BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029023
MFSTLKFQSANPTIDHDFNNYSFSRHHGCSLHRLPLYLRPPLRFRRLSAQSEYAASSEPS
VSSHYTTSVGSSSSSSLQLSQWNLTHRHILVLNVIACAAAVSATWLFFSAIPTLLALKGA
AESLEKLMDVTREELPETMAAVRLSGMEISDLTMELSDLGQEITQGVRSSTKAVRIAEER
LRQLTNMNPSGGSEPENWTN

High Scoring Gene Products

Symbol, full name Information P value
AT5G09995 protein from Arabidopsis thaliana 1.5e-42
AT1G08530 protein from Arabidopsis thaliana 1.6e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029023
        (200 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006593 - symbol:AT5G09995 "AT5G09995" speci...   450  1.5e-42   1
TAIR|locus:2025630 - symbol:AT1G08530 "AT1G08530" species...   261  1.6e-22   1


>TAIR|locus:505006593 [details] [associations]
            symbol:AT5G09995 "AT5G09995" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 UniGene:At.32428 UniGene:At.32430
            IPI:IPI00518666 RefSeq:NP_974759.1 PRIDE:F4KFF0
            EnsemblPlants:AT5G09995.2 GeneID:830861 KEGG:ath:AT5G09995
            OMA:DTMAAVR PhylomeDB:F4KFF0 Uniprot:F4KFF0
        Length = 257

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 100/197 (50%), Positives = 122/197 (61%)

Query:     1 MFSTLKFQSA------NPTIDHDF--NNYSFSRHHGCSLHXXXXXXXXXXXXXXXSAQSE 52
             +FS  K QS       NP + + F   N SF R    +L                ++ + 
Sbjct:     2 LFSPSKLQSPQSLISWNPILHNGFIDKNLSFRRR--VTLRLASPISRLTKGSDSIASSTP 59

Query:    53 YAASSEPXXXXXXXXXXXXXXXXXXXXXXWNLTHRHILVLNVIACAAAVSATWLFFSAIP 112
              A  S P                      W  T +H ++LNV+AC  A+SA+WLFF+AIP
Sbjct:    60 SALYSNPQEPSISSQLTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIP 119

Query:   113 TLLALKGAAESLEKLMDVTREELPETMAAVRLSGMEISDLTMELSDLGQEITQGVRSSTK 172
             TLLA K AAESLEKL+DVTREELP+TMAAVRLSGMEISDLTMELSDLGQ ITQGV+SST+
Sbjct:   120 TLLAFKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTR 179

Query:   173 AVRIAEERLRQLTNMNP 189
             A+R+AE+RLR+LTNMNP
Sbjct:   180 AIRVAEDRLRRLTNMNP 196


>TAIR|locus:2025630 [details] [associations]
            symbol:AT1G08530 "AT1G08530" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009536 "plastid" evidence=IDA] EMBL:CP002684 GO:GO:0009941
            EMBL:AK229523 IPI:IPI00542061 RefSeq:NP_172329.2 UniGene:At.28799
            STRING:Q0WNC2 PaxDb:Q0WNC2 PRIDE:Q0WNC2 EnsemblPlants:AT1G08530.1
            GeneID:837375 KEGG:ath:AT1G08530 TAIR:At1g08530 eggNOG:NOG273973
            InParanoid:Q0WNC2 OMA:HSINPLA PhylomeDB:Q0WNC2
            ProtClustDB:CLSN2690793 Genevestigator:Q0WNC2 Uniprot:Q0WNC2
        Length = 257

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 55/102 (53%), Positives = 73/102 (71%)

Query:    83 NLTHRHILVLNVIACAAAVSATWLFFSAIPTLLALKGAAESLEKLMDVTREELPETMAAV 142
             +L+ +  L+L  I C  +V+ T L  +AIPTL+A+  AA S  KL D  R+ELP T+AAV
Sbjct:    99 SLSDQAFLLLAFIVCTTSVAFTSLVITAIPTLVAMGRAATSFAKLADTARKELPSTLAAV 158

Query:   143 RLSGMEISDLTMELSDLGQEITQGVRSSTKAVRIAEERLRQL 184
             RLSGMEISDLT+ELSDL Q+IT G+  S KAV+ AE  ++Q+
Sbjct:   159 RLSGMEISDLTLELSDLSQDITDGINKSAKAVQAAEAGIKQI 200


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.126   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       163   0.00084  107 3  11 23  0.39    32
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  149 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.80u 0.08s 14.88t   Elapsed:  00:00:01
  Total cpu time:  14.80u 0.08s 14.88t   Elapsed:  00:00:01
  Start:  Fri May 10 03:04:25 2013   End:  Fri May 10 03:04:26 2013

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