Query         029012
Match_columns 200
No_of_seqs    277 out of 1783
Neff          8.2 
Searched_HMMs 13730
Date          Mon Mar 25 09:36:31 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029012.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029012hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1iyma_ g.44.1.1 (A:) EL5 RING  99.8 3.9E-19 2.8E-23  110.7   5.0   52  132-183     2-54  (55)
  2 d1chca_ g.44.1.1 (A:) Immediat  99.7 2.2E-17 1.6E-21  107.1   4.1   48  134-183     4-51  (68)
  3 d3dplr1 g.44.1.1 (R:19-106) RI  99.6 4.8E-16 3.5E-20  105.7   4.4   53  133-185    19-86  (88)
  4 d2baya1 g.44.1.2 (A:1-56) Pre-  99.6 2.6E-16 1.9E-20   98.0   2.8   50  136-187     1-50  (56)
  5 d1rmda2 g.44.1.1 (A:1-86) V(D)  99.6 2.3E-16 1.7E-20  106.5   2.3   61  134-198    22-83  (86)
  6 d1g25a_ g.44.1.1 (A:) TFIIH Ma  99.6 5.4E-16 3.9E-20   99.5   3.8   53  134-186     2-57  (65)
  7 d1ur6b_ g.44.1.1 (B:) Not-4 N-  99.6 4.2E-16 3.1E-20   95.6   2.5   49  136-184     1-51  (52)
  8 d1fbva4 g.44.1.1 (A:356-434) C  99.6 1.2E-15 8.6E-20  101.6   4.9   48  135-185    23-71  (79)
  9 d1v87a_ g.44.1.1 (A:) Deltex p  99.5   2E-15 1.5E-19  107.2   4.9   52  133-184    23-94  (114)
 10 d1jm7a_ g.44.1.1 (A:) brca1 RI  99.5 3.3E-15 2.4E-19  104.3   1.7   52  133-187    19-73  (103)
 11 d1bora_ g.44.1.1 (A:) Acute pr  99.4 6.1E-15 4.5E-19   91.6   0.7   46  134-185     5-50  (56)
 12 d1jm7b_ g.44.1.1 (B:) bard1 RI  99.4 9.4E-15 6.8E-19  100.9   0.2   51  133-187    20-70  (97)
 13 d2c2la2 g.44.1.2 (A:225-304) S  99.4 5.3E-14 3.9E-18   93.6   3.0   52  133-187     5-57  (80)
 14 d1t1ha_ g.44.1.2 (A:) E3 ubiqu  99.4 9.3E-14 6.8E-18   92.0   2.4   52  133-187     6-58  (78)
 15 d1vyxa_ g.44.1.3 (A:) IE1B pro  99.3 4.8E-13 3.5E-17   84.0   3.3   50  132-184     3-59  (60)
 16 d1wgma_ g.44.1.2 (A:) Ubiquiti  99.2 2.7E-12 1.9E-16   88.4   3.2   52  134-188    21-73  (98)
 17 d1wima_ g.44.1.1 (A:) UbcM4-in  98.8 1.1E-09 7.9E-14   74.2   2.5   47  133-179     3-57  (94)
 18 d1f62a_ g.50.1.2 (A:) Williams  95.0  0.0094 6.9E-07   34.3   3.1   44  137-180     2-49  (51)
 19 d1mm2a_ g.50.1.2 (A:) Mi2-beta  92.4   0.018 1.3E-06   34.4   0.9   48  133-183     7-58  (61)
 20 d1fp0a1 g.50.1.2 (A:19-88) Nuc  91.2   0.031 2.3E-06   34.3   1.1   47  134-183     6-56  (70)
 21 d1wila_ g.50.1.3 (A:) Hypothet  91.0   0.095 6.9E-06   33.0   3.3   36  132-168    12-47  (89)
 22 d1we9a_ g.50.1.2 (A:) PHD fing  90.9   0.022 1.6E-06   34.2   0.2   49  133-181     4-58  (64)
 23 d1z60a1 g.49.1.2 (A:328-386) T  90.5   0.067 4.9E-06   31.6   2.1   45  134-178    14-58  (59)
 24 d1wesa_ g.50.1.2 (A:) PHD Inhi  88.5    0.14   1E-05   31.4   2.6   42  135-181    16-65  (71)
 25 d1wema_ g.50.1.2 (A:) Death as  85.3    0.34 2.5E-05   29.5   3.2   46  134-180    15-69  (76)
 26 d2cs3a1 g.44.1.3 (A:8-87) Prot  84.9    0.68 4.9E-05   28.1   4.2   37  134-171     7-45  (80)
 27 d1weva_ g.50.1.2 (A:) PHD fing  81.5    0.12 8.6E-06   32.8  -0.3   50  133-182    14-73  (88)
 28 d1wewa_ g.50.1.2 (A:) Sumoylat  79.4    0.75 5.5E-05   28.2   3.1   47  133-181    14-72  (78)
 29 d1y02a2 g.50.1.1 (A:20-70) Rif  76.4    0.12 9.1E-06   29.5  -1.3   44  137-180     2-46  (51)
 30 d1weoa_ g.44.1.1 (A:) Cellulos  75.5     2.5 0.00018   26.4   4.7   51  133-183    14-69  (93)
 31 d2pnxa1 g.50.1.2 (A:195-245) I  75.4    0.35 2.5E-05   27.4   0.5   40  136-180     3-50  (51)
 32 d2o35a1 a.293.1.1 (A:2-80) Hyp  74.0    0.56 4.1E-05   28.9   1.2   12  159-170    39-50  (79)
 33 d1wepa_ g.50.1.2 (A:) PHD fing  73.1     3.9 0.00029   24.7   5.3   47  136-182    12-64  (79)
 34 d2jnea1 g.41.18.1 (A:1-71) Hyp  71.9   0.082 5.9E-06   32.3  -3.1   41  135-183     2-42  (71)
 35 d1zbdb_ g.50.1.1 (B:) Effector  70.6     1.1   8E-05   30.0   2.3   52  131-182    44-101 (124)
 36 d1weea_ g.50.1.2 (A:) PHD fing  70.5     0.3 2.2E-05   29.6  -0.7   46  135-181    16-66  (72)
 37 d1dvpa2 g.50.1.1 (A:149-220) H  65.7     2.1 0.00015   25.7   2.7   34  135-168    13-47  (72)
 38 d1joca1 g.50.1.1 (A:1348-1411)  62.9     3.3 0.00024   24.1   3.2   37  133-169     6-43  (64)
 39 d1vfya_ g.50.1.1 (A:) vps27p p  60.8     3.3 0.00024   24.3   2.9   35  135-169     5-40  (67)
 40 d2dloa1 g.39.1.3 (A:8-42) Thyr  60.6     1.5 0.00011   22.7   1.0   27  135-164     8-34  (35)
 41 d2epqa1 g.37.1.1 (A:380-411) P  59.0     2.1 0.00015   21.1   1.3   14  173-186     4-17  (32)
 42 d2ct7a1 g.44.1.4 (A:8-80) Ring  58.4    0.88 6.4E-05   27.5  -0.2   37  135-171    18-57  (73)
 43 d1v6ga1 g.39.1.3 (A:1-41) Acti  57.7     1.9 0.00014   23.1   1.1   29  133-164    13-41  (41)
 44 d2co8a2 g.39.1.3 (A:8-43) Nedd  48.4     4.2 0.00031   21.0   1.6   28  134-164     7-35  (36)
 45 d1wfka_ g.50.1.1 (A:) Zinc fin  41.1     9.4 0.00068   23.6   2.7   49  132-180     6-62  (88)
 46 d1rutx3 g.39.1.3 (X:83-113) LI  40.6     4.8 0.00035   20.1   0.9   27  137-164     4-30  (31)
 47 d2akla2 g.41.3.5 (A:3-40) Hypo  40.1       8 0.00059   20.1   1.9   25  136-160     4-30  (38)
 48 d1x3ha1 g.39.1.3 (A:8-42) Leup  38.5     5.1 0.00037   20.5   0.9   27  135-164     8-34  (35)
 49 d1v6ga2 g.39.1.3 (A:42-81) Act  38.0     9.6  0.0007   19.7   1.9   28  137-165     2-29  (40)
 50 d2d8ya1 g.39.1.3 (A:9-43) Epli  37.4      11 0.00079   19.2   2.1   28  134-164     6-34  (35)
 51 d2dlqa3 g.37.1.1 (A:63-92) GLI  37.2       4 0.00029   19.6   0.3   11  135-145     4-14  (30)
 52 d2cura1 g.39.1.3 (A:33-63) Fou  36.2      22  0.0016   17.2   3.2   29  138-168     2-30  (31)
 53 d1wd2a_ g.44.1.1 (A:) Ariadne-  36.2     4.2  0.0003   23.4   0.3   38  134-171     5-47  (60)
 54 d1lkoa2 g.41.5.1 (A:148-191) R  35.2     7.9 0.00058   20.9   1.4   24  152-181    10-33  (44)
 55 d1nnqa2 g.41.5.1 (A:135-171) R  34.7     9.2 0.00067   19.7   1.6   23  152-181     7-29  (37)
 56 d2dlqa4 g.37.1.1 (A:8-34) GLI-  31.9      14   0.001   17.1   1.8   14  174-187     2-15  (27)
 57 d1x6aa1 g.39.1.3 (A:8-41) Lim   28.9      16  0.0012   18.3   1.8   28  134-164     7-34  (34)
 58 d2d8va1 g.43.1.1 (A:8-61) Zinc  25.9      20  0.0014   20.0   2.0   27  138-168     4-31  (54)
 59 d2gmga1 a.4.5.82 (A:1-105) Hyp  25.3       9 0.00066   24.7   0.6   32  149-185    66-97  (105)
 60 d1wfpa_ g.80.1.1 (A:) Zinc fin  24.4      42  0.0031   19.9   3.6   29  134-164    24-52  (74)
 61 d1g47a1 g.39.1.3 (A:1-35) Pinc  23.7      23  0.0017   17.7   1.9   30  134-164     6-35  (35)
 62 d2dara1 g.39.1.3 (A:53-84) PDZ  23.2      43  0.0032   16.4   3.2   30  138-169     2-31  (32)
 63 d1yuja_ g.37.1.1 (A:) GAGA fac  23.1      18  0.0013   19.5   1.5   10  174-183    26-35  (54)
 64 d1b8ta3 g.39.1.3 (A:101-143) C  22.6     9.6  0.0007   20.3   0.2   29  134-164    14-42  (43)
 65 d2drpa2 g.37.1.1 (A:140-165) T  21.3      15  0.0011   16.8   0.7   12  174-185     3-14  (26)
 66 d1x4ka1 g.39.1.3 (A:35-66) Fou  20.8      34  0.0025   16.8   2.1   29  138-168     2-30  (32)
 67 d1wyha1 g.39.1.3 (A:35-66) Fou  20.7      34  0.0025   16.7   2.1   29  138-168     2-30  (32)
 68 d1lv3a_ g.39.1.9 (A:) Hypothet  20.5      13 0.00093   21.7   0.5   10  174-183     8-17  (65)
 69 d1wfha_ g.80.1.1 (A:) Zinc fin  20.5      53  0.0038   18.8   3.3   29  134-164    14-42  (64)

