BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029025
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P45350|DRTS_DAUCA Bifunctional dihydrofolate reductase-thymidylate synthase OS=Daucus
carota PE=2 SV=1
Length = 528
Score = 196 bits (497), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 106/123 (86%)
Query: 78 RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 137
+R YQVVVAAT +MGIGKDGKLPW LPSD+KFFK +TM+TSDP KRNAV+MGRKTWESI
Sbjct: 21 QRTYQVVVAATQNMGIGKDGKLPWRLPSDMKFFKDVTMTTSDPLKRNAVIMGRKTWESIP 80
Query: 138 PLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQ 197
+RPLPGRLNVVLT SGSF+IA++ENV IC S+ ALELLA PYC S+EKVFVIGGGQ
Sbjct: 81 IQHRPLPGRLNVVLTRSGSFDIATVENVVICGSMISALELLAGSPYCVSVEKVFVIGGGQ 140
Query: 198 ILR 200
I R
Sbjct: 141 IYR 143
>sp|O81395|DRTS_MAIZE Bifunctional dihydrofolate reductase-thymidylate synthase OS=Zea
mays GN=DRTS PE=2 SV=1
Length = 521
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 70 NASMHLRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMG 129
N R +R YQVVVA T DMGIGKDG LPW LP DLKFFK+LT++TSDP K+NAV+MG
Sbjct: 7 NGDSQGRPQRNYQVVVAGTRDMGIGKDGVLPWKLPGDLKFFKELTLTTSDPVKKNAVIMG 66
Query: 130 RKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEK 189
RKTWESI RPLPGRLNV+LT SGSF+ A++ENV IC S+ ALELLA PYC SIEK
Sbjct: 67 RKTWESIPVKSRPLPGRLNVILTRSGSFDFATVENVVICGSMESALELLASTPYCLSIEK 126
Query: 190 VFVIGGGQILR 200
VFVIGGGQ+LR
Sbjct: 127 VFVIGGGQVLR 137
>sp|Q05762|DRTS1_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 1
OS=Arabidopsis thaliana GN=THY-1 PE=2 SV=2
Length = 519
Score = 193 bits (491), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 111/139 (79%), Gaps = 2/139 (1%)
Query: 64 STLSNDNASMHLRA--RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPG 121
+T ND+ + L + +R YQVVVAAT +MGIGKDGKLPWNLP+DLKFFK +T++TSD
Sbjct: 3 TTTLNDSVTTTLASEPQRTYQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDITLTTSDSS 62
Query: 122 KRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEP 181
K+NAVVMGRKTWESI YRPL GRLNVVLT SG F+IA+ ENV C S+ AL+LLA P
Sbjct: 63 KKNAVVMGRKTWESIPIKYRPLSGRLNVVLTRSGGFDIANTENVVTCSSVDSALDLLAAP 122
Query: 182 PYCSSIEKVFVIGGGQILR 200
PYC SIE+VFVIGGG ILR
Sbjct: 123 PYCLSIERVFVIGGGDILR 141
>sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Glycine max PE=1 SV=1
Length = 530
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 103/123 (83%)
Query: 78 RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 137
+R YQVVVAAT D GIGKDGKLPW LP+DLKFFK++TM TS+PGK+NA+VMGRKTWESI
Sbjct: 24 QRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKTSEPGKKNAIVMGRKTWESIP 83
Query: 138 PLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQ 197
YRPL GRLNVVLT SGSF+IA+ ENV IC S+ ALELLA PY SIEKVFVIGGGQ
Sbjct: 84 LEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYSLSIEKVFVIGGGQ 143
Query: 198 ILR 200
I R
Sbjct: 144 IFR 146
>sp|Q05763|DRTS2_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 2
OS=Arabidopsis thaliana GN=THY-2 PE=2 SV=2
Length = 565
Score = 190 bits (483), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 111/146 (76%), Gaps = 1/146 (0%)
Query: 55 FYVGVNNNMSTLSNDNASMHLRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT 114
F V ++ +TL N N M + + YQVVVAAT +MGIGKDGKLPWNLP+DLKFFK LT
Sbjct: 41 FKVSISTMANTL-NGNVIMTSKPQSTYQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDLT 99
Query: 115 MSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLA 174
+STSD K+NAVVMGRKTWESI YRPL GRLNVVL+ S F+IA+ ENV C SI A
Sbjct: 100 LSTSDSAKKNAVVMGRKTWESIPKKYRPLSGRLNVVLSRSSGFDIANTENVVTCSSIDSA 159
Query: 175 LELLAEPPYCSSIEKVFVIGGGQILR 200
L+LLA PP+ SIEKVFVIGGG ILR
Sbjct: 160 LDLLAAPPFSLSIEKVFVIGGGDILR 185
>sp|Q2QRX6|DRTS_ORYSJ Putative bifunctional dihydrofolate reductase-thymidylate synthase
