Query 029020
Match_columns 200
No_of_seqs 128 out of 865
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 06:12:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029020.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029020hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 3.4E-36 7.3E-41 236.6 17.2 177 1-194 1-177 (178)
2 PLN02314 pectinesterase 100.0 1.8E-33 3.8E-38 254.9 20.0 160 33-196 68-235 (586)
3 PLN02484 probable pectinestera 100.0 3.9E-33 8.5E-38 252.2 19.1 156 34-196 72-228 (587)
4 smart00856 PMEI Plant invertas 100.0 3.2E-33 7E-38 213.0 15.6 146 34-190 3-148 (148)
5 PLN02217 probable pectinestera 100.0 5.5E-33 1.2E-37 252.8 19.0 159 33-196 51-209 (670)
6 PLN02468 putative pectinestera 100.0 5.9E-33 1.3E-37 250.4 18.9 155 34-196 63-218 (565)
7 PLN02313 Pectinesterase/pectin 100.0 1.1E-32 2.3E-37 249.7 19.7 161 34-196 58-221 (587)
8 PLN02990 Probable pectinestera 100.0 1.1E-32 2.4E-37 248.7 19.2 158 34-196 52-211 (572)
9 PLN02416 probable pectinestera 100.0 7.9E-32 1.7E-36 241.8 18.1 188 1-196 1-193 (541)
10 PLN02713 Probable pectinestera 100.0 1E-31 2.2E-36 242.2 18.1 171 12-193 14-188 (566)
11 PLN02197 pectinesterase 100.0 1.3E-31 2.9E-36 241.6 18.6 155 33-196 36-192 (588)
12 PLN02506 putative pectinestera 100.0 1.7E-31 3.6E-36 239.3 18.1 164 30-196 29-193 (537)
13 PLN02708 Probable pectinestera 100.0 2.6E-31 5.6E-36 239.2 18.5 151 33-194 42-195 (553)
14 PLN02745 Putative pectinestera 100.0 6E-31 1.3E-35 238.2 19.5 156 32-196 76-233 (596)
15 PLN02995 Probable pectinestera 100.0 7.4E-31 1.6E-35 235.4 17.5 156 35-196 34-192 (539)
16 PF04043 PMEI: Plant invertase 100.0 3E-30 6.5E-35 197.1 14.6 150 33-190 2-152 (152)
17 PLN02301 pectinesterase/pectin 100.0 4.9E-30 1.1E-34 230.1 17.4 154 32-196 47-202 (548)
18 PLN02698 Probable pectinestera 100.0 3.1E-29 6.6E-34 223.4 16.5 154 32-196 19-178 (497)
19 PLN03043 Probable pectinestera 100.0 2.1E-29 4.6E-34 226.2 15.5 150 39-193 3-156 (538)
20 PLN02933 Probable pectinestera 99.9 1.5E-23 3.3E-28 187.1 16.3 126 63-196 48-183 (530)
21 PLN02201 probable pectinestera 99.9 2.3E-23 5E-28 186.0 14.8 128 66-195 37-164 (520)
22 PLN02488 probable pectinestera 99.9 1.1E-22 2.4E-27 179.9 14.2 151 39-195 2-160 (509)
23 PLN02170 probable pectinestera 99.9 1.9E-22 4.2E-27 179.7 13.2 160 9-196 18-186 (529)
24 PLN02916 pectinesterase family 99.7 1.3E-16 2.9E-21 141.9 11.7 87 96-196 56-142 (502)
25 KOG1733 Mitochondrial import i 70.2 34 0.00073 23.9 6.7 51 74-124 28-85 (97)
26 PF14290 DUF4370: Domain of un 68.4 61 0.0013 26.1 8.8 59 102-164 130-188 (239)
27 PF07870 DUF1657: Protein of u 63.6 32 0.00069 21.1 5.3 42 78-120 6-47 (50)
28 PF06404 PSK: Phytosulfokine p 61.4 8.6 0.00019 26.2 2.5 22 10-31 2-23 (81)
29 PF05887 Trypan_PARP: Procycli 56.4 3.7 8E-05 30.7 0.0 19 1-19 1-21 (143)
30 PLN02749 Uncharacterized prote 53.1 1E+02 0.0022 23.7 9.2 59 102-164 64-122 (173)
31 PF05984 Cytomega_UL20A: Cytom 48.7 18 0.00038 24.9 2.3 20 1-20 1-20 (100)
32 PF02953 zf-Tim10_DDP: Tim10/D 41.7 41 0.0009 21.4 3.3 29 96-124 36-64 (66)
33 PF10360 DUF2433: Protein of u 40.0 51 0.0011 24.7 3.9 52 140-198 13-67 (132)
34 COG5510 Predicted small secret 38.9 41 0.00088 20.1 2.5 21 1-21 2-22 (44)
35 PF11172 DUF2959: Protein of u 37.1 2.2E+02 0.0048 22.9 7.4 86 40-127 5-91 (201)
36 PF13956 Ibs_toxin: Toxin Ibs, 35.6 17 0.00037 17.5 0.5 8 7-14 4-11 (19)
37 PF08138 Sex_peptide: Sex pept 35.3 12 0.00027 23.3 -0.0 39 8-47 5-48 (56)
38 PF08287 DASH_Spc19: Spc19; I 31.3 1.8E+02 0.0039 22.2 5.8 22 105-126 2-23 (153)
39 PF10792 DUF2605: Protein of u 30.5 1.8E+02 0.0038 20.6 5.1 53 140-194 15-67 (98)
40 PF03487 IL13: Interleukin-13; 30.4 57 0.0012 19.1 2.2 17 146-164 3-19 (43)
41 PF12438 DUF3679: Protein of u 25.0 56 0.0012 20.7 1.7 21 4-24 2-22 (56)
42 PF02609 Exonuc_VII_S: Exonucl 20.5 2.2E+02 0.0047 17.3 4.6 45 112-164 1-45 (53)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=3.4e-36 Score=236.59 Aligned_cols=177 Identities=31% Similarity=0.523 Sum_probs=160.2
Q ss_pred ChhHhHHHHHHHHHHHhhhhcccccccCCCCCchhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHH
Q 029020 1 MARIANLLLALPVLCIMGMAKAGTITELPSHNGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSR 80 (200)
Q Consensus 1 m~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~ 80 (200)
|+|+++++.+++++++|+.+.+ + +...+...|+.+|++|+||++|+.+|.++|++..+|+.+++.++++.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~ 74 (178)
T TIGR01614 1 MASSLSLLLFLLLLSLVATSSS-N-----SLNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSN 74 (178)
T ss_pred CchhHHHHHHHHHHcccccccc-c-----CCcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999988888555 2 234577899999999999999999999999887889999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHh
Q 029020 81 TKSADSFVSNLVKHKDLKPREQQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLD 160 (200)
Q Consensus 81 ~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~D 160 (200)
++.+..++.++..+ ..++..+.++++|.++|++++++|+++++++ +.+ +++|+++|||+|+++++||+|
T Consensus 75 ~~~~~~~i~~l~~~-~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l---~~~-------~~~d~~~~ls~a~~~~~tC~d 143 (178)
T TIGR01614 75 ASDTLDHISKLLLT-KGDPRDKSALEDCVELYSDAVDALDKALASL---KSK-------DYSDAETWLSSALTDPSTCED 143 (178)
T ss_pred HHHHHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhc-------chhHHHHHHHHHHcccchHHH
Confidence 99999999998765 3478899999999999999999999999999 532 689999999999999999999
Q ss_pred hhccCChhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 029020 161 GLAALDGEVKDSIRTRVSNVAEVTSNALALVNQL 194 (200)
Q Consensus 161 gf~~~~~~~~~~v~~~~~~~~~L~snaLaii~~l 194 (200)
||.+.++..+++|...+.++.+|++|+|+|++++
T Consensus 144 ~f~~~~~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 144 GFEELGGIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred HhccCCCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998765678999999999999999999999875
No 2
>PLN02314 pectinesterase
Probab=100.00 E-value=1.8e-33 Score=254.86 Aligned_cols=160 Identities=26% Similarity=0.473 Sum_probs=141.0
Q ss_pred chhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHH
Q 029020 33 GDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLM 112 (200)
Q Consensus 33 ~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~ 112 (200)
.....|+.+|+.|+||++|+++|++.|.+...+|++|++++++++++++..+...++++... ..+++.+.||+||.|+|
T Consensus 68 ~~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-~~~~~~k~AL~DC~Ell 146 (586)
T PLN02314 68 TPATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-TNDERLKSALRVCETLF 146 (586)
T ss_pred CHHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHH
Confidence 35579999999999999999999999988788999999999999999999999999988753 57889999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcc--hhhhhhHHHHHHHHhhhchHHHHhhhccC------ChhhHHHHHHHHHHHHHHH
Q 029020 113 GDSIDRLSKSVQELRGISGANDRD--FLWHISNVQTWVSAALTDDDTCLDGLAAL------DGEVKDSIRTRVSNVAEVT 184 (200)
Q Consensus 113 ~~a~~~L~~a~~al~~~~~~~~~~--~~~~~~d~~twLSaalt~~~TC~Dgf~~~------~~~~~~~v~~~~~~~~~L~ 184 (200)
++++|+|++++.+| ..++... +.+.++|++|||||||||++||+|||++. ++.++..|...+.++.+|+
T Consensus 147 ddAid~L~~Sl~~l---~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLt 223 (586)
T PLN02314 147 DDAIDRLNDSISSM---QVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFT 223 (586)
T ss_pred HHHHHHHHHHHHHH---hhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999 4222111 24578999999999999999999999864 4568888999999999999
Q ss_pred HHHHHHHHhhhh
Q 029020 185 SNALALVNQLAK 196 (200)
Q Consensus 185 snaLaii~~l~~ 196 (200)
||+|||++.+..
