632 235567899988655544 55666778999999954333344556799999999998764
No 54
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.83 E-value=1e-19 Score=148.55 Aligned_cols=139 Identities=27% Similarity=0.413 Sum_probs=113.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCc---cccc--CCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSS---LRDS--WANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~---~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
++.+++||||+||+|++++++|++++ .+|++++..+... .+.. ....++++.+|+.|...+.+++.++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 46799999999999999999999998 7999998876521 1111 2568999999999999999999999 7788
Q ss_pred ccccC------CCCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccc---cCcC-----------CcCCcchhhhHHhhH
Q 029008 128 CVGGF------GSNSYMYKINGTANINAIRAASEKGVKRFVYISAAD---FGVA-----------NYLLQGYYEGKDSNL 187 (200)
Q Consensus 128 ~ag~~------~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~---~~~~-----------~~~~~~Y~~sK~~~E 187 (200)
||+.. .+.+..+++|+.||.+++++|.+.|++++|++||.. .|.+ ......|+.||+.+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 77642 246778999999999999999999999999999952 1111 122358999999999
Q ss_pred HHHHhhc
Q 029008 188 SPLLACY 194 (200)
Q Consensus 188 ~~~~~~~ 194 (200)
++++++-
T Consensus 162 ~~Vl~an 168 (361)
T KOG1430|consen 162 KLVLEAN 168 (361)
T ss_pred HHHHHhc
Confidence 9999864
No 55
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.83 E-value=8.4e-20 Score=156.88 Aligned_cols=140 Identities=24% Similarity=0.280 Sum_probs=111.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc---c-----------CCCCeeEEEccCCCHHHHHHHh
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---S-----------WANNVIWHQGNLLSSDSWKEAL 119 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~-----------~~~~~~~~~~Dl~d~~~~~~~~ 119 (200)
.++++|+||||+|+||++++++|+++|++|++++|+.++.... . ...+++++.+|+.|.+++.+++
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 4678999999999999999999999999999999986542110 0 0135889999999999999999
Q ss_pred cCCCEEEEccccCC----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccC---cCC---cCCcchhhhHHhhHHH
Q 029008 120 DGVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFG---VAN---YLLQGYYEGKDSNLSP 189 (200)
Q Consensus 120 ~~~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~---~~~---~~~~~Y~~sK~~~E~~ 189 (200)
.++|+||||+|... ++...+++|+.++.++++++.+.++++||++||.... .+. .....|..+|..+|+.
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~ 237 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEA 237 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHH
Confidence 99999999998643 3345678999999999999999999999999995321 111 1234577788899988
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
+...
T Consensus 238 L~~s 241 (576)
T PLN03209 238 LIAS 241 (576)
T ss_pred HHHc
Confidence 8764
No 56
>PRK05717 oxidoreductase; Validated
Probab=99.83 E-value=1.2e-19 Score=143.51 Aligned_cols=141 Identities=11% Similarity=0.049 Sum_probs=109.7
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
..++|+++||||+|+||++++++|+++|++|++++|+..+..+ .....++.++.+|++|++++.++++ .+|
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3567899999999999999999999999999999887543211 1113468899999999988876554 479
Q ss_pred EEEEccccCCC------------CcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFGS------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||+|.... ++..+++|+.+++++++++.+. ..++||++||.....+.+....|+.+|+++|.
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~ 166 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLA 166 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence 99999996431 2357899999999999998642 23689999985433344556789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 167 ~~~~l 171 (255)
T PRK05717 167 LTHAL 171 (255)
T ss_pred HHHHH
Confidence 88864
No 57
>PLN02778 3,5-epimerase/4-reductase
Probab=99.82 E-value=1.3e-19 Score=146.79 Aligned_cols=122 Identities=19% Similarity=0.238 Sum_probs=93.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~ 131 (200)
...|+||||||+||||++|+++|+++|++|+... .|+.|.+.+...++ ++|+|||+||.
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 4557999999999999999999999999987432 24556666766665 68999999996
Q ss_pred CC---------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCc------------C-C----cCCcchhhhHHh
Q 029008 132 FG---------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGV------------A-N----YLLQGYYEGKDS 185 (200)
Q Consensus 132 ~~---------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~------------~-~----~~~~~Y~~sK~~ 185 (200)
.. ++...+++|+.++.+++++|++.+++++++.|+..|+. . + ++.+.|+.+|.+
T Consensus 68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~ 147 (298)
T PLN02778 68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAM 147 (298)
T ss_pred cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHH
Confidence 53 12346789999999999999999987655544444421 0 1 123689999999
Q ss_pred hHHHHHhhc
Q 029008 186 NLSPLLACY 194 (200)
Q Consensus 186 ~E~~~~~~~ 194 (200)
+|.+++.+.
T Consensus 148 ~E~~~~~y~ 156 (298)
T PLN02778 148 VEELLKNYE 156 (298)
T ss_pred HHHHHHHhh
Confidence 999998753
No 58
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.82 E-value=1.3e-19 Score=147.01 Aligned_cols=136 Identities=20% Similarity=0.224 Sum_probs=106.4
Q ss_pred eEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCC-c---ccc-cCCCCeeEEEccCCCHHHHHHHhcC--CCEEEEc
Q 029008 58 KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRS-S---LRD-SWANNVIWHQGNLLSSDSWKEALDG--VTAVISC 128 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~-~---~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~~ 128 (200)
+|+||||+|+||.+++++|+++| ++|++++|.... . ... ....+++++.+|++|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 789888764211 1 111 1123688999999999999999987 8999999
Q ss_pred cccCC------CCcccchhhHHHHHHHHHHHHHcCCC-EEEEEec-cccCcCC-----------cCCcchhhhHHhhHHH
Q 029008 129 VGGFG------SNSYMYKINGTANINAIRAASEKGVK-RFVYISA-ADFGVAN-----------YLLQGYYEGKDSNLSP 189 (200)
Q Consensus 129 ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS-~~~~~~~-----------~~~~~Y~~sK~~~E~~ 189 (200)
|+... .+...+++|+.++.+++++|.+.+.+ ++|++|| ..||... .+.+.|+.+|+.+|.+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 160 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL 160 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence 98643 23456799999999999999887544 8999998 4455321 2456799999999999
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++.+
T Consensus 161 ~~~~ 164 (317)
T TIGR01181 161 VRAY 164 (317)
T ss_pred HHHH
Confidence 8864
No 59
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.82 E-value=3.1e-19 Score=134.41 Aligned_cols=125 Identities=35% Similarity=0.477 Sum_probs=106.0
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCCCccc
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYM 138 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~ 138 (200)
|+|+||||++|+.++++|+++|++|+++.|++++... ..+++++.+|+.|++.+.++++++|+||+++|....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~---- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK---- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence 7999999999999999999999999999999775333 679999999999999999999999999999986543
Q ss_pred chhhHHHHHHHHHHHHHcCCCEEEEEeccc-cCcCCc--------CCcchhhhHHhhHHHHHhh
Q 029008 139 YKINGTANINAIRAASEKGVKRFVYISAAD-FGVANY--------LLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 139 ~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~-~~~~~~--------~~~~Y~~sK~~~E~~~~~~ 193 (200)
+...+.++++++++.+++++|++|+.. ++.... ....|...|...|+++++.
T Consensus 74 ---~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 134 (183)
T PF13460_consen 74 ---DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRES 134 (183)
T ss_dssp ---HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHS
T ss_pred ---cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhc
Confidence 267778899999999999999999953 332221 1236889999999999875
No 60
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.82 E-value=1.2e-19 Score=143.64 Aligned_cols=140 Identities=19% Similarity=0.132 Sum_probs=106.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
..+|+++||||+|+||.+++++|+++|++|+++.++.+.........++.++.+|++|+++++++++ ++|++|
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3568999999999999999999999999999887764432221112257899999999999888765 579999
Q ss_pred EccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEecc-ccCcCCcCCcchhhhHHhhHHHHH
Q 029008 127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~-~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
||+|... .++..+++|+.+++.+.+.+ ++.+.++||++||. .++.+.+....|+.+|++.+.+++
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~ 164 (255)
T PRK06463 85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTR 164 (255)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHH
Confidence 9998632 23456899999977665554 44556799999994 344444556789999999999988
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
..
T Consensus 165 ~l 166 (255)
T PRK06463 165 RL 166 (255)
T ss_pred HH
Confidence 74
No 61
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.82 E-value=1.8e-19 Score=142.77 Aligned_cols=139 Identities=17% Similarity=0.138 Sum_probs=107.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++++++||||+|+||.+++++|+++|++|++++|+++...+ .....++.++++|++|++.++++++ ++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999998643211 1113457889999999998887765 38
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHH----HHHHHH-HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANI----NAIRAA-SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~----~~~~~a-~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|+||||+|... .++..+++|+.+++ .+++.+ ++.+.++||++||.......++...|+.+|++.+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~ 165 (262)
T PRK13394 86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLL 165 (262)
T ss_pred CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence 99999999642 12345779999955 455555 5666789999999543344456678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 166 ~~~~~l 171 (262)
T PRK13394 166 GLARVL 171 (262)
T ss_pred HHHHHH
Confidence 988764
No 62
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.6e-19 Score=141.82 Aligned_cols=138 Identities=17% Similarity=0.131 Sum_probs=106.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-----------CCCE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----------GVTA 124 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----------~~d~ 124 (200)
|++++||||+|+||.+++++|+++|++|++++|+...........++.++++|+.|.+++++++. .+|+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 46899999999999999999999999999999976543222223468899999999998887432 4789
Q ss_pred EEEccccCCC-----------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 125 VISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 125 vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+|||+|.... +...+++|+.++..+.+.+. +.+.++||++||.....+.++...|+.+|.++|.+
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 160 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHH 160 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHH
Confidence 9999986421 24567899999777666554 34457999999964344556678899999999999
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++.+
T Consensus 161 ~~~~ 164 (243)
T PRK07023 161 ARAV 164 (243)
T ss_pred HHHH
Confidence 9854
No 63
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.5e-19 Score=146.24 Aligned_cols=139 Identities=17% Similarity=0.169 Sum_probs=107.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+++++||||+|+||.+++++|+++|++|++++|+.+...+ . .....+.++.+|++|++++.++++ ++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999999999999999999999999999998643211 0 112457899999999999888776 68
Q ss_pred CEEEEccccCCC------------CcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccc-cCcCCcCCcchhhhHHh
Q 029008 123 TAVISCVGGFGS------------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-FGVANYLLQGYYEGKDS 185 (200)
Q Consensus 123 d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~-~~~~~~~~~~Y~~sK~~ 185 (200)
|++|||||.... ++..+++|+.+...+++++ ++.+.++||++||.. +..+.+....|+++|++
T Consensus 119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaa 198 (293)
T PRK05866 119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAA 198 (293)
T ss_pred CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHH
Confidence 999999985321 1346789999988877765 356677999999953 33234556789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
++.+++..
T Consensus 199 l~~l~~~l 206 (293)
T PRK05866 199 LSAVSRVI 206 (293)
T ss_pred HHHHHHHH
Confidence 99988763
No 64
>PLN02253 xanthoxin dehydrogenase
Probab=99.82 E-value=3.3e-19 Score=142.92 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=108.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c-cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.++|+++||||+|+||.+++++|+++|++|++++|+.+...+ . ....++.++++|++|+++++++++ ++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999999999999999987543111 1 112468899999999999988776 58
Q ss_pred CEEEEccccCCC------------CcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 123 TAVISCVGGFGS------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 123 d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
|+||||||.... ++..+++|+.+++++++++.+ .+.+++|++||.....+.+....|+.+|+++
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 175 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAV 175 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHH
Confidence 999999986421 245789999999998887753 3446899999854323334456899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
|.+++..
T Consensus 176 ~~~~~~l 182 (280)
T PLN02253 176 LGLTRSV 182 (280)
T ss_pred HHHHHHH
Confidence 9999864
No 65
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=1.3e-19 Score=143.33 Aligned_cols=124 Identities=24% Similarity=0.265 Sum_probs=105.5
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccCC--
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG-- 133 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~~-- 133 (200)
+|||||++|.+|..|++.|. .+++|+.++|.. +|++|++.+.++++ ++|+|||+|+...
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 49999999999999999998 678999988863 69999999999998 4799999999753
Q ss_pred ----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccC----------cCCcCCcchhhhHHhhHHHHHhhccCcc
Q 029008 134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFG----------VANYLLQGYYEGKDSNLSPLLACYSLCC 198 (200)
Q Consensus 134 ----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~----------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 198 (200)
.++..|.+|..++.+++++|.+.|. .+||+|| .+++ ....|.+.||+||+++|..++++.+.+.
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~ 143 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHL 143 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCCEE
Confidence 3466789999999999999999987 8999998 3321 1246778999999999999999877665
Q ss_pred c
Q 029008 199 L 199 (200)
Q Consensus 199 ~ 199 (200)
|
T Consensus 144 I 144 (281)
T COG1091 144 I 144 (281)
T ss_pred E
Confidence 4
No 66
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.6e-19 Score=140.87 Aligned_cols=139 Identities=19% Similarity=0.178 Sum_probs=107.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|++++.++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999999999999887543111 0112467889999999999887765 5
Q ss_pred CCEEEEccccCC----CCcccchhhHHHHHHHHHHHHHcC--CCEEEEEecccc---C--cCCcCCcchhhhHHhhHHHH
Q 029008 122 VTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADF---G--VANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 122 ~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~~a~~~~--~~~~v~vSS~~~---~--~~~~~~~~Y~~sK~~~E~~~ 190 (200)
+|++|||+|... .+...+++|+.++.++++++.+.. .++||++||... + .+.+....|+.+|+++|.++
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~ 164 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDAL 164 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHH
Confidence 899999998532 345678999999999999997642 358999998421 1 11122468999999999999
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 165 ~~l 167 (248)
T PRK07806 165 RAL 167 (248)
T ss_pred HHH
Confidence 875
No 67
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.82 E-value=1.7e-19 Score=144.99 Aligned_cols=119 Identities=25% Similarity=0.336 Sum_probs=100.2
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCC--CEEEEccccCC--
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGV--TAVISCVGGFG-- 133 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~ag~~~-- 133 (200)
+|+||||+|++|++++++|+++|++|++++|. .+|+.|++.+.++++++ |+|||++|...
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 64 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD 64 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence 58999999999999999999999999999885 46999999999999865 99999998643
Q ss_pred ----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC----------CcCCcchhhhHHhhHHHHHhh
Q 029008 134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 134 ----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~----------~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.+...+++|+.++.++++++++.+. +||++|| ..|+.. ..+.+.|+.+|.++|++++.+
T Consensus 65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 65 GAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence 2234678999999999999988875 8999998 445432 124578999999999999875
No 68
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.82 E-value=7.6e-20 Score=148.56 Aligned_cols=129 Identities=19% Similarity=0.223 Sum_probs=95.3
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHH----HHHHhc-----CCCEEEEcc
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDS----WKEALD-----GVTAVISCV 129 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~----~~~~~~-----~~d~vi~~a 129 (200)
|+||||+||||++|+++|++.|++++++.|+...... ...+..+|+.|..+ +++++. ++|+|||+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-----HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 7999999999999999999999987777665433111 01223456655432 333432 689999999
Q ss_pred ccCC----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC----------CcCCcchhhhHHhhHHHHHhh
Q 029008 130 GGFG----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 130 g~~~----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~----------~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
|... +....+++|+.++.+++++|++.++ +||++|| ..|+.. ..|.+.|+.+|.++|++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~ 154 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQI 154 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 8532 2234688999999999999999887 6999999 456643 135578999999999998875
No 69
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.3e-19 Score=143.70 Aligned_cols=138 Identities=15% Similarity=0.077 Sum_probs=106.6
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---cc-CCCCeeEEEccCCCHHHHHHHhcC-------CCE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS-WANNVIWHQGNLLSSDSWKEALDG-------VTA 124 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~~Dl~d~~~~~~~~~~-------~d~ 124 (200)
+++++||||+|+||.+++++|+++|++|++++|+.+...+ .. ...++.++.+|++|++++.++++. +|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 5799999999999999999999999999999997543211 01 112688999999999999887653 799
Q ss_pred EEEccccCCC-----------CcccchhhHHHHHHHHH----HHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 125 VISCVGGFGS-----------NSYMYKINGTANINAIR----AASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 125 vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~----~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+|||+|.... ++..+++|+.++..+++ .+++.+.++||++||...-.+.+....|+.+|++.+.+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 161 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKY 161 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHH
Confidence 9999986421 23467899999988766 45556678999999953333345567899999999998
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++..
T Consensus 162 ~~~l 165 (257)
T PRK07024 162 LESL 165 (257)
T ss_pred HHHH
Confidence 8763
No 70
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.3e-19 Score=141.85 Aligned_cols=138 Identities=12% Similarity=0.091 Sum_probs=106.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-CCCEEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-GVTAVISC 128 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi~~ 128 (200)
|+++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|++++.+++. ++|+||||
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 35789999999999999999999999999999997543111 1112368899999999999998887 79999999
Q ss_pred cccCC----------CCcccchhhHHHHHHHHHH----HHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 129 VGGFG----------SNSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 129 ag~~~----------~~~~~~~~n~~~~~~~~~~----a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
+|... .++..+++|+.++..+.+. +.+.+.++||++||.......+....|+.+|.++|.+++.
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 158 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEA 158 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHH
Confidence 98542 1234678898888766554 4455678999999953323334567899999999988765
No 71
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3e-19 Score=142.05 Aligned_cols=140 Identities=15% Similarity=0.065 Sum_probs=111.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|++++.++++ +
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999997543111 1113468899999999999887665 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH-----cCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE-----KGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~-----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
+|+|||+||... .+...+++|+.++.++.+++.+ .+.++||++||.....+..+...|+.+|+++
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 167 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAAL 167 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHH
Confidence 899999998532 2345679999999999999864 4567899999954344556678999999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 168 ~~~~~~~ 174 (263)
T PRK07814 168 AHYTRLA 174 (263)
T ss_pred HHHHHHH
Confidence 9988864
No 72
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.81 E-value=2.1e-19 Score=140.59 Aligned_cols=139 Identities=15% Similarity=0.127 Sum_probs=107.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS 127 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~ 127 (200)
++|+++||||+|+||.+++++|+++|++|++++|+.+...+.....++.++.+|+.|+++++++++ ++|++||
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 467999999999999999999999999999999986542221112347889999999988877654 4899999
Q ss_pred ccccCC----------CCcccchhhHHHHHHHHHHHHH----cC--CCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 128 CVGGFG----------SNSYMYKINGTANINAIRAASE----KG--VKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 128 ~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~--~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
|+|... .++..+++|+.+++.+.+.+.+ .+ .+++|++||.....+.+....|+.+|+++|.+++
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~ 160 (236)
T PRK06483 81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTL 160 (236)
T ss_pred CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHH
Confidence 998532 2345678999999877666643 33 4589999986444445566789999999999998
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
.+
T Consensus 161 ~~ 162 (236)
T PRK06483 161 SF 162 (236)
T ss_pred HH
Confidence 74
No 73
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.81 E-value=2.7e-19 Score=141.51 Aligned_cols=140 Identities=13% Similarity=0.084 Sum_probs=110.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+|+++||||+|+||.+++++|+++|++|++++|+.++... .....++.++.+|++|+++++++++ .
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999987543211 0112358889999999999988775 4
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc----CCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|+||||+|... .++..+++|+.++.++++++.+. +.++||++||.....+.++...|+.+|.++|
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~ 167 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVG 167 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHH
Confidence 799999998642 12456789999999998888643 5679999999543445566789999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 168 ~~~~~~ 173 (255)
T PRK07523 168 NLTKGM 173 (255)
T ss_pred HHHHHH
Confidence 998864
No 74
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.7e-19 Score=143.17 Aligned_cols=139 Identities=14% Similarity=0.038 Sum_probs=108.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
++++++||||+|+||++++++|+++|++|++++|+.+.... ......+.++++|++|++++.++++ ++|++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35789999999999999999999999999999997644211 1123468889999999998877654 57999
Q ss_pred EEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 126 ISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
|||+|... .++..+++|+.++..+++.+ ++.+.+++|++||.....+.+....|+.+|++.+.+++
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~ 161 (275)
T PRK08263 82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSE 161 (275)
T ss_pred EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHH
Confidence 99999642 23456889999998887775 45667899999995433344556789999999998876
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
..
T Consensus 162 ~l 163 (275)
T PRK08263 162 AL 163 (275)
T ss_pred HH
Confidence 53
No 75
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=3.2e-19 Score=140.92 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=107.4
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.|+++||||+|+||.+++++|+++|++|++++|+...... .....++.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999999987543111 0113468999999999998877665 57
Q ss_pred CEEEEccccCC------------CCcccchhhHHHHHHHHHHHHHc-----C-----CCEEEEEeccccCcCCcCCcchh
Q 029008 123 TAVISCVGGFG------------SNSYMYKINGTANINAIRAASEK-----G-----VKRFVYISAADFGVANYLLQGYY 180 (200)
Q Consensus 123 d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~~a~~~-----~-----~~~~v~vSS~~~~~~~~~~~~Y~ 180 (200)
|++|||+|... .++..+++|+.++.++++++.+. + .++||++||.....+..+...|+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 99999998632 12345789999999998887432 1 45799999954334455678999
Q ss_pred hhHHhhHHHHHhh
Q 029008 181 EGKDSNLSPLLAC 193 (200)
Q Consensus 181 ~sK~~~E~~~~~~ 193 (200)
.+|+++|.+++.+
T Consensus 162 ~sK~a~~~~~~~l 174 (256)
T PRK12745 162 ISKAGLSMAAQLF 174 (256)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988875
No 76
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.81 E-value=1.7e-19 Score=142.13 Aligned_cols=139 Identities=19% Similarity=0.188 Sum_probs=108.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhcC--------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDG--------VT 123 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~--------~d 123 (200)
++|+++||||+|+||+++++.|+++|++|+++.++.....+ .....++.++.+|+.|++++.++++. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 45799999999999999999999999999887664332111 11124688999999999988877753 89
Q ss_pred EEEEccccCC----------------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhH
Q 029008 124 AVISCVGGFG----------------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 124 ~vi~~ag~~~----------------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
++|||+|... .+...+++|+.++.++++++. +.+.++||++||..+..+..+...|+.+|
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK 163 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAK 163 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHH
Confidence 9999998521 113458999999999998885 34557999999965444555678999999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++.|.+++..
T Consensus 164 ~a~~~l~~~l 173 (253)
T PRK08642 164 AALLGLTRNL 173 (253)
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 77
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.81 E-value=2.5e-19 Score=142.05 Aligned_cols=140 Identities=18% Similarity=0.083 Sum_probs=110.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---cc----CCCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS----WANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~----~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
..+|+++||||+|+||.+++++|+++|++|++++|+.+...+ .. ...++.++.+|++|+++++++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999999997543211 00 13468899999999998888775
Q ss_pred -CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
++|++|||||... +++..+++|+.+++.+.+++. +.+.++||++||.....+.+....|+.+|++
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa 164 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHG 164 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHH
Confidence 5899999999532 234568899999998888864 3455689999996433444556789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
++.+++..
T Consensus 165 ~~~~~~~l 172 (260)
T PRK07063 165 LLGLTRAL 172 (260)
T ss_pred HHHHHHHH
Confidence 99998864
No 78
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.81 E-value=5.9e-19 Score=139.47 Aligned_cols=139 Identities=12% Similarity=0.099 Sum_probs=108.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++++++||||+|+||.+++++|+++|++|++++|+.++..+ .....++.++.+|++|+++++++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999998654211 1112468889999999998887765 58
Q ss_pred CEEEEccccCC-----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEecc-ccCcCCcCCcchhhhHHhh
Q 029008 123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAA-DFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 123 d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~-~~~~~~~~~~~Y~~sK~~~ 186 (200)
|++|||||... .++..+++|+.+.+.+.+++ ++.+.++||++||. .+..+.+....|+.||+++
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 164 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGL 164 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHH
Confidence 99999999632 12456899999888776654 44556789999994 3334456678999999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 165 ~~~~~~l 171 (254)
T PRK07478 165 IGLTQVL 171 (254)
T ss_pred HHHHHHH
Confidence 9988864
No 79
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.81 E-value=8.5e-19 Score=138.97 Aligned_cols=136 Identities=17% Similarity=0.208 Sum_probs=106.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.... ...++.++.+|++|++.++++++ ++|+||
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4578999999999999999999999999999999975442 13468899999999988876553 579999
Q ss_pred EccccCC------------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcC-CcCCcchhhhHHhhHHH
Q 029008 127 SCVGGFG------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVA-NYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 127 ~~ag~~~------------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~-~~~~~~Y~~sK~~~E~~ 189 (200)
||||... .++..+++|+.+++.+.+++ ++.+.++||++||.....+ ..+...|+.+|++++.+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l 162 (260)
T PRK06523 83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTY 162 (260)
T ss_pred ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHH
Confidence 9998531 23456789999998776655 4455678999999532223 23578899999999998
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++..
T Consensus 163 ~~~~ 166 (260)
T PRK06523 163 SKSL 166 (260)
T ss_pred HHHH
Confidence 8864
No 80
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.81 E-value=3.9e-19 Score=138.75 Aligned_cols=144 Identities=19% Similarity=0.230 Sum_probs=123.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc----cCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
.+..+-|.|||||+|++++++|.+.|-+|++-.|..+....+ ....++-++..|+.|+++++++++..++|||..|
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIG 139 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIG 139 (391)
T ss_pred cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeec
Confidence 456789999999999999999999999999999976653222 2246899999999999999999999999999998
Q ss_pred cC--CCCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhhccCcccC
Q 029008 131 GF--GSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLACYSLCCLM 200 (200)
Q Consensus 131 ~~--~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 200 (200)
-- ...-.+.++|+.++..+++.|++.|+.+||++|+. |..-...+-|-.+|+++|..++++||+.+||
T Consensus 140 rd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~L--ganv~s~Sr~LrsK~~gE~aVrdafPeAtIi 209 (391)
T KOG2865|consen 140 RDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCL--GANVKSPSRMLRSKAAGEEAVRDAFPEATII 209 (391)
T ss_pred cccccCCcccccccchHHHHHHHHHHhhChhheeehhhc--cccccChHHHHHhhhhhHHHHHhhCCcceee
Confidence 42 13345789999999999999999999999999996 3445566789999999999999999999886
No 81
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.3e-19 Score=142.39 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=106.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc-cCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
++++++||||+|+||.+++++|+++|++|++++|+.+...+. ....++.++.+|++|+++++++++ ++|++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 467999999999999999999999999999999876442111 111257889999999998776654 579999
Q ss_pred EccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 127 SCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
||+|... .+...+++|+.++..+.+.+ .+.+.++||++||.....+.+....|+.+|++.+.+.+.
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 163 (273)
T PRK07825 84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDA 163 (273)
T ss_pred ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHH
Confidence 9999642 12446789999988876665 456677999999964444556678899999998877665
No 82
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.80 E-value=2.5e-19 Score=142.07 Aligned_cols=138 Identities=16% Similarity=0.097 Sum_probs=108.0
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhc--------CCCE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD--------GVTA 124 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~d~ 124 (200)
||+++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|.+++.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 5789999999999999999999999999999987654211 1113478999999999998887654 4699
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
||||||... .++..+++|+.++..+++++. +.+.++||++||.....+......|+.+|++++.++
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT 160 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence 999999642 124568999999999888774 345679999999532233445678999999999888
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 161 ~~l 163 (260)
T PRK08267 161 EAL 163 (260)
T ss_pred HHH
Confidence 764
No 83
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.80 E-value=1.1e-18 Score=142.06 Aligned_cols=136 Identities=26% Similarity=0.396 Sum_probs=107.6
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc----CCCCeeEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS----WANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG 131 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~ 131 (200)
+|+||||+|+||.+++++|+++|++|++++|......... ...+++++.+|+.|++.+.++++ ++|+||||+|.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 5899999999999999999999999998866433211110 01157789999999999999886 69999999986
Q ss_pred CC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC----------cCCcchhhhHHhhHHHHHhh
Q 029008 132 FG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN----------YLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 132 ~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~----------~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.. .+...++.|+.++.+++++|.+.++++||++|| ..|+... .+...|+.+|.++|.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~ 159 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDL 159 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHH
Confidence 42 234567899999999999999998899999998 3454321 24578999999999988864
No 84
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.80 E-value=1.5e-18 Score=137.19 Aligned_cols=141 Identities=21% Similarity=0.237 Sum_probs=106.6
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc-cCCCCeeEEEccCCC-HHHHHHHh-cCCCEEEEcc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLS-SDSWKEAL-DGVTAVISCV 129 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~Dl~d-~~~~~~~~-~~~d~vi~~a 129 (200)
...+++|+||||+|++|+.++++|+++|++|+++.|+.++.... ....+++++.+|++| .+.+.+.+ .++|+||+++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 34578999999999999999999999999999999986542211 112368999999998 46777777 6899999999
Q ss_pred ccCC--CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcCC-c-CC---------cchhhhHHhhHHHHHhh
Q 029008 130 GGFG--SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-Y-LL---------QGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 130 g~~~--~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~~-~-~~---------~~Y~~sK~~~E~~~~~~ 193 (200)
|... .....+++|..++.++++++++.++++||++||. .|+... . .. ..|..+|...|+++++.
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~ 171 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS 171 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 8642 2233467899999999999999999999999994 454321 1 11 12334688888887764
No 85
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.80 E-value=4.5e-19 Score=140.23 Aligned_cols=140 Identities=11% Similarity=0.123 Sum_probs=108.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
..+|+++||||+++||.+++++|+++|++|++++|+...... .....++.++.+|++|+++++++++ ++|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899999999999999999999999999998886432111 1123468899999999999988775 489
Q ss_pred EEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||||... .++..+++|+.+++.+.+++.+ .+ .++||++||...-.+......|+.+|++.+.
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~ 165 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG 165 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence 9999999532 3456789999999988887643 33 3689999995322334456789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 166 l~~~l 170 (251)
T PRK12481 166 LTRAL 170 (251)
T ss_pred HHHHH
Confidence 98863
No 86
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.5e-18 Score=138.80 Aligned_cols=139 Identities=13% Similarity=0.112 Sum_probs=109.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------------ccCCCCeeEEEccCCCHHHHHHHhc--
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------------DSWANNVIWHQGNLLSSDSWKEALD-- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~~~~~~~~~Dl~d~~~~~~~~~-- 120 (200)
++++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|++++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999987643110 0113468899999999999888765
Q ss_pred -----CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCC--cCCcch
Q 029008 121 -----GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVAN--YLLQGY 179 (200)
Q Consensus 121 -----~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~--~~~~~Y 179 (200)
++|++|||+|... .++..+++|+.++.++++++.. .+..++|++||.....+. ++...|
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 164 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAY 164 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchh
Confidence 5899999999632 1245678999999999998854 334589999985433333 566899
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
+.+|+++|.+++..
T Consensus 165 ~~sK~a~~~~~~~l 178 (273)
T PRK08278 165 TMAKYGMSLCTLGL 178 (273)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 87
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.80 E-value=5.3e-19 Score=140.78 Aligned_cols=140 Identities=14% Similarity=0.066 Sum_probs=109.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------~ 121 (200)
.++|+++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|+++++++++ +
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 357899999999999999999999999999999997543211 1113468899999999999988775 4
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||+|... .++..+++|+.+.+.+.+++ ++.+.++||++||.....+.+....|+.+|++.+
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~ 165 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMA 165 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHH
Confidence 899999998532 24567899988887766655 4455679999999644444455678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+.+..
T Consensus 166 ~l~~~l 171 (263)
T PRK08339 166 GLVRTL 171 (263)
T ss_pred HHHHHH
Confidence 988864
No 88
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.80 E-value=5.7e-19 Score=139.35 Aligned_cols=136 Identities=13% Similarity=0.087 Sum_probs=99.6
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
..++++++||||+|+||.+++++|+++|++|++++|+..............++.+|++|.+++.+.+.++|++|||||..
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~ 90 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN 90 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence 34678999999999999999999999999999999876222111111223678899999999999999999999999863
Q ss_pred C-------CCcccchhhHHHHHHHHHHHHHc-------CCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 133 G-------SNSYMYKINGTANINAIRAASEK-------GVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 133 ~-------~~~~~~~~n~~~~~~~~~~a~~~-------~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
. +++..+++|+.++..+++++.+. +.+.++..||.. +........|++||++++.+
T Consensus 91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a-~~~~~~~~~Y~aSKaal~~~ 160 (245)
T PRK12367 91 PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEA-EIQPALSPSYEISKRLIGQL 160 (245)
T ss_pred CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccc-ccCCCCCchhHHHHHHHHHH
Confidence 2 34567899999999999887442 122343444422 22223456799999998643
No 89
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.80 E-value=6.5e-19 Score=139.13 Aligned_cols=139 Identities=15% Similarity=0.120 Sum_probs=107.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+++++||||+|++|.+++++|+++|++|++++|+.+.... .....++.++.+|++|++++.++++ ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 35799999999999999999999999999999998654211 1113478899999999999888776 58
Q ss_pred CEEEEccccCCC----------CcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|+||||+|.... ++..+++|+.+++.+++.+ ++.+.++||++||.....+..+.+.|+.+|++.+.
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~ 162 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIG 162 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHH
Confidence 999999985421 2345678989866555554 45677899999995433455667899999999998
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 163 ~~~~l 167 (258)
T PRK12429 163 LTKVV 167 (258)
T ss_pred HHHHH
Confidence 88753
No 90
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.80 E-value=8.7e-19 Score=137.50 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=111.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
.++++++||||+|+||++++++|+++|++|+++.|+.+.... .....++.++.+|++|+++++++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999888776432111 1123568899999999999888776
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|++|||+|... .++..+++|+.++.++++++.+. ..++||++||..+..+.++...|+.+|.+++.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 162 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEG 162 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence 5899999999642 22456789999999999888654 23589999996666666777899999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 163 ~~~~~ 167 (245)
T PRK12937 163 LVHVL 167 (245)
T ss_pred HHHHH
Confidence 88864
No 91
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.80 E-value=7.4e-19 Score=137.99 Aligned_cols=137 Identities=15% Similarity=0.087 Sum_probs=108.1
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc-cCCCCeeEEEccCCCHHHHHHHhcC----CCEEEEccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALDG----VTAVISCVG 130 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~----~d~vi~~ag 130 (200)
+++++||||+|+||.+++++|+++|++|++++|+.+...+. ....++.++.+|++|++++++++++ +|.+|||+|
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 46899999999999999999999999999999975442211 1124688999999999999998875 589999998
Q ss_pred cCC----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 131 GFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 131 ~~~----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
... .++..+++|+.++.++++++... +.+++|++||.....+.+....|+.+|++++.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~ 154 (240)
T PRK06101 81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFART 154 (240)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHH
Confidence 532 12356899999999999998753 235899999854334445667899999999998875
No 92
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.80 E-value=6.7e-19 Score=139.91 Aligned_cols=139 Identities=21% Similarity=0.214 Sum_probs=107.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
.+++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|+.|.+++.++++ .+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999999987643211 1113468889999999988877664 57999
Q ss_pred EEccccCC---------------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 126 ISCVGGFG---------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 126 i~~ag~~~---------------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|||||... .++..+++|+.+++.+++++.+. ..+++|++||...-.+......|+.+|++++
T Consensus 84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 163 (262)
T TIGR03325 84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVV 163 (262)
T ss_pred EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHHHHH
Confidence 99998531 13467899999999999888543 2257888888532334445678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 164 ~l~~~l 169 (262)
T TIGR03325 164 GLVKEL 169 (262)
T ss_pred HHHHHH
Confidence 999864
No 93
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.80 E-value=4.9e-19 Score=139.38 Aligned_cols=139 Identities=14% Similarity=0.076 Sum_probs=106.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEe-ecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.+++++||||+|+||++++++|+++|++|+++ .|+.+...+ .....++.++.+|++|++++.++++ .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999998774 555432111 1123468899999999999888776 4
Q ss_pred CCEEEEccccCCC----------CcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|+|||++|.... +...+++|+.+++.+++++.+ .+.++||++||.....+.++...|+.+|+++|
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~ 162 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALE 162 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHH
Confidence 7999999985321 123567999999998888764 45569999999643444556779999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 163 ~~~~~~ 168 (250)
T PRK08063 163 ALTRYL 168 (250)
T ss_pred HHHHHH
Confidence 998864
No 94
>PRK09135 pteridine reductase; Provisional
Probab=99.80 E-value=5.6e-19 Score=138.71 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=107.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
++++++||||+|+||++++++|+++|++|++++|+.....+ ......+.++.+|++|.+++..+++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45799999999999999999999999999999987433211 1112468899999999999888776
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
++|+||||+|... .++..+++|+.++.++++++.+. ..+.++++++.....+.++...|+.+|+++|
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~ 164 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALE 164 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence 4799999999532 12456789999999999998642 2346777776433445567789999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++.+
T Consensus 165 ~~~~~l 170 (249)
T PRK09135 165 MLTRSL 170 (249)
T ss_pred HHHHHH
Confidence 999874
No 95
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.7e-19 Score=143.05 Aligned_cols=140 Identities=16% Similarity=0.100 Sum_probs=105.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------c-cCCCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D-SWANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~-~~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.++..+ . ....++.++.+|++|.++++++++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 467899999999999999999999999999999997543211 0 112468899999999998887764
Q ss_pred -CCCEEEEccccCC--------CCcccchhhHHHHHH----HHHHHHHcCCCEEEEEeccc-c--Cc----------CCc
Q 029008 121 -GVTAVISCVGGFG--------SNSYMYKINGTANIN----AIRAASEKGVKRFVYISAAD-F--GV----------ANY 174 (200)
Q Consensus 121 -~~d~vi~~ag~~~--------~~~~~~~~n~~~~~~----~~~~a~~~~~~~~v~vSS~~-~--~~----------~~~ 174 (200)
++|+||||||... .++..+++|+.+.+. +++.+++.+.++||++||.. + +. +..
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 173 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN 173 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence 4899999999532 235568999999554 45555555667999999853 1 21 112
Q ss_pred CCcchhhhHHhhHHHHHhh
Q 029008 175 LLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 175 ~~~~Y~~sK~~~E~~~~~~ 193 (200)
+...|+.||++.+.+.+..
T Consensus 174 ~~~~Y~~SK~a~~~~~~~l 192 (306)
T PRK06197 174 RVAAYGQSKLANLLFTYEL 192 (306)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 3468999999999988763
No 96
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.3e-18 Score=136.69 Aligned_cols=139 Identities=17% Similarity=0.117 Sum_probs=108.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---------ccCCCCeeEEEccCCCHHHHHHHhc-----
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~----- 120 (200)
++++++||||+|+||++++++|+++|++|++++|...+..+ .....++.++.+|+.|+++++++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999998765332111 0113468899999999999888764
Q ss_pred --CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHH-----HcCCCEEEEEeccccCcCCcCCcchhhhH
Q 029008 121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~-----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
++|+||||+|... .+...+++|+.++.++++++. +.+.++||++||.....+..+...|+.+|
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK 164 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASK 164 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHH
Confidence 5899999999643 123467899999999999987 45667999999954333445677899999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++.+.+++..
T Consensus 165 ~a~~~~~~~l 174 (249)
T PRK12827 165 AGLIGLTKTL 174 (249)
T ss_pred HHHHHHHHHH
Confidence 9999888764
No 97
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.80 E-value=6.4e-19 Score=138.93 Aligned_cols=137 Identities=18% Similarity=0.110 Sum_probs=106.6
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAVIS 127 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~ 127 (200)
|+++||||+|++|.++++.|+++|++|++++|+.++... .....++.++.+|+.|.++++++++ ++|+|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999999999998653211 1113468899999999998887664 6899999
Q ss_pred ccccCC-----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 128 CVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 128 ~ag~~~-----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
++|... .++..+++|+.++..+++.+ .+.+.++||++||.....+..+...|+.+|.+.|.+.+.
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~ 160 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN 160 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence 998632 12346789999977666665 455677999999964344455677999999999998876
Q ss_pred h
Q 029008 193 C 193 (200)
Q Consensus 193 ~ 193 (200)
.
T Consensus 161 l 161 (248)
T PRK10538 161 L 161 (248)
T ss_pred H
Confidence 4
No 98
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.3e-19 Score=156.62 Aligned_cols=136 Identities=21% Similarity=0.173 Sum_probs=107.1
Q ss_pred CeEEEEccCchhHHHHHHHHH--HCCCcEEEeecCCCCccc----c-cCCCCeeEEEccCCCH------HHHHHHhcCCC
Q 029008 57 EKLLVLGGNGFVGSHICREAL--DRGLTVASLSRSGRSSLR----D-SWANNVIWHQGNLLSS------DSWKEALDGVT 123 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~----~-~~~~~~~~~~~Dl~d~------~~~~~~~~~~d 123 (200)
|+|+||||+||||++++++|+ +.|++|++++|+...... . ....+++++.+|++|+ +.++++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 479999999999999999999 579999999996432110 0 1125789999999984 456665 8999
Q ss_pred EEEEccccCC---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcC------------CcCCcchhhhHHhhH
Q 029008 124 AVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA------------NYLLQGYYEGKDSNL 187 (200)
Q Consensus 124 ~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~------------~~~~~~Y~~sK~~~E 187 (200)
+||||||... .+...+++|+.++.+++++|.+.++++||++||. .||.. ..+.+.|+.+|+++|
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E 159 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE 159 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence 9999999643 3345678999999999999999999999999984 45422 123467999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
+++++.
T Consensus 160 ~~~~~~ 165 (657)
T PRK07201 160 KLVREE 165 (657)
T ss_pred HHHHHc
Confidence 999853
No 99
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.80 E-value=4.6e-19 Score=140.31 Aligned_cols=140 Identities=13% Similarity=0.115 Sum_probs=110.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
.++++++||||+|+||.++++.|+++|++|++++|+.+.... .....++.++.+|++|+++++++++ .+|+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346799999999999999999999999999999988654211 1113468899999999999887775 5799
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHHHHHcC-----CCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEKG-----VKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~~-----~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+|||+|... .++..+++|+.++.++++++.... ..+||++||.....+.++...|+.+|++.+.+
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISY 163 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHH
Confidence 999998532 234568899999999999885431 24899999954344456778999999999998
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++..
T Consensus 164 ~~~l 167 (257)
T PRK07067 164 TQSA 167 (257)
T ss_pred HHHH
Confidence 8763
No 100
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.1e-19 Score=141.38 Aligned_cols=138 Identities=17% Similarity=0.096 Sum_probs=106.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++|+++||||+|+||++++++|+++|++|++++|+.+...+ . ....++.++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999999999999999999999999999987543211 1 112357889999999999988765 47
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcC-CCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|++|||||... .++..+++|+.++.++++++. +.+ .++||++||...-.+.++...|+.+|++++
T Consensus 85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 164 (275)
T PRK05876 85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVV 164 (275)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHH
Confidence 99999999532 234567999999999888874 344 468999999543345566788999999866
Q ss_pred HHHHh
Q 029008 188 SPLLA 192 (200)
Q Consensus 188 ~~~~~ 192 (200)
.+.+.
T Consensus 165 ~~~~~ 169 (275)
T PRK05876 165 GLAET 169 (275)
T ss_pred HHHHH
Confidence 66554
No 101
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.80 E-value=1.5e-18 Score=138.07 Aligned_cols=136 Identities=16% Similarity=0.123 Sum_probs=109.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
.++|+++||||+|+||.+++++|+++|++|++++++..... ..++.++.+|++|+++++++++ .+|++|
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35689999999999999999999999999999998765421 2468889999999998887765 479999
Q ss_pred EccccCC-------------------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhH
Q 029008 127 SCVGGFG-------------------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 127 ~~ag~~~-------------------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
||||... .++..+++|+.+++.+++++.+ .+.++||++||.....+......|+.+|
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (266)
T PRK06171 83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATK 162 (266)
T ss_pred ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHH
Confidence 9999532 1134678999999998888754 3446899999964434455678999999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++++.+++..
T Consensus 163 ~a~~~l~~~l 172 (266)
T PRK06171 163 AALNSFTRSW 172 (266)
T ss_pred HHHHHHHHHH
Confidence 9999998874
No 102
>PLN02996 fatty acyl-CoA reductase
Probab=99.80 E-value=7.8e-19 Score=151.00 Aligned_cols=118 Identities=18% Similarity=0.202 Sum_probs=93.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC---cEEEeecCCCCccc------c--------------------cCCCCeeE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLR------D--------------------SWANNVIW 104 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~------~--------------------~~~~~~~~ 104 (200)
..+++|+|||||||||+++++.|++.+. +|+++.|....... . ....++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 4678999999999999999999998653 68999987643110 0 00157899
Q ss_pred EEccCC-------CHHHHHHHhcCCCEEEEccccCC---CCcccchhhHHHHHHHHHHHHHc-CCCEEEEEec-cccCc
Q 029008 105 HQGNLL-------SSDSWKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGV 171 (200)
Q Consensus 105 ~~~Dl~-------d~~~~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS-~~~~~ 171 (200)
+.+|++ |.+.++.+++++|+|||+|+... ++...+++|+.|+.+++++|++. ++++||++|| .+||.
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~ 167 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE 167 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence 999998 45557788889999999999654 34557899999999999999886 6889999998 44543
No 103
>PRK08264 short chain dehydrogenase; Validated
Probab=99.80 E-value=1.3e-18 Score=136.13 Aligned_cols=137 Identities=22% Similarity=0.151 Sum_probs=109.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc---CCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~ag 130 (200)
.+++++||||+|++|.+++++|+++|+ +|++++|+.++..+ ...++.++.+|+.|++.++++++ .+|+|||++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 457999999999999999999999999 99999998655322 33578999999999999988876 4799999999
Q ss_pred cCC-----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 131 GFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 131 ~~~-----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
... .+...+++|+.++..+++++. +.+.++||++||...-.+..+...|+.+|.+.|.+++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l 160 (238)
T PRK08264 83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQAL 160 (238)
T ss_pred cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHH
Confidence 721 123457899999999888864 346678999998532234455678999999999888764
No 104
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.2e-18 Score=138.04 Aligned_cols=140 Identities=15% Similarity=0.087 Sum_probs=106.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
.++|+++||||+|+||.+++++|+++|++|+++.++...... .....++.++.+|++|.+++.++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999888765432111 0113468899999999998887765
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc----CCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
.+|+||||||... .++..+++|+.+++.+++++... +.+++|+++|.....+.+....|+.+|+++
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~ 166 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAAL 166 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHH
Confidence 4799999998632 23456899999999999887653 345888888743223344456899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
|.+.+..
T Consensus 167 ~~~~~~l 173 (258)
T PRK09134 167 WTATRTL 173 (258)
T ss_pred HHHHHHH
Confidence 9988874
No 105
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.80 E-value=5.6e-19 Score=138.72 Aligned_cols=138 Identities=20% Similarity=0.146 Sum_probs=108.3
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc----CCCEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD----GVTAV 125 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~v 125 (200)
||+++||||+|+||.+++++|+++|++|++++|+.++... .....++.++++|++|+++++++++ .+|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 5789999999999999999999999999999998654211 0113478999999999999888765 46999
Q ss_pred EEccccCCC----------CcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 126 ISCVGGFGS----------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 126 i~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
||++|.... +...+++|+.++..+++++.. .+.++||++||.....+.+....|+.+|++++.+++
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 160 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS 160 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence 999985321 124578999999988887653 466799999996433444556789999999999888
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
..
T Consensus 161 ~l 162 (243)
T PRK07102 161 GL 162 (243)
T ss_pred HH
Confidence 64
No 106
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.79 E-value=9.2e-19 Score=140.26 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=107.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------c-cCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------D-SWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~-~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
++++++||||+|++|.++++.|+++|++|++++|+.+.... . ....++.++.+|++|++++++ ++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 35789999999999999999999999999999988653211 0 112468999999999988775 43
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++|+||||+|... .++..+++|+.++.++++.+ ++.+.++||++||.....+.++...|+.+|++.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~ 160 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYAL 160 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHH
Confidence 5799999998643 12345789999998888775 556678999999854344455678999999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.++++.
T Consensus 161 ~~~~~~l 167 (280)
T PRK06914 161 EGFSESL 167 (280)
T ss_pred HHHHHHH
Confidence 9988864
No 107
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.79 E-value=7.8e-19 Score=138.32 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=108.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.++++++||||+|+||.+++++|+++|++|+++.|+.+...+ .....++.++.+|++|+++++++++ ++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 356899999999999999999999999999999988643211 1113468899999999999888765 68
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|+||||+|... .++..+++|+.++.++.+.+ ++.+.++||++||.....+......|+.+|++.+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 162 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIAS 162 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence 99999999642 12345789999998766655 45567899999995322334556789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 163 ~~~~l 167 (252)
T PRK06138 163 LTRAM 167 (252)
T ss_pred HHHHH
Confidence 98875
No 108
>PRK06128 oxidoreductase; Provisional
Probab=99.79 E-value=4.5e-18 Score=137.91 Aligned_cols=140 Identities=14% Similarity=0.076 Sum_probs=108.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc-c------ccCCCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-R------DSWANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
.++|+++||||+|+||.+++++|+++|++|++..++.+... + .....++.++.+|++|+++++++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999988876543211 0 1113467889999999988887764
Q ss_pred -CCCEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 -GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 -~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++|++|||||... .++..+++|+.+++.+++++.+. ..++||++||...-.+......|+.+|+++
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~ 212 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAI 212 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHH
Confidence 5899999999531 23557899999999999998754 235899999954333445567899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 213 ~~~~~~l 219 (300)
T PRK06128 213 VAFTKAL 219 (300)
T ss_pred HHHHHHH
Confidence 9998864
No 109
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.79 E-value=4.6e-19 Score=141.75 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=108.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---cc----CCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS----WANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~----~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
++++++|||++|+||.++++.|+++|++|++++|+.+.... .. ...++.++.+|+.|++++.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999987543111 00 02468899999999998888776
Q ss_pred CCCEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 121 ~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
++|++|||+|... .+...+++|+.++..+++++.+ .+.++||++||.....+.++...|+.+|++
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a 165 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSA 165 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHH
Confidence 6899999998532 1234678899999988887654 334589999995444445567889999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
+|.+++.+
T Consensus 166 ~~~~~~~~ 173 (276)
T PRK05875 166 VDHLMKLA 173 (276)
T ss_pred HHHHHHHH
Confidence 99999864
No 110
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.1e-18 Score=138.61 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=109.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
.+++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|+++++++++ .+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999999998653211 1113468899999999998887765 47999
Q ss_pred EEccccCC---------CCcccchhhHHHHHHHHHHHHH---cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 126 ISCVGGFG---------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 126 i~~ag~~~---------~~~~~~~~n~~~~~~~~~~a~~---~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
|||+|... .++..+++|+.+++.+.+++.. .+.++||++||.....+.+....|+.+|++++.+++..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l 164 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSM 164 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHH
Confidence 99998532 2345678999999988887654 33468999999543344455678999999999988863
No 111
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.79 E-value=9.3e-19 Score=142.18 Aligned_cols=132 Identities=19% Similarity=0.205 Sum_probs=102.2
Q ss_pred EEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc----CCCEEEEccccCC
Q 029008 59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGFG 133 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~vi~~ag~~~ 133 (200)
|+||||+|+||.++++.|.++|+ +|++++|........ ......+..|+.+.+.++.+.+ ++|+|||+|+...