OS=Oryza sativa subsp. japonica GN=Os12g0446900 PE=3
SV=2
Length = 494
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 91/110 (82%)
Query: 91 MGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVV 150
MGIGKDG LPW LP DLKFFK +T++TSDP K+NAVVMGRKTWESI +RPLPGRLNV+
Sbjct: 1 MGIGKDGTLPWKLPGDLKFFKDITVTTSDPSKKNAVVMGRKTWESIPLKFRPLPGRLNVI 60
Query: 151 LTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 200
LT SGSF+ A+ ENV IC S+ AL+LLA PYC ++EK F+IGGG+ILR
Sbjct: 61 LTRSGSFDFATAENVVICGSLDSALQLLATTPYCLTVEKTFIIGGGEILR 110
>sp|Q27793|DRTS_TRYCR Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Trypanosoma cruzi PE=1 SV=2
Length = 521
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 78/141 (55%), Gaps = 19/141 (13%)
Query: 77 ARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS------TSDPGKRNAVVMGR 130
A R + +VVA GIG +PWN+P D+KFF+ LT P KRNAVVMGR
Sbjct: 19 ALRAFSLVVAVDEHGGIGDGRSIPWNVPEDMKFFRDLTTKLRGKNVKPSPAKRNAVVMGR 78
Query: 131 KTWESISPLYRPLPGRLNVVLTHS-------------GSFNIASLENVEICRSIHLALEL 177
KTW+SI P +RPLPGRLNVVL+ + N+ + V + + AL L
Sbjct: 79 KTWDSIPPKFRPLPGRLNVVLSSTLTTQHLLDGLPDEEKRNLHADSIVAVNGGLEQALRL 138
Query: 178 LAEPPYCSSIEKVFVIGGGQI 198
LA P Y SIE V+ IGGG +
Sbjct: 139 LASPNYTPSIETVYCIGGGSV 159
>sp|P07807|DYR_YEAST Dihydrofolate reductase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DFR1 PE=1 SV=2
Length = 211
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+V +MGIG G LPW LPS++K+F+Q+T T DP K+NA++MGRKTWESI P +RP
Sbjct: 11 IVACLQPEMGIGFRGGLPWRLPSEMKYFRQVTSLTKDPNKKNALIMGRKTWESIPPKFRP 70
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLA-EPPYCSSIEKVFVIGGGQI 198
LP R+NV+++ S + + I +S LA ++ E + +E+++VIGGG++
Sbjct: 71 LPNRMNVIISRSFKDDFVHDKERSIVQSNSLANAIMNLESNFKEHLERIYVIGGGEV 127
>sp|Q93341|DYR_CAEEL Putative dihydrofolate reductase OS=Caenorhabditis elegans
GN=dhfr-1 PE=3 SV=1
Length = 189
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISP 138
R ++VA + GIGK+G LPW + D+++F +T + SD KRNAV+MGRK WESI
Sbjct: 2 RKMNLIVAMDAEGGIGKNGVLPWRIKKDMQYFASVTKNVSDQSKRNAVLMGRKCWESIPV 61
Query: 139 LYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
RPL GRLN+VL S ++ + S+ A++LL+EPP+ SIE ++ IGG +I
Sbjct: 62 TRRPLAGRLNIVL--SRQLPAQKSDDYIVVNSLEAAMKLLSEPPFVDSIETIWNIGGAEI 119
>sp|Q27783|DRTS_TRYBB Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Trypanosoma brucei brucei PE=1 SV=1
Length = 527
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 19/141 (13%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS------TSDPGKRNAVVMGRKT 132
RP+ VVVA+ GIG G +PW +P D+++F+++T + P KRNAVVMGRKT
Sbjct: 27 RPFSVVVASDEKGGIGDGGTIPWEIPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKT 86
Query: 133 WESISPLYRPLPGRLNVVLTHSGSFNI-------------ASLENVEICRSIHLALELLA 179
W+S+ P +RPL RLNVVL+ S + A+ + V + + AL +L
Sbjct: 87 WDSLPPKFRPLSNRLNVVLSRSATKEQLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLV 146
Query: 180 EPPYCSSIEKVFVIGGGQILR 200
+ SSIE VF IGGG I +
Sbjct: 147 SKEHTSSIETVFCIGGGTIYK 167
>sp|P16126|DRTS_LEIAM Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Leishmania amazonensis PE=3 SV=1
Length = 520
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDP---GKRNAVVMGRKTW 133
R + +VVA GIG +PW +P D+ FFK T + P KRNAVVMGRKTW
Sbjct: 25 RAFSIVVALDKQHGIGDGESIPWRVPEDMAFFKDQTTLLRNKKPPTDKKRNAVVMGRKTW 84
Query: 134 ESISPLYRPLPGRLNVVLTHSGSFN------------IASLENVEICRSIHLALELLAEP 181
ES+ +RPL GRLNVVL+ + A+ + V + + A+ LLA P
Sbjct: 85 ESVPVKFRPLKGRLNVVLSSKATVEELLAPLPEEKRAAAAQDIVVVNGGLAAAVRLLARP 144
Query: 182 PYCSSIEKVFVIGGGQI 198
PYCSSIE + +GG Q+
Sbjct: 145 PYCSSIETAYCVGGAQV 161
>sp|P28019|DYR_AEDAL Dihydrofolate reductase OS=Aedes albopictus GN=DHFR PE=3 SV=1
Length = 186
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISP 138
