Query 029027
Match_columns 200
No_of_seqs 196 out of 1281
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 10:00:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qn1_B Protein phosphatase 2C 100.0 2.8E-43 9.6E-48 289.5 19.8 188 3-190 111-332 (337)
2 2iq1_A Protein phosphatase 2C 100.0 9.7E-43 3.3E-47 278.8 21.5 191 2-192 69-268 (274)
3 2p8e_A PPM1B beta isoform vari 100.0 2.9E-43 1E-47 286.1 18.7 184 3-189 103-301 (307)
4 3kdj_B Protein phosphatase 2C 100.0 5.6E-43 1.9E-47 285.5 18.9 189 3-194 98-313 (316)
5 1a6q_A Phosphatase 2C; catalyt 100.0 8.4E-42 2.9E-46 284.7 20.0 185 3-190 96-296 (382)
6 2i0o_A Ser/Thr phosphatase; be 100.0 9.4E-42 3.2E-46 276.9 17.9 183 2-186 86-304 (304)
7 4da1_A Protein phosphatase 1K, 100.0 2.9E-41 1E-45 282.3 20.3 191 2-192 183-382 (389)
8 3d8k_A PP2C, protein phosphata 100.0 6E-40 2E-44 273.0 20.4 182 4-190 81-328 (377)
9 2isn_A NYSGXRC-8828Z, phosphat 100.0 3.3E-39 1.1E-43 267.6 21.3 183 5-189 77-336 (364)
10 2j4o_A Mitogen-activated prote 100.0 1E-40 3.5E-45 279.9 10.6 189 3-191 101-371 (401)
11 2irm_A Mitogen-activated prote 100.0 2.2E-40 7.7E-45 274.3 12.4 181 3-187 89-357 (358)
12 2i44_A Serine-threonine phosph 100.0 2.4E-39 8.2E-44 264.8 17.9 183 3-187 108-322 (324)
13 2pnq_A [pyruvate dehydrogenase 100.0 1.5E-38 5.1E-43 270.7 11.7 185 3-187 160-456 (467)
14 2pk0_A Serine/threonine protei 100.0 1.5E-37 5.2E-42 245.2 13.5 174 3-188 74-248 (250)
15 2j82_A TPPHA, protein serine-t 100.0 1.4E-36 4.9E-41 238.2 16.5 171 2-185 66-240 (240)
16 1txo_A Putative bacterial enzy 100.0 2.1E-36 7.2E-41 236.9 14.9 170 3-186 65-236 (237)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 1.2E-35 4.3E-40 232.1 12.1 168 5-185 63-233 (234)
18 3rnr_A Stage II sporulation E 100.0 8.8E-36 3E-40 230.0 10.1 157 9-185 47-211 (211)
19 3t91_A Stage II sporulation pr 99.9 8.6E-21 3E-25 148.6 16.0 143 8-192 72-226 (242)
20 3pu9_A Protein serine/threonin 99.8 3.4E-19 1.2E-23 139.7 17.5 143 8-192 75-230 (242)
21 3f79_A Probable two-component 99.7 2.4E-17 8.1E-22 130.0 13.4 135 8-186 108-253 (255)
22 3zt9_A Serine phosphatase; hyd 99.7 1.4E-15 4.7E-20 115.3 14.8 126 9-184 66-193 (193)
23 3ke6_A Protein RV1364C/MT1410; 99.3 5.4E-10 1.9E-14 93.3 19.0 135 10-188 102-259 (399)
24 3eq2_A Probable two-component 98.7 1.6E-07 5.6E-12 77.8 12.6 133 9-187 248-393 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 81.8 0.015 5.3E-07 50.1 -7.9 77 100-185 43-134 (543)
26 1hq0_A CNF1, cytotoxic necroti 39.8 26 0.00089 27.3 3.5 24 28-52 143-166 (295)
27 1dgn_A Iceberg (protease inhib 37.0 56 0.0019 20.5 4.3 34 140-173 31-64 (89)
28 3q4f_C DNA repair protein XRCC 35.7 78 0.0027 22.9 5.2 68 115-182 40-117 (186)
29 2nz7_A NOD1, caspase recruitme 30.2 88 0.003 20.0 4.5 31 142-173 41-71 (98)
30 3mud_A DNA repair protein XRCC 29.3 1.2E+02 0.0042 21.7 5.4 54 129-182 33-91 (175)
31 2ww6_A Fibritin, T4 fibritin; 28.3 36 0.0012 16.3 1.6 17 51-67 9-25 (27)
32 4hcz_A PHD finger protein 1; p 27.9 28 0.00097 20.1 1.5 16 125-140 4-19 (58)
33 2m0o_A PHD finger protein 1; t 26.2 20 0.00068 22.1 0.7 18 123-140 25-42 (79)
34 4e9m_A Nucleotide-binding olig 25.8 1E+02 0.0036 21.3 4.3 31 142-173 55-85 (144)
35 2dhy_A CUE domain-containing p 24.3 1.2E+02 0.0041 18.0 5.0 37 140-176 29-66 (67)
36 3cqb_A Probable protease HTPX 21.2 21 0.00071 23.3 0.1 25 130-154 65-89 (107)
No 1
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=2.8e-43 Score=289.55 Aligned_cols=188 Identities=40% Similarity=0.565 Sum_probs=172.0
Q ss_pred cHHHHHHHHHHHHHHHHHhhh-------------cCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCC
Q 029027 3 DTKLAISETYQQTDVDFLESE-------------RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDH 69 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~-------------~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh 69 (200)
.++++|.++|..+|+.+.... ......||||++++++.++++|++||||||+|++|+|++.+||+||
T Consensus 111 ~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH 190 (337)
T 3qn1_B 111 QWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDH 190 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCC
T ss_pred HHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCEeeeecCCC
Confidence 577899999999999998654 2234579999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHhCCeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHH
Q 029027 70 KPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 149 (200)
Q Consensus 70 ~~~~~~e~~~i~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~ 149 (200)
++.++.|+.|+...+|.+......++++.+.+||+||+..+++.+.++|++..+.+.+.+|+||||||||||+++++++.
T Consensus 191 ~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~ 270 (337)
T 3qn1_B 191 KPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVC 270 (337)
T ss_dssp CTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHH
T ss_pred CCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHH
Confidence 99999999999999999998888899999999999999999999999999999998666699999999999999999999
Q ss_pred HHHHc---------------------CCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCCC
Q 029027 150 ALART---------------------GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNE 190 (200)
Q Consensus 150 ~i~~~---------------------~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~~ 190 (200)
++++. ..+++.+|+.|++.|+.+|+.||+|||||+|...+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~~~~ 332 (337)
T 3qn1_B 271 EIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRK 332 (337)
T ss_dssp HHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCSCC-
T ss_pred HHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecCCcc
Confidence 99975 346789999999999999999999999999987654
No 2
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.7e-43 Score=278.82 Aligned_cols=191 Identities=34% Similarity=0.545 Sum_probs=168.7
Q ss_pred ccHHHHHHHHHHHHHHHHHhhhc----CCCCCCCceEEEEEEEC-CEEEEEEecCccEEEEeCCceeeCCCCCCCCChhH
Q 029027 2 TDTKLAISETYQQTDVDFLESER----DTYRDDGSTASTAILVG-NHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDE 76 (200)
Q Consensus 2 ~~~~~~l~~a~~~~n~~i~~~~~----~~~~~~gtT~~~~~i~~-~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e 76 (200)
.+++++|.++|..+|+.+.+... .....+|||++++++.+ .+++++||||||+|++|+|++.+||+||++..+.|
T Consensus 69 ~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E 148 (274)
T 2iq1_A 69 KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDE 148 (274)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHH
Confidence 46789999999999999987732 24566999999999985 59999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEEeCC--ceeeeceeecccccCCcccccc-cccCCceeEEEeecC-ceEEEEEcCCCcCCCChHHHHHHH
Q 029027 77 RKRIENAGGVVMWAG--TWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEG-FELLVLASDGLWDVVPNEDAVALA 152 (200)
Q Consensus 77 ~~~i~~~~g~~~~~~--~~~~~~~~~~tr~lG~~~~~~~-~~~~p~~~~~~l~~~-~d~liL~SDGv~d~l~~~~i~~i~ 152 (200)
++|+.+.+|.+.... ..+.++.+.+||+||+..+|+. +.++|++..+++.++ +++||||||||||+++++++.+++
T Consensus 149 ~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~ 228 (274)
T 2iq1_A 149 KERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV 228 (274)
T ss_dssp HHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHH
T ss_pred HHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHH
Confidence 999999999998754 3466788899999999988875 678999999999985 469999999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCCCCC
Q 029027 153 RTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDP 192 (200)
Q Consensus 153 ~~~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~~~~ 192 (200)
....+++++|+.|++.|+++|+.||+|+||+++......|
T Consensus 229 ~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~~~~ 268 (274)
T 2iq1_A 229 NQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKEG 268 (274)
T ss_dssp HTSSSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC----
T ss_pred HHcCCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCCCC
Confidence 9888999999999999999999999999999998765544
No 3
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=286.10 Aligned_cols=184 Identities=34% Similarity=0.559 Sum_probs=162.0
Q ss_pred cHHHHHHHHHHHHHHHHHhhh--cCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHH
Q 029027 3 DTKLAISETYQQTDVDFLESE--RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRI 80 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~--~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i 80 (200)
++.++|.++|..+|+.|.+.. ......+|||++++++.++++|++||||||+|++|+|++.+||+||++.++.|++||
T Consensus 103 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~rI 182 (307)
T 2p8e_A 103 NVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERI 182 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHHHH
Confidence 467899999999999998763 234567999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEEeCCceeeeceeecccccCCccccc---------ccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHH
Q 029027 81 ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 151 (200)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~---------~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i 151 (200)
...||.+. ..|.++.+.+||+||+..+|. .+.++|++..+++.+++++||||||||||+++++++.++
T Consensus 183 ~~~gg~v~---~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~ 259 (307)
T 2p8e_A 183 QNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEY 259 (307)
T ss_dssp HHTTCCEE---TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred HHcCCEEE---eCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHH
Confidence 99999876 346677789999999988763 468899999999999856899999999999999999999
Q ss_pred HHc----CCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCC
Q 029027 152 ART----GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVN 189 (200)
Q Consensus 152 ~~~----~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~ 189 (200)
+.. ..+++++|+.|++.|+++|+.||+|+||+++...+
T Consensus 260 v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~ 301 (307)
T 2p8e_A 260 VKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG 301 (307)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence 976 57899999999999999999999999999997654
No 4
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=5.6e-43 Score=285.49 Aligned_cols=189 Identities=39% Similarity=0.585 Sum_probs=166.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhhcCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHHH
Q 029027 3 DTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIEN 82 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~~ 82 (200)
+++++|.++|..+|+.+.... ...+|||++++++.++++|++||||||+|++|+|++.+||+||++.++.|+.|+..