No 1  
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.75  E-value=3.9e-19  Score=110.69  Aligned_cols=52  Identities=25%  Similarity=0.751  Sum_probs=44.9

Q ss_pred             ccCCCcccccccccCCCCCeeec-CCCCeeCHhhHHHHhccCCCCcccccccc
Q 029012          132 SEEEDTCPICLEEYDTENPKLIT-KCEHHFHLSCILEWNERSESCPICDQVCL  183 (200)
Q Consensus       132 ~~~~~~C~ICle~~~~~~~~~~l-~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~  183 (200)
                      .+++..|+||+++|..++.++.+ .|+|.||..||.+||+.+.+||+||+.|.
T Consensus         2 ~ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~   54 (55)
T d1iyma_           2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV   54 (55)
T ss_dssp             CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred             CCCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEeE
Confidence            35677899999999766666554 69999999999999999999999999875


No 2  
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.66  E-value=2.2e-17  Score=107.06  Aligned_cols=48  Identities=33%  Similarity=0.831  Sum_probs=43.6

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCCCCcccccccc
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSESCPICDQVCL  183 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~  183 (200)
                      ..+.|+||++.+  .++++.++|||.||..||.+|++.+.+||+||+++.
T Consensus         4 ~~d~C~IC~~~~--~~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~   51 (68)
T d1chca_           4 VAERCPICLEDP--SNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE   51 (68)
T ss_dssp             CCCCCSSCCSCC--CSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred             CCCCCccCCcCc--cCCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchH
Confidence            456799999999  567788999999999999999999999999999875


No 3  
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=4.8e-16  Score=105.65  Aligned_cols=53  Identities=26%  Similarity=0.565  Sum_probs=44.0

Q ss_pred             cCCCcccccccccCCCC---------------CeeecCCCCeeCHhhHHHHhccCCCCccccccccch
Q 029012          133 EEEDTCPICLEEYDTEN---------------PKLITKCEHHFHLSCILEWNERSESCPICDQVCLLQ  185 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~---------------~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~~~  185 (200)
                      ..++.|+||++.+....               .++.++|||.||..||.+||+.+.+||+||+++...
T Consensus        19 ~~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~   86 (88)
T d3dplr1          19 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQ   86 (88)
T ss_dssp             SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCEE
T ss_pred             CCCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCccccc
Confidence            34566999998884311               357889999999999999999999999999998764


No 4  
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.58  E-value=2.6e-16  Score=98.03  Aligned_cols=50  Identities=18%  Similarity=0.245  Sum_probs=45.4

Q ss_pred             CcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCCCCccccccccchhH
Q 029012          136 DTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSESCPICDQVCLLQLL  187 (200)
Q Consensus       136 ~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~~~~~  187 (200)
                      +.|+||++.+  .+|++...|||.||+.||.+|++.+++||+||+++..+++
T Consensus         1 l~C~Ic~~~~--~~Pv~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~~dL   50 (56)
T d2baya1           1 MLCAISGKVP--RRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEI   50 (56)
T ss_dssp             CCCTTTCSCC--SSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGC
T ss_pred             CCCccCCchH--HhcCccCCCCCcccHHHHHHHHhhccCCCccCCcCCHHhc
Confidence            3699999999  7997666899999999999999999999999999998754


No 5  
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57  E-value=2.3e-16  Score=106.51  Aligned_cols=61  Identities=30%  Similarity=0.587  Sum_probs=49.4

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccC-CCCccccccccchhHHhhhhhhhhcc
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERS-ESCPICDQVCLLQLLVCAISRCFFNS  198 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~-~tCP~CR~~l~~~~~~~~~~~~~~~~  198 (200)
                      +...|+||++.+  .+| ++++|||.||+.||.+|++.. .+||+||.++...++.. ..++|+|.
T Consensus        22 ~~l~C~IC~~~~--~~p-v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~l~~-P~~~~l~~   83 (86)
T d1rmda2          22 KSISCQICEHIL--ADP-VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLES-PVKSFLNI   83 (86)
T ss_dssp             HHTBCTTTCSBC--SSE-EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCBC-CCHHHHHH
T ss_pred             cCcCCccCCcch--hcc-eecCCCChhhHHHHHHHHhhCCCcCcccCCCCChhhccC-HHHHHHHH
Confidence            457899999999  788 588999999999999999754 58999999988665432 45566654


No 6  
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57  E-value=5.4e-16  Score=99.51  Aligned_cols=53  Identities=21%  Similarity=0.458  Sum_probs=42.6

Q ss_pred             CCCccccccccc--CCCCCeeecCCCCeeCHhhHHHHhcc-CCCCccccccccchh
Q 029012          134 EEDTCPICLEEY--DTENPKLITKCEHHFHLSCILEWNER-SESCPICDQVCLLQL  186 (200)
Q Consensus       134 ~~~~C~ICle~~--~~~~~~~~l~C~H~Fh~~CI~~Wl~~-~~tCP~CR~~l~~~~  186 (200)
                      ++..|+||++.+  .....+++++|||.||..||.+|+.. +.+||+||+.+...+
T Consensus         2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~~~   57 (65)
T d1g25a_           2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN   57 (65)
T ss_dssp             CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred             CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccccc
Confidence            467899999976  22334567899999999999999965 568999999987653


No 7  
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56  E-value=4.2e-16  Score=95.60  Aligned_cols=49  Identities=18%  Similarity=0.464  Sum_probs=40.3

Q ss_pred             CcccccccccCCCCC-eeecCCCCeeCHhhHHHHhccC-CCCccccccccc
Q 029012          136 DTCPICLEEYDTENP-KLITKCEHHFHLSCILEWNERS-ESCPICDQVCLL  184 (200)
Q Consensus       136 ~~C~ICle~~~~~~~-~~~l~C~H~Fh~~CI~~Wl~~~-~tCP~CR~~l~~  184 (200)
                      .+|+||++.|+..+. +..++|||.||..||.+|++.. .+||+||+++..
T Consensus         1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~   51 (52)
T d1ur6b_           1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE   51 (52)
T ss_dssp             CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred             CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence            369999999965443 3567999999999999999864 479999998864