+ + ++VA + GIG G LPW L +LK+F ++T D GKRNA++MGRKT+ +
Sbjct: 2 KKFSLIVAVCANGGIGIKGDLPWRLRQELKYFSRMTKKIQDSGKRNAIIMGRKTYFGVPE 61
Query: 139 LYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
RPLP RLN++LT S N A V +C S+ AL+ L E P + IE V+++GG +
Sbjct: 62 SKRPLPERLNIILTRDPSAN-AYPSEVMVCTSMQEALKKLDEAPLVNEIENVWIVGGNAV 120
Query: 199 LR 200
+
Sbjct: 121 YK 122
>sp|P22906|DYR_CANAX Dihydrofolate reductase OS=Candida albicans GN=DFR1 PE=1 SV=4
Length = 192
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+V A +GIG GK+PW L ++++FK +T T+ P RNAV+MGRKTWESI +RP
Sbjct: 9 IVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRP 68
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LP RLN++L+ S I +N+ SI +L L+ S +E+VF+IGG +I
Sbjct: 69 LPDRLNIILSRSYENKIID-DNIIHASSIESSLNLV------SDVERVFIIGGAEI 117
>sp|Q23695|DRTS_CRIFA Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Crithidia fasciculata PE=3 SV=1
Length = 515
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 75/137 (54%), Gaps = 19/137 (13%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDP---GKRNAVVMGRKTW 133
R + +VVAA GIG +PW +P L FFK T + P KRNAVVMGRKTW
Sbjct: 25 RAFSIVVAADQQHGIGDGETIPWTVPETLAFFKDQTTLLRNKKPPTEKKRNAVVMGRKTW 84
Query: 134 ESISPL-YRPLPGRLNVVLTHSGSFN-----------IASLENVEICRSIHLALELLAEP 181
E PL +RPL GRLNVVL+ + A+ +V I + AL LLA P
Sbjct: 85 EV--PLKFRPLKGRLNVVLSCRRPVDDLLAQLPEEKRAAAAADVVINGGLKEALHLLARP 142
Query: 182 PYCSSIEKVFVIGGGQI 198
PYCSSIE + IGG ++
Sbjct: 143 PYCSSIETAYCIGGARV 159
>sp|P07382|DRTS_LEIMA Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Leishmania major GN=LmjF06.0860 PE=1 SV=1
Length = 520
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 73/137 (53%), Gaps = 17/137 (12%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDP---GKRNAVVMGRKTW 133
R + +VVA GIG +PW +P D+ FFK T + P KRNAVVMGRKTW
Sbjct: 25 RAFSIVVALDMQHGIGDGESIPWRVPEDMTFFKNQTTLLRNKKPPTEKKRNAVVMGRKTW 84
Query: 134 ESISPLYRPLPGRLNVVLTHSGSFN--IASLENVEICR----------SIHLALELLAEP 181
ES+ +RPL GRLN+VL+ + +A L + + AL LLA P
Sbjct: 85 ESVPVKFRPLKGRLNIVLSSKATVEELLAPLPEGQRAAAAQDVVVVNGGLAEALRLLARP 144
Query: 182 PYCSSIEKVFVIGGGQI 198
YCSSIE + +GG Q+
Sbjct: 145 LYCSSIETAYCVGGAQV 161
>sp|Q07801|DYR_CRYNJ Dihydrofolate reductase OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=DFR1 PE=1
SV=1
Length = 229
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS---TSDPGKRNAVVMGRKTWESISPL 139
VVAAT + GIG +G LPW LP ++K+F ++T +SDP ++N V+MGRKTWESI
Sbjct: 14 AVVAATAENGIGLNGGLPWRLPGEMKYFARVTTGETPSSDPSEQNVVIMGRKTWESIPSR 73
Query: 140 YRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
+RPL R NVV++ G ++ + EN + I AL L ++F+IGG +
Sbjct: 74 FRPLKNRRNVVISGKG-VDLGTAENSTVYTDIPSALSALRSTTESGHSPRIFLIGGATL 131
>sp|Q920D2|DYR_RAT Dihydrofolate reductase OS=Rattus norvegicus GN=Dhfr PE=2 SV=3
Length = 187
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 79/129 (61%), Gaps = 15/129 (11%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWNL-PSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 137
RP +VA + +MGIGK+G LPW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDLPWPLLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 62
Query: 138 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 191
RPL R+N+VL+ G+ +A +S+ AL+L+ +P S ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPQGAHFLA--------KSLDDALKLIEQPELASKVDMVW 114
Query: 192 VIGGGQILR 200
V+GG + +
Sbjct: 115 VVGGSSVYQ 123
>sp|P09503|DYR_SHV21 Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
11) GN=DHFR PE=3 SV=1
Length = 187
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 17/125 (13%)
Query: 84 VVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+VA +MGIGK G LPW L +D K F+++T ++S P K+N V+MG+KTW SI RP
Sbjct: 8 IVAVAQNMGIGKQGNLPWPRLMNDFKHFQRMTTTSSVPDKQNLVIMGKKTWFSIPEKNRP 67