T Consensus 98 ~~~~~l~~a~~~~~~~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~~~~e~~ri~~ 174 (316)
T 3kdj_B 98 KWKKALFNSFLRVDSEIESVA---PETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEA 174 (316)
T ss_dssp HHHHHHHHHHHHHHHHGGGTS---CTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccc---CCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCCCCHHHHHHHHH
Confidence 467889999999998885432 34699999999999999999999999999999999999999999999999999999
Q ss_pred hCCeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHHHc--------
Q 029027 83 AGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART-------- 154 (200)
Q Consensus 83 ~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~-------- 154 (200)
.+|.+......|.++.+.+||+||+..+++.+.++|++..+.+.+.+|+||||||||||+++++++.++++.
T Consensus 175 ~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~ 254 (316)
T 3kdj_B 175 AGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKK 254 (316)
T ss_dssp TTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC
T ss_pred cCCeEEecCCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccc
Confidence 999998877889999999999999999999999999999998544459999999999999999999999875
Q ss_pred -------------------CCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCCCCCCC
Q 029027 155 -------------------GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAE 194 (200)
Q Consensus 155 -------------------~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~~~~~~ 194 (200)
..+++.+|+.|++.|+++|+.||+||||+++.+.+..+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~~~~~~~~ 313 (316)
T 3kdj_B 255 NAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKSK 313 (316)
T ss_dssp -----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSCC------
T ss_pred cccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCcccCC
Confidence 2357899999999999999999999999999987665543
No 5
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=8.4e-42 Score=284.66 Aligned_cols=185 Identities=35% Similarity=0.570 Sum_probs=166.8
Q ss_pred cHHHHHHHHHHHHHHHHHhhh--cCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHH
Q 029027 3 DTKLAISETYQQTDVDFLESE--RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRI 80 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~--~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i 80 (200)
++.++|.++|..+|+.|.... ......+|||++++++.++++|++||||||+|++|+|++.+||+||++.++.|++||
T Consensus 96 ~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI 175 (382)
T 1a6q_A 96 NVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI 175 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHH
Confidence 467899999999999998763 445567999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEEeCCceeeeceeecccccCCcccc---------cccccCCceeEEEee-cCceEEEEEcCCCcCCCChHHHHH
Q 029027 81 ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVD-EGFELLVLASDGLWDVVPNEDAVA 150 (200)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~~~~~~l~-~~~d~liL~SDGv~d~l~~~~i~~ 150 (200)
...||.+.. .|.++.+.+||+||+..+| +.+.++|++..+.+. +++++||||||||||+++++++.+
T Consensus 176 ~~~gg~v~~---~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~ 252 (382)
T 1a6q_A 176 QNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCD 252 (382)
T ss_dssp HHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHH
T ss_pred HhcCcEEec---ccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHH
Confidence 999998873 4677778999999998876 346789999999999 766899999999999999999999
Q ss_pred HHHc----CCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCCC
Q 029027 151 LART----GEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNE 190 (200)
Q Consensus 151 i~~~----~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~~ 190 (200)
++.. ..+++.+|+.|++.|+.+|+.||+||||+++...+.
T Consensus 253 ~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 296 (382)
T 1a6q_A 253 FVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPK 296 (382)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSCC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCCCC
Confidence 9976 578999999999999999999999999999976553
No 6
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=9.4e-42 Score=276.86 Aligned_cols=183 Identities=37% Similarity=0.597 Sum_probs=156.7
Q ss_pred ccHHHHHHHHHHHHHHHHHhhh----------------cCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeC
Q 029027 2 TDTKLAISETYQQTDVDFLESE----------------RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPL 65 (200)
Q Consensus 2 ~~~~~~l~~a~~~~n~~i~~~~----------------~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~l 65 (200)
.+++++|.++|..+|+.|.+.. ......+|||++++++.+++++++||||||+|++|+|++.+|
T Consensus 86 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~L 165 (304)
T 2i0o_A 86 KEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEM 165 (304)
T ss_dssp TCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEc
Confidence 4678899999999999887541 122567999999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHhCCeEEeCCceeeeceeecccccCCccccc---------ccccCCceeEEEeecCceEEEEEc
Q 029027 66 SEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------FVVAEPEIQDLEVDEGFELLVLAS 136 (200)
Q Consensus 66 t~dh~~~~~~e~~~i~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~---------~~~~~p~~~~~~l~~~~d~liL~S 136 (200)
|+||++.++.|++||...||.+... .|.++.+.+||+||+..+|. .+.++|++..+++.+++.||||||
T Consensus 166 T~DH~~~~~~e~~rI~~~gg~v~~~--~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~S 243 (304)
T 2i0o_A 166 SFDHKPEDTVEYQRIEKAGGRVTLD--GRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLAC 243 (304)
T ss_dssp CCCCCTTSHHHHHHHHHTTCCBCTT--SCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEEC
T ss_pred CCCcCCcCHHHHHHHHhCCCEEEeC--CeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEEC
Confidence 9999999999999999999988643 36677889999999988763 457899999999999855689999
Q ss_pred CCCcCCCChHHHHHHHHc-----CCCHHHHHHHHHHHHHh------cCCCCceEEEEEEcc
Q 029027 137 DGLWDVVPNEDAVALART-----GEEPEIAARKLTETAFT------RGSADNITCIVVRFH 186 (200)
Q Consensus 137 DGv~d~l~~~~i~~i~~~-----~~~~~~~a~~l~~~a~~------~g~~DN~T~ivi~~~ 186 (200)
|||||+++++++.+++.. ..+++++|+.|++.|++ +++.||+|+||++|.
T Consensus 244 DGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 244 DGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred cCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 999999999999999976 56899999999999986 458999999999874
No 7
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=2.9e-41 Score=282.29 Aligned_cols=191 Identities=35% Similarity=0.553 Sum_probs=169.1
Q ss_pred ccHHHHHHHHHHHHHHHHHhhhc----CCCCCCCceEEEEEEECC-EEEEEEecCccEEEEeCCceeeCCCCCCCCChhH
Q 029027 2 TDTKLAISETYQQTDVDFLESER----DTYRDDGSTASTAILVGN-HLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDE 76 (200)
Q Consensus 2 ~~~~~~l~~a~~~~n~~i~~~~~----~~~~~~gtT~~~~~i~~~-~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e 76 (200)
.+++++|.++|..+|+.+..... .....+|||++++++.++ +++++||||||+|++|+|++.+||+||++.++.|
T Consensus 183 ~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E 262 (389)
T 4da1_A 183 KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDE 262 (389)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHH
Confidence 46788999999999999987632 224568999999999866 9999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEEeC--CceeeeceeecccccCCcccccc-cccCCceeEEEeecC-ceEEEEEcCCCcCCCChHHHHHHH
Q 029027 77 RKRIENAGGVVMWA--GTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEG-FELLVLASDGLWDVVPNEDAVALA 152 (200)
Q Consensus 77 ~~~i~~~~g~~~~~--~~~~~~~~~~~tr~lG~~~~~~~-~~~~p~~~~~~l~~~-~d~liL~SDGv~d~l~~~~i~~i~ 152 (200)
++|+...||.+... ...++++.+.+||+||+..+|+. +.++|++..+.+..+ +++||||||||||+++++++.+++
T Consensus 263 ~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il 342 (389)
T 4da1_A 263 KERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV 342 (389)
T ss_dssp HHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHH
T ss_pred HHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHH
Confidence 99999999999864 34577788999999999988876 788999999999875 579999999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHhcCCCCceEEEEEEccCCCCCC
Q 029027 153 RTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDP 192 (200)
Q Consensus 153 ~~~~~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~~~~~~~ 192 (200)
....+++++|+.|++.|+++|+.||+||||+++..+...+
T Consensus 343 ~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~ 382 (389)
T 4da1_A 343 NQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKYK 382 (389)
T ss_dssp HHSSSHHHHHHHHHHHHHHHTCCSCEEEEEEEECCC----
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCCCC
Confidence 9888999999999999999999999999999998876644
No 8
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=6e-40 Score=272.96 Aligned_cols=182 Identities=27% Similarity=0.378 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCCceEEEEEEE-------------------------------------------
Q 029027 4 TKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV------------------------------------------- 40 (200)
Q Consensus 4 ~~~~l~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~------------------------------------------- 40 (200)
++++|.++|..+|+.|..... .+|||++++++.
