BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029029
(200 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/200 (96%), Positives = 196/200 (98%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDI+NQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADLLDARKVTAEEAQ YAQE GLFF+ETSAKTATNVNDIFYEIAKRLPRVQPAPNP
Sbjct: 121 AGNKADLLDARKVTAEEAQVYAQEYGLFFIETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
SGMVLMDRP E TASASCCS
Sbjct: 181 SGMVLMDRPTESTASASCCS 200
>gi|118482090|gb|ABK92976.1| unknown [Populus trichocarpa]
Length = 200
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/200 (94%), Positives = 195/200 (97%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MATT NKNINAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATTANKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDI+NQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADLLDARKV AEEAQ +AQENGLFFMETSAKTATNVNDIFYEIAKRL +VQPAPNP
Sbjct: 121 AGNKADLLDARKVAAEEAQVFAQENGLFFMETSAKTATNVNDIFYEIAKRLSQVQPAPNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
SGMV+MDRP ERTASA+CCS
Sbjct: 181 SGMVIMDRPTERTASAACCS 200
>gi|224134314|ref|XP_002321789.1| predicted protein [Populus trichocarpa]
gi|222868785|gb|EEF05916.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/200 (93%), Positives = 193/200 (96%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MATT NKNINAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATTANKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDI+NQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADLLDARKV AE Q +AQENGLFFMETSAKTATNVNDIFYEIAKRL +VQPAPNP
Sbjct: 121 AGNKADLLDARKVAAEATQVFAQENGLFFMETSAKTATNVNDIFYEIAKRLSQVQPAPNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
SGMV+MDRP ERTASA+CCS
Sbjct: 181 SGMVIMDRPTERTASAACCS 200
>gi|296878|emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 200
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/200 (91%), Positives = 192/200 (96%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT+GNKN+NAKLVLLGDVGAGKSSL+LRFVKGQFIEFQESTIGAAFFSQT+AVNDATVK
Sbjct: 1 MATSGNKNMNAKLVLLGDVGAGKSSLLLRFVKGQFIEFQESTIGAAFFSQTVAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSL PMYYRGAAAAIIV+DITNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLPPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADLLDARKV AEEAQ YAQENGLFFMETSAKTA+NVNDIFYEIA RLPR+QPA NP
Sbjct: 121 AGNKADLLDARKVAAEEAQTYAQENGLFFMETSAKTASNVNDIFYEIANRLPRLQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
SGMVLMDRP + ASASCCS
Sbjct: 181 SGMVLMDRPAQTPASASCCS 200
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/200 (90%), Positives = 189/200 (94%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT+GNKNINAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ SF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+DLLD+RKV AE+AQ YAQENGLFFMETSAK+A NVNDIFYEIAKRLPRVQP N
Sbjct: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL DRP ER AS SCCS
Sbjct: 181 TGMVL-DRPAERVASTSCCS 199
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/200 (89%), Positives = 189/200 (94%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT GNK+INAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+DLLDARKVTAEEAQ YAQENGLFFMETSAKTATNV +IFYEIA+RLPRVQP NP
Sbjct: 121 AGNKSDLLDARKVTAEEAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL DR +R S+SCC+
Sbjct: 181 TGMVLPDRAMDRAVSSSCCA 200
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/200 (89%), Positives = 189/200 (94%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA++GNKNINAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADLLDARKV+AEEA+ YAQEN LFFMETSAKTATNV DIFYEIAKRLPRVQPA NP
Sbjct: 121 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL + PG S+SCC+
Sbjct: 181 TGMVLPNGPGATAVSSSCCA 200
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/200 (88%), Positives = 188/200 (94%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK+INAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+DLLDARKVTAE+AQ YAQENGLFFMETSAKTATNV +IFYEIA+RLPRVQP NP
Sbjct: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL DR +R S+SCC+
Sbjct: 181 TGMVLPDRAMDRAVSSSCCA 200
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 175/200 (87%), Positives = 186/200 (93%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA+NVNDIFYEIAKRLPR QPA NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E T +ASCCS
Sbjct: 181 AGMVLVDRPAEGTRAASCCS 200
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/200 (85%), Positives = 185/200 (92%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+DL D RKVTAEEA+ YA+ENGLFFMETSAK+A NVND+FYEIAKRLPR QPA NP
Sbjct: 121 AGNKSDLEDKRKVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E + +ASCCS
Sbjct: 181 AGMVLVDRPAEGSRAASCCS 200
>gi|363807594|ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
gi|255642884|gb|ACU22609.1| unknown [Glycine max]
Length = 200
Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 173/200 (86%), Positives = 184/200 (92%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKS LVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSGLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA+NVNDIFYEIAKRLPR QPA NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP T +ASCCS
Sbjct: 181 AGMVLVDRPAGGTRAASCCS 200
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 172/200 (86%), Positives = 183/200 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFF ETSAKTA NVND FYEIAKRLPR QPA NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E + +ASCCS
Sbjct: 181 AGMVLVDRPAESSQAASCCS 200
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 361 bits (926), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 172/200 (86%), Positives = 184/200 (92%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHTNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN SF RAKKWVQELQ QGNPNMV+A
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAF 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFF+ETSAKTA NVNDIFYEIAK+LPR QPA NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E T +ASCCS
Sbjct: 181 AGMVLVDRPAEGTRAASCCS 200
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/200 (85%), Positives = 183/200 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA NVND+F+EIAKRLPR QP NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E +ASCCS
Sbjct: 181 AGMVLVDRPAEGARAASCCS 200
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/200 (85%), Positives = 184/200 (92%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
GNK+DL D RKVTAEEA+ YA+ENGLFFMETSAK+A NVND+FYEIAKRLPR QPA NP
Sbjct: 121 TGNKSDLEDKRKVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E + +ASCCS
Sbjct: 181 AGMVLVDRPTEGSRAASCCS 200
>gi|1370178|emb|CAA98166.1| RAB5A [Lotus japonicus]
gi|388504250|gb|AFK40191.1| unknown [Lotus japonicus]
Length = 200
Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/200 (84%), Positives = 183/200 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMA
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAF 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+DL D RKVTA+EA+ YA+ENGLFFMETSAKTA NVND+FYEIAKRLPR QPA NP
Sbjct: 121 AGNKSDLEDKRKVTADEARVYAEENGLFFMETSAKTAANVNDVFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E ++SCCS
Sbjct: 181 AGMVLVDRPAEGARASSCCS 200
>gi|388515701|gb|AFK45912.1| unknown [Medicago truncatula]
Length = 200
Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 169/200 (84%), Positives = 184/200 (92%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AG+K+DL D R VTAEEA+ YA+ENGLFFMETSAK+A NVND+FYEIAKRLPR QPA NP
Sbjct: 121 AGSKSDLEDKRDVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E + +ASCCS
Sbjct: 181 AGMVLVDRPAEGSRAASCCS 200
>gi|12311682|emb|CAC24476.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 170/200 (85%), Positives = 182/200 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAK VLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA NVND+F+EIAKRLPR QP NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E +ASCCS
Sbjct: 181 AGMVLVDRPAEGARAASCCS 200
>gi|6010033|emb|CAB57220.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 170/200 (85%), Positives = 182/200 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVL FVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLLFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA NVND+F+EIAKRLPR QP NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E +ASCCS
Sbjct: 181 AGMVLVDRPAEGARAASCCS 200
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 169/200 (84%), Positives = 181/200 (90%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTL VNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLVVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVT EEA+ YA+ENGLFFMETSAKTA NVND+F+EIAKRLPR QP NP
Sbjct: 121 AGNKADLEDKRKVTVEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E +ASCCS
Sbjct: 181 AGMVLVDRPAEGARAASCCS 200
>gi|449518960|ref|XP_004166503.1| PREDICTED: ras-related protein RABF2b-like, partial [Cucumis
sativus]
Length = 186
Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 169/187 (90%), Positives = 176/187 (94%), Gaps = 1/187 (0%)
Query: 14 VLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 73
VLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH
Sbjct: 1 VLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 60
Query: 74 SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKV 133
SLAPMYYRGAAAAIIVYDITNQ SF+RAKKWVQELQAQGNPNMVMALAGNK+DLLD+RKV
Sbjct: 61 SLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSRKV 120
Query: 134 TAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERT 193
AE+AQ YAQENGLFFMETSAK+A NVNDIFYEIAKRLPRVQP N +GMVL DRP ER
Sbjct: 121 AAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTTGMVL-DRPAERV 179
Query: 194 ASASCCS 200
AS SCCS
Sbjct: 180 ASTSCCS 186
>gi|388491226|gb|AFK33679.1| unknown [Lotus japonicus]
Length = 200
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/200 (83%), Positives = 182/200 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+G GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATVGHNNLNAKLVLLGDMGTGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMV+AL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVVAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+DL D RKVT EEA+ YA++NGLFFM TSAKTA NVND+FYEIAKRLPR QPA NP
Sbjct: 121 AGNKSDLEDKRKVTPEEARVYAEDNGLFFMGTSAKTAANVNDVFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E + +ASCCS
Sbjct: 181 AGMVLVDRPAEGSRAASCCS 200
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 351 bits (901), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 166/196 (84%), Positives = 179/196 (91%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
G+ N+NAK VLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVKFEIW
Sbjct: 1 GHNNLNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMALAGNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL D R+VTAEEA+ YA+ENGLFFMETSAKTA NVND+F+EIAKRLPR QP NP+GMV
Sbjct: 121 ADLEDKREVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMV 180
Query: 185 LMDRPGERTASASCCS 200
L+DRP E +ASCCS
Sbjct: 181 LVDRPAEGARAASCCS 196
>gi|12311678|emb|CAC24474.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/196 (84%), Positives = 178/196 (90%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
G+ N+NAK VLLGD+GAGKSSLVLRFVKGQF+EFQ STIGAAFFSQTLAVNDATVKFEIW
Sbjct: 1 GHNNLNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQVSTIGAAFFSQTLAVNDATVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMALAGNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL D RKVTAEEA+ YA+ENGLFFMETSAKTA NVND+F+EIAKRLPR QP NP+GMV
Sbjct: 121 ADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNPAGMV 180
Query: 185 LMDRPGERTASASCCS 200
L+DRP E +ASCCS
Sbjct: 181 LVDRPAEGARAASCCS 196
>gi|400977|sp|P31583.1|RHN1_NICPL RecName: Full=Ras-related protein RHN1
gi|19691|emb|CAA46112.1| small GTP binding protein [Nicotiana plumbaginifolia]
Length = 200
Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 166/200 (83%), Positives = 181/200 (90%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA++ + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS TLAVN+ATVK
Sbjct: 1 MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA NVN IFYEIAKRLPR QPA NP
Sbjct: 121 AGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DR E T + SCC+
Sbjct: 181 AGMVLVDRAAEGTRATSCCT 200
>gi|266879|sp|P29687.1|RAB5_TOBAC RecName: Full=Ras-related protein Rab5
gi|19986|emb|CAA45352.1| Nt-rab5 [Nicotiana tabacum]
Length = 200
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/200 (82%), Positives = 182/200 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA+ + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS T++VN+ATVK
Sbjct: 1 MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ S RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTATNVNDIFYEIAKRLPR QPA NP
Sbjct: 121 AGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPRAQPAQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL D+P + + +ASCC+
Sbjct: 181 AGMVLEDKPAQGSQAASCCT 200
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/191 (86%), Positives = 177/191 (92%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHTNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN SF RAKKWVQELQ QGNPNMV+A
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAF 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFF+ETSAKTA NVNDIFYEIAK+LPR QPA NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNP 180
Query: 181 SGMVLMDRPGE 191
+GMVL+DRP E
Sbjct: 181 AGMVLVDRPAE 191
>gi|255626087|gb|ACU13388.1| unknown [Glycine max]
Length = 204
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/191 (86%), Positives = 176/191 (92%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D RKVTAEEA+ YA+ENGLFFMETSAKTA+NVNDIFYEIAK R QPA NP
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKSYQRAQPAQNP 180
Query: 181 SGMVLMDRPGE 191
+GMVL+DRP E
Sbjct: 181 AGMVLVDRPAE 191
>gi|255639786|gb|ACU20186.1| unknown [Glycine max]
Length = 233
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/233 (74%), Positives = 185/233 (79%), Gaps = 33/233 (14%)
Query: 1 MATTGNKNINAKLV---------------------------------LLGDVGAGKSSLV 27
MAT G+ N+NAKLV LLGD+GAGKSSLV
Sbjct: 1 MATIGHNNLNAKLVGPSSLFSISFCFFFLSQSFSIPMMFSPCSFHQVLLGDMGAGKSSLV 60
Query: 28 LRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAI 87
LRFVKGQF+EFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAI
Sbjct: 61 LRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAI 120
Query: 88 IVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL 147
IVY IT+ SF RAKKWVQELQ QGNPNMVMALAGNKADL D RKVTAEEA+ YA+ENGL
Sbjct: 121 IVYGITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEARVYAEENGL 180
Query: 148 FFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCCS 200
FFMETSAKTA+NVNDIFYEIAKRLPR QPA NP+GMVL+DRP E T +ASCCS
Sbjct: 181 FFMETSAKTASNVNDIFYEIAKRLPRAQPAQNPAGMVLVDRPAEGTRAASCCS 233
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/179 (91%), Positives = 172/179 (96%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK+INAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 3 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 62
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 63 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 122
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
AGNK+DLLDARKVTAE+AQ YAQENGLFFMETSAKTATNV +IFYEIA+RLPRVQP N
Sbjct: 123 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 181
>gi|357119478|ref|XP_003561466.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 203
Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/201 (84%), Positives = 181/201 (90%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAK+VLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAV+D TVKF
Sbjct: 3 ANAGNKIRNAKVVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVSDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDI+NQASF RAKKWVQELQAQGNPN V+ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDISNQASFIRAKKWVQELQAQGNPNTVVALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNKADLL+ R+V EEA+ YAQENGLFFMETSAKTATNVNDIFYEIAKRL + QPA NP
Sbjct: 123 GNKADLLETRQVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQGQPAQNPQ 182
Query: 181 SGMVLMDRPGER-TASASCCS 200
+GMVL RP ER +SASCCS
Sbjct: 183 AGMVLSQRPNERVVSSASCCS 203
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/201 (84%), Positives = 182/201 (90%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN N ++ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNKAD+LDAR+V AEEA+AYAQENGLFFMETSAKTA NVNDIFYEIAK+L + Q AP+P
Sbjct: 123 GNKADMLDARQVPAEEAKAYAQENGLFFMETSAKTAINVNDIFYEIAKKLLQGQQAPSPQ 182
Query: 181 SGMVLMDRPGERT-ASASCCS 200
+GMVL RP ERT +S+SCCS
Sbjct: 183 AGMVLNQRPNERTVSSSSCCS 203
>gi|242038603|ref|XP_002466696.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
gi|241920550|gb|EER93694.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
Length = 203
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/201 (83%), Positives = 181/201 (90%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN ++ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNKAD+LDAR+V AEEA+ YAQENGLFFMETSAK+A NVNDIFYEIAKRL + Q AP+P
Sbjct: 123 GNKADMLDARQVPAEEAKTYAQENGLFFMETSAKSAINVNDIFYEIAKRLLQGQQAPSPQ 182
Query: 181 SGMVLMDRPGER-TASASCCS 200
+GMVL RP ER +S+SCCS
Sbjct: 183 AGMVLNQRPNERMVSSSSCCS 203
>gi|116782322|gb|ABK22463.1| unknown [Picea sitchensis]
gi|116793226|gb|ABK26663.1| unknown [Picea sitchensis]
gi|224284237|gb|ACN39854.1| unknown [Picea sitchensis]
Length = 200
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 158/200 (79%), Positives = 177/200 (88%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT GNKN+ AKLVLLGD+GAGKSSLVLRFVKGQF +QESTIGAAFFSQTLAVN+ +VK
Sbjct: 1 MATVGNKNVQAKLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 LEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLDSFVRAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+D+++ KV+ EEA+ YAQENGLFFMETSAKTA NVN++FYEIA+RLP+ +P +P
Sbjct: 121 AGNKSDMIEKSKVSPEEAKVYAQENGLFFMETSAKTAQNVNELFYEIARRLPKAEPVQHP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL DR ER S+SCCS
Sbjct: 181 AGMVLADRSAERARSSSCCS 200
>gi|115454491|ref|NP_001050846.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|40538929|gb|AAR87186.1| putative small GTP-binding protein [Oryza sativa Japonica Group]
gi|108710277|gb|ABF98072.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113549317|dbj|BAF12760.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|215692370|dbj|BAG87790.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695240|dbj|BAG90431.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/201 (84%), Positives = 179/201 (89%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN + V+ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNKADLL+ R+V EEA+ YAQENGLFFMETSAKTATNVNDIFYEIAKRL + QPA NP
Sbjct: 123 GNKADLLETRQVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRLLQGQPAQNPQ 182
Query: 181 SGMVLMDRPGER-TASASCCS 200
+GMVL RP ER +SASCCS
Sbjct: 183 AGMVLSQRPNERLVSSASCCS 203