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~ 78 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFL--NLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD 78 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhh--hhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence 68999999999999999999998 788887654322100 1112456788888888877664 7999999998632
Q ss_pred ----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC----------CcCCcchhhhHHhhHHHHHhh
Q 029008 134 ----SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA----------NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 134 ----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~----------~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
++...+++|+.++.+++++|.+.++ +||++|| ..|+.. ..+.+.|+.+|..+|++++++
T Consensus 79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~ 152 (314)
T TIGR02197 79 TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRR 152 (314)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHH
Confidence 3455778999999999999998887 7999999 456532 125678999999999999863
No 112
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.79 E-value=1.2e-18 Score=136.88 Aligned_cols=139 Identities=19% Similarity=0.126 Sum_probs=109.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++++++||||+|++|.+++++|+++|++|++++|+.++... .....++.++.+|+.|+++++++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 56799999999999999999999999999999998543111 1112458899999999999988775 58
Q ss_pred CEEEEccccCCC----------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccc-cCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~-~~~~~~~~~~Y~~sK~~~E 187 (200)
|+|||++|.... +...+++|+.++.++++++. +.+.++||++||.. ++.+.+....|+.+|.+++
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~ 164 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLV 164 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHH
Confidence 999999986431 23467889999998888873 45677999999953 3245566778999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 165 ~~~~~~ 170 (251)
T PRK12826 165 GFTRAL 170 (251)
T ss_pred HHHHHH
Confidence 988764
No 113
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.79 E-value=7.4e-19 Score=145.09 Aligned_cols=136 Identities=21% Similarity=0.281 Sum_probs=106.9
Q ss_pred eEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCcc-----c---------c-cCC-CCeeEEEccCCCH------H
Q 029008 58 KLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSL-----R---------D-SWA-NNVIWHQGNLLSS------D 113 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----~---------~-~~~-~~~~~~~~Dl~d~------~ 113 (200)
+|+|||||||+|.+++++|+++| ++|+++.|+.+... . . ... .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 67999999865310 0 0 001 4789999999754 5
Q ss_pred HHHHHhcCCCEEEEccccCC---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcCC---------------c
Q 029008 114 SWKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN---------------Y 174 (200)
Q Consensus 114 ~~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~~---------------~ 174 (200)
.+..+.+++|+|||||+... +....+++|+.++.+++++|.+.+.++|+++||. .++... .
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG 160 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence 67777889999999999654 3345668999999999999999888899999994 444311 1
Q ss_pred CCcchhhhHHhhHHHHHhh
Q 029008 175 LLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 175 ~~~~Y~~sK~~~E~~~~~~ 193 (200)
+.++|+.+|+++|++++.+
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~ 179 (367)
T TIGR01746 161 LAGGYAQSKWVAELLVREA 179 (367)
T ss_pred cCCChHHHHHHHHHHHHHH
Confidence 2357999999999998875
No 114
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.79 E-value=2e-18 Score=136.05 Aligned_cols=136 Identities=11% Similarity=0.086 Sum_probs=109.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
..+|+++||||+|+||..++++|+++|++|++++|+.. .....++.++++|++|+++++++++ .+|++|
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL----TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV 81 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh----hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34689999999999999999999999999999998761 1224578899999999999988775 379999
Q ss_pred EccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 127 SCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 127 ~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
||+|... .+...+++|+.++..+++++. +.+.++||++||.....+..+...|+.+|++.|.+++.
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~ 161 (252)
T PRK08220 82 NAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKC 161 (252)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHH
Confidence 9999642 224467899999999988874 34556899999964344455678899999999998876
Q ss_pred h
Q 029008 193 C 193 (200)
Q Consensus 193 ~ 193 (200)
.
T Consensus 162 l 162 (252)
T PRK08220 162 V 162 (252)
T ss_pred H
Confidence 4
No 115
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.79 E-value=2.9e-18 Score=135.81 Aligned_cols=138 Identities=20% Similarity=0.187 Sum_probs=104.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHHHHHhc------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
..++++||||+|+||.+++++|+++| ++|++++|+.+...+ .....+++++.+|++|+++++++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 46799999999999999999999995 899999998764111 1112368999999999988665543
Q ss_pred CCCEEEEccccCCC----Cc------ccchhhHHHHHH----HHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 GVTAVISCVGGFGS----NS------YMYKINGTANIN----AIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 ~~d~vi~~ag~~~~----~~------~~~~~n~~~~~~----~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++|++|||+|.... +. ..+++|+.+++. +++.+.+.+.++||++||.....+.++...|+.||++.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~ 166 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGL 166 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHH
Confidence 69999999987532 11 247999998886 45566677778999999953323445567899999999
Q ss_pred HHHHHh
Q 029008 187 LSPLLA 192 (200)
Q Consensus 187 E~~~~~ 192 (200)
..+.+.
T Consensus 167 ~~~~~~ 172 (253)
T PRK07904 167 DGFYLG 172 (253)
T ss_pred HHHHHH
Confidence 877665
No 116
>PRK08643 acetoin reductase; Validated
Probab=99.79 E-value=9.4e-19 Score=138.41 Aligned_cols=139 Identities=20% Similarity=0.161 Sum_probs=106.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++|+++||||+|+||.+++++|+++|++|++++|+.+.... . ....++.++.+|++|++.++++++ ++
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 36799999999999999999999999999999987543111 1 112467889999999998887765 58
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|++|||+|... .++..+++|+.++..+++.+.+ .+ ..+||++||.....+.+....|+.+|++.+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 99999998632 1244678999998877777643 22 358999998543334455678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 161 ~~~~~l 166 (256)
T PRK08643 161 GLTQTA 166 (256)
T ss_pred HHHHHH
Confidence 888763
No 117
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.4e-18 Score=137.30 Aligned_cols=140 Identities=18% Similarity=0.104 Sum_probs=109.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc--cccCCCCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSWANNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
..+++++||||+|+||.+++++|+++|++|++++|+..... .......+.++.+|++|+++++++++ ++|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45789999999999999999999999999999998754311 11112456789999999998887765 5799
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
+|||+|... .+...+++|+.++.++++++.. .+.++||++||.....+.+....|+.+|++.+.++
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 172 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT 172 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHH
Confidence 999999642 1234678999999999888754 35679999999543334455678999999999888
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 173 ~~l 175 (255)
T PRK06841 173 KVL 175 (255)
T ss_pred HHH
Confidence 864
No 118
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.3e-18 Score=139.32 Aligned_cols=140 Identities=14% Similarity=0.085 Sum_probs=107.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|++++.++++ +
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456799999999999999999999999999999887543111 0112467889999999999987765 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||+|... .+...+++|+.++.++++.+. +.+.++||++||.....+.++...|+.+|++.|
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLE 167 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence 799999998642 123446899999999888864 345568999999532233445678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 168 ~l~~~~ 173 (274)
T PRK07775 168 AMVTNL 173 (274)
T ss_pred HHHHHH
Confidence 998864
No 119
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.79 E-value=8.5e-19 Score=137.96 Aligned_cols=139 Identities=20% Similarity=0.202 Sum_probs=108.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|.++++++++ ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999987643211 1113468899999999998888765 58
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|++|||+|... .++..+++|+.++.++++++. +.+.++||++||.....+......|+.+|++.+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVA 161 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHH
Confidence 99999998532 123468899999998877764 4566799999995433344556789999999998
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 162 ~~~~l 166 (250)
T TIGR03206 162 FSKTM 166 (250)
T ss_pred HHHHH
Confidence 88864
No 120
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.79 E-value=1.3e-18 Score=137.57 Aligned_cols=140 Identities=11% Similarity=0.065 Sum_probs=109.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+|+++||||+|+||.+++++|+++|++|++++|+.+.... . ....++.++.+|++|+++++++++ .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 357899999999999999999999999999999987543211 1 112467788999999998887764 4
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||+|... +++..+++|+.+++.+.+++.+ .+.++||++||.....+.+....|+.+|++++
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 166 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVK 166 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHH
Confidence 799999998532 2345789999999988887754 34578999999543344456779999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.++++.
T Consensus 167 ~~~~~l 172 (254)
T PRK08085 167 MLTRGM 172 (254)
T ss_pred HHHHHH
Confidence 999874
No 121
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.1e-18 Score=137.82 Aligned_cols=139 Identities=18% Similarity=0.125 Sum_probs=106.0
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEe-ecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc--------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------- 120 (200)
++++++||||+|+||.+++++|+++|++|+++ .|+.++... .....++.++.+|++|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 45799999999999999999999999999775 454322110 1112468899999999999887765
Q ss_pred -----CCCEEEEccccCCC----------CcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhH
Q 029008 121 -----GVTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 121 -----~~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
++|++|||+|.... +...+++|+.++.++++++.+. ..++||++||.....+.++...|+.+|
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~sK 164 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSK 164 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhhH
Confidence 48999999986421 1345679999999999988653 345899999854334556678899999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++.|.+++..
T Consensus 165 ~a~~~~~~~~ 174 (254)
T PRK12746 165 GALNTMTLPL 174 (254)
T ss_pred HHHHHHHHHH
Confidence 9999987753
No 122
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.79 E-value=4.1e-19 Score=139.33 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=108.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc---CCCEEEEccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG 130 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~ag 130 (200)
..+++++|||++|++|.++++.|+++|++|++++|+.+...+.....++.++.+|++|.+.+.++++ ++|+|||++|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 3568999999999999999999999999999999976442211112246788999999998888876 4899999998
Q ss_pred cCC----------CCcccchhhHHHHHHHHHHHHHc----C-CCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 131 GFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 131 ~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
... +++..+++|+.++.++++++.+. + .++||++||.....+......|+.+|.++|.+++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~ 164 (245)
T PRK07060 87 IASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVL 164 (245)
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHH
Confidence 642 22445679999999998887543 2 368999999543334456678999999999988764
No 123
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.5e-18 Score=136.64 Aligned_cols=137 Identities=17% Similarity=0.108 Sum_probs=106.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.++++++||||+|+||.+++++|+++|++|++++|+...... . ....++.++.+|++|.++++++++ .
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 356899999999999999999999999999999997543111 0 112367789999999998887665 5
Q ss_pred CCEEEEccccCC-------------CCcccchhhHHHHHHHHHHHHHc----CCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 122 VTAVISCVGGFG-------------SNSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 122 ~d~vi~~ag~~~-------------~~~~~~~~n~~~~~~~~~~a~~~----~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
+|+||||+|... .+...+++|+.++.++++++.+. +.++||++||... ..+.+.|+.+|+
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~---~~~~~~Y~~sK~ 160 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA---WLYSNFYGLAKV 160 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc---cCCccccHHHHH
Confidence 799999999642 12345789999999988887643 4569999999421 234578999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+.|.+++..
T Consensus 161 a~~~~~~~l 169 (250)
T PRK07774 161 GLNGLTQQL 169 (250)
T ss_pred HHHHHHHHH
Confidence 999998874
No 124
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.79 E-value=1.3e-18 Score=138.33 Aligned_cols=139 Identities=16% Similarity=0.184 Sum_probs=107.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
++++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|+++++++++ .+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 56899999999999999999999999999999997543211 1113467889999999988887764 58999
Q ss_pred EEccccCCC---------------CcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 126 ISCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 126 i~~ag~~~~---------------~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|||+|.... ++..+++|+.+++.+++++.+. ..+++|++||...-.+......|+.+|++++
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 164 (263)
T PRK06200 85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVV 164 (263)
T ss_pred EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHHHHH
Confidence 999996321 3346789999999888887542 2358999998543334455678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 165 ~~~~~l 170 (263)
T PRK06200 165 GLVRQL 170 (263)
T ss_pred HHHHHH
Confidence 998864
No 125
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1e-18 Score=139.67 Aligned_cols=137 Identities=15% Similarity=0.068 Sum_probs=105.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEEEc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVISC 128 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~ 128 (200)
||+++||||+|+||.+++++|+++|++|++++|+.+.... ....++.++.+|++|.+.++++++ ++|+||||
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 4789999999999999999999999999999987643211 112357889999999988887664 58999999
Q ss_pred cccCC----------CCcccchhhHHHHHHHHHHHHH---cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 129 VGGFG----------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 129 ag~~~----------~~~~~~~~n~~~~~~~~~~a~~---~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
+|... .++..+++|+.++..+++++.. .+.+++|++||...-.+.+....|+.+|.+.+.+.+..
T Consensus 80 ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l 157 (274)
T PRK05693 80 AGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDAL 157 (274)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHH
Confidence 99532 2245678999999988888743 24468999998543334455678999999999987753
No 126
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.79 E-value=2e-18 Score=135.86 Aligned_cols=138 Identities=21% Similarity=0.131 Sum_probs=105.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------cc-CCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DS-WANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
+++++||||+|+||.+++++|+++|++|++++|+.++..+ .. ...++.++.+|++|++++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999998643211 11 13468899999999988877664 5
Q ss_pred CCEEEEccccCCC----------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCC-cCCcchhhhHHhh
Q 029008 122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVAN-YLLQGYYEGKDSN 186 (200)
Q Consensus 122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~-~~~~~Y~~sK~~~ 186 (200)
+|++|||+|.... +...+++|+.+...+++++. +.+.++||++||.....+. .+...|+.+|+++
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 161 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV 161 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence 8999999986432 13457899999988887763 4567799999994322222 2357899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 162 ~~~~~~l 168 (248)
T PRK08251 162 ASLGEGL 168 (248)
T ss_pred HHHHHHH
Confidence 9888754
No 127
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=1e-18 Score=137.41 Aligned_cols=139 Identities=16% Similarity=0.114 Sum_probs=109.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc----cCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
.+++++||||+|++|.+++++|+++|++|++++|+..+.... ....++.++.+|+.|+++++.+++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 467999999999999999999999999999999986542110 012458899999999999988765 479
Q ss_pred EEEEccccCC-----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
+|||++|... .++..+++|+.++..+++.+. +.+.++||++||.....+.++...|+.+|.+.+.
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~ 163 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVIT 163 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHH
Confidence 9999998632 123467899999888777765 3566799999995434455667889999999998
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 164 ~~~~~ 168 (251)
T PRK07231 164 LTKAL 168 (251)
T ss_pred HHHHH
Confidence 88764
No 128
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.5e-18 Score=137.10 Aligned_cols=139 Identities=18% Similarity=0.095 Sum_probs=104.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc--------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------- 120 (200)
++|+++||||+|+||.+++++|+++|++|++..++.....+ ......+..+.+|++|.+++..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 46899999999999999999999999999887543222111 1112456788999999877664332
Q ss_pred -----CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHcC--CCEEEEEeccccCcCCcCCcchhhhH
Q 029008 121 -----GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 121 -----~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~~--~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
++|++|||||... .++..+++|+.+++.+++++.+.. .++||++||.....+.+....|+.||
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK 162 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence 5899999999532 135567899999999998876542 35999999964444455667899999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++++.+++..
T Consensus 163 aa~~~~~~~l 172 (252)
T PRK12747 163 GAINTMTFTL 172 (252)
T ss_pred HHHHHHHHHH
Confidence 9999988864
No 129
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.79 E-value=1.2e-18 Score=138.05 Aligned_cols=139 Identities=16% Similarity=0.163 Sum_probs=106.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c---cC-CCCeeEEEccCCCHHHHHHHhc-------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D---SW-ANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~---~~-~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
|+++++||||+|+||.+++++|+++|++|++++|+...... . .. ..++.++.+|++|.+++.++++
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999987543211 0 01 1468899999999988887664
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
.+|++|||+|... .++..+++|+.++..+++++.+ .+ ..+||++||.....+......|+.+|++
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 160 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence 5799999998532 2345678999999877777643 44 3589999985323334456789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
.+.+++..
T Consensus 161 ~~~l~~~l 168 (259)
T PRK12384 161 GVGLTQSL 168 (259)
T ss_pred HHHHHHHH
Confidence 99888764
No 130
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.79 E-value=1.7e-18 Score=136.21 Aligned_cols=139 Identities=15% Similarity=0.116 Sum_probs=107.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc------cCCCCeeEEEccCCCHHHHHHHhcC-------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALDG------- 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~------- 121 (200)
.+++++||||+|+||.+++++|+++|++|+++.++.....+. ....++.++.+|++|++.+.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999998766543221111 1124688999999999998887764
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|+||||+|... .++..+++|+.++..+++++.. .+.++||++||.....+..+...|+.+|++.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 164 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGML 164 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence 799999999643 2244678999999998888864 34569999999533334456789999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 165 ~~~~~l 170 (247)
T PRK12935 165 GFTKSL 170 (247)
T ss_pred HHHHHH
Confidence 887764
No 131
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.79 E-value=1.3e-18 Score=137.88 Aligned_cols=140 Identities=14% Similarity=0.179 Sum_probs=108.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.++++++||||+|+||.++++.|+++|++|++++|+.++... .....++.++.+|++|+++++++++ .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 356899999999999999999999999999999987543111 1113467889999999999876554 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc-----CCCEEEEEeccc--cCcCC--cCCcchhhh
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK-----GVKRFVYISAAD--FGVAN--YLLQGYYEG 182 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~-----~~~~~v~vSS~~--~~~~~--~~~~~Y~~s 182 (200)
+|+||||+|... .+...+++|+.++.++++++.+. +.++||++||.. ++.+. .+...|+.+
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~s 169 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTS 169 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHH
Confidence 899999998532 12346789999999999987554 567999999842 23222 245789999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|++.|.+++++
T Consensus 170 Ka~~~~~~~~~ 180 (259)
T PRK08213 170 KGAVINFTRAL 180 (259)
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 132
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.79 E-value=7.7e-19 Score=142.19 Aligned_cols=119 Identities=23% Similarity=0.222 Sum_probs=96.7
Q ss_pred EEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccCC----
Q 029008 60 LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGFG---- 133 (200)
Q Consensus 60 lVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~~---- 133 (200)
|||||+||||.+|++.|+++|++|+++.+. ..+|++|.++++++++ ++|+|||+|+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~ 65 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA 65 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence 699999999999999999999988766432 1479999999999887 4799999998532
Q ss_pred ---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcC--------------CcCCc-chhhhHHhhHHHHHhh
Q 029008 134 ---SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVA--------------NYLLQ-GYYEGKDSNLSPLLAC 193 (200)
Q Consensus 134 ---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~--------------~~~~~-~Y~~sK~~~E~~~~~~ 193 (200)
.+...+++|+.++.+++++|++.++++||++|| ..|+.. ..|.+ .|+.+|.++|++++.+
T Consensus 66 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~ 144 (306)
T PLN02725 66 NMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAY 144 (306)
T ss_pred hhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence 334568899999999999999999999999998 456532 11223 4999999999988754
No 133
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.79 E-value=2e-18 Score=135.88 Aligned_cols=140 Identities=15% Similarity=0.138 Sum_probs=107.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
.++|+++||||+|+||.+++++|+++|++|++++|+...... .....++.++.+|++|++++..+++ ++|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899999999999999999999999999999986532111 1123468899999999999886654 589
Q ss_pred EEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||+|... .++..+++|+.+...+++++.+ .+ .+++|++||...-.+......|+.+|++.+.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~ 162 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG 162 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence 9999998642 2345678999999998888753 33 4689999994322233456789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 163 ~~~~l 167 (248)
T TIGR01832 163 LTKLL 167 (248)
T ss_pred HHHHH
Confidence 88864
No 134
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.79 E-value=3e-18 Score=135.68 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=109.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.++++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|++++.++++ ++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 456899999999999999999999999999999987654210 1123468899999999999888775 57
Q ss_pred CEEEEccccCC---------CCcccchhhHHHHHHHHHHHHH---cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 123 TAVISCVGGFG---------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 123 d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~~a~~---~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
|+||||+|... .++..+++|+.+...+.+.+.+ .+.++||++||...-.+..+...|+.+|+++|.++
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALT 164 (258)
T ss_pred CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHHH
Confidence 99999999532 1345678999999988887753 23468999999543344556789999999999999
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 165 ~~l 167 (258)
T PRK08628 165 REW 167 (258)
T ss_pred HHH
Confidence 864
No 135
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=1.2e-18 Score=136.59 Aligned_cols=139 Identities=17% Similarity=0.109 Sum_probs=108.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++++++||||+|++|.+++++|+++|++|+++.|+.....+ .....++.++.+|+.|++++.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 45799999999999999999999999999887776543211 1123568899999999999888764 5
Q ss_pred CCEEEEccccCCC----------CcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|+|||++|.... +...+++|+.+..++++.+ ++.+.++||++||.....+......|+.+|.+.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~ 164 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLV 164 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHH
Confidence 7999999995321 2345788999999888887 4567789999999543334455678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 165 ~~~~~~ 170 (249)
T PRK12825 165 GLTKAL 170 (249)
T ss_pred HHHHHH
Confidence 888653
No 136
>PRK08589 short chain dehydrogenase; Validated
Probab=99.79 E-value=2e-18 Score=137.98 Aligned_cols=137 Identities=11% Similarity=0.079 Sum_probs=106.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+|+++||||+|+||.+++++|+++|++|++++|+ +...+ . ....++.++.+|++|+++++++++ .+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 56899999999999999999999999999999998 32111 1 113468899999999988887665 47
Q ss_pred CEEEEccccCC-----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|++|||||... .++..+++|+.+.+.+.+++. +.+ ++||++||...-.+.+....|+.+|++++
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~ 162 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVI 162 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHH
Confidence 99999998642 123467889999987777753 334 69999999543344456688999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 163 ~l~~~l 168 (272)
T PRK08589 163 NFTKSI 168 (272)
T ss_pred HHHHHH
Confidence 998874
No 137
>PRK12743 oxidoreductase; Provisional
Probab=99.79 E-value=1.7e-18 Score=137.12 Aligned_cols=139 Identities=13% Similarity=0.099 Sum_probs=108.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++++++||||+|+||.+++++|+++|++|+++.++.....+ .....++.++.+|++|+++++++++ .
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999999988765433111 1123478899999999998877665 4
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc----C-CCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
+|++|||+|... .+...+++|+.+...+++++.+. + .++||++||.....+..+...|+.+|+++
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 160 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL 160 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence 799999998642 22456789999999999887543 2 35899999965445556678999999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.++++.
T Consensus 161 ~~l~~~l 167 (256)
T PRK12743 161 GGLTKAM 167 (256)
T ss_pred HHHHHHH
Confidence 9998764
No 138
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.78 E-value=2.9e-18 Score=134.26 Aligned_cols=139 Identities=15% Similarity=0.167 Sum_probs=109.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+++++|||++|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 45799999999999999999999999999999998643211 1113468899999999999888775 68
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|+|||++|... .+...+++|+.++.++.+++. +.+.+++|++||.....+..+...|+.+|.+.+.
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 165 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLG 165 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence 99999998632 123467999999998888775 4456789999996444445566789999999998
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++.+
T Consensus 166 ~~~~~ 170 (239)
T PRK07666 166 LTESL 170 (239)
T ss_pred HHHHH
Confidence 88754
No 139
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.78 E-value=2.8e-18 Score=137.38 Aligned_cols=140 Identities=15% Similarity=0.192 Sum_probs=107.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||++++++|+++|++|++++|+.+.... . ....++.++++|+.|++++..+++ +
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 356899999999999999999999999999999997543111 0 112468899999999988887664 6
Q ss_pred CCEEEEccccCC-------------------------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcC
Q 029008 122 VTAVISCVGGFG-------------------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVA 172 (200)
Q Consensus 122 ~d~vi~~ag~~~-------------------------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~ 172 (200)
+|++|||+|... .++..+++|+.+++.+.+++ .+.+.++||++||.....+
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 167 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP 167 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence 899999998532 12345788999988666554 3445678999999543344
Q ss_pred CcCCcchhhhHHhhHHHHHhh
Q 029008 173 NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 173 ~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.++...|+.+|++++.+++..
T Consensus 168 ~~~~~~Y~~sK~a~~~l~~~l 188 (278)
T PRK08277 168 LTKVPAYSAAKAAISNFTQWL 188 (278)
T ss_pred CCCCchhHHHHHHHHHHHHHH
Confidence 556778999999999998864
No 140
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.8e-18 Score=136.06 Aligned_cols=139 Identities=17% Similarity=0.078 Sum_probs=106.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
++++++||||+|+||++++++|+++|++|++++|+.+...+ .....++.++.+|++|.+++..+++ ++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999999987543111 1123467889999999887766543 58999
Q ss_pred EEccccCC----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 126 ISCVGGFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
|||+|... .++..+++|+.++.++++++.+. ...++|++||.....+.+....|+.+|++.|.+++..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~l 164 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTL 164 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHH
Confidence 99998532 22456899999999999999752 2357888887432233455679999999999999653
No 141
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.78 E-value=2.3e-18 Score=134.76 Aligned_cols=139 Identities=16% Similarity=0.108 Sum_probs=108.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++++++||||+|++|.+++++|+++|++|++++|+..+... .....++.++.+|+.|++++.++++ .+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35799999999999999999999999999999998654211 1123468899999999998887765 36
Q ss_pred CEEEEccccCCC----------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|+|||++|.... +...+++|+.+..++++++. +.+.++||++||.....+..+...|+.+|.+.|.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~ 163 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIG 163 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHH
Confidence 999999986431 23457889999998888874 4567899999995433345566789999999988
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 164 ~~~~l 168 (246)
T PRK05653 164 FTKAL 168 (246)
T ss_pred HHHHH
Confidence 87764
No 142
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.78 E-value=2.4e-18 Score=136.11 Aligned_cols=140 Identities=13% Similarity=0.137 Sum_probs=110.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.++++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|.+++.++++ +
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999887543211 1113467889999999998887654 4
Q ss_pred CCEEEEccccCC---------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 122 VTAVISCVGGFG---------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 122 ~d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
+|++|||+|... .++..+++|+.+++++++++. +.+.++||++||.....+..+...|+.+|++.+.
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 168 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASH 168 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence 799999999632 123457899999999999885 3344699999996544555667889999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 169 ~~~~l 173 (255)
T PRK06113 169 LVRNM 173 (255)
T ss_pred HHHHH
Confidence 99874
No 143
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.4e-18 Score=136.16 Aligned_cols=138 Identities=14% Similarity=0.069 Sum_probs=107.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++|+++||||+|++|..++++|+++|++|++++|+.++..+ .....++.++.+|++|++++.++++ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999999999999999999999999999997643211 1112468899999999998887765 48
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|++|||+|... .++..+++|+.+++++++.+ .+.+.++||++||.....+..+...|+.+|++.+.
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 164 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAA 164 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHH
Confidence 99999999632 22456789999998877776 34456789999995433344556789999999998
Q ss_pred HHHh
Q 029008 189 PLLA 192 (200)
Q Consensus 189 ~~~~ 192 (200)
+++.
T Consensus 165 ~~~~ 168 (241)
T PRK07454 165 FTKC 168 (241)
T ss_pred HHHH
Confidence 8875
No 144
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.78 E-value=2.1e-18 Score=136.67 Aligned_cols=137 Identities=16% Similarity=0.108 Sum_probs=103.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc--cc--cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RD--SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.++|+++||||+|+||.+++++|+++|++|++++|+..... .. ....++.++.+|++|.+++.++++ ++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 35689999999999999999999999999999998742110 00 113467889999999988877665 58
Q ss_pred CEEEEccccCC-----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccc-cCcCCcCCcchhhhHHhh
Q 029008 123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-FGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 123 d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~-~~~~~~~~~~Y~~sK~~~ 186 (200)
|++|||||... .+...+++|+.++..+++.+ ++.+.++||++||.. ++ .+..+|+.+|++.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---~~~~~Y~~sK~a~ 162 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG---INRVPYSAAKGGV 162 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC---CCCCccHHHHHHH
Confidence 99999998421 12345688988887655554 455667999999953 32 2456899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 163 ~~~~~~l 169 (260)
T PRK12823 163 NALTASL 169 (260)
T ss_pred HHHHHHH
Confidence 9998864
No 145
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.78 E-value=2.8e-18 Score=140.41 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=104.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++++++||||+|+||.+++++|+++|++|++++|+.++..+ . ....++.++.+|++|.++++++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 57899999999999999999999999999999987543211 1 112468899999999999888775 38
Q ss_pred CEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHH----cC--CCEEEEEeccc--c----Cc--------
Q 029008 123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAASE----KG--VKRFVYISAAD--F----GV-------- 171 (200)
Q Consensus 123 d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~----~~--~~~~v~vSS~~--~----~~-------- 171 (200)
|+||||||... .++..+++|+.+++++++++.+ .+ .++||++||.. + +.
T Consensus 85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~ 164 (322)
T PRK07453 85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPAD 164 (322)
T ss_pred cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccc
Confidence 99999999532 1245689999999988887753 22 35999999842 1 11
Q ss_pred ---------------------CCcCCcchhhhHHhhHHHHHhh
Q 029008 172 ---------------------ANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 172 ---------------------~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
+..+...|+.||.+.+.+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 207 (322)
T PRK07453 165 LGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMREL 207 (322)
T ss_pred hhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHH
Confidence 0123467999999887766653
No 146
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.78 E-value=3.1e-18 Score=135.12 Aligned_cols=140 Identities=13% Similarity=0.026 Sum_probs=108.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.++++++||||+|+||.+++++|+++|++|++++|+.+.... . ....++.++.+|+.|.++++++++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999987543111 0 112357889999999998887665 4
Q ss_pred CCEEEEccccCC-----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
+|++||++|... .++..+++|+.++..+++++ ++.+.+++|++||.....+.++...|+.+|++.
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al 165 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAV 165 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHH
Confidence 899999998531 12356889999998877776 444567999999854344556678999999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
|.+++..
T Consensus 166 ~~~~~~l 172 (252)
T PRK07035 166 ISMTKAF 172 (252)
T ss_pred HHHHHHH
Confidence 9998874
No 147
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.3e-18 Score=137.58 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=109.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc-----cCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-----SWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
++|+++||||+|+||++++++|+++|++|++++|+....... ....++.++.+|++|+++++++++ ++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999999999999999876432110 112467899999999998887664 57
Q ss_pred CEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|++|||+|... .++..+++|+.++..+++++.+. ..++||++||.....+.++...|+.+|.+.+.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 163 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLA 163 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence 99999998632 12456789999999999998643 23589999996434445567889999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 164 l~~~~ 168 (258)
T PRK07890 164 ASQSL 168 (258)
T ss_pred HHHHH
Confidence 88864
No 148
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.78 E-value=2.8e-18 Score=135.98 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=108.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCc-cc---ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LR---DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
..+++++||||+|+||.+++++|+++|++|+++.|+.... .. .....++.++.+|++|.++++++++ .+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999999873211 10 1113468899999999999888776 57
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|++|||+|... .++..+++|+.+...+.+++. +.+.+++|++||.....+.+....|+.+|++++.
T Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 172 (258)
T PRK06935 93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAG 172 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHH
Confidence 99999999632 234567899999887776664 4456799999995433344556789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 173 ~~~~l 177 (258)
T PRK06935 173 LTKAF 177 (258)
T ss_pred HHHHH
Confidence 98874
No 149
>PRK09242 tropinone reductase; Provisional
Probab=99.78 E-value=2.9e-18 Score=135.73 Aligned_cols=141 Identities=17% Similarity=0.146 Sum_probs=110.3
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccC-CCCeeEEEccCCCHHHHHHHhc-----
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~-~~~~~~~~~Dl~d~~~~~~~~~----- 120 (200)
...+|+++||||+|+||.++++.|+++|++|++++|+.+...+ ... ..++.++.+|++|+++++++++
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999987643111 011 2468889999999988776654
Q ss_pred --CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
++|+||||+|... +++..+++|+.++..+++++. +.+.++||++||.....+......|+.+|.
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 165 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKA 165 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHH
Confidence 5799999998632 234568999999999888874 345679999999543345566788999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+.+.+++..
T Consensus 166 a~~~~~~~l 174 (257)
T PRK09242 166 ALLQMTRNL 174 (257)
T ss_pred HHHHHHHHH
Confidence 999988863
No 150
>PRK06196 oxidoreductase; Provisional
Probab=99.78 E-value=1.4e-18 Score=141.86 Aligned_cols=140 Identities=15% Similarity=0.092 Sum_probs=105.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc-CCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+...+.. ...++.++.+|++|.++++++++ ++|+|
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 35689999999999999999999999999999999865421110 11247899999999999887664 58999
Q ss_pred EEccccCC--------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCc------------CCcCCcchhh
Q 029008 126 ISCVGGFG--------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGV------------ANYLLQGYYE 181 (200)
Q Consensus 126 i~~ag~~~--------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~------------~~~~~~~Y~~ 181 (200)
|||||... .++..+++|+.++..+.+.+ ++.+.++||++||..... +..+...|+.
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 183 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQ 183 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHH
Confidence 99999642 23556889999987766654 445557999999853111 1123457999
Q ss_pred hHHhhHHHHHhh
Q 029008 182 GKDSNLSPLLAC 193 (200)
Q Consensus 182 sK~~~E~~~~~~ 193 (200)
||++.+.+.+..
T Consensus 184 SK~a~~~~~~~l 195 (315)
T PRK06196 184 SKTANALFAVHL 195 (315)
T ss_pred HHHHHHHHHHHH
Confidence 999999887653
No 151
>PRK07985 oxidoreductase; Provisional
Probab=99.78 E-value=7.5e-18 Score=136.32 Aligned_cols=140 Identities=16% Similarity=0.072 Sum_probs=107.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCc-cc------ccCCCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LR------DSWANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
.++|+++||||+|+||.+++++|+++|++|+++.|+.... .+ .....++.++.+|++|++++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999887654321 11 1113467889999999988877654
Q ss_pred -CCCEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 -GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 -~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++|++|||||... +++..+++|+.++..+++++.+. ..++||++||...-.+.+....|+.+|+++
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal 206 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI 206 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHH
Confidence 4799999998531 23567899999999999988653 225899999954333445567899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 207 ~~l~~~l 213 (294)
T PRK07985 207 LNYSRGL 213 (294)
T ss_pred HHHHHHH
Confidence 9988764
No 152
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.78 E-value=3.6e-18 Score=135.92 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=109.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|+++++++++ .
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 456899999999999999999999999999999887643211 0113468899999999999888775 4
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||+|... .+...+++|+.+...+.+.+. +.+.++||++||.....+.++...|+.+|++++
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~ 167 (265)
T PRK07097 88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLK 167 (265)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHH
Confidence 899999999643 124467899999987777764 345679999999543344556788999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 168 ~l~~~l 173 (265)
T PRK07097 168 MLTKNI 173 (265)
T ss_pred HHHHHH
Confidence 999874
No 153
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.78 E-value=3e-18 Score=135.58 Aligned_cols=140 Identities=17% Similarity=0.155 Sum_probs=107.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|+++++++++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999987543211 1113467889999999998887765
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccc--cCcCCcCCcchhhhHH
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD--FGVANYLLQGYYEGKD 184 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~--~~~~~~~~~~Y~~sK~ 184 (200)
++|++|||+|... .++..+++|+.+++.+++++. +.+.++||++||.. .+.+......|+.+|+
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKa 165 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKA 165 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHH
Confidence 4799999999642 234568899999988777653 44557999999843 2233334678999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+.+.+++..
T Consensus 166 a~~~l~~~l 174 (254)
T PRK06114 166 GVIHLSKSL 174 (254)
T ss_pred HHHHHHHHH
Confidence 999988864
No 154
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.78 E-value=2.2e-18 Score=135.89 Aligned_cols=138 Identities=19% Similarity=0.186 Sum_probs=105.6
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHh-------cCCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEAL-------DGVT 123 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~d 123 (200)
+++++||||+|+||++++++|+++|++|++++|+.+.... .....++.++.+|+.|++++.+++ .++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999998543211 011346889999999999666544 4589
Q ss_pred EEEEccccCCC----------CcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 124 AVISCVGGFGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+|||++|.... ++..+++|+.++..+++.+ ++.+.++||++||.....+.+....|+.+|.+.|.+
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~ 160 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL 160 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence 99999986431 1345678999988887776 456778999999853223445567899999999988
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++..
T Consensus 161 ~~~~ 164 (255)
T TIGR01963 161 TKVL 164 (255)
T ss_pred HHHH
Confidence 8753
No 155
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.78 E-value=2.7e-18 Score=136.97 Aligned_cols=137 Identities=11% Similarity=0.122 Sum_probs=106.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
|+++||||+|+||.+++++|+++|++|++++|+.++... .....++.++.+|+.|++++.++++ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999987654211 1123468889999999998887765 5899
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHH----HHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~----a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
||||+|... .++..+++|+.++..+.+. +++.+.++||++||.....+.+....|+.+|++.+.+.
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS 160 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence 999999642 1234578998888876665 45566789999999543445566789999999988877
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 161 ~~l 163 (270)
T PRK05650 161 ETL 163 (270)
T ss_pred HHH
Confidence 653
No 156
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.78 E-value=2e-18 Score=140.79 Aligned_cols=140 Identities=14% Similarity=0.066 Sum_probs=106.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccC-CCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~-~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
.++++++||||+++||.+++++|+++|++|++++|+.++..+ ... ..++.++.+|+.|.++++++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 457899999999999999999999999999999998653211 111 2368899999999999887764
Q ss_pred -CCCEEEEccccCC---------CCcccchhhHHHHHHHHHHHHH---cCCCEEEEEeccc--cCc----------CCcC
Q 029008 121 -GVTAVISCVGGFG---------SNSYMYKINGTANINAIRAASE---KGVKRFVYISAAD--FGV----------ANYL 175 (200)
Q Consensus 121 -~~d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~~a~~---~~~~~~v~vSS~~--~~~----------~~~~ 175 (200)
.+|++|||||... .++..+++|+.+.+.+.+.+.. .+..+||++||.. ++. +..+
T Consensus 92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~ 171 (313)
T PRK05854 92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAG 171 (313)
T ss_pred CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcc
Confidence 4899999999643 2244689999999888777642 2346899999853 221 1134
Q ss_pred CcchhhhHHhhHHHHHhh
Q 029008 176 LQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 176 ~~~Y~~sK~~~E~~~~~~ 193 (200)
...|+.||++.+.+.++.
T Consensus 172 ~~~Y~~SK~a~~~~~~~l 189 (313)
T PRK05854 172 MRAYSQSKIAVGLFALEL 189 (313)
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 568999999999988754
No 157
>PRK12742 oxidoreductase; Provisional
Probab=99.78 E-value=1.9e-18 Score=134.96 Aligned_cols=139 Identities=17% Similarity=0.155 Sum_probs=106.0
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc-CCCCeeEEEccCCCHHHHHHHhc---CCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALD---GVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~ag 130 (200)
++++++||||+|+||.+++++|+++|++|+++.++.....+.. ...++.++.+|++|.+.+.+.++ .+|++|||+|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 5689999999999999999999999999988776433211111 11246788899999988887665 4899999998
Q ss_pred cCC----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEecccc-CcCCcCCcchhhhHHhhHHHHHhh
Q 029008 131 GFG----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADF-GVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 131 ~~~----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~-~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
... +++..+++|+.+++.+++.+.+. ..+++|++||... ..+.++...|+.+|+++|.+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~l 160 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGL 160 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHH
Confidence 632 23567899999999887776554 2458999999533 234566789999999999988863
No 158
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.78 E-value=3.7e-18 Score=133.80 Aligned_cols=138 Identities=21% Similarity=0.205 Sum_probs=106.8
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
+++++|||++|+||.++++.|+++|++|++++|+...... .....++.++.+|+.|.+++.++++ .+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999988532111 0112468899999999998887765 48
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|++||++|... .++..+++|+.++.++.+++ ++.+.++||++||.....+.+....|..+|++.+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 99999998642 22456789999998875544 55567799999995433445566789999999998
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 162 ~~~~l 166 (245)
T PRK12824 162 FTKAL 166 (245)
T ss_pred HHHHH
Confidence 88764
No 159
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.78 E-value=3.2e-18 Score=140.54 Aligned_cols=140 Identities=14% Similarity=0.088 Sum_probs=107.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|+++++++++ +
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 356899999999999999999999999999999998654211 1113467889999999999988764 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||||... .++..+++|+.+++++.+++ ++.+..+||++||...-.+.+....|+.+|++++
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~ 164 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLR 164 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHH
Confidence 899999998532 12346899999999877775 4455678999998543334455678999999988
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+.+..
T Consensus 165 ~~~~sL 170 (330)
T PRK06139 165 GFSEAL 170 (330)
T ss_pred HHHHHH
Confidence 777753
No 160
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1e-17 Score=135.30 Aligned_cols=141 Identities=12% Similarity=0.062 Sum_probs=109.2
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc------
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
..++|+++||||+|+||.+++++|+++|++|++++|+.....+ .....++.++.+|++|.+.++++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3457899999999999999999999999999999887543111 1112467899999999998887765
Q ss_pred -CCCEEEEccccCCC-----------CcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 -~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++|+||||||.... +...+++|+.++.++++++.+. ..++||++||.....+.+....|+.+|+++
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~ 202 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAI 202 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHH
Confidence 57999999996321 2346889999999999998653 235899999954333344567899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 203 ~~l~~~l 209 (290)
T PRK06701 203 HAFTRSL 209 (290)
T ss_pred HHHHHHH
Confidence 9988864
No 161
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.78 E-value=1.7e-18 Score=134.68 Aligned_cols=133 Identities=10% Similarity=-0.002 Sum_probs=103.6
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc----CCCEEEEccccC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGF 132 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~vi~~ag~~ 132 (200)
++++||||+|+||+++++.|+++|++|++++|+.++........++.++.+|++|+++++++++ .+|++|||+|..
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 3799999999999999999999999999999875442111111246789999999999988775 589999998731
Q ss_pred ---------------CCCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 133 ---------------GSNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 133 ---------------~~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
..++..+++|+.+++.+++++.+. ..++||++||.. .+....|+.+|++++.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~l 154 (223)
T PRK05884 81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQ 154 (223)
T ss_pred ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHHHHHHHHHHH
Confidence 123456799999999999887543 235899999853 234578999999999998863
No 162
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.77 E-value=4e-18 Score=140.25 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=106.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|+++++++++ .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 456899999999999999999999999999999997543211 1113468899999999999987764 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||+|... .++..+++|+.+...+.+.+ ++.+.++||++||.....+.+....|+.+|++++
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~ 165 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIR 165 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHH
Confidence 899999999532 12456788988877655554 4555679999999543334455678999999999
Q ss_pred HHHHh
Q 029008 188 SPLLA 192 (200)
Q Consensus 188 ~~~~~ 192 (200)
.+.+.
T Consensus 166 ~~~~~ 170 (334)
T PRK07109 166 GFTDS 170 (334)
T ss_pred HHHHH
Confidence 88775
No 163
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3.2e-18 Score=135.46 Aligned_cols=138 Identities=14% Similarity=0.096 Sum_probs=103.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
.++++++||||+|+||.+++++|+++|++|++++|+..............++.+|++|+++++++++ ++|++|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4578999999999999999999999999999999875432111111123678999999999888775 579999
Q ss_pred EccccCCC------------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccc--cCcCCcCCcchhhhHHhhHH
Q 029008 127 SCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD--FGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 127 ~~ag~~~~------------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~--~~~~~~~~~~Y~~sK~~~E~ 188 (200)
||+|.... ++..+++|+.++..+++.+. +.+.+++|++||.. ++. ..+...|+.+|++.+.
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-~~~~~~Y~~sKaal~~ 163 (255)
T PRK06057 85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-ATSQISYTASKGGVLA 163 (255)
T ss_pred ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-CCCCcchHHHHHHHHH
Confidence 99986421 24567899999987777653 44566899999842 322 2345689999998888
Q ss_pred HHHh
Q 029008 189 PLLA 192 (200)
Q Consensus 189 ~~~~ 192 (200)
+++.
T Consensus 164 ~~~~ 167 (255)
T PRK06057 164 MSRE 167 (255)
T ss_pred HHHH
Confidence 7775
No 164
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.77 E-value=2.8e-18 Score=134.89 Aligned_cols=139 Identities=17% Similarity=0.158 Sum_probs=108.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+++++||||+|+||++++++|+++|++|++++|+.++... .....++.++.+|++|+++++++++ ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999887543111 1112468999999999999887774 58
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|+||||+|... .++..+++|+.++.++++++.+ .+.++||++||.....+.+....|+.+|++.|.
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~ 165 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIG 165 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHH
Confidence 99999999643 1234577999999998888754 334599999995433444556789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 166 ~~~~l 170 (250)
T PRK12939 166 MTRSL 170 (250)
T ss_pred HHHHH
Confidence 98863
No 165
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.77 E-value=1.4e-18 Score=128.78 Aligned_cols=137 Identities=17% Similarity=0.198 Sum_probs=110.9
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC-cEEEeecC--CCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRS--GRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~--~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
|+++||||+++||.+++++|+++|. .|+++.|+ .+...+ .....++.++++|++++++++.+++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999955 77777887 111110 1123688999999999999888765 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
+|++|||+|... .+...+++|+.+.+.+.+++..++.++||++||.....+.+....|+.+|++++.+++
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~ 160 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQ 160 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHHHHHHH
Confidence 799999999654 2245789999999999999988667799999997656667777899999999999988
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
..
T Consensus 161 ~l 162 (167)
T PF00106_consen 161 SL 162 (167)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 166
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.77 E-value=8.7e-18 Score=131.02 Aligned_cols=131 Identities=18% Similarity=0.142 Sum_probs=104.0
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc------CCCEEEEcc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCV 129 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vi~~a 129 (200)
+++++||||+|+||.+++++|+++|++|++++|+.... ...+++.+|++|+++++++++ ++|++|||+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 57899999999999999999999999999999986542 123578999999998887775 589999999
Q ss_pred ccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 130 GGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 130 g~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
|... .+...+++|+.+..++.+++ ++.+.++||++||.. ..+.+....|+.+|.+.|.+++..
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~ 153 (234)
T PRK07577 77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTW 153 (234)
T ss_pred CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHH
Confidence 9643 12346788999988876665 445677999999953 223345678999999999988763
No 167
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.77 E-value=8e-18 Score=131.84 Aligned_cols=138 Identities=19% Similarity=0.167 Sum_probs=106.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.+++++|||++|++|.++++.|+++|++|+++.|+...... .....++.++.+|++|++++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45799999999999999999999999999888887543111 1123568899999999998887765 5
Q ss_pred CCEEEEccccCCC----------CcccchhhHHHHHHHHHHHHHc----CCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~~~----~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|+|||++|.... +...+++|+.++.++++++.+. +.++||++||.....+......|+.+|.+.|
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~ 163 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVI 163 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHH
Confidence 7999999986431 2345678999999888887643 5568999998533333455778999999999
Q ss_pred HHHHh
Q 029008 188 SPLLA 192 (200)
Q Consensus 188 ~~~~~ 192 (200)
.+++.
T Consensus 164 ~~~~~ 168 (248)
T PRK05557 164 GFTKS 168 (248)
T ss_pred HHHHH
Confidence 88775
No 168
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=6.3e-18 Score=133.75 Aligned_cols=140 Identities=14% Similarity=0.048 Sum_probs=107.2
Q ss_pred CCCCeEEEEccC--chhHHHHHHHHHHCCCcEEEeecCCCCc--ccccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRDSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.++|+++||||+ ++||.+++++|+++|++|++.+|+.... .......++.++++|++|+++++++++ ++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999 7999999999999999999998873211 111122467889999999998887654 48
Q ss_pred CEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHcC--CCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 123 TAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 123 d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~~--~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
|++|||||... +++..+++|+.+.+.+.+++.+.- .+++|++||.....+.+....|+.+|+++
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal 164 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAAL 164 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHH
Confidence 99999999532 124567899999998888875531 25899999854334445567899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+.+..
T Consensus 165 ~~l~~~l 171 (252)
T PRK06079 165 ESSVRYL 171 (252)
T ss_pred HHHHHHH
Confidence 9998864
No 169
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.77 E-value=3.5e-18 Score=135.70 Aligned_cols=140 Identities=18% Similarity=0.129 Sum_probs=104.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
.++|+++||||+++||++++++|+++|++|+++.|+.....+ .....++.++.+|++|+++++++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999999888765332111 1113468899999999998887765
Q ss_pred -CCCEEEEccccCC----------------CCcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcch
Q 029008 121 -GVTAVISCVGGFG----------------SNSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGY 179 (200)
Q Consensus 121 -~~d~vi~~ag~~~----------------~~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y 179 (200)
++|++|||||... .+...+++|+.+.+.+.+.+. +.+.++||++||...-.+.+....|
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGH 165 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccc
Confidence 4799999997431 123356778877776655553 3345689999995433344556789
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
+.+|++++.+++..
T Consensus 166 ~asK~a~~~~~~~l 179 (260)
T PRK08416 166 GTSKAAVETMVKYA 179 (260)
T ss_pred hhhHHHHHHHHHHH
Confidence 99999999999874
No 170
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.77 E-value=5.4e-18 Score=134.08 Aligned_cols=140 Identities=11% Similarity=0.088 Sum_probs=107.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
..+|+++|||++|+||.+++++|++.|++|+++++....... .....++.++++|++|.++++++++ ++|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 457899999999999999999999999999988765432111 1113467889999999999888775 489
Q ss_pred EEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc----C-CCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||||... .++..+++|+.+++.+.+++... + .+++|++||...-.+......|+.+|+++|.