No 8  
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56  E-value=1.2e-15  Score=101.62  Aligned_cols=48  Identities=29%  Similarity=0.659  Sum_probs=41.6

Q ss_pred             CCcccccccccCCCCCeeecCCCCeeCHhhHHHHhcc-CCCCccccccccch
Q 029012          135 EDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNER-SESCPICDQVCLLQ  185 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~-~~tCP~CR~~l~~~  185 (200)
                      ...|+||++.+  .++ ++++|||.||..||.+|++. +.+||+||+.|...
T Consensus        23 ~~~C~IC~~~~--~~~-~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~   71 (79)
T d1fbva4          23 FQLCKICAEND--KDV-KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT   71 (79)
T ss_dssp             TTBCTTTSSSB--CCE-ECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCC
T ss_pred             CCCCccCCCcC--CCe-EEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCC
Confidence            45699999999  566 68999999999999999974 56899999998754


No 9  
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54  E-value=2e-15  Score=107.22  Aligned_cols=52  Identities=33%  Similarity=0.668  Sum_probs=41.1

Q ss_pred             cCCCcccccccccCC---------------CCCeeecCCCCeeCHhhHHHHhccC-----CCCccccccccc
Q 029012          133 EEEDTCPICLEEYDT---------------ENPKLITKCEHHFHLSCILEWNERS-----ESCPICDQVCLL  184 (200)
Q Consensus       133 ~~~~~C~ICle~~~~---------------~~~~~~l~C~H~Fh~~CI~~Wl~~~-----~tCP~CR~~l~~  184 (200)
                      ..++.|+||++.+..               ...+.+++|||.||..||..||+.+     .+||+||..+..
T Consensus        23 ~~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~   94 (114)
T d1v87a_          23 APEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE   94 (114)
T ss_dssp             CCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred             cccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhcc
Confidence            346679999998732               1235688999999999999999854     389999997753


No 10 
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47  E-value=3.3e-15  Score=104.33  Aligned_cols=52  Identities=35%  Similarity=0.740  Sum_probs=44.4

Q ss_pred             cCCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCC---CCccccccccchhH
Q 029012          133 EEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSE---SCPICDQVCLLQLL  187 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~---tCP~CR~~l~~~~~  187 (200)
                      ++...|+||++.|  .+|+ .++|||.||..||.+|+....   .||+||+.+...++
T Consensus        19 ~~~l~CpIC~~~~--~~pv-~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~l   73 (103)
T d1jm7a_          19 QKILECPICLELI--KEPV-STKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL   73 (103)
T ss_dssp             HHHTSCSSSCCCC--SSCC-BCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTC
T ss_pred             ccCcCCCccCchh--CCeE-EcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhhC
Confidence            4567899999999  7884 789999999999999997654   89999999876554


No 11 
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44  E-value=6.1e-15  Score=91.57  Aligned_cols=46  Identities=26%  Similarity=0.533  Sum_probs=39.7

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCCCCccccccccch
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSESCPICDQVCLLQ  185 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~~~  185 (200)
                      +...|+||++.|  .++ ++++|||.||..||.+|   +.+||+||+.+...
T Consensus         5 ~~l~C~IC~~~~--~~p-~~lpCgH~fC~~Ci~~~---~~~CP~Cr~~~~~~   50 (56)
T d1bora_           5 QFLRCQQCQAEA--KCP-KLLPCLHTLCSGCLEAS---GMQCPICQAPWPLG   50 (56)
T ss_dssp             CCSSCSSSCSSC--BCC-SCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCC
T ss_pred             CCCCCcccCccc--CCC-EEecCCCHHhHHHHHcC---CCcCcCCCCcccCC
Confidence            456899999999  677 58899999999999876   66899999998754


No 12 
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41  E-value=9.4e-15  Score=100.85  Aligned_cols=51  Identities=27%  Similarity=0.593  Sum_probs=43.1

Q ss_pred             cCCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCCCCccccccccchhH
Q 029012          133 EEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSESCPICDQVCLLQLL  187 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~~~~~  187 (200)
                      ++...|+||++.|  .+|+.+++|||.||..||.+|+.  ..||+||..+...++
T Consensus        20 ~~~l~C~IC~~~~--~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~l   70 (97)
T d1jm7b_          20 EKLLRCSRCTNIL--REPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDL   70 (97)
T ss_dssp             HHTTSCSSSCSCC--SSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSC
T ss_pred             hhcCCCccCCchh--hcCceeCCCCCchhHHHHHHHHh--ccccccCCcCchhhC
Confidence            4567899999999  78976779999999999999985  469999998775543


No 13 
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.39  E-value=5.3e-14  Score=93.62  Aligned_cols=52  Identities=19%  Similarity=0.137  Sum_probs=45.2

Q ss_pred             cCCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhcc-CCCCccccccccchhH
Q 029012          133 EEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNER-SESCPICDQVCLLQLL  187 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~-~~tCP~CR~~l~~~~~  187 (200)
                      -+++.|+||++.+  .+| ++++|||.||+.||.+|+.. ..+||+||..+..+++
T Consensus         5 P~~l~CpIc~~l~--~dP-v~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~l   57 (80)
T d2c2la2           5 PDYLCGKISFELM--REP-CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQL   57 (80)
T ss_dssp             CSTTBCTTTCSBC--SSE-EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGC
T ss_pred             CccccCcCcCchh--hhh-cccCCcCeecHHHHHHHHhcCCccCCCcccccccccc
Confidence            3678899999999  899 58999999999999999975 4589999999886653


No 14 
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.36  E-value=9.3e-14  Score=91.95  Aligned_cols=52  Identities=29%  Similarity=0.525  Sum_probs=45.1

Q ss_pred             cCCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccC-CCCccccccccchhH
Q 029012          133 EEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERS-ESCPICDQVCLLQLL  187 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~-~tCP~CR~~l~~~~~  187 (200)
                      .+++.|+||++.+  .+|+ +++|||.||+.||.+|++.. ..||.|+..+..+.+
T Consensus         6 P~~l~CpIc~~~m--~dPV-~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~l   58 (78)
T d1t1ha_           6 PEYFRCPISLELM--KDPV-IVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGL   58 (78)
T ss_dssp             SSSSSCTTTSCCC--SSEE-EETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCC
T ss_pred             CccCCCcCcCchh--hCce-EccCCCcchHHHHHHHHHHCCCCCCcccccCCcccc
Confidence            4678999999999  8995 78999999999999999865 579999999876543


No 15 
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=99.30  E-value=4.8e-13  Score=84.03  Aligned_cols=50  Identities=32%  Similarity=0.628  Sum_probs=39.1

Q ss_pred             ccCCCcccccccccCCCCCeeecCC-----CCeeCHhhHHHHhcc--CCCCccccccccc
Q 029012          132 SEEEDTCPICLEEYDTENPKLITKC-----EHHFHLSCILEWNER--SESCPICDQVCLL  184 (200)
Q Consensus       132 ~~~~~~C~ICle~~~~~~~~~~l~C-----~H~Fh~~CI~~Wl~~--~~tCP~CR~~l~~  184 (200)
                      .++...|.||++.+  .++ ...+|     +|.||..||.+|+..  +.+||+||+.+..
T Consensus         3 ded~~~C~IC~~~~--~~~-~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~~   59 (60)
T d1vyxa_           3 DEDVPVCWICNEEL--GNE-RFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT   59 (60)
T ss_dssp             TCSCCEETTTTEEC--SCC-CCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred             CCCCCCCccCCccC--CCc-eeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeeec
Confidence            45678899999998  344 24444     599999999999964  5599999998753


No 16 
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21  E-value=2.7e-12  Score=88.44  Aligned_cols=52  Identities=13%  Similarity=0.060  Sum_probs=45.2

Q ss_pred             CCCcccccccccCCCCCeeecCCC-CeeCHhhHHHHhccCCCCccccccccchhHH
Q 029012          134 EEDTCPICLEEYDTENPKLITKCE-HHFHLSCILEWNERSESCPICDQVCLLQLLV  188 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~-H~Fh~~CI~~Wl~~~~tCP~CR~~l~~~~~~  188 (200)
                      +++.|+||++.+  .+|+ +++|+ |.|++.||.+||..+.+||+||+++..+.+.
T Consensus        21 ~~f~CPI~~~lm--~dPV-~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~~~L~   73 (98)
T d1wgma_          21 DEFLDPIMSTLM--CDPV-VLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIR   73 (98)
T ss_dssp             TTTBCTTTCSBC--SSEE-ECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSE
T ss_pred             HHhCCcCchhHH--HHHH-hcccccchhhHHHHHHHHHhcCCcccccccccchhhc
Confidence            579999999999  8995 77665 5899999999999999999999999876543


No 17 
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77  E-value=1.1e-09  Score=74.24  Aligned_cols=47  Identities=30%  Similarity=0.617  Sum_probs=37.5