Query: 143 LPGRLNVVLT-------HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 195
L GR+NVVL+ H F + +S+ AL+L +P + ++ V++IGG
Sbjct: 68 LKGRINVVLSKELKELPHRAHF---------LAKSLDDALKLTEQPELANKVDMVWIIGG 118
Query: 196 GQILR 200
+ +
Sbjct: 119 SSVYK 123
>sp|P17719|DYR_DROME Dihydrofolate reductase OS=Drosophila melanogaster GN=Dhfr PE=1
SV=3
Length = 182
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 6/119 (5%)
Query: 81 YQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLY 140
+ ++VA + GIG G LPW + S+LK+F + T TSDP K+NAVVMGRKT+ +
Sbjct: 4 FNLIVAVCENFGIGIRGDLPWRIKSELKYFSRTTKRTSDPTKQNAVVMGRKTYFGVPESK 63
Query: 141 RPLPGRLNVVLTHSGSFNIASL-ENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
RPLP RLN+VL S + + L + V +C ++ A+++L E + +E ++++GG +
Sbjct: 64 RPLPDRLNIVL--STTLQESDLPKGVLLCPNLETAMKILEEQ---NEVENIWIVGGSGV 117
>sp|P00375|DYR_MOUSE Dihydrofolate reductase OS=Mus musculus GN=Dhfr PE=1 SV=3
Length = 187
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 15/129 (11%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 137
RP +VA + +MGIGK+G LPW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 62
Query: 138 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 191
RPL R+N+VL+ G+ +A +S+ AL L+ +P S ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPRGAHFLA--------KSLDDALRLIEQPELASKVDMVW 114
Query: 192 VIGGGQILR 200
++GG + +
Sbjct: 115 IVGGSSVYQ 123
>sp|P04753|DYR_MESAU Dihydrofolate reductase OS=Mesocricetus auratus GN=DHFR PE=2 SV=4
Length = 187
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 77/129 (59%), Gaps = 15/129 (11%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 137
RP +VA + +MGIGK+G PW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDFPWPMLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 62
Query: 138 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 191
RPL R+N+VL+ G+ +A +S+ AL+L+ +P ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPQGAHFLA--------KSLDDALKLIEQPELADKVDMVW 114
Query: 192 VIGGGQILR 200
++GG + +
Sbjct: 115 IVGGSSVYK 123
>sp|P00376|DYR_BOVIN Dihydrofolate reductase OS=Bos taurus GN=DHFR PE=1 SV=3
Length = 187
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 78/129 (60%), Gaps = 15/129 (11%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 137
RP +VA + +MGIGK+G LPW L ++ ++F+++T +S GK+N V+MGRKTW SI
Sbjct: 3 RPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIP 62
Query: 138 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 191
RPL R+N+VL+ G+ +A +S+ ALEL+ +P + ++ V+
Sbjct: 63 EKNRPLKDRINIVLSRELKEPPKGAHFLA--------KSLDDALELIEDPELTNKVDVVW 114
Query: 192 VIGGGQILR 200
++GG + +
Sbjct: 115 IVGGSSVYK 123
>sp|Q9U8B8|DYR_HELVI Dihydrofolate reductase OS=Heliothis virescens GN=DHFR PE=1 SV=1
Length = 185
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ AA +MGIG +G LPW L ++ +F +T S+P K NAV+MGR+TW+ I YRP
Sbjct: 8 LIAAACDNMGIGVNGALPWRLKKEMAYFTTMTSKVSEPTKVNAVIMGRRTWDCIPDKYRP 67
Query: 143 LPGRLNVVLTHS-GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 200
L R+N+VLTH+ S E V + + A++ + IE +VIGG I R
Sbjct: 68 LQDRVNIVLTHNVDSVKENVPEGVMVFPGLDEAIKYIEGR---EDIESTWVIGGSSIYR 123
>sp|P00377|DYR_PIG Dihydrofolate reductase OS=Sus scrofa GN=DHFR PE=1 SV=1
Length = 186
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 77/129 (59%), Gaps = 15/129 (11%)
Query: 79 RPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS 137
RP +VA + +MGIGK+G LPW L ++ K+F+++T ++S GK+N V+MGRKTW SI
Sbjct: 2 RPLNCIVAVSQNMGIGKNGDLPWPPLRNEYKYFQRMTTTSSVEGKQNLVIMGRKTWFSIP 61
Query: 138 PLYRPLPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 191
RPL R+N+VL+ G+ +A +S+ AL+L +P ++ V+
Sbjct: 62 EKNRPLKDRINIVLSRELKEPPQGAHFLA--------KSLDDALKLTEQPELKDKVDMVW 113
Query: 192 VIGGGQILR 200
++GG + +