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG 167 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHH
Confidence 9999999632 24567899999999888887432 2 2589999995322334455789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+.+..
T Consensus 168 ~~~~l 172 (253)
T PRK08993 168 VTRLM 172 (253)
T ss_pred HHHHH
Confidence 88764
No 171
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.77 E-value=5.1e-18 Score=131.93 Aligned_cols=138 Identities=17% Similarity=0.135 Sum_probs=105.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-----CCCEEEEccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISCVG 130 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~ag 130 (200)
+++++||||+|++|.+++++|+++|++|++++|+.+.........++.++.+|++|+++++++++ ++|+||||+|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47899999999999999999999999999999987653221122467888999999998887766 4899999998
Q ss_pred cCC------------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCc---CCcCCcchhhhHHhhHHHHHh
Q 029008 131 GFG------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGV---ANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 131 ~~~------------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~---~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
... ++...+++|+.++..+++++... +..+++++||..... +......|+.+|++.+.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~ 160 (225)
T PRK08177 81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRS 160 (225)
T ss_pred ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHH
Confidence 642 12346788999999888887543 335788888842211 123456799999999999986
Q ss_pred h
Q 029008 193 C 193 (200)
Q Consensus 193 ~ 193 (200)
.
T Consensus 161 l 161 (225)
T PRK08177 161 F 161 (225)
T ss_pred H
Confidence 4
No 172
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=5.9e-18 Score=137.64 Aligned_cols=140 Identities=14% Similarity=0.049 Sum_probs=107.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------~ 121 (200)
.++++++||||+|+||.+++++|+++|++|++.++......+ .....++.++.+|++|+++++++++ +
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999998875432111 0113468899999999988887764 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc-----------CCCEEEEEeccccCcCCcCCcchh
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK-----------GVKRFVYISAADFGVANYLLQGYY 180 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~-----------~~~~~v~vSS~~~~~~~~~~~~Y~ 180 (200)
+|++|||||... +++..+++|+.+++++++++... ..++||++||...-.+......|+
T Consensus 90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 169 (306)
T PRK07792 90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYG 169 (306)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHH
Confidence 899999999643 23457889999999998876421 125899999854333445567899
Q ss_pred hhHHhhHHHHHhh
Q 029008 181 EGKDSNLSPLLAC 193 (200)
Q Consensus 181 ~sK~~~E~~~~~~ 193 (200)
.+|++++.+++..
T Consensus 170 asKaal~~l~~~l 182 (306)
T PRK07792 170 AAKAGITALTLSA 182 (306)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 173
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.77 E-value=5.9e-18 Score=136.99 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=107.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---cc-CCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DS-WANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
..+++++||||+|+||.++++.|+++|++|++++|+.+...+ .. ....+..+.+|++|.++++++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999997653211 11 12345667799999998887664 58
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
|++|||+|... .++..+++|+.++.++++++... ..++||++||...-.+.+....|+.+|++++.+
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~ 166 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAF 166 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHHHHH
Confidence 99999999632 22456889999999998887542 236899999954333445567899999999998
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++..
T Consensus 167 ~~~l 170 (296)
T PRK05872 167 ANAL 170 (296)
T ss_pred HHHH
Confidence 8753
No 174
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.77 E-value=1.1e-17 Score=130.53 Aligned_cols=135 Identities=16% Similarity=0.118 Sum_probs=105.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCH-HHHHHHhcCCCEEEEccccC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS-DSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~d~vi~~ag~~ 132 (200)
.++|+++|||++|+||.+++++|+++|++|++++|+..... ..++.++.+|++++ +.+.+.+..+|++|||+|..
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~ 78 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGIL 78 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCC
Confidence 45689999999999999999999999999999998754321 34688999999987 44445556799999999853
Q ss_pred C-----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 133 G-----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 133 ~-----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
. +++..+++|+.++.++++++.. .+.++||++||.....+.+....|+.+|++++.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 153 (235)
T PRK06550 79 DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQ 153 (235)
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHH
Confidence 1 1234688999999999888753 4456899999953333444567899999999988876
No 175
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.77 E-value=5.1e-18 Score=134.02 Aligned_cols=137 Identities=14% Similarity=0.139 Sum_probs=107.2
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
+|+++||||+|+||.++++.|+++|++|++++|+...... .....++.++.+|++|+++++++++ .+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 4789999999999999999999999999999988643211 0113478899999999998887664 579
Q ss_pred EEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||+|... .++..+++|+.+++++++++.+ .+ .++||++||.....+......|+.+|++.+.
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~ 160 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA 160 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence 9999998421 2355789999999999988843 22 3589999986433344556789999999999
Q ss_pred HHHh
Q 029008 189 PLLA 192 (200)
Q Consensus 189 ~~~~ 192 (200)
+++.
T Consensus 161 ~~~~ 164 (252)
T PRK07677 161 MTRT 164 (252)
T ss_pred HHHH
Confidence 8886
No 176
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.77 E-value=4.5e-18 Score=133.33 Aligned_cols=138 Identities=20% Similarity=0.155 Sum_probs=105.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
++++++||||+|+||.++++.|+++|+.|++..|+.++..+ .....++.++.+|++|.++++++++ ++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46799999999999999999999999998888776543211 1113468899999999998887653 58999
Q ss_pred EEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 126 ISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
|||+|... .++..+++|+.++.++++++.+ .+.++||++||.....+.+....|+.+|.+.+.+++
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~ 164 (245)
T PRK12936 85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSK 164 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHH
Confidence 99999632 2345678999999988887642 456799999994322233456789999998888876
Q ss_pred h
Q 029008 192 A 192 (200)
Q Consensus 192 ~ 192 (200)
.
T Consensus 165 ~ 165 (245)
T PRK12936 165 S 165 (245)
T ss_pred H
Confidence 5
No 177
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.77 E-value=3.7e-18 Score=135.91 Aligned_cols=139 Identities=16% Similarity=0.069 Sum_probs=107.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.++++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|+++++++++ +
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999987543211 1112356889999999998887765 4
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
+|++|||+|... .++..+++|+.++.++++++.+. ..++||++||.....+.+....|+.+|++.|.
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~ 166 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDM 166 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence 799999998432 12345789999999998887542 22599999995433445566789999999999
Q ss_pred HHHh
Q 029008 189 PLLA 192 (200)
Q Consensus 189 ~~~~ 192 (200)
+++.
T Consensus 167 l~~~ 170 (264)
T PRK07576 167 LTRT 170 (264)
T ss_pred HHHH
Confidence 9886
No 178
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.77 E-value=2.7e-18 Score=135.72 Aligned_cols=140 Identities=14% Similarity=0.134 Sum_probs=106.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+|+++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|+++++++++ +
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999999999987543111 1112467889999999998887764 6
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcC--CcCCcchhhhHH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVA--NYLLQGYYEGKD 184 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~--~~~~~~Y~~sK~ 184 (200)
+|++|||+|... .++..+++|+.+++.+.+++.. .+ .+++|++||...... ......|+.+|+
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKa 166 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKA 166 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHH
Confidence 899999999642 2345678999999998888743 22 247999988532211 223468999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+++.+++..
T Consensus 167 al~~~~~~l 175 (253)
T PRK05867 167 AVIHLTKAM 175 (253)
T ss_pred HHHHHHHHH
Confidence 999999874
No 179
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.77 E-value=4.6e-18 Score=132.85 Aligned_cols=139 Identities=20% Similarity=0.125 Sum_probs=107.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc---c-CCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---S-WANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
++++++||||+|++|.+++++|+++|++|++++|++...... . ...++.++.+|+.|.+++.++++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 458999999999999999999999999999999976432110 0 01568899999999998887775 689
Q ss_pred EEEEccccCCC----------CcccchhhHHHHHHHHHHHHH---cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 124 AVISCVGGFGS----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~~---~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
+|||++|.... ++..+++|+.+...+++++.+ .+.++||++||.....+......|..+|++.+.+.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~ 164 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFS 164 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHH
Confidence 99999986421 235688899999998888754 34568999998533334445678999999999888
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 165 ~~~ 167 (237)
T PRK07326 165 EAA 167 (237)
T ss_pred HHH
Confidence 764
No 180
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.76 E-value=6.1e-18 Score=133.77 Aligned_cols=140 Identities=17% Similarity=0.099 Sum_probs=109.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.++|+++||||+|+||++++++|+++|++|++++|+.+.... .....++.++.+|++|++++.++++ .
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999998543111 1123468899999999998887765 4
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||+|... .++..+++|+.+++.+.+.+.+ .+.++||++||.....+.+....|+.+|.+.+
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 168 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLT 168 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHH
Confidence 699999999642 2234688999999988866643 56779999999543344455688999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 169 ~~~~~l 174 (256)
T PRK06124 169 GLMRAL 174 (256)
T ss_pred HHHHHH
Confidence 988763
No 181
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1e-17 Score=132.65 Aligned_cols=139 Identities=17% Similarity=0.206 Sum_probs=104.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---------ccCCCCeeEEEccCCCHHHHHHHhc-----
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~----- 120 (200)
++++++||||+|+||.++++.|+++|++|+++.++.....+ .....++.++++|++|+++++++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999998777765432111 0112468889999999999987765
Q ss_pred --CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHcC--CCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~~--~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++|++|||||... .++..+++|+.++..+++++.+.- .+++++++|+..+...+....|+.+|+++
T Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~ 166 (257)
T PRK12744 87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAPV 166 (257)
T ss_pred hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHHH
Confidence 5899999999521 234568899999999999886542 24677664432233445668899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
|.+++..
T Consensus 167 ~~~~~~l 173 (257)
T PRK12744 167 EHFTRAA 173 (257)
T ss_pred HHHHHHH
Confidence 9999875
No 182
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.76 E-value=4.6e-18 Score=134.00 Aligned_cols=138 Identities=17% Similarity=0.191 Sum_probs=104.4
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhcCC---------C
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGV---------T 123 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~---------d 123 (200)
||+++||||+|+||++++++|+++|++|++++|+..+... .....+++++.+|++|+++++++++.+ +
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 4789999999999999999999999999999997632111 112357889999999999998877532 2
Q ss_pred --EEEEccccCCC-----------CcccchhhHHHHHHHHHHHH----Hc-CCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 124 --AVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EK-GVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 124 --~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a~----~~-~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
.+|||+|.... +...+++|+.+...+++.+. +. +.++||++||.....+.++...|+.+|++
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa 160 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG 160 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence 78999985321 23457889888776666553 32 34689999996444455667889999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
.+.+++..
T Consensus 161 ~~~~~~~l 168 (251)
T PRK06924 161 LDMFTQTV 168 (251)
T ss_pred HHHHHHHH
Confidence 99998864
No 183
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.76 E-value=7.1e-18 Score=134.11 Aligned_cols=139 Identities=14% Similarity=0.110 Sum_probs=106.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccC-CCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~-~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
.++++++||||+|+||.+++++|+++|++|++++|+.++... ... ..++.++.+|++|+++++++++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 457899999999999999999999999999999998654211 111 2367889999999998877654
Q ss_pred -CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
.+|++|||||... .+...+++|+.+.+.+.+.+ ++.+.++||++||...-.+.+....|+.+|++
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaa 165 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAG 165 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHH
Confidence 5799999999632 23456788988887776665 33455799999995433344556789999999
Q ss_pred hHHHHHh
Q 029008 186 NLSPLLA 192 (200)
Q Consensus 186 ~E~~~~~ 192 (200)
.+.+++.
T Consensus 166 l~~~~~~ 172 (265)
T PRK07062 166 LLNLVKS 172 (265)
T ss_pred HHHHHHH
Confidence 9988875
No 184
>PRK09186 flagellin modification protein A; Provisional
Probab=99.76 E-value=7.5e-18 Score=133.10 Aligned_cols=138 Identities=13% Similarity=0.125 Sum_probs=101.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHHHHHhcC------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALDG------ 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 121 (200)
.+|+++||||+|+||.++++.|+++|++|++++|+.+...+ ......+.++.+|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999987644211 11123466789999999999887763
Q ss_pred -CCEEEEccccCC-------------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccc-cCcCC---------
Q 029008 122 -VTAVISCVGGFG-------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAAD-FGVAN--------- 173 (200)
Q Consensus 122 -~d~vi~~ag~~~-------------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~-~~~~~--------- 173 (200)
+|+|||||+... .+...+++|+.+.+.+++++ ++.+.++||++||.. +..+.
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~ 162 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM 162 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccccc
Confidence 799999997431 12345678888887665554 445677999999942 21111
Q ss_pred cCCcchhhhHHhhHHHHHh
Q 029008 174 YLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 174 ~~~~~Y~~sK~~~E~~~~~ 192 (200)
.....|+++|++.+.+.+.
T Consensus 163 ~~~~~Y~~sK~a~~~l~~~ 181 (256)
T PRK09186 163 TSPVEYAAIKAGIIHLTKY 181 (256)
T ss_pred CCcchhHHHHHHHHHHHHH
Confidence 1224699999999999864
No 185
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.76 E-value=5.8e-18 Score=133.04 Aligned_cols=139 Identities=21% Similarity=0.241 Sum_probs=104.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----c--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----D--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.+|+++|||++|+||.+++++|+++|++|++..++...... . ....++.++.+|+.|.+++.++++ +
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999998886543221110 0 112357788999999998887664 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|+||||+|... .++..+++|+.+++.+.+++ .+.+.++||++||.....+......|+.+|++.+
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~ 161 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH 161 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHH
Confidence 899999999643 23456789999988766655 4456679999999644444556788999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 162 ~~~~~l 167 (246)
T PRK12938 162 GFTMSL 167 (246)
T ss_pred HHHHHH
Confidence 887753
No 186
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.76 E-value=5.7e-18 Score=133.70 Aligned_cols=140 Identities=11% Similarity=0.040 Sum_probs=108.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.++... .....++.++.+|++|.+++.++++ .
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 356899999999999999999999999999999998643111 1113468899999999998887765 4
Q ss_pred CCEEEEccccCC-----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
+|++|||+|... .++..+++|+.+...+++++ .+.+.+++|++||...-.+.+....|+.+|++.
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~ 164 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAV 164 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence 699999998632 12446789999998776654 345567899999954333455678899999999
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 165 ~~~~~~l 171 (253)
T PRK06172 165 IGLTKSA 171 (253)
T ss_pred HHHHHHH
Confidence 9988864
No 187
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.76 E-value=9.5e-18 Score=130.89 Aligned_cols=141 Identities=21% Similarity=0.262 Sum_probs=112.5
Q ss_pred CCCCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc--c--CCCCeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 50 NVPPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD--S--WANNVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 50 ~~~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
+..+..+++|+||||+||||++|+..|..+|++|++++.-....... . ...+++.+.-|+.. .++..+|.|
T Consensus 21 ~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~-----pl~~evD~I 95 (350)
T KOG1429|consen 21 QVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE-----PLLKEVDQI 95 (350)
T ss_pred cccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh-----HHHHHhhhh
Confidence 34556779999999999999999999999999999999765443221 1 23477777778754 478899999
Q ss_pred EEccccCC------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCC---------------cCCcchhhhH
Q 029008 126 ISCVGGFG------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVAN---------------YLLQGYYEGK 183 (200)
Q Consensus 126 i~~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~---------------~~~~~Y~~sK 183 (200)
||.|++.. .+-+...+|+.++.+++-.|++.+ +||++.|| -+||.+. .+.+.|...|
T Consensus 96 yhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegK 174 (350)
T KOG1429|consen 96 YHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGK 174 (350)
T ss_pred hhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHH
Confidence 99998654 345667899999999999999988 68999887 4688653 3457899999
Q ss_pred HhhHHHHHhhccC
Q 029008 184 DSNLSPLLACYSL 196 (200)
Q Consensus 184 ~~~E~~~~~~~~~ 196 (200)
..+|.++..++..
T Consensus 175 r~aE~L~~~y~k~ 187 (350)
T KOG1429|consen 175 RVAETLCYAYHKQ 187 (350)
T ss_pred HHHHHHHHHhhcc
Confidence 9999999987543
No 188
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1.3e-17 Score=132.35 Aligned_cols=137 Identities=10% Similarity=0.101 Sum_probs=106.8
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
+++++||||+|+||.++++.|+++|++|++++|+...... .....++.++.+|++|++.+.++++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999987543111 0113468899999999999888775 589
Q ss_pred EEEEccccCCC-----------CcccchhhHHHHHHHHHHHHH---cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAASE---KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 124 ~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a~~---~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+||||+|.... +...+++|+.++.++++.+.+ .+.+++|++||.....+..+...|+.+|.+.|.+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~ 160 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGF 160 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence 99999986431 123478999999999988853 2346899999854333455668899999999998
Q ss_pred HHh
Q 029008 190 LLA 192 (200)
Q Consensus 190 ~~~ 192 (200)
++.
T Consensus 161 ~~~ 163 (263)
T PRK06181 161 FDS 163 (263)
T ss_pred HHH
Confidence 875
No 189
>PRK06484 short chain dehydrogenase; Validated
Probab=99.76 E-value=8.7e-18 Score=145.65 Aligned_cols=141 Identities=12% Similarity=0.128 Sum_probs=112.0
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
...+|+++||||+|+||.+++++|+++|++|++++|+.+.... .....++..+.+|++|+++++++++ .+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4468899999999999999999999999999999997543211 1123467789999999999887775 479
Q ss_pred EEEEccccCC-----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 124 AVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 124 ~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
++|||||... .++..+++|+.+++++.+++... +.++||++||...-.+.++...|+.+|++++.++
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~ 425 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLS 425 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHH
Confidence 9999999642 23457899999999999888654 3468999999644445566789999999999998
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 426 ~~l 428 (520)
T PRK06484 426 RSL 428 (520)
T ss_pred HHH
Confidence 864
No 190
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=8.3e-18 Score=132.40 Aligned_cols=141 Identities=15% Similarity=0.098 Sum_probs=106.0
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCC--CHHHHHHHh-----
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLL--SSDSWKEAL----- 119 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~--d~~~~~~~~----- 119 (200)
...+++++|||++|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++ +++++.+++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999998643111 111235778888886 555555443
Q ss_pred --cCCCEEEEccccCC-----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhh
Q 029008 120 --DGVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEG 182 (200)
Q Consensus 120 --~~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~s 182 (200)
..+|+||||||... .++..+++|+.+++++++++ .+.+.++||++||.....+......|+.+
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 168 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS 168 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence 36899999998532 12456789999988888876 34567899999995433344566789999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|+++|.+++..
T Consensus 169 K~a~~~~~~~~ 179 (247)
T PRK08945 169 KFATEGMMQVL 179 (247)
T ss_pred HHHHHHHHHHH
Confidence 99999988863
No 191
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.76 E-value=1.1e-17 Score=131.29 Aligned_cols=140 Identities=14% Similarity=0.055 Sum_probs=107.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEe-ecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASL-SRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
.++++++||||+|+||.++++.|+++|++|+++ .|+.+.... .....++.++.+|++|++++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999998 776543211 1113468899999999999888775
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++|+|||++|... .++..+++|+.+..++++.+.. .+.++||++||...-.+......|+.+|.+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~ 162 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV 162 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHH
Confidence 6899999998642 1245678999999888877753 4567899999853223344567899999998
Q ss_pred HHHHHhh
Q 029008 187 LSPLLAC 193 (200)
Q Consensus 187 E~~~~~~ 193 (200)
+.+++..
T Consensus 163 ~~~~~~~ 169 (247)
T PRK05565 163 NAFTKAL 169 (247)
T ss_pred HHHHHHH
Confidence 8887763
No 192
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1e-17 Score=130.69 Aligned_cols=139 Identities=23% Similarity=0.208 Sum_probs=107.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
..+++++||||+|+||..++++|+++|++|++++|+..+..+ ......++++.+|+.|.++++++++ ++|
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 346899999999999999999999999999999997654211 1122357888899999998887765 589
Q ss_pred EEEEccccCCC----------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 124 AVISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 124 ~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+|||++|.... +...+++|+.++.++++++. +.+.++||++||.....+.++...|+.+|.+.+.+
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~ 164 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARL 164 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHH
Confidence 99999985321 23457789999998888764 45678999999954333345567899999999888
Q ss_pred HHh
Q 029008 190 LLA 192 (200)
Q Consensus 190 ~~~ 192 (200)
++.
T Consensus 165 ~~~ 167 (239)
T PRK12828 165 TEA 167 (239)
T ss_pred HHH
Confidence 875
No 193
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.76 E-value=9e-18 Score=133.11 Aligned_cols=140 Identities=16% Similarity=0.111 Sum_probs=106.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
.++++++||||+|++|.+++++|+++|++|++++|+.+...+ .....++.++.+|++|++++..+++ ++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 356899999999999999999999999999999997543211 1111256889999999998887664 689
Q ss_pred EEEEccccCCC-----------CcccchhhHHHHHHHHHHHH----HcCC-CEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 124 AVISCVGGFGS-----------NSYMYKINGTANINAIRAAS----EKGV-KRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 124 ~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a~----~~~~-~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|||++|.... +...+++|+.++..+++++. ..+. ++|+++||.....+.+....|+.+|.+.|
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~ 168 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVV 168 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHH
Confidence 99999996521 24567899999998888773 3344 57888887432233445567999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 169 ~~~~~l 174 (264)
T PRK12829 169 GLVKSL 174 (264)
T ss_pred HHHHHH
Confidence 988763
No 194
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.76 E-value=7.4e-18 Score=130.66 Aligned_cols=135 Identities=16% Similarity=0.037 Sum_probs=102.4
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc-cCCCCeeEEEccCCCHHHHHHHhc---CCCEEEEcccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGG 131 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~ag~ 131 (200)
+|+++||||+|++|.++++.|+++ ++|++++|+.+..... ....+++++.+|++|+++++++++ ++|+|||++|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 579999999999999999999999 9999999985442111 112368899999999999999887 58999999986
Q ss_pred CCC----------CcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 132 FGS----------NSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 132 ~~~----------~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
... +...+++|+.+...+.+.+ ++. .+++|++||.....+..+...|+.+|.+.|.+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~ 155 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALADA 155 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHH
Confidence 431 2334678888866555544 333 46899999854333445567899999999988775
No 195
>PRK08017 oxidoreductase; Provisional
Probab=99.76 E-value=4.9e-18 Score=134.12 Aligned_cols=136 Identities=17% Similarity=0.027 Sum_probs=104.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--------CCCEEEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAVIS 127 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~d~vi~ 127 (200)
+++++||||+|+||.++++.|+++|++|++++|+.++... ....+++.+.+|+.|.+++..+++ .+|.+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 4689999999999999999999999999999998654221 112357889999999988766553 4689999
Q ss_pred ccccCC----------CCcccchhhHHHHHHH----HHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 128 CVGGFG----------SNSYMYKINGTANINA----IRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 128 ~ag~~~----------~~~~~~~~n~~~~~~~----~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
++|... .++..+++|+.++.++ ++.+.+.+.+++|++||.....+.+....|+.+|.+.|.+.+.
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~ 159 (256)
T PRK08017 81 NAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDA 159 (256)
T ss_pred CCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHH
Confidence 998532 1235678999888775 5556667778999999954334456678899999999998764
No 196
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.76 E-value=6.9e-18 Score=132.93 Aligned_cols=139 Identities=11% Similarity=0.001 Sum_probs=106.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc------cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD------SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++++++||||+|+||++++++|+++|++|+++.|+....... ....++.++.+|+++++++.++++ +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999998877654321110 112357788999999998877665 5
Q ss_pred CCEEEEccccCCC----------CcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+|+||||+|.... ++..+++|+.+..++++++.+. ..++||++||...-.+.++...|+.+|++.|.+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~ 164 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINL 164 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHHH
Confidence 7999999995221 1356789999999988888654 235899999954334556678999999999999
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++..
T Consensus 165 ~~~l 168 (252)
T PRK06077 165 TKYL 168 (252)
T ss_pred HHHH
Confidence 8864
No 197
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.76 E-value=9.4e-18 Score=133.18 Aligned_cols=139 Identities=16% Similarity=0.091 Sum_probs=106.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc--c--ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--R--DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
.+++++||||+|+||.+++++|+++|++|++++|+..... . .....++.++.+|++|+++++++++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998753210 0 1112467889999999999888765 579
Q ss_pred EEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEecccc-CcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADF-GVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~-~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||+|... .++..+++|+.++..+++++.+ .+.++||++||... ..+.+....|+.+|.+.|.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~ 164 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVG 164 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHH
Confidence 9999999632 1234578999999988888653 34568999998432 2334556789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 165 ~~~~l 169 (263)
T PRK08226 165 LTKSL 169 (263)
T ss_pred HHHHH
Confidence 88864
No 198
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.75 E-value=1.8e-17 Score=131.17 Aligned_cols=140 Identities=13% Similarity=0.056 Sum_probs=106.1
Q ss_pred CCCCeEEEEccCc--hhHHHHHHHHHHCCCcEEEeecCCCC-----------cc---c--ccCCCCeeEEEccCCCHHHH
Q 029008 54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRS-----------SL---R--DSWANNVIWHQGNLLSSDSW 115 (200)
Q Consensus 54 ~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~---~--~~~~~~~~~~~~Dl~d~~~~ 115 (200)
.++++++||||+| +||.+++++|+++|++|++++|++.. .. . .....++.++.+|++|.+++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 3568999999995 79999999999999999999987221 00 0 01134689999999999888
Q ss_pred HHHhc-------CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc----CCCEEEEEeccccCcCCc
Q 029008 116 KEALD-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----GVKRFVYISAADFGVANY 174 (200)
Q Consensus 116 ~~~~~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~~~~~v~vSS~~~~~~~~ 174 (200)
.++++ .+|+||||+|... .++..+++|+.++..+++++.+. +.++||++||.....+..
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~ 162 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP 162 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence 77664 4799999998632 12345789999999999887543 346899999953223334
Q ss_pred CCcchhhhHHhhHHHHHhh
Q 029008 175 LLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 175 ~~~~Y~~sK~~~E~~~~~~ 193 (200)
....|+.+|+++|.+++..
T Consensus 163 ~~~~Y~~sK~a~~~~~~~l 181 (256)
T PRK12748 163 DELAYAATKGAIEAFTKSL 181 (256)
T ss_pred CchHHHHHHHHHHHHHHHH
Confidence 5678999999999988763
No 199
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.75 E-value=2.2e-17 Score=131.17 Aligned_cols=140 Identities=19% Similarity=0.094 Sum_probs=107.7
Q ss_pred CCCCeEEEEccCc-hhHHHHHHHHHHCCCcEEEeecCCCCccc------c-cCCCCeeEEEccCCCHHHHHHHhc-----
Q 029008 54 PPSEKLLVLGGNG-FVGSHICREALDRGLTVASLSRSGRSSLR------D-SWANNVIWHQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~-~~~~~~~~~~~Dl~d~~~~~~~~~----- 120 (200)
..+++++||||+| +||.++++.|+++|++|++++|+.++... . ....++.++.+|++|+++++++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999999997 79999999999999999999887643211 0 112368899999999998887764
Q ss_pred --CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcCCcCCcchhhhH
Q 029008 121 --GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 121 --~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
.+|++|||+|... .+...+++|+.+.+.+++++.+ .+ ..+||++||.....+..+...|+.+|
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 174 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAK 174 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHH
Confidence 5799999999532 2345678999999988887643 33 46899998854334555677899999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++++.+++..
T Consensus 175 aal~~~~~~l 184 (262)
T PRK07831 175 AGVMALTRCS 184 (262)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 200
>PRK05865 hypothetical protein; Provisional
Probab=99.75 E-value=1.5e-17 Score=149.34 Aligned_cols=116 Identities=22% Similarity=0.394 Sum_probs=100.5
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS 136 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~ 136 (200)
|+|+||||+||||++++++|+++|++|++++|+.... ...++.++.+|+.|.+.+.++++++|+|||+|+....
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~-- 74 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR-- 74 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence 4799999999999999999999999999999874331 1236889999999999999999999999999986432
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 137 ~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.+++|+.++.+++++|++.++++||++||.. |.++|++++++
T Consensus 75 -~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------K~aaE~ll~~~ 116 (854)
T PRK05865 75 -NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------QPRVEQMLADC 116 (854)
T ss_pred -hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------HHHHHHHHHHc
Confidence 6789999999999999999999999999952 88888888764
No 201
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.75 E-value=2e-17 Score=147.52 Aligned_cols=119 Identities=18% Similarity=0.238 Sum_probs=93.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF 132 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~ 132 (200)
+.|+||||||+||||++|++.|.++|++|... .+|++|.+.+...+. ++|+|||+|+..
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~ 439 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------KGRLEDRSSLLADIRNVKPTHVFNAAGVT 439 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------ccccccHHHHHHHHHhhCCCEEEECCccc
Confidence 45799999999999999999999999987311 136788888888876 689999999865
Q ss_pred C---------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCc----------C------C-cCCcchhhhHHh
Q 029008 133 G---------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGV----------A------N-YLLQGYYEGKDS 185 (200)
Q Consensus 133 ~---------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~----------~------~-~~~~~Y~~sK~~ 185 (200)
. .+...+++|+.++.+++++|++.|++ +|++|| ..|+. + . ++.+.|+.||.+
T Consensus 440 ~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~ 518 (668)
T PLN02260 440 GRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAM 518 (668)
T ss_pred CCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHH
Confidence 2 23456789999999999999999986 555555 44321 1 0 123789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
+|++++.+
T Consensus 519 ~E~~~~~~ 526 (668)
T PLN02260 519 VEELLREY 526 (668)
T ss_pred HHHHHHhh
Confidence 99999875
No 202
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.3e-17 Score=132.00 Aligned_cols=138 Identities=18% Similarity=0.143 Sum_probs=105.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
++++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|+.|++++.++++ ++|+
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999999999999999999999999999987654211 1123468899999999999987775 4899
Q ss_pred EEEccccCCC----------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGFGS----------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
+||++|.... +...+++|+.+.+++++++. +.+.++||++||.. +........|+.+|++.+.++
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~y~~sK~a~~~~~ 159 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVN-GMAALGHPAYSAAKAGLIHYT 159 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchh-hcCCCCCcccHHHHHHHHHHH
Confidence 9999986431 12345789999998888873 34567899999842 112234468999999999998
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 160 ~~~ 162 (257)
T PRK07074 160 KLL 162 (257)
T ss_pred HHH
Confidence 875
No 203
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.1e-17 Score=134.73 Aligned_cols=140 Identities=12% Similarity=0.099 Sum_probs=106.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCC---------CCccc-----ccCCCCeeEEEccCCCHHHHHHHh
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG---------RSSLR-----DSWANNVIWHQGNLLSSDSWKEAL 119 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~ 119 (200)
.++++++||||+++||.+++++|+++|++|++++|+. +.... .....++.++.+|++|++++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3568999999999999999999999999999988764 11000 011346788999999998888766
Q ss_pred c-------CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC------CCEEEEEeccccCcC
Q 029008 120 D-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG------VKRFVYISAADFGVA 172 (200)
Q Consensus 120 ~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~------~~~~v~vSS~~~~~~ 172 (200)
+ .+|++|||||... .++..+++|+.+++.+.+++.. .+ .++||++||...-.+
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 4 5799999999632 2356789999999988877642 11 248999999543345
Q ss_pred CcCCcchhhhHHhhHHHHHhh
Q 029008 173 NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 173 ~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.+....|+.+|++++.+.+..
T Consensus 164 ~~~~~~Y~asKaal~~l~~~l 184 (286)
T PRK07791 164 SVGQGNYSAAKAGIAALTLVA 184 (286)
T ss_pred CCCchhhHHHHHHHHHHHHHH
Confidence 556789999999999988863
No 204
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.75 E-value=5.1e-18 Score=132.11 Aligned_cols=134 Identities=13% Similarity=-0.031 Sum_probs=106.5
Q ss_pred EEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc----cCCCCeeEEEccCCCHHHHHHHhcC---CCEEEEccccC
Q 029008 60 LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALDG---VTAVISCVGGF 132 (200)
Q Consensus 60 lVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~vi~~ag~~ 132 (200)
+||||+|+||.+++++|+++|++|++++|+.+..... ....+++++.+|++|++++.++++. +|++||++|..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 5999999999999999999999999999975432110 0134688999999999999998864 79999999853
Q ss_pred C----------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 133 G----------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 133 ~----------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
. ++...+++|+.+++++.++....+.++||++||.....+.++...|+.+|++++.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGL 151 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHH
Confidence 2 234567899999999999665555679999999543344566788999999999998864
No 205
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.8e-17 Score=131.71 Aligned_cols=139 Identities=16% Similarity=0.155 Sum_probs=107.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhc------CCCE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD------GVTA 124 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~ 124 (200)
.+++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|++|+++++++++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 46799999999999999999999999999999998543211 1123478899999999998887654 5799
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
+|||+|... .....+++|+.++.++++.+.+ .+.+++|++||.....+......|+.+|++.+.++
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 163 (263)
T PRK09072 84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFS 163 (263)
T ss_pred EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHH
Confidence 999998642 1134678999999988888753 34568999998533334445678999999998887
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 164 ~~l 166 (263)
T PRK09072 164 EAL 166 (263)
T ss_pred HHH
Confidence 753
No 206
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.75 E-value=7.9e-18 Score=133.09 Aligned_cols=140 Identities=13% Similarity=0.076 Sum_probs=108.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+++++||||+|+||.+++++|+++|++|++++|+.+.... .....++.++.+|+++++++.++++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999997644211 0113468899999999999888775 5
Q ss_pred CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC--------CCEEEEEeccccCcCCcCCcch
Q 029008 122 VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG--------VKRFVYISAADFGVANYLLQGY 179 (200)
Q Consensus 122 ~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~--------~~~~v~vSS~~~~~~~~~~~~Y 179 (200)
+|++|||+|... .++..+++|+.+.+.+.+++.. .. .+++|++||.....+.+....|
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 166 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY 166 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence 899999999532 2345678999999988877642 21 2589999996433444566789
Q ss_pred hhhHHhhHHHHHhh
Q 029008 180 YEGKDSNLSPLLAC 193 (200)
Q Consensus 180 ~~sK~~~E~~~~~~ 193 (200)
+.+|++.+.+++..
T Consensus 167 ~~sK~a~~~~~~~l 180 (258)
T PRK06949 167 CMSKAAVVHMTRAM 180 (258)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988864
No 207
>PRK07069 short chain dehydrogenase; Validated
Probab=99.75 E-value=1.8e-17 Score=130.42 Aligned_cols=136 Identities=16% Similarity=0.148 Sum_probs=101.6
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc-------c-CCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD-------S-WANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
+++||||+|+||.++++.|+++|++|++++|+.....+. . ....+..+.+|++|+++++++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 489999999999999999999999999999873221110 0 01234568899999998877664 57
Q ss_pred CEEEEccccCC----------CCcccchhhHH----HHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGT----ANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~----~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|++|||+|... ++...+++|+. .+..+++.+++.+.++||++||...-.+.+....|+.+|.+.+.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 99999998643 12345778887 55566677777777899999995433344566789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++.+
T Consensus 161 ~~~~l 165 (251)
T PRK07069 161 LTKSI 165 (251)
T ss_pred HHHHH
Confidence 88853
No 208
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.74 E-value=1.1e-17 Score=133.85 Aligned_cols=139 Identities=9% Similarity=-0.018 Sum_probs=104.3
Q ss_pred CCCeEEEEccCc--hhHHHHHHHHHHCCCcEEEeecCCCCc--cccc--CCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++|+++||||++ +||.+++++|+++|++|++.+|+.... .... ......++.+|++|+++++++++ .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999996 999999999999999999988864211 0110 11223578999999999887764 4
Q ss_pred CCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 122 VTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 122 ~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
+|++|||||... .|+..+++|+.+++.+.+++... ..++||++||.....+.+....|+++|++
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaA 165 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKAA 165 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHHH
Confidence 899999999532 13456789999999888877543 12589999985433344556789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
++.+.+..
T Consensus 166 l~~l~r~l 173 (271)
T PRK06505 166 LEASVRYL 173 (271)
T ss_pred HHHHHHHH
Confidence 99998863
No 209
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.74 E-value=4.9e-17 Score=129.13 Aligned_cols=140 Identities=11% Similarity=0.018 Sum_probs=105.4
Q ss_pred CCCCeEEEEccC--chhHHHHHHHHHHCCCcEEEeecCCCCc--cc----ccCCCCeeEEEccCCCHHHHHHHhc-----
Q 029008 54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LR----DSWANNVIWHQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~----~~~~~~~~~~~~Dl~d~~~~~~~~~----- 120 (200)
..+|+++||||+ ++||.+++++|+++|++|++++|+.... .+ .....++.++.+|++|+++++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 356899999997 8999999999999999999988753221 11 1112467889999999999887664
Q ss_pred --CCCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHcC--CCEEEEEeccccCcCCcCCcchhhh
Q 029008 121 --GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEG 182 (200)
Q Consensus 121 --~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~~--~~~~v~vSS~~~~~~~~~~~~Y~~s 182 (200)
.+|++|||+|... .+...+++|+.+.+.+.+++.+.- ..+||++||.....+.+....|+.+
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as 164 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVA 164 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHH
Confidence 4899999998532 112356889999888777765432 2589999996443444556789999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|++++.+.+..
T Consensus 165 Kaal~~l~~~l 175 (257)
T PRK08594 165 KASLEASVKYL 175 (257)
T ss_pred HHHHHHHHHHH
Confidence 99999998863
No 210
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.74 E-value=2.4e-17 Score=132.12 Aligned_cols=138 Identities=11% Similarity=-0.001 Sum_probs=104.4
Q ss_pred CCCeEEEEccC--chhHHHHHHHHHHCCCcEEEeecCCCC--ccc---ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRS--SLR---DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 55 ~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
.+|+++||||+ ++||.++++.|+++|++|++.+|+... ..+ ...... .++.+|++|+++++++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56899999997 799999999999999999999887421 111 111123 678999999999887764
Q ss_pred CCCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 121 GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 121 ~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
.+|++|||||... .++..+++|+.+++.+.+++... ..++||++||.....+.+....|+.+|+
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 162 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKA 162 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHH
Confidence 4799999999632 13457899999999888877543 1258999998543334445678999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+++.+.+..
T Consensus 163 al~~l~~~l 171 (274)
T PRK08415 163 ALESSVRYL 171 (274)
T ss_pred HHHHHHHHH
Confidence 999998864
No 211
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.74 E-value=2.4e-17 Score=130.88 Aligned_cols=140 Identities=9% Similarity=-0.037 Sum_probs=105.5
Q ss_pred CCCCeEEEEccC--chhHHHHHHHHHHCCCcEEEeecCCCCc--ccc--cCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS--LRD--SWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~--~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
..+|+++||||+ ++||.+++++|+++|++|++++|+.+.. .+. .....+.++.+|++|+++++++++
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 357899999998 5999999999999999999998875321 111 011235688999999999887664
Q ss_pred CCCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 121 GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 121 ~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
.+|++|||||... .++..+++|+.+.+.+.+++... ..++||++||.....+.+....|+.+|+
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKa 167 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKA 167 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHHHH
Confidence 4799999998532 23457899999999988877543 1258999998543333445678999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+++.+.+..
T Consensus 168 al~~l~~~l 176 (258)
T PRK07533 168 ALESSVRYL 176 (258)
T ss_pred HHHHHHHHH
Confidence 999988863
No 212
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.74 E-value=2.8e-17 Score=129.20 Aligned_cols=137 Identities=12% Similarity=0.138 Sum_probs=102.0
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
+++++||||+|+||.+++++|+++|++|+++.++...... .....++.++.+|++|.+++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999998877654322111 1113467889999999999888775 57
Q ss_pred CEEEEccccCCC-----------CcccchhhHHHHHHHHHHHHHcC-------CCEEEEEeccc--cCcCCcCCcchhhh
Q 029008 123 TAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEKG-------VKRFVYISAAD--FGVANYLLQGYYEG 182 (200)
Q Consensus 123 d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a~~~~-------~~~~v~vSS~~--~~~~~~~~~~Y~~s 182 (200)
|+||||+|.... +...+++|+.++.++++++.+.. .++||++||.. ++.+ .....|+.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~~~Y~~s 160 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP-GEYIDYAAS 160 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-CCccchHHH
Confidence 999999996421 13568999999999888875431 23799999943 3322 123569999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|++.|.+++..
T Consensus 161 Kaa~~~~~~~l 171 (248)
T PRK06123 161 KGAIDTMTIGL 171 (248)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 213
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.74 E-value=4e-17 Score=129.58 Aligned_cols=140 Identities=14% Similarity=0.073 Sum_probs=105.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
..+++++||||+|+||.+++++|+++|++|+++.|+...... .....++.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999988885432111 1113467889999999998887764
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcC-CCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
.+|++|||+|... .++..+++|+.+.+.+.+.+ .+.+ .++||++||.....+.++...|+.+|++
T Consensus 85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa 164 (261)
T PRK08936 85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGG 164 (261)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHH
Confidence 4799999999632 12346789988887655544 4444 3689999996434445667799999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
.+.+.+..
T Consensus 165 ~~~~~~~l 172 (261)
T PRK08936 165 VKLMTETL 172 (261)
T ss_pred HHHHHHHH
Confidence 98887763
No 214
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.74 E-value=1.9e-17 Score=130.27 Aligned_cols=138 Identities=15% Similarity=0.136 Sum_probs=100.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
|+|+++||||+|+||..+++.|+++|++|+++.++..+..+ .....++.++.+|++|+++++++++ .
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 46799999999999999999999999999877654322111 1113468899999999988877664 5
Q ss_pred CCEEEEccccCCC-----------CcccchhhHHHHHHHHHHHHHc----C---CCEEEEEeccc--cCcCCcCCcchhh
Q 029008 122 VTAVISCVGGFGS-----------NSYMYKINGTANINAIRAASEK----G---VKRFVYISAAD--FGVANYLLQGYYE 181 (200)
Q Consensus 122 ~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a~~~----~---~~~~v~vSS~~--~~~~~~~~~~Y~~ 181 (200)
+|++|||+|.... +...+++|+.+++.+++++.+. + ..+||++||.. ++.+ .....|+.
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-~~~~~Y~~ 159 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP-NEYVDYAG 159 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-CCCcccHh
Confidence 8999999996421 1345789999998887654332 1 23699999843 2322 22357999
Q ss_pred hHHhhHHHHHhh
Q 029008 182 GKDSNLSPLLAC 193 (200)
Q Consensus 182 sK~~~E~~~~~~ 193 (200)
+|++.+.++++.
T Consensus 160 sK~~~~~~~~~l 171 (248)
T PRK06947 160 SKGAVDTLTLGL 171 (248)
T ss_pred hHHHHHHHHHHH
Confidence 999999888763
No 215
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.74 E-value=2.2e-17 Score=130.93 Aligned_cols=137 Identities=17% Similarity=0.086 Sum_probs=101.9
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c-cCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D-SWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
|+++||||+|+||++++++|+++|++|++++|+.+...+ . ....++.++.+|++|+++++++++ ++|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999999999999987643111 0 112367889999999999887764 58999
Q ss_pred EEccccCC------------CCcccchhhHHHHHHHHHH----HH-HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 126 ISCVGGFG------------SNSYMYKINGTANINAIRA----AS-EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 126 i~~ag~~~------------~~~~~~~~n~~~~~~~~~~----a~-~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|||+|... ++...+.+|+.+...+.+. +. +.+.++||++||.....+.++...|+.+|++++.
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~ 160 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ 160 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence 99999632 1123456777776554433 32 2345689999996444455667789999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+.+..
T Consensus 161 ~~~~l 165 (259)
T PRK08340 161 LAKGV 165 (259)
T ss_pred HHHHH
Confidence 98864
No 216
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.74 E-value=2.1e-17 Score=130.44 Aligned_cols=137 Identities=18% Similarity=0.190 Sum_probs=104.9
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
|+++|||++|+||.+++++|++.|++|+++.|+.....+ .....++.++.+|++|++++.++++ .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999987543111 1113468899999999999887764 4799
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHHHHH----cC-CCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRAASE----KG-VKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
||||+|... .++..+++|+.+++.+++++.+ .+ .++||++||.....+.+....|+.+|++.+.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 160 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL 160 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence 999998632 1235688999999877766543 33 36899999854334455678999999999999
Q ss_pred HHhh
Q 029008 190 LLAC 193 (200)
Q Consensus 190 ~~~~ 193 (200)
++..
T Consensus 161 ~~~l 164 (254)
T TIGR02415 161 TQTA 164 (254)
T ss_pred HHHH
Confidence 8753
No 217
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.1e-17 Score=130.03 Aligned_cols=140 Identities=13% Similarity=0.115 Sum_probs=109.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc---CCCE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD---GVTA 124 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 124 (200)
..+++++|||++|++|.++++.|+++|++|++++|+.++... .....++.++.+|++|++++.++++ .+|+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 356899999999999999999999999999999987653211 1113468899999999999888765 5899
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
+|||+|... .++..+++|+.+.+.+.+++ .+.+.+++|++||.....+......|+.+|.+++.++
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~ 164 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFT 164 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHH
Confidence 999998532 23556889999998888776 3344468999998644444455667899999999988
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
++.
T Consensus 165 ~~l 167 (259)
T PRK06125 165 RAL 167 (259)
T ss_pred HHH
Confidence 864
No 218
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.74 E-value=2.2e-17 Score=131.56 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=100.7
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHH----HHHh------
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSW----KEAL------ 119 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~----~~~~------ 119 (200)
+.++||||+|+||.+++++|+++|++|+++.|+.....+ .....++.++.+|++|.+.+ ++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 579999999999999999999999999998765332111 11123566789999998754 3332
Q ss_pred -cCCCEEEEccccCC-------C--------------CcccchhhHHHHHHHHHHHHHcC----------CCEEEEEecc
Q 029008 120 -DGVTAVISCVGGFG-------S--------------NSYMYKINGTANINAIRAASEKG----------VKRFVYISAA 167 (200)
Q Consensus 120 -~~~d~vi~~ag~~~-------~--------------~~~~~~~n~~~~~~~~~~a~~~~----------~~~~v~vSS~ 167 (200)
.++|+||||||... + +...+++|+.+++.+.+++.+.. ..++|++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 35899999999532 1 22458999999999888764321 2368888885
Q ss_pred ccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 168 DFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 168 ~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
....+.+....|+.+|++++.+++..
T Consensus 162 ~~~~~~~~~~~Y~asK~a~~~~~~~l 187 (267)
T TIGR02685 162 MTDQPLLGFTMYTMAKHALEGLTRSA 187 (267)
T ss_pred hccCCCcccchhHHHHHHHHHHHHHH
Confidence 44445566789999999999998864
No 219
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.74 E-value=3e-17 Score=128.47 Aligned_cols=136 Identities=21% Similarity=0.238 Sum_probs=102.6
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
|+++||||+|+||.+++++|+++|++|+++.|+.....+ .....++.++.+|++|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 579999999999999999999999999998884222111 0113468899999999988877664 489
Q ss_pred EEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 124 AVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
+||||+|... .+...+++|+.++..+++.+ ++.+.++||++||.....+......|+.+|.+.+.+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~ 160 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF 160 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence 9999998642 22445788999988755554 555677999999854333445567899999988887
Q ss_pred HHh
Q 029008 190 LLA 192 (200)
Q Consensus 190 ~~~ 192 (200)
++.
T Consensus 161 ~~~ 163 (242)
T TIGR01829 161 TKA 163 (242)
T ss_pred HHH
Confidence 775
No 220
>PRK05855 short chain dehydrogenase; Validated
Probab=99.74 E-value=2.3e-17 Score=144.13 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=108.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
..++++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|++.++++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 45799999999999999999999999999999997543211 1113468899999999999888775 37
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcC-CCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|++|||||... .+...+++|+.|+.++.+++. +.+ .++||++||...-.+.+....|+.+|++++
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 473 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVL 473 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHH
Confidence 99999999642 234567899999998888753 333 358999999543344556789999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+.+..
T Consensus 474 ~~~~~l 479 (582)
T PRK05855 474 MLSECL 479 (582)
T ss_pred HHHHHH
Confidence 988763
No 221
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=3.1e-17 Score=131.34 Aligned_cols=139 Identities=9% Similarity=-0.013 Sum_probs=105.3
Q ss_pred CCCeEEEEccC--chhHHHHHHHHHHCCCcEEEeecCCCC--ccccc--CCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRS--SLRDS--WANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.+|+++||||+ ++||.+++++|+++|++|+++.|+... ..+.. ......++++|++|+++++++++ .
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999997 899999999999999999988775321 11111 11235678999999999988764 4
Q ss_pred CCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 122 VTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 122 ~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
+|++|||||... .++..+++|+.+++.+++++.+. +.+++|++||.....+.+....|+.+|++
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaa 168 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAA 168 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHH
Confidence 799999998642 23457899999999999887653 23589999985433444556789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
++.+++..
T Consensus 169 l~~l~~~l 176 (272)
T PRK08159 169 LEASVKYL 176 (272)
T ss_pred HHHHHHHH
Confidence 99998864
No 222
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.73 E-value=4.3e-17 Score=136.57 Aligned_cols=136 Identities=16% Similarity=0.081 Sum_probs=102.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc--CCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS--WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
.++|+++||||+|+||++++++|+++|++|++++|+.++..+.. ...++..+.+|++|++++.+.+.++|++|||||.
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 45789999999999999999999999999999998764421111 1224678899999999999999999999999986
Q ss_pred CC-------CCcccchhhHHHHHHHHHHHHH----cC----CCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 132 FG-------SNSYMYKINGTANINAIRAASE----KG----VKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 132 ~~-------~~~~~~~~n~~~~~~~~~~a~~----~~----~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
.. .++..+++|+.++.++++++.+ .+ ...+|++|++ +........|++||++++.+..