Q ss_pred             cCCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccC--------CCCcccc
Q 029012          133 EEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERS--------ESCPICD  179 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~--------~tCP~CR  179 (200)
                      .....|+||++++...+...+++|+|.||..||..|++.+        -+||.|+
T Consensus         3 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~   57 (94)
T d1wima_           3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA   57 (94)
T ss_dssp             CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTT
T ss_pred             CCCCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCC
Confidence            3467899999999655655678999999999999999632        1699864


No 18 
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.98  E-value=0.0094  Score=34.32  Aligned_cols=44  Identities=25%  Similarity=0.649  Sum_probs=31.8

Q ss_pred             cccccccccCCCCCeeecCCCCeeCHhhHHHHhccCC----CCccccc
Q 029012          137 TCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSE----SCPICDQ  180 (200)
Q Consensus       137 ~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~----tCP~CR~  180 (200)
                      .|.||...-...+-+.--.|...||..|+..-+....    .||.||.
T Consensus         2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~   49 (51)
T d1f62a_           2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP   49 (51)
T ss_dssp             CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred             CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence            5889977654344444557899999999988765432    7999975


No 19 
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.35  E-value=0.018  Score=34.42  Aligned_cols=48  Identities=19%  Similarity=0.465  Sum_probs=33.9

Q ss_pred             cCCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhcc----CCCCcccccccc
Q 029012          133 EEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNER----SESCPICDQVCL  183 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~----~~tCP~CR~~l~  183 (200)
                      ..++.|.||.+.   ++-+.--.|.-.||..|+...+..    .-.||.|+....
T Consensus         7 ~~~~~C~~C~~~---g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~~   58 (61)
T d1mm2a_           7 HHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL   58 (61)
T ss_dssp             SSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred             CCcCCCcCCCCC---CeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCccc
Confidence            455679999864   344455578899999999766653    228999976543


No 20 
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.17  E-value=0.031  Score=34.32  Aligned_cols=47  Identities=26%  Similarity=0.598  Sum_probs=33.2

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCC----CCcccccccc
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSE----SCPICDQVCL  183 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~----tCP~CR~~l~  183 (200)
                      ....|.||.+.   ++-+.--.|...||..|+...+....    .||.|+....
T Consensus         6 ~c~~C~~C~~~---~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~   56 (70)
T d1fp0a1           6 SATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD   56 (70)
T ss_dssp             SSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred             CCCCCCCCCCc---CEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcCc
Confidence            34567777653   45555567999999999998775443    7999976543


No 21 
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.98  E-value=0.095  Score=33.01  Aligned_cols=36  Identities=22%  Similarity=0.548  Sum_probs=24.9

Q ss_pred             ccCCCcccccccccCCCCCeeecCCCCeeCHhhHHHH
Q 029012          132 SEEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEW  168 (200)
Q Consensus       132 ~~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~W  168 (200)
                      ...+..|.|| +.|......----|+..||..|+.+-
T Consensus        12 v~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~   47 (89)
T d1wila_          12 VVNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM   47 (89)
T ss_dssp             CCCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred             CCcCcccccc-CcccccceecceeecchhhHHHHHHh
Confidence            3567889999 77743332222336799999999986


No 22 
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=90.86  E-value=0.022  Score=34.25  Aligned_cols=49  Identities=27%  Similarity=0.563  Sum_probs=33.5

Q ss_pred             cCCCcccccccccCCCCC-eeecCCCCeeCHhhHHH---Hhc--cCCCCcccccc
Q 029012          133 EEEDTCPICLEEYDTENP-KLITKCEHHFHLSCILE---WNE--RSESCPICDQV  181 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~-~~~l~C~H~Fh~~CI~~---Wl~--~~~tCP~CR~~  181 (200)
                      .....|.||...+...+. +.--.|+..||..|+..   ...  ..-.||.|+..
T Consensus         4 ~~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~   58 (64)
T d1we9a_           4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK   58 (64)
T ss_dssp             SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred             CCCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence            345679999988755444 33557899999999852   211  23489999753


No 23 
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.48  E-value=0.067  Score=31.57  Aligned_cols=45  Identities=24%  Similarity=0.517  Sum_probs=32.4

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCCCCccc
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSESCPIC  178 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~C  178 (200)
                      ....|--|+..+.......-..|+++||.+|=.-.-+.-..||-|
T Consensus        14 ~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~fiHe~lh~CpgC   58 (59)
T d1z60a1          14 GERFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC   58 (59)
T ss_dssp             SCCEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred             CCCCccCCCCcCCCCceEECcCCCCccccccchhhhhhhcCCCCC
Confidence            356799999888433334567899999999954444455699987


No 24 
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.47  E-value=0.14  Score=31.35  Aligned_cols=42  Identities=24%  Similarity=0.507  Sum_probs=25.7

Q ss_pred             CCcccccccccCCCCCeeecC---C-CCeeCHhhHHHHhcc----CCCCcccccc
Q 029012          135 EDTCPICLEEYDTENPKLITK---C-EHHFHLSCILEWNER----SESCPICDQV  181 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~~~~l~---C-~H~Fh~~CI~~Wl~~----~~tCP~CR~~  181 (200)
                      ...| ||....  ....+...   | ...||..|+.  |..    .-.||.|+..
T Consensus        16 ~~~C-iC~~~~--~~~~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~   65 (71)
T d1wesa_          16 PTYC-LCNQVS--YGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD   65 (71)
T ss_dssp             CCCS-TTCCCC--CSSEECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred             CCEE-EeCCCC--CCCEEEEECCCCCCcCccCccCC--CCcCCCCcEECcCCccc
Confidence            3445 998765  23333342   3 3579999984  332    2389999764


No 25 
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.31  E-value=0.34  Score=29.51  Aligned_cols=46  Identities=26%  Similarity=0.526  Sum_probs=29.7

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhhHH------H---HhccCCCCccccc
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSCIL------E---WNERSESCPICDQ  180 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~------~---Wl~~~~tCP~CR~  180 (200)
                      +...| ||........-+.--.|.-.||..|+.      .   .......||.|+.
T Consensus        15 ~~~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~   69 (76)
T d1wema_          15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTI   69 (76)
T ss_dssp             TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred             CcCEE-ECCCccCCCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCcC
Confidence            44557 898776433333444688999999982      1   1123469999964


No 26 
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.91  E-value=0.68  Score=28.08  Aligned_cols=37  Identities=22%  Similarity=0.327  Sum_probs=27.3

Q ss_pred             CCCcccccccccCCCCCeeecC--CCCeeCHhhHHHHhcc
Q 029012          134 EEDTCPICLEEYDTENPKLITK--CEHHFHLSCILEWNER  171 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~--C~H~Fh~~CI~~Wl~~  171 (200)
                      ....|.+|.+.++...-+ .-|  =+|.||.-|-...++.
T Consensus         7 ~~l~CtlC~erLEdtHFV-QCPsv~~HkFCFpCsr~sik~   45 (80)
T d2cs3a1           7 GPLCCTICHERLEDTHFV-QCPSVPSHKFCFPCSRESIKA   45 (80)
T ss_dssp             CSCCCSSSCSCCSSTTSE-ECSSCSSCEECHHHHHHHHHH
T ss_pred             CceeeeeehhhhcCCceE-eCCCCcCCceeccccHHHHHh
Confidence            457899999999544442 222  2699999999998874


No 27 
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.47  E-value=0.12  Score=32.84  Aligned_cols=50  Identities=18%  Similarity=0.333  Sum_probs=31.8

Q ss_pred             cCCCcccccccccCCC-CC-eeecCCCCeeCHhhHHHHhc-----c---CCCCccccccc
Q 029012          133 EEEDTCPICLEEYDTE-NP-KLITKCEHHFHLSCILEWNE-----R---SESCPICDQVC  182 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~-~~-~~~l~C~H~Fh~~CI~~Wl~-----~---~~tCP~CR~~l  182 (200)
                      +....|.||....... +. +.--.|...||..|+...+.     .   .-.||.|....
T Consensus        14 ~~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~   73 (88)
T d1weva_          14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM   73 (88)
T ss_dssp             HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred             cCcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCchH
Confidence            3456799998754322 22 22446889999999764332     1   33799996543


No 28 
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=79.41  E-value=0.75  Score=28.20  Aligned_cols=47  Identities=26%  Similarity=0.598  Sum_probs=30.4