T Consensus 81 ~~~al~~af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~ 156 (377)
T 3d8k_A 81 NEEEITRQFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFR 156 (377)
T ss_dssp SHHHHHHHHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGG
T ss_pred HHHHHHHHHHHHHHHHHhccc----CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecc
Confidence 468899999999999987743 489999998885
Q ss_pred --------CCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHHHhCCeEEe-CCceeeeceeecccccCCcccc
Q 029027 41 --------GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW-AGTWRVGGVLAMSRAFGNRMLK 111 (200)
Q Consensus 41 --------~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~~~~g~~~~-~~~~~~~~~~~~tr~lG~~~~~ 111 (200)
++++|++||||||+|++|+|++.+||+||++.++.|+.||...||.+.. .+..|.++.+.+||+||+..+|
T Consensus 157 ~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k 236 (377)
T 3d8k_A 157 RDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFK 236 (377)
T ss_dssp GCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGS
T ss_pred cccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecChhhh
Confidence 1489999999999999999999999999999999999999999999875 4445788889999999999887
Q ss_pred ---------cccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHH-HHc----CCCHHHHHHHHHHHHHhcCCCCc
Q 029027 112 ---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL-ART----GEEPEIAARKLTETAFTRGSADN 177 (200)
Q Consensus 112 ---------~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i-~~~----~~~~~~~a~~l~~~a~~~g~~DN 177 (200)
+.++++|++..+++.++ |+||||||||||+++++++.+. +.. ..+++.+|+.|++.|+.+|+.||
T Consensus 237 ~~~~~~~~~~~v~~~Pdv~~~~l~~~-D~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DN 315 (377)
T 3d8k_A 237 KGGQGKLQQDLVSAVPDVTTFFAYPG-DDIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRRKVTKN 315 (377)
T ss_dssp CC---CCSSCSSBCCCEEEEEEECTT-CEEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTSSCCSC
T ss_pred cccccccccCccccCCcEEEEEcCCC-CEEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhcCCCCC
Confidence 46788999999999998 8999999999999999998764 432 45789999999999999999999
Q ss_pred eEEEEEEccCCCC
Q 029027 178 ITCIVVRFHHVNE 190 (200)
Q Consensus 178 ~T~ivi~~~~~~~ 190 (200)
+|+||+++...+.
T Consensus 316 iTvivv~~~~~~~ 328 (377)
T 3d8k_A 316 ISTFVRHLPESRT 328 (377)
T ss_dssp CCEEEEECCSSCC
T ss_pred EEEEEEEecCCcc
Confidence 9999999987654
No 9
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-39 Score=267.55 Aligned_cols=183 Identities=32% Similarity=0.446 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCceEEEEEEEC-------------------------------------------
Q 029027 5 KLAISETYQQTDVDFLESERDTYRDDGSTASTAILVG------------------------------------------- 41 (200)
Q Consensus 5 ~~~l~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~~------------------------------------------- 41 (200)
.+.|.++|..+|+.|.+..... ..+|||++++++.+
T Consensus 77 ~~~l~~a~~~~d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 155 (364)
T 2isn_A 77 FAEVKKACLSLDAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVG 155 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CC
T ss_pred HHHHHHHHHHHHHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccc
Confidence 4678999999999998764332 56999999998852
Q ss_pred -----------------CEEEEEEecCccEEEE-eCCceeeCCCCCCCCChhHHHHHHHhCCeEEeCCceeeeceeeccc
Q 029027 42 -----------------NHLYVANVGDSRTVIS-KAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSR 103 (200)
Q Consensus 42 -----------------~~~~~~~vGDSr~y~~-r~g~~~~lt~dh~~~~~~e~~~i~~~~g~~~~~~~~~~~~~~~~tr 103 (200)
.++|++||||||+|++ |+|++.+||+||++.++.|++||...||.+......|.++.+.+||
T Consensus 156 ~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~ltR 235 (364)
T 2isn_A 156 RYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSR 235 (364)
T ss_dssp SSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSB
T ss_pred cccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeEE
Confidence 3899999999999999 7899999999999999999999999999998766667777788999
Q ss_pred ccCCcccc---------cccccCCceeEEEeecCceEEEEEcCCCcCCCC--hHHHHHHH-----HcCCCHHHHHHHHHH
Q 029027 104 AFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVP--NEDAVALA-----RTGEEPEIAARKLTE 167 (200)
Q Consensus 104 ~lG~~~~~---------~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~--~~~i~~i~-----~~~~~~~~~a~~l~~ 167 (200)
+||+..+| +.+.++|++..+.+.++ |+||||||||||+++ ++++.+++ ....+++++|+.|++
T Consensus 236 alGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~-D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~ 314 (364)
T 2isn_A 236 AFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSS-DLLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMD 314 (364)
T ss_dssp CEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTT-CEEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred EecchhhccccccCcccCceEEEeEEEEEECCCC-CEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 99998876 34678999999999998 799999999999976 66766544 345689999999999
Q ss_pred HHHhcCCCCceEEEEEEccCCC
Q 029027 168 TAFTRGSADNITCIVVRFHHVN 189 (200)
Q Consensus 168 ~a~~~g~~DN~T~ivi~~~~~~ 189 (200)
.|+++|+.||+|+||+++....
T Consensus 315 ~A~~~g~~DNiTvivv~~~~~~ 336 (364)
T 2isn_A 315 YAYDMNSQDNISVMLVAFHNQE 336 (364)
T ss_dssp HHHHTTCCSCEEEEEEEECSSC
T ss_pred HHHhcCCCCCEEEEEEEcCCCC
Confidence 9999999999999999997654
No 10
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=1e-40 Score=279.91 Aligned_cols=189 Identities=26% Similarity=0.369 Sum_probs=162.0
Q ss_pred cHHHHHHHHHHHHHHHHHhhhc------------------------------------CCCCCCCceEEEEEEECCEEEE
Q 029027 3 DTKLAISETYQQTDVDFLESER------------------------------------DTYRDDGSTASTAILVGNHLYV 46 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~~------------------------------------~~~~~~gtT~~~~~i~~~~~~~ 46 (200)
+++++|.++|..+|+.+++... .....+|||++++++.++++|+
T Consensus 101 ~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~v 180 (401)
T 2j4o_A 101 DVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV 180 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEE
Confidence 5788999999999998876310 0133689999999999999999
Q ss_pred EEecCccEEEEeCC----ceeeCCCCCCCCChhHHHHHHHhCCeEEeCCceeeeceeecccccCCcccc-----------
Q 029027 47 ANVGDSRTVISKAG----KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK----------- 111 (200)
Q Consensus 47 ~~vGDSr~y~~r~g----~~~~lt~dh~~~~~~e~~~i~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~----------- 111 (200)
+||||||+|++|++ ++.+||+||++.++.|++||...||.+......+.++.+.+||+||+..+|
T Consensus 181 anvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~ 260 (401)
T 2j4o_A 181 ANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSA 260 (401)
T ss_dssp EEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHSGGGSTTTTT
T ss_pred EEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhcccccccccccc
Confidence 99999999999988 999999999999999999999999986433344666777899999998766
Q ss_pred ---cccccCCceeE-EEeecCceEEEEEcCCCcCCC--------ChHHHHHHHHc----CCCHHHHHHHHHHHHHh----
Q 029027 112 ---QFVVAEPEIQD-LEVDEGFELLVLASDGLWDVV--------PNEDAVALART----GEEPEIAARKLTETAFT---- 171 (200)
Q Consensus 112 ---~~~~~~p~~~~-~~l~~~~d~liL~SDGv~d~l--------~~~~i~~i~~~----~~~~~~~a~~l~~~a~~---- 171 (200)
+.+.++|++.. +.+.++++|||||||||||++ +++++.+++.. ..+++.+|+.|++.|+.
T Consensus 261 ~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~ 340 (401)
T 2j4o_A 261 AKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSD 340 (401)
T ss_dssp CSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhh
Confidence 46788999996 999998679999999999999 89999999976 57899999999999975
Q ss_pred ---cCC--------CCceEEEEEEccCCCCC
Q 029027 172 ---RGS--------ADNITCIVVRFHHVNED 191 (200)
Q Consensus 172 ---~g~--------~DN~T~ivi~~~~~~~~ 191 (200)
+|+ .||+||||++|....+.
T Consensus 341 a~~~G~~~~~~~~~~DNiTvivv~~~~~~~~ 371 (401)
T 2j4o_A 341 TFASGGERARFCPRHEDMTLLVRNFGYPLGE 371 (401)
T ss_dssp HHHSCSSGGGGCSEECCEEEEEEEEBCCCC-
T ss_pred hhhcCCcccccCCCCCCeEEEEEEcCCCCcc
Confidence 665 89999999999865554
No 11
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-40 Score=274.29 Aligned_cols=181 Identities=24% Similarity=0.355 Sum_probs=157.5
Q ss_pred cHHHHHHHHHHHHHHHHHhhhc-------------------------------------CCCCCCCceEEEEEEECCEEE
Q 029027 3 DTKLAISETYQQTDVDFLESER-------------------------------------DTYRDDGSTASTAILVGNHLY 45 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~~-------------------------------------~~~~~~gtT~~~~~i~~~~~~ 45 (200)
+++++|.++|..+|+.|++... .....||||++++++.++++|
T Consensus 89 ~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~ 168 (358)
T 2irm_A 89 AVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLY 168 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEE
Confidence 5788999999999999976310 123469999999999999999
Q ss_pred EEEecCccEEEEeC---C--ceeeCCCCCCCCChhHHHHHHHhCCeEEeCCceeeeceeecccccCCccccc--------
Q 029027 46 VANVGDSRTVISKA---G--KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ-------- 112 (200)
Q Consensus 46 ~~~vGDSr~y~~r~---g--~~~~lt~dh~~~~~~e~~~i~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~-------- 112 (200)
++||||||+|++|+ | ++.+||+||++.++.|++||.+.||.+.. .|..+.+ +||+||+..+|.