T Consensus 256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa--~~~~~~~~~Y~ASKaAl~~l~~ 328 (406)
T PRK07424 256 NVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA--EVNPAFSPLYELSKRALGDLVT 328 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc--cccCCCchHHHHHHHHHHHHHH
Confidence 42 2356789999999999888743 22 1235555543 2222234579999999988643
No 223
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.73 E-value=4.7e-17 Score=129.27 Aligned_cols=139 Identities=12% Similarity=0.043 Sum_probs=105.3
Q ss_pred CCCeEEEEccC--chhHHHHHHHHHHCCCcEEEeecCCCCc-c----cc--cCCCCeeEEEccCCCHHHHHHHhc-----
Q 029008 55 PSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSGRSS-L----RD--SWANNVIWHQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 55 ~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~--~~~~~~~~~~~Dl~d~~~~~~~~~----- 120 (200)
++|+++||||+ ++||.+++++|+++|++|++..|+.+.. . .. ....++.++.+|++|+++++++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 56899999986 7999999999999999998887653321 0 00 012346788999999999987764
Q ss_pred --CCCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhh
Q 029008 121 --GVTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEG 182 (200)
Q Consensus 121 --~~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~s 182 (200)
.+|++|||+|... .++..+++|+.+++.+.+++.+. ..++||++||.....+.+....|+.+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~as 164 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVA 164 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhHH
Confidence 4899999999531 13557899999999888876432 12589999995433445566789999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|++++.+.+..
T Consensus 165 Kaal~~l~~~l 175 (258)
T PRK07370 165 KAALEASVRYL 175 (258)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 224
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.73 E-value=3.3e-17 Score=129.24 Aligned_cols=140 Identities=14% Similarity=0.086 Sum_probs=110.2
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.-.++.||||||++++|+.++.+++++|.++.+.+.+.+...+ .....++..+.+|++|.+++.+..+ .
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3468899999999999999999999999999999988765322 1111368999999999998887664 5
Q ss_pred CCEEEEccccCCC----------CcccchhhHHHHHHHHHH----HHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRA----ASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~----a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+|++|||||.... -+..+++|+.+.+...++ +.+..-++||.++|..+-.+......|++||+++.
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~v 194 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAV 194 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHH
Confidence 8999999996431 145789998888765544 55656679999999655556667789999999998
Q ss_pred HHHHh
Q 029008 188 SPLLA 192 (200)
Q Consensus 188 ~~~~~ 192 (200)
.+-++
T Consensus 195 Gfhes 199 (300)
T KOG1201|consen 195 GFHES 199 (300)
T ss_pred HHHHH
Confidence 77665
No 225
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.73 E-value=6.9e-17 Score=125.33 Aligned_cols=137 Identities=15% Similarity=0.069 Sum_probs=104.7
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-----CCCEEEEccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-----GVTAVISCVG 130 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~ag 130 (200)
|++++||||+|+||.+++++|+++|++|++++|+.+...+ ....+++++.+|++|.+.++++++ .+|++||++|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-HHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence 4789999999999999999999999999999988654221 112356789999999999888642 4899999998
Q ss_pred cCC------------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccc--cCcCC-cCCcchhhhHHhhHHHHHh
Q 029008 131 GFG------------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAAD--FGVAN-YLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 131 ~~~------------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~--~~~~~-~~~~~Y~~sK~~~E~~~~~ 192 (200)
... +++..+++|+.++.++++++.+. ..+++|++||.. ++... .+...|+.+|.+.+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 159 (222)
T PRK06953 80 VYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRA 159 (222)
T ss_pred cccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHH
Confidence 652 12457899999999999888642 235799998842 33222 2224699999999999887
Q ss_pred h
Q 029008 193 C 193 (200)
Q Consensus 193 ~ 193 (200)
+
T Consensus 160 ~ 160 (222)
T PRK06953 160 A 160 (222)
T ss_pred H
Confidence 5
No 226
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.73 E-value=7.4e-17 Score=123.12 Aligned_cols=124 Identities=18% Similarity=0.099 Sum_probs=100.0
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc---CCCEEEEccccCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD---GVTAVISCVGGFG 133 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~ag~~~ 133 (200)
|+++||||+|+||.+++++|.++ ++|++++|+.. .+++|++|+++++++++ ++|++|||+|...
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~ 67 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH 67 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence 47999999999999999999999 99999988642 36789999999988876 6899999998532
Q ss_pred ----------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 134 ----------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 134 ----------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.+...+++|+.++.++++++.+. +..+|+++||.....+.+....|+.+|++.+.+++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l 139 (199)
T PRK07578 68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAA 139 (199)
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 23455789999999999887653 3357999998543344456678999999999988753
No 227
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.73 E-value=3.5e-17 Score=128.09 Aligned_cols=135 Identities=17% Similarity=0.148 Sum_probs=103.2
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|++++.++++ .+|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999998876432111 1113468899999999998887664 47999
Q ss_pred EEccccCC----------CCcccchhhHHHHHHHHHHHH-----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 126 ISCVGGFG----------SNSYMYKINGTANINAIRAAS-----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~-----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
|||+|... +++..+++|+.+++++++++. +.+.++||++||.....+.+....|+.+|++.+.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 160 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT 160 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence 99998542 234568899999998888652 234568999999543334456678999999998887
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 161 ~~l 163 (239)
T TIGR01831 161 KAL 163 (239)
T ss_pred HHH
Confidence 753
No 228
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.73 E-value=2.9e-17 Score=146.03 Aligned_cols=140 Identities=14% Similarity=0.093 Sum_probs=109.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
..+|+++||||+|+||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|.++++++++ +
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 357899999999999999999999999999999998644211 1113468899999999999988776 5
Q ss_pred CCEEEEccccCC------------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 122 VTAVISCVGGFG------------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 122 ~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
+|++|||||... .++..+++|+.++.++++++ ++.+.++||++||...-.+.+....|+.+|++
T Consensus 449 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 528 (657)
T PRK07201 449 VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAA 528 (657)
T ss_pred CCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHH
Confidence 899999999531 12356789999998876665 44566799999995322334456789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
++.+++..
T Consensus 529 ~~~~~~~l 536 (657)
T PRK07201 529 LDAFSDVA 536 (657)
T ss_pred HHHHHHHH
Confidence 99988763
No 229
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=5.1e-17 Score=129.41 Aligned_cols=139 Identities=11% Similarity=0.015 Sum_probs=103.7
Q ss_pred CCCeEEEEccCc--hhHHHHHHHHHHCCCcEEEeecCCCC--cccc--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRS--SLRD--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++|+++||||++ +||.++++.|+++|++|++.+|+... ..+. .....+.++.+|++|+++++++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 468999999985 99999999999999999988886311 1111 112346788999999999998764 4
Q ss_pred CCEEEEccccCC---------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 122 VTAVISCVGGFG---------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 122 ~d~vi~~ag~~~---------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
+|++|||||... .++..+++|+.+.+.+.+++... ..++||++||.....+.+....|+++|+
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKa 164 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA 164 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHHH
Confidence 799999998532 12345688999988888776432 2258999998644444455678999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+++.+++..
T Consensus 165 al~~l~~~l 173 (262)
T PRK07984 165 SLEANVRYM 173 (262)
T ss_pred HHHHHHHHH
Confidence 999998863
No 230
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.73 E-value=6.9e-17 Score=126.54 Aligned_cols=139 Identities=15% Similarity=0.199 Sum_probs=103.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCC--HHHHHHHh-------
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLS--SDSWKEAL------- 119 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d--~~~~~~~~------- 119 (200)
++++++||||+|++|.+++++|+++|++|++++|+.+.... ......+.++.+|+.| .+++.+++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999998754211 0112356778899975 34444433
Q ss_pred -cCCCEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhH
Q 029008 120 -DGVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 120 -~~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
..+|+||||||... ++...+++|+.+++++++++.+ .+..++|++||.....+.+....|+.+|
T Consensus 85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (239)
T PRK08703 85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASK 164 (239)
T ss_pred CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhH
Confidence 45899999999532 1223579999999988887743 3456999999854334445567899999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++++.+++..
T Consensus 165 aa~~~~~~~l 174 (239)
T PRK08703 165 AALNYLCKVA 174 (239)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 231
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.73 E-value=5.4e-17 Score=120.37 Aligned_cols=136 Identities=18% Similarity=0.144 Sum_probs=106.6
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccc--------cCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD--------SWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
++++||||+|++|.+++++|+++|+ .|+++.|+....... ....++.++.+|+++++.++++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999996 678777765432110 113467889999999988887654
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
.+|.+||++|... .++..+++|+.++.++++++.+.+.+++|++||.....+......|+.+|.+.+.++
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~ 160 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALA 160 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHH
Confidence 3699999998532 224568899999999999998878889999998543334456678999999999998
Q ss_pred Hh
Q 029008 191 LA 192 (200)
Q Consensus 191 ~~ 192 (200)
+.
T Consensus 161 ~~ 162 (180)
T smart00822 161 AH 162 (180)
T ss_pred HH
Confidence 65
No 232
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.72 E-value=6.4e-17 Score=129.66 Aligned_cols=136 Identities=18% Similarity=0.105 Sum_probs=102.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc------CCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD------GVT 123 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~------~~d 123 (200)
|+|+++|||+ |+||.+++++|. +|++|++++|+.+...+ . ....++.++.+|++|+++++++++ .+|
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 4678999998 799999999996 89999999997543211 1 112367889999999999887764 489
Q ss_pred EEEEccccCC---CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCC-------------------------
Q 029008 124 AVISCVGGFG---SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVAN------------------------- 173 (200)
Q Consensus 124 ~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~------------------------- 173 (200)
++|||||... +++..+++|+.+++++++++.+. ..+++|++||.......
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQ 158 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccc
Confidence 9999999643 45678999999999999887553 12457788874321110
Q ss_pred -----cCCcchhhhHHhhHHHHHh
Q 029008 174 -----YLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 174 -----~~~~~Y~~sK~~~E~~~~~ 192 (200)
.+...|+.||++.+.+.+.
T Consensus 159 ~~~~~~~~~~Y~asKaa~~~~~~~ 182 (275)
T PRK06940 159 PDAIEDSLHAYQIAKRANALRVMA 182 (275)
T ss_pred ccccCCccchhHHHHHHHHHHHHH
Confidence 1356899999999988875
No 233
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=1.8e-16 Score=125.66 Aligned_cols=140 Identities=15% Similarity=0.058 Sum_probs=104.6
Q ss_pred CCCCeEEEEccCc--hhHHHHHHHHHHCCCcEEEeecCCC---------Cc-c----c--ccCCCCeeEEEccCCCHHHH
Q 029008 54 PPSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGR---------SS-L----R--DSWANNVIWHQGNLLSSDSW 115 (200)
Q Consensus 54 ~~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~---------~~-~----~--~~~~~~~~~~~~Dl~d~~~~ 115 (200)
.++|+++||||+| +||.+++++|+++|++|+++.|... .. . + .....++.++.+|++|.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4678999999984 8999999999999999988754311 00 0 0 11124678899999999998
Q ss_pred HHHhc-------CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCc
Q 029008 116 KEALD-------GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANY 174 (200)
Q Consensus 116 ~~~~~-------~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~ 174 (200)
+++++ .+|++|||+|... .++..+++|+.+.+.+.+++ ++.+.++||++||.....+.+
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 163 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV 163 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC
Confidence 87764 3799999998532 23446889999998775544 334456999999964444455
Q ss_pred CCcchhhhHHhhHHHHHhh
Q 029008 175 LLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 175 ~~~~Y~~sK~~~E~~~~~~ 193 (200)
+...|+.+|++++.++++.
T Consensus 164 ~~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK12859 164 GELAYAATKGAIDALTSSL 182 (256)
T ss_pred CchHHHHHHHHHHHHHHHH
Confidence 6789999999999998764
No 234
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.72 E-value=4.6e-17 Score=127.75 Aligned_cols=137 Identities=16% Similarity=0.103 Sum_probs=100.3
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEee-cCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLS-RSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
|++++||||+|+||.+++++|+++|++|+++. |+.+...+ .....++.++.+|+.|+++++++++ .+
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999998754 44322111 1112467889999999999988776 36
Q ss_pred CEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHHc-------CCCEEEEEeccc--cCcCCcCCcchhhh
Q 029008 123 TAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEK-------GVKRFVYISAAD--FGVANYLLQGYYEG 182 (200)
Q Consensus 123 d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~~-------~~~~~v~vSS~~--~~~~~~~~~~Y~~s 182 (200)
|+|||++|... .++..+++|+.++..+++++... ..++||++||.. ++.+ .....|+.+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~-~~~~~Y~~s 159 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP-GEYVDYAAS 159 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC-CcccchHhH
Confidence 89999999632 12356889999998877766432 135799999953 2322 223579999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|++.|.+++..
T Consensus 160 K~~~~~~~~~l 170 (247)
T PRK09730 160 KGAIDTLTTGL 170 (247)
T ss_pred HHHHHHHHHHH
Confidence 99999988753
No 235
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.72 E-value=5.3e-17 Score=126.71 Aligned_cols=135 Identities=16% Similarity=0.109 Sum_probs=103.5
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
++|||++|+||.+++++|+++|++|++++|+...... .....++.++.+|++|+++++++++ .+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999999999887532111 1112357899999999998888765 36999
Q ss_pred EEccccCC----------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 126 ISCVGGFG----------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
||++|... .++..+++|+.++..+++.+.+ .+.++||++||...-...+....|+.+|.+.+.+++
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~ 160 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK 160 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence 99999642 1245678999999999888864 355699999994322233456789999999998877
Q ss_pred hh
Q 029008 192 AC 193 (200)
Q Consensus 192 ~~ 193 (200)
..
T Consensus 161 ~l 162 (239)
T TIGR01830 161 SL 162 (239)
T ss_pred HH
Confidence 63
No 236
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.72 E-value=6e-17 Score=144.22 Aligned_cols=140 Identities=19% Similarity=0.157 Sum_probs=106.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc---c----cCCCCeeEEEccCCCHHHHHHHhc------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR---D----SWANNVIWHQGNLLSSDSWKEALD------ 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~----~~~~~~~~~~~Dl~d~~~~~~~~~------ 120 (200)
..+|+++||||+|+||.+++++|+++|++|++++|+.+.... . .....+.++.+|++|++++.++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 457899999999999999999999999999999997543211 0 012357789999999999988776
Q ss_pred -CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHH----HHcC-CCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 121 -GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 121 -~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a----~~~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
++|+||||||... .++..+++|+.+.+.+.+.+ ++.+ .++||++||...-.+.+....|+.+|+
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKa 571 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKA 571 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHH
Confidence 5899999999642 12456788988887766554 3333 358999999533334455689999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+.+.+++..
T Consensus 572 A~~~l~r~l 580 (676)
T TIGR02632 572 AEAHLARCL 580 (676)
T ss_pred HHHHHHHHH
Confidence 999998864
No 237
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.72 E-value=5.7e-17 Score=132.68 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=102.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccC-CCCeeEEEccCCC--HHHHHH---HhcC-
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSW-ANNVIWHQGNLLS--SDSWKE---ALDG- 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~-~~~~~~~~~Dl~d--~~~~~~---~~~~- 121 (200)
.++.++||||+|+||.+++++|+++|++|++++|+.++..+ ... ..++..+.+|+++ .+.+++ .+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999999998654211 111 2357788899985 333333 3343
Q ss_pred -CCEEEEccccCCC------------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccc-cCcC-CcCCcchhhh
Q 029008 122 -VTAVISCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAAD-FGVA-NYLLQGYYEG 182 (200)
Q Consensus 122 -~d~vi~~ag~~~~------------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~-~~~~-~~~~~~Y~~s 182 (200)
+|++|||||.... ++..+++|+.++..+.+++. +.+.++||++||.. +..+ .+....|++|
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aS 211 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAAT 211 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHH
Confidence 5699999996421 13467999999998877764 45667999999943 2222 3556889999
Q ss_pred HHhhHHHHHhh
Q 029008 183 KDSNLSPLLAC 193 (200)
Q Consensus 183 K~~~E~~~~~~ 193 (200)
|++++.+.+..
T Consensus 212 Kaal~~~~~~L 222 (320)
T PLN02780 212 KAYIDQFSRCL 222 (320)
T ss_pred HHHHHHHHHHH
Confidence 99999988864
No 238
>PRK06484 short chain dehydrogenase; Validated
Probab=99.72 E-value=9.5e-17 Score=139.17 Aligned_cols=138 Identities=19% Similarity=0.153 Sum_probs=108.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
.+|+++||||+++||.+++++|+++|++|++++|+.+...+ .....++.++.+|++|+++++++++ ++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 56899999999999999999999999999999987654211 1113467789999999999887764 48999
Q ss_pred EEccccCC------------CCcccchhhHHHHHHHHHHHHHc----CCC-EEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 126 ISCVGGFG------------SNSYMYKINGTANINAIRAASEK----GVK-RFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 126 i~~ag~~~------------~~~~~~~~n~~~~~~~~~~a~~~----~~~-~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
|||||... +++..+++|+.+++.+++++... +.+ +||++||...-.+.+....|+.+|++.+.
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~ 163 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS 163 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence 99998621 23457899999999888887543 333 89999995444444566789999999999
Q ss_pred HHHh
Q 029008 189 PLLA 192 (200)
Q Consensus 189 ~~~~ 192 (200)
+++.
T Consensus 164 l~~~ 167 (520)
T PRK06484 164 LTRS 167 (520)
T ss_pred HHHH
Confidence 8875
No 239
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=7.8e-17 Score=128.11 Aligned_cols=139 Identities=10% Similarity=-0.058 Sum_probs=103.3
Q ss_pred CCCeEEEEccCc--hhHHHHHHHHHHCCCcEEEeecCCCCc--cccc--CCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNG--FVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.+|+++||||++ +||.++++.|+++|++|++.+|+.... .... ......++++|++|+++++++++ .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999999997 899999999999999999988763210 1111 11223467899999999887775 4
Q ss_pred CCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 122 VTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 122 ~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
+|++|||+|... .++..+++|+.+.+.+++++... ..++||++||.....+.+....|+.+|++
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 166 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAA 166 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHHHH
Confidence 899999998532 12446899999999888876432 12589999995433344556789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
++.+.+..
T Consensus 167 l~~l~~~l 174 (260)
T PRK06603 167 LEASVKYL 174 (260)
T ss_pred HHHHHHHH
Confidence 99988863
No 240
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.71 E-value=5e-17 Score=128.74 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=106.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCc-EEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
.++|+++||||+|+||..++++|+++|++ |++++|+.+.... .....++.++.+|++|++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999 9999887543211 0113467789999999998887765
Q ss_pred CCCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc----C-CCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 121 GVTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 121 ~~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
++|++|||+|... .++..+++|+.+..++++++.+. + .+++|++||...-.+.+....|+.+|.+
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a 163 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGA 163 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHH
Confidence 5799999998642 12346789999999988887442 2 3579999985322234456789999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
+|.+++..
T Consensus 164 ~~~~~~~~ 171 (260)
T PRK06198 164 LATLTRNA 171 (260)
T ss_pred HHHHHHHH
Confidence 99998864
No 241
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1e-16 Score=128.06 Aligned_cols=136 Identities=14% Similarity=0.018 Sum_probs=102.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
|+++||||+|+||.+++++|+++|++|++++|+.+.... ......+.++.+|++|+++++++++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999999999999999887543111 0111234567899999988876664 479
Q ss_pred EEEEccccCC----------CCcccchhhHHHHHHHHHHHHH----c-CCCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFG----------SNSYMYKINGTANINAIRAASE----K-GVKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~----~-~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||+|... .++..+++|+.+++.+++++.. . ..++||++||.....+.+....|+.+|++.+.
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~ 160 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG 160 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence 9999998532 1245689999999999988642 2 24689999995433344556789999999888
Q ss_pred HHHh
Q 029008 189 PLLA 192 (200)
Q Consensus 189 ~~~~ 192 (200)
+.+.
T Consensus 161 ~~~~ 164 (272)
T PRK07832 161 LSEV 164 (272)
T ss_pred HHHH
Confidence 7764
No 242
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=1.2e-16 Score=127.20 Aligned_cols=139 Identities=14% Similarity=0.059 Sum_probs=101.4
Q ss_pred CCCeEEEEcc--CchhHHHHHHHHHHCCCcEEEeecCCCCc--cccc--CCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS--LRDS--WANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++|+++|||| +++||.+++++|+++|++|++..|..... .+.. .......+++|++|+++++++++ +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5689999997 67999999999999999999887653211 1111 11235678999999999988764 5
Q ss_pred CCEEEEccccCCC---------------CcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhH
Q 029008 122 VTAVISCVGGFGS---------------NSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGK 183 (200)
Q Consensus 122 ~d~vi~~ag~~~~---------------~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK 183 (200)
+|++|||||.... ++..+++|+.+.+.+.+++... +.++||++||...-.+.+....|+.+|
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~asK 164 (261)
T PRK08690 85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAK 164 (261)
T ss_pred CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhHH
Confidence 8999999996421 1234678888888777765432 235899999854333445667899999
Q ss_pred HhhHHHHHhh
Q 029008 184 DSNLSPLLAC 193 (200)
Q Consensus 184 ~~~E~~~~~~ 193 (200)
++++.+.+..
T Consensus 165 aal~~l~~~l 174 (261)
T PRK08690 165 ASLEAGIRFT 174 (261)
T ss_pred HHHHHHHHHH
Confidence 9999988753
No 243
>PRK08324 short chain dehydrogenase; Validated
Probab=99.71 E-value=9.3e-17 Score=143.35 Aligned_cols=140 Identities=16% Similarity=0.189 Sum_probs=110.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccC--CCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
..+++++||||+|+||.++++.|+++|++|++++|+.+.... ... ..++.++.+|++|+++++++++ ++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999998654211 001 1378899999999998887765 58
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHH----HcCC-CEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAAS----EKGV-KRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~----~~~~-~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|+||||+|... .++..+++|+.++..+++++. +++. ++||++||...-.+.+....|+.+|++.+
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~ 579 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAEL 579 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHH
Confidence 99999999542 234568999999999977764 4454 68999999543334456678999999999
Q ss_pred HHHHhh
Q 029008 188 SPLLAC 193 (200)
Q Consensus 188 ~~~~~~ 193 (200)
.+++..
T Consensus 580 ~l~~~l 585 (681)
T PRK08324 580 HLVRQL 585 (681)
T ss_pred HHHHHH
Confidence 998874
No 244
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=1.4e-16 Score=126.62 Aligned_cols=139 Identities=12% Similarity=0.037 Sum_probs=102.9
Q ss_pred CCCeEEEEcc--CchhHHHHHHHHHHCCCcEEEeecCCCC--cccc--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRS--SLRD--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++|+++|||| +++||.+++++|+++|++|++++|.... ..+. .......++.+|++|+++++++++ .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999996 6899999999999999999988654211 1110 111233578899999999987764 4
Q ss_pred CCEEEEccccCC---------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 122 VTAVISCVGGFG---------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 122 ~d~vi~~ag~~~---------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
+|++|||||... .++..+++|+.+.+.+.+++... +.++||++||.....+.+....|+.+|+
T Consensus 85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKa 164 (260)
T PRK06997 85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKA 164 (260)
T ss_pred CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHHH
Confidence 899999998632 12345789999999888887553 2358999998543344455678999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
+++.+.+..
T Consensus 165 al~~l~~~l 173 (260)
T PRK06997 165 SLEASVRYL 173 (260)
T ss_pred HHHHHHHHH
Confidence 999998864
No 245
>PRK05599 hypothetical protein; Provisional
Probab=99.71 E-value=1.9e-16 Score=124.86 Aligned_cols=136 Identities=15% Similarity=0.094 Sum_probs=100.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc------ccCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR------DSWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
|+++||||+++||.+++++|. +|++|++++|+.++..+ ......+.++.+|++|+++++++++ ++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 59999999997654211 1112247889999999988887654 589
Q ss_pred EEEEccccCCCC----------cccchhhHHHHHHHHHH----HHHcC-CCEEEEEeccccCcCCcCCcchhhhHHhhHH
Q 029008 124 AVISCVGGFGSN----------SYMYKINGTANINAIRA----ASEKG-VKRFVYISAADFGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 124 ~vi~~ag~~~~~----------~~~~~~n~~~~~~~~~~----a~~~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~ 188 (200)
++|||+|..... ...+++|+.+...+++. +.+.+ .++||++||.....+.+....|+.+|++.+.
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 159 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA 159 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence 999999964311 13356787777755444 34443 4689999996444445567789999999998
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+.+..
T Consensus 160 ~~~~l 164 (246)
T PRK05599 160 FCQGL 164 (246)
T ss_pred HHHHH
Confidence 88763
No 246
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.71 E-value=7.7e-17 Score=137.56 Aligned_cols=140 Identities=16% Similarity=0.078 Sum_probs=107.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc-cc-cCCCCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RD-SWANNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
..+++++||||+|+||..++++|+++|++|+++++...... .. ....+..++.+|++|+++++++++ ++|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46789999999999999999999999999999988533211 11 011234688999999998887665 5899
Q ss_pred EEEccccCC----------CCcccchhhHHHHHHHHHHHHHcC----CCEEEEEeccccCcCCcCCcchhhhHHhhHHHH
Q 029008 125 VISCVGGFG----------SNSYMYKINGTANINAIRAASEKG----VKRFVYISAADFGVANYLLQGYYEGKDSNLSPL 190 (200)
Q Consensus 125 vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~~----~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~ 190 (200)
||||+|... .++..+++|+.+++++.+++.... .++||++||...-.+......|+.+|++.+.++
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~ 367 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLV 367 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHH
Confidence 999999643 234568899999999999987643 268999998533334456688999999988888
Q ss_pred Hhh
Q 029008 191 LAC 193 (200)
Q Consensus 191 ~~~ 193 (200)
+..
T Consensus 368 ~~l 370 (450)
T PRK08261 368 QAL 370 (450)
T ss_pred HHH
Confidence 764
No 247
>PLN00016 RNA-binding protein; Provisional
Probab=99.70 E-value=1.6e-16 Score=132.80 Aligned_cols=127 Identities=19% Similarity=0.238 Sum_probs=95.6
Q ss_pred CCCCCeEEEE----ccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----------ccCCCCeeEEEccCCCHHHHHHH
Q 029008 53 PPPSEKLLVL----GGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEA 118 (200)
Q Consensus 53 ~~~~~~ilVt----Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~~~Dl~d~~~~~~~ 118 (200)
..++++|+|| ||+|+||.+|+++|+++||+|++++|+...... .....+++++.+|+.| +.++
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence 3466899999 999999999999999999999999998653111 0112358899999876 4444
Q ss_pred h--cCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccCcCCc-C------CcchhhhHHhhHH
Q 029008 119 L--DGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFGVANY-L------LQGYYEGKDSNLS 188 (200)
Q Consensus 119 ~--~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~~~~~-~------~~~Y~~sK~~~E~ 188 (200)
+ .++|+|||+++. +..++.+++++|++.|+++||++|| ..|+.... + ..++. +|..+|+
T Consensus 126 ~~~~~~d~Vi~~~~~----------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~ 194 (378)
T PLN00016 126 VAGAGFDVVYDNNGK----------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEA 194 (378)
T ss_pred hccCCccEEEeCCCC----------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHH
Confidence 4 469999998763 2456788999999999999999999 45664321 1 12233 8999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
++++.
T Consensus 195 ~l~~~ 199 (378)
T PLN00016 195 YLQKL 199 (378)
T ss_pred HHHHc
Confidence 98875
No 248
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.70 E-value=3e-16 Score=136.88 Aligned_cols=113 Identities=18% Similarity=0.229 Sum_probs=90.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC---cEEEeecCCCCcc--c----c--------------------cCCCCeeEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSL--R----D--------------------SWANNVIWH 105 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~----~--------------------~~~~~~~~~ 105 (200)
.+++|+|||||||||++|+++|++.+. +|+++.|...... + . ....++.++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 478999999999999999999998764 6799999754310 0 0 013468999
Q ss_pred EccCCCH------HHHHHHhcCCCEEEEccccCC---CCcccchhhHHHHHHHHHHHHHc-CCCEEEEEecc
Q 029008 106 QGNLLSS------DSWKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEK-GVKRFVYISAA 167 (200)
Q Consensus 106 ~~Dl~d~------~~~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~ 167 (200)
.+|++++ +.++.+.+++|+|||+|+... +++..+++|+.++.+++++|++. +.++||++||.
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa 269 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA 269 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence 9999986 466777788999999999754 34567899999999999999886 46899999994
No 249
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.69 E-value=2.3e-16 Score=128.82 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=87.0
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
++++++||||+++||.+++++|+++| ++|++++|+.++..+ . .....+.++.+|++|.++++++++ +
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 56799999999999999999999999 999999987643211 1 112467889999999998887653 4
Q ss_pred CCEEEEccccCC-----------CCcccchhhHHHHHHHHHHHH----HcC--CCEEEEEecc
Q 029008 122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKG--VKRFVYISAA 167 (200)
Q Consensus 122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~----~~~--~~~~v~vSS~ 167 (200)
+|++|||||... .++..+++|+.+++.+.+.+. +.+ .++||++||.
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~ 144 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSI 144 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecC
Confidence 899999999632 123468999999988866653 332 3699999994
No 250
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.69 E-value=2.6e-16 Score=124.80 Aligned_cols=138 Identities=13% Similarity=0.035 Sum_probs=102.7
Q ss_pred CCCeEEEEcc--CchhHHHHHHHHHHCCCcEEEeecCCCC-ccc---ccCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 55 PSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRS-SLR---DSWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 55 ~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.+|+++|||| +++||.+++++|+++|++|++++|+... ..+ .....++.++.+|++|+++++++++ +
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999 8999999999999999999999876421 111 1112357789999999998887654 5
Q ss_pred CCEEEEccccCC--------------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 122 VTAVISCVGGFG--------------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 122 ~d~vi~~ag~~~--------------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
+|++|||||... .+...+++|+.+++.+.+++... ..++||++|+.. ....+....|+.||++
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~~~~~~~~~Y~asKaa 164 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-TVAWPAYDWMGVAKAA 164 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-cccCCccchhHHHHHH
Confidence 899999999642 11235789999999888877543 225899998642 2223345678999999
Q ss_pred hHHHHHhh
Q 029008 186 NLSPLLAC 193 (200)
Q Consensus 186 ~E~~~~~~ 193 (200)
++.+.+..
T Consensus 165 l~~l~~~l 172 (256)
T PRK07889 165 LESTNRYL 172 (256)
T ss_pred HHHHHHHH
Confidence 99988863
No 251
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.2e-16 Score=126.79 Aligned_cols=139 Identities=18% Similarity=0.101 Sum_probs=102.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC---------ccc------ccCCCCeeEEEccCCCHHHHHHH
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS---------SLR------DSWANNVIWHQGNLLSSDSWKEA 118 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~------~~~~~~~~~~~~Dl~d~~~~~~~ 118 (200)
..+|+++||||+++||.+++++|++.|++|++++|+... ..+ .....++.++.+|++|+++++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 357899999999999999999999999999999987421 000 01123577899999999998877
Q ss_pred hc-------CCCEEEEcc-ccC------C--------CCcccchhhHHHHHHHHHHHHH----cCCCEEEEEecccc--C
Q 029008 119 LD-------GVTAVISCV-GGF------G--------SNSYMYKINGTANINAIRAASE----KGVKRFVYISAADF--G 170 (200)
Q Consensus 119 ~~-------~~d~vi~~a-g~~------~--------~~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~--~ 170 (200)
++ .+|++|||+ |.. . .+...+++|+.+.+.+.+++.. .+..+||++||... .
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~ 165 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence 64 489999999 631 1 1234568899998887777643 33468999998432 2
Q ss_pred c-CCcCCcchhhhHHhhHHHHHh
Q 029008 171 V-ANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 171 ~-~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
. +......|+.+|+++..+.+.
T Consensus 166 ~~~~~~~~~Y~asKaal~~lt~~ 188 (305)
T PRK08303 166 ATHYRLSVFYDLAKTSVNRLAFS 188 (305)
T ss_pred CcCCCCcchhHHHHHHHHHHHHH
Confidence 1 122356799999999998875
No 252
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.69 E-value=5.8e-16 Score=120.95 Aligned_cols=134 Identities=20% Similarity=0.214 Sum_probs=98.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHh---cCCCEEEEcccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL---DGVTAVISCVGG 131 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~d~vi~~ag~ 131 (200)
|+++||||+|+||.+++++|+++| +.|....|+.... ....++.++++|++|.++++++. .++|++|||+|.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~ 77 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM 77 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence 589999999999999999999986 4555555544332 12357889999999998877754 468999999996
Q ss_pred CCC----------------CcccchhhHHHHHHHHHHHHH----cCCCEEEEEecccc---CcCCcCCcchhhhHHhhHH
Q 029008 132 FGS----------------NSYMYKINGTANINAIRAASE----KGVKRFVYISAADF---GVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 132 ~~~----------------~~~~~~~n~~~~~~~~~~a~~----~~~~~~v~vSS~~~---~~~~~~~~~Y~~sK~~~E~ 188 (200)
... +...+++|+.+...+.+.+.. .+.++++++||... ..+.++...|+.+|++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~ 157 (235)
T PRK09009 78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNM 157 (235)
T ss_pred ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHH
Confidence 421 123578899999877777644 33468999987321 1122345689999999999
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
+++..
T Consensus 158 ~~~~l 162 (235)
T PRK09009 158 FLKTL 162 (235)
T ss_pred HHHHH
Confidence 88863
No 253
>PRK12320 hypothetical protein; Provisional
Probab=99.68 E-value=7.1e-16 Score=136.16 Aligned_cols=120 Identities=21% Similarity=0.210 Sum_probs=95.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS 136 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~ 136 (200)
|+|+||||+||||++++++|+++|++|++++|..... ...+++++.+|++|+. +.+++.++|+|||+++... .
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~--~ 73 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDT--S 73 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCc--c
Confidence 4799999999999999999999999999999865431 1247889999999985 7888889999999998642 1
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 137 ~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
....+|+.++.+++++|++.|+ ++|++||. +|.+ ..|. ..|+++.++
T Consensus 74 ~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~-~G~~----~~~~----~aE~ll~~~ 120 (699)
T PRK12320 74 APGGVGITGLAHVANAAARAGA-RLLFVSQA-AGRP----ELYR----QAETLVSTG 120 (699)
T ss_pred chhhHHHHHHHHHHHHHHHcCC-eEEEEECC-CCCC----cccc----HHHHHHHhc
Confidence 2346899999999999999997 79999985 3322 1232 467777654
No 254
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.68 E-value=1e-16 Score=126.95 Aligned_cols=136 Identities=17% Similarity=0.119 Sum_probs=101.9
Q ss_pred eEEEEccCchhHHHHHHHHHH----CCCcEEEeecCCCCccc---c--c--CCCCeeEEEccCCCHHHHHHHhcC-----
Q 029008 58 KLLVLGGNGFVGSHICREALD----RGLTVASLSRSGRSSLR---D--S--WANNVIWHQGNLLSSDSWKEALDG----- 121 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~---~--~--~~~~~~~~~~Dl~d~~~~~~~~~~----- 121 (200)
.++||||+++||.+++++|++ +|++|+++.|+.+...+ . . ...++.++.+|++|+++++++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 79999999997653211 0 0 123688899999999988876642
Q ss_pred ------CCEEEEccccCCC-------------CcccchhhHHHHHHHHHHHHHc-----C-CCEEEEEeccccCcCCcCC
Q 029008 122 ------VTAVISCVGGFGS-------------NSYMYKINGTANINAIRAASEK-----G-VKRFVYISAADFGVANYLL 176 (200)
Q Consensus 122 ------~d~vi~~ag~~~~-------------~~~~~~~n~~~~~~~~~~a~~~-----~-~~~~v~vSS~~~~~~~~~~ 176 (200)
.|++|||||.... ++..+++|+.+++.+.+.+.+. + .++||++||...-.+.+..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 2599999985321 1246789999998877766432 2 2589999995433444556
Q ss_pred cchhhhHHhhHHHHHhh
Q 029008 177 QGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 177 ~~Y~~sK~~~E~~~~~~ 193 (200)
..|+.+|++.+.+++..
T Consensus 162 ~~Y~asKaal~~l~~~l 178 (256)
T TIGR01500 162 ALYCAGKAARDMLFQVL 178 (256)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 78999999999998863
No 255
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.68 E-value=1.9e-16 Score=117.53 Aligned_cols=135 Identities=15% Similarity=0.135 Sum_probs=107.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccC--CCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSW--ANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+.+..+||||+++||+++++.|.+.|++|.+.+++.....+ ... ..+-..+.+|+.++++++..++ .+
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 466899999999999999999999999999999988664222 111 2356788999999998887665 47
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc------CCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK------GVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~------~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
++++||||... +|+..+.+|+.|++.+-+++.+. +.-+||++||.+.-..+...+.|.++|..+
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~Gv 171 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGV 171 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCce
Confidence 99999999753 67888999999999988887543 223899999987777778888999988754
Q ss_pred HH
Q 029008 187 LS 188 (200)
Q Consensus 187 E~ 188 (200)
-.
T Consensus 172 Ig 173 (256)
T KOG1200|consen 172 IG 173 (256)
T ss_pred ee
Confidence 43
No 256
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.68 E-value=9.9e-16 Score=122.26 Aligned_cols=142 Identities=15% Similarity=0.057 Sum_probs=107.7
Q ss_pred CCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--------ccCCCCeeEEEccCCCHHHHHHHhc---
Q 029008 52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--------DSWANNVIWHQGNLLSSDSWKEALD--- 120 (200)
Q Consensus 52 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~Dl~d~~~~~~~~~--- 120 (200)
....+|+++|||++.+||++++++|++.|++|++.+|+.+...+ .....++..+.+|+++.++++++++
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999998765211 1113468899999998877666543
Q ss_pred -----CCCEEEEccccCC-----------CCcccchhhHHH-HHHHHHHHH----HcCCCEEEEEeccccCcCCcCC-cc
Q 029008 121 -----GVTAVISCVGGFG-----------SNSYMYKINGTA-NINAIRAAS----EKGVKRFVYISAADFGVANYLL-QG 178 (200)
Q Consensus 121 -----~~d~vi~~ag~~~-----------~~~~~~~~n~~~-~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~-~~ 178 (200)
++|++|||||... .|+..+++|+.| .+.+.+++. +.+...++++||..+.....+. ..
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~ 163 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVA 163 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCccc
Confidence 5899999999532 346778999995 555555543 3345689999986544443333 79
Q ss_pred hhhhHHhhHHHHHhh
Q 029008 179 YYEGKDSNLSPLLAC 193 (200)
Q Consensus 179 Y~~sK~~~E~~~~~~ 193 (200)
|+.+|++++++.+..
T Consensus 164 Y~~sK~al~~ltr~l 178 (270)
T KOG0725|consen 164 YGVSKAALLQLTRSL 178 (270)
T ss_pred chhHHHHHHHHHHHH
Confidence 999999999999863
No 257
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.68 E-value=6.8e-16 Score=120.46 Aligned_cols=135 Identities=13% Similarity=0.050 Sum_probs=100.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc--------C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD--------G 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~--------~ 121 (200)
.+++++||||+++||.+++++|+++|++|+++.|+.+...+ .....++..+.+|+.|+++++++++ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 56899999999999999999999999999999997654211 1113457788999999998887653 5
Q ss_pred CCEEEEccccCC-----------CCcccchhhHHHHHHHHHHH----HHcC-CCEEEEEeccccCcCCcCCcchhhhHHh
Q 029008 122 VTAVISCVGGFG-----------SNSYMYKINGTANINAIRAA----SEKG-VKRFVYISAADFGVANYLLQGYYEGKDS 185 (200)
Q Consensus 122 ~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a----~~~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~ 185 (200)
+|++|||+|... .+...+++|+.+.+.+.+.+ .+.+ .++||++||.. + .+....|+.+|++
T Consensus 84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~-~--~~~~~~Y~asKaa 160 (227)
T PRK08862 84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHD-D--HQDLTGVESSNAL 160 (227)
T ss_pred CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCC-C--CCCcchhHHHHHH
Confidence 899999997421 11234567777777665554 3333 46899999842 2 2346789999999
Q ss_pred hHHHHHh
Q 029008 186 NLSPLLA 192 (200)
Q Consensus 186 ~E~~~~~ 192 (200)
++.+.+.
T Consensus 161 l~~~~~~ 167 (227)
T PRK08862 161 VSGFTHS 167 (227)
T ss_pred HHHHHHH
Confidence 9998876
No 258
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=3.7e-16 Score=122.12 Aligned_cols=139 Identities=19% Similarity=0.162 Sum_probs=104.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc----cCCCCeeEEEccCCCHHHHHHHhc-------CCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD----SWANNVIWHQGNLLSSDSWKEALD-------GVT 123 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 123 (200)
++++++||||+|+||.++++.|+++|++|++++|+.+..... ....++.++.+|++|+++++++++ .+|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 568999999999999999999999999999999976532110 112368899999999988877654 469
Q ss_pred EEEEccccCC--------CCcccchhhHHHHHHHHHHHHHc--CCCEEEEEecccc-CcCCcCCcchhhhHHhhHHHHHh
Q 029008 124 AVISCVGGFG--------SNSYMYKINGTANINAIRAASEK--GVKRFVYISAADF-GVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 124 ~vi~~ag~~~--------~~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~-~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
.+||++|... ..+..+++|+.+...+++.+.+. ..++||++||... ..+.++...|+.+|++.+.+++.
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~ 163 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEI 163 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHH
Confidence 9999998542 12345788889888888877553 2357999998532 22334557799999999887775
Q ss_pred h
Q 029008 193 C 193 (200)
Q Consensus 193 ~ 193 (200)
.
T Consensus 164 ~ 164 (238)
T PRK05786 164 L 164 (238)
T ss_pred H
Confidence 3
No 259
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=2.6e-16 Score=123.83 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=103.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccCCCCeeEEEccCCCHHHHHHHhc-------CC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSWANNVIWHQGNLLSSDSWKEALD-------GV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 122 (200)
.+++++|||++|+||..+++.|+++|++|++++|+.++... .....++.++.+|++|+++++++++ .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999999999999999987643111 1113467889999999988876654 47
Q ss_pred CEEEEccccCCC-------------------CcccchhhHHHHHHHHHHHH----Hc-CCCEEEEEeccccCcCCcCCcc
Q 029008 123 TAVISCVGGFGS-------------------NSYMYKINGTANINAIRAAS----EK-GVKRFVYISAADFGVANYLLQG 178 (200)
Q Consensus 123 d~vi~~ag~~~~-------------------~~~~~~~n~~~~~~~~~~a~----~~-~~~~~v~vSS~~~~~~~~~~~~ 178 (200)
|+||||+|.... +...+++|+.++..+.+.+. +. ...+||++||.. ..+.++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~~ 162 (253)
T PRK08217 84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTN 162 (253)
T ss_pred CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCch
Confidence 999999985321 12356789999987766543 22 234789998843 223456788
Q ss_pred hhhhHHhhHHHHHhh
Q 029008 179 YYEGKDSNLSPLLAC 193 (200)
Q Consensus 179 Y~~sK~~~E~~~~~~ 193 (200)
|+.+|++.|.+++.+
T Consensus 163 Y~~sK~a~~~l~~~l 177 (253)
T PRK08217 163 YSASKAGVAAMTVTW 177 (253)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999999998875
No 260
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.67 E-value=1.4e-16 Score=119.86 Aligned_cols=138 Identities=14% Similarity=0.059 Sum_probs=107.6
Q ss_pred CCCeEEEEccC-chhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--------CCCEE
Q 029008 55 PSEKLLVLGGN-GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--------GVTAV 125 (200)
Q Consensus 55 ~~~~ilVtGa~-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~d~v 125 (200)
..|.|+|||++ |+||.++++++.++|+.|++..|+.++-.+.....++...+.|+++++++..... .+|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 45789999865 9999999999999999999999998774443335678999999999998887653 37999
Q ss_pred EEccccCC----------CCcccchhhHHHHHHHHHHHHHc---CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 126 ISCVGGFG----------SNSYMYKINGTANINAIRAASEK---GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 126 i~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~---~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
|||||..= +-+..|++|+.|..+.-++.... ..+.||++.|...-.+-+..+.|.+||+++-++.+.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~t 165 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYART 165 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhh
Confidence 99999521 12567899999988777665422 245899999964334445567899999999888765
No 261
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.66 E-value=1.3e-15 Score=120.84 Aligned_cols=140 Identities=18% Similarity=0.120 Sum_probs=111.2
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc--cccC-CCCeeEEEccCCCHHHHHHHhc---------
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL--RDSW-ANNVIWHQGNLLSSDSWKEALD--------- 120 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~-~~~~~~~~~Dl~d~~~~~~~~~--------- 120 (200)
+...|.|+|||+..+.|..++++|.++|+.|++..-.++... .... .++...++.|++++++++++.+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 356789999999999999999999999999999885544321 1112 5678888999999999998765
Q ss_pred CCCEEEEccccCC-----------CCcccchhhHHHHHHHHHHHH---HcCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 121 GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAAS---EKGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 121 ~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~---~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
+.-.||||||.+. ++...+++|..|+..+.++.. +...+|+|++||.....+.+...+|+.||+++
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~aV 185 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKFAV 185 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHHHH
Confidence 4689999999532 335678999999998777753 22346999999977677777889999999999
Q ss_pred HHHHHh
Q 029008 187 LSPLLA 192 (200)
Q Consensus 187 E~~~~~ 192 (200)
|.+...
T Consensus 186 eaf~D~ 191 (322)
T KOG1610|consen 186 EAFSDS 191 (322)
T ss_pred HHHHHH
Confidence 987654
No 262
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.66 E-value=2.1e-15 Score=121.26 Aligned_cols=99 Identities=29% Similarity=0.379 Sum_probs=83.2
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHh------cC-CCEEEEccc
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL------DG-VTAVISCVG 130 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~-~d~vi~~ag 130 (200)
+|+||||||++|++++++|+++|++|++++|+++... ..+++.+.+|+.|++++.+++ ++ +|.++|+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 5899999999999999999999999999999876532 246777889999999999998 57 999999987
Q ss_pred cCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc
Q 029008 131 GFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167 (200)
Q Consensus 131 ~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~ 167 (200)
.... ......+++++|++.|+++||++||.
T Consensus 77 ~~~~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~ 106 (285)
T TIGR03649 77 PIPD-------LAPPMIKFIDFARSKGVRRFVLLSAS 106 (285)
T ss_pred CCCC-------hhHHHHHHHHHHHHcCCCEEEEeecc
Confidence 5321 12345688999999999999999985
No 263
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.66 E-value=4.6e-16 Score=118.06 Aligned_cols=139 Identities=19% Similarity=0.196 Sum_probs=108.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-----ccC-CCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-----DSW-ANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~-~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
..+|++++||+.|+||+.++++|+++|.++.++..+.+.... ... ...+.|+++|+++..+++++|+
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999999988888766554221 112 3478999999999999998886
Q ss_pred CCCEEEEccccCC--CCcccchhhHHHHHH----HHHHHHH-cC--CCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 121 GVTAVISCVGGFG--SNSYMYKINGTANIN----AIRAASE-KG--VKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 121 ~~d~vi~~ag~~~--~~~~~~~~n~~~~~~----~~~~a~~-~~--~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
.+|++||+||... +|+..+.+|+.|..+ .++++.+ +| .+-||++||...-.|-+-...|++||+.+-.+-|
T Consensus 83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTR 162 (261)
T KOG4169|consen 83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTR 162 (261)
T ss_pred ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeeh
Confidence 4799999999865 578889999777665 4455533 32 3479999996555566667899999999888777
Q ss_pred h
Q 029008 192 A 192 (200)
Q Consensus 192 ~ 192 (200)
+
T Consensus 163 S 163 (261)
T KOG4169|consen 163 S 163 (261)
T ss_pred h
Confidence 6
No 264
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.66 E-value=6e-16 Score=121.00 Aligned_cols=129 Identities=26% Similarity=0.238 Sum_probs=98.2
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc-cccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCCCcc
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSY 137 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~ 137 (200)
|+|+||||.+|+.+++.|++.+++|+++.|+..... ......+++++.+|+.|++++.++|+++|+||.+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~---- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH---- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC----
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch----
Confidence 799999999999999999999999999999874322 122235778999999999999999999999999887643
Q ss_pred cchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcC--CcCCcchhhhHHhhHHHHHhh
Q 029008 138 MYKINGTANINAIRAASEKGVKRFVYISAA-DFGVA--NYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 138 ~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~--~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
........+++++|+++|+++||+.|.. .+... ..|...+...|..+|+.+++.
T Consensus 77 --~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~ 133 (233)
T PF05368_consen 77 --PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRES 133 (233)
T ss_dssp --CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHC
T ss_pred --hhhhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhhc
Confidence 2334556789999999999999975543 22111 223345667899999999885
No 265
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=7.5e-16 Score=115.24 Aligned_cols=138 Identities=17% Similarity=0.107 Sum_probs=104.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc-CCCCeeEEEccCCCHHHHHHHhc-------CCCEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALD-------GVTAV 125 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v 125 (200)
..+.+||||||+.+||.+++++|.+.|.+|++..|+..+..+.. ....+....+|+.|.++.+++++ ..+++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 45779999999999999999999999999999999976643322 23467788899999988777664 47999
Q ss_pred EEccccCCC------------CcccchhhHHHHHHHHHHHH----HcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHH
Q 029008 126 ISCVGGFGS------------NSYMYKINGTANINAIRAAS----EKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSP 189 (200)
Q Consensus 126 i~~ag~~~~------------~~~~~~~n~~~~~~~~~~a~----~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~ 189 (200)
|||||.... .+....+|..++..+..+.. ++.-.-||.+||.-.-.|......|+++|+++-.+
T Consensus 83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsy 162 (245)
T COG3967 83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSY 162 (245)
T ss_pred eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHH
Confidence 999996431 12345789998887776654 44445799999943334555566899999988765
Q ss_pred HH
Q 029008 190 LL 191 (200)
Q Consensus 190 ~~ 191 (200)
-.
T Consensus 163 t~ 164 (245)
T COG3967 163 TL 164 (245)
T ss_pred HH
Confidence 43
No 266
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=1.4e-15 Score=119.00 Aligned_cols=139 Identities=19% Similarity=0.230 Sum_probs=112.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc---------cccCCCCeeEEEccCCCHHHHHHHhc--CCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---------RDSWANNVIWHQGNLLSSDSWKEALD--GVT 123 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d 123 (200)
++|++||||-||.-|.+|++.|++.||.|+++.|+..... ......++.++.+|++|...+.++++ ++|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 4689999999999999999999999999999999854311 11223458899999999999999997 579
Q ss_pred EEEEcccc------CCCCcccchhhHHHHHHHHHHHHHcCC--CEEEEEeccc-cCc----------CCcCCcchhhhHH
Q 029008 124 AVISCVGG------FGSNSYMYKINGTANINAIRAASEKGV--KRFVYISAAD-FGV----------ANYLLQGYYEGKD 184 (200)
Q Consensus 124 ~vi~~ag~------~~~~~~~~~~n~~~~~~~~~~a~~~~~--~~~v~vSS~~-~~~----------~~~~~~~Y~~sK~ 184 (200)
.|+|.++. +..+....+++..|+.+++++.+-.+. -+|...||+. ||. |-.|.++|+.+|.