Q ss_pred             cCCCcccccccccCCCCCeeec---CCCCeeCHhhHHH----H--hc---cCCCCcccccc
Q 029012          133 EEEDTCPICLEEYDTENPKLIT---KCEHHFHLSCILE----W--NE---RSESCPICDQV  181 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l---~C~H~Fh~~CI~~----W--l~---~~~tCP~CR~~  181 (200)
                      ++...| ||-.....+.. +..   .|...||..|+.-    +  ..   ....||.|+..
T Consensus        14 ~~~~~C-~C~~~~~~~~~-i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~   72 (78)
T d1wewa_          14 EIKVRC-VCGNSLETDSM-IQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT   72 (78)
T ss_dssp             CCCCCC-SSCCCCCCSCE-EECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred             CCccEe-ECCCccCCCcE-EEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCc
Confidence            344567 99887743333 455   4999999999831    1  11   13589999754


No 29 
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.42  E-value=0.12  Score=29.51  Aligned_cols=44  Identities=16%  Similarity=0.580  Sum_probs=28.3

Q ss_pred             cccccccccCCCCC-eeecCCCCeeCHhhHHHHhccCCCCccccc
Q 029012          137 TCPICLEEYDTENP-KLITKCEHHFHLSCILEWNERSESCPICDQ  180 (200)
Q Consensus       137 ~C~ICle~~~~~~~-~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~  180 (200)
                      .|.+|...|..... -.--.||+.||..|....-.....|..|.+
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C~~   46 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   46 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhHhh
Confidence            48889888843222 234579999999997665555567777743


No 30 
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=75.47  E-value=2.5  Score=26.38  Aligned_cols=51  Identities=20%  Similarity=0.433  Sum_probs=36.7

Q ss_pred             cCCCcccccccccC---CCCC-eeecCCCCeeCHhhHH-HHhccCCCCcccccccc
Q 029012          133 EEEDTCPICLEEYD---TENP-KLITKCEHHFHLSCIL-EWNERSESCPICDQVCL  183 (200)
Q Consensus       133 ~~~~~C~ICle~~~---~~~~-~~~l~C~H~Fh~~CI~-~Wl~~~~tCP~CR~~l~  183 (200)
                      .....|-||=+.+.   .+++ +..-.|+--.|+.|.. ++-+-+..||.|+..+.
T Consensus        14 ~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Yk   69 (93)
T d1weoa_          14 LDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK   69 (93)
T ss_dssp             CSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred             cccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhh
Confidence            45677999999882   2333 2334688889999985 44456779999988765


No 31 
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=75.40  E-value=0.35  Score=27.39  Aligned_cols=40  Identities=23%  Similarity=0.487  Sum_probs=23.5

Q ss_pred             CcccccccccCCCCCeeecC----CCCeeCHhhHHHHhcc----CCCCccccc
Q 029012          136 DTCPICLEEYDTENPKLITK----CEHHFHLSCILEWNER----SESCPICDQ  180 (200)
Q Consensus       136 ~~C~ICle~~~~~~~~~~l~----C~H~Fh~~CI~~Wl~~----~~tCP~CR~  180 (200)
                      ..| ||.....  +..+.-.    |.--||..|+.  |..    .-.||.|++
T Consensus         3 ~yC-~C~~~~~--~~mi~Cd~~~C~~~WfH~~Cvg--l~~~p~~~w~C~~C~~   50 (51)
T d2pnxa1           3 TYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ   50 (51)
T ss_dssp             EET-TTTEECC--SEEEECSCTTCSSCEEEGGGGT--CSSCCSSCCCCHHHHC
T ss_pred             cEE-EcCCCCC--CCEEEEecCCCCCCCEeCCccC--CCcCCCCcEECcCCCC
Confidence            357 7877652  2223322    24579999985  332    227888875


No 32 
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=73.99  E-value=0.56  Score=28.87  Aligned_cols=12  Identities=25%  Similarity=0.814  Sum_probs=10.8

Q ss_pred             eeCHhhHHHHhc
Q 029012          159 HFHLSCILEWNE  170 (200)
Q Consensus       159 ~Fh~~CI~~Wl~  170 (200)
                      .||+.|+.+|+.
T Consensus        39 GFCRNCLskWy~   50 (79)
T d2o35a1          39 GFCRNCLSNWYR   50 (79)
T ss_dssp             SCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            499999999986


No 33 
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.07  E-value=3.9  Score=24.75  Aligned_cols=47  Identities=26%  Similarity=0.468  Sum_probs=30.2

Q ss_pred             CcccccccccCCCCC-eeecCCCCeeCHhhHH--HH-hc--cCCCCccccccc
Q 029012          136 DTCPICLEEYDTENP-KLITKCEHHFHLSCIL--EW-NE--RSESCPICDQVC  182 (200)
Q Consensus       136 ~~C~ICle~~~~~~~-~~~l~C~H~Fh~~CI~--~W-l~--~~~tCP~CR~~l  182 (200)
                      ..+.||...+..... +.--.|.-.||..|+.  .. ..  ....||.|+...
T Consensus        12 pv~CiC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~   64 (79)
T d1wepa_          12 PVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF   64 (79)
T ss_dssp             CCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred             CeEeECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCc
Confidence            344499987743332 3345789999999984  11 11  235899998754


No 34 
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=71.86  E-value=0.082  Score=32.29  Aligned_cols=41  Identities=34%  Similarity=0.476  Sum_probs=27.4

Q ss_pred             CCcccccccccCCCCCeeecCCCCeeCHhhHHHHhccCCCCcccccccc
Q 029012          135 EDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSESCPICDQVCL  183 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~  183 (200)
                      +..||.|..+++..+       ||.+|..|-.. ++....||-|.++|.
T Consensus         2 ~~~CP~C~~eL~~~~-------~~~~C~~C~~~-~~~~a~CPdC~~~Le   42 (71)
T d2jnea1           2 ELHCPQCQHVLDQDN-------GHARCRSCGEF-IEMKALCPDCHQPLQ   42 (71)
T ss_dssp             CCBCSSSCSBEEEET-------TEEEETTTCCE-EEEEEECTTTCSBCE
T ss_pred             CCcCCCccCcccccC-------CCEehhhhhhh-heeEEeCCccccHHH
Confidence            467999998873211       56677777433 244558999998876


No 35 
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=70.65  E-value=1.1  Score=30.01  Aligned_cols=52  Identities=19%  Similarity=0.414  Sum_probs=33.7

Q ss_pred             cccCCCcccccccccCC-CC-CeeecCCCCeeCHhhHHHHhcc----CCCCccccccc
Q 029012          131 ASEEEDTCPICLEEYDT-EN-PKLITKCEHHFHLSCILEWNER----SESCPICDQVC  182 (200)
Q Consensus       131 ~~~~~~~C~ICle~~~~-~~-~~~~l~C~H~Fh~~CI~~Wl~~----~~tCP~CR~~l  182 (200)
                      .......|.+|...|.. .. ...-..||+.||..|-..-...    ...|-+|.+..
T Consensus        44 ~~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k~r  101 (124)
T d1zbdb_          44 AGDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQR  101 (124)
T ss_dssp             CSCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHHH
T ss_pred             hccCCCcCcccCCcccCCCCCCCcCccCCcccccCCCCCccCCCCCCCEECccCcchH
Confidence            34556779999998843 22 2356789999999995321111    13788886643


No 36 
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=70.51  E-value=0.3  Score=29.59  Aligned_cols=46  Identities=20%  Similarity=0.259  Sum_probs=29.2

Q ss_pred             CCcccccccccCCCCC-eeecCCCCeeCHhhHHHH----hccCCCCcccccc
Q 029012          135 EDTCPICLEEYDTENP-KLITKCEHHFHLSCILEW----NERSESCPICDQV  181 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~-~~~l~C~H~Fh~~CI~~W----l~~~~tCP~CR~~  181 (200)
                      ...| ||.......+. +.--.|...||..|+..-    ......||.|+..
T Consensus        16 ~~~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~   66 (72)
T d1weea_          16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL   66 (72)
T ss_dssp             EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred             eEEe-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCc
Confidence            3457 78876644433 344578899999997431    1234489999654


No 37 
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=65.75  E-value=2.1  Score=25.72  Aligned_cols=34  Identities=21%  Similarity=0.407  Sum_probs=24.7

Q ss_pred             CCcccccccccCCCCC-eeecCCCCeeCHhhHHHH
Q 029012          135 EDTCPICLEEYDTENP-KLITKCEHHFHLSCILEW  168 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~-~~~l~C~H~Fh~~CI~~W  168 (200)
                      ...|.+|...|..-.. -.--.||+.||..|...+
T Consensus        13 ~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~~   47 (72)
T d1dvpa2          13 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ   47 (72)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred             CCccccCCCcccCccccccccccCCeeChhhhCCc
Confidence            4569999999943222 245579999999997544


No 38 
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.93  E-value=3.3  Score=24.10  Aligned_cols=37  Identities=16%  Similarity=0.392  Sum_probs=26.1