>gi|28866038|emb|CAD26971.1| Rab-related small GTP-binding protein [Simmondsia chinensis]
Length = 200
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/200 (80%), Positives = 177/200 (88%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSL+L FVKG F+EFQESTIGAAFFS TLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLLLLFVKGHFLEFQESTIGAAFFSHTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYH LAPMYYRGAAAAIIVYDIT+ SF AKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHILAPMYYRGAAAAIIVYDITSADSFALAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL D R V AEEA+ YA++NGLFFMETSAKTA NVN+IFYEIAKRLPR QP NP
Sbjct: 121 AGNKADLEDRRSVPAEEARIYAEDNGLFFMETSAKTALNVNEIFYEIAKRLPRAQPPQNP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL+DRP E + +++CCS
Sbjct: 181 AGMVLVDRPPEGSRASTCCS 200
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/201 (82%), Positives = 179/201 (89%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVG GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-P 180
GNKAD+++AR+V AEEA+ YAQENGLFFMETSAKTA NVND+F+EIAKRL + Q A N P
Sbjct: 123 GNKADMIEARQVPAEEARTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQNTP 182
Query: 181 SGMVLMDRPGER-TASASCCS 200
+GMVL RP ER +S+SCCS
Sbjct: 183 AGMVLNQRPAERMVSSSSCCS 203
>gi|226498408|ref|NP_001147694.1| ras-related protein RHN1 [Zea mays]
gi|195613140|gb|ACG28400.1| ras-related protein RHN1 [Zea mays]
gi|195652993|gb|ACG45964.1| ras-related protein RHN1 [Zea mays]
gi|238006674|gb|ACR34372.1| unknown [Zea mays]
Length = 203
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 166/201 (82%), Positives = 177/201 (88%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANFGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN ++ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNK D+LDAR V EEA+ YAQENGLFFMETSAKTA NVNDIFYEIAKRL + Q AP+P
Sbjct: 123 GNKVDMLDARHVAVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQEAPSPQ 182
Query: 181 SGMVLMDRPGERTAS-ASCCS 200
+G+VL RP ER S +SCCS
Sbjct: 183 AGIVLNQRPDERMVSTSSCCS 203
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/201 (82%), Positives = 177/201 (88%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 48 ANFGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 107
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN ++ALA
Sbjct: 108 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALA 167
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNK D+LDAR V EEA+ YAQENGLFFMETSAKTA NVNDIFYEIAKRL + Q AP+P
Sbjct: 168 GNKVDMLDARHVAVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQEAPSPQ 227
Query: 181 SGMVLMDRPGERTAS-ASCCS 200
+G+VL RP ER S +SCCS
Sbjct: 228 AGIVLNQRPDERMVSTSSCCS 248
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/204 (81%), Positives = 181/204 (88%), Gaps = 4/204 (1%)
Query: 1 MATT--GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT 58
MA T GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND T
Sbjct: 1 MAATAGGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDET 60
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
VKFEIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN N ++
Sbjct: 61 VKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIV 120
Query: 119 ALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
ALAGNKADLLD R+V+A+EA+AYAQENGLFFMETSAKTATNVND+FYEIAK+L + Q
Sbjct: 121 ALAGNKADLLDTRQVSADEAKAYAQENGLFFMETSAKTATNVNDVFYEIAKKLLQGQQVQ 180
Query: 179 NP-SGMVLMDRPGER-TASASCCS 200
NP GMVL RP ER +S+SCC+
Sbjct: 181 NPQGGMVLNQRPPERMVSSSSCCA 204
>gi|116779293|gb|ABK21222.1| unknown [Picea sitchensis]
gi|116790907|gb|ABK25786.1| unknown [Picea sitchensis]
Length = 200
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/200 (78%), Positives = 174/200 (87%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MATTG N+ AKLVLLGD+G GKSSLVLRFVKGQF+++QESTIGAAFFSQTLAVN+ TVK
Sbjct: 1 MATTGTNNMQAKLVLLGDMGTGKSSLVLRFVKGQFLDYQESTIGAAFFSQTLAVNEVTVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN SF RAK WV ELQ QGNPN+VMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNSDSFVRAKNWVLELQKQGNPNLVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKAD+ RKV AEEA+ YA+ENGLFFMETSAKTA NVN++FYEIA+RLP+ +P P
Sbjct: 121 AGNKADVAAKRKVEAEEAETYAKENGLFFMETSAKTAQNVNELFYEIARRLPKARPVQQP 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL DRP ER + SCCS
Sbjct: 181 AGMVLTDRPAERARTYSCCS 200
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/201 (81%), Positives = 179/201 (89%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVG GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-P 180
GNKAD+++AR+V AEEA+ YAQENGLFFMETSAKTA NVND+F+EIAKRL + Q A + P
Sbjct: 123 GNKADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTP 182
Query: 181 SGMVLMDRPGER-TASASCCS 200
+GMVL RP ER +S+SCCS
Sbjct: 183 AGMVLNQRPAERMVSSSSCCS 203
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/201 (81%), Positives = 178/201 (88%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVG GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYH LAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63 EIWDTAGQERYHGLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-P 180
GNKAD+++AR+V AEEA+ YAQENGLFFMETSAKTA NVND+F+EIAKRL + Q A + P
Sbjct: 123 GNKADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTP 182
Query: 181 SGMVLMDRPGER-TASASCCS 200
+GMVL RP ER +S+SCCS
Sbjct: 183 AGMVLNQRPAERMVSSSSCCS 203
>gi|357153419|ref|XP_003576446.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 206
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/192 (84%), Positives = 173/192 (90%), Gaps = 1/192 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A G+K NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 5 AAAGSKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 64
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN VMALA
Sbjct: 65 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTVMALA 124
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNKAD+L+AR+V EEA+ YAQENGLFFMETSAKTATNVND+FYEIAKRL + Q A NP
Sbjct: 125 GNKADMLEARQVPMEEAKTYAQENGLFFMETSAKTATNVNDVFYEIAKRLLQGQQAQNPQ 184
Query: 181 SGMVLMDRPGER 192
+GMVL RP ER
Sbjct: 185 AGMVLSQRPTER 196
>gi|326491951|dbj|BAJ98200.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/193 (83%), Positives = 170/193 (88%), Gaps = 2/193 (1%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
NAKLVLLGDVG GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKFEIWDTAGQ
Sbjct: 16 NAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQ 75
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERYHSLAPMYYRGAAAAI+VYDITN A F RAKKWVQELQAQGNPN VMALAGNKAD+L+
Sbjct: 76 ERYHSLAPMYYRGAAAAIVVYDITNAAPFTRAKKWVQELQAQGNPNTVMALAGNKADMLE 135
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDR 188
AR+V EEA YAQENGLFFMETSAKTA NVND+FYEIAKRL Q A NP +GMVL R
Sbjct: 136 ARQVPVEEATTYAQENGLFFMETSAKTAINVNDVFYEIAKRLLAGQQAQNPQAGMVLSQR 195
Query: 189 PGER-TASASCCS 200
P ER +S SCCS
Sbjct: 196 PAERMVSSTSCCS 208
>gi|195643312|gb|ACG41124.1| ras-related protein RHN1 [Zea mays]
Length = 203
Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/201 (81%), Positives = 174/201 (86%), Gaps = 2/201 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANFGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN AS KKWVQELQAQGNPN ++ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASTTCTKKWVQELQAQGNPNTIVALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP- 180
GNK D+LDAR V EEA+ YAQENGLFFMETSAKTA NVNDIFYEIAKRL + Q AP+P
Sbjct: 123 GNKVDMLDARHVAVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRLLQGQEAPSPQ 182
Query: 181 SGMVLMDRPGERTAS-ASCCS 200
+G+VL RP ER S +SCCS
Sbjct: 183 AGIVLNQRPDERMVSTSSCCS 203
>gi|4741844|gb|AAD28731.1|AF112964_1 small GTP-binding protein [Triticum aestivum]
Length = 209
Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/193 (82%), Positives = 170/193 (88%), Gaps = 2/193 (1%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
NAKLVLLGDVG GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKFEIWDTAGQ
Sbjct: 16 NAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQ 75
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN VMALAGNKAD+L+
Sbjct: 76 ERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTVMALAGNKADMLE 135
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDR 188
AR+V EEA YAQ NGLFF+ETSAKTA NVND+FYE+AKRL Q A NP +GMVL R
Sbjct: 136 ARQVPVEEATTYAQGNGLFFIETSAKTAINVNDVFYELAKRLLAGQQAQNPQAGMVLSQR 195
Query: 189 PGER-TASASCCS 200
P ER +S SCCS
Sbjct: 196 PAERMVSSTSCCS 208
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 159/192 (82%), Positives = 172/192 (89%), Gaps = 1/192 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVG GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-P 180
GNKAD+++AR+V AEEA+ YAQENGLFFMETSAKTA NVND+F+EIAKRL + Q A + P
Sbjct: 123 GNKADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTP 182
Query: 181 SGMVLMDRPGER 192
+GMVL RP ER
Sbjct: 183 AGMVLNQRPAER 194
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/200 (76%), Positives = 172/200 (86%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MATTG ++ AKLVLLGD+GAGKSSLVLRFVKGQF ++QESTIGAAF +QTLAVN+ TVK
Sbjct: 1 MATTGMNHMQAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNETTVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN SF RAKKWVQELQ QGN N+VMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNAESFARAKKWVQELQRQGNANLVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL RK+ +E Q+YA ENGLFFMETSAKTA NVN++FYEIA++LP+ QPA
Sbjct: 121 AGNKADLAAKRKIETQEGQSYADENGLFFMETSAKTAENVNELFYEIARKLPKAQPAQQN 180
Query: 181 SGMVLMDRPGERTASASCCS 200
+GMVL DRP E T ++CC+
Sbjct: 181 TGMVLTDRPIE-TKKSACCN 199
>gi|255550727|ref|XP_002516412.1| protein with unknown function [Ricinus communis]
gi|223544447|gb|EEF45967.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/162 (95%), Positives = 156/162 (96%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT GNKNINAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATAGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVND 162
AGNKADLLDARKV EEAQ YAQENGLFFMETSAKTATN D
Sbjct: 121 AGNKADLLDARKVATEEAQVYAQENGLFFMETSAKTATNQKD 162
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 171/202 (84%), Gaps = 3/202 (1%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MATTG ++ AKLVLLGD+GAGKSSL LRFVKGQF ++QESTIGAAF +QTLAVN+ TVK
Sbjct: 1 MATTGANHMQAKLVLLGDMGAGKSSLALRFVKGQFFDYQESTIGAAFLTQTLAVNETTVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN SF RAKKWVQELQ QGNPN+VMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL RK+ AEE Q+YA+ENGLFFMETSAKT+ NVN++FYEIA++LP+ QPA
Sbjct: 121 AGNKADLSSKRKIEAEEGQSYAEENGLFFMETSAKTSQNVNELFYEIARKLPKAQPA-QA 179
Query: 181 SGMVLMDRPGERT--ASASCCS 200
SGM L D R A ++CC+
Sbjct: 180 SGMSLTDGSTSRLGPAKSTCCA 201
>gi|108863008|gb|ABA99930.2| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
Length = 249
Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/247 (66%), Positives = 179/247 (72%), Gaps = 48/247 (19%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVG GKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI-------------- 167
GNKAD+++AR+V AEEA+ YAQENGLFFMETSAKTA NVND+F+EI
Sbjct: 123 GNKADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIGEFRSQIISAVDFC 182
Query: 168 --------------------------------AKRLPRVQPAPN-PSGMVLMDRPGER-T 193
AKRL + Q A + P+GMVL RP ER
Sbjct: 183 TPTELVGYLVYKNVHSLLLLISKRICILNLISAKRLLQGQQAQDTPAGMVLNQRPAERMV 242
Query: 194 ASASCCS 200
+S+SCCS
Sbjct: 243 SSSSCCS 249
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/202 (74%), Positives = 170/202 (84%), Gaps = 3/202 (1%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MATTG + AKLVLLGD+GAGKSSL LRFV+GQF ++QESTIGAAF +QTLAVN+ TVK
Sbjct: 1 MATTGANHTQAKLVLLGDMGAGKSSLSLRFVRGQFFDYQESTIGAAFLTQTLAVNETTVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITN SF RAKKWVQELQ QGNPN+VMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNKADL RKV AEE Q+YA+ENGLFFMETSAKTA NVN++FYEIA++LP+ QPA
Sbjct: 121 AGNKADLSAKRKVEAEEGQSYAEENGLFFMETSAKTAQNVNELFYEIARKLPKAQPA-QA 179
Query: 181 SGMVLMDRPGERT--ASASCCS 200
+G+ L D+ R A +CC+
Sbjct: 180 TGVSLTDKSSSRLTPAKTTCCA 201
>gi|297738167|emb|CBI27368.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/179 (84%), Positives = 159/179 (88%), Gaps = 1/179 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MAT G+ N+NAKLVLLGD+GAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
AGNKADL D RKVTAEEA+ YA+ENGLFF ETSAKTA NVND FYEI P V PN
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIVVS-PVVSQLPN 178
>gi|413933483|gb|AFW68034.1| putative GTP-binding protein [Zea mays]
Length = 199
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/168 (88%), Positives = 156/168 (92%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN N ++ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALA 122
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
GNKAD+LDAR+V AEEA+AYAQENGLFFMETSAKTA NVNDIFYEI +
Sbjct: 123 GNKADMLDARQVPAEEAKAYAQENGLFFMETSAKTAINVNDIFYEIGE 170
>gi|148908627|gb|ABR17422.1| unknown [Picea sitchensis]
Length = 198
Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/195 (73%), Positives = 167/195 (85%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
G N++AKLVLLGD+GAGKSS+VLRFV+GQF E+QESTIGAAFFSQTLA+N+ T+KFEIW
Sbjct: 2 GANNMSAKLVLLGDMGAGKSSMVLRFVRGQFFEYQESTIGAAFFSQTLALNETTIKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGAAAAI+VYDIT+ SF RAKKWVQELQ QGNPNMVM LAGNK
Sbjct: 62 DTAGQERYHSLAPMYYRGAAAAIVVYDITSLDSFNRAKKWVQELQRQGNPNMVMTLAGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL RKV EEAQAYA ENGLFF+ETSAKTA NVN++FY+IAKR+ + +P + G++
Sbjct: 122 ADLTAKRKVELEEAQAYATENGLFFIETSAKTAQNVNELFYDIAKRVLKARPDKSTPGLL 181
Query: 185 LMDRPGERTASASCC 199
L +R E + +SCC
Sbjct: 182 LGNRSEEGSRFSSCC 196
>gi|224142139|ref|XP_002324416.1| predicted protein [Populus trichocarpa]
gi|222865850|gb|EEF02981.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/200 (70%), Positives = 163/200 (81%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA TG+ NI AKLVLLGD+G GK+SLVLRFVKGQF+EFQESTIGAAFF+Q L++N+AT+K
Sbjct: 1 MARTGSNNIQAKLVLLGDMGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDIT+ SFERAKKWV ELQ QGNPN++M L
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVTELQRQGNPNLIMFL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
GNK DL RKV EE + YA+ENG+ F+ETSAKTA NVN++FYEIAKRL + P+ P
Sbjct: 121 VGNKVDLQQKRKVGIEEGEQYAKENGMVFLETSAKTAQNVNELFYEIAKRLAKKAPS-RP 179
Query: 181 SGMVLMDRPGERTASASCCS 200
GM L RP E CCS
Sbjct: 180 IGMKLHRRPQETRRRMFCCS 199
>gi|255546521|ref|XP_002514320.1| protein with unknown function [Ricinus communis]
gi|223546776|gb|EEF48274.1| protein with unknown function [Ricinus communis]
Length = 199
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 166/200 (83%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA NKNI AKLVLLGD+G GK+SLVLRFVKGQF +FQESTIGAAFF+Q L++N+AT+K
Sbjct: 1 MARPNNKNIQAKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEATIK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDIT+ SFERAK+WV ELQ QGNPN++M L
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSTDSFERAKRWVLELQRQGNPNLIMFL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
A NK DL D RKV +EE + YA+ENGL F+ETSAKTA NVN++FYEIAK+L + P+ P
Sbjct: 121 AANKVDLGDKRKVASEEGEQYAKENGLVFLETSAKTAQNVNELFYEIAKKLAKAAPS-RP 179
Query: 181 SGMVLMDRPGERTASASCCS 200
+GM L +R ER+ CCS
Sbjct: 180 TGMKLQNRQPERSRGMFCCS 199
>gi|225445266|ref|XP_002284542.1| PREDICTED: ras-related protein RHN1 isoform 1 [Vitis vinifera]
gi|359484588|ref|XP_003633124.1| PREDICTED: ras-related protein RHN1 isoform 2 [Vitis vinifera]
gi|297738837|emb|CBI28082.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 162/200 (81%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA TGNKNI AKLVLLGD+G GK+SLVLRFVKGQF +FQESTIGAAFF+Q L++N+AT+K
Sbjct: 1 MARTGNKNIQAKLVLLGDMGTGKTSLVLRFVKGQFYDFQESTIGAAFFTQVLSLNEATIK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDIT+ SFERAKKWVQELQ QGNPN++M L
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLLMIL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
NKADL R+V E+ + YA+ENGL F ETSAKTA NVN++FYEIAK L + P+ P
Sbjct: 121 VANKADLETKREVENEKGEQYAKENGLLFFETSAKTAQNVNELFYEIAKNLAKACPS-RP 179
Query: 181 SGMVLMDRPGERTASASCCS 200
G+ L R ER CCS
Sbjct: 180 GGIKLHRRSQERGRRLFCCS 199
>gi|255075421|ref|XP_002501385.1| predicted protein [Micromonas sp. RCC299]
gi|226516649|gb|ACO62643.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/196 (71%), Positives = 164/196 (83%), Gaps = 5/196 (2%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ AKLVLLGD+GAGKSSLVLRFVKGQF E+QESTIGAAF +QT++V+DATVKFEIWDTAG
Sbjct: 7 MQAKLVLLGDMGAGKSSLVLRFVKGQFFEYQESTIGAAFLTQTVSVSDATVKFEIWDTAG 66
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QERYHSLAPMYYRGAAAAIIVYDI + +SFERAK WV+ELQ QGN N+VMALAGNKAD+
Sbjct: 67 QERYHSLAPMYYRGAAAAIIVYDIQSPSSFERAKSWVRELQRQGNANLVMALAGNKADIA 126
Query: 129 ----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ-PAPNPSGM 183
+ RKV A+EAQAYA ENGLFFMETSA+TA NVND+FYEIA++LPR + P P +G+
Sbjct: 127 EKEPEKRKVDADEAQAYADENGLFFMETSARTAANVNDLFYEIARKLPRAEPPTPAAAGV 186
Query: 184 VLMDRPGERTASASCC 199
L + + + CC
Sbjct: 187 TLSAQRQSQRPKSQCC 202
>gi|356511351|ref|XP_003524390.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 161/200 (80%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA T NK++ AKLVLLGD+GAGK+SLVLRFVKG+F E+QESTIGAAFF+ L++N+ATVK
Sbjct: 1 MARTRNKSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQESTIGAAFFTHVLSLNEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAAI+VYDIT+ SF RAKKWV+E+Q Q N ++ M L
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANSSLTMFL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
NKADL D RKV EE + YA+ENGL F+ETSAKTA NVN++FYEIAKRL + P+
Sbjct: 121 VANKADLEDERKVRYEEGEEYAKENGLSFLETSAKTAQNVNELFYEIAKRLVKANPS-RQ 179
Query: 181 SGMVLMDRPGERTASASCCS 200
SGM L RPGE CC+
Sbjct: 180 SGMKLHTRPGETRRGFLCCT 199
>gi|356527789|ref|XP_003532489.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 199
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 161/200 (80%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA TGNK++ AKLVLLGD+GAGK+SLVLRFVKG+F E+Q+STIGAAFF+Q L++N+ATVK
Sbjct: 1 MARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGEFSEYQDSTIGAAFFTQVLSLNEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAAI+VYDIT+ SF RAKKWV+E+ QGN VM L
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVLRQGNCQNVMFL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
NKADL RKV EE + YA+ENGL F+ETSAKTA NVN++FYEIAKRL + P+
Sbjct: 121 VANKADLEAERKVRYEEGEEYAKENGLSFLETSAKTAQNVNELFYEIAKRLAKANPS-RQ 179
Query: 181 SGMVLMDRPGERTASASCCS 200
SGM L +R GE CC+
Sbjct: 180 SGMKLHNRAGETRRGFFCCT 199
>gi|224070895|ref|XP_002303285.1| predicted protein [Populus trichocarpa]
gi|222840717|gb|EEE78264.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 160/200 (80%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK I AKLVLLGD+G GK+SLVLRFVKGQF + QE TIGAAFF+Q L++ +ATVK
Sbjct: 1 MARPGNKIIQAKLVLLGDMGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLTEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAA+IVYDI++ +F RAK+WVQELQ QGNP MVMAL
