BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029009
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46604|HAT22_ARATH Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana
GN=HAT22 PE=1 SV=1
Length = 278
Score = 154 bits (389), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 132/212 (62%), Gaps = 47/212 (22%)
Query: 1 MGFDDGCNTGLVLGLGFASAIETTPTNKANNI----NIVNHQQLQLPKGTCFEPSLSLGL 56
MG DD CNTGLVLGLG + TP N + I + V+H+ ++L +PSL+L L
Sbjct: 1 MGLDDSCNTGLVLGLGLSP----TPNNYNHAIKKSSSTVDHRFIRL------DPSLTLSL 50
Query: 57 PGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVV 116
GE Y+ AG + QI RQ S + +SFSSGRV
Sbjct: 51 SGE---------------------SYKIKTGAGAGD-QIC-RQTS-SHSGISSFSSGRV- 85
Query: 117 KRERDLSSEE------IEVEKVISSRASDE--DEDGVNARKKLRLTKEQSALLEESFKQH 168
KRER++S + E+V+ SR SD+ DE+GV+ARKKLRLTK+QSALLE++FK H
Sbjct: 86 KREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLH 145
Query: 169 STLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
STLNPKQKQALARQLNLRPRQVEVWFQNRRAR
Sbjct: 146 STLNPKQKQALARQLNLRPRQVEVWFQNRRAR 177
>sp|P46603|HAT9_ARATH Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana
GN=HAT9 PE=2 SV=2
Length = 274
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 121/202 (59%), Gaps = 40/202 (19%)
Query: 1 MGFDDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEI 60
MGFDD CNTGLVLGLG P+ NN N Q EPSL+L L G+
Sbjct: 1 MGFDDTCNTGLVLGLG--------PSPIPNNYNSTIRQSSVYK----LEPSLTLCLSGD- 47
Query: 61 YPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRER 120
S+ V G ++ L RQ S + +SFSSGRVVKRER
Sbjct: 48 -------------PSVTVVTGADQ-----------LCRQTS-SHSGVSSFSSGRVVKRER 82
Query: 121 DLSSEEIEVEKVISSRASD--EDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQA 178
D E E E++ SD EDE+G++ARKKLRLTK+QSALLEESFK HSTLNPKQKQ
Sbjct: 83 DGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQV 142
Query: 179 LARQLNLRPRQVEVWFQNRRAR 200
LARQLNLRPRQVEVWFQNRRAR
Sbjct: 143 LARQLNLRPRQVEVWFQNRRAR 164
>sp|Q6YPD0|HOX27_ORYSJ Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp.
japonica GN=HOX27 PE=2 SV=1
Length = 354
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
Query: 134 SSRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVW 193
SSRASD+DE G +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVW
Sbjct: 160 SSRASDDDE-GASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVW 218
Query: 194 FQNRRAR 200
FQNRRAR
Sbjct: 219 FQNRRAR 225
>sp|A2YW03|HOX27_ORYSI Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica
GN=HOX27 PE=2 SV=2
Length = 354
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
Query: 134 SSRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVW 193
SSRASD+DE G +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVW
Sbjct: 160 SSRASDDDE-GASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVW 218
Query: 194 FQNRRAR 200
FQNRRAR
Sbjct: 219 FQNRRAR 225
>sp|Q67UE2|HOX11_ORYSJ Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp.
japonica GN=HOX11 PE=2 SV=1
Length = 362
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Query: 135 SRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWF 194
SRASDED DG +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWF
Sbjct: 164 SRASDED-DGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWF 222
Query: 195 QNRRAR 200
QNRRAR
Sbjct: 223 QNRRAR 228
>sp|A2Z1U1|HOX11_ORYSI Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica
GN=HOX11 PE=2 SV=1
Length = 276
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Query: 135 SRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWF 194
SRASDED DG +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWF
Sbjct: 77 SRASDED-DGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWF 135
Query: 195 QNRRAR 200
QNRRAR
Sbjct: 136 QNRRAR 141
>sp|P46665|HAT14_ARATH Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana
GN=HAT14 PE=2 SV=3
Length = 336
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 80/108 (74%), Gaps = 8/108 (7%)
Query: 100 ASPHSAVSNSFSSGRVVKR---ERDLSSEEI--EVEKVISSRASDEDEDGVNA--RKKLR 152
SP +V++SF +K ER + +I EVE+ +SRAS+ED D N RKKLR
Sbjct: 135 VSPPDSVTSSFQLDFGIKSYGYERRSNKRDIDDEVERS-ASRASNEDNDDENGSTRKKLR 193
Query: 153 LTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
L+K+QSA LE+SFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRAR
Sbjct: 194 LSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRAR 241
>sp|Q8GRL4|HOX19_ORYSJ Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp.