T Consensus 224 SNaLAIi~~l~~ 235 (586)
T PLN02314 224 SNSLAIVSKILG 235 (586)
T ss_pred HHHHHHHhhhcc
Confidence 999999998654
No 3
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.9e-33 Score=252.22 Aligned_cols=156 Identities=29% Similarity=0.515 Sum_probs=137.1
Q ss_pred hhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHHH
Q 029020 34 DSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLMG 113 (200)
Q Consensus 34 ~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~ 113 (200)
....|+.+|+.|+||++|+++|.+.|.+...+|++|+++++++++.++..+......+.. ...+++++.||+||+|+|+
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-~~~~~r~k~AL~DClELld 150 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-VQMPPRVRSAYDSCLELLD 150 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Confidence 456999999999999999999999998778899999999999999999988766555543 4578899999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccC-ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 029020 114 DSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAAL-DGEVKDSIRTRVSNVAEVTSNALALVN 192 (200)
Q Consensus 114 ~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~-~~~~~~~v~~~~~~~~~L~snaLaii~ 192 (200)
+++|+|++++.++ .... . ...++|++|||||||||++||+|||++. ++.++++|.+.+.++.+|+||+|||++
T Consensus 151 dAid~L~~Sl~~l---~~~~--~-~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~ 224 (587)
T PLN02484 151 DSVDALSRALSSV---VPSS--G-GGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFS 224 (587)
T ss_pred HHHHHHHHHHHHH---hccc--c-ccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999 4211 1 3467999999999999999999999876 357899999999999999999999999
Q ss_pred hhhh
Q 029020 193 QLAK 196 (200)
Q Consensus 193 ~l~~ 196 (200)
.+..
T Consensus 225 ~~~~ 228 (587)
T PLN02484 225 ASNG 228 (587)
T ss_pred cccc
Confidence 8764
No 4
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=3.2e-33 Score=213.03 Aligned_cols=146 Identities=42% Similarity=0.672 Sum_probs=136.0
Q ss_pred hhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHHH
Q 029020 34 DSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLMG 113 (200)
Q Consensus 34 ~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~ 113 (200)
....|+.+|++|+||++|+++|.++|++...|+.+|++++++.++.++..+..+++++.+ +..++..+.+|+||.++|+
T Consensus 3 ~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~-~~~~~~~~~al~~C~~~y~ 81 (148)
T smart00856 3 TSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLK-KTKDPRLKAALKDCLELYD 81 (148)
T ss_pred HHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999888999999999999999999999999999876 4678899999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 029020 114 DSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALAL 190 (200)
Q Consensus 114 ~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLai 190 (200)
+++++|++++.++ ..+ +++|+++|||+|++|++||+|||.+.++.++++|...+.++.+|++|+|+|
T Consensus 82 ~a~~~L~~a~~~l---~~~-------~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 82 DAVDSLEKALEEL---KSG-------DYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHH---Hhc-------chhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999 532 689999999999999999999999866678899999999999999999986
No 5
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.5e-33 Score=252.76 Aligned_cols=159 Identities=25% Similarity=0.476 Sum_probs=138.1
Q ss_pred chhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHH
Q 029020 33 GDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLM 112 (200)
Q Consensus 33 ~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~ 112 (200)
+..+.|+.+|+.|+||++|+++|.+.+ ....+|++|++++++++++++..+...++++.. ...+++++.|++||+|+|
T Consensus 51 ~~~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~-~~~~~r~k~AL~DClELl 128 (670)
T PLN02217 51 TSVKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIE-LQKDPRTKMALDQCKELM 128 (670)
T ss_pred hHHHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCChHHHHHHHHHHHHH
Confidence 445699999999999999999999988 456799999999999999999999988888743 245788999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 029020 113 GDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALVN 192 (200)
Q Consensus 113 ~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLaii~ 192 (200)
++++|+|.+++.++ ...+...+....+|++||||||||||+||+|||++.++.++..|...+.++.+|+||+|||++
T Consensus 129 ddAvDeL~~Sl~~L---~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~ 205 (670)
T PLN02217 129 DYAIGELSKSFEEL---GKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVS 205 (670)
T ss_pred HHHHHHHHHHHHHH---hhccccccccchhHHHHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 422122233467999999999999999999999876677889999999999999999999999
Q ss_pred hhhh
Q 029020 193 QLAK 196 (200)
Q Consensus 193 ~l~~ 196 (200)
.+..
T Consensus 206 ~lss 209 (670)
T PLN02217 206 EMSN 209 (670)
T ss_pred hccc
Confidence 8654
No 6
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.9e-33 Score=250.37 Aligned_cols=155 Identities=27% Similarity=0.416 Sum_probs=136.5
Q ss_pred hhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCCcccccHHHHHHHHH
Q 029020 34 DSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHK-DLKPREQQPIDDCLQLM 112 (200)
Q Consensus 34 ~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~-~~~~~~~~al~dC~el~ 112 (200)
....|+.+|+.|+||++|+++|.++|.+...+|++|++++++++++++..+...+.++.... ..+++.+.||+||.|+|
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELl 142 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELL 142 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHH
Confidence 44699999999999999999999999877889999999999999999999988887775432 45789999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 029020 113 GDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALVN 192 (200)
Q Consensus 113 ~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLaii~ 192 (200)
++++|+|++++.++ ... ...+.++|++||||||||||+||+|||++ +.++++|...+.++.+|+||+|||++
T Consensus 143 ddaid~L~~Sl~~l---~~~---~~~~~~dDl~TWLSAAlTnq~TClDGF~e--~~vk~~~~~~l~n~~eLtSNaLAIi~ 214 (565)
T PLN02468 143 DLAIDNLNNSLTSS---GGV---SVLDNVDDLRTWLSSAGTYQETCIDGLAE--PNLKSFGENHLKNSTELTSNSLAIIT 214 (565)
T ss_pred HHHHHHHHHHHHHH---hcc---ccccchHHHHHHHHHHhcchhhhhhhhcc--cCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999 421 11346799999999999999999999986 34788999999999999999999999
Q ss_pred hhhh
Q 029020 193 QLAK 196 (200)
Q Consensus 193 ~l~~ 196 (200)
.+..