Sbjct: 114 IVGGSSVYK 122
>sp|P00378|DYR_CHICK Dihydrofolate reductase OS=Gallus gallus GN=DHFR PE=1 SV=1
Length = 189
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 84 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+VA +MGIGKDG LPW L ++ K+F+++T ++ GK+NAV+MG+KTW SI RP
Sbjct: 7 IVAVCQNMGIGKDGNLPWPPLRNEYKYFQRMTSTSHVEGKQNAVIMGKKTWFSIPEKNRP 66
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 200
L R+N+VL S A + +S+ AL LL P S ++ V+++GG + +
Sbjct: 67 LKDRINIVL--SRELKEAPKGAHYLSKSLDDALALLDSPELKSKVDMVWIVGGTAVYK 122
>sp|P16184|DYR_PNECA Dihydrofolate reductase OS=Pneumocystis carinii PE=1 SV=1
Length = 206
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 75 LRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT--MSTSDPGKR-NAVVMGRK 131
+ ++ ++VA T GIG+ LPW L ++ +FK++T + T D + N V+MGRK
Sbjct: 1 MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRK 60
Query: 132 TWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSS---IE 188
TWESI +RPL GR+NVV+T + S ++ + + +S+ ALELL S I
Sbjct: 61 TWESIPLQFRPLKGRINVVITRNESLDLGN--GIHSAKSLDHALELLYRTYGSESSVQIN 118
Query: 189 KVFVIGGGQILR 200
++FVIGG Q+ +
Sbjct: 119 RIFVIGGAQLYK 130
>sp|P00374|DYR_HUMAN Dihydrofolate reductase OS=Homo sapiens GN=DHFR PE=1 SV=2
Length = 187
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 84 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+VA + +MGIGK+G LPW L ++ ++F+++T ++S GK+N V+MG+KTW SI RP
Sbjct: 8 IVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRP 67
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 200
L GR+N+VL S + RS+ AL+L +P + ++ V+++GG + +
Sbjct: 68 LKGRINLVL--SRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYK 123
>sp|P27421|DYR_SHV24 Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
484-77) GN=DHFR PE=3 SV=1
Length = 186
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 18/125 (14%)
Query: 84 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+VA +MGIGK+G LPW L +D K+F+++T S S K+N V+MG+ TW SI RP
Sbjct: 8 IVAVDQNMGIGKNGYLPWPLLTNDFKYFQRMTTS-SVKNKQNLVIMGKNTWFSIPEKNRP 66
Query: 143 LPGRLNVVLT-------HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 195
L R+N+VL+ H F + RS++ AL+L+ +P + + ++ V++IGG
Sbjct: 67 LKDRINLVLSKKLKEIPHGAHF---------LARSLNDALKLIEQPEFVNKVDMVWIIGG 117
Query: 196 GQILR 200
+ +
Sbjct: 118 SSVYK 122
>sp|P22573|DYR_SHV2C Viral dihydrofolate reductase OS=Saimiriine herpesvirus 2 (strain
488) GN=DHFR PE=3 SV=1
Length = 213
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 18/125 (14%)
Query: 84 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+VA +MGIGK G LPW L +D K+F+++T S S K+N V+MG+ TW SI RP
Sbjct: 8 IVAVDQNMGIGKKGHLPWPLLINDFKYFQRMTTS-SVKNKQNLVIMGKNTWFSIPEKNRP 66
Query: 143 LPGRLNVVLT-------HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 195
L R+N+VL+ H F + RS++ AL+L+ +P + +++V++IGG
Sbjct: 67 LKDRINLVLSKKLKEIPHGAHF---------LARSLNDALKLIEQPELVNKVDRVWIIGG 117
Query: 196 GQILR 200
+ +
Sbjct: 118 SSVYK 122
>sp|P12833|DYR3_SALTM Dihydrofolate reductase type 3 OS=Salmonella typhimurium GN=dhfrIII
PE=1 SV=1
Length = 162
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 19/116 (16%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ A H+ IGKD +PW+LP+DL+ FK +T+ GK VVMGR+T+ESI RP
Sbjct: 5 LIAALAHNNLIGKDNLIPWHLPADLRHFKAVTL-----GK--PVVMGRRTFESIG---RP 54
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LPGR NVV++ + + E VE+ S+ AL LL + E+ +IGGGQ+
Sbjct: 55 LPGRRNVVVSRNPQWQA---EGVEVAPSLDAALALL------TDCEEAMIIGGGQL 101
>sp|Q07422|DRTS_TOXGO Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Toxoplasma gondii PE=3 SV=1
Length = 610
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 36/154 (23%)
Query: 78 RRPYQVVVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTSDP---------------- 120