japonica GN=HOX19 PE=2 SV=1
Length = 292
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 71/85 (83%), Gaps = 3/85 (3%)
Query: 116 VKRERDLSSEEIEVEKVISSRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQ 175
VKRER +EE + E+V S+ A +D+D + RKKLRLTKEQSALLE+ F++HSTLNPKQ
Sbjct: 97 VKRER---AEEADGERVSSTAAGRDDDDDGSTRKKLRLTKEQSALLEDRFREHSTLNPKQ 153
Query: 176 KQALARQLNLRPRQVEVWFQNRRAR 200
K ALA+QLNLRPRQVEVWFQNRRAR
Sbjct: 154 KVALAKQLNLRPRQVEVWFQNRRAR 178
>sp|A2XE76|HOX19_ORYSI Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica
GN=HOX19 PE=2 SV=1
Length = 292
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 71/85 (83%), Gaps = 3/85 (3%)
Query: 116 VKRERDLSSEEIEVEKVISSRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQ 175
VKRER +EE + E+V S+ A +D+D + RKKLRLTKEQSALLE+ F++HSTLNPKQ
Sbjct: 97 VKRER---AEEADGERVSSTAAGRDDDDDGSTRKKLRLTKEQSALLEDRFREHSTLNPKQ 153
Query: 176 KQALARQLNLRPRQVEVWFQNRRAR 200
K ALA+QLNLRPRQVEVWFQNRRAR
Sbjct: 154 KVALAKQLNLRPRQVEVWFQNRRAR 178
>sp|Q05466|HAT4_ARATH Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana
GN=HAT4 PE=1 SV=1
Length = 284
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 59/66 (89%)
Query: 135 SRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWF 194
SR +DEDG N+RKKLRL+K+QSA+LEE+FK HSTLNPKQKQALA+QL LR RQVEVWF
Sbjct: 115 SRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWF 174
Query: 195 QNRRAR 200
QNRRAR
Sbjct: 175 QNRRAR 180
>sp|P46601|HAT2_ARATH Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana
GN=HAT2 PE=2 SV=2
Length = 283
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 110/209 (52%), Gaps = 39/209 (18%)
Query: 1 MGFDDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEI 60
MG +D GL L LGF+ N N ++ N+ Q +LP F+P+ L
Sbjct: 3 MGKED---LGLSLSLGFSQNHNPLQMNLNPNSSLSNNLQ-RLPWNQTFDPTSDL------ 52
Query: 61 YPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRE- 119
K + NS EE +SP+S +S++ S G+ +RE
Sbjct: 53 --------RKIDVNSFPSTVNCEEDTGV-----------SSPNSTISSTIS-GKRSEREG 92
Query: 120 -------RDLSSEEIEVEKVISSRASDEDEDG-VNARKKLRLTKEQSALLEESFKQHSTL 171
+EI ++ S SDE+EDG +RKKLRL+K+QSA LEE+FK+H+TL
Sbjct: 93 ISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTL 152
Query: 172 NPKQKQALARQLNLRPRQVEVWFQNRRAR 200
NPKQK ALA++LNL RQVEVWFQNRRAR
Sbjct: 153 NPKQKLALAKKLNLTARQVEVWFQNRRAR 181
>sp|Q7G737|HOX15_ORYSJ Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp.
japonica GN=HOX15 PE=2 SV=1
Length = 247
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 55/58 (94%)
Query: 143 DGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
+G N+RKKLRL+KEQSALLE+ FK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRAR
Sbjct: 88 EGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRAR 145
>sp|A2Z4C4|HOX15_ORYSI Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica
GN=HOX15 PE=2 SV=1
Length = 248
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 55/58 (94%)
Query: 143 DGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
+G N+RKKLRL+KEQSALLE+ FK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRAR
Sbjct: 88 EGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRAR 145
>sp|Q0E0A6|HOX7_ORYSJ Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp.