T Consensus 215 ~l~~ 218 (565)
T PLN02468 215 WIGK 218 (565)
T ss_pred cccc
Confidence 8554
No 7
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-32 Score=249.66 Aligned_cols=161 Identities=25% Similarity=0.457 Sum_probs=139.5
Q ss_pred hhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCCcccccHHHHHHHHH
Q 029020 34 DSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHK-DLKPREQQPIDDCLQLM 112 (200)
Q Consensus 34 ~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~-~~~~~~~~al~dC~el~ 112 (200)
....|+.+|+.|+||++|+++|++.|.+...+|.+|++++++++++++..+...++++.... ..+++++.||+||+|+|
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl 137 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI 137 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 45699999999999999999999988776779999999999999999999999999887533 46788999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccC--ChhhHHHHHHHHHHHHHHHHHHHHH
Q 029020 113 GDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAAL--DGEVKDSIRTRVSNVAEVTSNALAL 190 (200)
Q Consensus 113 ~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~--~~~~~~~v~~~~~~~~~L~snaLai 190 (200)
++++|+|.+++.++..... ...+..+++|++||||||||||+||+|||++. ++.+++.|...+.++.+|+||+|||
T Consensus 138 ddavD~L~~Sl~~l~~~~~--~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAI 215 (587)
T PLN02313 138 DETLDELHVAVEDLHQYPK--QKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAM 215 (587)
T ss_pred HHHHHHHHHHHHHHhhccc--ccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999932111 12334568999999999999999999999853 4568899999999999999999999
Q ss_pred HHhhhh
Q 029020 191 VNQLAK 196 (200)
Q Consensus 191 i~~l~~ 196 (200)
++.+..
T Consensus 216 v~~~~~ 221 (587)
T PLN02313 216 IKNMTE 221 (587)
T ss_pred Hhcccc
Confidence 998664
No 8
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-32 Score=248.71 Aligned_cols=158 Identities=21% Similarity=0.426 Sum_probs=137.1
Q ss_pred hhHHHHccCCCCCChhhHHHhhcc-cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCCcccccHHHHHHHH
Q 029020 34 DSIFIETSCKSTRYRTVCVQSLLP-YAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKH-KDLKPREQQPIDDCLQL 111 (200)
Q Consensus 34 ~~~~v~~~C~~T~~p~~C~~tL~~-~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~-~~~~~~~~~al~dC~el 111 (200)
....|+.+|+.|+||++|+++|.+ .|. ..+|++|++++++++++++..+...+.+++.. ...+++++.|++||+|+
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence 446999999999999999999998 443 56899999999999999999998888777543 25688999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 029020 112 MGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALV 191 (200)
Q Consensus 112 ~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLaii 191 (200)
|++++|+|++++.++ ...+...+...++|++|||||||||++||+|||++.++++++.|...+.++.+|+||+|||+
T Consensus 130 lddAvdeL~~Sl~~l---~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv 206 (572)
T PLN02990 130 MNDATDDLKKCLDNF---DGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMI 206 (572)
T ss_pred HHHHHHHHHHHHHHH---hhcccccccchhHHHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 42222233456899999999999999999999987666788999999999999999999999
Q ss_pred Hhhhh
Q 029020 192 NQLAK 196 (200)
Q Consensus 192 ~~l~~ 196 (200)
+.+..
T Consensus 207 ~~~~~ 211 (572)
T PLN02990 207 TNISN 211 (572)
T ss_pred hhhhc
Confidence 98665
No 9
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=7.9e-32 Score=241.79 Aligned_cols=188 Identities=23% Similarity=0.369 Sum_probs=149.1
Q ss_pred Ch-hHhHHHHHHHHH--HHhhhh-cccccccCCCCCchhHHHHccCCCCCChhhHHHhhccccccc-CCCHHHHHHHHHH
Q 029020 1 MA-RIANLLLALPVL--CIMGMA-KAGTITELPSHNGDSIFIETSCKSTRYRTVCVQSLLPYAYKI-QRSPLQMALEALS 75 (200)
Q Consensus 1 m~-~~~~~~~~ll~~--~~~~~~-~~~~~~~~~~~~~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~-~~d~~~l~~~ai~ 75 (200)
|| .++.|+.+||++ +|++.+ -++... -++..+..+.|+.+|+.|+||++|+++|.+++... ..++.+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~ 79 (541)
T PLN02416 1 MAFSSLNLLLFLLFFSPFFFSSAWYSNASY-TTSLDPHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQ 79 (541)
T ss_pred CchhHHHHHHHHHHcchhhccchhhccccc-ccCCchHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHH
Confidence 45 355666666666 444443 222221 12445667899999999999999999999987532 4567789999999
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhch
Q 029020 76 VSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDD 155 (200)
Q Consensus 76 ~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~ 155 (200)
.++..+..+...++.+......+++++.|++||.|+|++++|+|++++.+| ..++ .+.++|++|||||||||+
T Consensus 80 ~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~DC~El~~dAvD~L~~Sl~~L---~~~~----~~~~~DvqTWLSAALT~q 152 (541)
T PLN02416 80 TAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKELHQITVSSLKRSVSRI---QAGD----SRKLADARAYLSAALTNK 152 (541)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhcc----ccchhhHHHHHHHHhcch
Confidence 999999888877766543333467889999999999999999999999999 4321 137899999999999999
Q ss_pred HHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029020 156 DTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALVNQLAK 196 (200)
Q Consensus 156 ~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLaii~~l~~ 196 (200)
+||+|||++.++.++++|...+.++.+|+||+|||++.+..
T Consensus 153 ~TC~DGF~~~~~~~~~~i~~~~~~v~qltSNALAlv~~~~~ 193 (541)
T PLN02416 153 NTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSMLPKSRR 193 (541)
T ss_pred hhHHhhhhhcCcchhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999876678899999999999999999999997654
No 10
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1e-31 Score=242.19 Aligned_cols=171 Identities=25% Similarity=0.302 Sum_probs=139.6
Q ss_pred HHHHHhhhhcccccccCCCCCchhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 029020 12 PVLCIMGMAKAGTITELPSHNGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNL 91 (200)
Q Consensus 12 l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l 91 (200)
|++.+++.-.++-+.|+++ ..+..+|+.|+||++|+++|++. ...+|.++++++|++++.++..+...++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~-----~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L 85 (566)
T PLN02713 14 LLLLFFSSSSASDPPPSTP-----VSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRY 85 (566)
T ss_pred HHHHhcchhhhcCCCcCCC-----CCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444435555543433 34578999999999999999863 256899999999999999999999999988
Q ss_pred hhcCC--CCcccccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccC--Ch
Q 029020 92 VKHKD--LKPREQQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAAL--DG 167 (200)
Q Consensus 92 ~~~~~--~~~~~~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~--~~ 167 (200)
..... .+++++.||+||.|+|++++|+|.+++.++ ...+...+.+.++|++||||||||||+||+|||++. ++
T Consensus 86 ~~~~~~~~~~r~k~AL~DC~ELlddavD~L~~Sl~~l---~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~ 162 (566)
T PLN02713 86 LKRNSTLLSKSAIRALEDCQFLAGLNIDFLLSSFETV---NSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAW 162 (566)
T ss_pred HhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhccccccccchhhHHHHHHHhhcchhhhhhhhhccccch
Confidence 76432 378899999999999999999999999999 422222245678999999999999999999999875 34
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh
Q 029020 168 EVKDSIRTRVSNVAEVTSNALALVNQ 193 (200)
Q Consensus 168 ~~~~~v~~~~~~~~~L~snaLaii~~ 193 (200)
.+++.|...+.++.+|+||+|||++.