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVIVYDISSMDTFVRAKRWVQELQRQGNPKMVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
NK DL R+V E+ + ++QENG+FFMETSAKTA N+N++FYEIAKRL + P+ +
Sbjct: 121 VANKLDLDSKREVQNEDGEQFSQENGMFFMETSAKTAQNINELFYEIAKRLAKAYPSKS- 179
Query: 181 SGMVLMDRPGERTASASCCS 200
+G+ L D RT + CCS
Sbjct: 180 TGVNLNDETESRTRNLFCCS 199
>gi|413933482|gb|AFW68033.1| hypothetical protein ZEAMMB73_435802 [Zea mays]
Length = 177
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/163 (83%), Positives = 148/163 (90%), Gaps = 2/163 (1%)
Query: 40 ESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFE 99
ESTIGAAFFSQTLAVND TVKFEIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF
Sbjct: 15 ESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFT 74
Query: 100 RAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATN 159
RAKKWVQELQAQGN N ++ALAGNKAD+LDAR+V AEEA+AYAQENGLFFMETSAKTA N
Sbjct: 75 RAKKWVQELQAQGNQNTIVALAGNKADMLDARQVPAEEAKAYAQENGLFFMETSAKTAIN 134
Query: 160 VNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGERT-ASASCCS 200
VNDIFYEIAK+L + Q AP+P +GMVL RP ERT +S+SCCS
Sbjct: 135 VNDIFYEIAKKLLQGQQAPSPQAGMVLNQRPNERTVSSSSCCS 177
>gi|303279212|ref|XP_003058899.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460059|gb|EEH57354.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/192 (74%), Positives = 165/192 (85%), Gaps = 2/192 (1%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ AKLVLLGD+GAGKSSLVLRFVKGQF ++QESTIGAAF +Q +AVNDATVKFEIWDTAG
Sbjct: 4 MQAKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQCVAVNDATVKFEIWDTAG 63
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL- 127
QERYHSLAPMYYRGAAAAIIVYDI++Q+SF RAK WV+ELQ QGN ++VMALAGNKADL
Sbjct: 64 QERYHSLAPMYYRGAAAAIIVYDISSQSSFARAKSWVKELQRQGNASLVMALAGNKADLS 123
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-GMVLM 186
+ R+V A EA+AYA+ENGLFFMETSAKTA NVND+FYEIA++LPR P+ G+VL
Sbjct: 124 AEKREVEASEAEAYAEENGLFFMETSAKTAANVNDLFYEIARKLPRTAAPSTPAPGVVLD 183
Query: 187 DRPGERTASASC 198
R G +T SA C
Sbjct: 184 SRRGAQTKSACC 195
>gi|359482942|ref|XP_002284702.2| PREDICTED: ras-related protein RHN1-like [Vitis vinifera]
gi|297743285|emb|CBI36152.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 159/202 (78%), Gaps = 6/202 (2%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA NKNI AKLVL+GD+G GK+SLVLRFVKGQF E QE TIGAAFF+Q L++N+ATVK
Sbjct: 1 MARPSNKNIQAKLVLVGDMGTGKTSLVLRFVKGQFFEHQEPTIGAAFFTQLLSLNEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDI+N +F RAKKWVQELQ QGN N+VMAL
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISNVDTFVRAKKWVQELQKQGNKNLVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
NK DL R+V +E + ++ENG+FF+ETSAKT+ N+N++FYEIAKRL QP+ P
Sbjct: 121 VANKCDLESKREVNTQEGEKLSEENGMFFIETSAKTSLNINELFYEIAKRLAIAQPS-QP 179
Query: 181 SGMVL--MDRPGERTASASCCS 200
SGM L + G R CCS
Sbjct: 180 SGMNLHETENSGRRLF---CCS 198
>gi|384252326|gb|EIE25802.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 199
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 155/192 (80%), Gaps = 4/192 (2%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
AKLVLLGD+GAGKSSLVLRFVKGQF ++QESTIGAAF ++T + + VKFEIWDTAGQE
Sbjct: 10 AKLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTKT--IPEKGVKFEIWDTAGQE 67
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RYHSLAPMYYRGAAAA++V+DITN SF +AK WV+ELQ QGNPNM+MALAGNKADL
Sbjct: 68 RYHSLAPMYYRGAAAAVVVFDITNAESFAKAKNWVKELQRQGNPNMIMALAGNKADLAAQ 127
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP--SGMVLMDR 188
R VT+E+A+AYA EN LFF ETSAKT NV ++F++IA+RLPR AP P G+ L +
Sbjct: 128 RAVTSEDAKAYADENSLFFWETSAKTNVNVAEVFHDIAERLPRASAAPQPPVGGITLTET 187
Query: 189 PGERTASASCCS 200
ER ++CCS
Sbjct: 188 VPERAKKSACCS 199
>gi|260807647|ref|XP_002598620.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
gi|229283893|gb|EEN54632.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
Length = 213
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +FERAK WV+ELQ Q +PN+V+AL+GNKADL + R
Sbjct: 80 YHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQASPNIVIALSGNKADLANKR 139
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM-----VLM 186
V EEAQAYA++N L FMETSAKTA NVNDIF IAK+LP+ +PA V +
Sbjct: 140 MVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKLPKNEPAGGAGNQAQGRRVDL 199
Query: 187 DRPGERTASASCC 199
G + AS++CC
Sbjct: 200 KETGNQQASSTCC 212
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 154/194 (79%), Gaps = 1/194 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
N+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++DAT+KFEIWD
Sbjct: 16 NRTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWD 75
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITNQ SF++AK WV+ELQ Q +PN+VMALAGNKA
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKA 135
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
D+ + R V EEA AYA++N L FMETSAKT+ NVNDIF IAK+LP P+G V
Sbjct: 136 DVANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLPIGPAQGEPTGTVD 195
Query: 186 MDRPGERTASASCC 199
M++P ++ SCC
Sbjct: 196 MNQP-QQQQKGSCC 208
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 154/194 (79%), Gaps = 1/194 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
N+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++DAT+KFEIWD
Sbjct: 14 NRTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWD 73
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITNQ SF++AK WV+ELQ Q +PN+VMALAGNKA
Sbjct: 74 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKA 133
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
D+ + R V EEA AYA++N L FMETSAKT+ NVNDIF IAK+LP P+G V
Sbjct: 134 DVANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLPIGPAQGEPTGTVD 193
Query: 186 MDRPGERTASASCC 199
M++P ++ SCC
Sbjct: 194 MNQP-QQQQKGSCC 206
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/195 (67%), Positives = 157/195 (80%), Gaps = 3/195 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
N+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++DAT+KFEIWD
Sbjct: 15 NRTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWD 74
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITNQ SF++AK WV+ELQ Q +PN+VMALAGNKA
Sbjct: 75 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKA 134
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-NPSGMV 184
D+ + R V EEA AYA++N L FMETSAKT+ NVNDIF IAK+LP + PA P+G V
Sbjct: 135 DVANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP-IGPAQGEPTGTV 193
Query: 185 LMDRPGERTASASCC 199
M++P ++ SCC
Sbjct: 194 DMNQP-QQQQKGSCC 207
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 158/201 (78%), Gaps = 4/201 (1%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFE
Sbjct: 13 STQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RA+ WV+ELQ Q +P++V+ALAG
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAG 132
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS- 181
NKADL + R V +EAQ YA ENGL FMETSAKTA NVNDIF IAK+LP+ + + N S
Sbjct: 133 NKADLANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGNAST 192
Query: 182 ---GMVLMDRPGERTASASCC 199
G L++ G++ A+++CC
Sbjct: 193 SGQGRRLVESDGQKAATSNCC 213
>gi|159477721|ref|XP_001696957.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274869|gb|EDP00649.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/191 (67%), Positives = 157/191 (82%), Gaps = 4/191 (2%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
AKLVLLG++G+GKSSLVLR+VKGQF ++Q ST+GAAF ++TL + VKFEIWDTAGQE
Sbjct: 14 AKLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTLP--ELNVKFEIWDTAGQE 71
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RYHSLAPMYYRGAAAAIIVYDIT+ SF RAK WV+ELQ QGNPNM+MALAGNKADL
Sbjct: 72 RYHSLAPMYYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPNMIMALAGNKADLEGQ 131
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP--SGMVLMDR 188
R VT EEAQAYA ENGLF++ETSAKT+ NVN++F EIA++LP+ + AP P G+VL +
Sbjct: 132 RAVTVEEAQAYAAENGLFYVETSAKTSANVNELFEEIARKLPKPEAAPRPPQGGIVLSEN 191
Query: 189 PGERTASASCC 199
++ ++CC
Sbjct: 192 QQQQPKKSTCC 202
>gi|428174756|gb|EKX43650.1| hypothetical protein GUITHDRAFT_159784 [Guillardia theta CCMP2712]
Length = 204
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 161/202 (79%), Gaps = 3/202 (1%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA +N KLVLLG+ GKSSLVLRFV+GQF ++QESTIGAAF +QT+A+ND TVK
Sbjct: 1 MAAQNKSPLNFKLVLLGEGAVGKSSLVLRFVRGQFFDYQESTIGAAFLTQTVALNDTTVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAI+VYDIT+ SF RAK WV+ELQ QGNPN+V+AL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSTDSFARAKSWVRELQRQGNPNIVIAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
AGNK+DL RKV +EA+ YA+EN + FMETSAKTA+NVN++F +IA++LP+ Q P
Sbjct: 121 AGNKSDLASKRKVEPDEARQYAEENNIMFMETSAKTASNVNELFVQIARKLPKQQQQDKP 180
Query: 181 SGM--VLMDRPGERTASASCCS 200
SG + ++ P ++ A A+ CS
Sbjct: 181 SGSANIKVNEP-KQDAKANNCS 201
>gi|340718353|ref|XP_003397633.1| PREDICTED: ras-related protein Rab-5C-like [Bombus terrestris]
gi|350401655|ref|XP_003486219.1| PREDICTED: ras-related protein Rab-5C-like [Bombus impatiens]
Length = 214
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 157/202 (77%), Gaps = 4/202 (1%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKF
Sbjct: 12 GSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF 71
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RA+ WV+ELQ Q +P++V+ALA
Sbjct: 72 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALA 131
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNKADL + R V +EAQ YA ENGL FMETSAKTA NVNDIF IAK+LP+ + + N S
Sbjct: 132 GNKADLSNKRVVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGNAS 191
Query: 182 ----GMVLMDRPGERTASASCC 199
G L++ G++ A+ +CC
Sbjct: 192 TSGQGRRLVETEGQKAATGNCC 213
>gi|356556138|ref|XP_003546384.1| PREDICTED: ras-related protein RABF2b-like [Glycine max]
Length = 200
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/200 (65%), Positives = 155/200 (77%), Gaps = 1/200 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK I AKLVLLGD+G GK+S+ LRFVKG F QE TIGAAFF+Q L++++ATVK
Sbjct: 1 MARPGNKIIQAKLVLLGDMGTGKTSIALRFVKGHFFPNQEPTIGAAFFTQILSLSEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAAI+VYDI++ +F RAKKWVQELQ GN VMAL
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDISSVDTFVRAKKWVQELQTHGNQKSVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
NK+DL R+V AE + +AQENG+F+METSAKTA N+N++FYEIAKRL R P P P
Sbjct: 121 VANKSDLEPKREVEAEVGEQFAQENGMFYMETSAKTAENINELFYEIAKRLARALP-PKP 179
Query: 181 SGMVLMDRPGERTASASCCS 200
+GM L +R + CCS
Sbjct: 180 TGMNLNSDIQDRGRNYFCCS 199
>gi|332017090|gb|EGI57889.1| Ras-related protein Rab-5C [Acromyrmex echinatior]
Length = 214
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 157/201 (78%), Gaps = 4/201 (1%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFE
Sbjct: 13 STQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RA+ WV+ELQ Q +P++V+ALAG
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAG 132
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS- 181
NKADL + R V +EAQ YA ENGL FMETSAKTA NVNDIF IAK+LP+ + + + S
Sbjct: 133 NKADLANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSAST 192
Query: 182 ---GMVLMDRPGERTASASCC 199
G L++ G++ A+ +CC
Sbjct: 193 SGQGRRLVESDGQKAATGNCC 213
>gi|307189232|gb|EFN73680.1| Ras-related protein Rab-5C [Camponotus floridanus]
gi|322784961|gb|EFZ11732.1| hypothetical protein SINV_10350 [Solenopsis invicta]
Length = 214
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 157/201 (78%), Gaps = 4/201 (1%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFE
Sbjct: 13 STQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RA+ WV+ELQ Q +P++V+ALAG
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAG 132
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS- 181
NKADL + R V +EAQ YA ENGL FMETSAKTA NVNDIF IAK+LP+ + + + S
Sbjct: 133 NKADLANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSAST 192
Query: 182 ---GMVLMDRPGERTASASCC 199
G L++ G++ A+ +CC
Sbjct: 193 SGQGRRLVESDGQKAATGNCC 213
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 154/192 (80%), Gaps = 4/192 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ +++ TVKFEIWDTAGQER
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RA WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQDTFMRATTWVKELQRQASPSIVIALAGNKADLGNKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS----GMVLMD 187
V EEAQAYA ENGL FMETSAKTA NVNDIF IAK+LP+ + A N S G L++
Sbjct: 141 VVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQAGNASTSGQGRRLVE 200
Query: 188 RPGERTASASCC 199
G++ A+ +CC
Sbjct: 201 SEGQKPATGNCC 212
>gi|383854195|ref|XP_003702607.1| PREDICTED: ras-related protein Rab-5C-like [Megachile rotundata]
Length = 214
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 157/201 (78%), Gaps = 4/201 (1%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFE
Sbjct: 13 STQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RA+ WV+ELQ Q +P++V+ALAG
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAG 132
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS- 181
NKADL + R V EEAQ YA ENGL FMETSAKTA NVNDIF IAK+LP+ + + + S
Sbjct: 133 NKADLANKRVVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSAST 192
Query: 182 ---GMVLMDRPGERTASASCC 199
G L++ G++ A+ +CC
Sbjct: 193 SGQGRRLVEAEGQKAATGNCC 213
>gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas]
Length = 213
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/191 (67%), Positives = 151/191 (79%), Gaps = 3/191 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNK+DL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDLAQKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ---PAPNPSGMVLMDR 188
V EEAQAYA+EN L FMETSAKTA NVNDIF IAK+LP+ + PAP+ G V ++
Sbjct: 142 MVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEGGGPAPSRPGGVNLNS 201
Query: 189 PGERTASASCC 199
+ + CC
Sbjct: 202 QQTQQSEGGCC 212
>gi|380019933|ref|XP_003693855.1| PREDICTED: ras-related protein Rab-5C-like [Apis florea]
Length = 214
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 157/201 (78%), Gaps = 4/201 (1%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFE
Sbjct: 13 STQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RA+ WV+ELQ Q +P++V+ALAG
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAG 132
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS- 181
NKADL + R V +EAQ YA ENGL FMETSAKTA NVNDIF IAK+LP+ + + + S
Sbjct: 133 NKADLANKRIVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQSGSAST 192
Query: 182 ---GMVLMDRPGERTASASCC 199
G L++ G++ A+ +CC
Sbjct: 193 SGQGRRLVETEGQKAATGNCC 213
>gi|357521023|ref|XP_003630800.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355524822|gb|AET05276.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 190
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 150/187 (80%), Gaps = 1/187 (0%)
Query: 14 VLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 73
VLLGD+G GK+SLVLRFVKGQF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYH
Sbjct: 5 VLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYH 64
Query: 74 SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKV 133
SLAPMYYRG+AAAI+VYDIT+ SF RAKKWV+E+Q Q NPN++M L NKADL D RKV
Sbjct: 65 SLAPMYYRGSAAAIVVYDITSMDSFVRAKKWVREVQRQANPNLIMLLVANKADLEDQRKV 124
Query: 134 TAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERT 193
EE + YA+ENG+ F ETSAKTA NVN++FYEIAKRL + P+ +G+ L R E
Sbjct: 125 GNEEGEEYAKENGMSFFETSAKTAQNVNELFYEIAKRLAKANPS-RQTGIKLHGRTQETR 183
Query: 194 ASASCCS 200
CC+
Sbjct: 184 RRLFCCA 190
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 156/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP G
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGGN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|225717846|gb|ACO14769.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 220
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/191 (68%), Positives = 148/191 (77%), Gaps = 3/191 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 27 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQER 86
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYD+TNQ SF RAK WV+ELQ Q +PN+V+ALAGNK DL R
Sbjct: 87 YHSLAPMYYRGAQAAIVVYDVTNQDSFTRAKNWVKELQRQASPNIVIALAGNKNDLTTKR 146
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN--PSGMVLMDRP 189
V EEAQ YA+ENGL FMETSAKTA NVNDIF EIAK+LP+ + N G L + P
Sbjct: 147 LVMYEEAQTYAEENGLLFMETSAKTALNVNDIFMEIAKKLPKDGDSGNSQSGGHRLTNGP 206
Query: 190 GERTASA-SCC 199
+ S CC
Sbjct: 207 NAESRSGFQCC 217
>gi|302833012|ref|XP_002948070.1| RabF/Rab5 [Volvox carteri f. nagariensis]
gi|300266872|gb|EFJ51058.1| RabF/Rab5 [Volvox carteri f. nagariensis]
Length = 203
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 155/193 (80%), Gaps = 5/193 (2%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
AKLVLLG++G+GKSSLVLR+VKGQF ++Q ST+GAAF ++TL + VKFEIWDTAGQ
Sbjct: 13 TAKLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTLP--ELNVKFEIWDTAGQ 70
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERYHSLAPMYYRGAAAAIIVYDIT+ SF RAK WV+ELQ QGNP M+MALAGNKADL
Sbjct: 71 ERYHSLAPMYYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPVMIMALAGNKADLES 130
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP---SGMVLM 186
R V+ EE QAYA ENGL+++ETSAKTA NVN++F EIA++LP+ + AP P G+VL
Sbjct: 131 QRAVSVEEGQAYAAENGLYYLETSAKTAANVNELFEEIARKLPKPETAPRPVQGGGIVLE 190
Query: 187 DRPGERTASASCC 199
++ + +SCC
Sbjct: 191 NQQAQDRKKSSCC 203
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 154/203 (75%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLASKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/189 (69%), Positives = 150/189 (79%), Gaps = 3/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QTL ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNK+DL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM-VLMDRPG 190
V EEAQAYA ENGL FMETSAKTA NVNDIF IA +LP+ + + +G VL D
Sbjct: 142 MVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSEVSSGGAGTRVLNDADA 201
Query: 191 ERTASASCC 199
R S+SCC
Sbjct: 202 PR--SSSCC 208
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 156/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP +
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAI 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 PPRGRGVDLTEPTQPTRS-QCCS 214
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 153/202 (75%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 17 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 76
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 77 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 136
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 137 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQ-NPGAH 195
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T A CCS
Sbjct: 196 STRGRGVDLTEPTQPARGQCCS 217
>gi|328874189|gb|EGG22555.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 150/197 (76%), Gaps = 3/197 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFV+G F+++QESTIGAAF +QT+ +ND TVKFEIWD