Q ss_pred             cCCCcccccccccCCCCCe-eecCCCCeeCHhhHHHHh
Q 029012          133 EEEDTCPICLEEYDTENPK-LITKCEHHFHLSCILEWN  169 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~-~~l~C~H~Fh~~CI~~Wl  169 (200)
                      ++...|.+|...|..-... ---.||+.||..|...++
T Consensus         6 ~~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~~~   43 (64)
T d1joca1           6 NEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNA   43 (64)
T ss_dssp             GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred             ccCCcCcCcCCcccCCccccchhhhCCeecccccCCce
Confidence            3456799999999433322 345799999999976544


No 39 
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.78  E-value=3.3  Score=24.34  Aligned_cols=35  Identities=23%  Similarity=0.345  Sum_probs=24.5

Q ss_pred             CCcccccccccCCCCCe-eecCCCCeeCHhhHHHHh
Q 029012          135 EDTCPICLEEYDTENPK-LITKCEHHFHLSCILEWN  169 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~~-~~l~C~H~Fh~~CI~~Wl  169 (200)
                      +..|.+|...|..-... ---.||..||..|...++
T Consensus         5 ~~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~   40 (67)
T d1vfya_           5 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSI   40 (67)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEE
T ss_pred             CcccccCCCcccCcccccccccCCCEecccccCCcE
Confidence            35699999998432221 334799999999976543


No 40 
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.62  E-value=1.5  Score=22.65  Aligned_cols=27  Identities=15%  Similarity=0.536  Sum_probs=20.9

Q ss_pred             CCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          135 EDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      -..|.+|.+.+  -+. ++--.|-.||-.|
T Consensus         8 lEkC~~C~~~I--~dr-iLrA~Gk~yHP~C   34 (35)
T d2dloa1           8 LEKCATCSQPI--LDR-ILRAMGKAYHPGC   34 (35)
T ss_dssp             CCBCTTTCCBC--CSC-CEEETTEEECTTT
T ss_pred             HHHHHHhchHH--HHH-HHHHhCCCCCCCC
Confidence            35699999998  555 4667888888777


No 41 
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.96  E-value=2.1  Score=21.06  Aligned_cols=14  Identities=29%  Similarity=0.527  Sum_probs=9.6

Q ss_pred             CCCccccccccchh
Q 029012          173 ESCPICDQVCLLQL  186 (200)
Q Consensus       173 ~tCP~CR~~l~~~~  186 (200)
                      ..||+|.+.+...+
T Consensus         4 ~~cpic~qrfkrkd   17 (32)
T d2epqa1           4 YSCPVCGLRFKRKD   17 (32)
T ss_dssp             SEETTTTEECSCHH
T ss_pred             cccchHHHHhhccc
Confidence            36888877777554


No 42 
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.41  E-value=0.88  Score=27.51  Aligned_cols=37  Identities=22%  Similarity=0.563  Sum_probs=24.4

Q ss_pred             CCccccccccc--CCCCCe-eecCCCCeeCHhhHHHHhcc
Q 029012          135 EDTCPICLEEY--DTENPK-LITKCEHHFHLSCILEWNER  171 (200)
Q Consensus       135 ~~~C~ICle~~--~~~~~~-~~l~C~H~Fh~~CI~~Wl~~  171 (200)
                      -.-|+-|-..+  +.+.+. +-..||+.||..|-..|-..
T Consensus        18 ~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w~~~   57 (73)
T d2ct7a1          18 FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQ   57 (73)
T ss_dssp             EECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCTT
T ss_pred             CCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcchhcC
Confidence            45577776544  223333 34489999999999998443


No 43 
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.73  E-value=1.9  Score=23.13  Aligned_cols=29  Identities=17%  Similarity=0.372  Sum_probs=21.4

Q ss_pred             cCCCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          133 EEEDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       133 ~~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      .-...|..|.+.+  .-+ ++.-=+|.||..|
T Consensus        13 ~fG~~C~~C~~~I--tG~-V~~Ag~~~yHP~C   41 (41)
T d1v6ga1          13 LYGTRCFSCDQFI--EGE-VVSALGKTYHPDC   41 (41)
T ss_dssp             SCCCBCTTTCCBC--CSC-CEEETTEEECTTT
T ss_pred             HhCcccccccCEe--eee-eeEecCcccCCCC
Confidence            3467799999988  455 3555568999887


No 44 
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.41  E-value=4.2  Score=21.03  Aligned_cols=28  Identities=32%  Similarity=0.586  Sum_probs=19.5

Q ss_pred             CCCcccccccccCCCCCe-eecCCCCeeCHhh
Q 029012          134 EEDTCPICLEEYDTENPK-LITKCEHHFHLSC  164 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~-~~l~C~H~Fh~~C  164 (200)
                      ..+.|.+|....   -++ .+.-=|+.||+.|
T Consensus         7 ~~~~C~~C~K~V---Y~~Erl~a~g~~yHk~C   35 (36)
T d2co8a2           7 AGDLCALCGEHL---YVLERLCVNGHFFHRSC   35 (36)
T ss_dssp             SSCBCSSSCCBC---CTTTBCCBTTBCCBTTT
T ss_pred             CCCcccccCCEE---eeeeEEEecCcEecccc
Confidence            467899998765   233 2344578999988


No 45 
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=41.10  E-value=9.4  Score=23.59  Aligned_cols=49  Identities=18%  Similarity=0.330  Sum_probs=33.3

Q ss_pred             ccCCCcccccccccCCCCCe-eecCCCCeeCHhhHHHHhcc-------CCCCccccc
Q 029012          132 SEEEDTCPICLEEYDTENPK-LITKCEHHFHLSCILEWNER-------SESCPICDQ  180 (200)
Q Consensus       132 ~~~~~~C~ICle~~~~~~~~-~~l~C~H~Fh~~CI~~Wl~~-------~~tCP~CR~  180 (200)
                      ...+..|.+|...|...+.. ---.||-+||..|...++..       ...|-.|-.
T Consensus         6 ~~~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~RVC~~C~~   62 (88)
T d1wfka_           6 SGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHT   62 (88)
T ss_dssp             CCCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHH
T ss_pred             CcccCcCcccCchhccccccccccccChhhChHHhCCccccCCCCCCCCeECHHHHH
Confidence            34567799999999543332 34479999999998766542       125777743


No 46 
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.58  E-value=4.8  Score=20.08  Aligned_cols=27  Identities=19%  Similarity=0.557  Sum_probs=19.1

Q ss_pred             cccccccccCCCCCeeecCCCCeeCHhh
Q 029012          137 TCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       137 ~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      .|+-|...+...+- ++--=++.||..|
T Consensus         4 ~Ca~C~~~I~~~e~-VmRA~~~VyHl~C   30 (31)
T d1rutx3           4 ACSACGQSIPASEL-VMRAQGNVYHLKC   30 (31)
T ss_dssp             ECTTTCCEECTTSE-EEEETTEEECGGG
T ss_pred             ccccccCcCChhHh-heecccceeeecc
Confidence            48888888865444 3444578899988


No 47 
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.07  E-value=8  Score=20.13  Aligned_cols=25  Identities=28%  Similarity=0.729  Sum_probs=17.0

Q ss_pred             CcccccccccC--CCCCeeecCCCCee
Q 029012          136 DTCPICLEEYD--TENPKLITKCEHHF  160 (200)
Q Consensus       136 ~~C~ICle~~~--~~~~~~~l~C~H~F  160 (200)
                      -.|+-|..+|.  .+.-.+-..|+|-+
T Consensus         4 P~CP~C~seytYedg~l~vCPeC~hEW   30 (38)
T d2akla2           4 PPCPQCNSEYTYEDGALLVCPECAHEW   30 (38)
T ss_dssp             CCCTTTCCCCCEECSSSEEETTTTEEE
T ss_pred             CcCCCCCCcceEcCCCEEECCcccCcC
Confidence            35999999883  34555666777754


No 48 
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.53  E-value=5.1  Score=20.46  Aligned_cols=27  Identities=15%  Similarity=0.395  Sum_probs=20.3

Q ss_pred             CCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          135 EDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       135 ~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      ...|..|...+  ... ++.--|..||.+|
T Consensus         8 apkC~~C~~~I--~g~-~v~Al~~~wHpeC   34 (35)
T d1x3ha1           8 SPKCGGCNRPV--LEN-YLSAMDTVWHPEC   34 (35)
T ss_dssp             SCBCTTTCCBC--CSS-CEEETTEEECTTT
T ss_pred             ChhhhhcCCcc--cch-heeecCCccCccc
Confidence            45699999988  344 4666788899887


No 49 
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.96  E-value=9.6  Score=19.73  Aligned_cols=28  Identities=11%  Similarity=0.347  Sum_probs=18.5