T Consensus 163 ~~k~~v~~~l~nvt~LtSNaLAlv~~ 188 (566)
T PLN02713 163 SVRNGLAVPLSNDTKLYSVSLALFTK 188 (566)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 67788999999999999999999986
No 11
>PLN02197 pectinesterase
Probab=99.98 E-value=1.3e-31 Score=241.63 Aligned_cols=155 Identities=17% Similarity=0.359 Sum_probs=133.1
Q ss_pred chhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcCCCCcccccHHHHHHH
Q 029020 33 GDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLV--KHKDLKPREQQPIDDCLQ 110 (200)
Q Consensus 33 ~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~--~~~~~~~~~~~al~dC~e 110 (200)
+..+.|+.+|+.|+||++|+++|++.+ ..+|.+|++++++++++++.++...+..+. ..+..+++++.|++||.|
T Consensus 36 ~~~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~e 112 (588)
T PLN02197 36 PQMKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKR 112 (588)
T ss_pred hhHHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Confidence 445589999999999999999999988 358999999999999999999998888664 223457899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 029020 111 LMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALAL 190 (200)
Q Consensus 111 l~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLai 190 (200)
+|++++|+|.+++.++ +. +...+...++|++||||||||||+||+|||++. .++..|...+.++.+|+||+|||
T Consensus 113 Ll~davd~L~~Sl~~l---~~-~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~--~~k~~v~~~l~nv~~LtSNaLAi 186 (588)
T PLN02197 113 VFMYALEDLSTIVEEM---GE-DLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED--DLRKTIGEGIANSKILTSNAIDI 186 (588)
T ss_pred HHHHHHHHHHHHHHHH---hh-cccccccchhhHHHHHHHHHhChhhhhccccCc--chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 41 011223467999999999999999999999863 46788999999999999999999
Q ss_pred HHhhhh
Q 029020 191 VNQLAK 196 (200)
Q Consensus 191 i~~l~~ 196 (200)
++.+..
T Consensus 187 v~~ls~ 192 (588)
T PLN02197 187 FHSVVS 192 (588)
T ss_pred hhccch
Confidence 998654
No 12
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1.7e-31 Score=239.31 Aligned_cols=164 Identities=27% Similarity=0.437 Sum_probs=139.2
Q ss_pred CCCchhHHHHccCCCCCChhhHHHhhcccccc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHH
Q 029020 30 SHNGDSIFIETSCKSTRYRTVCVQSLLPYAYK-IQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDC 108 (200)
Q Consensus 30 ~~~~~~~~v~~~C~~T~~p~~C~~tL~~~~~s-~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC 108 (200)
........|+..|+.|+||++|+++|++.... ...+|.+|++++++++++++.++...+.++... ..+++++.|++||
T Consensus 29 ~~~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~-~~~~r~~~Al~DC 107 (537)
T PLN02506 29 QELNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNAL-SISYREQVAIEDC 107 (537)
T ss_pred hhhhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHHHHHHHH
Confidence 33566779999999999999999999986433 457899999999999999999999999888543 4678899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHH
Q 029020 109 LQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNAL 188 (200)
Q Consensus 109 ~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaL 188 (200)
+|+|++++++|.+++.+++....+ .......+|++|||||||||++||+|||++.++.+++.|...+.++.+|+||+|
T Consensus 108 ~EllddSvd~L~~Sl~el~~~~~~--~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNAL 185 (537)
T PLN02506 108 KELLDFSVSELAWSLLEMNKIRAG--HDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVL 185 (537)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccc--cccccchhhHHhHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998432111 111124689999999999999999999998766788999999999999999999
Q ss_pred HHHHhhhh
Q 029020 189 ALVNQLAK 196 (200)
Q Consensus 189 aii~~l~~ 196 (200)
||++++..
T Consensus 186 Aiv~~l~~ 193 (537)
T PLN02506 186 AMYTQLHS 193 (537)
T ss_pred HHHhhccc
Confidence 99997654
No 13
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=2.6e-31 Score=239.20 Aligned_cols=151 Identities=26% Similarity=0.422 Sum_probs=129.8
Q ss_pred chhHHHHccCCCCCChhhHHHhhccccc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHH
Q 029020 33 GDSIFIETSCKSTRYRTVCVQSLLPYAY-KIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQL 111 (200)
Q Consensus 33 ~~~~~v~~~C~~T~~p~~C~~tL~~~~~-s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el 111 (200)
.....|+..|+.|+||++|+++|++++. +...+|.++++++|+++++++..+...++.+......+.....|++||+|+
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~EL 121 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLEV 121 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence 5678999999999999999999999885 345689999999999999999999999998875432233345899999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCC--hhhHHHHHHHHHHHHHHHHHHHH
Q 029020 112 MGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALD--GEVKDSIRTRVSNVAEVTSNALA 189 (200)
Q Consensus 112 ~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~--~~~~~~v~~~~~~~~~L~snaLa 189 (200)
|++++|+|.+++.++ .. ..++|++||||||||||+||+|||++.+ +.++..| ..+.++.+|+||+||
T Consensus 122 lddavd~L~~Sl~~L---~~-------~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLA 190 (553)
T PLN02708 122 LSNSEHRISSTDIAL---PR-------GKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALS 190 (553)
T ss_pred HHHHHHHHHHHHHHh---hh-------cchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999988 42 2689999999999999999999998753 4566666 688999999999999
Q ss_pred HHHhh
Q 029020 190 LVNQL 194 (200)
Q Consensus 190 ii~~l 194 (200)
|++.+
T Consensus 191 mv~~~ 195 (553)
T PLN02708 191 MMASY 195 (553)
T ss_pred hhhcc
Confidence 99974
No 14
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6e-31 Score=238.16 Aligned_cols=156 Identities=23% Similarity=0.420 Sum_probs=136.2
Q ss_pred CchhHHHHccCCCCCChhhHHHhhccccc--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHH
Q 029020 32 NGDSIFIETSCKSTRYRTVCVQSLLPYAY--KIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCL 109 (200)
Q Consensus 32 ~~~~~~v~~~C~~T~~p~~C~~tL~~~~~--s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~ 109 (200)
....+.|+.+|+.|+||++|+++|.++.. +...+|.+|++++|+++++++..+...+.++. ..+++.+.|++||.
T Consensus 76 ~~~~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~---~~~~r~k~Al~DC~ 152 (596)
T PLN02745 76 SQVDKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK---FENPDEKDAIEDCK 152 (596)
T ss_pred chHHHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCHHHHHHHHHHH
Confidence 45568999999999999999999998653 34678999999999999999999988887763 46789999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHH
Q 029020 110 QLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALA 189 (200)
Q Consensus 110 el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLa 189 (200)
|+|++++|+|++++.++ .. +...+.+.++|++|||||||||++||+|||++ +.++++|...+.++.+|+||+||
T Consensus 153 ELlddAid~L~~Sl~~l---~~-~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e--~~l~s~m~~~l~~~~eLtSNALA 226 (596)
T PLN02745 153 LLVEDAKEELKASISRI---ND-EVNKLAKNVPDLNNWLSAVMSYQETCIDGFPE--GKLKSEMEKTFKSSQELTSNSLA 226 (596)
T ss_pred HHHHHHHHHHHHHHHHH---hh-cccccccchHHHHHHHHHHhccHhHHHhhhcc--cchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 42 12234567899999999999999999999987 45789999999999999999999
Q ss_pred HHHhhhh
Q 029020 190 LVNQLAK 196 (200)
Q Consensus 190 ii~~l~~ 196 (200)
|++.+..
T Consensus 227 iv~~lss 233 (596)
T PLN02745 227 MVSSLTS 233 (596)
T ss_pred HHhhhhh
Confidence 9998654
No 15
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=7.4e-31 Score=235.43 Aligned_cols=156 Identities=26% Similarity=0.341 Sum_probs=128.0
Q ss_pred hHHHHccCCCCCChhhHHHhhccccccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHHH
Q 029020 35 SIFIETSCKSTRYRTVCVQSLLPYAYKI-QRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLMG 113 (200)
Q Consensus 35 ~~~v~~~C~~T~~p~~C~~tL~~~~~s~-~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~ 113 (200)
...|+.+|..|+||++|+++|.+.|.+. ..++.++++++++.++.++.++...+.++.. ...+++.+.|++||.|+|+
T Consensus 34 ~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~-~~~~~r~~~AL~DC~ELl~ 112 (539)
T PLN02995 34 STDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGK-NCTDFKKQAVLADCIDLYG 112 (539)
T ss_pred hHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCHHHHHHHHHHHHHHH
Confidence 3599999999999999999999988753 3488999999999999999999999988854 2467889999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHH--HHHHHHHHHHHHHH
Q 029020 114 DSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRV--SNVAEVTSNALALV 191 (200)
Q Consensus 114 ~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~--~~~~~L~snaLaii 191 (200)
+++|+|+++++++ +......+...++|++|||||||||++||+|||++.+ ++..+...+ .++.+|+||+|||+
T Consensus 113 DAvD~L~~Sl~~l---~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~--~~~~v~~~v~~~~~~~ltSNaLAi~ 187 (539)
T PLN02995 113 DTIMQLNRTLQGV---SPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLN--VSDFITPIVSNTKISHLISNCLAVN 187 (539)
T ss_pred HHHHHHHHHHHHH---hhccccccccchhhHHHHHHHHhcchhhhhhhhcccc--chhhhhhhhhhhhHHHHHHHHHHHh
Confidence 9999999999999 4211111223568999999999999999999998742 223333333 67999999999999
Q ss_pred Hhhhh
Q 029020 192 NQLAK 196 (200)
Q Consensus 192 ~~l~~ 196 (200)
+.+..