Sbjct: 5 NKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYH+LAPMYYRGA AAI+VYDI +Q SFERA KWV+ELQ QG+PN+V+ALAGNK
Sbjct: 65 TAGQERYHTLAPMYYRGAQAAIVVYDIRSQDSFERAIKWVKELQRQGSPNIVIALAGNKL 124
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL RKV EAQ YA+ENGL FMETSAKTA NVN++F EIAK+LP+ P P P L
Sbjct: 125 DLAAKRKVETAEAQQYAEENGLLFMETSAKTAQNVNELFVEIAKKLPKT-PNPRPGSGRL 183
Query: 186 MDRPGERT--ASASCCS 200
P E CCS
Sbjct: 184 PIPPIENNNQRKKPCCS 200
>gi|54020962|ref|NP_001005723.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49522606|gb|AAH75323.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 150/194 (77%), Gaps = 6/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+AL+GNKADL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APNPSGMVLM 186
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P AP S V +
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKTEPQNTSGAPGRSRGVDL 201
Query: 187 DRPGERTASASCCS 200
++ S CCS
Sbjct: 202 HEQTQQNKS-QCCS 214
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 154/202 (76%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T A + CCS
Sbjct: 193 SARGRGVDLTEPAQPARSQCCS 214
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 154/202 (76%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T A + CCS
Sbjct: 193 SARGRGVDLTEPAQPARSQCCS 214
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 156/204 (76%), Gaps = 9/204 (4%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-- 181
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 182 -----GMVLMDRPGERTASASCCS 200
G V + P + T + CCS
Sbjct: 193 SARGRGGVDLTEPTQPTRN-QCCS 215
>gi|225713422|gb|ACO12557.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290462345|gb|ADD24220.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290561497|gb|ADD38149.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
Length = 216
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/168 (74%), Positives = 141/168 (83%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYD+TNQ SF RAK WV+ELQ Q +PN+V+ALAGNKADL R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADLNTKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
V EEAQ YA+ENGL FMETSAKTA NVND+F EIAK+LP+ + N
Sbjct: 143 LVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKLPKDGDSSN 190
>gi|72165047|ref|XP_783878.1| PREDICTED: ras-related protein Rab-5B-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/194 (68%), Positives = 150/194 (77%), Gaps = 6/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQETFGRAKTWVKELQRQASPNIVIALAGNKADLANKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
V EEAQAYA+EN L FMETSAKTA NVNDIF IAK+LP+ P SG +R
Sbjct: 141 MVEFEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNDQVGGPTSGQRGTNRGV 200
Query: 191 ERT-----ASASCC 199
+ T +S CC
Sbjct: 201 DLTESNQQSSGGCC 214
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 STRGRGVDLTEPTQPTRS-QCCS 214
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 154/202 (76%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T + + CCS
Sbjct: 193 SARGRGVDLTEHTLPSRSQCCS 214
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|387861356|gb|AFK08607.1| Rab GTPase [Litopenaeus vannamei]
Length = 210
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 128/190 (67%), Positives = 148/190 (77%), Gaps = 2/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 80 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKADLANKR 139
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP--APNPSGMVLMDRP 189
V EEAQ YA+EN L FMETSAKTA NVNDIF IAK+LP+ + +P G V +
Sbjct: 140 MVEYEEAQTYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKSDSTASGSPRGDVSLSNN 199
Query: 190 GERTASASCC 199
+A CC
Sbjct: 200 QPAQGTAGCC 209
>gi|443707017|gb|ELU02811.1| hypothetical protein CAPTEDRAFT_227582 [Capitella teleta]
Length = 210
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/189 (68%), Positives = 147/189 (77%), Gaps = 1/189 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVRELQRQASPNIVIALAGNKADLANKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPNPSGMVLMDRPG 190
V EEAQAYA+EN L FMETSAKTA NVNDIF IAK+LP+ Q S +D
Sbjct: 141 MVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEQAGQQQSRQRGVDLSQ 200
Query: 191 ERTASASCC 199
E S CC
Sbjct: 201 ENQPSGGCC 209
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 13 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 72
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 73 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 132
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 133 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 191
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 192 SARGRGVDLTEPTQPTRS-QCCS 213
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 154/202 (76%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T A + CCS
Sbjct: 193 SARGRGVDLTEPAQPARSQCCS 214
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 13 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 72
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 73 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 132
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 133 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 191
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 192 SARGRGVDLTEPTQPTRS-QCCS 213
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 152/201 (75%), Gaps = 7/201 (3%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRF KGQF EFQESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 31 NKTCQFKLVLLGESAVGKSSLVLRFAKGQFHEFQESTIGAAFLTQTVCMDDMTVKFEIWD 90
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYR A AAI+VYDITNQ SF +AK WV ELQ Q PN+V+ALAGNKA
Sbjct: 91 TAGQERYQSLAPMYYRAARAAIVVYDITNQKSFTKAKNWVNELQRQALPNIVIALAGNKA 150
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SG-- 182
DL +RKV EAQAYA+ENGL FMETSAKTA NVNDIF+ IAK LP+ + A SG
Sbjct: 151 DLASSRKVEFNEAQAYAEENGLLFMETSAKTAMNVNDIFWAIAKELPKTEAASGGLSGAG 210
Query: 183 --MVLMDRPGER--TASASCC 199
+V + + +R TA SCC
Sbjct: 211 KQVVDLSKSDQRGGTAMGSCC 231
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 154/202 (76%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T A + CCS
Sbjct: 193 SARGRGVDLTEPAQPARSQCCS 214
>gi|348513153|ref|XP_003444107.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 154/202 (76%), Gaps = 8/202 (3%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP------ 178
ADL + R V ++AQ+YA +N L FMETSAKT+ NVN+IF IAKRLP+ +P P
Sbjct: 136 ADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKNEPQPAGANTG 195
Query: 179 NPSGMVLMDRPGERTASASCCS 200
G+ L + + A A CCS
Sbjct: 196 RSRGVDLTE--AAQPAKAPCCS 215
>gi|432883290|ref|XP_004074250.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 156/202 (77%), Gaps = 8/202 (3%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-APNPS-- 181
ADL + R V ++AQ+YA +N L FMETSAKT+ NVN+IF IAKRLP+ +P AP +
Sbjct: 136 ADLANKRAVEFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAPGATSG 195
Query: 182 ---GMVLMDRPGERTASASCCS 200
G+ L + + A A CCS
Sbjct: 196 RNRGVDLTE--AAQPAKAPCCS 215
>gi|157117083|ref|XP_001658691.1| rab5 [Aedes aegypti]
gi|108876182|gb|EAT40407.1| AAEL007845-PA [Aedes aegypti]
Length = 214
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 151/200 (75%), Gaps = 7/200 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 18 TQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEI 77
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 78 WDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGN 137
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL++ R V EEA+ YA ENGL FMETSAKTA NVNDIF I K+LP+ + A +
Sbjct: 138 KADLVNKRMVDYEEAKQYADENGLLFMETSAKTAVNVNDIFLAIGKKLPKNEGAGQQQNI 197
Query: 184 VLMDRPGERTAS---ASCCS 200
RP + S + CCS
Sbjct: 198 ----RPTQNEQSRQNSGCCS 213
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/204 (65%), Positives = 157/204 (76%), Gaps = 10/204 (4%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP G+
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NP-GI 191
Query: 184 -------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 192 NCTRGRGVDLTEPTQPTRS-QCCS 214
>gi|47210398|emb|CAF91320.1| unnamed protein product [Tetraodon nigroviridis]
Length = 210
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 151/205 (73%), Gaps = 6/205 (2%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
AT NK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKF
Sbjct: 5 ATVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKF 64
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 65 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALA 124
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP--APN 179
GNKAD+ + R V +EAQ YA +N L FMETSAKTA NVN+IF IAK+LP+ P P
Sbjct: 125 GNKADITNKRAVEHQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDPQVGPG 184
Query: 180 PSGMVLMDRPGERTA----SASCCS 200
G V + TA S CCS
Sbjct: 185 QGGRVRTGVDLQETAPQGRSGQCCS 209
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 153/202 (75%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T A + CCS
Sbjct: 193 SARGRGVDLTEPAQPARSQCCS 214
>gi|297853616|ref|XP_002894689.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340531|gb|EFH70948.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/135 (92%), Positives = 130/135 (96%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK+INA LVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MAAAGNKSINANLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASFERAKKWVQELQAQ NPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQDNPNMVMAL 120
Query: 121 AGNKADLLDARKVTA 135
AGNK+DLLDARKVTA
Sbjct: 121 AGNKSDLLDARKVTA 135
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T + CCS
Sbjct: 193 SARGRGVDLTEPTQPTRN-QCCS 214
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 215
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 154/203 (75%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF I K+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 154/201 (76%), Gaps = 6/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 15 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNK 134
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL + R V ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P + V
Sbjct: 135 ADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNTGANSV 194
Query: 185 L-----MDRPGERTASASCCS 200
+ P ++T S CCS
Sbjct: 195 RGRGVDLTEPTQQTKS-QCCS 214
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 152/201 (75%), Gaps = 6/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL R V +EAQAYA +N L FMETSAKT+ NVN+IF IAK+LP+ +P S +
Sbjct: 136 ADLSTKRAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQAGASNTI 195
Query: 185 LMDRPGERTASA-----SCCS 200
R + T +A CCS
Sbjct: 196 -RGRGVDLTETAQPTKSQCCS 215
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 155/201 (77%), Gaps = 6/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D T+KFEIW
Sbjct: 15 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTIKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNK 134
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP----APNP 180
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P A +
Sbjct: 135 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNEPQNTGANSS 194
Query: 181 SGM-VLMDRPGERTASASCCS 200
G V + P + T S CCS
Sbjct: 195 RGRGVDLTEPTQPTKS-QCCS 214
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 152/201 (75%), Gaps = 6/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL R V +EAQAYA +N L FMETSAKT+ NVN+IF IAK+LP+ +P S +
Sbjct: 136 ADLASKRAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQAGGSNTI 195
Query: 185 LMDRPGERTASA-----SCCS 200
R + T +A CCS
Sbjct: 196 -RGRGVDLTETAQPTKSQCCS 215
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 149/198 (75%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 20 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 79
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RAK WV+EL Q +PN+V+ALA
Sbjct: 80 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALA 139
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNKADL + R V +EA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ A N
Sbjct: 140 GNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQG 199
Query: 182 GMVLMDRPGERTASASCC 199
G + + + +CC
Sbjct: 200 GSIRPNGNETNRPTNNCC 217
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 15 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNK 134
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R V +EAQAYA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 135 ADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEP 186
>gi|391334640|ref|XP_003741710.1| PREDICTED: ras-related protein Rab-5C-like [Metaseiulus
occidentalis]
Length = 210
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/197 (66%), Positives = 148/197 (75%), Gaps = 2/197 (1%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TAGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYD+TN +F RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDLTNPDTFSRAKTWVKELQRQASPNIVIALAGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL R V EAQAYA EN L FMETSAKTATNVNDIF IAK+LP+ A N G
Sbjct: 134 KADLASKRAVETAEAQAYADENQLLFMETSAKTATNVNDIFLAIAKKLPK-NDAANQQGQ 192
Query: 184 VL-MDRPGERTASASCC 199
L + + E S CC
Sbjct: 193 RLNVAQSAESNQSGGCC 209
>gi|281206811|gb|EFA80995.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 219
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 147/190 (77%), Gaps = 3/190 (1%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
LVLLG+ GKSSLVLRFV+G F+++QESTIGAAF +QT+ +ND TVKFEIWDTAGQERY
Sbjct: 30 LVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQERY 89
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
H+LAPMYYRGA AAI+VYDI +Q SFERA KWV+ELQ QG+PN+V+ALAGNK DL RK
Sbjct: 90 HTLAPMYYRGAQAAIVVYDIRSQDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRK 149
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGER 192
V EAQ YA+ENGL FMETSAKTA NVN++F EIAK+LP+ P P P L P +
Sbjct: 150 VETSEAQTYAEENGLLFMETSAKTAQNVNELFVEIAKKLPKT-PNPRPGSGRLPISPIDN 208
Query: 193 TASAS--CCS 200
CCS
Sbjct: 209 NPQKKKPCCS 218
>gi|327276980|ref|XP_003223244.1| PREDICTED: ras-related protein Rab-5B-like [Anolis carolinensis]
Length = 215
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/194 (65%), Positives = 149/194 (76%), Gaps = 6/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM-----VLM 186
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P M V +
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTGGAMGRNRGVDL 201
Query: 187 DRPGERTASASCCS 200
++ S CCS
Sbjct: 202 HEQSQQNKS-QCCS 214
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 154/202 (76%), Gaps = 6/202 (2%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+EL+ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELRRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 VLMDRPGERT-----ASASCCS 200
R + T A + CCS
Sbjct: 193 SARGRGVDLTEPAQPARSQCCS 214
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 151/197 (76%), Gaps = 1/197 (0%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 19 TQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEI 78
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 79 WDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGN 138
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL ++R V EEA+ YA +NGL FMETSAKTA NVNDIF IAK+LP+ + P
Sbjct: 139 KADLANSRVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIAKKLPKNE-GTGPQQN 197
Query: 184 VLMDRPGERTASASCCS 200
+ + + ++ CCS
Sbjct: 198 IRPTQNEQSRQNSGCCS 214
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 150/199 (75%), Gaps = 4/199 (2%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 20 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 79
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RAK WV+EL Q +PN+V+ALA
Sbjct: 80 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALA 139
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNKADL + R V +EA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ P
Sbjct: 140 GNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDNNP--- 196
Query: 182 GMVLMDRPGERTASA-SCC 199
G V+ E T + +CC
Sbjct: 197 GTVIKPNGNESTQTTNNCC 215
>gi|297841033|ref|XP_002888398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334239|gb|EFH64657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 144
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/132 (93%), Positives = 129/132 (97%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK+INAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARK 132
AGNK+DLLDARK
Sbjct: 121 AGNKSDLLDARK 132
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 222
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 154/205 (75%), Gaps = 7/205 (3%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A NK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKF
Sbjct: 15 AAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKF 74
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F+RAK WV+ELQ Q +PN+V+ALA
Sbjct: 75 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFDRAKNWVKELQRQASPNIVIALA 134
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP----- 176
GNKAD+ + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 135 GNKADIANKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGTAG 194
Query: 177 --APNPSGMVLMDRPGERTASASCC 199
+G+ L + ++S+ CC
Sbjct: 195 QGGRTRTGVDLEQTNPQGSSSSRCC 219
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIG+ F +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGSCFSTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA++N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYAEDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|387017972|gb|AFJ51104.1| ras-related protein Rab-5B-like [Crotalus adamanteus]
Length = 214
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/194 (65%), Positives = 151/194 (77%), Gaps = 7/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APNPSGMVLM 186
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSIGGAVGRRGVDLH 201
Query: 187 DRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 EQSQQN--KSQCCS 213
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 15 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNK 134
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R V +EAQAYA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 135 ADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEP 186
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 15 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNK 134
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R V +EAQAYA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 135 ADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEP 186
>gi|427786891|gb|JAA58897.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 218
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 150/198 (75%), Gaps = 13/198 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP----------S 181
V EEAQAY++ENGL FMETSAKTA NVNDIF IAK+LP+ + +
Sbjct: 143 AVELEEAQAYSEENGLLFMETSAKTAMNVNDIFLAIAKKLPKTEQGTSAVGGGASGQGRR 202