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKl 160 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 160 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHH
Confidence 99999985 346777889999999999999988764 3788888753 553 2357899999999
Q ss_pred hhHHHHHhh
Q 029008 185 SNLSPLLAC 193 (200)
Q Consensus 185 ~~E~~~~~~ 193 (200)
.+--+..++
T Consensus 161 Ya~W~tvNY 169 (345)
T COG1089 161 YAYWITVNY 169 (345)
T ss_pred HHHheeeeh
Confidence 887766654
No 267
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.65 E-value=1.5e-15 Score=123.18 Aligned_cols=140 Identities=7% Similarity=-0.061 Sum_probs=98.1
Q ss_pred CCCCCeEEEEcc--CchhHHHHHHHHHHCCCcEEEeecCCCCc------cc-----c---cC----CCCeeEEEccC--C
Q 029008 53 PPPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSS------LR-----D---SW----ANNVIWHQGNL--L 110 (200)
Q Consensus 53 ~~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~-----~---~~----~~~~~~~~~Dl--~ 110 (200)
..++|+++|||| +++||.++++.|+++|++|++ .|+.++. .. . .. .....++.+|+ .
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 357899999999 799999999999999999988 5542210 00 0 00 11246788888 3
Q ss_pred CHH------------------HHHHHhc-------CCCEEEEccccC----C--------CCcccchhhHHHHHHHHHHH
Q 029008 111 SSD------------------SWKEALD-------GVTAVISCVGGF----G--------SNSYMYKINGTANINAIRAA 153 (200)
Q Consensus 111 d~~------------------~~~~~~~-------~~d~vi~~ag~~----~--------~~~~~~~~n~~~~~~~~~~a 153 (200)
+++ +++++++ ++|++|||||.. . .|+..+++|+.+.+.+.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 333 5565543 489999999631 1 34567899999999988887
Q ss_pred HHcC--CCEEEEEeccccCcCCcCC-cchhhhHHhhHHHHHhh
Q 029008 154 SEKG--VKRFVYISAADFGVANYLL-QGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 154 ~~~~--~~~~v~vSS~~~~~~~~~~-~~Y~~sK~~~E~~~~~~ 193 (200)
...- -.+||++||.....+.+.. ..|+.+|++++.+.+..
T Consensus 165 ~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~l 207 (303)
T PLN02730 165 GPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVL 207 (303)
T ss_pred HHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHH
Confidence 5431 2689999995322333323 47999999999998864
No 268
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.64 E-value=2.3e-15 Score=143.56 Aligned_cols=139 Identities=22% Similarity=0.331 Sum_probs=107.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCC----CcEEEeecCCCCccc---------------ccCCCCeeEEEccCCC----
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLR---------------DSWANNVIWHQGNLLS---- 111 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~---------------~~~~~~~~~~~~Dl~d---- 111 (200)
..++|+|||++||+|.+++++|+++| ++|+++.|....... .....+++++.+|+.+
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35799999999999999999999987 799999997543110 0112378999999964
Q ss_pred --HHHHHHHhcCCCEEEEccccCC---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCc--------------
Q 029008 112 --SDSWKEALDGVTAVISCVGGFG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGV-------------- 171 (200)
Q Consensus 112 --~~~~~~~~~~~d~vi~~ag~~~---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~-------------- 171 (200)
.+.+.++..++|+|||||+... +.......|+.|+.+++++|.+.++++|+|+||. .|+.
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence 4667778889999999999754 2233446899999999999998888999999993 3431
Q ss_pred ----CC---------cCCcchhhhHHhhHHHHHhh
Q 029008 172 ----AN---------YLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 172 ----~~---------~~~~~Y~~sK~~~E~~~~~~ 193 (200)
+. .+.++|+.||+.+|.++..+
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~ 1164 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREA 1164 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHH
Confidence 00 12357999999999999875
No 269
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=4.8e-15 Score=120.33 Aligned_cols=142 Identities=18% Similarity=0.093 Sum_probs=106.5
Q ss_pred CCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc-------ccCCCCeeEEEccCCCHHHHHHHhc----
Q 029008 52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR-------DSWANNVIWHQGNLLSSDSWKEALD---- 120 (200)
Q Consensus 52 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~---- 120 (200)
....+++++|||++++||.+++++|+.+|.+|+...|+.+...+ ......+.++++|+++.+++.+..+
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 33456899999999999999999999999999999999743211 1224578899999999999887654
Q ss_pred ---CCCEEEEccccCC--------CCcccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcC------C------
Q 029008 121 ---GVTAVISCVGGFG--------SNSYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVA------N------ 173 (200)
Q Consensus 121 ---~~d~vi~~ag~~~--------~~~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~------~------ 173 (200)
..|++|+|||.+. ..+..+.+|+.|.+.+.+.+ +.....|||++||..++.. +
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~ 190 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKL 190 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccC
Confidence 4799999999754 23567899999998776665 4444479999999543110 0
Q ss_pred c-CCcchhhhHHhhHHHHHhh
Q 029008 174 Y-LLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 174 ~-~~~~Y~~sK~~~E~~~~~~ 193 (200)
. ....|+.||.+...+..+.
T Consensus 191 ~~~~~~Y~~SKla~~l~~~eL 211 (314)
T KOG1208|consen 191 YSSDAAYALSKLANVLLANEL 211 (314)
T ss_pred ccchhHHHHhHHHHHHHHHHH
Confidence 1 1124999999887766653
No 270
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.63 E-value=3.6e-15 Score=117.48 Aligned_cols=138 Identities=17% Similarity=0.128 Sum_probs=104.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCc----ccccCC----CCeeEEEccCCC-HHHHHHHhc----
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LRDSWA----NNVIWHQGNLLS-SDSWKEALD---- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~----~~~~~~~~Dl~d-~~~~~~~~~---- 120 (200)
..+++++||||+++||.++++.|+++|++|+++.|+.+.. ...... ..+.+..+|+++ .+.++.+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999988888875531 111112 367788899998 887776654
Q ss_pred ---CCCEEEEccccCC-----------CCcccchhhHHHHHHHHHHHHHcC-CCEEEEEeccccCcCCcC-CcchhhhHH
Q 029008 121 ---GVTAVISCVGGFG-----------SNSYMYKINGTANINAIRAASEKG-VKRFVYISAADFGVANYL-LQGYYEGKD 184 (200)
Q Consensus 121 ---~~d~vi~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~~~~-~~~~v~vSS~~~~~~~~~-~~~Y~~sK~ 184 (200)
++|++|||||... .++..+++|+.+...+.+++.... .++||++||.... ...+ ...|+.||+
T Consensus 83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~~~~Y~~sK~ 161 (251)
T COG1028 83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPGQAAYAASKA 161 (251)
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCCcchHHHHHH
Confidence 4899999999642 235678999999988887443221 1189999996544 4445 489999999
Q ss_pred hhHHHHHh
Q 029008 185 SNLSPLLA 192 (200)
Q Consensus 185 ~~E~~~~~ 192 (200)
+++.+.+.
T Consensus 162 al~~~~~~ 169 (251)
T COG1028 162 ALIGLTKA 169 (251)
T ss_pred HHHHHHHH
Confidence 99988775
No 271
>PLN00015 protochlorophyllide reductase
Probab=99.62 E-value=4e-15 Score=121.11 Aligned_cols=108 Identities=14% Similarity=0.122 Sum_probs=83.1
Q ss_pred EEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCccc---c--cCCCCeeEEEccCCCHHHHHHHhc-------CCCEEE
Q 029008 60 LVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLR---D--SWANNVIWHQGNLLSSDSWKEALD-------GVTAVI 126 (200)
Q Consensus 60 lVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~---~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi 126 (200)
+||||+++||.+++++|+++| ++|++.+|+.+...+ . ....++.++.+|++|.++++++++ .+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 599999999999999999999 999999987543211 1 112467889999999998887664 479999
Q ss_pred EccccCC-----------CCcccchhhHHHHHHHHHHHH----HcC--CCEEEEEecc
Q 029008 127 SCVGGFG-----------SNSYMYKINGTANINAIRAAS----EKG--VKRFVYISAA 167 (200)
Q Consensus 127 ~~ag~~~-----------~~~~~~~~n~~~~~~~~~~a~----~~~--~~~~v~vSS~ 167 (200)
||||... .++..+++|+.+++.+.+.+. +.+ .++||++||.
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~ 138 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSI 138 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecc
Confidence 9999632 123568999999988866653 333 4699999995
No 272
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.62 E-value=9.1e-15 Score=116.37 Aligned_cols=131 Identities=28% Similarity=0.308 Sum_probs=106.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS 136 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~ 136 (200)
++|+||||||++|++++++|+++|++|+++.|+.+...... .++++..+|+.+++.+...++++|.++++.+... +.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~ 77 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS 77 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence 47999999999999999999999999999999987754333 7899999999999999999999999999988655 33
Q ss_pred c-cchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 137 Y-MYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 137 ~-~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
. ..........+..+.+. .+.++++++|.. +........|..+|...|+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~--~~~~~~~~~~~~~~~~~e~~l~~s 132 (275)
T COG0702 78 DAFRAVQVTAVVRAAEAAG-AGVKHGVSLSVL--GADAASPSALARAKAAVEAALRSS 132 (275)
T ss_pred cchhHHHHHHHHHHHHHhc-CCceEEEEeccC--CCCCCCccHHHHHHHHHHHHHHhc
Confidence 3 44455555555555544 457788888875 444456789999999999999986
No 273
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.60 E-value=4.9e-15 Score=115.77 Aligned_cols=138 Identities=17% Similarity=0.205 Sum_probs=109.0
Q ss_pred CeEEEEccCchhHHHHHHHHHHC--CCcEEEeecC-----CCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDR--GLTVASLSRS-----GRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVIS 127 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~--g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~ 127 (200)
++++||||.||||++.+..+... .++.+.++.- .....+..+..+.+++.+|+.+...+.-++. .+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 89999999999999999999876 3555555432 1111223345689999999999988888775 5899999
Q ss_pred ccccCC------CCcccchhhHHHHHHHHHHHHHc-CCCEEEEEec-cccCcC-----------CcCCcchhhhHHhhHH
Q 029008 128 CVGGFG------SNSYMYKINGTANINAIRAASEK-GVKRFVYISA-ADFGVA-----------NYLLQGYYEGKDSNLS 188 (200)
Q Consensus 128 ~ag~~~------~~~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS-~~~~~~-----------~~~~~~Y~~sK~~~E~ 188 (200)
.|+... ++-.....|+.++..++++++.. ++++||++|| .+||.. ..|.++|+++|+++|.
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~ 166 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM 166 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence 998533 34456688999999999999888 5889999999 567753 2567899999999999
Q ss_pred HHHhhc
Q 029008 189 PLLACY 194 (200)
Q Consensus 189 ~~~~~~ 194 (200)
+++++-
T Consensus 167 ~v~Sy~ 172 (331)
T KOG0747|consen 167 LVRSYG 172 (331)
T ss_pred HHHHHh
Confidence 999973
No 274
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.60 E-value=1.6e-14 Score=105.77 Aligned_cols=143 Identities=18% Similarity=0.215 Sum_probs=117.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
.+++..+|.||||-.|..+.+++++++- +|+++.|++... ......+.....|....+++...+.+.|+.|.|.|.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d--~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgT 93 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD--PATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGT 93 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC--ccccceeeeEEechHHHHHHHhhhcCCceEEEeecc
Confidence 3578999999999999999999999984 999999985221 122346777778888888888889999999999986
Q ss_pred CC---CCcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh-ccCcccC
Q 029008 132 FG---SNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC-YSLCCLM 200 (200)
Q Consensus 132 ~~---~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~-~~~~~~~ 200 (200)
.. ..+.+++++....+.++++|++.|+++|+++||. |......-.|...|..+|.-+.+. |..++||
T Consensus 94 TRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~--GAd~sSrFlY~k~KGEvE~~v~eL~F~~~~i~ 164 (238)
T KOG4039|consen 94 TRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSA--GADPSSRFLYMKMKGEVERDVIELDFKHIIIL 164 (238)
T ss_pred cccccccCceEeechHHHHHHHHHHHhCCCeEEEEEecc--CCCcccceeeeeccchhhhhhhhccccEEEEe
Confidence 54 3577899999999999999999999999999997 566666778999999999987764 6655543
No 275
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.59 E-value=3.1e-14 Score=117.89 Aligned_cols=147 Identities=20% Similarity=0.195 Sum_probs=104.4
Q ss_pred CCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccC----CCCeeEEEccCCCHHHH-HHHhcC----C
Q 029008 52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSW-KEALDG----V 122 (200)
Q Consensus 52 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~d~~~~-~~~~~~----~ 122 (200)
......+|+|+||||.+|+.+++.|+++|+.|.++.|+.+....... ......+..|...+.++ ..+... .
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence 33456799999999999999999999999999999999766432211 23444555555443333 333332 3
Q ss_pred CEEEEccccCCCC---cccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchh------hhHHhhHHHHHhh
Q 029008 123 TAVISCVGGFGSN---SYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYY------EGKDSNLSPLLAC 193 (200)
Q Consensus 123 d~vi~~ag~~~~~---~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~------~sK~~~E~~~~~~ 193 (200)
.+++-|+|..... ...+.+.+.|+.+++++|+.+|++||+++|+......+.+...+. .+|..+|+++++.
T Consensus 155 ~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~S 234 (411)
T KOG1203|consen 155 VIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDS 234 (411)
T ss_pred eeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhc
Confidence 5677777654433 355679999999999999999999999999965444444444444 8899999999986
Q ss_pred -ccCcc
Q 029008 194 -YSLCC 198 (200)
Q Consensus 194 -~~~~~ 198 (200)
+++++
T Consensus 235 gl~yti 240 (411)
T KOG1203|consen 235 GLPYTI 240 (411)
T ss_pred CCCcEE
Confidence 44443
No 276
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=4.3e-15 Score=108.58 Aligned_cols=139 Identities=16% Similarity=0.083 Sum_probs=111.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhcC---CCEEEEc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDG---VTAVISC 128 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~vi~~ 128 (200)
..++.|++||+.-+||+.+++.|.+.|.+|+++.|++..... ...+.-++.+.+|+.+-+.+.+++.. +|.++||
T Consensus 5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence 468899999999999999999999999999999998765322 22234588999999998888887764 6999999
Q ss_pred cccC----------CCCcccchhhHHHHHHHHHHHH----HcC-CCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 129 VGGF----------GSNSYMYKINGTANINAIRAAS----EKG-VKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 129 ag~~----------~~~~~~~~~n~~~~~~~~~~a~----~~~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
||.. ...+..|++|+.+.+++.+... ..+ .+.||++||...-.+-..++.|+++|++.+.+.+.
T Consensus 85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~ 163 (245)
T KOG1207|consen 85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKC 163 (245)
T ss_pred chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHH
Confidence 9952 2457789999999998888743 223 34799999965566777889999999999987664
No 277
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.57 E-value=1.9e-14 Score=115.56 Aligned_cols=127 Identities=20% Similarity=0.163 Sum_probs=86.4
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCC---C
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS---N 135 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~---~ 135 (200)
|+||||+||||.++++.|+++|++|++++|+........ ... ..|+.+ +.+...+.++|+|||+||.... +
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~ 74 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-WEG----YKPWAP-LAESEALEGADAVINLAGEPIADKRW 74 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-cee----eecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence 689999999999999999999999999999876532111 111 112222 4455677899999999986321 2
Q ss_pred -----cccchhhHHHHHHHHHHHHHcCCC--EEEEEecc-ccCcCC----------cCCcchhhhHHhhHHHHH
Q 029008 136 -----SYMYKINGTANINAIRAASEKGVK--RFVYISAA-DFGVAN----------YLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 136 -----~~~~~~n~~~~~~~~~~a~~~~~~--~~v~vSS~-~~~~~~----------~~~~~Y~~sK~~~E~~~~ 191 (200)
...+++|+.++.+++++|++++++ .||+.|+. .|+... .+...|+..+...|..+.
T Consensus 75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~ 148 (292)
T TIGR01777 75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQ 148 (292)
T ss_pred CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhh
Confidence 346788999999999999999874 45555553 455321 112234555656666554
No 278
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.56 E-value=3.6e-14 Score=107.75 Aligned_cols=138 Identities=18% Similarity=0.142 Sum_probs=101.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHC-CCcEEEeecC-CCCccc--c---cCCCCeeEEEccCCCHHHHHHHhc--------
Q 029008 56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLSRS-GRSSLR--D---SWANNVIWHQGNLLSSDSWKEALD-------- 120 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~-~~~~~~--~---~~~~~~~~~~~Dl~d~~~~~~~~~-------- 120 (200)
++.++||||+.+||..|+++|++. |.++++..++ ++...+ . ....++++++.|+++.+++..+.+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 356999999999999999999976 6666655554 444221 1 125699999999999888877654
Q ss_pred -CCCEEEEccccCCC-----------CcccchhhHHHHHHHHHHH----HHcCCC-----------EEEEEeccc---cC
Q 029008 121 -GVTAVISCVGGFGS-----------NSYMYKINGTANINAIRAA----SEKGVK-----------RFVYISAAD---FG 170 (200)
Q Consensus 121 -~~d~vi~~ag~~~~-----------~~~~~~~n~~~~~~~~~~a----~~~~~~-----------~~v~vSS~~---~~ 170 (200)
++|++++|||.... +-..+++|..++..+.|++ ++...+ .||++||.. .+
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 57999999996431 2457899988888776665 222222 699999843 33
Q ss_pred cCCcCCcchhhhHHhhHHHHHhh
Q 029008 171 VANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 171 ~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
..+.+...|..||.+.-.+.++.
T Consensus 163 ~~~~~~~AYrmSKaAlN~f~ksl 185 (249)
T KOG1611|consen 163 FRPGGLSAYRMSKAALNMFAKSL 185 (249)
T ss_pred CCCcchhhhHhhHHHHHHHHHHh
Confidence 34567789999999999988874
No 279
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.54 E-value=6.6e-14 Score=113.47 Aligned_cols=140 Identities=8% Similarity=-0.055 Sum_probs=92.3
Q ss_pred CCCCeEEEEccC--chhHHHHHHHHHHCCCcEEEeecCC---------CCccc--c---cCCC-----CeeEEEccCCCH
Q 029008 54 PPSEKLLVLGGN--GFVGSHICREALDRGLTVASLSRSG---------RSSLR--D---SWAN-----NVIWHQGNLLSS 112 (200)
Q Consensus 54 ~~~~~ilVtGa~--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~--~---~~~~-----~~~~~~~Dl~d~ 112 (200)
.++|+++|||++ .+||+++++.|+++|++|++.++.+ +.... . .... ++..+.+|+.++
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 468999999995 8999999999999999999976531 00000 0 0000 111123343333
Q ss_pred H------------------HHHHHh-------cCCCEEEEccccCC------------CCcccchhhHHHHHHHHHHHHH
Q 029008 113 D------------------SWKEAL-------DGVTAVISCVGGFG------------SNSYMYKINGTANINAIRAASE 155 (200)
Q Consensus 113 ~------------------~~~~~~-------~~~d~vi~~ag~~~------------~~~~~~~~n~~~~~~~~~~a~~ 155 (200)
+ ++++++ .++|++|||||... +|+..+++|+.+.+++.+++..
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2 244433 35899999997421 2356789999999999888865
Q ss_pred c--CCCEEEEEeccccCcCCcCCc-chhhhHHhhHHHHHhh
Q 029008 156 K--GVKRFVYISAADFGVANYLLQ-GYYEGKDSNLSPLLAC 193 (200)
Q Consensus 156 ~--~~~~~v~vSS~~~~~~~~~~~-~Y~~sK~~~E~~~~~~ 193 (200)
. ..+++|++||.....+.+... .|+.+|++++.+.+..
T Consensus 166 ~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~l 206 (299)
T PRK06300 166 IMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVL 206 (299)
T ss_pred HhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHH
Confidence 3 124799998843223333333 7999999999988864
No 280
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.54 E-value=1.8e-13 Score=100.89 Aligned_cols=126 Identities=25% Similarity=0.308 Sum_probs=99.7
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCC-CC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG-SN 135 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~-~~ 135 (200)
|+|.|+||+|.+|++|++++.++||+|++++|++.+... ...+.+++.|+.|++.+.+.+.+.|+||..-|... +.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~---~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA---RQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc---cccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 589999999999999999999999999999999877433 25778999999999999999999999999887652 22
Q ss_pred cccchhhHHHHHHHHHHHHHcCCCEEEEEeccc----------cCcCCcCCcchhhhHHhhHH
Q 029008 136 SYMYKINGTANINAIRAASEKGVKRFVYISAAD----------FGVANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 136 ~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~----------~~~~~~~~~~Y~~sK~~~E~ 188 (200)
+.. .......+++..+..++.|++.++.++ .+.|..|...|...+..+|.
T Consensus 78 ~~~---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~ 137 (211)
T COG2910 78 DEL---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEF 137 (211)
T ss_pred hHH---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHH
Confidence 221 223345567777888999999999742 23455666778888888883
No 281
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.51 E-value=1.2e-13 Score=135.61 Aligned_cols=139 Identities=17% Similarity=0.121 Sum_probs=109.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHC-CCcEEEeecCCCCc---------------------------------------
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSS--------------------------------------- 93 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~--------------------------------------- 93 (200)
..+++++||||+++||..++++|+++ |++|++++|+....
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence 35789999999999999999999998 69999999982100
Q ss_pred -----c------c--ccCCCCeeEEEccCCCHHHHHHHhc------CCCEEEEccccCC----------CCcccchhhHH
Q 029008 94 -----L------R--DSWANNVIWHQGNLLSSDSWKEALD------GVTAVISCVGGFG----------SNSYMYKINGT 144 (200)
Q Consensus 94 -----~------~--~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vi~~ag~~~----------~~~~~~~~n~~ 144 (200)
. . .....++.++.+|++|.++++++++ ++|+||||||... .++..+++|+.
T Consensus 2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 0 0 0112467889999999999887775 4899999999642 34567999999
Q ss_pred HHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 145 ANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 145 ~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
|.+++++++.....++||++||...-........|+.+|.+++.+.+.
T Consensus 2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~ 2202 (2582)
T TIGR02813 2155 GLLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQ 2202 (2582)
T ss_pred HHHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999877778999999954323345567899999998887764
No 282
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.51 E-value=1.2e-13 Score=109.63 Aligned_cols=138 Identities=19% Similarity=0.109 Sum_probs=104.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc------cccCCCCeeEEEccCCCHHH----HHHHhcC--C
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL------RDSWANNVIWHQGNLLSSDS----WKEALDG--V 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~Dl~d~~~----~~~~~~~--~ 122 (200)
.+.=.+|||||.+||++.+++|+++|.+|++++|+.++.. +....-++.++..|+++++. +.+.+.+ +
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 3467899999999999999999999999999999977621 22234578899999987654 4444554 5
Q ss_pred CEEEEccccCCC-C-----------cccchhhHHHHHHHHHHH----HHcCCCEEEEEeccccCcCCcCCcchhhhHHhh
Q 029008 123 TAVISCVGGFGS-N-----------SYMYKINGTANINAIRAA----SEKGVKRFVYISAADFGVANYLLQGYYEGKDSN 186 (200)
Q Consensus 123 d~vi~~ag~~~~-~-----------~~~~~~n~~~~~~~~~~a----~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~ 186 (200)
.++|||+|...+ + ...+.+|+.++..+.+.. .+.+.+-||++||...-.+.+..+.|+++|..+
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v 207 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFV 207 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHH
Confidence 699999996541 1 345688888877665554 444556899999976667778889999999988
Q ss_pred HHHHHh
Q 029008 187 LSPLLA 192 (200)
Q Consensus 187 E~~~~~ 192 (200)
+.+-+.
T Consensus 208 ~~~S~~ 213 (312)
T KOG1014|consen 208 DFFSRC 213 (312)
T ss_pred HHHHHH
Confidence 876654
No 283
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.50 E-value=2.2e-13 Score=102.78 Aligned_cols=135 Identities=19% Similarity=0.183 Sum_probs=97.2
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCC-C-ccc------ccCCCCeeEEEccCCCHHHHHHHhcC-------
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR-S-SLR------DSWANNVIWHQGNLLSSDSWKEALDG------- 121 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~-~-~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 121 (200)
+++|||+.|+||..+++.|+++|. +|+++.|+.. . ... .....++.++.+|++|+++++++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999986 8888898832 2 111 11245789999999999999998863
Q ss_pred CCEEEEccccCCC----------CcccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHH
Q 029008 122 VTAVISCVGGFGS----------NSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 122 ~d~vi~~ag~~~~----------~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~ 191 (200)
++.|||++|...+ ....+..-+.+..++.++......+.||+.||...-........|.......+.+.+
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~ 161 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLDALAR 161 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHH
Confidence 5899999996432 123456668899999999888888999999995422334456889999999998877
Q ss_pred h
Q 029008 192 A 192 (200)
Q Consensus 192 ~ 192 (200)
.
T Consensus 162 ~ 162 (181)
T PF08659_consen 162 Q 162 (181)
T ss_dssp H
T ss_pred H
Confidence 5
No 284
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.49 E-value=1.9e-13 Score=108.50 Aligned_cols=136 Identities=19% Similarity=0.269 Sum_probs=105.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc-------CCCCeeEEEccCCCHHHHHHHhcC-------C
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-------WANNVIWHQGNLLSSDSWKEALDG-------V 122 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~-------~ 122 (200)
.+|+|||++.++|..++.++..+|++|+++.|+.++..+.. ....+.+..+|+.|.+++..++++ +
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 69999999999999999999999999999999876522211 112367899999999998888764 6
Q ss_pred CEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHc----C-CCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 123 TAVISCVGGFG----------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 123 d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~----~-~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
|.+|+|||..- ..+..+++|+.|+++++.++... . .++|+++||...-.+-...+.|..+|++..
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr 193 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR 193 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence 99999999531 12457899999999998887433 1 348999999543344456688999999888
Q ss_pred HHHHh
Q 029008 188 SPLLA 192 (200)
Q Consensus 188 ~~~~~ 192 (200)
.+...
T Consensus 194 gLa~~ 198 (331)
T KOG1210|consen 194 GLAEA 198 (331)
T ss_pred HHHHH
Confidence 77654
No 285
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=99.47 E-value=1.3e-13 Score=104.92 Aligned_cols=143 Identities=44% Similarity=0.666 Sum_probs=128.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCCCc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNS 136 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~ 136 (200)
...++.|+.|+.|.++++...+.|+.|..+.|+..+..+..+...+.++++|.....-+...+.++..++-++|.+....
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~ 132 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNII 132 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccchH
Confidence 36789999999999999999999999999999988777778888999999999877767788889999999999988888
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhhccCccc
Q 029008 137 YMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLACYSLCCL 199 (200)
Q Consensus 137 ~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 199 (200)
.+.++|-+...+.++++.++|+++|+|||...+|.++....+|..+|.++|..+.+.|++-++
T Consensus 133 ~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgi 195 (283)
T KOG4288|consen 133 LMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGI 195 (283)
T ss_pred HHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCce
Confidence 889999999999999999999999999999989888888889999999999988887665443
No 286
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.46 E-value=1e-13 Score=108.86 Aligned_cols=131 Identities=15% Similarity=0.056 Sum_probs=99.4
Q ss_pred ccC--chhHHHHHHHHHHCCCcEEEeecCCCCc---cc-ccCCCCeeEEEccCCCHHHHHHHh--------cCCCEEEEc
Q 029008 63 GGN--GFVGSHICREALDRGLTVASLSRSGRSS---LR-DSWANNVIWHQGNLLSSDSWKEAL--------DGVTAVISC 128 (200)
Q Consensus 63 Ga~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~-~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~d~vi~~ 128 (200)
|++ ++||.+++++|+++|++|++++|+.++. .+ .....+..++.+|++|++++++++ .++|++|||
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 666 9999999999999999999999987652 11 111123447999999999888774 358999999
Q ss_pred cccCCC--------------CcccchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHh
Q 029008 129 VGGFGS--------------NSYMYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 129 ag~~~~--------------~~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
+|.... +...+++|+.+.+.+++++.+. .-+++|++||.....+.+....|+.+|++++.+++.
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~ 160 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS 160 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence 985432 2345788999999888887443 125899999865455556667999999999999986
Q ss_pred h
Q 029008 193 C 193 (200)
Q Consensus 193 ~ 193 (200)
.
T Consensus 161 l 161 (241)
T PF13561_consen 161 L 161 (241)
T ss_dssp H
T ss_pred H
Confidence 4
No 287
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.46 E-value=3e-13 Score=106.32 Aligned_cols=115 Identities=15% Similarity=0.047 Sum_probs=90.7
Q ss_pred HHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc----CCCEEEEccccC--CCCcccchhhHHH
Q 029008 72 ICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISCVGGF--GSNSYMYKINGTA 145 (200)
Q Consensus 72 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~vi~~ag~~--~~~~~~~~~n~~~ 145 (200)
++++|+++|++|++++|+.+.. ...+++++|++|.++++++++ ++|+||||||.. ..++..+++|+.+
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~ 74 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGM------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLG 74 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchh------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHH
Confidence 4788999999999999986542 124678999999999998876 589999999964 3567789999999
Q ss_pred HHHHHHHHHHc--CCCEEEEEecc-ccC--------------------------cCCcCCcchhhhHHhhHHHHHh
Q 029008 146 NINAIRAASEK--GVKRFVYISAA-DFG--------------------------VANYLLQGYYEGKDSNLSPLLA 192 (200)
Q Consensus 146 ~~~~~~~a~~~--~~~~~v~vSS~-~~~--------------------------~~~~~~~~Y~~sK~~~E~~~~~ 192 (200)
+..+++++.+. ..++||++||. .++ .+.+....|+.+|++.+.+.+.
T Consensus 75 ~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (241)
T PRK12428 75 LRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150 (241)
T ss_pred HHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence 99999998654 23699999994 343 1334557899999999988764
No 288
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.37 E-value=9.7e-12 Score=104.73 Aligned_cols=141 Identities=18% Similarity=0.191 Sum_probs=107.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC---CcEEEeecCCCCccc-----------------cc---CCCCeeEEEccCC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLR-----------------DS---WANNVIWHQGNLL 110 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-----------------~~---~~~~~~~~~~Dl~ 110 (200)
..+|+|+|||||||+|+-+++.|+..- -+++++.|.+..... +. ...++..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 368999999999999999999999874 267888887644211 00 1257888999997
Q ss_pred CH------HHHHHHhcCCCEEEEccccCCCC---cccchhhHHHHHHHHHHHHHc-CCCEEEEEeccc------------
Q 029008 111 SS------DSWKEALDGVTAVISCVGGFGSN---SYMYKINGTANINAIRAASEK-GVKRFVYISAAD------------ 168 (200)
Q Consensus 111 d~------~~~~~~~~~~d~vi~~ag~~~~~---~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~~------------ 168 (200)
++ .+++.+.+++|+|||+|+..... +....+|..|+.++++.|++. ..+.++++|++.
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~ 169 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP 169 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence 64 55666778999999999976533 456789999999999999887 467899999962
Q ss_pred cCcC----------------------------CcCCcchhhhHHhhHHHHHhhc
Q 029008 169 FGVA----------------------------NYLLQGYYEGKDSNLSPLLACY 194 (200)
Q Consensus 169 ~~~~----------------------------~~~~~~Y~~sK~~~E~~~~~~~ 194 (200)
|..+ ...++.|.-+|+.+|+++.+..
T Consensus 170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~ 223 (467)
T KOG1221|consen 170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA 223 (467)
T ss_pred cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc
Confidence 1111 0235789999999999999863
No 289
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.28 E-value=2.4e-12 Score=94.26 Aligned_cols=134 Identities=16% Similarity=0.193 Sum_probs=99.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhc-------CCCE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALD-------GVTA 124 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 124 (200)
.++...+|||+.+++|++.++.|.++|..|.+++-..++-.+ .....++.|..+|++.+++++.++. +.|+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 355688999999999999999999999999999876554222 2335689999999999999988775 4799
Q ss_pred EEEccccCC----------------CCcccchhhHHHHHHHHHHHHH--------cCCC--EEEEEeccccCcCCcCCcc
Q 029008 125 VISCVGGFG----------------SNSYMYKINGTANINAIRAASE--------KGVK--RFVYISAADFGVANYLLQG 178 (200)
Q Consensus 125 vi~~ag~~~----------------~~~~~~~~n~~~~~~~~~~a~~--------~~~~--~~v~vSS~~~~~~~~~~~~ 178 (200)
.+||||... +....+++|+.|++|+++.... ++.. -+|+..|...-...-....
T Consensus 87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaa 166 (260)
T KOG1199|consen 87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAA 166 (260)
T ss_pred eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhh
Confidence 999999521 2345679999999999877531 1122 4666666432223345678
Q ss_pred hhhhHHhhH
Q 029008 179 YYEGKDSNL 187 (200)
Q Consensus 179 Y~~sK~~~E 187 (200)
|.+||.++-
T Consensus 167 ysaskgaiv 175 (260)
T KOG1199|consen 167 YSASKGAIV 175 (260)
T ss_pred hhcccCceE
Confidence 999998654
No 290
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.26 E-value=1.9e-11 Score=95.77 Aligned_cols=106 Identities=21% Similarity=0.279 Sum_probs=72.7
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc-CCCEEEEccccC--CC-
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVGGF--GS- 134 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi~~ag~~--~~- 134 (200)
|+||||||+||++|+..|.+.||+|++++|++....... ...+. ..+.+.+..+ ++|+|||.||.. +.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rr 72 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPNVT-------LWEGLADALTLGIDAVINLAGEPIAERR 72 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccccc-------ccchhhhcccCCCCEEEECCCCcccccc
Confidence 689999999999999999999999999999987643221 11222 2233445555 799999999952 22
Q ss_pred C-----cccchhhHHHHHHHHHHHHHc--CCCEEEEEecc-ccCcC
Q 029008 135 N-----SYMYKINGTANINAIRAASEK--GVKRFVYISAA-DFGVA 172 (200)
Q Consensus 135 ~-----~~~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~-~~~~~ 172 (200)
| +...+-.+..|..+.++..+. +++.+|.-|.. .||..
T Consensus 73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~ 118 (297)
T COG1090 73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS 118 (297)
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC
Confidence 3 234455577888888887644 45566665553 35543
No 291
>PRK06720 hypothetical protein; Provisional
Probab=99.24 E-value=1.6e-10 Score=86.16 Aligned_cols=79 Identities=11% Similarity=0.229 Sum_probs=62.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc---cc--cCCCCeeEEEccCCCHHHHHHHhc-------C
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---RD--SWANNVIWHQGNLLSSDSWKEALD-------G 121 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~--~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 121 (200)
.++++++||||+++||.++++.|++.|++|++++|+.+... +. .....+.++.+|++|.++++++++ +
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999998754311 11 113456788999999988887553 5
Q ss_pred CCEEEEccccC
Q 029008 122 VTAVISCVGGF 132 (200)
Q Consensus 122 ~d~vi~~ag~~ 132 (200)
+|++|||||..
T Consensus 94 iDilVnnAG~~ 104 (169)
T PRK06720 94 IDMLFQNAGLY 104 (169)
T ss_pred CCEEEECCCcC
Confidence 89999999953
No 292
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.22 E-value=9.6e-11 Score=90.47 Aligned_cols=133 Identities=19% Similarity=0.238 Sum_probs=103.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCc----cc-------ccCCCCeeEEEccCCCHHHHHHHhcC--
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS----LR-------DSWANNVIWHQGNLLSSDSWKEALDG-- 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 121 (200)
..|..||||-+|.-|++|++.|+..||+|.++.|+.+.- .+ .........+.+|++|...+.+++..
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 456899999999999999999999999999999886541 11 11234678899999999999998874
Q ss_pred CCEEEEccccC------CCCcccchhhHHHHHHHHHHHHHcCCC---EEEEEecc-ccCcC----------CcCCcchhh
Q 029008 122 VTAVISCVGGF------GSNSYMYKINGTANINAIRAASEKGVK---RFVYISAA-DFGVA----------NYLLQGYYE 181 (200)
Q Consensus 122 ~d~vi~~ag~~------~~~~~~~~~n~~~~~~~~~~a~~~~~~---~~v~vSS~-~~~~~----------~~~~~~Y~~ 181 (200)
++-|+|.|+.+ +-++..-++...|++.++++.+.++.. +|.-.|++ -||.. -.|.++|++
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~ 186 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA 186 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence 68999998854 345667789999999999999887643 77777774 36632 246789999
Q ss_pred hHHhhH
Q 029008 182 GKDSNL 187 (200)
Q Consensus 182 sK~~~E 187 (200)
+|..+-
T Consensus 187 aKmy~~ 192 (376)
T KOG1372|consen 187 AKMYGY 192 (376)
T ss_pred hhhhhe
Confidence 997653
No 293
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.8e-10 Score=86.44 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=75.0
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhcC-------CCEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDG-------VTAV 125 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~d~v 125 (200)
|+++||||+|++|. +++.|.++|++|++++|+++.... .....++.++.+|+.|++++.+++++ +|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 47999999977665 999999999999999987544211 11134688899999999999887763 5666
Q ss_pred EEccccCCCCcccchhhHHHHHHHHHHHHHcCCC----EEEEEecc
Q 029008 126 ISCVGGFGSNSYMYKINGTANINAIRAASEKGVK----RFVYISAA 167 (200)
Q Consensus 126 i~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~----~~v~vSS~ 167 (200)
|+. +++.++.++..+|++.|++ +|+++=.+
T Consensus 80 v~~------------vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs 113 (177)
T PRK08309 80 VAW------------IHSSAKDALSVVCRELDGSSETYRLFHVLGS 113 (177)
T ss_pred EEe------------ccccchhhHHHHHHHHccCCCCceEEEEeCC
Confidence 654 3445677899999999998 88888653
No 294
>PTZ00325 malate dehydrogenase; Provisional
Probab=99.12 E-value=9.1e-10 Score=89.88 Aligned_cols=115 Identities=17% Similarity=0.194 Sum_probs=86.5
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCc-ccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSS-LRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
..+|++|.|+|++|.+|..++..|..++ +++.++++..... ..........+...+.+|+.++.+.++++|+||+++
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 3578899999999999999999998665 5899999832211 001111111233446667666678899999999999
Q ss_pred ccCCC----CcccchhhHHHHHHHHHHHHHcCCCEEEEEecc
Q 029008 130 GGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISAA 167 (200)
Q Consensus 130 g~~~~----~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~ 167 (200)
|.... +...+..|+..+.++++++++++++++|+++|.
T Consensus 85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SN 126 (321)
T PTZ00325 85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSN 126 (321)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 97443 356788999999999999999999999999984
No 295
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.12 E-value=1.4e-10 Score=88.51 Aligned_cols=135 Identities=11% Similarity=0.058 Sum_probs=94.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeE--------EEccCCCHHHHHHHhc-----
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIW--------HQGNLLSSDSWKEALD----- 120 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--------~~~Dl~d~~~~~~~~~----- 120 (200)
.+++.++|||++.+||..++..+.+++.+.....+...... ..+..+ ..+|+++...+.++++
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k 79 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKK 79 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHhhhhhc
Confidence 35678999999999999999999999876554443322211 123333 3344444433333332
Q ss_pred --CCCEEEEccccCC-------------CCcccchhhHHHHHHHHHHHHHc----C-CCEEEEEeccccCcCCcCCcchh
Q 029008 121 --GVTAVISCVGGFG-------------SNSYMYKINGTANINAIRAASEK----G-VKRFVYISAADFGVANYLLQGYY 180 (200)
Q Consensus 121 --~~d~vi~~ag~~~-------------~~~~~~~~n~~~~~~~~~~a~~~----~-~~~~v~vSS~~~~~~~~~~~~Y~ 180 (200)
+.|.||||||... .|...|++|++....+.+.+.+. . .+-+|++||...-.|-..+..|+
T Consensus 80 ~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc 159 (253)
T KOG1204|consen 80 GGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYC 159 (253)
T ss_pred CCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhh
Confidence 3699999999532 45778999999998777766432 1 35799999965566777788999
Q ss_pred hhHHhhHHHHHh
Q 029008 181 EGKDSNLSPLLA 192 (200)
Q Consensus 181 ~sK~~~E~~~~~ 192 (200)
.+|++.+.+.+.
T Consensus 160 ~~KaAr~m~f~~ 171 (253)
T KOG1204|consen 160 SSKAARNMYFMV 171 (253)
T ss_pred hhHHHHHHHHHH
Confidence 999999998875
No 296
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.10 E-value=7.8e-10 Score=85.73 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=97.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCc-----EEEeecCCCCccc------ccC---CCCeeEEEccCCCHHHHHHHhc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLT-----VASLSRSGRSSLR------DSW---ANNVIWHQGNLLSSDSWKEALD 120 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~-----V~~~~r~~~~~~~------~~~---~~~~~~~~~Dl~d~~~~~~~~~ 120 (200)
+.|.++|||+++++|.+|+.+|++...+ +.+..|+-++..+ ... ..+++++..|+++..++..+.+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 4578999999999999999999988643 4555676554221 111 2368899999999877766543
Q ss_pred -------CCCEEEEccccCCCC-------------------------------------cccchhhHHHHHHHHHHHHHc
Q 029008 121 -------GVTAVISCVGGFGSN-------------------------------------SYMYKINGTANINAIRAASEK 156 (200)
Q Consensus 121 -------~~d~vi~~ag~~~~~-------------------------------------~~~~~~n~~~~~~~~~~a~~~ 156 (200)
..|.|+.|||.+..+ ...|+.||.|.+-++......
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 579999999954211 235799999999888776543
Q ss_pred ----CCCEEEEEeccccCcCC---------cCCcchhhhHHhhHHHHH
Q 029008 157 ----GVKRFVYISAADFGVAN---------YLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 157 ----~~~~~v~vSS~~~~~~~---------~~~~~Y~~sK~~~E~~~~ 191 (200)
...++|++||....... ....+|..||...+-+-.
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~ 209 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHV 209 (341)
T ss_pred hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHH
Confidence 22389999995433222 335689999998876433
No 297
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=5.8e-10 Score=85.11 Aligned_cols=123 Identities=27% Similarity=0.262 Sum_probs=91.1
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG 131 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~ 131 (200)
+++|+|||++|.+|++|.+.+.++|. +-.++.-+ -.+|+++.++.+++|+ +...|||.|+.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------kd~DLt~~a~t~~lF~~ekPthVIhlAAm 65 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------KDADLTNLADTRALFESEKPTHVIHLAAM 65 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------ccccccchHHHHHHHhccCCceeeehHhh
Confidence 47999999999999999999999875 22222211 1259999999999997 47899999874
Q ss_pred CC-------CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec-cccC---------------cCCcCCcchhhhHHhhHH
Q 029008 132 FG-------SNSYMYKINGTANINAIRAASEKGVKRFVYISA-ADFG---------------VANYLLQGYYEGKDSNLS 188 (200)
Q Consensus 132 ~~-------~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS-~~~~---------------~~~~~~~~Y~~sK~~~E~ 188 (200)
.. .+..+++.|+.-.-|++..|-++|++++++.-| ..|. .+.+...+|.-+|..+.-
T Consensus 66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv 145 (315)
T KOG1431|consen 66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV 145 (315)
T ss_pred hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence 32 345678999999999999999999998887766 4332 223344578888976665
Q ss_pred HHHhh
Q 029008 189 PLLAC 193 (200)
Q Consensus 189 ~~~~~ 193 (200)
.-+.+
T Consensus 146 ~n~aY 150 (315)
T KOG1431|consen 146 QNQAY 150 (315)
T ss_pred HHHHH
Confidence 44554
No 298
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=99.03 E-value=1.3e-09 Score=90.52 Aligned_cols=76 Identities=25% Similarity=0.240 Sum_probs=66.2
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccc--cCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD--SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
|++|+|.|+ |++|+.++..|+++| .+|++.+|+.+..... ....+++.++.|+.|.+.+.+++++.|+|||++.++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 579999999 999999999999999 8999999997653332 223489999999999999999999999999999864
No 299
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.94 E-value=5.1e-09 Score=80.52 Aligned_cols=133 Identities=13% Similarity=0.067 Sum_probs=95.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHC-CC-cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHh--cCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDR-GL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL--DGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi~~ag 130 (200)
..++|+|||+-|.+|..+++.|..+ |. .|++.+-.+... .....--++..|+.|...++++. +++|.+||..+
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~---~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSA 119 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA---NVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSA 119 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch---hhcccCCchhhhhhccccHHHhhcccccceeeeHHH
Confidence 4569999999999999999999877 65 455444332221 11245567888999999999876 36999999876
Q ss_pred cCC-----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc-ccCcCC-----------cCCcchhhhHHhhHHHHH
Q 029008 131 GFG-----SNSYMYKINGTANINAIRAASEKGVKRFVYISAA-DFGVAN-----------YLLQGYYEGKDSNLSPLL 191 (200)
Q Consensus 131 ~~~-----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~-~~~~~~-----------~~~~~Y~~sK~~~E~~~~ 191 (200)
..+ .-.-..++|++|.-|+++.|++++. +++.-|+. .+|... .|.+.||.||..+|.+-+
T Consensus 120 LLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 120 LLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE 196 (366)
T ss_pred HHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence 322 2234578999999999999999876 44445553 455321 345789999999986654
No 300
>PLN00106 malate dehydrogenase
Probab=98.93 E-value=1.1e-08 Score=83.57 Aligned_cols=111 Identities=20% Similarity=0.174 Sum_probs=83.0
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCcc-cccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
.++|.|+|++|.+|..++..|..++. ++.+++.+..... .............++.+.+++.+.++++|+||++||..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 46999999999999999999997764 7999988762210 01111111222335445556788999999999999964
Q ss_pred C----CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 133 G----SNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 133 ~----~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
. .+...+..|+....++++.+.+++.+.+|+++|
T Consensus 98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvS 135 (323)
T PLN00106 98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIIS 135 (323)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 3 345677899999999999999999999988888
No 301
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.92 E-value=1.2e-08 Score=83.72 Aligned_cols=110 Identities=11% Similarity=0.037 Sum_probs=75.6
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC-------CcEEEeecCCCCcccccC----CCCeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG-------LTVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
.+|+||||+|++|..++..|+.++ ++|++++++......... .+-......|+....++.+.++++|+|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 479999999999999999999854 589999986532111000 000002223554456777889999999
Q ss_pred EEccccCCC----CcccchhhHHHHHHHHHHHHHcC-CC-EEEEEec
Q 029008 126 ISCVGGFGS----NSYMYKINGTANINAIRAASEKG-VK-RFVYISA 166 (200)
Q Consensus 126 i~~ag~~~~----~~~~~~~n~~~~~~~~~~a~~~~-~~-~~v~vSS 166 (200)
||+||.... ....++.|+.-...+.+...++. .+ .+|.+|.
T Consensus 83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 999997542 24577889888888888887774 34 4555554
No 302
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.87 E-value=5.6e-08 Score=80.65 Aligned_cols=78 Identities=14% Similarity=0.125 Sum_probs=59.7
Q ss_pred CCCCeEEEEccCchhHHH--HHHHHHHCCCcEEEeecCCCCcc--------------c---ccCCCCeeEEEccCCCHHH
Q 029008 54 PPSEKLLVLGGNGFVGSH--ICREALDRGLTVASLSRSGRSSL--------------R---DSWANNVIWHQGNLLSSDS 114 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~--l~~~L~~~g~~V~~~~r~~~~~~--------------~---~~~~~~~~~~~~Dl~d~~~ 114 (200)
..+|++||||+++++|.+ +++.| ..|++|+++++..+... . ......+..+.+|+++++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 457899999999999999 89999 99999988885431100 0 1112346788999999988
Q ss_pred HHHHhc-------CCCEEEEccccC
Q 029008 115 WKEALD-------GVTAVISCVGGF 132 (200)
Q Consensus 115 ~~~~~~-------~~d~vi~~ag~~ 132 (200)
++++++ ++|++|||+|..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 887765 589999999854
No 303
>PRK09620 hypothetical protein; Provisional
Probab=98.82 E-value=2e-08 Score=78.32 Aligned_cols=78 Identities=24% Similarity=0.279 Sum_probs=54.8
Q ss_pred CCCeEEEEccC----------------chhHHHHHHHHHHCCCcEEEeecCCCCcccc-cCCCCeeEEEccCCCHHHHHH
Q 029008 55 PSEKLLVLGGN----------------GFVGSHICREALDRGLTVASLSRSGRSSLRD-SWANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 55 ~~~~ilVtGa~----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~ 117 (200)
.+++|+||+|. |++|.+|+++|+++|++|+++++........ .....+..+..|....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 46889999876 9999999999999999999988643221111 001233445553333466777
Q ss_pred Hhc--CCCEEEEccccC
Q 029008 118 ALD--GVTAVISCVGGF 132 (200)
Q Consensus 118 ~~~--~~d~vi~~ag~~ 132 (200)
++. ++|+|||+|+..