japonica GN=HOX7 PE=1 SV=1
Length = 349
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 54/64 (84%)
Query: 137 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQN 196
A DED G ARKKLRL+KEQS+ LE+SFK+HSTL PKQK LA +LNLRPRQVEVWFQN
Sbjct: 141 ADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQN 200
Query: 197 RRAR 200
RRAR
Sbjct: 201 RRAR 204
>sp|A2X674|HOX7_ORYSI Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica
GN=HOX7 PE=1 SV=2
Length = 349
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 54/64 (84%)
Query: 137 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQN 196
A DED G ARKKLRL+KEQS+ LE+SFK+HSTL PKQK LA +LNLRPRQVEVWFQN
Sbjct: 141 ADDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQN 200
Query: 197 RRAR 200
RRAR
Sbjct: 201 RRAR 204
>sp|P46602|HAT3_ARATH Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana
GN=HAT3 PE=2 SV=2
Length = 315
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 90/147 (61%), Gaps = 34/147 (23%)
Query: 76 IDVNKGYE------ESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLSS----- 124
IDVN+ E AGV+ SP+S VS S SG+ K ER+L +
Sbjct: 79 IDVNRAPSTVVVDVEDEGAGVS---------SPNSTVS-SVMSGK--KSERELMAAAGAV 126
Query: 125 -----EEIEVEKVISSRAS-DEDEDGV-----NARKKLRLTKEQSALLEESFKQHSTLNP 173
E+ E+E+ S +DEDG ++RKKLRL+KEQ+ +LEE+FK+HSTLNP
Sbjct: 127 GGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNP 186
Query: 174 KQKQALARQLNLRPRQVEVWFQNRRAR 200
KQK ALA+QLNLR RQVEVWFQNRRAR
Sbjct: 187 KQKMALAKQLNLRTRQVEVWFQNRRAR 213
>sp|P46600|HAT1_ARATH Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana
GN=HAT1 PE=2 SV=1
Length = 282
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 10/110 (9%)
Query: 100 ASPHSAVSNSFSSGRVVKRERDLSSE-------EIEVEKVISSRASDEDED--GVNARKK 150
+SP+S +S++ S G+ ER+ +S +I +++ S SDE+ED G RKK
Sbjct: 78 SSPNSTISSTVS-GKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKK 136
Query: 151 LRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
LRL+K+QSA+LE++FK+H+TLNPKQK ALA++L L RQVEVWFQNRRAR
Sbjct: 137 LRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRAR 186
>sp|Q7XC54|HOX1_ORYSJ Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp.
japonica GN=HOX1 PE=1 SV=1
Length = 311
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 54/57 (94%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
G +RKKLRL+K+Q+A+LE++FK+H+TLNPKQK ALARQLNL+PRQVEVWFQNRRAR
Sbjct: 152 GGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRAR 208
>sp|Q40691|HOX1_ORYSI Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica
GN=HOX1 PE=1 SV=2
Length = 311
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 54/57 (94%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
G +RKKLRL+K+Q+A+LE++FK+H+TLNPKQK ALARQLNL+PRQVEVWFQNRRAR
Sbjct: 152 GGGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRAR 208
>sp|Q5VPE5|HOX28_ORYSJ Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp.
japonica GN=HOX28 PE=2 SV=1
Length = 256
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
D G ARKKLRL+K+Q+A+LEE FK H TL PKQK ALA+ LNLRPRQVEVWFQNRRAR
Sbjct: 86 DVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRAR 145
>sp|A2Y931|HOX28_ORYSI Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica
GN=HOX28 PE=2 SV=2
Length = 256
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
D G ARKKLRL+K+Q+A+LEE FK H TL PKQK ALA+ LNLRPRQVEVWFQNRRAR
Sbjct: 86 DVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRAR 145
>sp|Q8S9N6|ATB17_ARATH Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana
GN=ATHB-17 PE=2 SV=1
Length = 275
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 61/79 (77%), Gaps = 5/79 (6%)
Query: 127 IEVEKVISSRASDEDE----DG-VNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALAR 181
+++ ++ SS D++E DG RKKLRLT+EQS LLE+SF+Q+ TLNPKQK+ LA+
Sbjct: 112 LDMNRLPSSEDGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAK 171
Query: 182 QLNLRPRQVEVWFQNRRAR 200
L LRPRQ+EVWFQNRRAR
Sbjct: 172 HLMLRPRQIEVWFQNRRAR 190
>sp|P92953|ATHB4_ARATH Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana
GN=ATHB-4 PE=2 SV=1
Length = 318
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 50/53 (94%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
RKKLRL+K+Q+ +LEE+FK+HSTLNPKQK ALA+QLNLR RQVEVWFQNRRAR
Sbjct: 162 RKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRAR 214
>sp|Q01I23|HOX17_ORYSI Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica
GN=HOX17 PE=2 SV=1
Length = 247
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 52/58 (89%), Gaps = 2/58 (3%)
Query: 143 DGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
DG +RKKLRL+K+QSA+LE+SF++H TLNP+QK LA+QL LRPRQVEVWFQNRRAR
Sbjct: 78 DG--SRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRAR 133
>sp|Q0JB92|HOX17_ORYSJ Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp.
