BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029022
         (200 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
          OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
          Length = 153

 Score = 60.1 bits (144), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)

Query: 23 KKEEETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCE 82
          KK ++   + +KV M CE C RKV R+++G +GV  +T + KA KV V G   DP KV  
Sbjct: 20 KKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVG-YVDPNKVVA 78

Query: 83 RLQKKSGRKVELISPLP 99
          R+  ++G+KVEL   +P
Sbjct: 79 RMSHRTGKKVELWPYVP 95


>sp|Q6CIG2|CCS1_KLULA Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis
          (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
          NRRL Y-1140 / WM37) GN=CCS1 PE=3 SV=1
          Length = 245

 Score = 37.0 bits (84), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 25 EEETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERL 84
          +E   E    V+MHCE+C   + + LK   G+ ++T D K + + V+G  A P  +   L
Sbjct: 5  DENDFEATYAVEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAA-PSAIINAL 63

Query: 85 QKKSGR 90
           K  GR
Sbjct: 64 -KNCGR 68


>sp|Q75DD6|CCS1_ASHGO Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii
          (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
          Y-1056) GN=CCS1 PE=3 SV=1
          Length = 238

 Score = 37.0 bits (84), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 26 EETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQ 85
           E+ E    V MHC  C  +++RAL+   GV ++T D +   V V+G  A P  + + L 
Sbjct: 5  SESFEATYAVPMHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRG-IAPPSSIVQAL- 62

Query: 86 KKSGRKVEL 94
            +GR   L
Sbjct: 63 AATGRDAIL 71


>sp|Q9KPZ7|COPA_VIBCH Copper-exporting P-type ATPase A OS=Vibrio cholerae serotype O1
           (strain ATCC 39315 / El Tor Inaba N16961) GN=copA PE=3
           SV=1
          Length = 915

 Score = 34.7 bits (78), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 4   ENKEEQKKEEAKKEKKEEEKKEEETPEIVLKVDMHCEACARKVARALKGFEGVDDITADS 63
           + KE    +       E  +   +T  +++K  M C +C   V +AL   EGV     + 
Sbjct: 149 DEKETDTPDAENSSNTEATEASSQTLSLLIK-GMTCASCVASVEKALLSVEGVQSAQVNL 207

Query: 64  KASKVVVKGKTADPIKVCERLQKKSGRKVELI 95
                +V+G  A+P  +   +Q  SG + E++
Sbjct: 208 TEQSALVRGIFANPQPLLNAIQ-SSGYQAEIL 238


>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
          (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
          IGC 2968) GN=CCS1 PE=3 SV=2
          Length = 250

 Score = 33.9 bits (76), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 30 EIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQK 86
          EIV  V M C++C   V+ +LK   G+     D K++ V  +G +  P ++ + +Q 
Sbjct: 6  EIVFAVPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEG-SVPPSEIVKAIQS 61


>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1
           SV=1
          Length = 1492

 Score = 30.0 bits (66), Expect = 9.4,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 18/159 (11%)

Query: 8   EQKKEEAKKEKKEEEKKEEETPE---IVLKVD-MHCEACARKVARALKGFEGVDDITADS 63
           E+ K    K  +  ++K    P    I   +D MHC++C   +  AL   + V  I    
Sbjct: 253 ERLKSTPVKSSEGSQQKSPAYPSDSAITFTIDGMHCKSCVSNIESALSTLQYVSSIVVSL 312

Query: 64  KASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKPPPPDADDQEKKEQQKVEKKEEP 123
           +    +VK   +  +   E L+K     +E +SP        ++ +           ++ 
Sbjct: 313 ENRSAIVKYNAS--LVTPEILRK----AIEAVSPGQYRVSISSEVESPTSSPSSSSLQKM 366

Query: 124 PAAIT-------VVLNVR-MHCEACAQGLRKRIRKIQGI 154
           P  +        VV+N+  M C +C Q +   I K  G+
Sbjct: 367 PLNLVSQPLTQEVVININGMTCNSCVQSIEGVISKKPGV 405


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.133    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,110,406
Number of Sequences: 539616
Number of extensions: 3634650
Number of successful extensions: 81037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 475
Number of HSP's that attempted gapping in prelim test: 60498
Number of HSP's gapped (non-prelim): 13521
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)