Query: 182 GMVLMDRPGERTASASCC 199
G+ L + P + S CC
Sbjct: 203 GVDLSEHPQQ---SGGCC 217
>gi|149756750|ref|XP_001504847.1| PREDICTED: ras-related protein Rab-5B-like [Equus caballus]
Length = 215
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 127/194 (65%), Positives = 149/194 (76%), Gaps = 6/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDR--- 188
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P NP G R
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ-NPGGAAGRSRGVD 200
Query: 189 --PGERTASASCCS 200
+ + CCS
Sbjct: 201 LHEQSQQNKSQCCS 214
>gi|121583768|ref|NP_001073405.1| ras-related protein Rab-5B [Rattus norvegicus]
gi|120537414|gb|AAI29102.1| RAB5B, member RAS oncogene family [Rattus norvegicus]
gi|149029654|gb|EDL84825.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 215
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/194 (65%), Positives = 149/194 (76%), Gaps = 6/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P NP G R +
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ-NPGGAAGRSRGVD 200
Query: 192 RTASA-----SCCS 200
A CCS
Sbjct: 201 LHEQAQQNKSQCCS 214
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 123/168 (73%), Positives = 141/168 (83%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 16 NKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITNQ SF +AK WV+ELQ Q +PN+V+AL+GNKA
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R V EEAQAYA++N L FMETSAKTA NVNDIF IAK+LP+
Sbjct: 136 DLANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 15 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNK 134
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R V +EAQAYA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 135 ADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEP 186
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 145/175 (82%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QTL ++D TVKFEI
Sbjct: 15 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEI 74
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGN 134
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
KADL + R + ++AQ+YA +N L FMETSAKT+ NV++IF IAK+LP+ +P P
Sbjct: 135 KADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKLPKNEPQP 189
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 152/202 (75%), Gaps = 8/202 (3%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 295 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 354
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 355 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 414
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--- 181
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P P
Sbjct: 415 ADLASKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGAPG 474
Query: 182 ---GMVLMDRPGERTASASCCS 200
G+ L + T+ + CCS
Sbjct: 475 RNRGVDLQE--NSPTSRSQCCS 494
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 155/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQE YHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQEGYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP--- 180
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 181 ---SGMVLMDRPGERTASASCCS 200
G V + P + T + CCS
Sbjct: 193 SARGGGVDLTEPTQPTRN-QCCS 214
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 123/168 (73%), Positives = 141/168 (83%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 16 NKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITNQ SF +AK WV+ELQ Q +PN+V+AL+GNKA
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R V EEAQAYA++N L FMETSAKTA NVNDIF IAK+LP+
Sbjct: 136 DLANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 147/193 (76%), Gaps = 1/193 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+AV+D TVKFEIWDT
Sbjct: 12 KSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVAVDDVTVKFEIWDT 71
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERYHSLAPMYYRGA AAI+VYDITN +F+RA+ WV+ELQ Q NPN+V+ALAGNKAD
Sbjct: 72 AGQERYHSLAPMYYRGAQAAIVVYDITNADTFQRARSWVKELQRQANPNIVIALAGNKAD 131
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L ++V EA+AYA+ENGL FMETSAK A NV +IF IAK+LP+ P P G L
Sbjct: 132 LASKQQVDTNEARAYAEENGLLFMETSAKNAMNVTEIFMAIAKKLPK-NTQPGPRGDTLK 190
Query: 187 DRPGERTASASCC 199
+ CC
Sbjct: 191 VADDGKKQGGGCC 203
>gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella]
Length = 215
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 150/195 (76%), Gaps = 9/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+AL+GNKADL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALSGNKADLSSKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-------QPAPNPSGMV 184
V EEAQ YA+ENGL FMETSAKTA NVNDIF IAK+LP+ Q A G+
Sbjct: 142 MVDYEEAQTYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKSDNTQGGPQAAQRQRGVD 201
Query: 185 LMDRPGERTASASCC 199
L + + +S+ CC
Sbjct: 202 LQET--NQQSSSGCC 214
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 143/175 (81%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QTL ++D TVKF
Sbjct: 14 APVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKF 73
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 74 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALA 133
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
GNKADL + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 134 GNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEP 188
>gi|189237939|ref|XP_001813105.1| PREDICTED: similar to small GTP binding protein RAB5 [Tribolium
castaneum]
gi|270008253|gb|EFA04701.1| Rab-protein 5 [Tribolium castaneum]
Length = 215
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 151/202 (74%), Gaps = 4/202 (1%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKF
Sbjct: 13 GSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF 72
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 73 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALA 132
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--- 178
GNK DL + R V EEAQ YA ENGL FMETSAKTA NVNDIF IAK+LP+ + A
Sbjct: 133 GNKQDLANKRMVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQATAQG 192
Query: 179 -NPSGMVLMDRPGERTASASCC 199
+ G L + A+ +CC
Sbjct: 193 ASGQGRRLAEGDTGAKAAGNCC 214
>gi|25304086|gb|AAH40143.1| RAB5B protein, partial [Homo sapiens]
Length = 267
Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 74 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 133
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 134 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 193
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 194 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDL 253
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 254 HEQSQQN--KSQCCS 266
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 154/203 (75%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA A I+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FM+TSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMKTSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 193 SARGRGVDLTEPTQPTRS-QCCS 214
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QTL ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R V ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 136 ADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEP 187
>gi|20072723|gb|AAH27378.1| Rab5c protein, partial [Mus musculus]
Length = 203
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 3 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 62
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 63 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 122
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 123 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 182
Query: 180 PS-GMVLMD-RPGERTASASCCS 200
+ G+ L + P R+ CCS
Sbjct: 183 RTRGVDLQESNPASRS---QCCS 202
>gi|308807024|ref|XP_003080823.1| GTP binding protein (ISS) [Ostreococcus tauri]
gi|116059284|emb|CAL54991.1| GTP binding protein (ISS), partial [Ostreococcus tauri]
Length = 200
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/198 (68%), Positives = 161/198 (81%), Gaps = 2/198 (1%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A+ + AKLVLLGD+GAGKSSLVLRFVKGQF E+QESTIGAAF +QT+ V+D T+KF
Sbjct: 5 ASAASVTTQAKLVLLGDMGAGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCVDDRTIKF 64
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAIIVYDI +Q+SF RAK WV+ELQ QGN ++VMALA
Sbjct: 65 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDIQSQSSFARAKSWVRELQKQGNASLVMALA 124
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNK D+ + R+V AEEA+AYA ENGLFFMETSAK A NV ++F+EIA +LPR PAP
Sbjct: 125 GNKCDMEEKREVQAEEAEAYAAENGLFFMETSAKAAVNVTELFHEIAVKLPRA-PAPTAP 183
Query: 182 GMVLMDRPGERTASASCC 199
G+VL ++ ++ CC
Sbjct: 184 GVVLTNQ-NRAPKNSQCC 200
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 153/202 (75%), Gaps = 8/202 (3%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--- 181
ADL R V +EAQAYA++N L FMETSAKTA NVN+IF IAK+LP+ +P P
Sbjct: 136 ADLGSKRAVDFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGAPG 195
Query: 182 ---GMVLMDRPGERTASASCCS 200
G+ L + T+ + CCS
Sbjct: 196 RNRGVDLQEN--SPTSRSQCCS 215
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QTL ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R V ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 136 ADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEP 187
>gi|388520843|gb|AFK48483.1| unknown [Lotus japonicus]
Length = 210
Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 154/192 (80%), Gaps = 1/192 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK I AKLVLLGD+G GK+SL LRFVKGQF QE T+GAAFF+Q L++++ATVK
Sbjct: 1 MARPGNKIIQAKLVLLGDMGTGKTSLALRFVKGQFYPNQEPTVGAAFFTQILSLSEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAAI+VYDI++ +F +A+KWVQELQ GN +VMAL
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDISSIDTFVQAEKWVQELQRHGNQKLVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
A NK+DL R+V EE + +AQENG+F+METSAKTA N+N++FYEIAKRL R P P
Sbjct: 121 AANKSDLEPKREVETEEGEKFAQENGMFYMETSAKTAENINELFYEIAKRLARALPL-KP 179
Query: 181 SGMVLMDRPGER 192
SG+ L + +R
Sbjct: 180 SGISLNNDNQDR 191
>gi|50979062|ref|NP_001003261.1| ras-related protein Rab-5C [Canis lupus familiaris]
gi|1710027|sp|P51147.1|RAB5C_CANFA RecName: Full=Ras-related protein Rab-5C
gi|415377|emb|CAA81626.1| Rab5c protein [Canis lupus familiaris]
Length = 216
Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 133/200 (66%), Positives = 152/200 (76%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP---APNPS 181
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P A PS
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPS 195
Query: 182 GMVLMDRPGERTASAS-CCS 200
+D AS S CCS
Sbjct: 196 RNRGVDLQENSPASRSQCCS 215
>gi|410911128|ref|XP_003969042.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/202 (63%), Positives = 153/202 (75%), Gaps = 8/202 (3%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------AP 178
ADL R V ++AQ+YA +N L FMETSAKT+ NVN+IF IAKRLP+ +P +
Sbjct: 136 ADLASKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSEPQAAGGSSG 195
Query: 179 NPSGMVLMDRPGERTASASCCS 200
G+ L + + A A CCS
Sbjct: 196 RNRGVDLTE--AAQPAKAPCCS 215
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 156/203 (76%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 15 TGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQRQASPNIVIALAGN 134
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-- 181
KADL + R + ++AQ+YA +N L FMETSAKT+ NVN++F IAK+LP+ +P +
Sbjct: 135 KADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEMFMAIAKKLPKNEPQAEGANS 194
Query: 182 ----GMVLMDRPGERTASASCCS 200
G+ L + + AS SCCS
Sbjct: 195 GRNRGVDLTE--AAQPASRSCCS 215
>gi|301773541|ref|XP_002922175.1| PREDICTED: ras-related protein Rab-5C-like [Ailuropoda melanoleuca]
gi|281344533|gb|EFB20117.1| hypothetical protein PANDA_011151 [Ailuropoda melanoleuca]
Length = 216
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 133/200 (66%), Positives = 152/200 (76%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP---APNPS 181
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P A PS
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPS 195
Query: 182 GMVLMDRPGERTASAS-CCS 200
+D AS S CCS
Sbjct: 196 RNRGVDLQENNPASRSQCCS 215
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/200 (64%), Positives = 150/200 (75%), Gaps = 3/200 (1%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 23 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 82
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RA WV+EL Q +PN+V+ALA
Sbjct: 83 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRATTWVKELHKQASPNIVIALA 142
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-- 179
GNKADL + R V EEA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ A N
Sbjct: 143 GNKADLSNIRVVEYEEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQA 202
Query: 180 PSGMVLMDRPGERTASASCC 199
+G L + R + +CC
Sbjct: 203 QAGRRLNENENNRQTN-NCC 221
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 150/199 (75%), Gaps = 4/199 (2%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 20 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 79
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RAK WV+EL Q +PN+V+ALA
Sbjct: 80 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALA 139
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNKADL + R V +EA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ N
Sbjct: 140 GNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPK---NDNNQ 196
Query: 182 GMVLMDRPGERTASA-SCC 199
G V+ E T + +CC
Sbjct: 197 GSVIKPNGNEPTQTTNNCC 215
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 150/195 (76%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQTQQN--KSQCCS 214
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 150/199 (75%), Gaps = 4/199 (2%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 20 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 79
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RAK WV+EL Q +PN+V+ALA
Sbjct: 80 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALA 139
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNKADL + R V +EA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ N
Sbjct: 140 GNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPK---NDNNQ 196
Query: 182 GMVLMDRPGERTASA-SCC 199
G V+ E T + +CC
Sbjct: 197 GSVIKPNGNEPTQTTNNCC 215
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 152/203 (74%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP--APNPSG 182
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP G
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGAPG 195
Query: 183 M-----VLMDRPGERTASASCCS 200
+ + P R+ CCS
Sbjct: 196 RNRGVDLQENNPASRS---QCCS 215
>gi|403273236|ref|XP_003928426.1| PREDICTED: ras-related protein Rab-5B-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAHAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAACRSQGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 154/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA++N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 196 RNRGVDLQENNPASRS---QCCS 215
>gi|402886385|ref|XP_003906610.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Papio anubis]
gi|402886387|ref|XP_003906611.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Papio anubis]
gi|355564343|gb|EHH20843.1| Ras-related protein Rab-5B [Macaca mulatta]
gi|355786201|gb|EHH66384.1| Ras-related protein Rab-5B [Macaca fascicularis]
gi|380787145|gb|AFE65448.1| ras-related protein Rab-5B isoform 1 [Macaca mulatta]
gi|383410993|gb|AFH28710.1| ras-related protein Rab-5B [Macaca mulatta]
gi|384940030|gb|AFI33620.1| ras-related protein Rab-5B [Macaca mulatta]
Length = 215
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGTACRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|301760474|ref|XP_002916104.1| PREDICTED: ras-related protein Rab-5B-like [Ailuropoda melanoleuca]
gi|281353251|gb|EFB28835.1| hypothetical protein PANDA_004070 [Ailuropoda melanoleuca]
Length = 215
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAACRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|112292957|dbj|BAF02856.1| Rab5B [Mus musculus]
Length = 229
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 36 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 95
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 96 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 155
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 156 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDL 215
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 216 HEQSQQN--KSQCCS 228
>gi|350537173|ref|NP_001232748.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128640|gb|ACH45138.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 216
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/200 (63%), Positives = 152/200 (76%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG-- 182
ADL + R V ++AQ YA +N L FMETSAKTA NVN+IF IAK+LP+ +P P G
Sbjct: 136 ADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPG 195
Query: 183 --MVLMDRPGERTASASCCS 200
V+ + + + + CCS
Sbjct: 196 RNRVVDLQESSQPSRSQCCS 215
>gi|344285066|ref|XP_003414284.1| PREDICTED: ras-related protein Rab-5C-like [Loxodonta africana]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 154/204 (75%), Gaps = 10/204 (4%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
+GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 15 SGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGN 134
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----AP 178
KADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 135 KADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAP 194
Query: 179 NPSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 195 GRNRGVDLQENNPASRS---QCCS 215
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 152/204 (74%), Gaps = 12/204 (5%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 49 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 108
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 109 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 168
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P N +G
Sbjct: 169 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ-NATGAP 227
Query: 185 LMDR--------PGERTASASCCS 200
+R P R+ CCS
Sbjct: 228 GRNRGVDLQENNPASRS---QCCS 248
>gi|355714962|gb|AES05178.1| RAB5B, member RAS oncoprotein family [Mustela putorius furo]
Length = 246
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 54 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 113
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 114 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 173
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 174 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGAAAGRSRGVDL 233
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 234 HEQSQQN--KSQCCS 246
