BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029028
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03943|IM30_PEA Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum
GN=IM30 PE=2 SV=1
Length = 323
Score = 260 bits (664), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/200 (69%), Positives = 156/200 (78%), Gaps = 17/200 (8%)
Query: 1 MAAKSQIVTGFTMPMTPAPSSSSSSSSSSLCMVKKPLTTSFFNG-GVGALKVTRLRIAPS 59
M K QI +G +P P SSS ++KKPL T+ F V LK +RIA
Sbjct: 1 MTTKFQIFSG--LPSAPLQPSSS--------LLKKPLATTLFGTRPVDTLKFRVMRIAKP 50
Query: 60 SRSHCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMR 119
R GGGA+ RMNLFDR ARVVKSYANA++S+FEDPEKILEQAVLEMNDDL KMR
Sbjct: 51 VR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMR 104
Query: 120 QATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANAL 179
QATAQVLASQKRLENK KAA+QASE+WYRKAQLALQKGEEDLAREALKRRKS+ADNA++L
Sbjct: 105 QATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSL 164
Query: 180 KAQLDQQKNVVNNLVSNTRV 199
KAQLDQQK+VV+NLVSNTR+
Sbjct: 165 KAQLDQQKSVVDNLVSNTRL 184
>sp|O80796|VIPP1_ARATH Membrane-associated protein VIPP1, chloroplastic OS=Arabidopsis
thaliana GN=VIPP1 PE=1 SV=1
Length = 330
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 157/200 (78%), Gaps = 6/200 (3%)
Query: 1 MAAKSQIVTGFTMPMTPAPSSSSSSSSSSLCMVKK-PLTTSFFNGGVGALKVTRLRIAPS 59
MA K+ VTG P+ P SSS S+SS+ C ++ PL TSFF GAL+V LR+A
Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACD 60
Query: 60 SRSHCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMR 119
+R C G GA MNLF+R +RVVKSYANA++SSFEDPEKILEQ V+EMN DL KMR
Sbjct: 61 NRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMR 115
Query: 120 QATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANAL 179
QATAQVLASQK+L+NK KAA+Q+S+DWY++AQLAL KG+EDLAREALKRRKS+ADNA AL
Sbjct: 116 QATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATAL 175
Query: 180 KAQLDQQKNVVNNLVSNTRV 199
K QLDQQK VV+NLVSNTR+
Sbjct: 176 KTQLDQQKGVVDNLVSNTRL 195
>sp|Q8S0J7|IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1
Length = 317
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 146/188 (77%), Gaps = 15/188 (7%)
Query: 12 TMPMTPAPSSSSSSSSSSLCMVKKPLTTSFFNGGVGALKVTRLRIAPSSRSHCYRQGGGA 71
++ + P P +S+S + L TSF NG V +L++ ++R + +R C
Sbjct: 9 SLRLAPPPPASAS-------FRRTALRTSFLNGSV-SLRLIQVRQSNVNRFKCN------ 54
Query: 72 LNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKR 131
R NL DR +RVVKSYANA+LSSFEDPEKIL+QAVLEMNDDL KMRQATAQVLASQKR
Sbjct: 55 -GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKR 113
Query: 132 LENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVN 191
LENK KAAEQAS+DWYR+AQLALQKG+EDLAREALKRRKSYADNA++LKAQLDQQK VV
Sbjct: 114 LENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVE 173
Query: 192 NLVSNTRV 199
NLVSNTRV
Sbjct: 174 NLVSNTRV 181
>sp|Q55707|Y617_SYNY3 Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0617 PE=3 SV=1
Length = 267
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 84/121 (69%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M LFDRL RVV++ N ++S EDPEK+LEQAV++M +DLV++RQA A+ +A +KR E +
Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQR 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
Q ++ W +A+LAL GEE+LAREAL R+KS D A A + QL QQ+ + NL
Sbjct: 61 LNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRR 120
Query: 196 N 196
N
Sbjct: 121 N 121
>sp|Q9RUB7|PSPA_DEIRA Phage shock protein A homolog OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=DR_1473 PE=1
SV=1
Length = 223
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 73/124 (58%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M++FDRL+R++++ N ++S EDP KI++QA+ +M R A +A +LE +
Sbjct: 1 MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLERE 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS 195