T Consensus 169 vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~---~r~~g~l-lTRalGd~~~K~~~~~~~~~ 244 (358)
T 2irm_A 169 LGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN---FEGVPLY-STRCIGNYLGKAGYKDCNFL 244 (358)
T ss_dssp EEEESSCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG---GTTCTTC-BSBCEECHHHHTTGGGSSSS
T ss_pred EEEcccCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec---cCcCCEE-cccCCcCHHHhccccccccc
Confidence 99999999999998 8 99999999999999999999999998864 2344444 999999987663
Q ss_pred ------ccccCCceeE-EEeecCceEEEEEcCCCcCCCC----------hHHHHHHHHc----CCCHHHHHHHHHHHHHh
Q 029027 113 ------FVVAEPEIQD-LEVDEGFELLVLASDGLWDVVP----------NEDAVALART----GEEPEIAARKLTETAFT 171 (200)
Q Consensus 113 ------~~~~~p~~~~-~~l~~~~d~liL~SDGv~d~l~----------~~~i~~i~~~----~~~~~~~a~~l~~~a~~ 171 (200)
.+.++|++.. +.+.++++|||||||||||+++ ++++.+++.. ..+++.+|+.|++.|++
T Consensus 245 ~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~ 324 (358)
T 2irm_A 245 SSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQ 324 (358)
T ss_dssp TTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHH
T ss_pred cccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 5788999994 9999986789999999999999 8999999976 36899999999999976
Q ss_pred ---------------cC--CCCceEEEEEEccC
Q 029027 172 ---------------RG--SADNITCIVVRFHH 187 (200)
Q Consensus 172 ---------------~g--~~DN~T~ivi~~~~ 187 (200)
+| +.||+||||++|..
T Consensus 325 ~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 325 AHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred hhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence 47 89999999999864
No 12
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-39 Score=264.76 Aligned_cols=183 Identities=28% Similarity=0.458 Sum_probs=153.7
Q ss_pred cHHHHHHHHHHHHHHHHHhhhc---CCCCCCCceEEEEEEECCEEEEEEecCccEEEEeC---C-ceeeCCCCCCCCChh
Q 029027 3 DTKLAISETYQQTDVDFLESER---DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKA---G-KAIPLSEDHKPNRCD 75 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~~---~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~---g-~~~~lt~dh~~~~~~ 75 (200)
+++++|.++|..+|+.|.+... ....++|||+ +++.++++|++||||||+|++|+ | ++.+||+||++.++.
T Consensus 108 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~--~~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~ 185 (324)
T 2i44_A 108 LLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVT--AVLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTVDHKPDMPH 185 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEE--EEEETTEEEEEEESSCEEEEEEEETTEEEEEESCCCCCTTSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEE--EEEECCeEEEEEccCceEEEEeccCCCceEEECCCCCCCcCHH
Confidence 4578899999999999987732 2233445554 45899999999999999999997 7 899999999999999
Q ss_pred HHHHHHHhCCeEEeC-----CceeeeceeecccccCC----cccc----------cccccCCceeEEEeecCceEEEEEc
Q 029027 76 ERKRIENAGGVVMWA-----GTWRVGGVLAMSRAFGN----RMLK----------QFVVAEPEIQDLEVDEGFELLVLAS 136 (200)
Q Consensus 76 e~~~i~~~~g~~~~~-----~~~~~~~~~~~tr~lG~----~~~~----------~~~~~~p~~~~~~l~~~~d~liL~S 136 (200)
|++||.+.||.+... ...+..+.+.++|++|+ ..++ +.+.++|++..+++.+++++|||||
T Consensus 186 E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaS 265 (324)
T 2i44_A 186 EKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILAT 265 (324)
T ss_dssp HHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEEC
T ss_pred HHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEc
Confidence 999999999999532 22345677889999999 4433 2357899999999999844999999
Q ss_pred CCCcCCCChHHHHHHHHcC----CCHHH--HHHHHHHHHHhcCCCCceEEEEEEccC
Q 029027 137 DGLWDVVPNEDAVALARTG----EEPEI--AARKLTETAFTRGSADNITCIVVRFHH 187 (200)
Q Consensus 137 DGv~d~l~~~~i~~i~~~~----~~~~~--~a~~l~~~a~~~g~~DN~T~ivi~~~~ 187 (200)
|||||+++++++.+++... .++++ +|+.|++.|+++|+.||+|+||+++.+
T Consensus 266 DGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 266 DGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSADNITAMTVFFKK 322 (324)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEC-
T ss_pred CchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeeC
Confidence 9999999999999999763 68999 999999999999999999999999875
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=1.5e-38 Score=270.75 Aligned_cols=185 Identities=32% Similarity=0.428 Sum_probs=154.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhhc------------CCCCCCCceEEEEEEECCEEEEEEecCccEEEEe---CC--ceeeC
Q 029027 3 DTKLAISETYQQTDVDFLESER------------DTYRDDGSTASTAILVGNHLYVANVGDSRTVISK---AG--KAIPL 65 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~~------------~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r---~g--~~~~l 65 (200)
++.++|.++|..+|+.|..... .....||||++++++.++++|+|||||||+|++| +| .+.+|
T Consensus 160 ~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~L 239 (467)
T 2pnq_A 160 DVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTL 239 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEEC
Confidence 6889999999999999987632 1234599999999999999999999999999998 47 79999
Q ss_pred CCCCCCCChhHHHHHHHhCCeEEe---CCceeeeceeecccccCCcccc-------------------------------
Q 029027 66 SEDHKPNRCDERKRIENAGGVVMW---AGTWRVGGVLAMSRAFGNRMLK------------------------------- 111 (200)
Q Consensus 66 t~dh~~~~~~e~~~i~~~~g~~~~---~~~~~~~~~~~~tr~lG~~~~~------------------------------- 111 (200)
|+||++.++.|++||...|+.... -...|..+.+.+||+||+..+|
T Consensus 240 T~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 319 (467)
T 2pnq_A 240 SNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYH 319 (467)
T ss_dssp CCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCS
T ss_pred CCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhccccccccccccccccccccc
Confidence 999999999999999999864321 1234677788999999998765
Q ss_pred --cccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHHHcCC------CH-------------------------
Q 029027 112 --QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGE------EP------------------------- 158 (200)
Q Consensus 112 --~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~~~------~~------------------------- 158 (200)
++++++|++..+.+.+++.|||||||||||+|+++++.+++.... +|
T Consensus 320 ~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~ 399 (467)
T 2pnq_A 320 TPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMS 399 (467)
T ss_dssp SSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC--------------------------
T ss_pred CCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhccc
Confidence 347889999999999996688899999999999999999996521 23
Q ss_pred -----HHHHHHHHHHHHhcC-----------------------CCCceEEEEEEccC
Q 029027 159 -----EIAARKLTETAFTRG-----------------------SADNITCIVVRFHH 187 (200)
Q Consensus 159 -----~~~a~~l~~~a~~~g-----------------------~~DN~T~ivi~~~~ 187 (200)
+++|..|++.|+.+| ..||+|||||.|..
T Consensus 400 ~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 400 SVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp -----CCHHHHHHHHHHC-------------------------CCSCEEEEEEEECH
T ss_pred CCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence 567899999999875 38999999999863
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=1.5e-37 Score=245.20 Aligned_cols=174 Identities=24% Similarity=0.329 Sum_probs=150.2
Q ss_pred cHHHHHHHHHHHHHHHHHhhhc-CCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHH
Q 029027 3 DTKLAISETYQQTDVDFLESER-DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIE 81 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~~-~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~ 81 (200)
++.++|.++|..+|+.+..... .....+|||++++++.+++++++|+||||+|++|+|++.+||.||++.++ +.
T Consensus 74 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~-----~~ 148 (250)
T 2pk0_A 74 EIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNE-----LV 148 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH-----HH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHH-----HH
Confidence 4677899999999999988732 22566999999999999999999999999999999999999999998663 33
Q ss_pred HhCCeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHHHcCCCHHHH
Q 029027 82 NAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIA 161 (200)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~~~~~~~~ 161 (200)
+.| .+...+...+++.+.+||+||+.. ..+|++..+++.++ |+||||||||||+++++++.+++....+++++
T Consensus 149 ~~g-~i~~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~l~~g-d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~ 221 (250)
T 2pk0_A 149 KAG-QLTEEEAASHPQKNIITQSIGQAN-----PVEPDLGVHLLEEG-DYLVVNSDGLTNMLSNADIATVLTQEKTLDDK 221 (250)
T ss_dssp HTT-SSCHHHHHTCCSCCCBSCCBSCSS-----CCCCEEEEEECCTT-CEEEEECHHHHTTSCHHHHHHHHTSSSCHHHH
T ss_pred HcC-CCCHHHHHhCCCcceEEeecCCCC-----CccceEEEEEcCCC-CEEEEECCCCCCCcCHHHHHHHHhcCCCHHHH
Confidence 343 444433445567778999999965 57899999999998 89999999999999999999999887799999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEEccCC
Q 029027 162 ARKLTETAFTRGSADNITCIVVRFHHV 188 (200)
Q Consensus 162 a~~l~~~a~~~g~~DN~T~ivi~~~~~ 188 (200)
++.|++.|+.+|+.||+|+||+++.+.