>gi|90079481|dbj|BAE89420.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFVRAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGTACRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|113866024|ref|NP_077776.2| ras-related protein Rab-5C [Mus musculus]
gi|38258917|sp|P35278.2|RAB5C_MOUSE RecName: Full=Ras-related protein Rab-5C
gi|18606182|gb|AAH23027.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|20988213|gb|AAH29678.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|74186351|dbj|BAE42948.1| unnamed protein product [Mus musculus]
gi|74195703|dbj|BAE39656.1| unnamed protein product [Mus musculus]
gi|74204684|dbj|BAE35411.1| unnamed protein product [Mus musculus]
gi|112292959|dbj|BAF02857.1| Rab5C [Mus musculus]
gi|148670588|gb|EDL02535.1| RAB5C, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 151/200 (75%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP---APNPS 181
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P A P
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 182 GMVLMDRPGERTASAS-CCS 200
+D AS S CCS
Sbjct: 196 RTRGVDLQESNPASRSQCCS 215
>gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 180 PS-GMVLMDR-PGERTASASCCS 200
+ G+ L + P R+ CCS
Sbjct: 196 RTRGVDLQESIPASRS---QCCS 215
>gi|431914002|gb|ELK15264.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 256
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 63 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 122
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 123 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 182
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 183 VVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAACRSRGVDL 242
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 243 HEQSQQN--KSQCCS 255
>gi|403304464|ref|XP_003942816.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Saimiri
boliviensis boliviensis]
gi|403304466|ref|XP_003942817.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Saimiri
boliviensis boliviensis]
gi|403304468|ref|XP_003942818.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 155/204 (75%), Gaps = 10/204 (4%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
+GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 15 SGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGN 134
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----AP 178
KADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 135 KADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAP 194
Query: 179 NPS-GMVLMD-RPGERTASASCCS 200
+ G+ L + P R+ CCS
Sbjct: 195 GRNRGVDLQESNPASRS---QCCS 215
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 141/168 (83%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITNQ SF +AK WV+ELQ Q +PN+V+AL+GNKA
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R V EEAQAYA++N L FMETSAKTA NVNDIF IAK+LP+
Sbjct: 136 DLANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
>gi|395540530|ref|XP_003772206.1| PREDICTED: ras-related protein Rab-5B [Sarcophilus harrisii]
Length = 215
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNMGGTAGRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|351703636|gb|EHB06555.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 215
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVDYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGVAGRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 148/198 (74%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 21 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 80
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RAK WV+EL Q +PN+V+ALA
Sbjct: 81 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALA 140
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNKADL + R V +EA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ A N
Sbjct: 141 GNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQG 200
Query: 182 GMVLMDRPGERTASASCC 199
+ + + +CC
Sbjct: 201 TSIRPNGNETNRPTNNCC 218
>gi|4506371|ref|NP_002859.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|28916687|ref|NP_803130.1| ras-related protein Rab-5B isoform 1 [Mus musculus]
gi|197099504|ref|NP_001125512.1| ras-related protein Rab-5B [Pongo abelii]
gi|354725902|ref|NP_001238965.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|73968313|ref|XP_531627.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Canis lupus
familiaris]
gi|291389411|ref|XP_002711110.1| PREDICTED: RAB5B, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|332207599|ref|XP_003252883.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Nomascus
leucogenys]
gi|332839019|ref|XP_003313654.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan troglodytes]
gi|344266193|ref|XP_003405165.1| PREDICTED: ras-related protein Rab-5B-like [Loxodonta africana]
gi|348580964|ref|XP_003476248.1| PREDICTED: ras-related protein Rab-5B-like [Cavia porcellus]
gi|390467774|ref|XP_002752642.2| PREDICTED: ras-related protein Rab-5B [Callithrix jacchus]
gi|397509152|ref|XP_003825000.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan paniscus]
gi|397509154|ref|XP_003825001.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan paniscus]
gi|410046526|ref|XP_003952209.1| PREDICTED: ras-related protein Rab-5B [Pan troglodytes]
gi|410964757|ref|XP_003988919.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Felis catus]
gi|426224979|ref|XP_004006646.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Ovis aries]
gi|46577637|sp|P61020.1|RAB5B_HUMAN RecName: Full=Ras-related protein Rab-5B
gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B
gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B
gi|20379050|gb|AAM21085.1|AF498937_1 small GTP binding protein RAB5B [Homo sapiens]
gi|35839|emb|CAA38653.1| ras related protein Rab5b [Homo sapiens]
gi|871435|emb|CAA59016.1| rab5b [Mus musculus]
gi|26349073|dbj|BAC38176.1| unnamed protein product [Mus musculus]
gi|31873318|emb|CAD97650.1| hypothetical protein [Homo sapiens]
gi|45708723|gb|AAH32740.1| RAB5B protein [Homo sapiens]
gi|49456341|emb|CAG46491.1| RAB5B [Homo sapiens]
gi|55728309|emb|CAH90899.1| hypothetical protein [Pongo abelii]
gi|117645878|emb|CAL38406.1| hypothetical protein [synthetic construct]
gi|119617268|gb|EAW96862.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617269|gb|EAW96863.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|127797687|gb|AAH50558.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798430|gb|AAH56422.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798643|gb|AAH65298.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|148692650|gb|EDL24597.1| RAB5B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|158258631|dbj|BAF85286.1| unnamed protein product [Homo sapiens]
gi|187952647|gb|AAI37575.1| RAB5B, member RAS oncogene family [Mus musculus]
gi|208967242|dbj|BAG73635.1| RAB5B, member RAS oncogene family [synthetic construct]
gi|223459814|gb|AAI37576.1| Rab5b protein [Mus musculus]
gi|410217062|gb|JAA05750.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410268074|gb|JAA22003.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410299464|gb|JAA28332.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410340889|gb|JAA39391.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|444518222|gb|ELV12033.1| Ras-related protein Rab-5B [Tupaia chinensis]
Length = 215
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|291237556|ref|XP_002738699.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 215
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 141/170 (82%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 13 TQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 72
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYD+TNQ +F RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 73 WDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDTFARAKTWVKELQRQASPNIVIALAGN 132
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
KADL + R V EEAQAYA++N L FMETSAKTA NVNDIF IAK+LP+
Sbjct: 133 KADLANKRMVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKLPK 182
>gi|297849916|ref|XP_002892839.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338681|gb|EFH69098.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 144
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/132 (92%), Positives = 128/132 (96%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK+INAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLA+NDATVK
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAINDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRG AAAIIV+D+TNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGVAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARK 132
AGNK+DLLDARK
Sbjct: 121 AGNKSDLLDARK 132
>gi|329664122|ref|NP_001193120.1| ras-related protein Rab-5B [Bos taurus]
gi|296487563|tpg|DAA29676.1| TPA: RAB5B, member RAS oncogene family-like [Bos taurus]
Length = 215
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRTRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 140/167 (83%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+AL+GNKADL R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
V E+AQ+YA++NGL FMETSAKTA NVNDIF IAK+LP+ P
Sbjct: 143 MVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIAKKLPKSDNTP 189
>gi|60826707|gb|AAX36768.1| RAB5B member RAS oncogene family [synthetic construct]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|291406117|ref|XP_002719438.1| PREDICTED: RAB5C, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQSAAGAPG 195
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 196 RNRGVDLQENNPASRS---QCCS 215
>gi|149723790|ref|XP_001495006.1| PREDICTED: ras-related protein Rab-5C-like [Equus caballus]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 196 RNRGVDLQENNPASRS---QCCS 215
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 148/198 (74%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 21 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 80
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RAK WV+EL Q +PN+V+ALA
Sbjct: 81 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALA 140
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNKADL + R V +EA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ A N
Sbjct: 141 GNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQG 200
Query: 182 GMVLMDRPGERTASASCC 199
+ + + +CC
Sbjct: 201 TSIRPNGNETNRPTNNCC 218
>gi|440897250|gb|ELR48982.1| Ras-related protein Rab-5B, partial [Bos grunniens mutus]
Length = 227
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 34 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 93
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 94 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 153
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 154 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRTRGVDL 213
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 214 HEQSQQN--KSQCCS 226
>gi|426348257|ref|XP_004041754.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Gorilla gorilla
gorilla]
Length = 286
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 152/204 (74%), Gaps = 12/204 (5%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 86 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 145
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 146 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 205
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P N +G
Sbjct: 206 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ-NATGAP 264
Query: 185 LMDR--------PGERTASASCCS 200
+R P R+ CCS
Sbjct: 265 GRNRGVDLQENNPASRS---QCCS 285
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 49 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 108
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 109 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 168
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 169 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 228
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 229 RNRGVDLQENNPASRS---QCCS 248
>gi|45383121|ref|NP_989856.1| ras-related protein Rab-5C [Gallus gallus]
gi|326934183|ref|XP_003213173.1| PREDICTED: ras-related protein Rab-5C-like [Meleagris gallopavo]
gi|82246551|sp|Q98932.1|RAB5C_CHICK RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like
protein
gi|1531769|emb|CAA69142.1| rab5C-like protein [Gallus gallus]
gi|449267489|gb|EMC78432.1| Ras-related protein Rab-5C [Columba livia]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/200 (63%), Positives = 151/200 (75%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG-- 182
ADL R V ++AQ YA +N L FMETSAKTA NVN+IF IAK+LP+ +P P G
Sbjct: 136 ADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPG 195
Query: 183 --MVLMDRPGERTASASCCS 200
V+ + + + + CCS
Sbjct: 196 RNRVVDLQESSQPSRSQCCS 215
>gi|395826386|ref|XP_003786399.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Otolemur
garnettii]
gi|395826388|ref|XP_003786400.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Otolemur
garnettii]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 196 RNRGVDLQENNPASRS---QCCS 215
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 195
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 196 RNRGVDLQENNPASRS---QCCS 215
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 151/204 (74%), Gaps = 12/204 (5%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QTL ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P N G
Sbjct: 136 ADLSSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ-NAQGNT 194
Query: 185 LMDR--------PGERTASASCCS 200
+R P R+ CCS
Sbjct: 195 GRNRGVDLQENNPPSRS---QCCS 215
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 152/204 (74%), Gaps = 12/204 (5%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
T+ NK+ KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D VKF
Sbjct: 21 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKF 80
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ SF+RAK WV+EL Q +PN+V+ALA
Sbjct: 81 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALA 140
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-- 179
GNKADL + R V +EA+ YA+ENGL FMETSAKT NVNDIF IAK+LP+ A N
Sbjct: 141 GNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQG 200
Query: 180 ----PSGMVLMDRPGERTASASCC 199
P+G +RP + +CC
Sbjct: 201 TSIRPTG-TETNRP-----TNNCC 218
>gi|432910626|ref|XP_004078445.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 144/173 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
ADL + R + ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +PA
Sbjct: 136 ADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPA 188
>gi|426348255|ref|XP_004041753.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Gorilla gorilla
gorilla]
Length = 249
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 49 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 108
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 109 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 168
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 169 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 228
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 229 RNRGVDLQENNPASRS---QCCS 248
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNVTGAPG 195
Query: 180 PS-GMVLMD-RPGERTASASCCS 200
+ G+ L + P R+ CCS
Sbjct: 196 RNRGVDLQESNPASRS---QCCS 215
>gi|354488169|ref|XP_003506243.1| PREDICTED: ras-related protein Rab-5B-like [Cricetulus griseus]
gi|344256418|gb|EGW12522.1| Ras-related protein Rab-5B [Cricetulus griseus]
Length = 215
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRNRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|347800697|ref|NP_001099310.2| ras-related protein Rab-5C [Rattus norvegicus]
gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norvegicus]
gi|165970759|gb|AAI58857.1| Rab5c protein [Rattus norvegicus]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 154/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 180 PS-GMVLMD-RPGERTASASCCS 200
+ G+ L + P R+ CCS
Sbjct: 196 RNRGVDLQESNPASRS---QCCS 215
>gi|417408967|gb|JAA51011.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 242
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 49 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 108
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 109 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 168
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 169 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDL 228
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 229 HEQSQQN--KSQCCS 241
>gi|335307623|ref|XP_003360910.1| PREDICTED: ras-related protein Rab-5B-like [Sus scrofa]
Length = 215
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein, PIR
Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APN 179
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P AP
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 195
Query: 180 PSGMVLM--DRPGERTASASCCS 200
+ V + + P R+ CCS
Sbjct: 196 RNRGVDLQENNPASRS---QCCS 215
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM- 183
AD+ + R + +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 136 ADIANKRAIDQQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQGGAGTGG 195
Query: 184 -----VLMDRPGERTASASCC 199
V + P + S CC
Sbjct: 196 RTRPGVDLQEPAPQGRSGQCC 216
>gi|47229414|emb|CAF99402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 155/215 (72%), Gaps = 20/215 (9%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKV--------------TAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
ADL R V T ++AQ+YA +N L FMETSAKT+ NVN+IF IAKR
Sbjct: 136 ADLASKRAVDFQVSADELLLGQKTEQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKR 195
Query: 171 LPRVQPAPNPSGMVLMDRPGERT-----ASASCCS 200
LP+ +P G + +R + T A ASCCS
Sbjct: 196 LPKSEPQA-AGGSSVRNRGVDLTEAAQPAKASCCS 229
>gi|410895511|ref|XP_003961243.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 221
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 140/172 (81%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
AT NK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKF
Sbjct: 14 ATVTNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKF 73
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 74 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALA 133
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
GNKAD+ + R V +EAQ YA EN L FMETSAKTA NVN+IF IAK+LP+
Sbjct: 134 GNKADIANKRAVEHQEAQTYADENSLLFMETSAKTAINVNEIFMAIAKKLPK 185
>gi|66824005|ref|XP_645357.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75014117|sp|Q86JP3.1|RAB5A_DICDI RecName: Full=Ras-related protein Rab-5A
gi|60473482|gb|EAL71426.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 149/198 (75%), Gaps = 4/198 (2%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFV+G F+++QESTIGAAF +QT+ +ND TVKFEIWD
Sbjct: 5 NKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYH+LAPMYYRGA AAI+VYDI ++ SFERA KWV+ELQ QG+PN+V+ALAGNK
Sbjct: 65 TAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKL 124
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL RKV EAQ YA+ENGL FMETSAKT+ NVN++F EIAK+LP+ P P +