++P +VVA T GIG + LPW +L +D K F ++T +T +
Sbjct: 2 QKPVCLVVAMTPKRGIGINNGLPWPHLTTDFKHFSRVTKTTPEEASRLNGWLPRKFAKTG 61
Query: 121 ---------GKR-NAVVMGRKTWESISPLYRPLPGRLNVVLTHS-GSFNIAS-------L 162
GKR NAVVMGRKTWES+ +RPL RLN+V++ S +IA+
Sbjct: 62 DSGLPSPSVGKRFNAVVMGRKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQ 121
Query: 163 ENVEICRSIHLALELLAEPPYCSSIEKVFVIGGG 196
+ V +C S+ AL LL E Y S++++FV+GG
Sbjct: 122 QRVRVCASLPAALSLLEE-EYKDSVDQIFVVGGA 154
>sp|Q86XF0|DYRL1_HUMAN Dihydrofolate reductase, mitochondrial OS=Homo sapiens GN=DHFRL1
PE=1 SV=1
Length = 187
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 84 VVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
+VA + +MGIGK+G LP L ++ ++F+++T ++S GK+N V+MGRKTW SI RP
Sbjct: 8 IVAVSQNMGIGKNGDLPRPPLRNEFRYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRP 67
Query: 143 LPGRLNVVLTHS------GSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGG 196
L R+N+VL+ G+ +A RS+ AL+L P + ++ ++++GG
Sbjct: 68 LKDRINLVLSRELKEPPQGAHFLA--------RSLDDALKLTERPELANKVDMIWIVGGS 119
Query: 197 QILR 200
+ +
Sbjct: 120 SVYK 123
>sp|Q9CBW1|DYR_MYCLE Dihydrofolate reductase OS=Mycobacterium leprae (strain TN) GN=folA
PE=3 SV=1
Length = 165
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
Query: 93 IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLT 152
IG+DG +PW +P DL FKQLTM + VVMGR+TW+S+ RPLPGR N+VL+
Sbjct: 16 IGRDGGMPWRVPEDLTRFKQLTMG-------HPVVMGRRTWDSLPVGVRPLPGRRNIVLS 68
Query: 153 HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 200
F E E+ S+ + L P +++VIGG QI R
Sbjct: 69 RQIDF---MAEGAEVFGSLEETISNLETEP------EMWVIGGEQIYR 107
>sp|P04174|DYR_NEIGO Dihydrofolate reductase OS=Neisseria gonorrhoeae GN=folA PE=1 SV=1
Length = 162
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 18/116 (15%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ A ++ IG +PW++P D FFK T+ V+MGRKTWES+ +P
Sbjct: 6 IIAACAENLCIGAGNAMPWHIPEDFAFFKVYTLG-------KPVIMGRKTWESLP--VKP 56
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LPGR N+V++ + A E V S+ +AL L C+ E+ ++GG QI
Sbjct: 57 LPGRRNIVISRQADYCAAGAETVA---SLEVALAL------CAGAEEAVIMGGAQI 103
>sp|P11045|DYR_BACSU Dihydrofolate reductase OS=Bacillus subtilis (strain 168) GN=dfrA
PE=1 SV=2
Length = 168
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 19/106 (17%)
Query: 93 IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLT 152
IGKD LPW+LP+DL +FK++T S ++MGRKT+ESI RPLP R N+V+T
Sbjct: 14 IGKDNDLPWHLPNDLAYFKKITSGHS-------IIMGRKTFESIG---RPLPNRKNIVVT 63
Query: 153 HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
+ + + + S+ L++ CS E+ FVIGG Q+
Sbjct: 64 SAPD---SEFQGCTVVSSLKDVLDI------CSGPEECFVIGGAQL 100
>sp|P0A546|DYR_MYCTU Dihydrofolate reductase OS=Mycobacterium tuberculosis GN=folA PE=1
SV=1
Length = 159
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 20/106 (18%)
Query: 93 IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLT 152
IG+ G +PW LP D F+++TM + +VMGR+TW+S+ RPLPGR NVVL+
Sbjct: 14 IGRGGDIPWRLPEDQAHFREITMG-------HTIVMGRRTWDSLPAKVRPLPGRRNVVLS 66
Query: 153 HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
F +AS E+ S+ E L P + +VIGGGQ+
Sbjct: 67 RQADF-MAS--GAEVVGSLE---EALTSP-------ETWVIGGGQV 99
>sp|P0A547|DYR_MYCBO Dihydrofolate reductase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=folA PE=3 SV=1
Length = 159
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 20/106 (18%)
Query: 93 IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLT 152
IG+ G +PW LP D F+++TM + +VMGR+TW+S+ RPLPGR NVVL+
Sbjct: 14 IGRGGDIPWRLPEDQAHFREITMG-------HTIVMGRRTWDSLPAKVRPLPGRRNVVLS 66
Query: 153 HSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
F +AS E+ S+ E L P + +VIGGGQ+
Sbjct: 67 RQADF-MAS--GAEVVGSLE---EALTSP-------ETWVIGGGQV 99