T Consensus 222 a~~L~~~a~~~g~~DniTvivv~~~~~ 248 (250)
T 2pk0_A 222 NQDLITLANHRGGLDNITVALVYVESE 248 (250)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEEECC-
T ss_pred HHHHHHHHHHcCCCCCeEEEEEEeeCC
Confidence 999999999999999999999999753
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=1.4e-36 Score=238.15 Aligned_cols=171 Identities=23% Similarity=0.331 Sum_probs=140.8
Q ss_pred ccHHHHHHHHHHHHHHHHHhhhcC--CCCCCCceEEEEEEE--CCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHH
Q 029027 2 TDTKLAISETYQQTDVDFLESERD--TYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDER 77 (200)
Q Consensus 2 ~~~~~~l~~a~~~~n~~i~~~~~~--~~~~~gtT~~~~~i~--~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~ 77 (200)
.++.++|.++|+.+|+.+.+.... ...++|||++++++. +++++++|+||||+|++|+|++.+||.||++.++
T Consensus 66 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~--- 142 (240)
T 2j82_A 66 HDPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQ--- 142 (240)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHH---
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHH---
Confidence 467888999999999999887432 456689999999999 9999999999999999999999999999998663
Q ss_pred HHHHHhCCeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHHHcCCC
Q 029027 78 KRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEE 157 (200)
Q Consensus 78 ~~i~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~~~~ 157 (200)
+.+. |.+...+...+++.+.++|+||+.. ..+|++..+++.++ |+||||||||||+++++++.+++. ..+
T Consensus 143 --~~~~-g~i~~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~l~~g-d~lll~SDGl~d~l~~~~i~~~l~-~~~ 212 (240)
T 2j82_A 143 --AVQL-GSLTIEQARQHPWRHVLSQCLGRED-----LSQIDIQPIDLEPG-DRLLLCSDGLTEELTDDVISIYLS-EPN 212 (240)
T ss_dssp --C-----------------CCCBSCCBSCTT-----CCCCEEEEEECCTT-CEEEEECHHHHTTSCHHHHHHHHT-CSS
T ss_pred --HHHc-CCCCHHHHhcCCCcCeEeecCCCCC-----ceeEEEEEEeeCCC-CEEEEECCCCCCCCCHHHHHHHHc-cCC
Confidence 3333 3444444556677788999999964 57899999999998 899999999999999999999998 779
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEEc
Q 029027 158 PEIAARKLTETAFTRGSADNITCIVVRF 185 (200)
Q Consensus 158 ~~~~a~~l~~~a~~~g~~DN~T~ivi~~ 185 (200)
++++++.|++.|+.+|+.||+|+||+++
T Consensus 213 ~~~~a~~l~~~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 213 VQKAAAALVDAAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence 9999999999999999999999999975
No 16
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=2.1e-36 Score=236.89 Aligned_cols=170 Identities=22% Similarity=0.317 Sum_probs=145.5
Q ss_pred cHHHHHHHHHHHHHHHHHhhh--cCCCCCCCceEEEEEEECCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHH
Q 029027 3 DTKLAISETYQQTDVDFLESE--RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRI 80 (200)
Q Consensus 3 ~~~~~l~~a~~~~n~~i~~~~--~~~~~~~gtT~~~~~i~~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i 80 (200)
++.++|.++|..+|+.+.+.. .+....+|||++++++.+++++++|+||||+|++|+|++.+||+||++.+ ++
T Consensus 65 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~-----~~ 139 (237)
T 1txo_A 65 DLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQ-----TL 139 (237)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHH-----HH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHH-----HH
Confidence 678899999999999998762 33345689999999999999999999999999999999999999999765 34
Q ss_pred HHhCCeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHHHcCCCHHH
Q 029027 81 ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEI 160 (200)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~~~~~~~ 160 (200)
...| .+.......++....++|++|+. ..+|++..+++.++ |+||||||||||+++++++.++++. .++++
T Consensus 140 ~~~G-~i~~~~~~~~~~~~~~tr~lg~~------~~~p~~~~~~l~~~-d~lvl~SDGl~d~l~~~~i~~~~~~-~~~~~ 210 (237)
T 1txo_A 140 VDEG-RITPEEAHSHPQRSLIMRALTGH------EVEPTLTMREARAG-DRYLLCSDGLSDPVSDETILEALQI-PEVAE 210 (237)
T ss_dssp HHTT-SSCTTGGGGCTTTTCBCCCBSSS------CCCCEEEEEECCTT-CEEEEECHHHHTTSCHHHHHHHHTS-SSHHH
T ss_pred HHcC-CCCHHHHhhCccccceeeccCCC------CccceEEEEecCCC-CEEEEECCCCCCCCCHHHHHHHHhc-CCHHH
Confidence 4443 44444344445556789999974 46899999999998 8999999999999999999999975 48999
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEEcc
Q 029027 161 AARKLTETAFTRGSADNITCIVVRFH 186 (200)
Q Consensus 161 ~a~~l~~~a~~~g~~DN~T~ivi~~~ 186 (200)
+|+.|++.|+.+|+.||+|+||+++.
T Consensus 211 ~a~~L~~~a~~~g~~DniTvivv~~~ 236 (237)
T 1txo_A 211 SAHRLIELALRGGGPDNVTVVVADLE 236 (237)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCeEEEEEEee
Confidence 99999999999999999999999985
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=1.2e-35 Score=232.09 Aligned_cols=168 Identities=24% Similarity=0.352 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCceEEEEEEECCE---EEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHH
Q 029027 5 KLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNH---LYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIE 81 (200)
Q Consensus 5 ~~~l~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~~~~---~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~ 81 (200)
.+.|.++|..+|+.+.+........+|||++++++.+++ ++++|+||||+|++|+|++.++|+||++.+ ++.
T Consensus 63 ~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~-----~~~ 137 (234)
T 2jfr_A 63 RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAG-----ELV 137 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHH-----HHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHH-----HHH
Confidence 578899999999999887443222299999999999888 999999999999999999999999999865 344
Q ss_pred HhCCeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHHHcCCCHHHH
Q 029027 82 NAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIA 161 (200)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~~~~~~~~ 161 (200)
+.| .+...+...+++.+.+||+||+.. ..+|++..+++.++ |+||||||||||+++++++.+++ ...+++++
T Consensus 138 ~~g-~i~~~~~~~~~~~~~~tralG~~~-----~~~~~~~~~~l~~g-d~lll~SDGl~d~~~~~~i~~~~-~~~~~~~~ 209 (234)
T 2jfr_A 138 RMG-EITRHEARWHPQRHLLTRALGIGP-----HIGPDVFGIDCGPG-DRLLISSDGLFAAADEALIVDAA-TSPDPQVA 209 (234)
T ss_dssp HTT-SSCHHHHTTCTTTTCBSCCBSSSS-----CCCCEEEECCCCTT-CEEEEECGGGGTTSCHHHHHHHH-TCSSHHHH
T ss_pred HcC-CCCHHHHhcCcccceeeecCcCCC-----CceeEEEEEecCCC-CEEEEECCCCccccCHHHHHHHH-ccCCHHHH
Confidence 444 333333334556678999999964 57899999999998 89999999999999999999999 77799999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEEc
Q 029027 162 ARKLTETAFTRGSADNITCIVVRF 185 (200)
Q Consensus 162 a~~l~~~a~~~g~~DN~T~ivi~~ 185 (200)
++.|++.|+.+|+.||+|+|++++
T Consensus 210 a~~l~~~a~~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 210 VRRLVEVANDAGGSDNTTVVVIDL 233 (234)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCCeEEEEEEe
Confidence 999999999999999999999987
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=8.8e-36 Score=229.95 Aligned_cols=157 Identities=20% Similarity=0.227 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHhh--hcCCCCCCCceEEEEEEE--CCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHHHhC
Q 029027 9 SETYQQTDVDFLES--ERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAG 84 (200)
Q Consensus 9 ~~a~~~~n~~i~~~--~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~~~~ 84 (200)
.++++.+|+.|... ..+....||||++++++. +++++++|+||||+|++|+|++.+||+||++.+ ++...|
T Consensus 47 ~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~-----~~~~~g 121 (211)
T 3rnr_A 47 LDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSS-----EMVLLG 121 (211)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEEECCCCCBHHH-----HHHHTT
T ss_pred HHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEEEEEEccCeEEEEeCCEEEEECCCcHHHH-----HHHHcC
Confidence 57899999999887 445667799999999999 999999999999999999999999999999866 344554
Q ss_pred CeEEeCCceeeeceeecccccCCcccccccccCCce--eEEEeecCceEEEEEcCCCcCCCChHHHHHHHHcCCCHHHHH
Q 029027 85 GVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEI--QDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAA 162 (200)
Q Consensus 85 g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~--~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~~~~~~~~a 162 (200)
. .. ..++..+.++|+||... ..+|++ ..+++.++ |+|||||||||++++++++.+++....+ +
T Consensus 122 ~--~~---~~~~~~~~ltralG~~~-----~~~~~~~~~~~~l~~g-d~llL~SDGl~d~~~~~~i~~~l~~~~~----a 186 (211)
T 3rnr_A 122 R--GP---VPGPAGEMITSFIGIEN-----LTEISTSEAPLPLEAG-EGVLVVSDGVYRSLHEDRIAMALSRGSD----A 186 (211)
T ss_dssp S--CC---CCSHHHHCBSCCBTCSS-----CCCCEECSSCEECCTT-CEEEEEEC-----CCTTEEEEEECTTSC----H
T ss_pred C--Ch---hhCCCccEEecccCCCC-----CcceeEecceecCCCC-CEEEEEcCCCCCCcCHHHHHHHHhcCCh----H
Confidence 4 22 44555668999999865 457888 78999998 8999999999999999999998876544 8
Q ss_pred HHHHHHHHhcC--CCCceEEEEEEc
Q 029027 163 RKLTETAFTRG--SADNITCIVVRF 185 (200)
Q Consensus 163 ~~l~~~a~~~g--~~DN~T~ivi~~ 185 (200)
+.|++.|+++| +.||+|+||+++
T Consensus 187 ~~L~~~a~~~g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 187 RGILQEVEAQGRPYQDNATLALVIL 211 (211)
T ss_dssp HHHHHHHHHSCTTSCSSCEEEEEEC
T ss_pred HHHHHHHHHcCCCCCCceEEEEEeC
Confidence 89999999999 999999999985
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.86 E-value=8.6e-21 Score=148.59 Aligned_cols=143 Identities=17% Similarity=0.222 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCceEEEEEEE--CCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHHHhCC
Q 029027 8 ISETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG 85 (200)
Q Consensus 8 l~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~~~~g 85 (200)
+.+++..+|+.+.... ...+++|+++++++ +++++++|+||+|+|++|+|++.+++.++.+
T Consensus 72 ~~~~l~~~n~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-------------- 134 (242)
T 3t91_A 72 EKIAIKTINSILSLRT---TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP-------------- 134 (242)
T ss_dssp HHHHHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC-----------------
T ss_pred HHHHHHHHHHHHHhcC---CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce--------------
Confidence 4567778888876542 23588999999997 7899999999999999999999988654432
Q ss_pred eEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCC-----hHHHHHHHHc--CCCH
Q 029027 86 VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVP-----NEDAVALART--GEEP 158 (200)
Q Consensus 86 ~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~-----~~~i~~i~~~--~~~~ 158 (200)
+|... ...++...+.+.+| |.|+|||||||+.++ +..+.+++.. ..++
T Consensus 135 -------------------lG~~~-----~~~~~~~~~~l~~G-D~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~ 189 (242)
T 3t91_A 135 -------------------IGIIN-----EFDVEVVSEQLKAG-DLLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDP 189 (242)
T ss_dssp ---------------------CCC-----TTCEEEEEEECCTT-CEEEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCH
T ss_pred -------------------eEecC-----CCcceEEEEEeCCC-CEEEEECCCcccCCCcccchHHHHHHHHHHhcCCCH
Confidence 33321 23556778899998 899999999999998 5677788764 4689
Q ss_pred HHHHHHHHHHHHhcC-C--CCceEEEEEEccCCCCCC
Q 029027 159 EIAARKLTETAFTRG-S--ADNITCIVVRFHHVNEDP 192 (200)
Q Consensus 159 ~~~a~~l~~~a~~~g-~--~DN~T~ivi~~~~~~~~~ 192 (200)
+++++.|++.+...+ + .||+|++++++.+..+..