japonica GN=HOX17 PE=2 SV=1
Length = 247
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 52/58 (89%), Gaps = 2/58 (3%)
Query: 143 DGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
DG +RKKLRL+K+QSA+LE+SF++H TLNP+QK LA+QL LRPRQVEVWFQNRRAR
Sbjct: 78 DG--SRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRAR 133
>sp|Q5VPE3|HOX2_ORYSJ Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp.
japonica GN=HOX2 PE=1 SV=1
Length = 308
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 58/75 (77%)
Query: 126 EIEVEKVISSRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNL 185
E E+E+ S D+ DG RKKLRL+K+Q+A+LEE FK HSTLNPKQK ALA +L L
Sbjct: 92 ERELERSGSGVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGL 151
Query: 186 RPRQVEVWFQNRRAR 200
RPRQVEVWFQNRRAR
Sbjct: 152 RPRQVEVWFQNRRAR 166
>sp|Q84U86|HOX2_ORYSI Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica
GN=HOX2 PE=1 SV=1
Length = 308
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 58/75 (77%)
Query: 126 EIEVEKVISSRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNL 185
E E+E+ S D+ DG RKKLRL+K+Q+A+LEE FK HSTLNPKQK ALA +L L
Sbjct: 92 ERELERSGSGVDDDDGADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGL 151
Query: 186 RPRQVEVWFQNRRAR 200
RPRQVEVWFQNRRAR
Sbjct: 152 RPRQVEVWFQNRRAR 166
>sp|Q0JKX1|HOX3_ORYSJ Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp.
japonica GN=HOX3 PE=1 SV=1
Length = 229
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 128 EVEKVISSRASDEDEDGVNAR---KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLN 184
E E + S DE+E GV KKLRL+KEQS LLEESF+ + TL PKQK+ALA +L
Sbjct: 54 EEEFPMGSVEEDEEERGVGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLK 113
Query: 185 LRPRQVEVWFQNRRAR 200
LRPRQVEVWFQNRRAR
Sbjct: 114 LRPRQVEVWFQNRRAR 129
>sp|Q9XH38|HOX3_ORYSI Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica
GN=HOX3 PE=1 SV=1
Length = 229
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 128 EVEKVISSRASDEDEDGVNAR---KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLN 184
E E + S DE+E GV KKLRL+KEQS LLEESF+ + TL PKQK+ALA +L
Sbjct: 54 EEEFPMGSVEEDEEERGVGGPHRPKKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLK 113
Query: 185 LRPRQVEVWFQNRRAR 200
LRPRQVEVWFQNRRAR
Sbjct: 114 LRPRQVEVWFQNRRAR 129
>sp|A2YGL9|HOX18_ORYSI Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica
GN=HOX18 PE=2 SV=1
Length = 256
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
RKKL+LTKEQS LLE+SF+ H+ L+ QK LARQL L+PRQVEVWFQNRRAR
Sbjct: 114 RKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRAR 166
>sp|Q5Z6F6|HOX18_ORYSJ Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp.
japonica GN=HOX18 PE=2 SV=1
Length = 256
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
RKKL+LTKEQS LLE+SF+ H+ L+ QK LARQL L+PRQVEVWFQNRRAR
Sbjct: 114 RKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRAR 166
>sp|Q8GXM7|ATHBX_ARATH Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana
GN=ATHB-X PE=2 SV=1
Length = 206
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 46/62 (74%)
Query: 139 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRR 198
D+ G RKKLRLTKEQS LLEESF Q+ TL PKQK+ LA L L RQVEVWFQNRR
Sbjct: 59 DDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRR 118
Query: 199 AR 200
AR
Sbjct: 119 AR 120
>sp|Q67UX6|HOX26_ORYSJ Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa
subsp. japonica GN=HOX26 PE=3 SV=1
Length = 248
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
DE+G + RKKLRLT EQ+ LLE+SF+ H+ L+ +KQ LA +L L RQVEVWFQNRRAR
Sbjct: 110 DEEGAS-RKKLRLTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRAR 168
>sp|Q6YWR4|HOX16_ORYSJ Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp.
japonica GN=HOX16 PE=2 SV=1
Length = 343
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RLT EQ LLE SF++ + L P++K LAR+L L+PRQV VWFQNRRAR
Sbjct: 77 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRAR 128
>sp|A2X980|HOX16_ORYSI Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica
GN=HOX16 PE=2 SV=1
Length = 345
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RLT EQ LLE SF++ + L P++K LAR+L L+PRQV VWFQNRRAR
Sbjct: 79 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRAR 130
>sp|Q6ZA74|HOX5_ORYSJ Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp.