T Consensus 82 ~~~~~~~D~VIH~AAvs 98 (229)
T PRK09620 82 IITHEKVDAVIMAAAGS 98 (229)
T ss_pred HhcccCCCEEEECcccc
Confidence 784 689999999964
No 304
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.80 E-value=2.1e-08 Score=84.23 Aligned_cols=73 Identities=36% Similarity=0.470 Sum_probs=58.4
Q ss_pred EEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCccccc---CCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 59 LLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDS---WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
|+|.|+ |++|+.+++.|++++. +|++.+|+.++..... ...++.++++|+.|.+++.++++++|+||||+|++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 789999 9999999999999974 8999999976632211 45689999999999999999999999999999975
No 305
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.74 E-value=5.5e-08 Score=76.00 Aligned_cols=74 Identities=11% Similarity=0.037 Sum_probs=52.4
Q ss_pred eEEEE-ccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCC--HHHHHHHhcCCCEEEEccccCC
Q 029008 58 KLLVL-GGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS--SDSWKEALDGVTAVISCVGGFG 133 (200)
Q Consensus 58 ~ilVt-Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~vi~~ag~~~ 133 (200)
.-.|| .++|++|.+|+++|+++|++|+++.|...... ....++.++.++..+ .+.+.+.+.++|+||||||..+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 33566 47799999999999999999999987643211 112466776654322 2455566778999999999754
No 306
>PRK05086 malate dehydrogenase; Provisional
Probab=98.71 E-value=2.3e-07 Score=75.73 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=76.7
Q ss_pred CeEEEEccCchhHHHHHHHHHH-C--CCcEEEeecCCCCccc--ccCC-CCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 57 EKLLVLGGNGFVGSHICREALD-R--GLTVASLSRSGRSSLR--DSWA-NNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~--~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
|+|+|+||+|.+|.+++..|.. . ++++.++++++..... .... .....+.+ .+.+++.+.++++|+||.++|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 5899999999999999998855 2 4578888876432111 0111 11122222 223455677789999999999
Q ss_pred cCCCC----cccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 131 GFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 131 ~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
....+ ...+..|......+++++.+.+.+++|.+.|
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 75433 4567889999999999999999999888887
No 307
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.65 E-value=6.3e-07 Score=68.80 Aligned_cols=138 Identities=9% Similarity=0.017 Sum_probs=90.6
Q ss_pred CCCCeEEEEcc--CchhHHHHHHHHHHCCCcEEEeecCCCCcc--ccc--CCCCeeEEEccCCCHHHHHHHhc-------
Q 029008 54 PPSEKLLVLGG--NGFVGSHICREALDRGLTVASLSRSGRSSL--RDS--WANNVIWHQGNLLSSDSWKEALD------- 120 (200)
Q Consensus 54 ~~~~~ilVtGa--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~--~~~~~~~~~~Dl~d~~~~~~~~~------- 120 (200)
..+|+++|+|- ...|+..|++.|.++|+++......+.-.. ++. ......+++||+++.++++++|+
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g 83 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG 83 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence 47899999994 378999999999999999988876652111 111 11235679999999999998886
Q ss_pred CCCEEEEccccCCCC---cc-----------cchhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHH
Q 029008 121 GVTAVISCVGGFGSN---SY-----------MYKINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKD 184 (200)
Q Consensus 121 ~~d~vi~~ag~~~~~---~~-----------~~~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~ 184 (200)
.+|.+||+.|..... .. .+++-......++++++.. ....+|-++=...-..-+..+..+..|+
T Consensus 84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvAKA 163 (259)
T COG0623 84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAKA 163 (259)
T ss_pred cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHHHH
Confidence 479999999864311 11 1233333334455555443 2335665553211223355568899999
Q ss_pred hhHHHHH
Q 029008 185 SNLSPLL 191 (200)
Q Consensus 185 ~~E~~~~ 191 (200)
+.|.-+|
T Consensus 164 aLEasvR 170 (259)
T COG0623 164 ALEASVR 170 (259)
T ss_pred HHHHHHH
Confidence 9998766
No 308
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.56 E-value=3.3e-07 Score=77.11 Aligned_cols=73 Identities=18% Similarity=0.200 Sum_probs=57.8
Q ss_pred CCCCeEEEEcc----------------CchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHH
Q 029008 54 PPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 54 ~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 117 (200)
..+++++|||| +|.+|.+++++|..+|++|++++++.... .+.+ +...|+++.+++.+
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~----~~~~--~~~~dv~~~~~~~~ 259 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP----TPAG--VKRIDVESAQEMLD 259 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc----CCCC--cEEEccCCHHHHHH
Confidence 57899999999 88899999999999999999998865321 1122 34569999877776
Q ss_pred Hh----cCCCEEEEccccC
Q 029008 118 AL----DGVTAVISCVGGF 132 (200)
Q Consensus 118 ~~----~~~d~vi~~ag~~ 132 (200)
.+ ..+|++|||||..
T Consensus 260 ~v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 260 AVLAALPQADIFIMAAAVA 278 (399)
T ss_pred HHHHhcCCCCEEEEccccc
Confidence 65 3689999999964
No 309
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.55 E-value=1.9e-07 Score=71.09 Aligned_cols=78 Identities=17% Similarity=0.126 Sum_probs=60.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccc---c-CCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRD---S-WANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
..+++++|+||+|++|+.+++.|++.|++|+++.|+.++.... . ...+..+..+|+.+.+++.+.++++|+||++.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 4568999999999999999999999999999999875432110 0 01234566678889999999999999999976
Q ss_pred cc
Q 029008 130 GG 131 (200)
Q Consensus 130 g~ 131 (200)
..
T Consensus 106 ~~ 107 (194)
T cd01078 106 AA 107 (194)
T ss_pred CC
Confidence 53
No 310
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.52 E-value=1.3e-06 Score=69.20 Aligned_cols=74 Identities=12% Similarity=0.232 Sum_probs=56.9
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF 132 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~ 132 (200)
|+|+|+||||. |+.+++.|.++|++|++..+......... ..+...+..+..|.+++.+.+. ++|+||+.+.++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf 76 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGALDPQELREFLKRHSIDILVDATHPF 76 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH
Confidence 58999999999 99999999999999999999876532211 2223344456678888888886 489999998753
No 311
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.52 E-value=2.4e-07 Score=75.22 Aligned_cols=76 Identities=21% Similarity=0.423 Sum_probs=62.0
Q ss_pred eEEEEccCchhHHHHHHHHHH----CCCcEEEeecCCCCccc------ccC---CCCeeEEEccCCCHHHHHHHhcCCCE
Q 029008 58 KLLVLGGNGFVGSHICREALD----RGLTVASLSRSGRSSLR------DSW---ANNVIWHQGNLLSSDSWKEALDGVTA 124 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~------~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~ 124 (200)
.++|.||+||.|.++++++.+ .|...-+..|++.+..+ ... .....++.+|..|++++.+..+++.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 689999999999999999999 67888888998765221 111 12333889999999999999999999
Q ss_pred EEEccccCC
Q 029008 125 VISCVGGFG 133 (200)
Q Consensus 125 vi~~ag~~~ 133 (200)
|+||+|+..
T Consensus 87 ivN~vGPyR 95 (423)
T KOG2733|consen 87 IVNCVGPYR 95 (423)
T ss_pred EEeccccce
Confidence 999999753
No 312
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.44 E-value=2.9e-06 Score=69.61 Aligned_cols=101 Identities=13% Similarity=0.036 Sum_probs=71.0
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC-------cEEEeecCCCCcccccCCCCeeEEEccCCCH-----------HHHHHHh
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLRDSWANNVIWHQGNLLSS-----------DSWKEAL 119 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~-----------~~~~~~~ 119 (200)
+|.|+||+|.+|..++..|..+|. ++++++++... +..+....|+.|. ....+.+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~ 74 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------KALEGVVMELQDCAFPLLKGVVITTDPEEAF 74 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------CccceeeeehhhhcccccCCcEEecChHHHh
Confidence 789999999999999999998763 48888887521 1112223333333 3456788
Q ss_pred cCCCEEEEccccCCCC----cccchhhHHHHHHHHHHHHHcC-CCE-EEEEe
Q 029008 120 DGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VKR-FVYIS 165 (200)
Q Consensus 120 ~~~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~-~~~-~v~vS 165 (200)
+++|+||++||....+ ...+..|+.-...+.+...+.+ .+- +|.+|
T Consensus 75 ~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 75 KDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred CCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 8999999999975432 3467788888888888888884 554 44444
No 313
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.43 E-value=2.6e-06 Score=69.94 Aligned_cols=102 Identities=12% Similarity=0.033 Sum_probs=71.8
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC-------cEEEeecCCCCcccccCCCCeeEEEccCCCHH-----------HHHHHh
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSLRDSWANNVIWHQGNLLSSD-----------SWKEAL 119 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~-----------~~~~~~ 119 (200)
+|.|+|++|.+|..++..|..+|. +++++++++.... .+....|+.|.. +..+.+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-------a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~ 73 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-------LEGVVMELMDCAFPLLDGVVPTHDPAVAF 73 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-------cceeEeehhcccchhcCceeccCChHHHh
Confidence 589999999999999999998653 4888888654321 122233443332 345788
Q ss_pred cCCCEEEEccccCC----CCcccchhhHHHHHHHHHHHHHcC-CC-EEEEEec
Q 029008 120 DGVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKG-VK-RFVYISA 166 (200)
Q Consensus 120 ~~~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~~a~~~~-~~-~~v~vSS 166 (200)
+++|+||++||... ++...+..|+.-...+.+...+.+ .+ .+|.+|.
T Consensus 74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 89999999999743 245567888888888898888874 54 4444443
No 314
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.39 E-value=3e-06 Score=66.05 Aligned_cols=74 Identities=24% Similarity=0.354 Sum_probs=62.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccC-CCCeeEEEccCCCHHHHHHH-hcCCCEEEEcccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVGG 131 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~ag~ 131 (200)
|+++|.|+ |-+|..+++.|.++|++|++++++++...+... .....++.+|-+|++.++++ +.++|+++-..|.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 57899997 999999999999999999999998776433222 35789999999999999988 7889999987654
No 315
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.36 E-value=1e-06 Score=68.81 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=47.8
Q ss_pred EEEc-cCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHh-------cCCCEEEEcccc
Q 029008 60 LVLG-GNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-------DGVTAVISCVGG 131 (200)
Q Consensus 60 lVtG-a~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~d~vi~~ag~ 131 (200)
.||. ++|++|.+++++|+++|++|+++++..... .. ....+|+.+.+++++++ .++|++|||||.
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~-----~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv 90 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRALK-----PE--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV 90 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcc-----cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence 5555 589999999999999999999987632111 00 12346888877776554 358999999996
Q ss_pred C
Q 029008 132 F 132 (200)
Q Consensus 132 ~ 132 (200)
.
T Consensus 91 ~ 91 (227)
T TIGR02114 91 S 91 (227)
T ss_pred c
Confidence 4
No 316
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.35 E-value=2.8e-06 Score=71.29 Aligned_cols=105 Identities=15% Similarity=0.167 Sum_probs=70.5
Q ss_pred CCCCeEEEEcc----------------CchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHH-H
Q 029008 54 PPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSW-K 116 (200)
Q Consensus 54 ~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~-~ 116 (200)
..+++++|||| +|.+|.+++++|..+|++|+++.+...... +..+ ...|+.+.+++ +
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~----~~~~--~~~~v~~~~~~~~ 256 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT----PPGV--KSIKVSTAEEMLE 256 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC----CCCc--EEEEeccHHHHHH
Confidence 57899999998 356999999999999999999887654321 1223 45688888777 5
Q ss_pred HHh----cCCCEEEEccccCCCC------------cccchhhHHHHHHHHHHHHHcCCCEEEEEe
Q 029008 117 EAL----DGVTAVISCVGGFGSN------------SYMYKINGTANINAIRAASEKGVKRFVYIS 165 (200)
Q Consensus 117 ~~~----~~~d~vi~~ag~~~~~------------~~~~~~n~~~~~~~~~~a~~~~~~~~v~vS 165 (200)
+++ .++|++|+|||..+.. ...+.+|+..+..+++..++...+ .+.++
T Consensus 257 ~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~-~~lvg 320 (390)
T TIGR00521 257 AALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKH-QVIVG 320 (390)
T ss_pred HHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCC-cEEEE
Confidence 444 3689999999964310 112345556666666666544322 34444
No 317
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.32 E-value=1.7e-06 Score=70.04 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=58.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCc-EEEeecCCC---Cccc---cc--CCCCeeEEEccCCCHHHHHHHhcCCCE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGR---SSLR---DS--WANNVIWHQGNLLSSDSWKEALDGVTA 124 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~---~~~~---~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 124 (200)
..+++++|+|+ |++|++++..|++.|++ |+++.|+.+ +..+ .. ....+.+..+|+.+.+++.+.++.+|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 45689999999 89999999999999986 999999852 2111 01 112345667889888888888888999
Q ss_pred EEEccc
Q 029008 125 VISCVG 130 (200)
Q Consensus 125 vi~~ag 130 (200)
||||..
T Consensus 203 lINaTp 208 (289)
T PRK12548 203 LVNATL 208 (289)
T ss_pred EEEeCC
Confidence 999864
No 318
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.19 E-value=2.7e-06 Score=69.98 Aligned_cols=74 Identities=20% Similarity=0.209 Sum_probs=52.9
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHC-C-CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDR-G-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
...+++|+||||+|++|+.++++|+++ | .+++++.|+..+..... . ++..+|+ .++.+.+.++|+|||+++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La--~--el~~~~i---~~l~~~l~~aDiVv~~ts 224 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ--A--ELGGGKI---LSLEEALPEADIVVWVAS 224 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH--H--HhccccH---HhHHHHHccCCEEEECCc
Confidence 356789999999999999999999865 5 58888888754421111 0 1112333 346688889999999998
Q ss_pred cCC
Q 029008 131 GFG 133 (200)
Q Consensus 131 ~~~ 133 (200)
...
T Consensus 225 ~~~ 227 (340)
T PRK14982 225 MPK 227 (340)
T ss_pred CCc
Confidence 643
No 319
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=98.15 E-value=3.2e-05 Score=63.89 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=47.3
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCc---EEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLT---VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+++|+|.||+|++|+.+++.|.++||. +..+.+.......... .+......|+.+. .++++|+||.++|.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~-~g~~i~v~d~~~~-----~~~~vDvVf~A~g~ 73 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSF-KGKELKVEDLTTF-----DFSGVDIALFSAGG 73 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeee-CCceeEEeeCCHH-----HHcCCCEEEECCCh
Confidence 468999999999999999999998874 4667665433222111 2233444455422 34689999998875
No 320
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=98.13 E-value=4.2e-06 Score=67.58 Aligned_cols=76 Identities=20% Similarity=0.306 Sum_probs=58.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG 133 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~ 133 (200)
...++|-||+||.|..++++|+.+|.+-.+..|+..+... .....++..+ ++.+++.+++...+.++|+||+|++.
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~--p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVF--PLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcccccc--CCCCHHHHHHHHhcceEEEecccccc
Confidence 4578999999999999999999999988888888655221 1112333333 44459999999999999999999864
No 321
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.09 E-value=1.9e-05 Score=59.60 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=41.0
Q ss_pred ccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHH----HHhcCCCEEEEccccCC
Q 029008 63 GGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK----EALDGVTAVISCVGGFG 133 (200)
Q Consensus 63 Ga~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~----~~~~~~d~vi~~ag~~~ 133 (200)
-.+|..|.+|++++..+|++|+++.....-. .+..+..+..+ ..+++. +.+...|++|++|++.+
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~----~p~~~~~i~v~--sa~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGPSSLP----PPPGVKVIRVE--SAEEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE-S--SHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecCcccc----ccccceEEEec--chhhhhhhhccccCcceeEEEecchhh
Confidence 4679999999999999999999998874221 13577777644 444333 44557899999999754
No 322
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.08 E-value=2.1e-05 Score=56.87 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=71.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCccc---------ccCCCCeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
++|.|+|++|.+|.+++..|..++ .++++++++++.... ........+...| .+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence 589999999999999999999987 479999988543110 0111223333322 3467789999
Q ss_pred EEccccCCC----CcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 126 ISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 126 i~~ag~~~~----~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
|.++|.... ....++.|..-...+.+...+.+.+-++.+-|
T Consensus 74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 999997542 24567888888888888888887654444433
No 323
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.08 E-value=2e-05 Score=66.01 Aligned_cols=99 Identities=18% Similarity=0.267 Sum_probs=63.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHC-CCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHH-HhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi~~ag~ 131 (200)
.++++|.|.||||++|+.+++.|.++ +.+|..+.++...... ...........|+.+.+.++. .++++|+||.+.+.
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~-i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQS-FGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCC-chhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 46679999999999999999999998 5689888875433111 000111122234433322332 25789999998764
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc
Q 029008 132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167 (200)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~ 167 (200)
. ....++..+ +.| .++|-.|+.
T Consensus 115 ~------------~s~~i~~~~-~~g-~~VIDlSs~ 136 (381)
T PLN02968 115 G------------TTQEIIKAL-PKD-LKIVDLSAD 136 (381)
T ss_pred H------------HHHHHHHHH-hCC-CEEEEcCch
Confidence 1 334556665 345 478888874
No 324
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=98.01 E-value=3.1e-05 Score=71.95 Aligned_cols=77 Identities=21% Similarity=0.125 Sum_probs=59.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC-Cc-------------EEEeecCCCCcccccC-CCCeeEEEccCCCHHHHHHH
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG-LT-------------VASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEA 118 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~ 118 (200)
..+++|+|.|+ |++|+.+++.|.+.+ ++ |.+.+++.+....... ..+++.+..|+.|.+++.++
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~ 645 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY 645 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence 35789999998 999999999998763 33 6767766544221111 13678899999999999999
Q ss_pred hcCCCEEEEcccc
Q 029008 119 LDGVTAVISCVGG 131 (200)
Q Consensus 119 ~~~~d~vi~~ag~ 131 (200)
++++|+||++...
T Consensus 646 v~~~DaVIsalP~ 658 (1042)
T PLN02819 646 VSQVDVVISLLPA 658 (1042)
T ss_pred hcCCCEEEECCCc
Confidence 9999999999874
No 325
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.00 E-value=9.8e-05 Score=60.63 Aligned_cols=129 Identities=9% Similarity=-0.020 Sum_probs=83.3
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-------cEEEeecCCCCcc-c--cc--C------CCCeeEEEccCCCHHHHHH
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSSL-R--DS--W------ANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~-~--~~--~------~~~~~~~~~Dl~d~~~~~~ 117 (200)
.++|.|+|++|.+|..++..|+..|. ++++++....... . .. . ..++.+. ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHH
Confidence 46999999999999999999998874 6888888543311 0 00 0 0112221 12246
Q ss_pred HhcCCCEEEEccccCCCC----cccchhhHHHHHHHHHHHHHcCC-C-EEEEEeccc----c---C-c-CCcCCcchhhh
Q 029008 118 ALDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKGV-K-RFVYISAAD----F---G-V-ANYLLQGYYEG 182 (200)
Q Consensus 118 ~~~~~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~~-~-~~v~vSS~~----~---~-~-~~~~~~~Y~~s 182 (200)
.++++|+||.+||....+ ...+..|+.-...+.+...+.+. + .+|.+|.-. | . . .-++...|+.+
T Consensus 75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t 154 (322)
T cd01338 75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMT 154 (322)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEeh
Confidence 788999999999974422 45678888888888888888773 5 455555321 0 0 1 12344577777
Q ss_pred HHhhHHHHH
Q 029008 183 KDSNLSPLL 191 (200)
Q Consensus 183 K~~~E~~~~ 191 (200)
+...+++..
T Consensus 155 ~LDs~Rl~~ 163 (322)
T cd01338 155 RLDHNRAKS 163 (322)
T ss_pred HHHHHHHHH
Confidence 776666554
No 326
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.99 E-value=5.9e-05 Score=61.63 Aligned_cols=109 Identities=15% Similarity=0.121 Sum_probs=69.0
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCC--CCcccccCC--CC--eeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSG--RSSLRDSWA--NN--VIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~--~~--~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
++|.|+|++|.+|..++..|+..|. +|++++++. +........ .. ......++.-..+++ .++++|+||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~-~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-DVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH-HhCCCCEEEEe
Confidence 5899999999999999999999987 499999854 221100000 00 000000111111233 48899999999
Q ss_pred cccCCCC----cccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 129 VGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 129 ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
+|....+ ...++.|..-...+++...+.+.+ .+|.+++
T Consensus 80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9964322 345677888888888887776544 5666665
No 327
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.97 E-value=3.9e-05 Score=65.72 Aligned_cols=72 Identities=21% Similarity=0.211 Sum_probs=54.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc----cccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL----RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
.+|+++|+|+++ +|..+++.|+++|++|++.+++..... ......++.++.+|..+ ....++|+||+++|
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence 468999999855 999999999999999999998753321 11112357788888765 34567999999998
Q ss_pred cC
Q 029008 131 GF 132 (200)
Q Consensus 131 ~~ 132 (200)
..
T Consensus 78 ~~ 79 (450)
T PRK14106 78 VP 79 (450)
T ss_pred CC
Confidence 64
No 328
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=97.96 E-value=0.0006 Score=50.07 Aligned_cols=132 Identities=20% Similarity=0.190 Sum_probs=76.5
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccC--CC-HHHH----HHHhc--CCCEEEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNL--LS-SDSW----KEALD--GVTAVIS 127 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl--~d-~~~~----~~~~~--~~d~vi~ 127 (200)
.+|+|-|+-|-+|+++++.+.+++|-|.-++-.+.+... .-.++..|- ++ ++++ -+.+. ++|.||.
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~C 78 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFC 78 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----ceEEecCCcchhHHHHHHHHHHHHhhcccccceEEE
Confidence 589999999999999999999999999888776544321 122233332 11 1111 22232 5899999
Q ss_pred ccccCCC---C--------cccchhhHHHHHHHHHHHHHc-CCCEEEEEecc-ccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 128 CVGGFGS---N--------SYMYKINGTANINAIRAASEK-GVKRFVYISAA-DFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 128 ~ag~~~~---~--------~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~-~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
.||.+.. . +-++.-.+...---...+..+ ..+-++-...+ ..-.+.+..-+|+..|+++.++.++.
T Consensus 79 VAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SL 157 (236)
T KOG4022|consen 79 VAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSL 157 (236)
T ss_pred eeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHHHHHHh
Confidence 9987631 1 111221222111112222221 22334444432 22234567789999999999999863
No 329
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.94 E-value=2e-05 Score=67.48 Aligned_cols=73 Identities=21% Similarity=0.210 Sum_probs=59.9
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG 130 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~ag 130 (200)
|+|+|+|+ |.+|..+++.|.++|++|++++++++.........++.++.+|.++++.++++ ++++|.+|.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence 47999998 99999999999999999999998765422211124688999999999999988 888999988754
No 330
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.92 E-value=6.7e-05 Score=62.18 Aligned_cols=97 Identities=16% Similarity=0.197 Sum_probs=58.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHC-CCcEEEeecCCCCccc-ccCCCCeeEE-EccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDR-GLTVASLSRSGRSSLR-DSWANNVIWH-QGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~-~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+|++|+|+||+|++|+.+++.|.+. +++++++.++.+.... ......+..+ ..++.+.+.. .++++|+||.|...
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~ 78 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH 78 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc
Confidence 4579999999999999999999987 5687776664322111 0000111111 1223333322 45789999998754
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
. ....++..+.+.|+ ++|=.|+
T Consensus 79 ~------------~~~~~v~~a~~aG~-~VID~S~ 100 (343)
T PRK00436 79 G------------VSMDLAPQLLEAGV-KVIDLSA 100 (343)
T ss_pred H------------HHHHHHHHHHhCCC-EEEECCc
Confidence 1 12345556656664 7777776
No 331
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.91 E-value=0.00038 Score=60.76 Aligned_cols=142 Identities=15% Similarity=0.076 Sum_probs=93.0
Q ss_pred CCCeEEEEccC-chhHHHHHHHHHHCCCcEEEeecCCCCccc----------ccCCCCeeEEEccCCCHHHHHHHhc---
Q 029008 55 PSEKLLVLGGN-GFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNVIWHQGNLLSSDSWKEALD--- 120 (200)
Q Consensus 55 ~~~~ilVtGa~-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~~~Dl~d~~~~~~~~~--- 120 (200)
..+.++||||+ |.||..++..|+..|.+|++...+-++... .......-++.++.....+++.+++
T Consensus 395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg 474 (866)
T COG4982 395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG 474 (866)
T ss_pred ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence 56789999976 999999999999999999998776544211 1112345677788877777777664
Q ss_pred ------------------CCCEEEEccccCC---------CCcccchhhHHHHHHHHHHHHHcC----CC---EEEEEec
Q 029008 121 ------------------GVTAVISCVGGFG---------SNSYMYKINGTANINAIRAASEKG----VK---RFVYISA 166 (200)
Q Consensus 121 ------------------~~d~vi~~ag~~~---------~~~~~~~~n~~~~~~~~~~a~~~~----~~---~~v~vSS 166 (200)
..|.+|-.|++.. ..+..+++-+.....++-..++.+ +. ++|+-.|
T Consensus 475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS 554 (866)
T COG4982 475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS 554 (866)
T ss_pred cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence 1367777766421 112334554555555555555543 22 5777666
Q ss_pred cccCcCCcCCcchhhhHHhhHHHHHhhccCc
Q 029008 167 ADFGVANYLLQGYYEGKDSNLSPLLACYSLC 197 (200)
Q Consensus 167 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 197 (200)
-.-|.- .....|+.+|.+.|.++..|+.+.
T Consensus 555 PNrG~F-GgDGaYgEsK~aldav~~RW~sEs 584 (866)
T COG4982 555 PNRGMF-GGDGAYGESKLALDAVVNRWHSES 584 (866)
T ss_pred CCCCcc-CCCcchhhHHHHHHHHHHHhhccc
Confidence 422211 123579999999999999887543
No 332
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.89 E-value=0.00012 Score=60.04 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=70.7
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-------cEEEeecCCCC--ccc-ccCCCCee-EEEccCCCHHHHHHHhcCCCE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRS--SLR-DSWANNVI-WHQGNLLSSDSWKEALDGVTA 124 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~-~~~~~~~~-~~~~Dl~d~~~~~~~~~~~d~ 124 (200)
..+|.|+|++|.+|..++..|..+|. ++++++..... ... ........ ....+..-.....+.++++|+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDv 82 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDA 82 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCE
Confidence 35899999999999999999998874 68888886432 110 00000000 000011001123467889999
Q ss_pred EEEccccCCC----CcccchhhHHHHHHHHHHHHHcCC-CEEEEEec
Q 029008 125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKGV-KRFVYISA 166 (200)
Q Consensus 125 vi~~ag~~~~----~~~~~~~n~~~~~~~~~~a~~~~~-~~~v~vSS 166 (200)
||.+||.... ....+..|..-...+.+.+.+.+. +-++.+-|
T Consensus 83 VVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 83 ALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 9999997432 245678888888888988888875 54444444
No 333
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.89 E-value=2.5e-05 Score=56.00 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=53.5
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCc-EEEeecCCCCccc---ccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLT-VASLSRSGRSSLR---DSWANNVIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
...+++++|.|+ |+.|+.++..|.+.|.+ |+++.|+.++..+ ......+.++.. +++.+.+.++|+||++
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~-----~~~~~~~~~~DivI~a 82 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL-----EDLEEALQEADIVINA 82 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG-----GGHCHHHHTESEEEE-
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH-----HHHHHHHhhCCeEEEe
Confidence 357899999998 99999999999999986 9999998655222 111224555543 3345778899999999
Q ss_pred cccC
Q 029008 129 VGGF 132 (200)
Q Consensus 129 ag~~ 132 (200)
.+..
T Consensus 83 T~~~ 86 (135)
T PF01488_consen 83 TPSG 86 (135)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 7753
No 334
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.84 E-value=0.00029 Score=57.50 Aligned_cols=101 Identities=15% Similarity=0.235 Sum_probs=69.0
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCccccc---------CCCCeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDS---------WANNVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
++|.|+|+ |.+|..++..|+..| ++|.+++++.+...... ......+... +. +.+.++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~~----~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---DY----SDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---CH----HHhCCCCEE
Confidence 47999997 999999999999999 58999999766522100 0112222222 22 236799999
Q ss_pred EEccccCCC----CcccchhhHHHHHHHHHHHHHcCCCE-EEEEe
Q 029008 126 ISCVGGFGS----NSYMYKINGTANINAIRAASEKGVKR-FVYIS 165 (200)
Q Consensus 126 i~~ag~~~~----~~~~~~~n~~~~~~~~~~a~~~~~~~-~v~vS 165 (200)
|+++|.... ....+..|..-...+.+.+++.+.+- ++.+|
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 999996432 23566778888888888888877554 44444
No 335
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.82 E-value=0.00019 Score=59.36 Aligned_cols=68 Identities=15% Similarity=0.303 Sum_probs=45.1
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEE---EeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVA---SLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+|+|.||+|++|..+++.|.+++|.+. .+.+......... ..+......|+. ...++++|++|.++|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-FKGKELEVNEAK-----IESFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-eCCeeEEEEeCC-----hHHhcCCCEEEECCCH
Confidence 589999999999999999999888643 3335433221111 122445555553 1234789999999875
No 336
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.82 E-value=4.6e-05 Score=70.48 Aligned_cols=145 Identities=18% Similarity=0.223 Sum_probs=101.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEE-EeecCCCCc-cc----ccC---CCCeeEEEccCCCHHHHHHHhcC----
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVA-SLSRSGRSS-LR----DSW---ANNVIWHQGNLLSSDSWKEALDG---- 121 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~-~~~r~~~~~-~~----~~~---~~~~~~~~~Dl~d~~~~~~~~~~---- 121 (200)
..|..+|+||-|+.|..+++.|..+|.+-. +.+|+.-+. .+ ..| .-++.+-..|++..+....+++.
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence 357899999999999999999999998544 445543221 11 112 22455566777777777777763
Q ss_pred --CCEEEEccccCC----------CCcccchhhHHHHHHHHHHHHHcC--CCEEEEEeccccCcCCcCCcchhhhHHhhH
Q 029008 122 --VTAVISCVGGFG----------SNSYMYKINGTANINAIRAASEKG--VKRFVYISAADFGVANYLLQGYYEGKDSNL 187 (200)
Q Consensus 122 --~d~vi~~ag~~~----------~~~~~~~~n~~~~~~~~~~a~~~~--~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E 187 (200)
+..|||.|.... +.+..-+.-+.++.++=+..++.. .+-||..||.+.|..+...+.||.+..+.|
T Consensus 1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~ME 1926 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAME 1926 (2376)
T ss_pred ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHHH
Confidence 578888887432 112233445677777666666654 467999999888999999999999999999
Q ss_pred HHHHhh----ccCccc
Q 029008 188 SPLLAC----YSLCCL 199 (200)
Q Consensus 188 ~~~~~~----~~~~~~ 199 (200)
+++..- ||.+.|
T Consensus 1927 RiceqRr~~GfPG~Ai 1942 (2376)
T KOG1202|consen 1927 RICEQRRHEGFPGTAI 1942 (2376)
T ss_pred HHHHHhhhcCCCccee
Confidence 999863 776554
No 337
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.81 E-value=0.00016 Score=59.02 Aligned_cols=106 Identities=19% Similarity=0.125 Sum_probs=70.7
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCccccc--CC--CCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDS--WA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
++|.|+|++|.+|..++..|..+| .++.+++.+ ....+.. .. ....+... ...+++.+.++++|+||.+||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvitaG 77 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIPAG 77 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEeCC
Confidence 489999999999999999999888 478888876 2111110 01 11122211 012235678899999999999
Q ss_pred cCCCC----cccchhhHHHHHHHHHHHHHcCCCE-EEEEe
Q 029008 131 GFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYIS 165 (200)
Q Consensus 131 ~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~~-~v~vS 165 (200)
....+ ...++.|..-...+++...+.+.+- +|.+|
T Consensus 78 ~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt 117 (310)
T cd01337 78 VPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS 117 (310)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 74322 4467788888888888888887664 44444
No 338
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.81 E-value=0.0002 Score=59.09 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=54.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcE---EEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTV---ASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
++.+|.|+||||++|..+++.|.++++.+ ..+....... +.....+ ...++.+.+.. + ++++|++|.+.+.
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG-~~l~~~~---~~l~~~~~~~~-~-~~~vD~vFla~p~ 76 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAG-HSVPFAG---KNLRVREVDSF-D-FSQVQLAFFAAGA 76 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCC-CeeccCC---cceEEeeCChH-H-hcCCCEEEEcCCH
Confidence 34689999999999999999999877643 3333222111 1011111 12333333322 2 4789999998763
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
. ....+++.+.+.|+ ++|=.|+
T Consensus 77 ~------------~s~~~v~~~~~~G~-~VIDlS~ 98 (336)
T PRK05671 77 A------------VSRSFAEKARAAGC-SVIDLSG 98 (336)
T ss_pred H------------HHHHHHHHHHHCCC-eEEECch
Confidence 1 11235666666776 4666665
No 339
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.76 E-value=0.00078 Score=55.20 Aligned_cols=103 Identities=14% Similarity=0.209 Sum_probs=70.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCccc------cc--CCCCeeEEEccCCCHHHHHHHhcCCCE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTA 124 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~------~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 124 (200)
.+++|.|+|+ |.+|..++..|+.+|. ++.+++++.+.... .. ...++.+... ++ +.++++|+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~------~~-~~~~~adi 76 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG------DY-SDCKDADL 76 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC------CH-HHhCCCCE
Confidence 4569999998 9999999999999986 79999987654211 10 0123333322 13 34789999
Q ss_pred EEEccccCCC----CcccchhhHHHHHHHHHHHHHcCCC-EEEEEe
Q 029008 125 VISCVGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYIS 165 (200)
Q Consensus 125 vi~~ag~~~~----~~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vS 165 (200)
||.++|.... ....+..|..-...+++.+.+.+.+ .++.+|
T Consensus 77 vIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 77 VVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 9999997442 2456677888888888888877655 344444
No 340
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.76 E-value=0.00015 Score=60.23 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=56.2
Q ss_pred CeEEEEccCchhHHHHHHHHHHC-CCcEEEe-ecCCCC--cccccCCCCeeEE-EccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDR-GLTVASL-SRSGRS--SLRDSWANNVIWH-QGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~-~r~~~~--~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
++|.|+||||++|..+++.|.+. +.++..+ +++... ...... ..+... ..++.+. +.+++++++|++|.|.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH-PHLRGLVDLNLEPI-DEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC-ccccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence 47999999999999999999977 5677744 443321 111001 111111 1112211 223444689999998764
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
. ....++..+.+.| .++|=.|+
T Consensus 79 ~------------~s~~~~~~~~~~G-~~VIDlS~ 100 (346)
T TIGR01850 79 G------------VSAELAPELLAAG-VKVIDLSA 100 (346)
T ss_pred h------------HHHHHHHHHHhCC-CEEEeCCh
Confidence 2 2345566666666 47888887
No 341
>PRK05442 malate dehydrogenase; Provisional
Probab=97.75 E-value=0.00045 Score=56.82 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=69.1
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-------cEEEeecCCCCc-cc--cc--C------CCCeeEEEccCCCHHHHHH
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-------TVASLSRSGRSS-LR--DS--W------ANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~-~~--~~--~------~~~~~~~~~Dl~d~~~~~~ 117 (200)
+++|.|+|++|.+|..++..|...|. ++.+++.++... .. .. . ..++.+. ....+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChHH
Confidence 46999999999999999999988763 688888754321 11 00 0 0112211 12246
Q ss_pred HhcCCCEEEEccccCC----CCcccchhhHHHHHHHHHHHHHcC-CC-EEEEEec
Q 029008 118 ALDGVTAVISCVGGFG----SNSYMYKINGTANINAIRAASEKG-VK-RFVYISA 166 (200)
Q Consensus 118 ~~~~~d~vi~~ag~~~----~~~~~~~~n~~~~~~~~~~a~~~~-~~-~~v~vSS 166 (200)
.++++|+||.+||... +....+..|..-...+.+...++. .+ .+|.+|.
T Consensus 77 ~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 77 AFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 7889999999999643 224567888888888888888854 34 4555553
No 342
>PRK04148 hypothetical protein; Provisional
Probab=97.74 E-value=0.00016 Score=51.50 Aligned_cols=96 Identities=11% Similarity=0.125 Sum_probs=70.4
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGS 134 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~ 134 (200)
.+++++++|. | -|..++..|.+.|++|++++.++... +......+.++.+|+.+++ -++-+++|.|+.. .+
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV-~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysi----rp 86 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAV-EKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSI----RP 86 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHH-HHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEe----CC
Confidence 3478999997 5 89999999999999999999987642 1122346789999999887 4667789999874 33
Q ss_pred CcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 135 NSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 135 ~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+.++ ...+++.+++.++.-+|..=|
T Consensus 87 p~el-------~~~~~~la~~~~~~~~i~~l~ 111 (134)
T PRK04148 87 PRDL-------QPFILELAKKINVPLIIKPLS 111 (134)
T ss_pred CHHH-------HHHHHHHHHHcCCCEEEEcCC
Confidence 3333 245688888888875554333
No 343
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.72 E-value=0.00025 Score=49.13 Aligned_cols=70 Identities=17% Similarity=0.299 Sum_probs=53.9
Q ss_pred EEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029008 59 LLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG 130 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~ag 130 (200)
|+|.|. |.+|..+++.|.+.+++|++++++++... ......+.++.+|.+|++.++++ +++++.+|-+..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~-~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVE-ELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHH-HHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHH-HHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 578887 89999999999998779999998865421 11234588999999999999875 567898888654
No 344
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.70 E-value=0.00032 Score=60.09 Aligned_cols=101 Identities=18% Similarity=0.283 Sum_probs=70.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc-CCCCeeEEEccCCCHHHHHH-HhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKE-ALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi~~ag~ 131 (200)
..+++++|+|+ |.+|..+++.|.+.|++|++++++++...... ...++.++.+|.++++.+++ .++++|.||-+...
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~ 307 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence 45789999998 99999999999999999999998865422111 12367889999999998865 45689999875432
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 132 FGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
. ..|... ...+++.+..++|....
T Consensus 308 ---~----~~n~~~----~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 308 ---D----EANILS----SLLAKRLGAKKVIALVN 331 (453)
T ss_pred ---c----HHHHHH----HHHHHHhCCCeEEEEEC
Confidence 1 234332 33445556666665544
No 345
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.70 E-value=0.00027 Score=57.78 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=70.0
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCccccc--CC--CCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLRDS--WA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~--~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+|.|+|++|.+|..++..|+.++. ++.++++++.. .+.. .. ....+.... +.+++.+.++++|+||.++|.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~ 77 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGV 77 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCC
Confidence 589999999999999999998875 78888886621 1111 00 111222100 112345788999999999996
Q ss_pred CCC----CcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 132 FGS----NSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 132 ~~~----~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
... ....+..|+.-...+.+...+.+.+-+|.+-|
T Consensus 78 ~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 78 PRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred CCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 432 24567788888888888888777664444433
No 346
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.69 E-value=0.00048 Score=54.80 Aligned_cols=68 Identities=16% Similarity=0.213 Sum_probs=45.7
Q ss_pred CCeEEEEccCchhHHHHHHHHHHC-CCcEEEee-cCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDR-GLTVASLS-RSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+++|.|+|++|.+|+.+++.+.+. +.++.++. ++.+.... . -..++...++++++++++|+||.+..+
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~-~-------~~~~i~~~~dl~~ll~~~DvVid~t~p 70 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG-Q-------GALGVAITDDLEAVLADADVLIDFTTP 70 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-c-------CCCCccccCCHHHhccCCCEEEECCCH
Confidence 368999999999999999998875 57777654 44332211 1 112333345567777789999987643
No 347
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.67 E-value=0.00075 Score=47.35 Aligned_cols=89 Identities=17% Similarity=0.325 Sum_probs=52.5
Q ss_pred eEEEEccCchhHHHHHHHHHHCC-CcEEEe-ecCCCCc--ccccCC-----CCeeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 58 KLLVLGGNGFVGSHICREALDRG-LTVASL-SRSGRSS--LRDSWA-----NNVIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~-~r~~~~~--~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
||.|+||||++|+.+++.|.+.- .++..+ .++.... .....+ ....+.. .+.+ .+.++|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED---ADPE----ELSDVDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE---TSGH----HHTTESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee---cchh----HhhcCCEEEec
Confidence 68999999999999999999964 354444 4443121 111111 1222222 2232 34889999999
Q ss_pred cccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 129 VGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 129 ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
.+.. ....+.+.+.+.|+ ++|=.|+
T Consensus 74 ~~~~------------~~~~~~~~~~~~g~-~ViD~s~ 98 (121)
T PF01118_consen 74 LPHG------------ASKELAPKLLKAGI-KVIDLSG 98 (121)
T ss_dssp SCHH------------HHHHHHHHHHHTTS-EEEESSS
T ss_pred Cchh------------HHHHHHHHHhhCCc-EEEeCCH
Confidence 7641 22445666677777 5665555
No 348
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.59 E-value=0.00034 Score=52.08 Aligned_cols=57 Identities=26% Similarity=0.348 Sum_probs=48.0
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
...+++|+|+|+++.+|..+++.|.++|.+|+++.|+. +++.+.+.++|+||.+.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~ 97 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK 97 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence 46789999999966689999999999999999888752 3466788899999998875
No 349
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.59 E-value=0.0012 Score=54.69 Aligned_cols=69 Identities=20% Similarity=0.342 Sum_probs=42.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCc---EEEeec--CCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLT---VASLSR--SGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~---V~~~~r--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
...+|.|.||+|++|..+++.|.+++|. +..+.. +..+.... .+......++ ++ ..++++|+||.++
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~---~~~~~~v~~~-~~----~~~~~~D~vf~a~ 77 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF---EGRDYTVEEL-TE----DSFDGVDIALFSA 77 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee---cCceeEEEeC-CH----HHHcCCCEEEECC
Confidence 3468999999999999999999998873 333332 22221111 1122222233 22 2347899999988
Q ss_pred cc
Q 029008 130 GG 131 (200)
Q Consensus 130 g~ 131 (200)
+.
T Consensus 78 p~ 79 (344)
T PLN02383 78 GG 79 (344)
T ss_pred Cc
Confidence 64
No 350
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.58 E-value=7.2e-05 Score=54.52 Aligned_cols=76 Identities=14% Similarity=0.064 Sum_probs=50.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
..+++++|+|+ |.+|..+++.|.+.| ++|.+.+|+.++..+....-....+..+..+. .++++++|+||++....
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~ 92 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPVG 92 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCCC
Confidence 35679999998 999999999999996 78999988755422111000111112233333 34478899999998764
Q ss_pred C
Q 029008 133 G 133 (200)
Q Consensus 133 ~ 133 (200)
.
T Consensus 93 ~ 93 (155)
T cd01065 93 M 93 (155)
T ss_pred C
Confidence 3
No 351
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.55 E-value=0.00013 Score=51.59 Aligned_cols=89 Identities=18% Similarity=0.273 Sum_probs=52.8
Q ss_pred CeEEEEccCchhHHHHHHHHHH-CCCcEEEee-cCCCCcccccCC--CCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 57 EKLLVLGGNGFVGSHICREALD-RGLTVASLS-RSGRSSLRDSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~-~g~~V~~~~-r~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
++|.|.|++|.+|+.+++.+.+ .+.++.+.. |+.+........ .+.. ...+.-.++++++++.+|++|.+..+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~p- 77 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTNP- 77 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES-H-
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCCh-
Confidence 4899999999999999999999 577765554 444221110000 0000 01111125578888889999996422
Q ss_pred CCCcccchhhHHHHHHHHHHHHHcCCC
Q 029008 133 GSNSYMYKINGTANINAIRAASEKGVK 159 (200)
Q Consensus 133 ~~~~~~~~~n~~~~~~~~~~a~~~~~~ 159 (200)
......++.+.++|+.
T Consensus 78 -----------~~~~~~~~~~~~~g~~ 93 (124)
T PF01113_consen 78 -----------DAVYDNLEYALKHGVP 93 (124)
T ss_dssp -----------HHHHHHHHHHHHHT-E
T ss_pred -----------HHhHHHHHHHHhCCCC
Confidence 3445667888888763
No 352
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.54 E-value=0.0028 Score=52.15 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=68.1
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCccc---------ccCCCCeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR---------DSWANNVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
.++|.|+|+ |.+|..++..++..|. +|++++.+++.... ........+... .| + +.++++|+|
T Consensus 6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aDiV 78 (321)
T PTZ00082 6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSDVV 78 (321)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCCEE
Confidence 469999996 9999999999999995 89999987764211 000112233221 12 3 357899999
Q ss_pred EEccccCCCCc---------ccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 126 ISCVGGFGSNS---------YMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 126 i~~ag~~~~~~---------~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
|.++|....+. ..+..|+.-...+++.+.+.+.+ .+|++|.
T Consensus 79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99998643222 24455666666777777777655 5666664
No 353
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.53 E-value=0.0006 Score=55.97 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=68.0
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccc-c---C-----CCCeeEEEccCCCHHHHHHHhcCCCE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD-S---W-----ANNVIWHQGNLLSSDSWKEALDGVTA 124 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~-~---~-----~~~~~~~~~Dl~d~~~~~~~~~~~d~ 124 (200)
..++|.|+|| |.+|..++..+...| .++++++.+++..... . . .....+. ...+++ .++++|+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-----~~~d~~-~l~~ADi 76 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-----GTNNYE-DIKDSDV 76 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEE-----eCCCHH-HhCCCCE
Confidence 4569999997 999999999999888 6888999876542110 0 0 0011111 112344 6789999
Q ss_pred EEEccccCCCC----cccchhhHHHHHHHHHHHHHcCCCE-EEEEec
Q 029008 125 VISCVGGFGSN----SYMYKINGTANINAIRAASEKGVKR-FVYISA 166 (200)
Q Consensus 125 vi~~ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~~-~v~vSS 166 (200)
||.++|....+ ...+..|..-...+++.+.+.+.+. +|++|.
T Consensus 77 VVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 77 VVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999864422 3345566666666777777766554 555554
No 354
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.52 E-value=0.0012 Score=54.69 Aligned_cols=99 Identities=11% Similarity=0.196 Sum_probs=66.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc-------------------c-----c---ccC-CCCeeE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS-------------------L-----R---DSW-ANNVIW 104 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~-----~---~~~-~~~~~~ 104 (200)
...++|+|+|+ |++|..+++.|...|. ++++++++.-+. + + ... .-+++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 45679999998 8999999999999997 888888864110 0 0 001 124566
Q ss_pred EEccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 105 HQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 105 ~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+..|++ ++.++++++++|+||.+...+ ..-..+-+.|.+.++ .+|+.+.
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~D~~-----------~~r~~in~~~~~~~i-p~i~~~~ 149 (338)
T PRK12475 101 VVTDVT-VEELEELVKEVDLIIDATDNF-----------DTRLLINDLSQKYNI-PWIYGGC 149 (338)
T ss_pred EeccCC-HHHHHHHhcCCCEEEEcCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence 777774 567888899999999985321 112334566777775 4666654
No 355
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.52 E-value=0.00085 Score=54.59 Aligned_cols=108 Identities=16% Similarity=0.112 Sum_probs=70.8
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCcccc-cC-CCCeeEEE--ccCCCHHHHHHHhcCCCEEEEccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRD-SW-ANNVIWHQ--GNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~-~~~~~~~~--~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
++|.|+|+ |.+|+.++..|..++ .++.+++...+...-. .. .....+.. .++....+ .+.+++.|+|+-+||
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 58999999 999999999998775 3889999884332110 00 00001110 11111111 456789999999999
Q ss_pred cCCCC----cccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 131 GFGSN----SYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 131 ~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
....+ ...++.|..-...+.+...+.+.+-++++-|
T Consensus 79 ~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 79 VPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 75533 4577888888888888888887765555555
No 356
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.47 E-value=0.0017 Score=53.77 Aligned_cols=99 Identities=16% Similarity=0.236 Sum_probs=67.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc-------------------c-----c---ccCC-CCeeE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS-------------------L-----R---DSWA-NNVIW 104 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~-----~---~~~~-~~~~~ 104 (200)
....+|+|+|+ |++|..+++.|...|. ++++++.+.-+. + + ...+ -+++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 45679999998 9999999999999998 889888763110 0 0 0011 13556
Q ss_pred EEccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 105 HQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 105 ~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+..+++ ++.+.++++++|+||.+... ...-..+-++|.+.++ .+|+.+.
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn-----------~~~r~~ln~~~~~~~i-P~i~~~~ 149 (339)
T PRK07688 101 IVQDVT-AEELEELVTGVDLIIDATDN-----------FETRFIVNDAAQKYGI-PWIYGAC 149 (339)
T ss_pred EeccCC-HHHHHHHHcCCCEEEEcCCC-----------HHHHHHHHHHHHHhCC-CEEEEee
Confidence 666764 55677888999999998432 2223356677777775 4666664
No 357
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=97.46 E-value=0.0013 Score=52.27 Aligned_cols=109 Identities=19% Similarity=0.151 Sum_probs=70.0
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEe---ecCC-CCccccc--CCCCeeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASL---SRSG-RSSLRDS--WANNVIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~---~r~~-~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
.+.+|.|.||+|+||+.|...|. ....|.-+ +-.. +.-.... ...+..+. ..+-++.++.+++++|+||--
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~--g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVV--GFTGADGLENALKGADVVVIP 103 (345)
T ss_pred CcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCcee--ccCChhHHHHHhcCCCEEEec
Confidence 45699999999999999977665 44333222 2111 1100000 01111221 233456899999999999999
Q ss_pred cccCCCC----cccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 129 VGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 129 ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
||....+ ++.|.+|.--...+..++.+...+ .+.+||.
T Consensus 104 AGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 104 AGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred CCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 9976533 678999988888888888777654 4555554
No 358
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.37 E-value=0.0019 Score=53.75 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=29.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG 90 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~ 90 (200)
+++|+|+||+|++|+.+++.|.+... +++.+.++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 57999999999999999999998765 888774543
No 359
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.36 E-value=0.00043 Score=61.05 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=58.6
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHH-hcCCCEEEEcc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV 129 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a 129 (200)
..+++|.|+ |.+|+.+++.|.++|++|++++.++++..+ ....+..++.+|.+|++.++++ ++++|.++-+.