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~~~~~~ 226 (242)
T 3t91_A 190 QEIADLLMEEVIRTRSGQIEDDMTVVVVRIDHNTPKW 226 (242)
T ss_dssp HHHHHHHHHHHHHHTTSCCCSCEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCCCceEEEEEEEecCCCcc
Confidence 999999999998875 3 699999999998766543
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.83 E-value=3.4e-19 Score=139.72 Aligned_cols=143 Identities=15% Similarity=0.186 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCceEEEEEEE--CCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHHHhCC
Q 029027 8 ISETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG 85 (200)
Q Consensus 8 l~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~~~~g 85 (200)
+.+++..+|+.+..... ..+.+|+++++++ .++++++|+||+++|++|+|++.+++.++.+
T Consensus 75 ~~~~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-------------- 137 (242)
T 3pu9_A 75 DGAAARAAHDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR-------------- 137 (242)
T ss_dssp HHHHHHHHHHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC--------------
T ss_pred HHHHHHHHHHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc--------------
Confidence 45678889988865542 2478999999997 7799999999999999999999999887643
Q ss_pred eEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCC-------hHHHHHHHH-cCCC
Q 029027 86 VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVP-------NEDAVALAR-TGEE 157 (200)
Q Consensus 86 ~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~-------~~~i~~i~~-~~~~ 157 (200)
+|... ...++...+++.+| |.|+|||||+++..+ .+++..++. ...+
T Consensus 138 -------------------lG~~~-----~~~~~~~~~~l~~G-d~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~ 192 (242)
T 3pu9_A 138 -------------------IGIYR-----HTRPRVLEFPAEPG-LTVILVSDGIIGAGGRRGQPLEFLATGGRVAGPETP 192 (242)
T ss_dssp -------------------BSSCT-----TCCCEEEEEECCTT-CEEEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCC
T ss_pred -------------------ccccC-----CCCceEEEEEeCCC-CEEEEECcCcccCCCCccccccHHHHHHHHhccCCC
Confidence 34322 24567788999998 899999999998765 477766654 2468
Q ss_pred HHHHHHHHHHHHHhcC---CCCceEEEEEEccCCCCCC
Q 029027 158 PEIAARKLTETAFTRG---SADNITCIVVRFHHVNEDP 192 (200)
Q Consensus 158 ~~~~a~~l~~~a~~~g---~~DN~T~ivi~~~~~~~~~ 192 (200)
++++++.|++.+...+ ..||+|++++++.+..+..
T Consensus 193 ~~~~~~~l~~~~~~~~~~~~~DDiTvlvv~~~~~~~~~ 230 (242)
T 3pu9_A 193 AQAIADELLEAALVADDGRAGDDMTVVVLRLRNVEEVE 230 (242)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSSCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEEEEEEecCCCCC
Confidence 9999999999998875 5899999999997655443
No 21
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.74 E-value=2.4e-17 Score=129.97 Aligned_cols=135 Identities=20% Similarity=0.149 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCceEEEEEEE--CCEEEEEEecC-ccEEEEeCCceeeCCCCCCCCChhHHHHHHHhC
Q 029027 8 ISETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGD-SRTVISKAGKAIPLSEDHKPNRCDERKRIENAG 84 (200)
Q Consensus 8 l~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGD-Sr~y~~r~g~~~~lt~dh~~~~~~e~~~i~~~~ 84 (200)
+.+++..+|+.++.. ..++++|+++++++ .++++++|+|+ ++.|++++|++.+++.+|.+
T Consensus 108 p~~~l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~------------- 170 (255)
T 3f79_A 108 PSEVLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP------------- 170 (255)
T ss_dssp HHHHHHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC-----------------
T ss_pred HHHHHHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce-------------
Confidence 566788888888643 34689999999996 78999999999 56899999999999876643
Q ss_pred CeEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHH-------HHHHHHc-CC
Q 029027 85 GVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED-------AVALART-GE 156 (200)
Q Consensus 85 g~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~-------i~~i~~~-~~ 156 (200)
+|... ...++...+++.+| |.|+|||||+++.++.++ +.+++.. ..
T Consensus 171 --------------------lG~~~-----~~~~~~~~~~l~~g-d~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~~~ 224 (255)
T 3f79_A 171 --------------------VGLFD-----DATYDDRVMELPPS-FSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGG 224 (255)
T ss_dssp ---------------------CCSS-----CCCCCC---BCCSS-EEEEEECSCCCCCSCC---CCTTTSSHHHHHHHSC
T ss_pred --------------------EEEcC-----CCceEEEEEEECCC-CEEEEECCCcCcccCCCcchhhHHHHHHHHHhcCC
Confidence 33321 23456677889998 999999999999998777 8888865 44
Q ss_pred CHHHHHHHHHHHHHhcCCCCceEEEEEEcc
Q 029027 157 EPEIAARKLTETAFTRGSADNITCIVVRFH 186 (200)
Q Consensus 157 ~~~~~a~~l~~~a~~~g~~DN~T~ivi~~~ 186 (200)
+++++++.|. .+...+..||+|+++++..
T Consensus 225 ~~~~~~~~l~-~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 225 TLDGLRQVFG-LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp SSHHHHHHC------CCSSSCEEEEEEEEC
T ss_pred CHHHHHHHHH-hccCCCCCCCEEEEEEEec
Confidence 6788888776 5677788999999999864
No 22
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.68 E-value=1.4e-15 Score=115.26 Aligned_cols=126 Identities=20% Similarity=0.175 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCceEEEEEEE--CCEEEEEEecCccEEEEeCCceeeCCCCCCCCChhHHHHHHHhCCe
Q 029027 9 SETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGV 86 (200)
Q Consensus 9 ~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDSr~y~~r~g~~~~lt~dh~~~~~~e~~~i~~~~g~ 86 (200)
.+.+..+|+.+.. ..|+|++++.++ .+++.++|+|+++.|++|++++..+...+
T Consensus 66 ~~il~~ln~~l~~-------~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~----------------- 121 (193)
T 3zt9_A 66 VNIFQLCHRELRG-------TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATP----------------- 121 (193)
T ss_dssp HHHHHHHHHHHTT-------SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBC-----------------
T ss_pred HHHHHHHHHHHhc-------cCceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCC-----------------
Confidence 3455667776642 257888888888 77999999999999999998766553211
Q ss_pred EEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCChHHHHHHHHcCCCHHHHHHHHH
Q 029027 87 VMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLT 166 (200)
Q Consensus 87 ~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~~~i~~i~~~~~~~~~~a~~l~ 166 (200)
..+|... ...++...+++.+| |.|+|||||+++.++.+++..++ ..+|+++|+.|+
T Consensus 122 ----------------g~lG~~~-----~~~~~~~~~~l~~g-d~l~l~sDGl~e~~~~~~~~~~~--~~~~~~~a~~l~ 177 (193)
T 3zt9_A 122 ----------------GILGYNY-----PHQLLIAKGSYQEG-DLFLIHSDGIQEGAVPLALLANY--RLTAEELVRLIG 177 (193)
T ss_dssp ----------------CBBTTBC-----CSSCCCEEEECCTT-CEEEEECTTSCTTCSCGGGGGCT--TSCHHHHHHHHH
T ss_pred ----------------CceeccC-----CccceeEEeccCCC-CEEEEECCCCCCccChhhhhchh--cCCHHHHHHHHH
Confidence 1144321 12566778999998 89999999999999999887765 348999999999
Q ss_pred HHHHhcCCCCceEEEEEE
Q 029027 167 ETAFTRGSADNITCIVVR 184 (200)
Q Consensus 167 ~~a~~~g~~DN~T~ivi~ 184 (200)
+.+ .+..||+|++|++
T Consensus 178 ~~~--~~~~Dd~tvlv~r 193 (193)
T 3zt9_A 178 EKY--GRRDDDVAVIVAR 193 (193)
T ss_dssp HHH--CCTTSCEEEEEEC
T ss_pred HHh--CcCCCCeEEEEEC
Confidence 997 4589999999985
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.27 E-value=5.4e-10 Score=93.33 Aligned_cols=135 Identities=14% Similarity=0.211 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCceEEEEEEE--CCEEEEEEecCccEEEEe-CCceeeCCCCCCCCChhHHHHHHHhCCe
Q 029027 10 ETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGDSRTVISK-AGKAIPLSEDHKPNRCDERKRIENAGGV 86 (200)
Q Consensus 10 ~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDSr~y~~r-~g~~~~lt~dh~~~~~~e~~~i~~~~g~ 86 (200)
+.+..+|+ +... ....+++|+++++++ .+.+.++++|..+.|+++ +|++..+..++.+
T Consensus 102 ~il~~ln~-~~~~---~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~--------------- 162 (399)
T 3ke6_A 102 EALEAVDR-FHKQ---VPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG--------------- 162 (399)
T ss_dssp HHHHHHHH-HGGG---STTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC---------------
T ss_pred HHHHHHHH-HHHh---cCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc---------------
Confidence 45566666 3322 123478999999997 789999999999999998 6777777654421
Q ss_pred EEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCCh------HHHHHHHHcC--C--
Q 029027 87 VMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPN------EDAVALARTG--E-- 156 (200)
Q Consensus 87 ~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~------~~i~~i~~~~--~-- 156 (200)
.+|.. .......+.+.+| |.|+|+|||+.+.... +.+.+++... .