+ + ++ +KA+ AL+ G EDLAREAL+R +++ D A Q Q++ V+ L +
Sbjct: 61 AGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKT 120
Query: 196 NTRV 199
R
Sbjct: 121 QLRA 124
>sp|P0AFM8|PSPA_SHIFL Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2
Length = 222
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L +
Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQL 183
+ A +W KA+LAL K EDLAR AL ++ D +L+ ++
Sbjct: 61 IEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEV 108
>sp|P0AFM6|PSPA_ECOLI Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1
SV=2
Length = 222
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L +
Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQL 183
+ A +W KA+LAL K EDLAR AL ++ D +L+ ++
Sbjct: 61 IEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEV 108
>sp|P0AFM7|PSPA_ECO57 Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2
Length = 222
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENK 135
M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L +
Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR 60
Query: 136 CKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQL 183
+ A +W KA+LAL K EDLAR AL ++ D +L+ ++
Sbjct: 61 IEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEV 108
>sp|P54617|PSPA_BACSU Phage shock protein A homolog OS=Bacillus subtilis (strain 168)
GN=ydjF PE=1 SV=3
Length = 227
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 76 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQ---KRL 132
M++ R ++ + NA+L E+PEK+++Q + MN DL K++ TA V+A + KR
Sbjct: 1 MSIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKRE 60
Query: 133 ENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKS 171
++C+A + E + K ALQ G E AR+ L+R+ S
Sbjct: 61 YHECQADMEKMESYAMK---ALQAGNESDARKFLERKTS 96
>sp|Q9K8A0|MUTS2_BACHD MutS2 protein OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=mutS2 PE=3 SV=1
Length = 785
Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 87 KSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDW 146
+S A AI EKI+EQA +++D ++ A + SQK E+ + AE+A ++
Sbjct: 488 RSNAFAISKRLGLEEKIIEQAKAHIDEDASQVESMIASLEQSQKSAESDWEEAEKALQE- 546
Query: 147 YRKAQLALQKGEEDLARE 164
+ +L LQK +DL +E
Sbjct: 547 AEQLRLDLQKKLDDLEKE 564
>sp|O32201|LIAH_BACSU Protein LiaH OS=Bacillus subtilis (strain 168) GN=liaH PE=2 SV=1
Length = 225
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 94 LSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLA 153
L E+P+ +L Q V +M D+ K +Q + + + K + A + + +AQLA
Sbjct: 18 LDKMENPKVMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLA 77
Query: 154 LQKGEEDLAREALKRRKSYADNANALKAQLDQ 185
GEE+LA++AL K A KA +Q
Sbjct: 78 FDAGEEELAKKALTEMKYLEGKAAEHKASYEQ 109
>sp|Q9PTG8|TACC3_XENLA Transforming acidic coiled-coil-containing protein 3 OS=Xenopus
laevis GN=tacc3 PE=1 SV=2
Length = 931
Score = 35.0 bits (79), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 81 RLARVVKSYANAILSSFEDPEKILEQAVLEMND----------DLVKMRQATAQVLASQK 130
+ +++ + I ED ++ E A LE+N DL M + +++ K
Sbjct: 764 EMGKIIAEFEGTITQILEDSQRQKETAKLELNKVLQEKQQVQVDLNSMETSFSELF---K 820
Query: 131 RLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVV 190
RLE + +A E YRK + AL+K ED K + Y ALKA +++ N
Sbjct: 821 RLEKQKEALE-----GYRKNEEALKKCVEDYLVRIKKEEQRY----QALKAHAEEKLNRA 871
Query: 191 NNLVSNTR 198
N +++ R
Sbjct: 872 NEEIAHVR 879
>sp|Q8NM84|GCH1_CORGL GTP cyclohydrolase 1 OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=folE PE=3 SV=1
Length = 196
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 75 RMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQ 120
R L + ARV ++Y EDP +LE+ E +++LV +R+
Sbjct: 32 REGLLETPARVARAYKETFAGLHEDPTTVLEKTFSEGHEELVLVRE 77
>sp|A4QH94|GCH1_CORGB GTP cyclohydrolase 1 OS=Corynebacterium glutamicum (strain R)
GN=folE PE=3 SV=1
Length = 196