T Consensus 188 ~~l~~ 192 (539)
T PLN02995 188 GALLT 192 (539)
T ss_pred hhhcc
Confidence 98754
No 16
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.97 E-value=3e-30 Score=197.05 Aligned_cols=150 Identities=34% Similarity=0.569 Sum_probs=128.1
Q ss_pred chhHHHHccCCCCCChh-hHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHH
Q 029020 33 GDSIFIETSCKSTRYRT-VCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQL 111 (200)
Q Consensus 33 ~~~~~v~~~C~~T~~p~-~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el 111 (200)
+....|+++|++|+||. +|+.+|.+++.....|+.+|+++++++++.++..+..++.++.+..+.++..+.+|++|.++
T Consensus 2 s~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~ 81 (152)
T PF04043_consen 2 STSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQEL 81 (152)
T ss_dssp --HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHH
T ss_pred chHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHH
Confidence 35688999999999777 99999999988888999999999999999999999999999987556789999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 029020 112 MGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALAL 190 (200)
Q Consensus 112 ~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLai 190 (200)
|++++++|+++++++ . . ...+|+++++|||+|+++++||+|||++..+..+++|...+.++.+|++|+|+|
T Consensus 82 y~~a~~~l~~a~~~l---~-~----~~~~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 82 YDDAVDSLQRALEAL---N-S----KNGDYDDARTWLSAALTNQDTCEDGFEEAGSPVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHHHHHHHHHHH----------HHT-HHHHHHHHHHHHHHHHHHHHHC-TTSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh---h-c----ccchhHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhC
Confidence 999999999999999 1 1 123799999999999999999999996434567899999999999999999997
No 17
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=4.9e-30 Score=230.08 Aligned_cols=154 Identities=21% Similarity=0.386 Sum_probs=134.6
Q ss_pred CchhHHHHccCCCCCChhhHHHhhcccccc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHH
Q 029020 32 NGDSIFIETSCKSTRYRTVCVQSLLPYAYK--IQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCL 109 (200)
Q Consensus 32 ~~~~~~v~~~C~~T~~p~~C~~tL~~~~~s--~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~ 109 (200)
....+.|+..|+.|+||++|+++|.+.+.+ ...+|.+|++++|+++++++..+...++++.. +..+++.+.|++||.
T Consensus 47 ~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-~~~~~~~~aAL~DC~ 125 (548)
T PLN02301 47 SSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-RINDPRDKAALADCV 125 (548)
T ss_pred CCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCChHHHHHHHHHH
Confidence 456689999999999999999999998754 34589999999999999999999999998844 457889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHH
Q 029020 110 QLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALA 189 (200)
Q Consensus 110 el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLa 189 (200)
|+|++++|+|+++++++ +... ...++|++|||||||||++||+|||++. .+++|...++++.+|+||+||
T Consensus 126 ELl~davd~L~~Sl~~l---~~~~----~~~~~Dv~TWLSAALT~q~TC~DGF~~~---~~~~~~~~l~n~~qL~SNsLA 195 (548)
T PLN02301 126 ELMDLSKDRIKDSVEAL---GNVT----SKSHADAHTWLSSVLTNHVTCLDGINGP---SRQSMKPGLKDLISRARTSLA 195 (548)
T ss_pred HHHHHHHHHHHHHHHHh---hccc----ccchHHHHHHHHHHhcchhhHHhhhhhh---hhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 4211 1257899999999999999999999864 257899999999999999999
Q ss_pred HHHhhhh
Q 029020 190 LVNQLAK 196 (200)
Q Consensus 190 ii~~l~~ 196 (200)
|++.+.+
T Consensus 196 iv~~l~~ 202 (548)
T PLN02301 196 ILVSVSP 202 (548)
T ss_pred hhccccc
Confidence 9998654
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=3.1e-29 Score=223.38 Aligned_cols=154 Identities=25% Similarity=0.363 Sum_probs=134.5
Q ss_pred CchhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC--CcccccHHHHHH
Q 029020 32 NGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDL--KPREQQPIDDCL 109 (200)
Q Consensus 32 ~~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~--~~~~~~al~dC~ 109 (200)
.+....|+..|+.|+||++|+++|++.+. +|.+|++++|++++.++..+...+.++...... +++.+.+++||.
T Consensus 19 ~~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~DC~ 94 (497)
T PLN02698 19 FAYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDSCE 94 (497)
T ss_pred hhHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHHHH
Confidence 56788999999999999999999999774 899999999999999999999999887654333 367789999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhcc-C---ChhhHHHHHHHHHHHHHHHH
Q 029020 110 QLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAA-L---DGEVKDSIRTRVSNVAEVTS 185 (200)
Q Consensus 110 el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~-~---~~~~~~~v~~~~~~~~~L~s 185 (200)
|+|++++++|.+++.++ .... ...++|++|||||||||++||+|||.+ . ++.++++|...+.++.+|+|
T Consensus 95 Ell~dsvd~L~~Sl~~l---~~~~----~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltS 167 (497)
T PLN02698 95 RLMKMSLKRLRQSLLAL---KGSS----RKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVS 167 (497)
T ss_pred HHHHHHHHHHHHHHHHH---hhcc----ccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 4211 136899999999999999999999954 2 24688999999999999999
Q ss_pred HHHHHHHhhhh
Q 029020 186 NALALVNQLAK 196 (200)
Q Consensus 186 naLaii~~l~~ 196 (200)
|+|||++.+..
T Consensus 168 NALAmv~~l~~ 178 (497)
T PLN02698 168 NSLALVNRITP 178 (497)
T ss_pred HHHHHHhhhhc
Confidence 99999998765
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.96 E-value=2.1e-29 Score=226.21 Aligned_cols=150 Identities=21% Similarity=0.327 Sum_probs=130.2
Q ss_pred HccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc----CCCCcccccHHHHHHHHHHH
Q 029020 39 ETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKH----KDLKPREQQPIDDCLQLMGD 114 (200)
Q Consensus 39 ~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~----~~~~~~~~~al~dC~el~~~ 114 (200)
...|+.|+||++|+++|++.+.+. .+|.++++.+|++++.++..+...++++... ++.+++++.|++||+|+|++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~-~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELldd 81 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSP-SDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSEL 81 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHH
Confidence 468999999999999999877553 5899999999999999999999999888632 24577889999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 029020 115 SIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALVNQ 193 (200)
Q Consensus 115 a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLaii~~ 193 (200)
++|+|.+++.++ ...+. ......+|++||||||||||+||+|||++.++.++..|...+.++.+|+||+|||++.
T Consensus 82 SvD~L~~Sl~~L---~~~~~-~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 82 NVDYLETISSEL---KSAEL-MTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHH---hcccc-ccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 42211 1234578999999999999999999999876678889999999999999999999996
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=1.5e-23 Score=187.15 Aligned_cols=126 Identities=25% Similarity=0.489 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhh
Q 029020 63 QRSPLQMALEALSVSLSRTKSADSFVSNLVKHK--DLKPREQQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWH 140 (200)
Q Consensus 63 ~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~--~~~~~~~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~ 140 (200)
..+|.+|++++|+++++++..+...++++.... ..+++++.|++||.|+|++++|+|++++.++ ... ...