T Consensus 417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~-~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDE-LRERGIRAVLGNAANEEIMQLAHLDCARWLLLTI 489 (558)
T ss_pred CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence 468999997 999999999999999999999988765322 2235789999999999988864 46789877654
No 360
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.34 E-value=0.00052 Score=55.49 Aligned_cols=71 Identities=23% Similarity=0.201 Sum_probs=51.9
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
...+++++|+|. |.+|+.+++.|...|++|++.+|+.++... ....+...+ +.+++.+.+.++|+||++..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~~~~g~~~~-----~~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR-ITEMGLIPF-----PLNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCCCeee-----cHHHHHHHhccCCEEEECCC
Confidence 456789999998 899999999999999999999987643211 111122221 24556778889999999864
No 361
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.33 E-value=0.00091 Score=55.51 Aligned_cols=75 Identities=25% Similarity=0.368 Sum_probs=51.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc----CCCEEEEc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD----GVTAVISC 128 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~vi~~ 128 (200)
..++.|||.||+|++|.+.++-+...| .+|+...+.+..+.... ..... ..|+.+++.++...+ ++|+|+.|
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-lGAd~--vvdy~~~~~~e~~kk~~~~~~DvVlD~ 232 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-LGADE--VVDYKDENVVELIKKYTGKGVDVVLDC 232 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-cCCcE--eecCCCHHHHHHHHhhcCCCccEEEEC
Confidence 467799999999999999999999999 45555444332221111 11122 247777666655554 59999999
Q ss_pred ccc
Q 029008 129 VGG 131 (200)
Q Consensus 129 ag~ 131 (200)
.|.
T Consensus 233 vg~ 235 (347)
T KOG1198|consen 233 VGG 235 (347)
T ss_pred CCC
Confidence 986
No 362
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.33 E-value=0.0067 Score=49.55 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=70.9
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCccc------c--cC-C-CCeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D--SW-A-NNVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~------~--~~-~-~~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
+|.|+|+ |.+|..++..|+.+|. ++++++.+.+.... + .. . ..+.+...| .+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence 5789998 9999999999998874 78999987554211 1 01 1 134444333 3578899999
Q ss_pred EEccccCCCC------cccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 126 ISCVGGFGSN------SYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 126 i~~ag~~~~~------~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
|.+||....+ ...+..|..-...+.+...+.+.+-++.+-|
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs 119 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT 119 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 9999964322 4556788888888888888887665555544
No 363
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.33 E-value=0.0038 Score=53.35 Aligned_cols=104 Identities=14% Similarity=0.130 Sum_probs=71.1
Q ss_pred CCeEEEEccCchhHHHHHHHHHHC-------CC--cEEEeecCCCCccc------cc---CCCCeeEEEccCCCHHHHHH
Q 029008 56 SEKLLVLGGNGFVGSHICREALDR-------GL--TVASLSRSGRSSLR------DS---WANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~------~~---~~~~~~~~~~Dl~d~~~~~~ 117 (200)
.-+|.|+|++|.+|.+++..|+.. |. +++.++++.+.... .. ...++.+...| .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~-------ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDP-------YE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCC-------HH
Confidence 459999999999999999999988 54 78888887665221 00 01122222211 45
Q ss_pred HhcCCCEEEEccccCCC----CcccchhhHHHHHHHHHHHHH-cCCC-EEEEEec
Q 029008 118 ALDGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASE-KGVK-RFVYISA 166 (200)
Q Consensus 118 ~~~~~d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~~a~~-~~~~-~~v~vSS 166 (200)
.++++|+||..+|.... ....++.|+.-...+.+...+ ++.+ .+|.+|.
T Consensus 173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 68899999999997432 245678888888888888888 5655 4554543
No 364
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.33 E-value=0.0062 Score=43.43 Aligned_cols=97 Identities=19% Similarity=0.286 Sum_probs=65.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc----------c-c--------------ccC-CCCeeEEEcc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS----------L-R--------------DSW-ANNVIWHQGN 108 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------~-~--------------~~~-~~~~~~~~~D 108 (200)
.++|+|.|+ |.+|..+++.|...|. ++++++...=.. . . ... ..+++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 368999998 9999999999999997 788887653110 0 0 011 1256677777
Q ss_pred CCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 109 l~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+ +.+.+.+.++++|+||.+... ...-..+.+.|.+.+. .+|..+.
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~-----------~~~~~~l~~~~~~~~~-p~i~~~~ 125 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDS-----------LAARLLLNEICREYGI-PFIDAGV 125 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSS-----------HHHHHHHHHHHHHTT--EEEEEEE
T ss_pred c-ccccccccccCCCEEEEecCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence 7 566778888999999997543 1222345667777765 6777765
No 365
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.32 E-value=0.00067 Score=55.36 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=31.1
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR 91 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 91 (200)
++|.|+|+ |.+|..++..|++.|++|++.+|+++
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPA 36 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence 57999995 99999999999999999999999864
No 366
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.31 E-value=0.0016 Score=53.07 Aligned_cols=109 Identities=14% Similarity=0.185 Sum_probs=64.8
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccC----CCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSW----ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
|++|.|+|+ |.+|..++..++..|. +|++++++++....... ..........+....++ +.++++|+||.++|
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence 479999998 9999999999998875 89999986654211000 00000000111111123 34789999999998
Q ss_pred cCCCCc----ccchhhHHHHHHHHHHHHHcCCCE-EEEEec
Q 029008 131 GFGSNS----YMYKINGTANINAIRAASEKGVKR-FVYISA 166 (200)
Q Consensus 131 ~~~~~~----~~~~~n~~~~~~~~~~a~~~~~~~-~v~vSS 166 (200)
....+. ..+.-|..-...+++...+...+. +|.+|.
T Consensus 80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 543221 233456666666666666665443 555553
No 367
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=97.30 E-value=0.0016 Score=54.63 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=54.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
+++|+|.|+ |.+|+.++..+.+.|++|++++.+++.+.... --..+.+|+.|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~---ad~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV---ADEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh---CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 578999998 89999999999999999999987655432211 124566789999999999999998754
No 368
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.26 E-value=0.0014 Score=58.35 Aligned_cols=73 Identities=14% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG 130 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~ag 130 (200)
..+|+|.|. |.+|+.+++.|.++|+++++++.+++.-.. ....+..++.+|.+|++.++++ ++++|.+|-+.+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNL-MRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHH-HHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 468999997 999999999999999999999988765322 2234688999999999999875 568998888653
No 369
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.26 E-value=0.0025 Score=54.56 Aligned_cols=73 Identities=18% Similarity=0.090 Sum_probs=49.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc---cccCCCCeeEEEccCCCHHHHHHHhc-CCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL---RDSWANNVIWHQGNLLSSDSWKEALD-GVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi~~ag 130 (200)
.+++++|||+++ +|.++++.|++.|++|.+.+++..... ......++.+..++ ++.. .+. ++|.||++.|
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~---~~~~~~d~vV~s~g 77 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLE---LLDEDFDLMVKNPG 77 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHH---HhcCcCCEEEECCC
Confidence 468999999965 999999999999999999987653311 11112345554433 2222 233 4999999998
Q ss_pred cCC
Q 029008 131 GFG 133 (200)
Q Consensus 131 ~~~ 133 (200)
...
T Consensus 78 i~~ 80 (447)
T PRK02472 78 IPY 80 (447)
T ss_pred CCC
Confidence 643
No 370
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.25 E-value=0.001 Score=55.85 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=33.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRS 89 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~ 89 (200)
+..++|.|+||.|.+|..+++.|.+.|++|++.+|+
T Consensus 96 ~~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 96 PDLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred cccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 466899999999999999999999999999999875
No 371
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=97.25 E-value=0.0022 Score=52.30 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=66.8
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCccccc----CCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDS----WANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
++|.|+|+ |.+|..++..|+.+|+ +|++++...+...... ...........+.-..++++ ++++|+||-++|.
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 58999997 9999999999999886 8999998644321110 00000000011111122333 6789999999996
Q ss_pred CCCCc----ccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 132 FGSNS----YMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 132 ~~~~~----~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
...+. ..+..|..-...+++...+.+.+ .+|.+|.
T Consensus 80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 44321 34567777777778877766544 4555554
No 372
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.24 E-value=0.0031 Score=49.26 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=64.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c-----------------------cccCC-CCeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L-----------------------RDSWA-NNVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~-----------------------~~~~~-~~~~~~~ 106 (200)
....+|+|.|+ |++|.++++.|...|. ++++++.+.-.. . ....+ .+++.+.
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 35679999997 9999999999999997 677766542110 0 00111 2455665
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
.++ +.+.+.+.++++|+||.|.... ..-..+-+.|.+.++ .+|+.+.
T Consensus 98 ~~i-~~~~~~~~~~~~DvVi~~~d~~-----------~~r~~l~~~~~~~~i-p~i~~g~ 144 (228)
T cd00757 98 ERL-DAENAEELIAGYDLVLDCTDNF-----------ATRYLINDACVKLGK-PLVSGAV 144 (228)
T ss_pred cee-CHHHHHHHHhCCCEEEEcCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence 555 3566778889999999986532 112345667777765 4666554
No 373
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.24 E-value=0.0013 Score=52.38 Aligned_cols=107 Identities=15% Similarity=0.059 Sum_probs=67.2
Q ss_pred EEEEccCchhHHHHHHHHHHCC----CcEEEeecCCCCcccccC--CCCeeE-EEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 59 LLVLGGNGFVGSHICREALDRG----LTVASLSRSGRSSLRDSW--ANNVIW-HQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~--~~~~~~-~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
|.|+||+|.+|..++..|+..| .+|.+++++++....... ..-... ....+.-.++..+.++++|+||.++|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799999999999999999998 689999987644211000 000000 011121122346778999999999986
Q ss_pred CCCC----cccchhhHHHHHHHHHHHHHcCCCE-EEEEe
Q 029008 132 FGSN----SYMYKINGTANINAIRAASEKGVKR-FVYIS 165 (200)
Q Consensus 132 ~~~~----~~~~~~n~~~~~~~~~~a~~~~~~~-~v~vS 165 (200)
...+ ......|+.-...+++.+.+.+.+- ++.+|
T Consensus 81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4322 2245566777777788887776554 44443
No 374
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.23 E-value=0.012 Score=46.64 Aligned_cols=74 Identities=15% Similarity=0.185 Sum_probs=58.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEccccC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGGF 132 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~~ 132 (200)
++++|+|.||| .=|+.+++.|.+.|++|++..-..... .....+.++.+-+.|.+.+.+.+. +++.||...-++
T Consensus 1 ~~~~IlvlgGT-~egr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 1 MMPRILLLGGT-SEARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred CCceEEEEech-HHHHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 46789999997 679999999999999988876655333 223467788888879999999986 699999976543
No 375
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.22 E-value=0.0014 Score=52.80 Aligned_cols=56 Identities=16% Similarity=0.275 Sum_probs=45.3
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
...+++++|.|++|.+|+.++..|+++|+.|+++.|+. .++.+.++++|+||++.|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG 211 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVG 211 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccC
Confidence 45789999999988899999999999999888876631 124555678889988886
No 376
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.21 E-value=0.00077 Score=56.49 Aligned_cols=75 Identities=17% Similarity=0.123 Sum_probs=54.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
...+++|+|+ |.+|...++.|...|.+|++++|+.++.......-. ..+..+..+++.+.+.+.++|+||++++.
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g-~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG-GRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC-ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 3467999997 999999999999999999999987544211100001 12334556778888899999999998854
No 377
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.21 E-value=0.00037 Score=56.12 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=49.2
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccc--cCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRD--SWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
...+++++|+|+ |++|++++..|...| .+|+++.|+.++.... ...... .+..++ +..+.+.++|+||++.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~~~----~~~~~~~~~DivInaT 193 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAELDL----ELQEELADFDLIINAT 193 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceeecc----cchhccccCCEEEECC
Confidence 356789999997 999999999999999 6999999986542111 001100 011111 2245667899999997
Q ss_pred cc
Q 029008 130 GG 131 (200)
Q Consensus 130 g~ 131 (200)
..
T Consensus 194 p~ 195 (278)
T PRK00258 194 SA 195 (278)
T ss_pred cC
Confidence 53
No 378
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.21 E-value=0.00052 Score=55.73 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=51.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..+++++|+|. |.+|+.++..|...|.+|++.+|+...... ....+.+++ +.+++.+.+.++|+||++..
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p 219 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR-ITEMGLSPF-----HLSELAEEVGKIDIIFNTIP 219 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence 35789999997 889999999999999999999998544211 111223332 23456778889999999864
No 379
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.21 E-value=0.00048 Score=51.70 Aligned_cols=76 Identities=17% Similarity=0.104 Sum_probs=51.7
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
...++++.|.|. |.||+.+++.|...|.+|++.+|....... .....+ ...+++++++.+|+|+.+....
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~~~~--------~~~~l~ell~~aDiv~~~~plt 102 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEG-ADEFGV--------EYVSLDELLAQADIVSLHLPLT 102 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHH-HHHTTE--------EESSHHHHHHH-SEEEE-SSSS
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhh-cccccc--------eeeehhhhcchhhhhhhhhccc
Confidence 457899999997 999999999999999999999998654320 000111 1235678888999999987754
Q ss_pred CCCccc
Q 029008 133 GSNSYM 138 (200)
Q Consensus 133 ~~~~~~ 138 (200)
.....+
T Consensus 103 ~~T~~l 108 (178)
T PF02826_consen 103 PETRGL 108 (178)
T ss_dssp TTTTTS
T ss_pred ccccee
Confidence 433333
No 380
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.21 E-value=0.0018 Score=52.89 Aligned_cols=101 Identities=18% Similarity=0.212 Sum_probs=65.6
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCccc------cc--CCCCeeEEEccCCCHHHHHHHhcCCCEEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAVI 126 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~------~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 126 (200)
++|.|+|+ |.+|..++..|+.+| .+|.+++++.+.... .. ......+... | + +.++++|++|
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence 47999998 999999999999999 589999988654221 00 0011222222 2 2 3478999999
Q ss_pred EccccCCCC----cccchhhHHHHHHHHHHHHHcCCCEEEEEe
Q 029008 127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVKRFVYIS 165 (200)
Q Consensus 127 ~~ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~~~v~vS 165 (200)
.+++....+ ...+..|..-...+++.+.+.+.+-++.+-
T Consensus 73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~ 115 (308)
T cd05292 73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV 115 (308)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 999964322 234456766667777777766654444433
No 381
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.20 E-value=0.00064 Score=52.04 Aligned_cols=39 Identities=18% Similarity=0.257 Sum_probs=34.0
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
...+|+++|+|. |.+|+++++.|.+.|++|++.+++.+.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~ 63 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEA 63 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 357789999998 799999999999999999988877543
No 382
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.17 E-value=0.0026 Score=54.78 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcc----------------CchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHH
Q 029008 53 PPPSEKLLVLGG----------------NGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK 116 (200)
Q Consensus 53 ~~~~~~ilVtGa----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 116 (200)
+..+++|+||+| +|.+|.+|++.+..+|++|+++.-.... ..+.+++++..+ ..+++.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~----~~p~~v~~i~V~--ta~eM~ 326 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL----ADPQGVKVIHVE--SARQML 326 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC----CCCCCceEEEec--CHHHHH
Confidence 468899999965 6899999999999999999998743221 123466766543 444444
Q ss_pred HHhc---CCCEEEEccccCC
Q 029008 117 EALD---GVTAVISCVGGFG 133 (200)
Q Consensus 117 ~~~~---~~d~vi~~ag~~~ 133 (200)
+++. ..|++|++|++.+
T Consensus 327 ~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 327 AAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred HHHHhhCCCCEEEEeccccc
Confidence 4332 3799999999643
No 383
>PRK08223 hypothetical protein; Validated
Probab=97.17 E-value=0.005 Score=49.61 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=64.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c--c---------------------ccCC-CCeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L--R---------------------DSWA-NNVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~--~---------------------~~~~-~~~~~~~ 106 (200)
....+|+|+|+ |++|..+++.|+..|. ++.+++.+.-+. . + ...+ -+++.+.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 35679999998 9999999999999996 677777653110 0 0 0011 2455565
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..++ ++.+.++++++|+||.+.-.+ ++..-..+-++|.+.++ .+|+.+.
T Consensus 104 ~~l~-~~n~~~ll~~~DlVvD~~D~~---------~~~~r~~ln~~c~~~~i-P~V~~~~ 152 (287)
T PRK08223 104 EGIG-KENADAFLDGVDVYVDGLDFF---------EFDARRLVFAACQQRGI-PALTAAP 152 (287)
T ss_pred cccC-ccCHHHHHhCCCEEEECCCCC---------cHHHHHHHHHHHHHcCC-CEEEEec
Confidence 5554 456778888999998654211 11222455677888775 4666554
No 384
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.17 E-value=0.0045 Score=47.43 Aligned_cols=99 Identities=15% Similarity=0.250 Sum_probs=65.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c--------------------c--ccCCC--CeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L--------------------R--DSWAN--NVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~--------------------~--~~~~~--~~~~~~ 106 (200)
....+|+|.|+ |++|..+++.|...|. ++++++.+.-+. . + ....+ +++.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 45679999997 9999999999999997 888888763110 0 0 00112 344444
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
.++ +.+.+.+.++++|+||.+.... ..-..+-+.|.+.++ .+|+.+.
T Consensus 98 ~~i-~~~~~~~~~~~~D~Vi~~~d~~-----------~~r~~l~~~~~~~~i-p~i~~~~ 144 (202)
T TIGR02356 98 ERV-TAENLELLINNVDLVLDCTDNF-----------ATRYLINDACVALGT-PLISAAV 144 (202)
T ss_pred hcC-CHHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence 444 3456778889999999986431 122345667777765 4666664
No 385
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=97.16 E-value=0.0042 Score=50.76 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=39.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
++.+|.|.||+|++|..+++.|.++.+ ++..+..+... |+.+ .+..++++|++|.+..
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------~~~~---~~~~~~~~DvvFlalp 59 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------DAAA---RRELLNAADVAILCLP 59 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------cccC---chhhhcCCCEEEECCC
Confidence 456999999999999999999988874 55555433221 1111 2345567898888764
No 386
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.14 E-value=0.011 Score=48.34 Aligned_cols=104 Identities=15% Similarity=0.135 Sum_probs=67.7
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCccc------cc--CCCCeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~------~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
.++|.|+|+ |.+|..++..|+..|. ++++++.+.+.... .. ......+... .+++ .++++|+|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~-----~dy~-~~~~adiv 75 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD-----KDYS-VTANSKVV 75 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC-----CCHH-HhCCCCEE
Confidence 359999996 9999999999998874 78888887643211 00 0111123221 1233 37899999
Q ss_pred EEccccCCCC----cccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 126 ISCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 126 i~~ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
|.++|....+ ...+..|..-...+.+...+.+.+ .++.+|.
T Consensus 76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence 9999964432 345677777777778888777655 4555543
No 387
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.11 E-value=0.0014 Score=53.97 Aligned_cols=73 Identities=22% Similarity=0.197 Sum_probs=53.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
.+++|+|+|+ |++|...++.+...|++|++++|++++.........-.++. -.|++..+.+-+.+|++|.+++
T Consensus 166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~--~~~~~~~~~~~~~~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVIN--SSDSDALEAVKEIADAIIDTVG 238 (339)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEE--cCCchhhHHhHhhCcEEEECCC
Confidence 4789999998 59999999999999999999999987643222222233333 2356666665556999999987
No 388
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.11 E-value=0.0023 Score=49.11 Aligned_cols=71 Identities=17% Similarity=0.281 Sum_probs=49.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccC-CCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..+++|+|+|| |-+|...++.|++.|++|+++.+...+...... ...+.+..-++. ...+.++|+||-+.+
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaaT~ 79 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAATN 79 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEcCC
Confidence 46889999998 999999999999999999999865433221111 234555443332 234567888887643
No 389
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=97.11 E-value=0.0034 Score=52.83 Aligned_cols=71 Identities=18% Similarity=0.355 Sum_probs=54.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a 129 (200)
..|+|+|+|+ |.+|..+++.+.+.|++|++++.++....... .. .++..|..|.+.+.++.+ ++|.|+...
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~~ 83 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-AH--RSHVIDMLDGDALRAVIEREKPDYIVPEI 83 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh-hh--heEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence 5679999997 78999999999999999999988764421111 11 246678889988888887 789888653
No 390
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.10 E-value=0.02 Score=43.87 Aligned_cols=73 Identities=10% Similarity=0.107 Sum_probs=52.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecC---CCCccc---------------------ccCC-CCeeEEEc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRS---GRSSLR---------------------DSWA-NNVIWHQG 107 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~---------------------~~~~-~~~~~~~~ 107 (200)
...++|+|.|+ |++|..++..|+..|. ++++++.+ .+.... ...+ .+++.+..
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~ 97 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE 97 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 35679999998 9999999999999998 68888877 211000 0001 23555555
Q ss_pred cCCCHHHHHHHhcCCCEEEEc
Q 029008 108 NLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 108 Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
+++ .+.+.++++++|+||-+
T Consensus 98 ~i~-~~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 98 KIT-EENIDKFFKDADIVCEA 117 (200)
T ss_pred eCC-HhHHHHHhcCCCEEEEC
Confidence 664 56678888899999987
No 391
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=97.10 E-value=0.0027 Score=52.45 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=55.2
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
+++|.|.|+ |.+|+-++..-...|++|++++-+++.+... -.-..+.++.+|++.++++.+.+|+|=+
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~---va~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQ---VADRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhh---cccceeecCCCCHHHHHHHHhhCCEEEE
Confidence 478999998 9999999999999999999998776654321 1224566778899999999999999855
No 392
>PLN02928 oxidoreductase family protein
Probab=97.09 E-value=0.0026 Score=52.82 Aligned_cols=79 Identities=16% Similarity=0.117 Sum_probs=53.2
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc---CCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS---WANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
...++++.|.|. |.||+.+++.|...|.+|++.+|......... ....+..+........++++++.++|+|+.+.
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 357899999997 99999999999999999999988633211100 00011111101113457889999999999987
Q ss_pred ccC
Q 029008 130 GGF 132 (200)
Q Consensus 130 g~~ 132 (200)
...
T Consensus 235 Plt 237 (347)
T PLN02928 235 TLT 237 (347)
T ss_pred CCC
Confidence 643
No 393
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.08 E-value=0.0012 Score=53.70 Aligned_cols=74 Identities=26% Similarity=0.214 Sum_probs=48.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCC-HHHHHHHhcCCCEEEEcccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLS-SDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~d~vi~~ag~ 131 (200)
.+.+++|+|++|.+|..+++.+...|.+|+++.++.++...........++ |..+ .+.+.+. .++|++++++|.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g~ 236 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI--DGSKFSEDVKKL-GGADVVIELVGS 236 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE--ecHHHHHHHHhc-cCCCEEEECCCh
Confidence 467999999999999999999999999999988765432111101111222 2211 2223222 279999999875
No 394
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.07 E-value=0.0027 Score=51.18 Aligned_cols=58 Identities=19% Similarity=0.309 Sum_probs=48.4
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
...+++++|+|+++.+|+.++..|.++|+.|+++.++. .++.+.++++|+||...|..
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~p 212 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGKP 212 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCCC
Confidence 35789999999999999999999999999999887641 23567788899999988753
No 395
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.03 E-value=0.00045 Score=46.14 Aligned_cols=67 Identities=27% Similarity=0.271 Sum_probs=44.4
Q ss_pred eEEEEccCchhHHHHHHHHHHCC---CcEEEe-ecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 58 KLLVLGGNGFVGSHICREALDRG---LTVASL-SRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+|.|+|+ |.+|.+|++.|++.| ++|.+. .|++++..+......+.+...| ..++++..|+||.+.-+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~advvilav~p 71 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQEADVVILAVKP 71 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHHTSEEEE-S-G
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCC------hHHhhccCCEEEEEECH
Confidence 5778875 999999999999999 899966 7776543221111223333222 45667789999998654
No 396
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.02 E-value=0.0092 Score=49.84 Aligned_cols=71 Identities=21% Similarity=0.336 Sum_probs=41.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHC-CCc---EEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDR-GLT---VASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~-g~~---V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
|++|.|.||||++|+.+.+.++++ ... +..+.............. -.....++.+++. +.++|++|.+++.
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~~ 75 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQGG 75 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC-CcceEEecCChhH----hcCCCEEEECCCH
Confidence 368999999999999999955554 555 555544322211111111 1122234444432 4679999998864
No 397
>PRK10537 voltage-gated potassium channel; Provisional
Probab=97.02 E-value=0.0035 Score=52.91 Aligned_cols=70 Identities=14% Similarity=0.175 Sum_probs=55.7
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHH-hcCCCEEEEcc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCV 129 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a 129 (200)
..+++|+|. |.+|+.++++|.++|.+|++++.+.. +.....+..++.+|.+|++.++++ +++++.++-+.
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~---~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t 310 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL---EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALR 310 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh---hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence 457999997 89999999999999999998886522 222345678999999999998864 56788888754
No 398
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.01 E-value=0.00036 Score=56.36 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=48.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccc--cC---CCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD--SW---ANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
...++++|.|+ |+.|++++..|...|. +|++++|+.++.... .. ...+.+.. .+++.+.+.++|+||+
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVIn 198 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVH 198 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEE
Confidence 45689999998 8999999999999997 799999986542211 00 11122221 1234456678999999
Q ss_pred cc
Q 029008 128 CV 129 (200)
Q Consensus 128 ~a 129 (200)
+.
T Consensus 199 aT 200 (284)
T PRK12549 199 AT 200 (284)
T ss_pred CC
Confidence 94
No 399
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.01 E-value=0.017 Score=45.47 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=62.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcc----c--------------------ccCCC--CeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL----R--------------------DSWAN--NVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----~--------------------~~~~~--~~~~~~ 106 (200)
....+|+|.|+ |++|..+++.|...|. ++++++.+.-+.. + ....+ +++.+.
T Consensus 22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 35679999998 9999999999999996 7777776532210 0 00012 344444
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..+ +.+.+.++++++|+||.+.... ..-..+-++|.+.++ .+|+.++
T Consensus 101 ~~i-~~~~~~~~~~~~DlVvd~~D~~-----------~~r~~ln~~~~~~~i-p~v~~~~ 147 (240)
T TIGR02355 101 AKL-DDAELAALIAEHDIVVDCTDNV-----------EVRNQLNRQCFAAKV-PLVSGAA 147 (240)
T ss_pred ccC-CHHHHHHHhhcCCEEEEcCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence 434 3456778888999999875431 112345567777765 4555544
No 400
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.01 E-value=0.0026 Score=51.51 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=34.0
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSG 90 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~ 90 (200)
+..+|+|.|+|.+|.+|+.++..|+++|+.|++..+..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence 35789999999999999999999999999999986653
No 401
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.00 E-value=0.0037 Score=50.87 Aligned_cols=100 Identities=13% Similarity=0.141 Sum_probs=66.2
Q ss_pred EEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCccc------ccCC--CCeeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 59 LLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLR------DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~------~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
|.|+|+ |++|..++..|+..| .++++++++.+.... .... ....+... .| .+.++++|+||.+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit 73 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence 468897 899999999999988 689999987654211 0000 12222221 12 3478899999999
Q ss_pred cccCCC----CcccchhhHHHHHHHHHHHHHcCCC-EEEEEe
Q 029008 129 VGGFGS----NSYMYKINGTANINAIRAASEKGVK-RFVYIS 165 (200)
Q Consensus 129 ag~~~~----~~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vS 165 (200)
+|.... ....+..|+.-...+++..++.+.+ .+|.+|
T Consensus 74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 996432 2345667777777888888777655 444444
No 402
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.99 E-value=0.0013 Score=58.71 Aligned_cols=73 Identities=15% Similarity=0.182 Sum_probs=59.2
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA-LDGVTAVISCVG 130 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~ag 130 (200)
.++|+|.|. |.+|+.+++.|.++|+++++++.++++-.. ....+..++.+|.+|++.++++ ++++|.+|-+..
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIET-LRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHH-HHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 468999997 999999999999999999999988765322 1234678999999999988864 567898888753
No 403
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.99 E-value=0.0012 Score=56.59 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=46.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
|+|.|+||.|.+|..+++.|.+.|++|++.+|+.+.........++.+ ..+..+.+.++|+||.+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIlavp 67 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIISVP 67 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEecC
Confidence 479999999999999999999999999999987544211111112211 1123455677888888765
No 404
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.98 E-value=0.0036 Score=51.31 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=55.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCC-CCcccccCCCCee-E--EEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSG-RSSLRDSWANNVI-W--HQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~~~~~~~~~-~--~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
++++|.|.||+|+.|..|.+.|..+.+ ++...+.+. ..........+.. . +....-|++.+ ..+++|+||.+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal 78 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL 78 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEec
Confidence 467999999999999999999998854 665555433 1111111111111 1 22222233333 456799999986
Q ss_pred ccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 130 g~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
.-. ....++......|++ +|=.|.
T Consensus 79 Phg------------~s~~~v~~l~~~g~~-VIDLSa 102 (349)
T COG0002 79 PHG------------VSAELVPELLEAGCK-VIDLSA 102 (349)
T ss_pred Cch------------hHHHHHHHHHhCCCe-EEECCc
Confidence 421 012345555555664 777776
No 405
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.98 E-value=0.0013 Score=55.91 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=51.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccCC-CCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWA-NNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++++|.|+ |.+|+.+++.|...|. ++++..|+.++....... .... +...+++...+..+|+||++.+.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~-----~~~~~~l~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS-----AHYLSELPQLIKKADIIIAAVNV 252 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe-----EecHHHHHHHhccCCEEEECcCC
Confidence 56789999998 9999999999999995 788888875542111100 1122 22335667888899999999875
No 406
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.98 E-value=0.0026 Score=48.88 Aligned_cols=71 Identities=23% Similarity=0.301 Sum_probs=52.9
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccccc-CCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDS-WANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..+++++|+|| |.+|..-++.|++.|++|++++.......... ...+++++..++.. ..+++++.||-+.+
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-----~dl~~~~lVi~at~ 78 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-----DILEGAFLVIAATD 78 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-----HHhCCcEEEEECCC
Confidence 46789999998 99999999999999999999987654322211 23478888888752 23567888877543
No 407
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.98 E-value=0.018 Score=47.78 Aligned_cols=69 Identities=20% Similarity=0.298 Sum_probs=41.7
Q ss_pred CCeEEEEccCchhHHHHHHHHHH-CCCc---EEEeecCCCCcc-cccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALD-RGLT---VASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..+|.|.||||++|+.+++.|.+ ...+ +..+......-. .........+... |++ .+.++|++|.+++
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~---~~~----~~~~~Divf~a~~ 77 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEA---KIN----SFEGVDIAFFSAG 77 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeC---CHH----HhcCCCEEEECCC
Confidence 46899999999999999999995 4555 544543322111 1111112233222 333 2467999999876
Q ss_pred c
Q 029008 131 G 131 (200)
Q Consensus 131 ~ 131 (200)
.
T Consensus 78 ~ 78 (347)
T PRK06728 78 G 78 (347)
T ss_pred h
Confidence 4
No 408
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.98 E-value=0.00087 Score=54.09 Aligned_cols=75 Identities=13% Similarity=0.066 Sum_probs=49.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccc--cCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD--SWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..+++++|.|+ |+.|++++..|.+.|. +|+++.|+.++.... .......+.. +...+++...+.++|+|||+..
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECCC
Confidence 35789999997 9999999999999997 799999886543211 0011111111 1112334556678999999976
Q ss_pred c
Q 029008 131 G 131 (200)
Q Consensus 131 ~ 131 (200)
.
T Consensus 200 ~ 200 (282)
T TIGR01809 200 A 200 (282)
T ss_pred C
Confidence 4
No 409
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.98 E-value=0.0014 Score=53.03 Aligned_cols=75 Identities=17% Similarity=0.157 Sum_probs=56.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
.++++.|+|+.| +|.--++...+.|++|+++++...+..+....-+.+++..-..|++.++++.+..|.++|++.
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~ 255 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVS 255 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeee
Confidence 578999999976 999999999999999999999865533333333555554333488888888887777777765
No 410
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.96 E-value=0.0024 Score=54.33 Aligned_cols=68 Identities=16% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++++|+|. |.+|+.+++.|...|.+|++.++++.+..+.. ..++++. + ++++++++|+||.+.|.
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~v~-----~---l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFRVM-----T---MEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCEec-----C---HHHHHhCCCEEEECCCC
Confidence 46889999997 99999999999999999999988765532211 1122221 1 34566788888887763
No 411
>PRK08328 hypothetical protein; Provisional
Probab=96.94 E-value=0.021 Score=44.66 Aligned_cols=98 Identities=20% Similarity=0.270 Sum_probs=62.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcc--------------------------cccCC-CCeeEEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL--------------------------RDSWA-NNVIWHQ 106 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------------------~~~~~-~~~~~~~ 106 (200)
...+|+|.|+ |++|.++++.|...|. ++++++.+.-+.. ....+ -.++.+.
T Consensus 26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~ 104 (231)
T PRK08328 26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV 104 (231)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence 5679999998 9999999999999996 6777775431100 00011 1344445
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..+ +++.+.++++++|+||.+.... ..-..+-++|.+.++ .+|+.+.
T Consensus 105 ~~~-~~~~~~~~l~~~D~Vid~~d~~-----------~~r~~l~~~~~~~~i-p~i~g~~ 151 (231)
T PRK08328 105 GRL-SEENIDEVLKGVDVIVDCLDNF-----------ETRYLLDDYAHKKGI-PLVHGAV 151 (231)
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEee
Confidence 444 4555777888899998875331 112334566777765 4666554
No 412
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.93 E-value=0.012 Score=49.17 Aligned_cols=99 Identities=17% Similarity=0.135 Sum_probs=64.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc----cc---------------------ccCC-CCeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS----LR---------------------DSWA-NNVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~----~~---------------------~~~~-~~~~~~~ 106 (200)
....+|+|.|+ |++|..+++.|+..|. ++++++.+.-.. .+ ...+ -+++.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 35679999998 9999999999999996 777777653110 00 0111 2455555
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..++ .+...++++++|+||.+...+ ..-..+-++|.+.++ .+|+.+.
T Consensus 105 ~~i~-~~~~~~~~~~~DvVvd~~d~~-----------~~r~~~n~~c~~~~i-p~v~~~~ 151 (355)
T PRK05597 105 RRLT-WSNALDELRDADVILDGSDNF-----------DTRHLASWAAARLGI-PHVWASI 151 (355)
T ss_pred eecC-HHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEEE
Confidence 5654 456677888999999986421 122335567777765 4666654
No 413
>PLN02602 lactate dehydrogenase
Probab=96.93 E-value=0.021 Score=47.46 Aligned_cols=102 Identities=16% Similarity=0.133 Sum_probs=67.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCCccc------cc--CCCCeeEEEccCCCHHHHHHHhcCCCEEE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------DS--WANNVIWHQGNLLSSDSWKEALDGVTAVI 126 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~------~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 126 (200)
++|.|+|+ |.+|..++..|+..|. ++.+++.+.+.... .. ......+... .| + +.++++|+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d---y-~~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS--TD---Y-AVTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC--CC---H-HHhCCCCEEE
Confidence 69999996 9999999999998874 78888887644211 00 0112222211 12 3 3488999999
Q ss_pred EccccCCCC----cccchhhHHHHHHHHHHHHHcCCC-EEEEEe
Q 029008 127 SCVGGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYIS 165 (200)
Q Consensus 127 ~~ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vS 165 (200)
.+||....+ ...+..|..-...+++...+.+.+ .+|.+|
T Consensus 111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999975322 345667777777778888777655 455555
No 414
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.92 E-value=0.0017 Score=55.28 Aligned_cols=72 Identities=19% Similarity=0.191 Sum_probs=51.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++++|+|+ |.+|..+++.|...| .+|++.+|+.++.......-+...+ +.+++.+.+.++|+||.+.+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~aT~s 250 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISSTGA 250 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEECCCC
Confidence 46789999997 999999999999999 6899999886542211111111222 234567778899999999764
No 415
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.90 E-value=0.0015 Score=52.30 Aligned_cols=70 Identities=14% Similarity=0.257 Sum_probs=47.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--ccCC--CCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--DSWA--NNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
..+++++|+|+ |++|++++..|++.|++|++.+|+.++..+ .... ..+... ++.+ ..+.++|+||++.
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInat 186 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINAT 186 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECC
Confidence 45689999998 899999999999999999999887544211 0000 112222 1111 1245799999998
Q ss_pred cc
Q 029008 130 GG 131 (200)
Q Consensus 130 g~ 131 (200)
+.
T Consensus 187 p~ 188 (270)
T TIGR00507 187 SA 188 (270)
T ss_pred CC
Confidence 74
No 416
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.90 E-value=0.0056 Score=45.04 Aligned_cols=68 Identities=13% Similarity=0.297 Sum_probs=45.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
..+++|+|.|| |-+|...++.|++.|++|++++......... ...+.+..-.+. + .-+++.|.||-+.
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~~~~l~~--l~~i~~~~~~~~-~----~dl~~a~lViaaT 78 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEICKEMKE--LPYITWKQKTFS-N----DDIKDAHLIYAAT 78 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCccCHHHHh--ccCcEEEecccC-h----hcCCCceEEEECC
Confidence 47899999998 9999999999999999999985332221111 123444433332 2 2356778887753
No 417
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.90 E-value=0.0035 Score=51.15 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=32.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
++++|.|.|+ |.+|.++++.|.+.|++|.+.+|+...
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~~ 39 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSGL 39 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 4568999997 999999999999999999999887543
No 418
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.89 E-value=0.031 Score=40.18 Aligned_cols=95 Identities=20% Similarity=0.253 Sum_probs=61.2
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcc----------c---------------ccC-CCCeeEEEccCC
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL----------R---------------DSW-ANNVIWHQGNLL 110 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------~---------------~~~-~~~~~~~~~Dl~ 110 (200)
+|+|.|+ |++|..+++.|...|. ++++++.+.-... . ... .-+++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899997 9999999999999997 6888876531100 0 001 123445555554
Q ss_pred CHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 111 d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+. ...+.++++|+||.+.... .....+.+.|++.++ .+|..++
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~~-----------~~~~~l~~~~~~~~i-~~i~~~~ 122 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDNI-----------AVRRALNRACKELGI-PVIDAGG 122 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEcC
Confidence 33 3467778899999876431 223456778888765 4665555
No 419
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.87 E-value=0.016 Score=48.75 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=66.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC-c----EEE----eecCCCCccc------c---cCCCCeeEEEccCCCHHHHHH
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL-T----VAS----LSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~-~----V~~----~~r~~~~~~~------~---~~~~~~~~~~~Dl~d~~~~~~ 117 (200)
.-+|.|+|++|.+|..++..|..+|. . |.+ ++++.+.... . ....++.+...| .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~-------y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP-------YE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC-------HH
Confidence 46999999999999999999998874 2 333 2555443111 0 001122222211 46
Q ss_pred HhcCCCEEEEccccCCCC----cccchhhHHHHHHHHHHHHHcC-CC-EEEEEec
Q 029008 118 ALDGVTAVISCVGGFGSN----SYMYKINGTANINAIRAASEKG-VK-RFVYISA 166 (200)
Q Consensus 118 ~~~~~d~vi~~ag~~~~~----~~~~~~n~~~~~~~~~~a~~~~-~~-~~v~vSS 166 (200)
.++++|+||.+||....+ ...+..|+.-...+.+...++. .. .+|.+|.
T Consensus 117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 788999999999975422 3456778888888888887743 44 4555553
No 420
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.87 E-value=0.013 Score=50.13 Aligned_cols=104 Identities=6% Similarity=-0.006 Sum_probs=67.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHC---CC----cEEEeecCCCCc-cc-------c---cCCCCeeEEEccCCCHHHHHH
Q 029008 56 SEKLLVLGGNGFVGSHICREALDR---GL----TVASLSRSGRSS-LR-------D---SWANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~---g~----~V~~~~r~~~~~-~~-------~---~~~~~~~~~~~Dl~d~~~~~~ 117 (200)
.-+|+||||+|.||.+|+-.+++- |. .+++++...... .+ . .....+.+.. | -.+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~------~~e 195 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D------LDV 195 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C------CHH
Confidence 468999999999999999998873 32 345555531111 10 0 0112233332 2 256
Q ss_pred HhcCCCEEEEccccCCC----CcccchhhHHHHHHHHHHHHHcCC--CEEEEEec
Q 029008 118 ALDGVTAVISCVGGFGS----NSYMYKINGTANINAIRAASEKGV--KRFVYISA 166 (200)
Q Consensus 118 ~~~~~d~vi~~ag~~~~----~~~~~~~n~~~~~~~~~~a~~~~~--~~~v~vSS 166 (200)
.++++|+||.++|.... ....++.|..-.....++..+.+. .+++.+.|
T Consensus 196 a~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 196 AFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 78899999999996432 234667788777788888877766 56666664
No 421
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.86 E-value=0.017 Score=45.63 Aligned_cols=99 Identities=18% Similarity=0.148 Sum_probs=63.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c-----------------------cccCC-CCeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L-----------------------RDSWA-NNVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~-----------------------~~~~~-~~~~~~~ 106 (200)
....+|+|.|+ |++|..+++.|+..|. ++++++.+.-.. . ....+ .+++.+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 45679999998 9999999999999996 777776542110 0 00011 2455555
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..++ ++.+.+.++++|+||.+.... ..-..+-++|.+.++ .+|+.+.
T Consensus 109 ~~i~-~~~~~~~~~~~DiVi~~~D~~-----------~~r~~ln~~~~~~~i-p~v~~~~ 155 (245)
T PRK05690 109 ARLD-DDELAALIAGHDLVLDCTDNV-----------ATRNQLNRACFAAKK-PLVSGAA 155 (245)
T ss_pred ccCC-HHHHHHHHhcCCEEEecCCCH-----------HHHHHHHHHHHHhCC-EEEEeee
Confidence 5553 556778889999999985321 112345566777664 4665443
No 422
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.85 E-value=0.0081 Score=49.65 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=41.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC---cEEEeecCCCCcccccCCC-CeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL---TVASLSRSGRSSLRDSWAN-NVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
+..+|.|.||||++|..+++.|.++.| ++..+..+.+.-....... ...+- |+ + +..+.++|++|.+++
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~--~~---~--~~~~~~~Dvvf~a~p 75 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQ--DA---A--EFDWSQAQLAFFVAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEE--eC---c--hhhccCCCEEEECCC
Confidence 456999999999999999999998644 5555544322211110111 11111 22 1 123467899999875
Q ss_pred c
Q 029008 131 G 131 (200)
Q Consensus 131 ~ 131 (200)
.
T Consensus 76 ~ 76 (336)
T PRK08040 76 R 76 (336)
T ss_pred H
Confidence 4
No 423
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=96.85 E-value=0.0093 Score=48.39 Aligned_cols=97 Identities=25% Similarity=0.200 Sum_probs=60.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHH---h--cCCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEA---L--DGVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~--~~~d~vi~~a 129 (200)
.+.+++|+|+++.+|..+++.+...|++|++++++..+..... ..... ...|..+.+..+.+ . .++|.+++++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 243 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGAD-YVIDYRKEDFVREVRELTGKRGVDVVVEHV 243 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC-eEEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence 4679999999999999999999999999999887654321111 01111 12355554433332 2 2589999998
Q ss_pred ccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc
Q 029008 130 GGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167 (200)
Q Consensus 130 g~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~ 167 (200)
|... ....++.++.. ++++.+++.
T Consensus 244 g~~~------------~~~~~~~l~~~--G~~v~~~~~ 267 (342)
T cd08266 244 GAAT------------WEKSLKSLARG--GRLVTCGAT 267 (342)
T ss_pred cHHH------------HHHHHHHhhcC--CEEEEEecC
Confidence 7410 11233444332 578888764
No 424
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.85 E-value=0.016 Score=49.67 Aligned_cols=73 Identities=18% Similarity=0.184 Sum_probs=51.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCc-ccccC--CCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSS-LRDSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
.+++|+|+|. |..|.++++.|.++|++|.+.+...... ..... ..++.++.+... ...+.++|.||...|.
T Consensus 4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~-----~~~~~~~d~vv~spgi 77 (445)
T PRK04308 4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLK-----DALDNGFDILALSPGI 77 (445)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCC-----HHHHhCCCEEEECCCC
Confidence 4679999998 7999999999999999999988765432 11111 135666554422 1244679999999887
Q ss_pred CC
Q 029008 132 FG 133 (200)
Q Consensus 132 ~~ 133 (200)
..
T Consensus 78 ~~ 79 (445)
T PRK04308 78 SE 79 (445)
T ss_pred CC
Confidence 53
No 425
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.85 E-value=0.01 Score=48.37 Aligned_cols=56 Identities=20% Similarity=0.311 Sum_probs=37.8
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
.+|.|.|++|+.|..+++.|....+ ++..+.-+.. .+ +.+.+++++++|++|.+.+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~---------------~~---~~~~~~~~~~~D~vFlalp 58 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR---------------KD---AAERAKLLNAADVAILCLP 58 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc---------------cC---cCCHhHhhcCCCEEEECCC
Confidence 3799999999999999999998754 5555543211 01 1123355567888887764
No 426
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.85 E-value=0.017 Score=44.63 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=62.0
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--cc----------------------ccCC-CCeeEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--LR----------------------DSWA-NNVIWHQGN 108 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~----------------------~~~~-~~~~~~~~D 108 (200)
...+|+|.|+ |++|..+++.|...|. ++++++.+.-.. .. ...+ .+++.+...
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~ 105 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK 105 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence 5679999997 9999999999999997 588887762110 00 0011 234455555
Q ss_pred CCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHc-CCCEEEEEec
Q 029008 109 LLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEK-GVKRFVYISA 166 (200)
Q Consensus 109 l~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS 166 (200)
++ .+.+.+.++++|+||.|... + ..-..+.+.|.+. ++ .+|+.+.
T Consensus 106 i~-~~~~~~~~~~~DvVI~a~D~---~--------~~r~~l~~~~~~~~~~-p~I~~~~ 151 (212)
T PRK08644 106 ID-EDNIEELFKDCDIVVEAFDN---A--------ETKAMLVETVLEHPGK-KLVAASG 151 (212)
T ss_pred cC-HHHHHHHHcCCCEEEECCCC---H--------HHHHHHHHHHHHhCCC-CEEEeeh
Confidence 54 35567788899999987421 1 1223455666666 54 5666543
No 427
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.83 E-value=0.011 Score=49.61 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=63.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCC------------------ccc-------ccCC-CCeeEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------------------SLR-------DSWA-NNVIWHQG 107 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~-------~~~~-~~~~~~~~ 107 (200)
..++|+|.|+ |++|..+++.|+..|. ++++++++.-. ..+ ...+ .+++.+..
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 4568999987 9999999999999997 78888876210 000 0011 13444444
Q ss_pred cCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 108 Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
.+ +.+.+.++++++|+||.+.... ..-..+-++|.+.++ .+|+.+.
T Consensus 213 ~~-~~~~~~~~~~~~D~Vv~~~d~~-----------~~r~~ln~~~~~~~i-p~i~~~~ 258 (376)
T PRK08762 213 RV-TSDNVEALLQDVDVVVDGADNF-----------PTRYLLNDACVKLGK-PLVYGAV 258 (376)
T ss_pred cC-ChHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEEe
Confidence 44 3456778888999999986432 111235667777775 5666654
No 428
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.82 E-value=0.0025 Score=54.36 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=51.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++++|+|+ |.+|..+++.|...|. +|++.+|+.++.......-+. ++.+.+++.+.+.++|+||.+.+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG-----EAIPLDELPEALAEADIVISSTGA 252 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-----cEeeHHHHHHHhccCCEEEECCCC
Confidence 46789999997 9999999999999997 788888876542211100111 222335566778899999999765
No 429
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.82 E-value=0.0056 Score=50.25 Aligned_cols=64 Identities=23% Similarity=0.173 Sum_probs=48.9
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
...++++.|.|- |.||+.+++.|..-|.+|++.+|..... .. +..+++++++..|+|+.+....
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~-------~~--------~~~~l~ell~~sDiv~l~lPlt 208 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPA-------RP--------DRLPLDELLPQVDALTLHCPLT 208 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcc-------cc--------cccCHHHHHHhCCEEEECCCCC
Confidence 357899999997 9999999999999999999887752210 11 1225788999999998877643
No 430
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.82 E-value=0.0019 Score=49.45 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=29.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
||++.|.| +|.+|..++++|.+.||+|++..|+.++
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~ 36 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPK 36 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChh
Confidence 35566665 6999999999999999999999777654
No 431
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.82 E-value=0.0042 Score=46.46 Aligned_cols=70 Identities=13% Similarity=0.096 Sum_probs=48.7
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCC---Ccc---------------------cccCC-CCeeEEEccCCC
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGR---SSL---------------------RDSWA-NNVIWHQGNLLS 111 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~---------------------~~~~~-~~~~~~~~Dl~d 111 (200)
+|+|.|+ |++|..+++.|...|. ++++++.+.- ... ....+ .+++.+...+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~- 78 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID- 78 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence 5899997 9999999999999998 5888887641 100 00011 24555555553
Q ss_pred HHHHHHHhcCCCEEEEcc
Q 029008 112 SDSWKEALDGVTAVISCV 129 (200)
Q Consensus 112 ~~~~~~~~~~~d~vi~~a 129 (200)
.+.+.+.++++|+||.+.
T Consensus 79 ~~~~~~~l~~~DlVi~~~ 96 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAF 96 (174)
T ss_pred hhhHHHHhcCCCEEEECC
Confidence 456778888999999874
No 432
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.81 E-value=0.016 Score=50.23 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=51.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc----cccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL----RDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
..+++|+|+|+ |++|..+++.|.++|++|++++++..... ......+++++.++-.. ...++|.||...
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~ 86 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTSP 86 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECC
Confidence 35679999997 99999999999999999999986643211 11223466666554221 345689999988
Q ss_pred ccC
Q 029008 130 GGF 132 (200)
Q Consensus 130 g~~ 132 (200)
|..
T Consensus 87 Gi~ 89 (480)
T PRK01438 87 GWR 89 (480)
T ss_pred CcC
Confidence 864
No 433
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=96.80 E-value=0.0069 Score=50.72 Aligned_cols=68 Identities=21% Similarity=0.338 Sum_probs=52.8
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEcc
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCV 129 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a 129 (200)
+|+|.|+ |.+|..+++.+.+.|++|++++.++....... .+ ..+..|..|++.+.++.+ ++|+|+...
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~-ad--~~~~~~~~d~~~l~~~~~~~~id~v~~~~ 70 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-AH--RSYVINMLDGDALRAVIEREKPDYIVPEI 70 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh-Cc--eEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence 5899996 99999999999999999999998765432211 11 345678889999988887 699988654
No 434
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.78 E-value=0.0019 Score=52.89 Aligned_cols=74 Identities=20% Similarity=0.202 Sum_probs=51.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
..+++|+|.|+ |.+|..+++.|...| .+|++++|+.++..+....-+..+ .+.+++.+.+.++|+||.+.+..