>sp|P31074|DYR_ENTAE Dihydrofolate reductase OS=Enterobacter aerogenes GN=folA PE=3 SV=1
Length = 159
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 20/116 (17%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ A D IG + +PW+LP+DL +FK+ T++ VVMGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWDLPADLAWFKRNTLN-------KPVVMGRLTWESIG---RP 53
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LPGR N+V+ S S + V+ +S+ A+ C E++ VIGGG++
Sbjct: 54 LPGRKNIVI----SSKPGSDDRVQWVKSVDEAIAA------CGDAEEIMVIGGGRV 99
>sp|Q54277|DYR_STAHA Dihydrofolate reductase OS=Staphylococcus haemolyticus GN=dfrD PE=1
SV=1
Length = 166
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 19/116 (16%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++VA IGKD +PW + SD ++ K T K +A+++GRK +SI R
Sbjct: 9 LIVAMDKKRVIGKDNDIPWRISSDWEYVKNTT-------KGHAIILGRKNLQSIG---RA 58
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LP R N++LT +FN ++ EI SI A +L C + E+VF+ GG QI
Sbjct: 59 LPDRRNIILTRDKNFN---FKDCEIAHSIEAAFKL------CENEEEVFIFGGEQI 105
>sp|P0ABQ6|DYR_SHIFL Dihydrofolate reductase OS=Shigella flexneri GN=folA PE=3 SV=1
Length = 159
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 20/116 (17%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ A D IG + +PWNLP+DL +FK+ T++ V+MGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RP 53
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LPGR N++L S + + V +S+ A+ C + ++ VIGGG++
Sbjct: 54 LPGRKNIIL----SSQPGTDDRVTWVKSVDEAIAA------CGDVPEIMVIGGGRV 99
>sp|P0ABQ4|DYR_ECOLI Dihydrofolate reductase OS=Escherichia coli (strain K12) GN=folA
PE=1 SV=1
Length = 159
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 20/116 (17%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ A D IG + +PWNLP+DL +FK+ T++ V+MGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RP 53
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LPGR N++L S + + V +S+ A+ C + ++ VIGGG++
Sbjct: 54 LPGRKNIIL----SSQPGTDDRVTWVKSVDEAIAA------CGDVPEIMVIGGGRV 99
>sp|P0ABQ5|DYR_ECOL6 Dihydrofolate reductase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=folA PE=3 SV=1
Length = 159
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 20/116 (17%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ A D IG + +PWNLP+DL +FK+ T++ V+MGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RP 53
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LPGR N++L S + + V +S+ A+ C + ++ VIGGG++
Sbjct: 54 LPGRKNIIL----SSQPGTDDRVTWVKSVDEAIAA------CGDVPEIMVIGGGRV 99
>sp|Q27828|DRTS_PARTE Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Paramecium tetraurelia GN=GSPATT00019973001 PE=3 SV=1
Length = 462
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 71/126 (56%), Gaps = 18/126 (14%)
Query: 75 LRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWE 134
+ + + +V+A T + GIG +LPW L DL+ FK++T V+MGRKT+E
Sbjct: 1 MTTNKTFSMVLAMTLNGGIGYQNRLPWKLKEDLQRFKKITTG-------GIVIMGRKTFE 53
Query: 135 SISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIG 194
S++ +PLP R+NVV+ S N+ S V++ I AL+ Y +S +K+++IG
Sbjct: 54 SMNS--KPLPNRVNVVI----SKNMKSSNEVQVFPRIEDALQF-----YNTSHQKLYLIG 102
Query: 195 GGQILR 200
G +I
Sbjct: 103 GKRIFE 108
>sp|P31073|DYR_CITFR Dihydrofolate reductase OS=Citrobacter freundii GN=folA PE=3 SV=1
Length = 159
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 20/116 (17%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++ A D IG + +PWNLP+DL +FK+ T++ VVMGR TWESI RP
Sbjct: 4 LIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVVMGRHTWESIG---RP 53
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQI 198
LPGR N+V+ S + + V+ +S+ A+ + P ++ VIGGG++
Sbjct: 54 LPGRKNIVI----SSKPGTDDRVQWVKSVDEAIAACGDEP------EIMVIGGGRV 99
>sp|P36591|DYR_SCHPO Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dfr1 PE=2 SV=2