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 75 RMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQ 120
R L + ARV ++Y EDP +LE+ E +++LV +R+
Sbjct: 32 REGLLETPARVARAYKETFAGLHEDPTTVLEKTFSEGHEELVLVRE 77
>sp|Q91ZU6|DYST_MOUSE Dystonin OS=Mus musculus GN=Dst PE=1 SV=1
Length = 7389
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 33 VKKPLTTSFFNGGVGALKVTRLRIAPSSRSHCYRQGGGALN---TRMNLFDRLAR----V 85
+K P N GV + I+P+ + GG LN T N D LA
Sbjct: 4349 LKAPEIHKASNSGVSLCNLLSALISPAKAIAAAKSGGVILNGEGTDTNTQDFLANKGLTS 4408
Query: 86 VKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAA 139
+K I S+ED +L+ ++E+N L K+++A + A + LE K A
Sbjct: 4409 IKKDMTDISHSYEDLGLLLKDKIVELNTKLSKLQKAQEESSAMMQWLEKMNKTA 4462
>sp|Q8K983|DPO3X_BUCAP DNA polymerase III subunit gamma OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=dnaX PE=3 SV=1
Length = 363
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 20/125 (16%)
Query: 75 RMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLEN 134
++ L D + + + NA+L + E+P + +K AT V K + +
Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPQ------------HIKFILATTDVEKIPKTIRS 168
Query: 135 KC---KAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYA-----DNANALKAQLDQQ 186
+C K + ED + + L+KG + EALK YA D N L+ +
Sbjct: 169 RCLHFKLNILSEEDIFNFLKHILKKGGNNFDEEALKIISDYANGSMRDALNLLEHAMHLS 228
Query: 187 KNVVN 191
KN +N
Sbjct: 229 KNNIN 233
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 52 TRLRIAPSSRSHCYRQGGGALNTRMNLFDRLARVVKSYANAILSSF 97
T + APS RS + GGA L+DRL + +KSY + +L+ F
Sbjct: 54 TSVSAAPSGRSSG--KTGGAQLVGKKLYDRLEQFLKSYLSELLTKF 97
>sp|Q9Y6A2|CP46A_HUMAN Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP46A1 PE=1 SV=1
Length = 500
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 101 EKILEQAVLEMNDDLVKMRQATAQVLASQKR----LENKCKAAEQASEDWYRKAQLALQK 156
+K L QAV M + + R A+ L +++ + + Q DW ++ + AL++
Sbjct: 208 QKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKR 267
Query: 157 GEE---DLAREALKRRKSYADNANAL 179
GEE D+ + LK + D+ L
Sbjct: 268 GEEVPADILTQILKAEEGAQDDEGLL 293
>sp|Q9PQF2|DNAK_UREPA Chaperone protein DnaK OS=Ureaplasma parvum serovar 3 (strain ATCC
700970) GN=dnaK PE=3 SV=1
Length = 603
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 36 PLTTSFFN-GGVGALKVTRLRIAPSSRSHCYRQGGG---ALNTRMNLFDR-LARVVKSYA 90
PLT S GGV + R P S+S + +++ R+ +R LA K
Sbjct: 369 PLTLSIETMGGVATPLIPRNTKIPVSKSQIFSTAADNQPSVDIRIVQGERSLAADNKLLG 428
Query: 91 NAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKA 150
N LS E + + Q ++ N D + A+ L +QK K ++ S+D K
Sbjct: 429 NFELSGIEPAPRGVPQIEIKFNIDANGIMSVNAKDLKTQKETSITIKDSQGLSQDEIDK- 487
Query: 151 QLALQKGEEDLAREA-LKRRKSYADNANALKAQLDQ 185
+++ EE+ ++A +K + + A++L QL+Q
Sbjct: 488 --MIKEAEENKEKDAKVKHERELVNRADSLINQLEQ 521
>sp|B1AIX8|DNAK_UREP2 Chaperone protein DnaK OS=Ureaplasma parvum serovar 3 (strain ATCC
27815 / 27 / NCTC 11736) GN=dnaK PE=3 SV=1
Length = 603
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 36 PLTTSFFN-GGVGALKVTRLRIAPSSRSHCYRQGGG---ALNTRMNLFDR-LARVVKSYA 90
PLT S GGV + R P S+S + +++ R+ +R LA K
Sbjct: 369 PLTLSIETMGGVATPLIPRNTKIPVSKSQIFSTAADNQPSVDIRIVQGERSLAADNKLLG 428
Query: 91 NAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKA 150
N LS E + + Q ++ N D + A+ L +QK K ++ S+D K
Sbjct: 429 NFELSGIEPAPRGVPQIEIKFNIDANGIMSVNAKDLKTQKETSITIKDSQGLSQDEIDK- 487
Query: 151 QLALQKGEEDLAREA-LKRRKSYADNANALKAQLDQ 185
+++ EE+ ++A +K + + A++L QL+Q
Sbjct: 488 --MIKEAEENKEKDAKVKHERELVNRADSLINQLEQ 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.123 0.331
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,227,121
Number of Sequences: 539616
Number of extensions: 2187952
Number of successful extensions: 11569
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 11465
Number of HSP's gapped (non-prelim): 267
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)