T Consensus 163 -----------------plG~~-------~~~~~~~~~l~~G-d~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~ 217 (399)
T 3ke6_A 163 -----------------PLGSG-------TGFPVRSEVLNIG-DAILFYTDGLIERPGRPLEASTAEFADLAASIASGSG 217 (399)
T ss_dssp -----------------CTTSS-------CCCCCEEEECCTT-CEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC---
T ss_pred -----------------ceECC-------CCceeEEEEECCC-CEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccc
Confidence 23431 1345567899998 8999999999998765 4566666541 1
Q ss_pred -----CHHHHHHHHHHHHHh-----cCCCCceEEEEEEccCC
Q 029027 157 -----EPEIAARKLTETAFT-----RGSADNITCIVVRFHHV 188 (200)
Q Consensus 157 -----~~~~~a~~l~~~a~~-----~g~~DN~T~ivi~~~~~ 188 (200)
++...++.|++.+++ .+..||+|++++++...
T Consensus 218 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~~ 259 (399)
T 3ke6_A 218 GFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRAP 259 (399)
T ss_dssp -------CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECCC
T ss_pred cccccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeCC
Confidence 344445555555543 35789999999999864
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.72 E-value=1.6e-07 Score=77.84 Aligned_cols=133 Identities=20% Similarity=0.142 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCceEEEEEEE--CCEEEEEEecCcc-EEEEeCCceeeCCCCCCCCChhHHHHHHHhCC
Q 029027 9 SETYQQTDVDFLESERDTYRDDGSTASTAILV--GNHLYVANVGDSR-TVISKAGKAIPLSEDHKPNRCDERKRIENAGG 85 (200)
Q Consensus 9 ~~a~~~~n~~i~~~~~~~~~~~gtT~~~~~i~--~~~~~~~~vGDSr-~y~~r~g~~~~lt~dh~~~~~~e~~~i~~~~g 85 (200)
.+.+..+|+.+... ...+..|+++++++ .+.+.+++.|-.. .++.++|++..+.....+
T Consensus 248 ~~~l~~ln~~l~~~----~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~p-------------- 309 (394)
T 3eq2_A 248 SEVLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP-------------- 309 (394)
T ss_dssp HHHHHHHHHHHHHT----TCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--C--------------
T ss_pred HHHHHHHHHHHhcc----CcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCce--------------
Confidence 45667788887642 23467999999987 7899999999754 777888888777533221
Q ss_pred eEEeCCceeeeceeecccccCCcccccccccCCceeEEEeecCceEEEEEcCCCcCCCCh-------HHHHHHHHcCCCH
Q 029027 86 VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPN-------EDAVALARTGEEP 158 (200)
Q Consensus 86 ~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~~d~liL~SDGv~d~l~~-------~~i~~i~~~~~~~ 158 (200)
||... .......++.+.+| |.|+|+|||+.+.... +.+.+++.....
T Consensus 310 -------------------lG~~~-----~~~~~~~~~~l~~g-d~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~~~- 363 (394)
T 3eq2_A 310 -------------------VGLFD-----DATYDDRVMELPPS-FSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGG- 363 (394)
T ss_dssp -------------------CSCCC-----CC--CCEEEECCSS-CEEEECSSCCCC-----CCSTTTTTSHHHHHTTC--
T ss_pred -------------------eEecC-----CCceEEEEEEeCCC-CEEEEECCCcccccCcccchhhHHHHHHHHHhcch-
Confidence 34321 22344567899998 8999999999997443 456666665322
Q ss_pred HHHHHHHHHHHHhc---CCCCceEEEEEEccC
Q 029027 159 EIAARKLTETAFTR---GSADNITCIVVRFHH 187 (200)
Q Consensus 159 ~~~a~~l~~~a~~~---g~~DN~T~ivi~~~~ 187 (200)
..+.|.+..... ...|++|+++++...
T Consensus 364 --~~~~l~~~~~~~~~~~~~DDit~l~i~~~~ 393 (394)
T 3eq2_A 364 --TLDGLRQVFGLANLAEMPDDIALLVLSRNL 393 (394)
T ss_dssp ---CHHHHHHHSCCCSCC--CCCEEEEEC---
T ss_pred --hHHHHHHHhcccCCCCCCCceEEEEEeccc
Confidence 133344433332 247999999998653
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=81.80 E-value=0.015 Score=50.12 Aligned_cols=77 Identities=10% Similarity=0.040 Sum_probs=59.9
Q ss_pred ecccccCCcccccccccCCceeEEEeec--Cce----EEEEEcCCCcCCCChHHHHHHHHc-----CCCHHHHHHHHHHH
Q 029027 100 AMSRAFGNRMLKQFVVAEPEIQDLEVDE--GFE----LLVLASDGLWDVVPNEDAVALART-----GEEPEIAARKLTET 168 (200)
Q Consensus 100 ~~tr~lG~~~~~~~~~~~p~~~~~~l~~--~~d----~liL~SDGv~d~l~~~~i~~i~~~-----~~~~~~~a~~l~~~ 168 (200)
.++||+|... ..+.++..+.+.. | + .+++++ |+.+...++.+++.+ ..+.+..++.|++.