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l---~~~-----~~~ 119 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKL---RSS-----SPE 119 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhc-----ccc
Confidence 468999999999999999999999999886532 4578999999999999999999999999999 421 125
Q ss_pred hhHHHHHHHHhhhchHHHHhhhccCC--------hhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029020 141 ISNVQTWVSAALTDDDTCLDGLAALD--------GEVKDSIRTRVSNVAEVTSNALALVNQLAK 196 (200)
Q Consensus 141 ~~d~~twLSaalt~~~TC~Dgf~~~~--------~~~~~~v~~~~~~~~~L~snaLaii~~l~~ 196 (200)
++|++|||||||||++||+|||++.+ +.+++.|...+.++.+|+||+|||++.+..
T Consensus 120 ~~Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~ 183 (530)
T PLN02933 120 FNDVSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISG 183 (530)
T ss_pred hhHHHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 79999999999999999999998643 257889999999999999999999998664
No 21
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=2.3e-23 Score=186.02 Aligned_cols=128 Identities=27% Similarity=0.391 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHH
Q 029020 66 PLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQ 145 (200)
Q Consensus 66 ~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~ 145 (200)
+..+++++++++++++..+...++++... ..+++++.|++||.|++++++|+|++++.+|....+. ........+|++
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~~-~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~-~~~~~~~~~Dvq 114 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDKV-FGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGK-DNSTGDVGSDLR 114 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccchhHHH
Confidence 56788999999999999999999888653 4578899999999999999999999999999432110 001134579999
Q ss_pred HHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 029020 146 TWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALVNQLA 195 (200)
Q Consensus 146 twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLaii~~l~ 195 (200)
|||||||||++||+|||++.++.+++.|...+.++.+|+||+|||++...
T Consensus 115 TWLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLALv~~~~ 164 (520)
T PLN02201 115 TWLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLTMVHPPP 164 (520)
T ss_pred HHHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999987667788888999999999999999998744
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.1e-22 Score=179.92 Aligned_cols=151 Identities=23% Similarity=0.291 Sum_probs=126.8
Q ss_pred HccCCCCCChhhHHHhhcccc----cccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcccccHHHHH----HH
Q 029020 39 ETSCKSTRYRTVCVQSLLPYA----YKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDC----LQ 110 (200)
Q Consensus 39 ~~~C~~T~~p~~C~~tL~~~~----~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC----~e 110 (200)
-..|..+++|+.|...+.... .....++.+++.++++.++.++..+...+..+...-..+++++.|++|| +|
T Consensus 2 ~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~e 81 (509)
T PLN02488 2 IGVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEE 81 (509)
T ss_pred ceecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHH
Confidence 358999999999999988766 3334568999999999999999999999988876422288999999999 99
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 029020 111 LMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALAL 190 (200)
Q Consensus 111 l~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLai 190 (200)
+|++++|+|.+++..+ .+.+... ....+|++||||||+|||+||+|||.+ +.++..|...+.++.+|+||+|||
T Consensus 82 l~~~~~~~l~~s~~~~---~~~~~~~-~~~~~d~~twLSa~lt~q~TC~dg~~~--~~~~~~~~~~l~~~~~~~sn~La~ 155 (509)
T PLN02488 82 MMESAKDRMIRSVEEL---LGGESPN-LGSYENVHTWLSGVLTSYITCIDEIGE--GAYKRRVEPELEDLISRARVALAI 155 (509)
T ss_pred HHHHHHHHHHHHHHHh---hcccccc-cCcHHHHHHHHHHhHhchhhHhccccC--cchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999 4211111 124689999999999999999999953 467888999999999999999999
Q ss_pred HHhhh
Q 029020 191 VNQLA 195 (200)
Q Consensus 191 i~~l~ 195 (200)
+..+.
T Consensus 156 ~~~~~ 160 (509)
T PLN02488 156 FISIS 160 (509)
T ss_pred hcccc
Confidence 98765
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.88 E-value=1.9e-22 Score=179.67 Aligned_cols=160 Identities=21% Similarity=0.259 Sum_probs=112.9
Q ss_pred HHHHHHHHhhhhcccccccCCCC-------CchhHHHHccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHH
Q 029020 9 LALPVLCIMGMAKAGTITELPSH-------NGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRT 81 (200)
Q Consensus 9 ~~ll~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~ 81 (200)
++||++=|+.++.++.++++.++ ....+.+++. +||+.|...|++...+ -|..++.-++++.+...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~ 90 (529)
T PLN02170 18 MFLLILNFLYLSAVVFASNSNSHFSKFSRHPNSDSSSRSS----PSSSSKQGFLSSVQES---MNHALFARSLAFNLTLS 90 (529)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCchhccCCCccccccCC----CCcchhhhhhhhhhcc---ChHHHHHhhhHhhhhhh
Confidence 33444444444444544443322 2223444444 9999999999976543 36668888877765522
Q ss_pred HHHHHHHHhhhhcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhh
Q 029020 82 KSADSFVSNLVKHKDLKPREQQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDG 161 (200)
Q Consensus 82 ~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dg 161 (200)
.... ......|++||+|+|++++|+|.++++.. .. .+..+|++|||||||||++||+||
T Consensus 91 ~~~~------------~~~~~~Al~DC~ELlddavd~L~~S~~~~---~~------~~~~~DvqTWLSAALTnq~TClDG 149 (529)
T PLN02170 91 HRTV------------QTHTFDPVNDCLELLDDTLDMLSRIVVIK---HA------DHDEEDVHTWLSAALTNQETCEQS 149 (529)
T ss_pred hhhc------------ccchhHHHHHHHHHHHHHHHHHHHHHHhh---cc------ccchhHHHHHHHHHHhchhhHhhh
Confidence 1111 11236799999999999999999998554 21 246899999999999999999999
Q ss_pred hccCC--hhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029020 162 LAALD--GEVKDSIRTRVSNVAEVTSNALALVNQLAK 196 (200)
Q Consensus 162 f~~~~--~~~~~~v~~~~~~~~~L~snaLaii~~l~~ 196 (200)
|++.+ ..++..|...+.++.+|+||+|||++.+..
T Consensus 150 f~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~ 186 (529)
T PLN02170 150 LQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKS 186 (529)
T ss_pred hhccCccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 98754 355667888889999999999999998654
No 24
>PLN02916 pectinesterase family protein
Probab=99.70 E-value=1.3e-16 Score=141.90 Aligned_cols=87 Identities=30% Similarity=0.446 Sum_probs=71.6
Q ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHH
Q 029020 96 DLKPREQQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRT 175 (200)
Q Consensus 96 ~~~~~~~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~ 175 (200)
+.+-....|++||+|+|++++|+|.+++..+ .. ...+|++||||||||||+||+|||++.+ ... ..
T Consensus 56 ~~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~---~~-------~~~~DvqTWLSAALTnq~TClDGf~~~~-~~~---~~ 121 (502)
T PLN02916 56 GSYYNLGEALSDCEKLYDESEARLSKLLVSH---EN-------FTVEDARTWLSGVLANHHTCLDGLEQKG-QGH---KP 121 (502)
T ss_pred CCcccHhHHHHHHHHHHHHHHHHHHHHHHhh---cc-------CchHHHHHHHHHHHhCHhHHHHhhhhcc-ccc---hH
Confidence 3455677899999999999999999999877 42 1469999999999999999999998643 122 23
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 029020 176 RVSNVAEVTSNALALVNQLAK 196 (200)
Q Consensus 176 ~~~~~~~L~snaLaii~~l~~ 196 (200)
.+.++.+|+||+|||++.+..
T Consensus 122 ~v~nvt~ltSNaLAlv~~~~~ 142 (502)
T PLN02916 122 MAHNVTFVLSEALALYKKSRG 142 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhhh
Confidence 467999999999999998764
No 25
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=70.18 E-value=34 Score=23.89 Aligned_cols=51 Identities=16% Similarity=0.260 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHh-----hhhcC--CCCcccccHHHHHHHHHHHHHHHHHHHHH
Q 029020 74 LSVSLSRTKSADSFVSN-----LVKHK--DLKPREQQPIDDCLQLMGDSIDRLSKSVQ 124 (200)
Q Consensus 74 i~~a~~~~~~a~~~~~~-----l~~~~--~~~~~~~~al~dC~el~~~a~~~L~~a~~ 124 (200)
...+..++......+.. -+..+ ..++.++.++..|++-|-+|-.-+.++..