Q ss_pred             cccccccccCCCCCeeecCCCCeeCHhhH
Q 029012          137 TCPICLEEYDTENPKLITKCEHHFHLSCI  165 (200)
Q Consensus       137 ~C~ICle~~~~~~~~~~l~C~H~Fh~~CI  165 (200)
                      .|++|...|-.++.+ ...=.-..|+.|.
T Consensus         2 vC~vCr~pFP~GDRV-TFnGKeC~CQ~Cs   29 (40)
T d1v6ga2           2 VCAVCRLPFPPGDRV-TFNGKECMCQKCS   29 (40)
T ss_dssp             SCSSSCCCCCSSSCE-EEETTEEEEHHHH
T ss_pred             cccccCCCCCCCCeE-EEcCceeehhhcC
Confidence            699999999777774 4433344556654


No 50 
>d2d8ya1 g.39.1.3 (A:9-43) Eplin, LIMA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.42  E-value=11  Score=19.21  Aligned_cols=28  Identities=29%  Similarity=0.653  Sum_probs=19.2

Q ss_pred             CCCcccccccccCCCCCe-eecCCCCeeCHhh
Q 029012          134 EEDTCPICLEEYDTENPK-LITKCEHHFHLSC  164 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~-~~l~C~H~Fh~~C  164 (200)
                      ..+.|.+|....   -++ .+.-=|+.||+.|
T Consensus         6 ~~~kC~~C~K~V---Y~~E~~~a~g~~~Hk~C   34 (35)
T d2d8ya1           6 ARETCVECQKTV---YPMERLLANQQVFHISC   34 (35)
T ss_dssp             SSCBCTTTCCBC---CTTSEEECSSSEEETTT
T ss_pred             CCcccccCCCEE---eeeeeEecCCeehhhcc
Confidence            456799998765   233 3444588999988


No 51 
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.18  E-value=4  Score=19.58  Aligned_cols=11  Identities=36%  Similarity=0.896  Sum_probs=6.8

Q ss_pred             CCccccccccc
Q 029012          135 EDTCPICLEEY  145 (200)
Q Consensus       135 ~~~C~ICle~~  145 (200)
                      ...|.+|++.|
T Consensus         4 vftcs~cqe~f   14 (30)
T d2dlqa3           4 VFTCSVCQETF   14 (30)
T ss_dssp             CEECSSSCCEE
T ss_pred             eEEeHHHHHHH
Confidence            45566666666


No 52 
>d2cura1 g.39.1.3 (A:33-63) Four and a half LIM domains protein 1, FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.20  E-value=22  Score=17.23  Aligned_cols=29  Identities=10%  Similarity=0.485  Sum_probs=20.2

Q ss_pred             ccccccccCCCCCeeecCCCCeeCHhhHHHH
Q 029012          138 CPICLEEYDTENPKLITKCEHHFHLSCILEW  168 (200)
Q Consensus       138 C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~W  168 (200)
                      |.-|-..+  .......--.|.||-+|.+..
T Consensus         2 C~~C~K~L--ag~rFTa~eDq~yCVdCYK~~   30 (31)
T d2cura1           2 CVTCSKKL--AGQRFTAVEDQYYCVDCYKNF   30 (31)
T ss_dssp             CTTTCCBC--TTSCEEECSSCEEEHHHHHHH
T ss_pred             cccccchh--cCceeEEecceEEEeeeeccc
Confidence            67777777  333355666789999998754


No 53 
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.17  E-value=4.2  Score=23.45  Aligned_cols=38  Identities=21%  Similarity=0.601  Sum_probs=24.1

Q ss_pred             CCCcccccccccCC---CCCeeec--CCCCeeCHhhHHHHhcc
Q 029012          134 EEDTCPICLEEYDT---ENPKLIT--KCEHHFHLSCILEWNER  171 (200)
Q Consensus       134 ~~~~C~ICle~~~~---~~~~~~l--~C~H~Fh~~CI~~Wl~~  171 (200)
                      ....|+-|...+.-   -+-+.-+  .||+.||..|...|-..
T Consensus         5 ntK~CP~C~~~ieK~~GCnhM~C~~~~C~~~fCw~C~~~~~~~   47 (60)
T d1wd2a_           5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPH   47 (60)
T ss_dssp             CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGGG
T ss_pred             cCcCCCCCCCeEEECCCCCCeEeCCCCCCCeEECCCCCccccC
Confidence            45679999887732   1122222  37888888888777543


No 54 
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=35.19  E-value=7.9  Score=20.86  Aligned_cols=24  Identities=21%  Similarity=0.426  Sum_probs=15.6

Q ss_pred             eecCCCCeeCHhhHHHHhccCCCCcccccc
Q 029012          152 LITKCEHHFHLSCILEWNERSESCPICDQV  181 (200)
Q Consensus       152 ~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~  181 (200)
                      +-+.|||++-..      +.-..||+|..+
T Consensus        10 ~C~~CGyi~~g~------~aP~~CPvC~~p   33 (44)
T d1lkoa2          10 RCRNCGYVHEGT------GAPELCPACAHP   33 (44)
T ss_dssp             EETTTCCEEEEE------ECCSBCTTTCCB
T ss_pred             EcCCCCcEEECC------CCCCcCCCCCCc
Confidence            456788876532      234589999775


No 55 
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=34.67  E-value=9.2  Score=19.74  Aligned_cols=23  Identities=26%  Similarity=0.530  Sum_probs=13.7

Q ss_pred             eecCCCCeeCHhhHHHHhccCCCCcccccc
Q 029012          152 LITKCEHHFHLSCILEWNERSESCPICDQV  181 (200)
Q Consensus       152 ~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~  181 (200)
                      +-..|||++-.       +.-..||+|..+
T Consensus         7 ~C~vCG~i~~g-------~~P~~CPvCg~~   29 (37)
T d1nnqa2           7 ICPICGYTAVD-------EAPEYCPVCGAP   29 (37)
T ss_dssp             ECTTTCCEEES-------CCCSBCTTTCCB
T ss_pred             ECCCCCCEecC-------CCCCcCCCCCCc
Confidence            34556776542       223479999764


No 56 
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.91  E-value=14  Score=17.11  Aligned_cols=14  Identities=29%  Similarity=0.785  Sum_probs=10.2

Q ss_pred             CCccccccccchhH
Q 029012          174 SCPICDQVCLLQLL  187 (200)
Q Consensus       174 tCP~CR~~l~~~~~  187 (200)
                      .||.|.+.+...-.
T Consensus         2 qcp~c~k~f~skyy   15 (27)
T d2dlqa4           2 ECPTCHKKFLSKYY   15 (27)
T ss_dssp             CCTTTCCCCSSHHH
T ss_pred             cCcchHHHHHHhHh
Confidence            58999888776543


No 57 
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.88  E-value=16  Score=18.26  Aligned_cols=28  Identities=21%  Similarity=0.476  Sum_probs=20.9

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      -...|-.|-+.+  .-| ++.-=.|.||-+|
T Consensus         7 fge~C~~C~~~i--tGp-vMvAG~~K~HPEC   34 (34)
T d1x6aa1           7 FGEFCHGCSLLM--TGP-FMVAGEFKYHPEC   34 (34)
T ss_dssp             SSCBCTTTCCBC--CSC-CBCCTTCCBCTTS
T ss_pred             HHHHhhhhHhhc--ccc-eeeecccccCCCC
Confidence            356799998877  456 4666779999877


No 58 
>d2d8va1 g.43.1.1 (A:8-61) Zinc finger FYVE domain-containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.87  E-value=20  Score=20.01  Aligned_cols=27  Identities=26%  Similarity=0.503  Sum_probs=19.4

Q ss_pred             ccccccccCCCCCeeecCC-CCeeCHhhHHHH
Q 029012          138 CPICLEEYDTENPKLITKC-EHHFHLSCILEW  168 (200)
Q Consensus       138 C~ICle~~~~~~~~~~l~C-~H~Fh~~CI~~W  168 (200)
                      |.||.+.-    .+.-.-| |-.||..|..+-
T Consensus         4 C~ICneDA----~lrC~gCdgdLyC~rC~rE~   31 (54)
T d2d8va1           4 CCICNEDA----TLRCAGCDGDLYCARCFREG   31 (54)
T ss_dssp             CTTTCSCC----CEEETTTTSEEECSSHHHHH
T ss_pred             eEEecCCC----ceEecCCCCceehHHHHHHh
Confidence            88998853    3456667 478999997664


No 59 
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=25.35  E-value=9  Score=24.66  Aligned_cols=32  Identities=22%  Similarity=0.462  Sum_probs=22.2