T Consensus 43 ~l~~~~~l~~-----~~~~d~~~~~~~~~ig-~~~~~~f~~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~ 113 (543)
T 3c4z_A 43 PLSKCEALRE-----SLDLGFEGMCLEQPIG-KRLFQQFLRTH---EQHGPALQLWKDIEDYDTADDALRPQKAQALRAA 113 (543)
T ss_dssp CGGGGHHHHH-----HSCCCHHHHHTSSHHH-HHHHHHHHHHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHH
T ss_pred CchHHHHHHh-----ccccCHHHhhccCccc-HHHHHHHHhcC---CchhHHHHHHhhhhhhccCchhhHHHHHHHHHHH
Confidence 3788988765 5677888888877 7 6 555666 888888777776655 24778899999999
Q ss_pred HHhcCCCCceEEE----EEEc
Q 029027 169 AFTRGSADNITCI----VVRF 185 (200)
Q Consensus 169 a~~~g~~DN~T~i----vi~~ 185 (200)
++++++.||++++ +.++
T Consensus 114 ~~~~~~~d~~~~~~~~~v~~v 134 (543)
T 3c4z_A 114 YLEPQAQLFCSFLDAETVARA 134 (543)
T ss_dssp HTSTTCTTCCTTSCHHHHHHH
T ss_pred hhCchhhhhhccCCHHHHhhh
Confidence 9999999999998 6555
No 26
>1hq0_A CNF1, cytotoxic necrotizing factor 1; beta sandwich, RHO deamidase, RHO transglutaminase, toxin; 1.83A {Escherichia coli} SCOP: d.194.1.1 PDB: 1hzg_A
Probab=39.84 E-value=26 Score=27.35 Aligned_cols=24 Identities=21% Similarity=0.266 Sum_probs=19.7
Q ss_pred CCCCceEEEEEEECCEEEEEEecCc
Q 029027 28 RDDGSTASTAILVGNHLYVANVGDS 52 (200)
Q Consensus 28 ~~~gtT~~~~~i~~~~~~~~~vGDS 52 (200)
.-+|||++.+ +.++.+|..|+|-+
T Consensus 143 ~LSGCT~v~A-~K~~~ly~~HtGk~ 166 (295)
T 1hq0_A 143 NLSGCTTIVA-RKEGYIYKVHTGTT 166 (295)
T ss_dssp CBSSCEEEEE-EETTEEEEEEEEES
T ss_pred cccCcEEEEE-EcCCeEEEEEcCCC
Confidence 3478888776 68999999999976
No 27
>1dgn_A Iceberg (protease inhibitor); antiparallel six-helix bundle, greek-KEY, hydrolase inhibitor; NMR {Homo sapiens} SCOP: a.77.1.3
Probab=37.02 E-value=56 Score=20.48 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=27.2
Q ss_pred cCCCChHHHHHHHHcCCCHHHHHHHHHHHHHhcC
Q 029027 140 WDVVPNEDAVALARTGEEPEIAARKLTETAFTRG 173 (200)
Q Consensus 140 ~d~l~~~~i~~i~~~~~~~~~~a~~l~~~a~~~g 173 (200)
+++++.+|...+-......+..|+.|++....+|
T Consensus 31 ~~VLn~~E~e~i~~~~~t~~dkar~LiD~V~~KG 64 (89)
T 1dgn_A 31 DEVISQEDMNKVRDENDTVMDKARVLIDLVTGKG 64 (89)
T ss_dssp HTCSCHHHHHHHHTCCSSHHHHHHHHHHHHHHTC
T ss_pred HCcccHHHHHHHHhccCchHHHHHHHHHHHHHHh
Confidence 3567888888887766677899999999888765
No 28
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=35.67 E-value=78 Score=22.89 Aligned_cols=68 Identities=22% Similarity=0.335 Sum_probs=42.2
Q ss_pred ccCCcee---EEEeecC--ceEEEEEcCCC--cC-CCChHHHHHHHHc-CCCHHHHHHHHHHHHHh-cCCCCceEEEE
Q 029027 115 VAEPEIQ---DLEVDEG--FELLVLASDGL--WD-VVPNEDAVALART-GEEPEIAARKLTETAFT-RGSADNITCIV 182 (200)
Q Consensus 115 ~~~p~~~---~~~l~~~--~d~liL~SDGv--~d-~l~~~~i~~i~~~-~~~~~~~a~~l~~~a~~-~g~~DN~T~iv 182 (200)
..+|++. .+.+.++ +.|.|+-|||- |. .+++.+|.+.... ....+.-.+.|.+.-.. .+..+|++.-+
T Consensus 40 ~sep~~~yfLqvsW~~~lgsGF~i~LTDGqSaW~G~VS~~~Is~eAd~m~Me~e~YV~eL~KALv~~~~~~~~y~F~~ 117 (186)
T 3q4f_C 40 VSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELRKALLSGAGPADVYTFNF 117 (186)
T ss_dssp TTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHTTCCHHHHHHHHHHHHSSCCCSSCCEEEEE
T ss_pred cCCCCccEEEEEEeccCCCcceEEEEeCCcceeeeEECHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCCCCcceEEEe
Confidence 3455543 3344443 56899999995 43 6789999998876 55667777766544323 33455665543
No 29
>2nz7_A NOD1, caspase recruitment domain-containing protein 4, CARD4; helix swapped, disulfide bond, apoptosis; 1.90A {Homo sapiens} PDB: 2nsn_A
Probab=30.25 E-value=88 Score=20.03 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=24.8
Q ss_pred CCChHHHHHHHHcCCCHHHHHHHHHHHHHhcC
Q 029027 142 VVPNEDAVALARTGEEPEIAARKLTETAFTRG 173 (200)
Q Consensus 142 ~l~~~~i~~i~~~~~~~~~~a~~l~~~a~~~g 173 (200)
++++++ .++......+..-+..|++.+..+|
T Consensus 41 VL~~ee-~~I~~~~~T~~~kaR~Lld~v~~KG 71 (98)
T 2nz7_A 41 YFSAED-AEIVCACPTQPDKVRKILDLVQSKG 71 (98)
T ss_dssp SSCHHH-HHHHHTCCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHH-HHHHccCCCcHHHHHHHHHHHHHHh
Confidence 468888 7777666788999999999887776
No 30
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=29.27 E-value=1.2e+02 Score=21.72 Aligned_cols=54 Identities=20% Similarity=0.277 Sum_probs=38.4
Q ss_pred ceEEEEEcCCC--cC-CCChHHHHHHHHc-CCCHHHHHHHHHHHHHhc-CCCCceEEEE
Q 029027 129 FELLVLASDGL--WD-VVPNEDAVALART-GEEPEIAARKLTETAFTR-GSADNITCIV 182 (200)
Q Consensus 129 ~d~liL~SDGv--~d-~l~~~~i~~i~~~-~~~~~~~a~~l~~~a~~~-g~~DN~T~iv 182 (200)
+.|.|+-|||- |. .+++.+|...... ....+.-.+.|.+.-... +..+|++.-+
T Consensus 33 ~gf~i~ltDG~saW~g~Vs~~~i~~eA~~~~me~e~Yv~el~kAl~~~~~~~~~~~f~~ 91 (175)
T 3mud_A 33 SGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELRKALLSGAGPADVYTFNF 91 (175)
T ss_dssp GEEEEEEECSSCEEEEEEEHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCTTCCEEEEE
T ss_pred cceEEEEeCCcceeeeeeCHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCCCCcceEEec
Confidence 46899999995 33 6789999988876 556777777765544243 5667777765
No 31
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=28.30 E-value=36 Score=16.30 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=13.2
Q ss_pred CccEEEEeCCceeeCCC
Q 029027 51 DSRTVISKAGKAIPLSE 67 (200)
Q Consensus 51 DSr~y~~r~g~~~~lt~ 67 (200)
|-.+|+.++|.++.++.
T Consensus 9 Dg~~Yvr~dg~WV~l~t 25 (27)
T 2ww6_A 9 DAQAYVRKFGEWVLLST 25 (27)
T ss_dssp SSCEEEEETTEEEEGGG
T ss_pred CcceeEEEcCeEEEccc
Confidence 66788889998887753
No 32
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=27.91 E-value=28 Score=20.15 Aligned_cols=16 Identities=38% Similarity=0.482 Sum_probs=12.8
Q ss_pred eecCceEEEEEcCCCc
Q 029027 125 VDEGFELLVLASDGLW 140 (200)
Q Consensus 125 l~~~~d~liL~SDGv~ 140 (200)
+..|.|+|+-+|||.+
T Consensus 4 f~~GedVLarwsDG~f 19 (58)
T 4hcz_A 4 LWEGQDVLARWTDGLL 19 (58)
T ss_dssp CCTTCEEEEECTTSCE
T ss_pred cccCCEEEEEecCCCE
Confidence 3456789988999987
No 33
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=26.23 E-value=20 Score=22.07 Aligned_cols=18 Identities=33% Similarity=0.394 Sum_probs=14.6
Q ss_pred EEeecCceEEEEEcCCCc
Q 029027 123 LEVDEGFELLVLASDGLW 140 (200)
Q Consensus 123 ~~l~~~~d~liL~SDGv~ 140 (200)
..+..|+|+|+-+|||++
T Consensus 25 ~~f~eGeDVLarwsDGlf 42 (79)
T 2m0o_A 25 PRLWEGQDVLARWTDGLL 42 (79)
T ss_dssp CCCCTTCEEEBCCTTSCC
T ss_pred ceeccCCEEEEEecCCCE
Confidence 456677789988999997
No 34
>4e9m_A Nucleotide-binding oligomerization domain-contain protein 1; innate immunity, RIPK2, protein binding; HET: FLC; 2.15A {Homo sapiens} PDB: 2b1w_A 2dbd_A
Probab=25.85 E-value=1e+02 Score=21.31 Aligned_cols=31 Identities=19% Similarity=0.247 Sum_probs=24.4
Q ss_pred CCChHHHHHHHHcCCCHHHHHHHHHHHHHhcC
Q 029027 142 VVPNEDAVALARTGEEPEIAARKLTETAFTRG 173 (200)
Q Consensus 142 ~l~~~~i~~i~~~~~~~~~~a~~l~~~a~~~g 173 (200)
+++.+|. +++....+++..++.|++.+..+|
T Consensus 55 vLs~EE~-EiV~~~~T~~dKaRrLLDlV~sKG 85 (144)
T 4e9m_A 55 YFSAEDA-EIVCACPTQPDKVRKILDLVQSKG 85 (144)
T ss_dssp SSCHHHH-HHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHH-HHHhccCChHHHHHHHHHHHHHhh
Confidence 5688888 666667788999999999887765
No 35
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.27 E-value=1.2e+02 Score=18.00 Aligned_cols=37 Identities=8% Similarity=0.158 Sum_probs=28.9
Q ss_pred cCCCChHHHHHHHHc-CCCHHHHHHHHHHHHHhcCCCC
Q 029027 140 WDVVPNEDAVALART-GEEPEIAARKLTETAFTRGSAD 176 (200)
Q Consensus 140 ~d~l~~~~i~~i~~~-~~~~~~~a~~l~~~a~~~g~~D 176 (200)
|-.++.+.|..++.. ..+.+.+.+.|++.....+..|
T Consensus 29 FP~lD~~vI~~vL~a~~G~vd~aId~LL~ms~~~~~~~ 66 (67)
T 2dhy_A 29 FPNMDYDIIECVLRANSGAVDATIDQLLQMNLESGPSS 66 (67)
T ss_dssp CSSSCHHHHHHHHHHHTSCHHHHHHHHHHHHHCSSCCC
T ss_pred CCCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCCCCCCC
Confidence 456788889888865 6688889999999887776554
No 36
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.19 E-value=21 Score=23.27 Aligned_cols=25 Identities=28% Similarity=0.364 Sum_probs=20.9
Q ss_pred eEEEEEcCCCcCCCChHHHHHHHHc
Q 029027 130 ELLVLASDGLWDVVPNEDAVALART 154 (200)
Q Consensus 130 d~liL~SDGv~d~l~~~~i~~i~~~ 154 (200)
..+|+.|.|+.+.++++|+..++..
T Consensus 65 ~~~i~v~~gLl~~l~~~El~aVlaH 89 (107)
T 3cqb_A 65 DSLVAVSTGLLHNMTRDEAEAVLAH 89 (107)
T ss_dssp CCEEEEEHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEEcHHHHhhCCHHHHHHHHHH
Confidence 3567889999999999999998853
Done!