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~-----~~~~~~~~~l~~aDvVi~at~~~ 249 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA-----VPLDELLELLNEADVVISATGAP 249 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE-----EeHHHHHHHHhcCCEEEECCCCC
Confidence 46789999997 999999999999876 578888887654221111111222 23345677788899999998764
Q ss_pred C
Q 029008 133 G 133 (200)
Q Consensus 133 ~ 133 (200)
.
T Consensus 250 ~ 250 (311)
T cd05213 250 H 250 (311)
T ss_pred c
Confidence 3
No 435
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.78 E-value=0.011 Score=50.37 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=32.5
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
+++|.|+|. |++|..++..|++.|++|++.+++++.
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~ 38 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHA 38 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence 368999996 999999999999999999999988654
No 436
>PLN02256 arogenate dehydrogenase
Probab=96.75 E-value=0.0038 Score=50.94 Aligned_cols=69 Identities=20% Similarity=0.262 Sum_probs=46.5
Q ss_pred CCCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHh-cCCCEEEEccc
Q 029008 52 PPPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEAL-DGVTAVISCVG 130 (200)
Q Consensus 52 ~~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~vi~~ag 130 (200)
.+..+++|.|+|. |.+|..+++.|.+.|++|++.+++..... ....++.. ..+ .++++ .++|+||.+..
T Consensus 32 ~~~~~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~~~~~--a~~~gv~~----~~~---~~e~~~~~aDvVilavp 101 (304)
T PLN02256 32 EKSRKLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSDYSDI--AAELGVSF----FRD---PDDFCEEHPDVVLLCTS 101 (304)
T ss_pred ccCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECccHHHH--HHHcCCee----eCC---HHHHhhCCCCEEEEecC
Confidence 3456789999995 99999999999999999999988753211 11112221 223 23333 46899998865
No 437
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.74 E-value=0.0059 Score=49.52 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=32.3
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEee
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLS 87 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~ 87 (200)
+..+|+|+|+|.++.+|..++..|+++|+.|++..
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~ 189 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH 189 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence 35789999999999999999999999999999884
No 438
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.74 E-value=0.0053 Score=52.75 Aligned_cols=69 Identities=13% Similarity=0.153 Sum_probs=50.1
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
...+++++|+|. |.+|+.+++.|...|.+|++..+++....+.. ..++++. .++++++.+|+||.+.|.
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~--------~leell~~ADIVI~atGt 319 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV--------TLEDVVETADIFVTATGN 319 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec--------cHHHHHhcCCEEEECCCc
Confidence 357899999997 89999999999999999999887755432111 1233222 245677889999988763
No 439
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.74 E-value=0.017 Score=47.97 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=27.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCC-CcEEEeecC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRG-LTVASLSRS 89 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~ 89 (200)
++|.|+|++|++|+.+++.|..++ .++..+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 479999999999999999998876 477777433
No 440
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.73 E-value=0.0089 Score=43.09 Aligned_cols=58 Identities=21% Similarity=0.189 Sum_probs=47.7
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
+..+++|.|.|.+.-+|..++..|.++|..|....++.. ++++..+++|+||-..|..
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~----------------------~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI----------------------QLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc----------------------CHHHHHhhCCEEEEecCCC
Confidence 467899999999999999999999999999988765421 2456778889998887753
No 441
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.72 E-value=0.00064 Score=50.25 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=30.3
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
|++|.++|- |-+|..+++.|++.|++|++.+|++++
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~ 36 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEK 36 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhh
Confidence 579999997 999999999999999999999988544
No 442
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.69 E-value=0.0038 Score=51.43 Aligned_cols=73 Identities=29% Similarity=0.262 Sum_probs=48.3
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCe-eEEEccCCCH---HHHHHHhc--CCCEEEEcc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNV-IWHQGNLLSS---DSWKEALD--GVTAVISCV 129 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~Dl~d~---~~~~~~~~--~~d~vi~~a 129 (200)
+.++||+||+|++|...++.+...|+.++++..+.++.. ....... .++ |..+. +.+.++.. ++|+|+.+.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi--~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVI--NYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEE--cCCcccHHHHHHHHcCCCCceEEEECC
Confidence 789999999999999999999999977666666544322 1111121 222 23333 33444443 589999998
Q ss_pred cc
Q 029008 130 GG 131 (200)
Q Consensus 130 g~ 131 (200)
|.
T Consensus 220 G~ 221 (326)
T COG0604 220 GG 221 (326)
T ss_pred CH
Confidence 85
No 443
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.69 E-value=0.0033 Score=51.64 Aligned_cols=76 Identities=20% Similarity=0.130 Sum_probs=48.2
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCH----HHHHHHh-cCCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS----DSWKEAL-DGVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~-~~~d~vi~~a 129 (200)
.+.+++|+|++|.+|..+++.+...|.+|++++++.++.......-++..+ .|..+. +.+.+.. .++|+++.+.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~~ 229 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDNV 229 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEECC
Confidence 467999999999999999999999999999888775442111100122111 222221 2223322 3689999987
Q ss_pred cc
Q 029008 130 GG 131 (200)
Q Consensus 130 g~ 131 (200)
|.
T Consensus 230 g~ 231 (338)
T cd08295 230 GG 231 (338)
T ss_pred CH
Confidence 74
No 444
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.69 E-value=0.0025 Score=49.45 Aligned_cols=36 Identities=28% Similarity=0.299 Sum_probs=32.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
|+|.|+||+|.+|..++..|.+.|++|.+.+|++++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~ 36 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK 36 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence 479999988999999999999999999999887644
No 445
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.68 E-value=0.023 Score=48.27 Aligned_cols=75 Identities=20% Similarity=0.271 Sum_probs=47.4
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCC------CCee-----EE-EccCCCHHHHHHHhcCCCE
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWA------NNVI-----WH-QGNLLSSDSWKEALDGVTA 124 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~-----~~-~~Dl~d~~~~~~~~~~~d~ 124 (200)
++|.|+|. |++|..++..|++.|++|++.+++.++....... .+++ .+ .+.+.-..++.++++++|+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 37899996 9999999999999999999999876542110000 0000 00 0001111234556788999
Q ss_pred EEEccccC
Q 029008 125 VISCVGGF 132 (200)
Q Consensus 125 vi~~ag~~ 132 (200)
||-+.+..
T Consensus 80 vii~vpt~ 87 (411)
T TIGR03026 80 IIICVPTP 87 (411)
T ss_pred EEEEeCCC
Confidence 99998753
No 446
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=96.67 E-value=0.0083 Score=51.89 Aligned_cols=110 Identities=15% Similarity=0.076 Sum_probs=60.9
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCC--CcEEEeecCCCCcccccCCCCeeEEE-----------c-cCCCHHHHHHHhcC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRG--LTVASLSRSGRSSLRDSWANNVIWHQ-----------G-NLLSSDSWKEALDG 121 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~-----------~-Dl~d~~~~~~~~~~ 121 (200)
+|+|.|.|. |++|..++-.|++.| ++|++++.++++-.. .......+.. . .+.-..++.+++++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~-l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ 78 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDA-WNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE 78 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHH-HHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence 468999986 999999999999985 789999987644111 0000000000 0 01111223556778
Q ss_pred CCEEEEccccCCCCc---ccchhhHHHHHHHHHHHHHc-CCCEEEEEecc
Q 029008 122 VTAVISCVGGFGSNS---YMYKINGTANINAIRAASEK-GVKRFVYISAA 167 (200)
Q Consensus 122 ~d~vi~~ag~~~~~~---~~~~~n~~~~~~~~~~a~~~-~~~~~v~vSS~ 167 (200)
+|++|-|.+.....+ .....+.......++...+. ....+|.+.|.
T Consensus 79 advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~ST 128 (473)
T PLN02353 79 ADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST 128 (473)
T ss_pred CCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCC
Confidence 999999988433211 11233444444444444332 22356665553
No 447
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.66 E-value=0.011 Score=48.51 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=51.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..++++.|.|- |.||+.+++.|...|.+|++.++..+.. ..+..+ ...++++++++++|+|+.+...
T Consensus 134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~------~~~~~~----~~~~~l~e~l~~aDvvv~~lPl 200 (312)
T PRK15469 134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW------PGVQSF----AGREELSAFLSQTRVLINLLPN 200 (312)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC------CCceee----cccccHHHHHhcCCEEEECCCC
Confidence 46789999996 9999999999999999999988754331 111111 1345688999999999998764
No 448
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.66 E-value=0.0016 Score=47.89 Aligned_cols=68 Identities=21% Similarity=0.283 Sum_probs=45.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+|+++|+|- |.+|+.+++.|...|.+|++...++-+..+.. ..++++. .+++++...|++|.+.|.
T Consensus 21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~--------~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM--------TLEEALRDADIFVTATGN 88 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE---------HHHHTTT-SEEEE-SSS
T ss_pred eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec--------CHHHHHhhCCEEEECCCC
Confidence 56899999997 99999999999999999999998765533211 2344433 245677788888887764
No 449
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.66 E-value=0.012 Score=43.42 Aligned_cols=57 Identities=25% Similarity=0.355 Sum_probs=41.6
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+..+|+++|.|.+..+|+.++..|.++|+.|+...... .++++..+..|+||-.+|.
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------~~l~~~~~~ADIVVsa~G~ 89 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------KNLQEITRRADIVVSAVGK 89 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------SSHHHHHTTSSEEEE-SSS
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------CcccceeeeccEEeeeecc
Confidence 36789999999999999999999999999998865542 1245666778888887774
No 450
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.66 E-value=0.028 Score=48.14 Aligned_cols=105 Identities=10% Similarity=0.015 Sum_probs=62.0
Q ss_pred EEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCCCCcccc
Q 029008 60 LVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFGSNSYMY 139 (200)
Q Consensus 60 lVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~ 139 (200)
+|+||+|.+|.++++.|...|++|+...+...+... ....++..+..|.+..++.+++.
T Consensus 42 ~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~l~-------------------- 100 (450)
T PRK08261 42 VLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-GWGDRFGALVFDATGITDPADLK-------------------- 100 (450)
T ss_pred eEEccCchhHHHHHHHHhhCCCeeeecCcccccccc-CcCCcccEEEEECCCCCCHHHHH--------------------
Confidence 388888999999999999999999987655432111 11223443334544433322211
Q ss_pred hhhHHHHHHHHHHHHHc--CCCEEEEEeccccCcCCcCCcchhhhHHhhHHHHHhh
Q 029008 140 KINGTANINAIRAASEK--GVKRFVYISAADFGVANYLLQGYYEGKDSNLSPLLAC 193 (200)
Q Consensus 140 ~~n~~~~~~~~~~a~~~--~~~~~v~vSS~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 193 (200)
+...+++++.+. ...+||++++..... ....|+.+|++++.+++..
T Consensus 101 -----~~~~~~~~~l~~l~~~griv~i~s~~~~~---~~~~~~~akaal~gl~rsl 148 (450)
T PRK08261 101 -----ALYEFFHPVLRSLAPCGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSL 148 (450)
T ss_pred -----HHHHHHHHHHHhccCCCEEEEEccccccC---CchHHHHHHHHHHHHHHHH
Confidence 111222222221 235899999853221 2235999999999988863
No 451
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.65 E-value=0.015 Score=47.78 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=48.6
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----------ccCCCCe--eEEEccCCCHHHHHHHhcCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----------DSWANNV--IWHQGNLLSSDSWKEALDGV 122 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~--~~~~~Dl~d~~~~~~~~~~~ 122 (200)
..++|.|+|+ |-+|..++..|+..|++|++.+++++.... .....+. ......+.-..++++++.++
T Consensus 6 ~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 6 DIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 3468999997 999999999999999999999987543110 0000000 00001111123466788899
Q ss_pred CEEEEccc
Q 029008 123 TAVISCVG 130 (200)
Q Consensus 123 d~vi~~ag 130 (200)
|.|+-++.
T Consensus 85 DlViEavp 92 (321)
T PRK07066 85 DFIQESAP 92 (321)
T ss_pred CEEEECCc
Confidence 99999753
No 452
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.65 E-value=0.0085 Score=47.71 Aligned_cols=67 Identities=21% Similarity=0.140 Sum_probs=43.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCC---CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRG---LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
||++|.|+|+ |.+|..++..|.+.| ++|.+.+|+.+........-++.+ . .+..++++.+|+||-+.
T Consensus 1 ~mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~advVil~v 70 (267)
T PRK11880 1 MMKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEADVVVLAV 70 (267)
T ss_pred CCCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCCEEEEEc
Confidence 4678999997 999999999999998 788888887543211110012211 1 12234456778888765
No 453
>PRK07574 formate dehydrogenase; Provisional
Probab=96.65 E-value=0.0057 Score=51.48 Aligned_cols=69 Identities=10% Similarity=0.021 Sum_probs=50.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++|.|+|. |.||+.+++.|...|.+|++.+|........ ...++. -..+++++++.+|+|+.+...
T Consensus 190 L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~~~g~~-------~~~~l~ell~~aDvV~l~lPl 258 (385)
T PRK07574 190 LEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-QELGLT-------YHVSFDSLVSVCDVVTIHCPL 258 (385)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhH-hhcCce-------ecCCHHHHhhcCCEEEEcCCC
Confidence 56789999997 9999999999999999999998875321110 001111 123477889999999888764
No 454
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=48.15 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=49.6
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
...++++.|.|- |.||+.+++.|...|.+|++.+|..... ++... ..+++++++++|+|+.+....
T Consensus 119 ~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~-------~~~~~------~~~l~ell~~aDiv~~~lp~t 184 (303)
T PRK06436 119 LLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVND-------GISSI------YMEPEDIMKKSDFVLISLPLT 184 (303)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCccc-------Ccccc------cCCHHHHHhhCCEEEECCCCC
Confidence 357899999996 9999999999888899999998863221 11100 124678888999999887643
No 455
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.64 E-value=0.0029 Score=53.38 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=55.4
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
...++++|+|+ |-+|.-++++|.+.| .+|+++.|..++..+....-+ +++...+.+...+..+|+||.+.|..
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----~~~~~l~el~~~l~~~DvVissTsa~ 249 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----AEAVALEELLEALAEADVVISSTSAP 249 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----CeeecHHHHHHhhhhCCEEEEecCCC
Confidence 47889999998 999999999999999 588888887665332111112 44555677888899999999987653
No 456
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.64 E-value=0.01 Score=48.83 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=50.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
..+|++.|+|. |-||+.+++.|..-|.+|++.++...+.... .. ...-.+++++++...|+|+...-..
T Consensus 140 l~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~----~~-----~~~~~~~Ld~lL~~sDiv~lh~PlT 208 (324)
T COG0111 140 LAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAG----VD-----GVVGVDSLDELLAEADILTLHLPLT 208 (324)
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhc----cc-----cceecccHHHHHhhCCEEEEcCCCC
Confidence 46899999997 9999999999999999999999844332110 00 0112345788888889888776543
No 457
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.62 E-value=0.0062 Score=51.66 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=49.2
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++|+|+|+ |.+|..+++.+...|.+|+++++++.+.... ...++..+ + +++++.++|+||.+.|.
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~-----~---~~e~v~~aDVVI~atG~ 267 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVM-----T---MEEAVKEGDIFVTTTGN 267 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEc-----c---HHHHHcCCCEEEECCCC
Confidence 46889999998 9999999999999999999988876553221 11233322 1 23456788999988764
No 458
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.61 E-value=0.039 Score=45.15 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=61.1
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcc----c---------------------ccCC-CCeeEEEccCC
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL----R---------------------DSWA-NNVIWHQGNLL 110 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----~---------------------~~~~-~~~~~~~~Dl~ 110 (200)
+|+|.|+ |++|.++++.|+..|. ++++++.+.-+.. + ...+ -+++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899997 9999999999999996 7777776531100 0 0111 24666777776
Q ss_pred CHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 111 SSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 111 d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+.....+.++++|+||.+... ...-..+-+.|...++ .+|...+
T Consensus 80 ~~~~~~~f~~~~DvVv~a~Dn-----------~~ar~~in~~c~~~~i-p~I~~gt 123 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDN-----------LAARRHVNKMCLAADV-PLIESGT 123 (312)
T ss_pred CccchHHHHhcCCEEEECCCC-----------HHHHHHHHHHHHHCCC-CEEEEec
Confidence 654345678889999987532 1222344566666664 4555554
No 459
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.60 E-value=0.011 Score=51.09 Aligned_cols=75 Identities=21% Similarity=0.170 Sum_probs=51.8
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
+..+++|+|.|. |..|.++++.|.+.|++|.+.+++.....+.....+++++.++- +++ .++++|.||...|..
T Consensus 12 ~~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~-~~~----~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 12 QELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAE-ASD----QLDSFSLVVTSPGWR 85 (473)
T ss_pred cccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCC-chh----HhcCCCEEEeCCCCC
Confidence 346778999996 99999999999999999999997644321111123556654421 122 345789999998864
Q ss_pred C
Q 029008 133 G 133 (200)
Q Consensus 133 ~ 133 (200)
.
T Consensus 86 ~ 86 (473)
T PRK00141 86 P 86 (473)
T ss_pred C
Confidence 3
No 460
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.60 E-value=0.052 Score=43.47 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=62.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCC-CcEEEeecCCCCcc----c--------------------ccCCC--CeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRG-LTVASLSRSGRSSL----R--------------------DSWAN--NVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~----~--------------------~~~~~--~~~~~~ 106 (200)
....+|+|.|+ |++|.++++.|+..| -++++++.+.-... + ..... +++.+.
T Consensus 28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 35679999997 999999999999999 47888876531100 0 00012 233442
Q ss_pred ccCCCHHHHHHHhc-CCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALD-GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+..+++.+.+++. ++|+||.+.... ..-..+.+.|.+.++ .+|.+..
T Consensus 107 -~~i~~e~~~~ll~~~~D~VIdaiD~~-----------~~k~~L~~~c~~~~i-p~I~~gG 154 (268)
T PRK15116 107 -DFITPDNVAEYMSAGFSYVIDAIDSV-----------RPKAALIAYCRRNKI-PLVTTGG 154 (268)
T ss_pred -cccChhhHHHHhcCCCCEEEEcCCCH-----------HHHHHHHHHHHHcCC-CEEEECC
Confidence 2334566666664 689998876532 222456778888765 4554443
No 461
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=96.60 E-value=0.023 Score=44.98 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=51.0
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCC-CcEEE-eecCCCCcccccC--CCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRG-LTVAS-LSRSGRSSLRDSW--ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g-~~V~~-~~r~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+++|.|.|++|.+|+.+++.+.+.. .++.+ ++|..+....... ......+..-+.| ++.....++|++|-...+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~--~~~~~~~~~DV~IDFT~P 79 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTD--DLLLVKADADVLIDFTTP 79 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeec--chhhcccCCCEEEECCCc
Confidence 5789999999999999999999876 45443 4454332110000 0001111111111 133445567888875443
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCEEE
Q 029008 132 FGSNSYMYKINGTANINAIRAASEKGVKRFV 162 (200)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v 162 (200)
.++...++.|.++++..+|
T Consensus 80 ------------~~~~~~l~~~~~~~~~lVI 98 (266)
T COG0289 80 ------------EATLENLEFALEHGKPLVI 98 (266)
T ss_pred ------------hhhHHHHHHHHHcCCCeEE
Confidence 2345566777776654444
No 462
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.59 E-value=0.0098 Score=48.77 Aligned_cols=65 Identities=22% Similarity=0.211 Sum_probs=48.5
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
...++++.|.|- |.||+.+++.+...|.+|++.++..... . +. ...++++++.++|+|+.+....
T Consensus 144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~--------~-----~~-~~~~l~ell~~sDiv~l~~Plt 208 (314)
T PRK06932 144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASV--------C-----RE-GYTPFEEVLKQADIVTLHCPLT 208 (314)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccc--------c-----cc-ccCCHHHHHHhCCEEEEcCCCC
Confidence 357899999996 9999999999999999999876542110 0 00 1235788999999998877643
No 463
>PRK14851 hypothetical protein; Provisional
Probab=96.59 E-value=0.024 Score=51.22 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=65.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCC------cc-------------------cccC-CCCeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------SL-------------------RDSW-ANNVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~------~~-------------------~~~~-~~~~~~~~ 106 (200)
....+|+|.|+ |++|..+++.|...|. ++++++.+.-. .. .... ..+++.+.
T Consensus 41 L~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 35679999997 9999999999999996 66666644210 00 0001 12567777
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..++ ++++.++++++|+||.+.-.+. +..-..+.+.|.+.++ .+|+.+.
T Consensus 120 ~~i~-~~n~~~~l~~~DvVid~~D~~~---------~~~r~~l~~~c~~~~i-P~i~~g~ 168 (679)
T PRK14851 120 AGIN-ADNMDAFLDGVDVVLDGLDFFQ---------FEIRRTLFNMAREKGI-PVITAGP 168 (679)
T ss_pred cCCC-hHHHHHHHhCCCEEEECCCCCc---------HHHHHHHHHHHHHCCC-CEEEeec
Confidence 7774 5678889999999997653211 1111245667777766 3555543
No 464
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=96.59 E-value=0.0014 Score=49.50 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=27.3
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCC
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR 91 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 91 (200)
|+|.|+|. |++|..++..|++.|++|++++.+++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChH
Confidence 68999986 99999999999999999999998764
No 465
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.59 E-value=0.047 Score=46.19 Aligned_cols=98 Identities=19% Similarity=0.149 Sum_probs=62.7
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c--c---------------------ccCC-CCeeEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L--R---------------------DSWA-NNVIWHQG 107 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~--~---------------------~~~~-~~~~~~~~ 107 (200)
...+|+|+|+ |++|..+++.|...|. ++++++.+.-.. . + ...+ -+++.+..
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4669999998 9999999999999997 677776542110 0 0 0011 13455555
Q ss_pred cCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 108 Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+++ .+...++++++|+||.+... ...-..+-++|.+.++ .+|+.+.
T Consensus 120 ~i~-~~~~~~~~~~~D~Vvd~~d~-----------~~~r~~ln~~~~~~~~-p~v~~~~ 165 (392)
T PRK07878 120 RLD-PSNAVELFSQYDLILDGTDN-----------FATRYLVNDAAVLAGK-PYVWGSI 165 (392)
T ss_pred cCC-hhHHHHHHhcCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence 554 44567788899999987532 1222345567777765 4666655
No 466
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.58 E-value=0.028 Score=47.19 Aligned_cols=99 Identities=19% Similarity=0.273 Sum_probs=64.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCC--cc--c---------------------ccCC-CCeeEEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS--SL--R---------------------DSWA-NNVIWHQ 106 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~--~---------------------~~~~-~~~~~~~ 106 (200)
....+|+|+|+ |++|..+++.|+..|. ++++++.+.-. .. + ...+ -+++.+.
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 45679999998 9999999999999996 78888765211 00 0 0111 2455665
Q ss_pred ccCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 107 GNLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 107 ~Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..++ ++.+.++++++|+||.|.... ..-..+-++|.+.++ .+|+.+.
T Consensus 118 ~~i~-~~~~~~~~~~~DlVid~~Dn~-----------~~r~~in~~~~~~~i-P~v~~~~ 164 (370)
T PRK05600 118 ERLT-AENAVELLNGVDLVLDGSDSF-----------ATKFLVADAAEITGT-PLVWGTV 164 (370)
T ss_pred eecC-HHHHHHHHhCCCEEEECCCCH-----------HHHHHHHHHHHHcCC-CEEEEEE
Confidence 5554 556778899999999985431 222344566777765 4555554
No 467
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=96.57 E-value=0.034 Score=45.31 Aligned_cols=98 Identities=13% Similarity=0.160 Sum_probs=65.6
Q ss_pred EEccCchhHHHHHHHHHHCCC--cEEEeecCCCCccc------c---cCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcc
Q 029008 61 VLGGNGFVGSHICREALDRGL--TVASLSRSGRSSLR------D---SWANNVIWHQGNLLSSDSWKEALDGVTAVISCV 129 (200)
Q Consensus 61 VtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~------~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 129 (200)
|+|+ |.+|..++..|+..+. ++.+++.+.+.... . .....+++...| .+.++++|+||.+|
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~daDivVita 72 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGD-------YSDCKDADLVVITA 72 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCC-------HHHHCCCCEEEECC
Confidence 4676 9999999999998874 78888887653211 0 011233333222 35788999999999
Q ss_pred ccCCCC----cccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 130 GGFGSN----SYMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 130 g~~~~~----~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
|....+ ...+..|..-...+.+.+.+++.+ .++.+|.
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 974322 356778888888888888877655 4554543
No 468
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.57 E-value=0.018 Score=47.18 Aligned_cols=26 Identities=27% Similarity=0.374 Sum_probs=23.2
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGL 81 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~ 81 (200)
+++|.|.||||.+|+.+++.|.++..
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f 26 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF 26 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC
Confidence 46899999999999999999999753
No 469
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.55 E-value=0.01 Score=48.25 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=62.9
Q ss_pred EEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCccc------cc---CCCCeeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 59 LLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLR------DS---WANNVIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 59 ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
|.|+|+ |.+|..++..|+..|. +|++++++++.... .. ......+... .| + +.++++|+||.+
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t--~d---~-~~l~dADiVIit 73 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGT--ND---Y-EDIAGSDVVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEc--CC---H-HHhCCCCEEEEe
Confidence 468998 9999999999998876 99999988653210 00 0011122110 12 3 347899999999
Q ss_pred cccCCCCc----ccchhhHHHHHHHHHHHHHcCCCEE-EEEe
Q 029008 129 VGGFGSNS----YMYKINGTANINAIRAASEKGVKRF-VYIS 165 (200)
Q Consensus 129 ag~~~~~~----~~~~~n~~~~~~~~~~a~~~~~~~~-v~vS 165 (200)
+|....+. ..+..|..-...+++.+.+...+.+ |.+|
T Consensus 74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 98644322 2334566666677777777665544 4554
No 470
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=96.54 E-value=0.0071 Score=38.96 Aligned_cols=34 Identities=32% Similarity=0.670 Sum_probs=30.7
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
+++|.|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5789997 999999999999999999999998654
No 471
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.54 E-value=0.0027 Score=51.88 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=31.4
Q ss_pred CCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCC
Q 029008 56 SEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGR 91 (200)
Q Consensus 56 ~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~ 91 (200)
|++|.|.|+ |.+|..++..|++.|++|.+.+|+++
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~ 35 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPE 35 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 468999997 99999999999999999999998753
No 472
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=96.54 E-value=0.025 Score=50.25 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=55.0
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
..+|+|+|.|+ |.+|+.+++.+.+.|++|++++.+++.+.... . -..+.+|..|.+.+.++.+.+|++...
T Consensus 20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~--A-D~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSV--A-ARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh--C-ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 56789999998 89999999999999999999988754322111 1 134557889999998888889988553
No 473
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.54 E-value=0.015 Score=47.60 Aligned_cols=65 Identities=20% Similarity=0.196 Sum_probs=48.9
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
...++++.|.|- |.||+.+++.+..-|.+|.+.+|..... ...+ ...+++++++.+|+|+.+...
T Consensus 142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~--------~~~~l~ell~~sDvv~lh~Pl 206 (311)
T PRK08410 142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEY--------ERVSLEELLKTSDIISIHAPL 206 (311)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCc--------eeecHHHHhhcCCEEEEeCCC
Confidence 357899999996 9999999999999999999988753221 0111 123578889999988877654
No 474
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.53 E-value=0.08 Score=40.43 Aligned_cols=99 Identities=18% Similarity=0.257 Sum_probs=62.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c----------c---------------ccCC-CCeeEE
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L----------R---------------DSWA-NNVIWH 105 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~----------~---------------~~~~-~~~~~~ 105 (200)
...+|+|.|+ |++|..+++.|...|. ++++++.+.-.. . . ...+ -+++.+
T Consensus 18 ~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 18 RSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred hhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 4579999998 6699999999999996 688877652110 0 0 0011 134555
Q ss_pred EccCCC-HHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 106 QGNLLS-SDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 106 ~~Dl~d-~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..++.+ .+...+.++++|+||.+... ......+-+.|++.++ .+|+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~-----------~~~~~~ln~~c~~~~i-p~i~~~~ 146 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEEN-----------YERTAKVNDVCRKHHI-PFISCAT 146 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence 555542 45566778889999876332 1222345677887776 5666665
No 475
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.53 E-value=0.023 Score=48.88 Aligned_cols=74 Identities=22% Similarity=0.182 Sum_probs=53.9
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc----ccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR----DSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
+|+|.|. |..|...++.|.++|++|.+.+++...... .....+++++.+.-.+.+.++..+.+.|.||...|..
T Consensus 2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~ 79 (459)
T PRK02705 2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIP 79 (459)
T ss_pred eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCC
Confidence 6899997 899999999999999999999987543221 1223366666554344555556777899999988764
No 476
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=96.51 E-value=0.01 Score=49.26 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=51.4
Q ss_pred eEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEE
Q 029008 58 KLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVIS 127 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 127 (200)
+|+|.|+ |.+|..+++.+.+.|++|++++.++....... . -..+..|..|++.+.++.+.+|+|..
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~-a--d~~~~~~~~d~~~i~~~a~~~dvit~ 66 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQV-A--DHVVLAPFFDPAAIRELAESCDVITF 66 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHh-C--ceeEeCCCCCHHHHHHHHhhCCEEEe
Confidence 4789998 89999999999999999999988754432211 1 12446788999999999999998754
No 477
>PRK06849 hypothetical protein; Provisional
Probab=96.49 E-value=0.0083 Score=50.54 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=34.1
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCC
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRS 92 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 92 (200)
.+|+|||||+...+|..+++.|.+.|++|++++..+..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46899999999999999999999999999999887543
No 478
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.49 E-value=0.0055 Score=49.63 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=48.3
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCC--ccccc---CCC--CeeEEEccCCCHHHHHHHhcCCCEE
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS--SLRDS---WAN--NVIWHQGNLLSSDSWKEALDGVTAV 125 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~~~---~~~--~~~~~~~Dl~d~~~~~~~~~~~d~v 125 (200)
..+++++|.|+ |+.+++++-.|...|. +|+++.|+.+. ..+.. ... ...+...++.+.+.+.+.+.+.|+|
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 45689999997 7889999999999996 89999998531 11110 011 1111112232333355566789999
Q ss_pred EEccc
Q 029008 126 ISCVG 130 (200)
Q Consensus 126 i~~ag 130 (200)
||+..
T Consensus 201 INaTp 205 (288)
T PRK12749 201 TNGTK 205 (288)
T ss_pred EECCC
Confidence 99864
No 479
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.45 E-value=0.042 Score=45.86 Aligned_cols=92 Identities=17% Similarity=0.255 Sum_probs=52.2
Q ss_pred CeEEEEccCchhHHHHHHHHH-HCCCc---EEEeecCCC-CcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 57 EKLLVLGGNGFVGSHICREAL-DRGLT---VASLSRSGR-SSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~-~~g~~---V~~~~r~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
++|.|.||||.+|+.+.+.|. ++... ++.+..... ............+. ++.+. ..+.++|++|.++|.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~~~v~--~~~~~----~~~~~vDivffa~g~ 74 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQ--DAFDI----DALKALDIIITCQGG 74 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCcceEE--cCccc----ccccCCCEEEEcCCH
Confidence 478999999999999999999 55543 344433222 11111111122222 33222 245789999999875
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 132 FGSNSYMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 132 ~~~~~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
. -+..+...+.++|.. .+|=-||
T Consensus 75 ~------------~s~~~~p~~~~aG~~~~VIDnSS 98 (366)
T TIGR01745 75 D------------YTNEIYPKLRESGWQGYWIDAAS 98 (366)
T ss_pred H------------HHHHHHHHHHhCCCCeEEEECCh
Confidence 2 123456666777743 3444444
No 480
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.45 E-value=0.064 Score=42.10 Aligned_cols=96 Identities=13% Similarity=0.136 Sum_probs=59.7
Q ss_pred eEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c--c---------------------ccCC-CCeeEEEccCC
Q 029008 58 KLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L--R---------------------DSWA-NNVIWHQGNLL 110 (200)
Q Consensus 58 ~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~--~---------------------~~~~-~~~~~~~~Dl~ 110 (200)
+|+|.|+ |++|..+++.|...|. ++++++.+.-+. . + ...+ -+++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899997 9999999999999996 777777653110 0 0 0111 24566666775
Q ss_pred CHHHH-HHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 111 SSDSW-KEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 111 d~~~~-~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
+...+ ...++++|+||.+... +..-..+-+.|.+.++ .+|..++
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~Dn-----------~~aR~~ln~~c~~~~i-plI~~g~ 124 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALDN-----------IIARRYVNGMLIFLIV-PLIESGT 124 (234)
T ss_pred hhhhchHHHHhCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEcc
Confidence 44333 3567889999887432 2222345566666654 4665555
No 481
>PLN02494 adenosylhomocysteinase
Probab=96.44 E-value=0.009 Score=51.33 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=48.5
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++++|+|. |.||+.+++.+...|.+|+++.+++.+..+. ...++.++ .++++++..|++|.+.|.
T Consensus 252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv--------~leEal~~ADVVI~tTGt 319 (477)
T PLN02494 252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL--------TLEDVVSEADIFVTTTGN 319 (477)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec--------cHHHHHhhCCEEEECCCC
Confidence 46899999997 8999999999999999999988876542211 11223322 134566778888887763
No 482
>PRK14852 hypothetical protein; Provisional
Probab=96.42 E-value=0.032 Score=51.97 Aligned_cols=101 Identities=12% Similarity=0.084 Sum_probs=64.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCC------cc-------------------cccCC-CCeeEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRS------SL-------------------RDSWA-NNVIWHQG 107 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~------~~-------------------~~~~~-~~~~~~~~ 107 (200)
...+|+|.|+ |++|..+++.|...|. ++++++.+.-. .. ...++ -+++.+..
T Consensus 331 ~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~ 409 (989)
T PRK14852 331 LRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPE 409 (989)
T ss_pred hcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEec
Confidence 4569999997 9999999999999996 66666554211 00 00111 24566655
Q ss_pred cCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEecc
Q 029008 108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAA 167 (200)
Q Consensus 108 Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS~ 167 (200)
.+ +++.+.++++++|+||.+.-.+. ...-..+.+.|.+.++ .+|+.++.
T Consensus 410 ~I-~~en~~~fl~~~DiVVDa~D~~~---------~~~rr~l~~~c~~~~I-P~I~ag~~ 458 (989)
T PRK14852 410 GV-AAETIDAFLKDVDLLVDGIDFFA---------LDIRRRLFNRALELGI-PVITAGPL 458 (989)
T ss_pred CC-CHHHHHHHhhCCCEEEECCCCcc---------HHHHHHHHHHHHHcCC-CEEEeecc
Confidence 55 56778889999999998753321 0111345666777765 46666653
No 483
>PLN00203 glutamyl-tRNA reductase
Probab=96.42 E-value=0.0046 Score=54.00 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=51.7
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccC-CCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSW-ANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++|+|+|+ |.+|..+++.|...|. +|++..|+.++...... ..++.+. +...+++...+.++|+||.+.+.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsAT~s 339 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTSTSS 339 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEccCC
Confidence 45789999998 9999999999999996 79999888655322110 0122211 12234556778899999998764
No 484
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.39 E-value=0.016 Score=48.47 Aligned_cols=100 Identities=16% Similarity=0.127 Sum_probs=63.1
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCccc--------------cc-----CCCCeeEEEccCCCHHHHHH
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLR--------------DS-----WANNVIWHQGNLLSSDSWKE 117 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~-----~~~~~~~~~~Dl~d~~~~~~ 117 (200)
|+|.|+|. ||+|....--|++.||+|++++.++.+-.. .. ...+..+ ..++++
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f-------Ttd~~~ 72 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF-------TTDYEE 72 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE-------EcCHHH
Confidence 58899995 999999999999999999999987643110 00 0011222 123577
Q ss_pred HhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Q 029008 118 ALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVK-RFVYISA 166 (200)
Q Consensus 118 ~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~-~~v~vSS 166 (200)
+++..|++|-+.|....++..+ +......+++...+.-.+ ++|.+=|
T Consensus 73 a~~~adv~fIavgTP~~~dg~a--Dl~~V~ava~~i~~~~~~~~vvV~KS 120 (414)
T COG1004 73 AVKDADVVFIAVGTPPDEDGSA--DLSYVEAVAKDIGEILDGKAVVVIKS 120 (414)
T ss_pred HHhcCCEEEEEcCCCCCCCCCc--cHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence 8888999999998654443333 333344445554444322 5665555
No 485
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.38 E-value=0.0098 Score=50.35 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=48.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVG 130 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag 130 (200)
..+++++|.|. |.+|..+++.+...|.+|+++++++.+..+.. ..++.+. + +++++++.|++|.+.|
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~v~-----~---leeal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFRVM-----T---MEEAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCEeC-----C---HHHHHhcCCEEEECCC
Confidence 56889999997 99999999999999999999988765432211 1233222 1 2345667888888776
No 486
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.012 Score=47.40 Aligned_cols=58 Identities=17% Similarity=0.263 Sum_probs=45.5
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccC
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGF 132 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~ 132 (200)
+..+|+|.|+|.+|.+|..++..|+++|+.|++.... . .++++..+++|+||-+.|..
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~--t--------------------~~l~~~~~~ADIVI~avg~~ 212 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSR--T--------------------RNLAEVARKADILVVAIGRG 212 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCC--C--------------------CCHHHHHhhCCEEEEecCcc
Confidence 3578999999999999999999999999999886211 0 02456677788888887753
No 487
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.38 E-value=0.0097 Score=49.14 Aligned_cols=65 Identities=18% Similarity=0.216 Sum_probs=48.8
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++|.|+|. |.+|+.+++.|...|++|++.+|+...... ... -.++++++++++|+|+.+...
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~-----~~~-------~~~~l~ell~~aDiVil~lP~ 208 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLD-----FLT-------YKDSVKEAIKDADIISLHVPA 208 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhh-----hhh-------ccCCHHHHHhcCCEEEEeCCC
Confidence 56789999997 999999999999999999999887543110 000 123467888899988887653
No 488
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.37 E-value=0.0091 Score=49.37 Aligned_cols=67 Identities=18% Similarity=0.174 Sum_probs=49.6
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
..+++|.|+|. |.||+.+++.|...|.+|.+.+|........ ..++ ...+++++++++|+|+.+...
T Consensus 148 L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~--~~~~--------~~~~l~ell~~aDiV~l~lP~ 214 (333)
T PRK13243 148 VYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEK--ELGA--------EYRPLEELLRESDFVSLHVPL 214 (333)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHH--HcCC--------EecCHHHHHhhCCEEEEeCCC
Confidence 57899999997 9999999999999999999988864332110 0011 122467788899999988754
No 489
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.36 E-value=0.021 Score=47.55 Aligned_cols=75 Identities=20% Similarity=0.129 Sum_probs=49.5
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
.+.+|+|.|+ |.+|..+++.+...|.+|++++.+.++.......-++..+ .|..+.+.+.+...++|++|.+.|.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~D~vid~~g~ 257 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF-LVSTDPEKMKAAIGTMDYIIDTVSA 257 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE-EcCCCHHHHHhhcCCCCEEEECCCC
Confidence 4678999775 9999999999999999988877665442211111122221 1334445566655678999998873
No 490
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=96.36 E-value=0.015 Score=40.51 Aligned_cols=85 Identities=19% Similarity=0.249 Sum_probs=50.2
Q ss_pred CeEEEEccC---chhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEccccCC
Q 029008 57 EKLLVLGGN---GFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGGFG 133 (200)
Q Consensus 57 ~~ilVtGa~---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~~~ 133 (200)
|+|.|+|++ +..|..+.+.|.+.|++|+.+.-+...- .+..++ .++.+.-..+|.++.+...
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i------~G~~~y-------~sl~e~p~~iDlavv~~~~-- 65 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI------LGIKCY-------PSLAEIPEPIDLAVVCVPP-- 65 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE------TTEE-B-------SSGGGCSST-SEEEE-S-H--
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE------CcEEee-------ccccCCCCCCCEEEEEcCH--
Confidence 579999987 7789999999999999999875443210 122221 1122212467888776543
Q ss_pred CCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 134 SNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 134 ~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
..+..+++.|.+.|++.+++.++
T Consensus 66 ----------~~~~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 66 ----------DKVPEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp ----------HHHHHHHHHHHHHT-SEEEE-TT
T ss_pred ----------HHHHHHHHHHHHcCCCEEEEEcc
Confidence 23456678888888888888887
No 491
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.36 E-value=0.0092 Score=51.98 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=51.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCH-------------H---H----
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSS-------------D---S---- 114 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~-------------~---~---- 114 (200)
.+.+|+|+|+ |-+|...+..+...|.+|+++++++++..... .-+.+++..|..+. + .
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 3679999998 99999999999999999999998876532211 12444443333221 1 1
Q ss_pred HHHHhcCCCEEEEccccC
Q 029008 115 WKEALDGVTAVISCVGGF 132 (200)
Q Consensus 115 ~~~~~~~~d~vi~~ag~~ 132 (200)
+.+..+++|++|.+++..
T Consensus 242 ~~~~~~gaDVVIetag~p 259 (509)
T PRK09424 242 FAEQAKEVDIIITTALIP 259 (509)
T ss_pred HHhccCCCCEEEECCCCC
Confidence 112234699999999863
No 492
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.35 E-value=0.052 Score=41.43 Aligned_cols=97 Identities=14% Similarity=0.181 Sum_probs=61.0
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcc-------------------------cccCC-CCeeEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSL-------------------------RDSWA-NNVIWHQG 107 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------------------------~~~~~-~~~~~~~~ 107 (200)
...+|+|.|+ |++|.++++.|...|. ++++++.+.-... ....+ -+++++..
T Consensus 20 ~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~ 98 (197)
T cd01492 20 RSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD 98 (197)
T ss_pred HhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence 5679999997 6699999999999997 6777776531100 01111 14455555
Q ss_pred cCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 108 Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
.+. +...+.++++|+||.+... ...-..+-+.|.+.++ .+|+.++
T Consensus 99 ~~~--~~~~~~~~~~dvVi~~~~~-----------~~~~~~ln~~c~~~~i-p~i~~~~ 143 (197)
T cd01492 99 DIS--EKPEEFFSQFDVVVATELS-----------RAELVKINELCRKLGV-KFYATGV 143 (197)
T ss_pred Ccc--ccHHHHHhCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence 554 2245677889999986432 1222345577788776 4666665
No 493
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=96.35 E-value=0.0065 Score=49.89 Aligned_cols=74 Identities=20% Similarity=0.175 Sum_probs=47.2
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccccCCCCeeEEEccCCCH---HHHHHHh-cCCCEEEEcccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRDSWANNVIWHQGNLLSS---DSWKEAL-DGVTAVISCVGG 131 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~-~~~d~vi~~ag~ 131 (200)
.+++|+||+|.+|..+++.+...|. +|++++++.++.......-+++.+ .|..+. +.+.++. .++|++|.+.|.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 7999999999999999999999998 799988765442111000112211 122222 2233332 368999998774
No 494
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.35 E-value=0.0059 Score=49.32 Aligned_cols=74 Identities=9% Similarity=0.122 Sum_probs=47.1
Q ss_pred CCCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCcccc--cCCC--CeeEEEccCCCHHHHHHHhcCCCEEEEc
Q 029008 54 PPSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSSLRD--SWAN--NVIWHQGNLLSSDSWKEALDGVTAVISC 128 (200)
Q Consensus 54 ~~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--~~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 128 (200)
..+++++|.|+ |+.|++++-.|.+.|. +|+++.|+.++.... .... ....+. ..+...+...+..+|+|||+
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~~~~~divINa 201 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARGIEDVIAAADGVVNA 201 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHhHHHHHHhhcCEEEEc
Confidence 34689999998 9999999999999997 688888876542211 0000 111111 11222334445679999998
Q ss_pred cc
Q 029008 129 VG 130 (200)
Q Consensus 129 ag 130 (200)
..
T Consensus 202 Tp 203 (283)
T PRK14027 202 TP 203 (283)
T ss_pred CC
Confidence 64
No 495
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.35 E-value=0.059 Score=42.24 Aligned_cols=97 Identities=16% Similarity=0.165 Sum_probs=60.3
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC-cEEEeecCCCCc--c--c---------------------ccCC-CCeeEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL-TVASLSRSGRSS--L--R---------------------DSWA-NNVIWHQG 107 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~--~---------------------~~~~-~~~~~~~~ 107 (200)
...+|+|.|. |++|.++++.|+..|. ++++++.+.-.. . + ...+ -+++.+..
T Consensus 10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 4679999997 9999999999999996 777777543110 0 0 0011 13444444
Q ss_pred cCCCHHHHHHHhc-CCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEe
Q 029008 108 NLLSSDSWKEALD-GVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYIS 165 (200)
Q Consensus 108 Dl~d~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vS 165 (200)
.++ ++.+..++. ++|+||.+.... ..-..+.+.|.+.++ .+|...
T Consensus 89 ~i~-~~~~~~l~~~~~D~VvdaiD~~-----------~~k~~L~~~c~~~~i-p~I~s~ 134 (231)
T cd00755 89 FLT-PDNSEDLLGGDPDFVVDAIDSI-----------RAKVALIAYCRKRKI-PVISSM 134 (231)
T ss_pred ecC-HhHHHHHhcCCCCEEEEcCCCH-----------HHHHHHHHHHHHhCC-CEEEEe
Confidence 443 455666664 689999875331 223456788888765 344433
No 496
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.34 E-value=0.018 Score=46.39 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=46.5
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+..+++++|+|.+..+|+.++..|+++|+.|++..+.. .++++..+++|+||..+|.
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T----------------------~~l~~~~~~ADIvi~avG~ 212 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT----------------------KNLRHHVRNADLLVVAVGK 212 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC----------------------CCHHHHHhhCCEEEEcCCC
Confidence 35689999999999999999999999999998876531 1256677788888888874
No 497
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=96.33 E-value=0.08 Score=41.98 Aligned_cols=73 Identities=23% Similarity=0.268 Sum_probs=53.1
Q ss_pred CeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcc-cccCCCCeeEEEccCCCHHHHHHHhc--CCCEEEEcccc
Q 029008 57 EKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSL-RDSWANNVIWHQGNLLSSDSWKEALD--GVTAVISCVGG 131 (200)
Q Consensus 57 ~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~ag~ 131 (200)
|+|+|.||| .=|+.|+..|.++|+ |.+.+-..-... .........+..+-+.|.+.+.+.++ +++.||...-+
T Consensus 1 m~ILvlgGT-tE~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 1 MKILVLGGT-TEGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred CEEEEEech-HHHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence 689999997 678999999999998 655443322211 11122456788888889999999985 79999997654
No 498
>PRK07877 hypothetical protein; Provisional
Probab=96.32 E-value=0.031 Score=50.76 Aligned_cols=97 Identities=18% Similarity=0.142 Sum_probs=65.9
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCC--cEEEeecCCCC--cc--c--------------------ccC-CCCeeEEEc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGL--TVASLSRSGRS--SL--R--------------------DSW-ANNVIWHQG 107 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~--~V~~~~r~~~~--~~--~--------------------~~~-~~~~~~~~~ 107 (200)
...+|+|.|+ | +|..++..|+..|. ++++++.+.=. +. . ... .-+++.+..
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~ 183 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD 183 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4679999999 7 99999999999994 78888765311 00 0 001 125667776
Q ss_pred cCCCHHHHHHHhcCCCEEEEccccCCCCcccchhhHHHHHHHHHHHHHcCCCEEEEEec
Q 029008 108 NLLSSDSWKEALDGVTAVISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISA 166 (200)
Q Consensus 108 Dl~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~n~~~~~~~~~~a~~~~~~~~v~vSS 166 (200)
.++ ++++.++++++|+||.|.-. +..-..+-++|.+.++ -+|+-++
T Consensus 184 ~i~-~~n~~~~l~~~DlVvD~~D~-----------~~~R~~ln~~a~~~~i-P~i~~~~ 229 (722)
T PRK07877 184 GLT-EDNVDAFLDGLDVVVEECDS-----------LDVKVLLREAARARRI-PVLMATS 229 (722)
T ss_pred cCC-HHHHHHHhcCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence 665 77899999999999998532 1222345577777765 4665554
No 499
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.32 E-value=0.017 Score=46.51 Aligned_cols=57 Identities=21% Similarity=0.293 Sum_probs=45.4
Q ss_pred CCCCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 029008 53 PPPSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWKEALDGVTAVISCVGG 131 (200)
Q Consensus 53 ~~~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ag~ 131 (200)
+..+++++|.|.++.+|+.++..|.++|..|++..... .++.+.++..|+||..+|.
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------~~l~~~~~~ADIVV~avG~ 211 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------RDLAAHTRQADIVVAAVGK 211 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------CCHHHHhhhCCEEEEcCCC
Confidence 35789999999999999999999999999998754321 1245677788888888774
No 500
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=96.30 E-value=0.012 Score=48.11 Aligned_cols=75 Identities=24% Similarity=0.181 Sum_probs=47.8
Q ss_pred CCCeEEEEccCchhHHHHHHHHHHCCCcEEEeecCCCCcccccCCCCeeEEEccCCCHHHHH----HHh-cCCCEEEEcc
Q 029008 55 PSEKLLVLGGNGFVGSHICREALDRGLTVASLSRSGRSSLRDSWANNVIWHQGNLLSSDSWK----EAL-DGVTAVISCV 129 (200)
Q Consensus 55 ~~~~ilVtGa~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~d~~~~~----~~~-~~~d~vi~~a 129 (200)
.+.+|+|+|++|.+|..+++.+...|.+|++++++.++... ...-++..+ .|..+.+.+. ... .++|+++.+.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~-~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~ 215 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY-LKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNV 215 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECC
Confidence 46799999999999999999999999999988876544211 111122211 1222222222 222 2589999988
Q ss_pred cc
Q 029008 130 GG 131 (200)
Q Consensus 130 g~ 131 (200)
|.
T Consensus 216 G~ 217 (325)
T TIGR02825 216 GG 217 (325)
T ss_pred CH
Confidence 74
Done!