Q ss_pred             CCeeecCCCCeeCHhhHHHHhccCCCCccccccccch
Q 029012          149 NPKLITKCEHHFHLSCILEWNERSESCPICDQVCLLQ  185 (200)
Q Consensus       149 ~~~~~l~C~H~Fh~~CI~~Wl~~~~tCP~CR~~l~~~  185 (200)
                      .|....+||-.|-     .-++.-..||.|+......
T Consensus        66 ~Pp~CrkCGfvFr-----~~~kkPSRCP~CKSE~Ie~   97 (105)
T d2gmga1          66 KPAQCRKCGFVFK-----AEINIPSRCPKCKSEWIEE   97 (105)
T ss_dssp             CCCBBTTTCCBCC-----CCSSCCSSCSSSCCCCBCC
T ss_pred             eChhhhhcCCeec-----ccCCCCCCCCCCCCccccC
Confidence            3446778888882     2245566999999887654


No 60 
>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.38  E-value=42  Score=19.87  Aligned_cols=29  Identities=14%  Similarity=0.319  Sum_probs=21.4

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      ....|.+|-..+.  -....-.||+.||...
T Consensus        24 kk~RC~~C~KKl~--l~~~~CrCg~~FC~~H   52 (74)
T d1wfpa_          24 TATRCLSCNKKVG--VTGFKCRCGSTFCGTH   52 (74)
T ss_dssp             CCCBCSSSCCBCT--TTCEECTTSCEECTTT
T ss_pred             CCCcChhcCCccC--CCceecCCCChhhhcc
Confidence            3567999988773  3335678999999765


No 61 
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.67  E-value=23  Score=17.72  Aligned_cols=30  Identities=17%  Similarity=0.462  Sum_probs=20.7

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      ....|.-|.+.|++.+.+ +-.=|-.+|..|
T Consensus         6 ~~~~C~RC~~gF~p~Eki-VNSnGEl~H~qC   35 (35)
T d1g47a1           6 ASATCERCKGGFAPAEKI-VNSNGELYHEQC   35 (35)
T ss_dssp             CCCBCSSSCCBCCSTTTC-EEETTEEECTTT
T ss_pred             HHHHHHHHccCCCchHHh-hcCCCccccccC
Confidence            456799999999877774 444466666655


No 62 
>d2dara1 g.39.1.3 (A:53-84) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.16  E-value=43  Score=16.36  Aligned_cols=30  Identities=10%  Similarity=0.257  Sum_probs=17.1

Q ss_pred             ccccccccCCCCCeeecCCCCeeCHhhHHHHh
Q 029012          138 CPICLEEYDTENPKLITKCEHHFHLSCILEWN  169 (200)
Q Consensus       138 C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~Wl  169 (200)
                      |+-|...+  .+-..+-.=|-.||..|..++|
T Consensus         2 Ca~C~~sL--~d~gFVEE~g~lYCe~Cye~ff   31 (32)
T d2dara1           2 CAHCKNTM--AYIGFVEEKGALYCELCYEKFF   31 (32)
T ss_dssp             CSSSCCBC--SSSCBEESSSCEECHHHHHHHT
T ss_pred             cccccccH--hhcceeeecCcEeHHHHHHHhc
Confidence            55565555  2333444456667777777654


No 63 
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}
Probab=23.06  E-value=18  Score=19.51  Aligned_cols=10  Identities=50%  Similarity=1.105  Sum_probs=5.0

Q ss_pred             CCcccccccc
Q 029012          174 SCPICDQVCL  183 (200)
Q Consensus       174 tCP~CR~~l~  183 (200)
                      +||+|-..+.
T Consensus        26 tcpic~avir   35 (54)
T d1yuja_          26 TCPICYAVIR   35 (54)
T ss_dssp             ECTTTCCEES
T ss_pred             CCchHHHHHH
Confidence            4555544443


No 64 
>d1b8ta3 g.39.1.3 (A:101-143) Cysteine-rich (intestinal) protein, CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.64  E-value=9.6  Score=20.33  Aligned_cols=29  Identities=24%  Similarity=0.555  Sum_probs=19.5

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      ..+.|..|-...=.-+.  ++-=|+.||+.|
T Consensus        14 ~~~kC~~C~k~VY~~E~--~~~~g~~~Hk~C   42 (43)
T d1b8ta3          14 GSDGCPRCGQAVYAAEK--VIGAGKSWHKSC   42 (43)
T ss_dssp             CCEECTTTSCEECSSSC--EEETTEEECTTT
T ss_pred             CCCcCccCCCEeeHHHH--hhcCCCccccCC
Confidence            35779999766522233  444689999988


No 65 
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=21.35  E-value=15  Score=16.83  Aligned_cols=12  Identities=25%  Similarity=0.675  Sum_probs=8.0

Q ss_pred             CCccccccccch
Q 029012          174 SCPICDQVCLLQ  185 (200)
Q Consensus       174 tCP~CR~~l~~~  185 (200)
                      -||+|-+.+...
T Consensus         3 pcp~cfkeftrk   14 (26)
T d2drpa2           3 PCPFCFKEFTRK   14 (26)
T ss_dssp             ECTTTCCEESCH
T ss_pred             CCchhhHHhccc
Confidence            378887776644


No 66 
>d1x4ka1 g.39.1.3 (A:35-66) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.79  E-value=34  Score=16.78  Aligned_cols=29  Identities=21%  Similarity=0.477  Sum_probs=20.5

Q ss_pred             ccccccccCCCCCeeecCCCCeeCHhhHHHH
Q 029012          138 CPICLEEYDTENPKLITKCEHHFHLSCILEW  168 (200)
Q Consensus       138 C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~W  168 (200)
                      |..|...+  +..-.+..=++.||..|..+-
T Consensus         2 C~~C~qPI--Gtksfipk~~~~yCvpCyE~k   30 (32)
T d1x4ka1           2 CHRCQQPI--GTKSFIPKDNQNFCVPCYEKQ   30 (32)
T ss_dssp             CSSSCCCC--CSSSEEEETTEEEEHHHHHHH
T ss_pred             cccccCcc--cccccccCCCCceEeecchhh
Confidence            67777777  555456667788888887653


No 67 
>d1wyha1 g.39.1.3 (A:35-66) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.74  E-value=34  Score=16.74  Aligned_cols=29  Identities=14%  Similarity=0.407  Sum_probs=20.9

Q ss_pred             ccccccccCCCCCeeecCCCCeeCHhhHHHH
Q 029012          138 CPICLEEYDTENPKLITKCEHHFHLSCILEW  168 (200)
Q Consensus       138 C~ICle~~~~~~~~~~l~C~H~Fh~~CI~~W  168 (200)
                      |.-|...+  +..-.+..=.+.||..|...-
T Consensus         2 C~~C~qPI--GtkSFip~~~~~yCvpCYE~k   30 (32)
T d1wyha1           2 CSGCEQPL--GSRSFVPDKGAHYCVPCYENK   30 (32)
T ss_dssp             CTTTCCBT--TTSCEEEETTEEEEHHHHHHH
T ss_pred             cccccCcc--cccccccCCCcEEEEeccccc
Confidence            67777777  555556667888998887653


No 68 
>d1lv3a_ g.39.1.9 (A:) Hypothetical zinc finger protein YacG {Escherichia coli [TaxId: 562]}
Probab=20.51  E-value=13  Score=21.72  Aligned_cols=10  Identities=30%  Similarity=1.142  Sum_probs=8.3

Q ss_pred             CCcccccccc
Q 029012          174 SCPICDQVCL  183 (200)
Q Consensus       174 tCP~CR~~l~  183 (200)
                      .||+|++.+.
T Consensus         8 ~CP~C~k~~~   17 (65)
T d1lv3a_           8 NCPTCGKTVV   17 (65)
T ss_dssp             ECTTTCCEEE
T ss_pred             eCCCCCCccc
Confidence            5999999764


No 69 
>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.50  E-value=53  Score=18.82  Aligned_cols=29  Identities=17%  Similarity=0.489  Sum_probs=20.5

Q ss_pred             CCCcccccccccCCCCCeeecCCCCeeCHhh
Q 029012          134 EEDTCPICLEEYDTENPKLITKCEHHFHLSC  164 (200)
Q Consensus       134 ~~~~C~ICle~~~~~~~~~~l~C~H~Fh~~C  164 (200)
                      ....|.+|-..+... . ..-.||+.||...
T Consensus        14 k~~RC~~C~KKl~l~-~-~~CrCg~~FC~~H   42 (64)
T d1wfha_          14 RPNRCTVCRKRVGLT-G-FMCRCGTTFCGSH   42 (64)
T ss_dssp             SCCCCTTTCCCCCTT-C-EECSSSCEECTTT
T ss_pred             CCCcChhhCCCccce-e-eeccCCCEehhhc
Confidence            456799998777322 2 5668999999765


Done!