japonica GN=HOX5 PE=1 SV=1
Length = 349
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RLT EQ +LE SF++ + L P++K LAR+L + PRQV VWFQNRRAR
Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRAR 137
>sp|Q9XH36|HOX5_ORYSI Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica
GN=HOX5 PE=1 SV=1
Length = 350
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RLT EQ +LE SF++ + L P++K LAR+L + PRQV VWFQNRRAR
Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRAR 137
>sp|Q02283|HAT5_ARATH Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana
GN=HAT5 PE=1 SV=1
Length = 272
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RLT EQ LLE+SF+ + L P++K LA++L L+PRQV VWFQNRRAR
Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRAR 119
>sp|Q6K498|HOX4_ORYSJ Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp.
japonica GN=HOX4 PE=1 SV=1
Length = 277
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
G KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR
Sbjct: 46 GGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRAR 102
>sp|Q9XH37|HOX4_ORYSI Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica
GN=HOX4 PE=1 SV=1
Length = 277
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
G KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR
Sbjct: 46 GGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRAR 102
>sp|Q338Z7|HOX8_ORYSJ Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp.
japonica GN=HOX8 PE=2 SV=1
Length = 305
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RL EQ LE SF+ + L+P++K +AR L L PRQV VWFQNRRAR
Sbjct: 65 KKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRAR 116
>sp|Q6Z248|HOX20_ORYSJ Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp.
japonica GN=HOX20 PE=2 SV=1
Length = 269
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR
Sbjct: 43 KKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRAR 94
>sp|A2YWC0|HOX20_ORYSI Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica
GN=HOX20 PE=2 SV=1
Length = 269
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RL+ EQ LE SF+ + L P++K LAR L L+PRQV VWFQNRRAR
Sbjct: 43 KKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRAR 94
>sp|Q6V9S9|HOX8_ORYSI Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica
GN=HOX8 PE=2 SV=1
Length = 281
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RL EQ LE SF+ + L+P++K +AR L L PRQV VWFQNRRAR
Sbjct: 41 KKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRAR 92
>sp|Q10QP3|HOX13_ORYSJ Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp.
japonica GN=HOX13 PE=2 SV=1
Length = 311
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 35/52 (67%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RL EQ LE SF + L+P +K +AR L L+PRQV VWFQNRRAR
Sbjct: 72 KKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRAR 123
>sp|A2XDD6|HOX13_ORYSI Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica
GN=HOX13 PE=2 SV=2
Length = 312
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 35/52 (67%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
KK RL EQ LE SF + L+P +K +AR L L+PRQV VWFQNRRAR
Sbjct: 72 KKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRAR 123
>sp|Q8S7W9|HOX21_ORYSJ Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp.
japonica GN=HOX21 PE=2 SV=1
Length = 366
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 142 EDGVNA-RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
+DG A KK RL EQ LE++F+ + L P++K LAR L L+PRQV +WFQNRRAR
Sbjct: 122 DDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRAR 181
>sp|Q651Z5|HOX6_ORYSJ Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp.
japonica GN=HOX6 PE=2 SV=1
Length = 249
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 147 ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
A +K R ++EQ LE F + L P+QK LAR+L L+PRQV +WFQN+RAR
Sbjct: 28 ADRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRAR 81
>sp|Q9XH35|HOX6_ORYSI Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica
GN=HOX6 PE=2 SV=2
Length = 249
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 147 ARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRAR 200
A +K R ++EQ LE F + L P+QK LAR+L L+PRQV +WFQN+RAR
Sbjct: 28 ADRKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRAR 81
>sp|A3BYC1|HOX25_ORYSJ Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp.
japonica GN=HOX25 PE=2 SV=2
Length = 320
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 126 EIEVEKVISS-RASDEDEDGVNARKKLRLTKEQSALLEESFKQHS-TLNPKQKQALARQL 183
E+++E ++ DE A +K RLT EQ LE SF++ L P++K LAR+L
Sbjct: 58 ELQMEDLVDELYGVDEQGSSSAAARKRRLTAEQVRALERSFEEEKRKLEPERKSELARRL 117
Query: 184 NLRPRQVEVWFQNRRAR 200
+ PRQV VWFQNRRAR
Sbjct: 118 GIAPRQVAVWFQNRRAR 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,169,245
Number of Sequences: 539616
Number of extensions: 2701888
Number of successful extensions: 10317
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 9017
Number of HSP's gapped (non-prelim): 1452
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)