T Consensus 28 qqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawniVSrty~ 85 (97)
T KOG1733|consen 28 QQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWNIVSRTYI 85 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555544332 12222 35788999999999999999887766643
No 26
>PF14290 DUF4370: Domain of unknown function (DUF4370)
Probab=68.44 E-value=61 Score=26.12 Aligned_cols=59 Identities=14% Similarity=0.143 Sum_probs=41.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhcc
Q 029020 102 QQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAA 164 (200)
Q Consensus 102 ~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~ 164 (200)
..|-+.|.|++.. +..|.-++..+ -+..+.+.+.-.+..+.-|-++..-..+-+|.|..
T Consensus 130 fRAAeAvEeFgG~-L~tLrm~idDl---~GlsGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp 188 (239)
T PF14290_consen 130 FRAAEAVEEFGGI-LVTLRMEIDDL---CGLSGENVKPLPDYIENALRTAYKRYMTYLDSFGP 188 (239)
T ss_pred HHHHHHHHHhhhh-HHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3455678777666 88888888887 54434444444556666677888888999999975
No 27
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=63.56 E-value=32 Score=21.09 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhhhcCCCCcccccHHHHHHHHHHHHHHHHH
Q 029020 78 LSRTKSADSFVSNLVKHKDLKPREQQPIDDCLQLMGDSIDRLS 120 (200)
Q Consensus 78 ~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~el~~~a~~~L~ 120 (200)
+..+.++......+.- ...|+..+..+..|.+.++..+.+|+
T Consensus 6 lAslK~~qA~Le~fal-~T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 6 LASLKKAQADLETFAL-QTQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHhhHHHHHh-hcCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 3344444444444433 24578888999999998888888775
No 28
>PF06404 PSK: Phytosulfokine precursor protein (PSK); InterPro: IPR009438 This family consists of several plant specific phytosulfokine precursor proteins. Phytosulfokines, are active as either a pentapeptide or a C-terminally truncated tetrapeptide. These compounds were first isolated because of their ability to stimulate cell division in somatic embryo cultures of Asparagus officinalis [].; GO: 0008083 growth factor activity, 0008283 cell proliferation, 0005576 extracellular region
Probab=61.41 E-value=8.6 Score=26.25 Aligned_cols=22 Identities=14% Similarity=-0.096 Sum_probs=14.4
Q ss_pred HHHHHHHhhhhcccccccCCCC
Q 029020 10 ALPVLCIMGMAKAGTITELPSH 31 (200)
Q Consensus 10 ~ll~~~~~~~~~~~~~~~~~~~ 31 (200)
|||++++++.+.|+|+.|+...
T Consensus 2 LLL~~~~~~~~~AARp~p~~~~ 23 (81)
T PF06404_consen 2 LLLLCSSSTSAAAARPLPASQG 23 (81)
T ss_pred chHHHHHhhHhhhcCCCCCccc
Confidence 4555566666789998765543
No 29
>PF05887 Trypan_PARP: Procyclic acidic repetitive protein (PARP); InterPro: IPR008882 This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of T. brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated [].; GO: 0016020 membrane; PDB: 2X34_B 2X32_B.
Probab=56.38 E-value=3.7 Score=30.72 Aligned_cols=19 Identities=26% Similarity=0.188 Sum_probs=0.0
Q ss_pred Ch-hHhHHHHHHHHH-HHhhh
Q 029020 1 MA-RIANLLLALPVL-CIMGM 19 (200)
Q Consensus 1 m~-~~~~~~~~ll~~-~~~~~ 19 (200)
|+ |++.||.|||+. .+|+.
T Consensus 1 m~pr~l~~LavLL~~A~Lfag 21 (143)
T PF05887_consen 1 MTPRHLCLLAVLLFGAALFAG 21 (143)
T ss_dssp ---------------------
T ss_pred Ccccccccccccccccccccc
Confidence 44 899999998877 44444
No 30
>PLN02749 Uncharacterized protein At1g47420
Probab=53.14 E-value=1e+02 Score=23.67 Aligned_cols=59 Identities=12% Similarity=0.168 Sum_probs=42.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhcc
Q 029020 102 QQPIDDCLQLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAA 164 (200)
Q Consensus 102 ~~al~dC~el~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~ 164 (200)
..|-+.|.|++. .+..|.-.+..+ -+..+.+.+.-.+....-|-++..-..+-+|.|..
T Consensus 64 frAAeAveeFgG-~L~sLrmeidDl---~GlsGEnv~PLPd~~~~Al~tay~rY~~YLdsFgp 122 (173)
T PLN02749 64 FRAAEAVEEFGG-TLVSLRMEIDDL---IGLSGENVKPLPDYIENALETAYQRYAAYLDSFGP 122 (173)
T ss_pred HHHHHHHHHHhh-HHHHHHHHHHHh---cCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCc
Confidence 345667877777 788888888888 54434444444555666677888888999999975
No 31
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=48.73 E-value=18 Score=24.88 Aligned_cols=20 Identities=35% Similarity=0.323 Sum_probs=16.8
Q ss_pred ChhHhHHHHHHHHHHHhhhh
Q 029020 1 MARIANLLLALPVLCIMGMA 20 (200)
Q Consensus 1 m~~~~~~~~~ll~~~~~~~~ 20 (200)
|||-+.++++|.|..-|++|
T Consensus 1 MaRRlwiLslLAVtLtVALA 20 (100)
T PF05984_consen 1 MARRLWILSLLAVTLTVALA 20 (100)
T ss_pred CchhhHHHHHHHHHHHHHhh
Confidence 89999999999888777664
No 32
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=41.72 E-value=41 Score=21.42 Aligned_cols=29 Identities=31% Similarity=0.453 Sum_probs=22.8
Q ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHH
Q 029020 96 DLKPREQQPIDDCLQLMGDSIDRLSKSVQ 124 (200)
Q Consensus 96 ~~~~~~~~al~dC~el~~~a~~~L~~a~~ 124 (200)
..+..+..+++.|.+-|-++-..+.....
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778899999999999999888876554
No 33
>PF10360 DUF2433: Protein of unknown function (DUF2433); InterPro: IPR018829 This entry represents a conserved domain of 120 residues from a family fungal proteins. Their function is not known.
Probab=40.01 E-value=51 Score=24.68 Aligned_cols=52 Identities=13% Similarity=0.229 Sum_probs=33.6
Q ss_pred hhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHH---HHHHHHHHHHHHHHhhhhhh
Q 029020 140 HISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVS---NVAEVTSNALALVNQLAKTH 198 (200)
Q Consensus 140 ~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~---~~~~L~snaLaii~~l~~~~ 198 (200)
+.+.-+..|+++ .+.|.+.=..|+..+...+. .-.+|..++|.|+.+++...