Length = 461
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 55 FYVGVNNNMSTLSNDNASMHLRARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLT 114
+ G+ + M + + H R +V ++ ++GIGK +PW++ ++ +F +T
Sbjct: 211 YKTGIRDFMFSAPTKEPTKHPRDLT--MIVAVSSPNLGIGKKNSMPWHIKQEMAYFANVT 268
Query: 115 MSTSDPGK--------RNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIASL---- 162
ST G+ N V+MGR ++S+ RPL R+N+V+T + ++N
Sbjct: 269 SSTESSGQLEEGKSKIMNVVIMGRSCYDSLPKKNRPLKDRINIVITRNSNYNFGLTKKEK 328
Query: 163 --ENVEICRSIHLALELLAEPPYCSS---IEKVFVIGG 195
EN+ I AL+L+AE S + KVF+IGG
Sbjct: 329 MPENLYAADCIDSALDLVAEKYGADSDIQVGKVFIIGG 366
>sp|P43791|DYR_HAEIN Dihydrofolate reductase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=folA PE=3 SV=1
Length = 160
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 20/120 (16%)
Query: 81 YQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLY 140
+ ++VA T + IGKD ++PW+LP+DL +F+Q T T P V+MGRKT+ESI
Sbjct: 3 FSLIVATTLNNVIGKDNQMPWHLPADLAWFRQNT--TGKP-----VIMGRKTFESIG--- 52
Query: 141 RPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 200
RPLP R N+VL+ + E V S A+ + +++ +IGGG++ +
Sbjct: 53 RPLPKRTNIVLSRQ----LFEHEGVIWKDSFESAVN------FVRDFDEIMLIGGGELFK 102
>sp|P00380|DYR_ENTFC Dihydrofolate reductase OS=Enterococcus faecium GN=folA PE=1 SV=1
Length = 167
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 93 IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLT 152
IGKDG LPW LP+D++FF++ TM +VMGRKT+E + L LP R +VLT
Sbjct: 14 IGKDGLLPWRLPNDMRFFREHTMD-------KILVMGRKTYEGMGKL--SLPYRHIIVLT 64
Query: 153 HSGSFNIASLENVEICRSIHLALELLAEPPYCSSI-EKVFVIGGGQILR 200
F + +N E+ SI ELLA Y I E ++V GG +I +
Sbjct: 65 TQKDFKVE--KNAEVLHSID---ELLA---YAKDIPEDIYVSGGSRIFQ 105
>sp|O62583|DYR_ENCCU Dihydrofolate reductase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=DHFR-1 PE=3 SV=1
Length = 205
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 19/127 (14%)
Query: 83 VVVAATHDMGIGKDGKLPWNLP--SDLKFFKQLTMSTS---------DPGKRNAVVMGRK 131
+VVA GIG LPW P +D+ +F+ L+ S P NAVVMGR+
Sbjct: 4 LVVALASHRGIGNANALPWPRPLAADMAWFRTLSQSIPLISPDRIALAPSASNAVVMGRR 63
Query: 132 TWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVF 191
TW+SI +RPL R+NVVL+ + S EN ++ AL+ L PP SS+ F
Sbjct: 64 TWDSIPSRFRPLANRINVVLSRGPA---RSTENTFFIQTFE-ALDSLPLPP--SSM--TF 115
Query: 192 VIGGGQI 198
VIGG +
Sbjct: 116 VIGGRDV 122
>sp|P0C0P1|DYR_STAES Dihydrofolate reductase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=folA PE=3 SV=1
Length = 161
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 22/113 (19%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++VA IG +LPW+LP+DLK KQLT N +VMGRKT+ SI +P
Sbjct: 5 IIVAHDKQRVIGYQNQLPWHLPNDLKHVKQLTTG-------NTLVMGRKTFNSIG---KP 54
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 195
LP R NVVLT+ SF+ E V++ S+ EL VF+ GG
Sbjct: 55 LPNRRNVVLTNQASFH---HEGVDVINSLDEIKELSGH---------VFIFGG 95
>sp|Q5HPB1|DYR_STAEQ Dihydrofolate reductase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=folA PE=3 SV=1
Length = 161
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 22/113 (19%)
Query: 83 VVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP 142
++VA IG +LPW+LP+DLK KQLT N +VMGRKT+ SI +P
Sbjct: 5 IIVAHDKQRVIGYQNQLPWHLPNDLKHVKQLTTG-------NTLVMGRKTFNSIG---KP 54
Query: 143 LPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGG 195
LP R NVVLT+ SF+ E V++ S+ EL VF+ GG
Sbjct: 55 LPNRRNVVLTNQASFH---HEGVDVINSLDEIKELSGH---------VFIFGG 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,243,461
Number of Sequences: 539616
Number of extensions: 2648931
Number of successful extensions: 7611
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 7417
Number of HSP's gapped (non-prelim): 100
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)