T Consensus 13 s~e~yR~Kl~~~-------k~~F~~vW~~VK~~ve~~i~~~~~q~~LL~~AL~v~~kiP~~~ 67 (132)
T PF10360_consen 13 SFEHYRSKLSAS-------KASFGEVWETVKGQVEEAIDPNEAQRNLLENALSVFDKIPISA 67 (132)
T ss_pred CHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 456666666666 45555532234555544443 36899999999999997653
No 34
>COG5510 Predicted small secreted protein [Function unknown]
Probab=38.85 E-value=41 Score=20.13 Aligned_cols=21 Identities=14% Similarity=0.058 Sum_probs=13.2
Q ss_pred ChhHhHHHHHHHHHHHhhhhc
Q 029020 1 MARIANLLLALPVLCIMGMAK 21 (200)
Q Consensus 1 m~~~~~~~~~ll~~~~~~~~~ 21 (200)
|-|+.-+++++|+++++..++
T Consensus 2 mk~t~l~i~~vll~s~llaaC 22 (44)
T COG5510 2 MKKTILLIALVLLASTLLAAC 22 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHh
Confidence 445556666667777766644
No 35
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=37.10 E-value=2.2e+02 Score=22.88 Aligned_cols=86 Identities=15% Similarity=0.175 Sum_probs=55.7
Q ss_pred ccCCCCCChhhHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cccccHHHHHHHHHHHHHHH
Q 029020 40 TSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLK-PREQQPIDDCLQLMGDSIDR 118 (200)
Q Consensus 40 ~~C~~T~~p~~C~~tL~~~~~s~~~d~~~l~~~ai~~a~~~~~~a~~~~~~l~~~~~~~-~~~~~al~dC~el~~~a~~~ 118 (200)
.-|. +.|+..|.. ++-..+..-.|-.+=++-+..-+.++...++..++.+..-.+.+ ......|.+=.|--.++.++
T Consensus 5 ~gCq-saYY~amEk-vG~hKRdilvdrVe~Ardsq~eaqeQF~sALe~f~sl~~~~ggdLe~~Y~~ln~~ye~s~~~A~~ 82 (201)
T PF11172_consen 5 TGCQ-SAYYSAMEK-VGVHKRDILVDRVEDARDSQQEAQEQFKSALEQFKSLVNFDGGDLEDKYNALNDEYESSEDAAEE 82 (201)
T ss_pred HHhH-HHHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4577 568888888 55555545566667788899999999999999888887644433 22334444444444445555
Q ss_pred HHHHHHHHh
Q 029020 119 LSKSVQELR 127 (200)
Q Consensus 119 L~~a~~al~ 127 (200)
+.+-+.+++
T Consensus 83 V~~RI~~vE 91 (201)
T PF11172_consen 83 VSDRIDAVE 91 (201)
T ss_pred HHHHHHHHH
Confidence 555555553
No 36
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=35.58 E-value=17 Score=17.50 Aligned_cols=8 Identities=50% Similarity=0.725 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 029020 7 LLLALPVL 14 (200)
Q Consensus 7 ~~~~ll~~ 14 (200)
++++|+++
T Consensus 4 ~vIIlvvL 11 (19)
T PF13956_consen 4 LVIILVVL 11 (19)
T ss_pred ehHHHHHH
Confidence 33443333
No 37
>PF08138 Sex_peptide: Sex peptide (SP) family; InterPro: IPR012608 This family consists of Sex Peptides (SP) that are found in Drosophila. On mating, Drosophila females decreases her remating rate and increases her egg-laying rate due, in part, to the transfer of SP from the male to the female. SP are found in seminal fluids transferred from the male to the female during mating. The male seminal fluid proteins are referred to as accessory gland proteins (Acps). The SP is one of the most interesting Acps and plays an important role in reproduction [].; GO: 0005179 hormone activity, 0046008 regulation of female receptivity, post-mating, 0005576 extracellular region; PDB: 2LAQ_A.
Probab=35.26 E-value=12 Score=23.33 Aligned_cols=39 Identities=13% Similarity=0.125 Sum_probs=7.3
Q ss_pred HHHHHHHHHhhhhcc-----cccccCCCCCchhHHHHccCCCCCC
Q 029020 8 LLALPVLCIMGMAKA-----GTITELPSHNGDSIFIETSCKSTRY 47 (200)
Q Consensus 8 ~~~ll~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~C~~T~~ 47 (200)
+++||+++++.++.+ ++.++ +..-.+...++.+|.-..-
T Consensus 5 ~~llllvlllGla~s~~wp~~~r~~-~~~i~sp~~r~KWCRLNlG 48 (56)
T PF08138_consen 5 IFLLLLVLLLGLAQSWEWPWQRRTT-KFPIPSPNDRDKWCRLNLG 48 (56)
T ss_dssp -----------------S---S----S-SSSS-STTSS--SS---
T ss_pred HHHHHHHHHHHHHhcccccccCCCC-CCCCCCCCcHHHhhhhccC
Confidence 344555567777766 54421 2223455667788875443
No 38
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=31.27 E-value=1.8e+02 Score=22.23 Aligned_cols=22 Identities=23% Similarity=0.582 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 029020 105 IDDCLQLMGDSIDRLSKSVQEL 126 (200)
Q Consensus 105 l~dC~el~~~a~~~L~~a~~al 126 (200)
|++|..-+..++..|+.++..+
T Consensus 2 L~~cV~SL~~S~~lL~~Si~~L 23 (153)
T PF08287_consen 2 LSNCVSSLRSSVQLLQSSIETL 23 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777777766666
No 39
>PF10792 DUF2605: Protein of unknown function (DUF2605); InterPro: IPR019728 This entry represents a protein conserved in Cyanobacteria. The function is not known.
Probab=30.49 E-value=1.8e+02 Score=20.64 Aligned_cols=53 Identities=19% Similarity=0.175 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHhhhchHHHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 029020 140 HISNVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALVNQL 194 (200)
Q Consensus 140 ~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~~~v~~~~~~~~~L~snaLaii~~l 194 (200)
-.+|.+.|.+-.-+--++|.+.|-. ..-...+..+++...+=+.-+-++++.-
T Consensus 15 LLeDF~yWF~Rs~~LLe~e~~~fls--~~eQ~~Ll~Rv~qaq~ev~aa~~Lf~At 67 (98)
T PF10792_consen 15 LLEDFQYWFSRSRELLETEPISFLS--PEEQSDLLERVKQAQQEVNAARALFQAT 67 (98)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999999965 3345778888888888888888877654
No 40
>PF03487 IL13: Interleukin-13; InterPro: IPR020470 Interleukin-13 (IL-13) is a pleiotropic cytokine which may be important in the regulation of the inflammatory and immune responses []. It inhibits inflammatory cytokine production and synergises with IL-2 in regulating interferon-gamma synthesis. The sequences of IL-4 and IL-13 are distantly related.; PDB: 3G6D_A 3L5W_J 3BPO_A 1GA3_A 1IK0_A 3L5X_A 3L5Y_A 1IJZ_A 3LB6_B.
Probab=30.37 E-value=57 Score=19.12 Aligned_cols=17 Identities=41% Similarity=0.941 Sum_probs=0.0
Q ss_pred HHHHHhhhchHHHHhhhcc
Q 029020 146 TWVSAALTDDDTCLDGLAA 164 (200)
Q Consensus 146 twLSaalt~~~TC~Dgf~~ 164 (200)
-|+..++. -||..|+..
T Consensus 3 lwlt~via--ltClggLas 19 (43)
T PF03487_consen 3 LWLTVVIA--LTCLGGLAS 19 (43)
T ss_dssp -------------------
T ss_pred HHHHHHHH--HHHhcccCC
Confidence 47777765 799999976
No 41
>PF12438 DUF3679: Protein of unknown function (DUF3679) ; InterPro: IPR020534 This entry contains proteins with no known function.
Probab=24.97 E-value=56 Score=20.67 Aligned_cols=21 Identities=24% Similarity=0.305 Sum_probs=15.8
Q ss_pred HhHHHHHHHHHHHhhhhcccc
Q 029020 4 IANLLLALPVLCIMGMAKAGT 24 (200)
Q Consensus 4 ~~~~~~~ll~~~~~~~~~~~~ 24 (200)
++-+++++++.+++.++.|+.
T Consensus 2 ~~~~~~il~~gVl~Gmq~An~ 22 (56)
T PF12438_consen 2 CILLVIILFFGVLLGMQQANH 22 (56)
T ss_pred chHHHHHHHHHHHHhHHHHHh
Confidence 455677778889999987775
No 42
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=20.48 E-value=2.2e+02 Score=17.32 Aligned_cols=45 Identities=13% Similarity=0.282 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcchhhhhhHHHHHHHHhhhchHHHHhhhcc
Q 029020 112 MGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAA 164 (200)
Q Consensus 112 ~~~a~~~L~~a~~al~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~ 164 (200)
|+.++.+|...+..| .+++. ..++....-.-++.-..-|.+-+.+
T Consensus 1 fEe~~~~Le~Iv~~L---e~~~~-----sLdes~~lyeeg~~l~~~c~~~L~~ 45 (53)
T PF02609_consen 1 FEEAMERLEEIVEKL---ESGEL-----SLDESLKLYEEGMELIKKCQERLEE 45 (53)
T ss_dssp HHHHHHHHHHHHHHH---HTT-S------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH---HcCCC-----CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888888888888 43321 4666666666677777778777655
Done!