Sbjct: 125 DLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKT-PTTRPGSGRV 183
Query: 186 MDRP---GERTASASCCS 200
P G CC+
Sbjct: 184 AIAPIDNGNTGKKNKCCN 201
>gi|110590632|pdb|2HEI|A Chain A, Crystal Structure Of Human Rab5b In Complex With Gdp
gi|110590633|pdb|2HEI|B Chain B, Crystal Structure Of Human Rab5b In Complex With Gdp
Length = 179
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/173 (69%), Positives = 143/173 (82%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
+ +K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEI
Sbjct: 2 SASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEI 61
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGN
Sbjct: 62 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGN 121
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
KADL + R V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P
Sbjct: 122 KADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEP 174
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 141/172 (81%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 136 ADLSSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
>gi|49168452|emb|CAG38721.1| RAB5B [Homo sapiens]
Length = 215
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
+LVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 ELVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP------APNPSGMVL 185
V EEAQAYA +N L FMETSAKTA NVND+F IAK+LP+ +P A G+ L
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDL 201
Query: 186 MDRPGERTASASCCS 200
++ + + CCS
Sbjct: 202 HEQSQQN--KSQCCS 214
>gi|340378375|ref|XP_003387703.1| PREDICTED: ras-related protein Rab-5C-like [Amphimedon
queenslandica]
Length = 221
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/171 (71%), Positives = 140/171 (81%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
V ++AQAYA+EN L FMETSAKTA NVN+IF IAK+LP+ P G
Sbjct: 143 MVEYDDAQAYAEENSLLFMETSAKTAMNVNEIFLAIAKKLPKTDPGQQRVG 193
>gi|348511330|ref|XP_003443197.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R + ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 136 ADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEP 187
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 141/169 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 1 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/171 (71%), Positives = 141/171 (82%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKA
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
DL + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 137 DLANKRAVDHQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
>gi|55670031|pdb|1TU3|A Chain A, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670032|pdb|1TU3|B Chain B, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670033|pdb|1TU3|C Chain C, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670034|pdb|1TU3|D Chain D, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670035|pdb|1TU3|E Chain E, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
Length = 171
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 141/169 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 2 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 62 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 122 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 170
>gi|410904529|ref|XP_003965744.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 143/172 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL + R + ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P
Sbjct: 136 ADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEP 187
>gi|27066018|pdb|1N6O|A Chain A, Crystal Structure Of Human Rab5a A30k Mutant Complex With
Gppnhp
Length = 170
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 141/169 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 1 GNKICQFKLVLLGESKVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/204 (63%), Positives = 155/204 (75%), Gaps = 10/204 (4%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
+GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 15 SGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFLRAKNWVKELQRQASPNIVIALAGN 134
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----AP 178
KADL R V ++AQAYA++N L FMETSAKTA NVN++F IAK+LP+ +P AP
Sbjct: 135 KADLASKRAVEFQDAQAYAEDNSLLFMETSAKTAMNVNEVFMAIAKKLPKNEPQNVAGAP 194
Query: 179 NPS-GMVLMD-RPGERTASASCCS 200
+ G+ L + P R CCS
Sbjct: 195 GRNRGVDLQESSPASR---GQCCS 215
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 142/175 (81%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKF
Sbjct: 13 AAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF 72
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 73 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALA 132
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
GNKADL + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 133 GNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
>gi|242006074|ref|XP_002423881.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507127|gb|EEB11143.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 149/192 (77%), Gaps = 4/192 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ +D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICDDDLTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDI N +F +AK WV+ELQ +PN+V+ALAGNKADL D R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDIQNMDTFGKAKSWVKELQRHASPNIVIALAGNKADLSDKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA----PNPSGMVLMD 187
V +EAQAYAQ++GL FMETSAKTA NVN+IF IAK+LP+ + A + G L++
Sbjct: 143 MVETDEAQAYAQDHGLLFMETSAKTAMNVNEIFLAIAKKLPKNEQAGGAGTSGQGRRLVE 202
Query: 188 RPGERTASASCC 199
+ A+ +CC
Sbjct: 203 GGDGQKAAGNCC 214
>gi|47086269|ref|NP_998050.1| ras-related protein Rab-5B [Danio rerio]
gi|42744592|gb|AAH66634.1| RAB5B, member RAS oncogene family [Danio rerio]
Length = 214
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/194 (64%), Positives = 150/194 (77%), Gaps = 9/194 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +FERAK WV+ELQ Q +PN+V+ALAGNKADL D R
Sbjct: 82 YHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS------GMVL 185
V EEAQ YA++ GL FMETSAKTA NVN++F IAK++P+ NP+ G+ L
Sbjct: 142 LVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTD-TQNPTHAARHRGVNL 200
Query: 186 MDRPGERTASASCC 199
D + T SCC
Sbjct: 201 QDPDAQST--RSCC 212
>gi|319401891|ref|NP_001187496.1| ras-related protein rab-5a [Ictalurus punctatus]
gi|308323159|gb|ADO28716.1| ras-related protein rab-5a [Ictalurus punctatus]
Length = 217
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 153/201 (76%), Gaps = 8/201 (3%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 18 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 77
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNKA
Sbjct: 78 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKA 137
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-APNPS--- 181
DL R + ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P AP S
Sbjct: 138 DLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSSAGR 197
Query: 182 --GMVLMDRPGERTASASCCS 200
G+ L + + A CCS
Sbjct: 198 NRGVDLAET--AQPAKGPCCS 216
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 142/175 (81%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKF
Sbjct: 13 AAANNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF 72
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 73 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALA 132
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
GNKADL + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 133 GNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
>gi|27066016|pdb|1N6N|A Chain A, Crystal Structure Of Human Rab5a A30r Mutant Complex With
Gppnhp
Length = 170
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 141/169 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 1 GNKICQFKLVLLGESRVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex With
Gppnhp
Length = 170
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 141/169 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 1 GNKICQFKLVLLGESEVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 142/175 (81%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKF
Sbjct: 13 AAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF 72
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 73 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALA 132
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
GNKADL + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 133 GNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
>gi|330846456|ref|XP_003295044.1| Rab GTPase [Dictyostelium purpureum]
gi|325074347|gb|EGC28427.1| Rab GTPase [Dictyostelium purpureum]
Length = 199
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 143/175 (81%), Gaps = 1/175 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFV+G F+++QESTIGAAF +QT+ +ND TVKFEIWD
Sbjct: 5 NKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYH+LAPMYYRGA AAI+VYDI ++ SFERA KWV+ELQ QG+PN+V+ALAGNK
Sbjct: 65 TAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKL 124
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
DL RKV EAQ YA+ENGL FMETSAKT+ NVN++F EIAK+LP+ P P
Sbjct: 125 DLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKT-PTTRP 178
>gi|119393795|gb|ABL74413.1| Rab5 [Anopheles gambiae]
Length = 213
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QTL ++D TVKFEI
Sbjct: 18 TQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEI 77
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDI N SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 78 WDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGN 137
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL ++R V EEA+ YA +N L FMETSAKTA NVNDIF IAK+LP+ + A P
Sbjct: 138 KADLANSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPKNEGA-GPQQN 196
Query: 184 VLMDRPGERTASASCCS 200
+ + ++ CC+
Sbjct: 197 IRPTQNETNRQNSGCCA 213
>gi|27066021|pdb|1N6R|A Chain A, Crystal Structure Of Human Rab5a A30l Mutant Complex With
Gppnhp
Length = 170
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 141/169 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 1 GNKICQFKLVLLGESLVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>gi|27066009|pdb|1N6I|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp
gi|27066010|pdb|1N6K|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp And Aluminum Fluoride
gi|27066012|pdb|1N6L|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gtp
Length = 170
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 141/169 (83%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 1 GNKICQFKLVLLGESPVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 61 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ------PAP 178
AD+ + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +
Sbjct: 136 ADVANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEAQGTAGAGG 195
Query: 179 NPSGMVLMDRPGERTASASCC 199
V + P + S CC
Sbjct: 196 RARAGVDLQEPAPQGRSGQCC 216
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/171 (70%), Positives = 141/171 (82%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+V+DITN +F RAK WV+ELQ Q +PN+V+ALAGNKA
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
DL + R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 137 DLTNKRNVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
>gi|198426781|ref|XP_002122313.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 217
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 148/192 (77%), Gaps = 4/192 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ + D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLQDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALAGNKADLSNKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN----PSGMVLMD 187
V ++A +YA+ENGL FMETSAKTA +VNDIF IA++LP+ + + +G+ L
Sbjct: 143 MVEHDDAVSYAEENGLLFMETSAKTAMHVNDIFLAIAEKLPKNEAGASANRQSAGVGLTA 202
Query: 188 RPGERTASASCC 199
+ SCC
Sbjct: 203 TDNREGSGKSCC 214
>gi|321476259|gb|EFX87220.1| hypothetical protein DAPPUDRAFT_230436 [Daphnia pulex]
Length = 227
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 148/193 (76%), Gaps = 5/193 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 34 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 93
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+ALAGNKADL R
Sbjct: 94 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKVWVKELQRQASPNIVIALAGNKADLAAKR 153
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
V +EA+ YA+ENGL FMETSAKTA NVNDIF IAK+LP+ A G R +
Sbjct: 154 AVEFDEAKGYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNDGAGGVGGSSGQGRRLD 213
Query: 192 RTA-----SASCC 199
R ++SCC
Sbjct: 214 RAEDGNKPASSCC 226
>gi|410896506|ref|XP_003961740.1| PREDICTED: ras-related protein Rab-5B-like [Takifugu rubripes]
Length = 216
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 149/193 (77%), Gaps = 8/193 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +FERAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 83 YHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLAERR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS------GMVL 185
V EEAQ YA++ GL FMETSAKTA NVND+F IAK++P+ NP+ G+ L
Sbjct: 143 LVEFEEAQTYAEDTGLLFMETSAKTAMNVNDLFLAIAKKMPKTD-TQNPTHAVRHRGVNL 201
Query: 186 MDRPGERTASASC 198
D P + A C
Sbjct: 202 QD-PDTHSTRACC 213
>gi|317419436|emb|CBN81473.1| Ras-related protein Rab-5C [Dicentrarchus labrax]
Length = 221
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 140/175 (80%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A NK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKF
Sbjct: 14 AAVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKF 73
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALA
Sbjct: 74 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALA 133
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
GNKAD+ + R V +EAQ YA +N L FMETSAKTA NVN+IF IAK+LP+ P
Sbjct: 134 GNKADIANKRAVELQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDP 188
>gi|47213194|emb|CAF95985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 213
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 148/193 (76%), Gaps = 8/193 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT + ERAK WV+ELQ Q +PN+V+ALAGNKADL + R
Sbjct: 83 YHSLAPMYYRGAQAAIVVFDITKPETLERAKAWVKELQRQASPNIVIALAGNKADLAERR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS------GMVL 185
V EEAQ YA+E GL FMETSAKTA NVND+F IAK++P+ NP+ G+ L
Sbjct: 143 LVEFEEAQTYAEETGLLFMETSAKTAMNVNDLFLAIAKKMPKTD-TQNPTHAVRHRGVNL 201
Query: 186 MDRPGERTASASC 198
D P + A C
Sbjct: 202 QD-PDTHSTRACC 213
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 140/168 (83%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ +++ TVKFEIWD
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWD 75
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDIT+Q SF +AK WV+ELQ Q +PN+V+AL+GNKA
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITSQESFAKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R V EEAQAYA +N L FMETSAKTA NVNDIF IAK+LP+
Sbjct: 136 DLANKRVVEYEEAQAYADDNALLFMETSAKTAMNVNDIFLAIAKKLPK 183
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ +ND VKFEIWDTAGQER
Sbjct: 22 KLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTIHLNDVAVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +FERAK WV+ELQ Q P +V+ALAGNK DL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQATPGIVIALAGNKLDLNTMR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
V +E+Q YA ENGL FMETSAKT+ NV +IF IA++LP+ + G L++ G
Sbjct: 142 SVQTDESQTYAYENGLLFMETSAKTSANVTEIFKAIAEKLPKNETTNTAGQGRRLVESEG 201
Query: 191 ERTASASCC 199
+ +SCC
Sbjct: 202 ANKSLSSCC 210
>gi|348537690|ref|XP_003456326.1| PREDICTED: ras-related protein Rab-5B-like [Oreochromis niloticus]
Length = 216
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 151/201 (75%), Gaps = 8/201 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T K KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEI
Sbjct: 15 TQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEI 74
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+V+DIT +FERAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGN 134
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-- 181
KADL + R V EEAQ YA++ GL FMETSAKTA NVN++F IAK++P+ NP+
Sbjct: 135 KADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTD-TQNPTHA 193
Query: 182 ----GMVLMDRPGERTASASC 198
G+ L D P + A C
Sbjct: 194 ARHRGVNLQD-PDAHSTRACC 213
>gi|308321755|gb|ADO28020.1| ras-related protein rab-5a [Ictalurus furcatus]
Length = 217
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 152/201 (75%), Gaps = 8/201 (3%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSL+LRFVKGQF EFQESTIG AF +QT+ ++D TVKFEIWD
Sbjct: 18 NKICQFKLVLLGESAVGKSSLMLRFVKGQFHEFQESTIGGAFLTQTVCLDDTTVKFEIWD 77
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNKA
Sbjct: 78 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKA 137
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-APNPS--- 181
DL R + ++AQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P AP S
Sbjct: 138 DLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSSAGR 197
Query: 182 --GMVLMDRPGERTASASCCS 200
G+ L + + A CCS
Sbjct: 198 NRGVDLAET--AQPAKGPCCS 216
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/165 (72%), Positives = 139/165 (84%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+A+AGNKADL + R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIAIAGNKADLANKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 143 AVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 187
>gi|357117431|ref|XP_003560472.1| PREDICTED: ras-related protein Rab5-like [Brachypodium distachyon]
Length = 205
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/201 (60%), Positives = 156/201 (77%), Gaps = 12/201 (5%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-------TVKF 61
I AKLVLLGD+GAGK+S+V+RF KG + + QESTIGAAFFSQ LAV TV+F
Sbjct: 7 IQAKLVLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQALAVRSGGAGGEEDTVRF 66
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
+IWDTAGQERYHSLAPMYYRGAAAA++VYDIT+ S+ RAKKW+ ELQ QGNP++VMAL
Sbjct: 67 DIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSTDSYIRAKKWIDELQRQGNPHLVMALV 126
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GNK DL + R++ +EA YA+ NGLFF+ETSAKTA +++++FYE+A+RL +V+P P+
Sbjct: 127 GNKVDLEEKRQIRTQEALEYAERNGLFFVETSAKTAHHISELFYELAQRLVKVRP-NRPA 185
Query: 182 GMVLMDRPGERTASAS--CCS 200
GM+L + G R+ CCS
Sbjct: 186 GMILHE--GRRSGGGRWFCCS 204
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 138/168 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 48 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 107
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 108 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 167
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
ADL R V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP
Sbjct: 168 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLP 215
>gi|291001341|ref|XP_002683237.1| rab family small GTPase [Naegleria gruberi]
gi|284096866|gb|EFC50493.1| rab family small GTPase [Naegleria gruberi]
Length = 213
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 152/208 (73%), Gaps = 19/208 (9%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K++ KLVLLG+ GKSSLVLRFV+GQF E+QESTIGAAF +QT+ + D VKFEIWDT
Sbjct: 11 KSVPFKLVLLGESSVGKSSLVLRFVRGQFFEYQESTIGAAFLTQTVPLGDTIVKFEIWDT 70
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY SLAPMYYRGAAAAI+VYDIT+ SF+RAK WV+ELQ QG N+V+ALAGNK D
Sbjct: 71 AGQERYKSLAPMYYRGAAAAIVVYDITSADSFQRAKNWVKELQRQGTTNIVIALAGNKVD 130
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR------------V 174
L D R+V + EA++YA++NGL FMETSAK ATNVN++F IA++LP +
Sbjct: 131 LEDKRQVESAEAKSYAEDNGLLFMETSAKAATNVNELFVAIARKLPSKETDNNNNVNSDL 190
Query: 175 QPA--PNPSGMVLMDRPGERTASASCCS 200
PA P P D+P ER CC+
Sbjct: 191 TPAIIPKPG-----DQPPERKQKGGCCN 213
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/169 (70%), Positives = 139/169 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 2 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAP YYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNK
Sbjct: 62 DTAGQERYHSLAPXYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + R V +EAQ+YA +N L F ETSAKT+ NVN+IF IAK+LP+
Sbjct: 122 ADLANKRAVDFQEAQSYADDNSLLFXETSAKTSXNVNEIFXAIAKKLPK 170
>gi|295789553|pdb|3MJH|A Chain A, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
gi|295789555|pdb|3MJH|C Chain C, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
Length = 168
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 139/168 (82%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 1 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 60
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAG ERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GNKA
Sbjct: 61 TAGLERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 120
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+
Sbjct: 121 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 168
>gi|109131470|ref|XP_001086669.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Macaca mulatta]
gi|355704975|gb|EHH30900.1| hypothetical protein EGK_20720 [Macaca mulatta]
gi|355757526|gb|EHH61051.1| hypothetical protein EGM_18978 [Macaca fascicularis]
Length = 215
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 151/203 (74%), Gaps = 8/203 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
DTAGQERYHSLAPMYYRGA A I+VYDITN+ SF RAK WV+ELQ Q +PN V+ALAGN
Sbjct: 74 RDTAGQERYHSLAPMYYRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNTVIALAGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KA+L + R V +EAQ++A +N L FMETSAKT+ +VN+IF IAK+LP+ +P NP
Sbjct: 134 KANLANKRAVNFQEAQSFADDNSLLFMETSAKTSMDVNEIFMAIAKKLPKDEPQ-NPGAN 192
Query: 184 ------VLMDRPGERTASASCCS 200
V + P R + CCS
Sbjct: 193 SARGRGVDLTEP-TRPTRSQCCS 214
>gi|327275534|ref|XP_003222528.1| PREDICTED: ras-related protein Rab-5C-like [Anolis carolinensis]
Length = 216
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 139/172 (80%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q + N+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNMDTFVRAKNWVKELQRQASSNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL R V +EAQAYA +N L FMETSAKTA NVN+ F IAK+LP+ +P
Sbjct: 136 ADLGSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNETFMAIAKKLPKNEP 187
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/170 (69%), Positives = 143/170 (84%), Gaps = 1/170 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 21 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +F+RAK WV+ELQ Q +PN+V+ALAGNK+DL + R
Sbjct: 81 YHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
V EEAQAYA++ GL FMETSAKTA NVN++F IAK++P+ A NP+
Sbjct: 141 MVEYEEAQAYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPK-SDAQNPT 189
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 5/191 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q + +D TVKFEIWDTAGQER
Sbjct: 24 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 83
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA +AI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNK+DL R
Sbjct: 84 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKR 143
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV---LMDR 188
V EEAQAYA ENGL FMETSAKTA NVNDIF IA +LP+ + + L D
Sbjct: 144 MVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSEAGAAGAAGGGRRLAD- 202
Query: 189 PGERTASASCC 199
GE+ + CC
Sbjct: 203 -GEQPRPSQCC 212
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 142/170 (83%), Gaps = 1/170 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 21 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +F+RAK WV+ELQ Q +PN+V+ALAGNK+DL + R
Sbjct: 81 YHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
V EEAQ YA++ GL FMETSAKTA NVN++F IAK++P+ A NP+
Sbjct: 141 MVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPK-SDAQNPT 189
>gi|242093978|ref|XP_002437479.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
gi|241915702|gb|EER88846.1| hypothetical protein SORBIDRAFT_10g027890 [Sorghum bicolor]
Length = 210
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 156/204 (76%), Gaps = 13/204 (6%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIE---------FQESTIGAAFFSQTLAVNDATV 59
I AKLVLLGD+GAGK+S+V+RF KG + E QESTIGAAFFSQ L++++ATV
Sbjct: 7 IQAKLVLLGDLGAGKTSIVVRFAKGLYYECQARTTTSFHQESTIGAAFFSQVLSLDEATV 66
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG-NPNMVM 118
K +IWDTAGQERYHSLAPMYYRGAAAAI+V+DIT+ S+ RAK+WV ELQ QG NP++VM
Sbjct: 67 KLDIWDTAGQERYHSLAPMYYRGAAAAIVVFDITSTDSYVRAKRWVDELQRQGRNPHLVM 126
Query: 119 ALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
AL NK DL + R+V +EA YA+ NGLFF ETSAKTA NV ++FYE+A+RL +++P
Sbjct: 127 ALVANKVDLQERRQVGTQEAMDYAEANGLFFTETSAKTAQNVTELFYELAERLVKLRP-N 185
Query: 179 NPSGMVLMD--RPGERTASASCCS 200
P+GM+L D R G+ + CCS
Sbjct: 186 RPAGMILHDAQRSGDGSRWRFCCS 209
>gi|196000895|ref|XP_002110315.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
gi|190586266|gb|EDV26319.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
Length = 229
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 150/207 (72%), Gaps = 19/207 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE- 70
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQE
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDVTVKFEIWDTAGQEN 81
Query: 71 ------------RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
RYHSLAPMYYRGA AI+VYDI+N SF+RAK WV+ELQ Q +PN+V+
Sbjct: 82 IFLILPSFCRYLRYHSLAPMYYRGAQTAIVVYDISNAESFQRAKAWVKELQRQASPNIVI 141
Query: 119 ALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
ALAGNKADL + R V A+EAQ YA+ENGL FMETSAKTA NVN+IF IAK+LP+ +
Sbjct: 142 ALAGNKADLANKRMVDADEAQVYAEENGLLFMETSAKTAMNVNEIFLAIAKKLPKSEQGG 201
Query: 179 NPSG------MVLMDRPGERTASASCC 199
+ +V +++P + CC
Sbjct: 202 GGAATQGGARVVDINKPANNSGGGGCC 228
>gi|158297331|ref|XP_317585.4| AGAP007901-PA [Anopheles gambiae str. PEST]
gi|157015144|gb|EAA43939.4| AGAP007901-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 135/166 (81%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QTL ++D TVKFEI
Sbjct: 23 TQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEI 82
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDI N SF RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 83 WDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGN 142
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
KADL ++R V EEA+ YA +NGL FMETSAKTA NVNDIF I +
Sbjct: 143 KADLANSRVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIGE 188
>gi|297262644|ref|XP_001096821.2| PREDICTED: ras-related protein Rab-5B-like [Macaca mulatta]
Length = 207
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/189 (65%), Positives = 145/189 (76%), Gaps = 4/189 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
V EEAQAYA +N L FMETSAKTA NVND+F I K L A G+ L ++ +
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKNLGGT--ACRSRGVDLHEQSQQ 199
Query: 192 RTASASCCS 200
+ CCS
Sbjct: 200 N--KSQCCS 206
>gi|26354324|dbj|BAC40790.1| unnamed protein product [Mus musculus]
Length = 234
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 152/218 (69%), Gaps = 22/218 (10%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVT------------------AEEAQAYAQENGLFFMETSAKTATNVNDIFYE 166
ADL R V ++EAQAYA +N L FMETSAKTA NVN+IF
Sbjct: 136 ADLASKRAVEFQPCHLPCSPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMA 195
Query: 167 IAKRLPRVQP---APNPSGMVLMDRPGERTASAS-CCS 200
IAK+LP+ +P A P +D AS S CCS
Sbjct: 196 IAKKLPKNEPQNAAGAPGRTRGVDLQESNPASRSQCCS 233
>gi|215768963|dbj|BAH01192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636110|gb|EEE66242.1| hypothetical protein OsJ_22419 [Oryza sativa Japonica Group]
Length = 200
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 144/172 (83%), Gaps = 1/172 (0%)
Query: 14 VLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 73
VLLGD+GAGK+S+V+RF KG + + QESTIGAAFFSQ L +++ATVK +IWDTAGQERYH
Sbjct: 9 VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYH 68
Query: 74 SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKV 133
SLAPMYYRGAAAA++VYDI++ S+ RA+KWV ELQ QGNP++VMAL GNK DL + R+V
Sbjct: 69 SLAPMYYRGAAAAVVVYDISSTDSYIRARKWVDELQRQGNPHLVMALVGNKVDLEEKRQV 128
Query: 134 TAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
+EA YA+ NGLFF+ETSAKT+ NV ++FYE+A RL +V+P PSGMVL
Sbjct: 129 GTQEAMEYAERNGLFFIETSAKTSQNVTELFYELADRLVKVRPH-RPSGMVL 179
>gi|148670589|gb|EDL02536.1| RAB5C, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 270
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/190 (64%), Positives = 142/190 (74%), Gaps = 18/190 (9%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 52 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 111
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 112 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 171
Query: 125 ADLLDARKVT------------------AEEAQAYAQENGLFFMETSAKTATNVNDIFYE 166
ADL R V ++EAQAYA +N L FMETSAKTA NVN+IF
Sbjct: 172 ADLASKRAVEFQPCHLPCSPPTLFLTCLSQEAQAYADDNSLLFMETSAKTAMNVNEIFMA 231
Query: 167 IAKRLPRVQP 176
IAK+LP+ +P
Sbjct: 232 IAKKLPKNEP 241
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/170 (68%), Positives = 142/170 (83%), Gaps = 1/170 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF E+QE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 21 KLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +F+RAK WV+ELQ Q +PN+V+ALAGNK+DL + R
Sbjct: 81 YHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
V EEAQ YA++ GL FMETSAKTA NVN++F IAK++P+ A NP+
Sbjct: 141 MVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPK-SDAQNPT 189
>gi|323448788|gb|EGB04682.1| hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens]
Length = 195
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 146/188 (77%), Gaps = 2/188 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +Q++ + +ATVKFEIWDTAGQER
Sbjct: 10 KLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQER 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYRGAAAAI+VYDITN+ SF AK WV+ELQ +G+PN+++ALAGNKADL + R
Sbjct: 70 YRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKR 129
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V +EEA+ Y++ENG+ METSAK AT+V D+F EIA++LP+ P P ++ P +
Sbjct: 130 RVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLPKTPPQPERDAFPII--PPK 187
Query: 192 RTASASCC 199
+ CC
Sbjct: 188 HNENKVCC 195
>gi|145349469|ref|XP_001419155.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579386|gb|ABO97448.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 200
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/190 (69%), Positives = 154/190 (81%), Gaps = 3/190 (1%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
AKLVLLGD+GAGKSSLVLRFVKGQF E+QESTIGAAF +QT+ +D T+KFEIWDTAGQE
Sbjct: 13 AKLVLLGDMGAGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCADDRTIKFEIWDTAGQE 72
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RYHSLAPMYYRGAAAAIIVYDI +Q+SF RAK WV+ELQ QGN +VMALAGNK D+ +
Sbjct: 73 RYHSLAPMYYRGAAAAIIVYDIQSQSSFARAKSWVRELQKQGNAALVMALAGNKCDMEEK 132
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPG 190
R+V EEA+AYA ENGLFFMETSAK A NV ++F+EIA +LP+ N G+VL ++
Sbjct: 133 REVEREEAEAYASENGLFFMETSAKEALNVTELFHEIAVKLPKAPTPTNGPGVVLTNQ-- 190
Query: 191 ERTASAS-CC 199
RT S CC
Sbjct: 191 NRTPQKSQCC 200
>gi|218198778|gb|EEC81205.1| hypothetical protein OsI_24236 [Oryza sativa Indica Group]
Length = 200
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 144/172 (83%), Gaps = 1/172 (0%)
Query: 14 VLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 73
VLLGD+GAGK+S+V+RF KG + + QESTIGAAFFSQ L +++ATVK +IWDTAGQERYH
Sbjct: 9 VLLGDLGAGKTSIVVRFAKGLYYDCQESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYH 68
Query: 74 SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKV 133
SLAPMYYRGAAAA++VYDI++ S+ RA+KWV ELQ QGNP++VMAL GNK DL + R+V
Sbjct: 69 SLAPMYYRGAAAAVVVYDISSTDSYIRARKWVDELQRQGNPHLVMALVGNKVDLEEKRQV 128
Query: 134 TAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
+EA YA+ NGLFF+ETSAKT+ NV ++FYE+A RL +V+P PSGMVL
Sbjct: 129 GTQEAMEYAERNGLFFIETSAKTSQNVTELFYELADRLVKVRPY-RPSGMVL 179
>gi|47218775|emb|CAG02761.1| unnamed protein product [Tetraodon nigroviridis]
Length = 228
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 154/216 (71%), Gaps = 24/216 (11%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
G+K KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI------------AKRLP 172
ADL + R + ++AQ+YA +N L FMETSAKT+ NVN+IF I AK+LP
Sbjct: 136 ADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKIAHCSLMVPPAKKLP 195
Query: 173 RVQPAPNPSG--------MVLMDRPGERTASASCCS 200
+ +P + +G + +P RT CCS
Sbjct: 196 KNEPQASGAGSGRNRGVDLTETAQPTSRT----CCS 227
>gi|226372644|gb|ACO51947.1| Ras-related protein Rab-5B [Rana catesbeiana]
Length = 213
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 152/195 (77%), Gaps = 9/195 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF E+QE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 21 KLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +F+RAK WV+ELQ Q +PN+V+ALAGNK+DL + R
Sbjct: 81 YHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS------GMVL 185
V EEAQAYA++ L FMETSAKTA NVN++F IAK++P+ A NP+ G+ L
Sbjct: 141 MVEFEEAQAYAEDTSLLFMETSAKTAMNVNELFLAIAKKMPK-SDAQNPTHAARNRGVNL 199
Query: 186 MDRPGERTASASCCS 200
+ ++ + CCS
Sbjct: 200 --QGSDQQPRSGCCS 212
>gi|73535759|pdb|1Z0D|A Chain A, Gdp-bound Rab5c Gtpase
gi|73535760|pdb|1Z0D|C Chain C, Gdp-bound Rab5c Gtpase
Length = 167
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/161 (73%), Positives = 134/161 (83%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAG ER
Sbjct: 7 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKADL R
Sbjct: 67 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
V +EAQAYA +N L FMETSAKTA NVN+IF IAK+LP
Sbjct: 127 AVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLP 167
>gi|47218843|emb|CAG02828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 150/228 (65%), Gaps = 34/228 (14%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 9 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 68
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKA
Sbjct: 69 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKA 128
Query: 126 DLLDARKVTA----------------------------EEAQAYAQENGLFFMETSAKTA 157
DL + R V +EAQAYA +N L FMETSAKTA
Sbjct: 129 DLANKRAVDHQVWRSSSGHTGKRALPQTSNASVFFMLYQEAQAYADDNSLLFMETSAKTA 188
Query: 158 TNVNDIFYEIAKRLPRVQPAPNPS------GMVLMDRPGERTASASCC 199
NVN+IF IAK+LP+ +P PS G V + + S CC
Sbjct: 189 MNVNEIFMAIAKKLPKNEPQGGPSAGGRARGGVDLQEAAPQGRSGQCC 236
>gi|148232808|ref|NP_001084521.1| RAB5B, member RAS oncogene family [Xenopus laevis]
gi|46250314|gb|AAH68736.1| MGC81204 protein [Xenopus laevis]
Length = 185
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/158 (74%), Positives = 132/158 (83%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +PN+V+AL+GNKADL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
V EEAQAYA +N L FMETSAKTA NVND+F I K
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGK 179
>gi|312376181|gb|EFR23347.1| hypothetical protein AND_13023 [Anopheles darlingi]
Length = 183
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 135/166 (81%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QTL ++D TVKFEI
Sbjct: 18 TQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEI 77
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDI N S+ RAK WV+ELQ Q +PN+V+ALAGN
Sbjct: 78 WDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSYARAKTWVKELQRQASPNIVIALAGN 137
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
KADL ++R V EEA+ YA +NGL FMETSAKTA NVNDIF I +
Sbjct: 138 KADLANSRVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIGE 183
>gi|13096181|pdb|1HUQ|A Chain A, 1.8a Crystal Structure Of The Monomeric Gtpase Rab5c
(Mouse)
Length = 164
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/160 (73%), Positives = 134/160 (83%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 5 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 64
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKADL R
Sbjct: 65 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 124
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
V +EAQAYA +N L FMETSAKTA NVN+IF IAK+L
Sbjct: 125 AVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 164
>gi|326436303|gb|EGD81873.1| RAB5C protein [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 144/201 (71%), Gaps = 2/201 (0%)
Query: 1 MATTGNKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT- 58
MA G + +N KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D T
Sbjct: 1 MAGRGGQQMNQFKLVLLGETAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDGTK 60
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
VKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDIT+ ASF RAK WV+ELQ Q V+
Sbjct: 61 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITSHASFLRAKSWVKELQKQAENVAVI 120
Query: 119 ALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
ALAGNKADL R+V EE +AYAQE L FMETSAKTA NV +IF IAK LP+ Q
Sbjct: 121 ALAGNKADLAARREVQTEEVEAYAQEEKLLFMETSAKTAFNVVEIFAAIAKHLPKNQDTR 180
Query: 179 NPSGMVLMDRPGERTASASCC 199
G+ L S CC
Sbjct: 181 RGDGVNLRRAEAAEAKSGGCC 201
>gi|328790844|ref|XP_003251474.1| PREDICTED: ras-related protein Rab-5B-like [Apis mellifera]
Length = 221
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/167 (71%), Positives = 136/167 (81%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFE
Sbjct: 13 STQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RA+ WV+ELQ Q +P++V+ALAG
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAG 132
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
NKADL + R V +EAQ YA ENGL FMETSAKTA NVNDIF I K
Sbjct: 133 NKADLANKRIVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIGK 179
>gi|414869112|tpg|DAA47669.1| TPA: putative GTP-binding protein [Zea mays]
Length = 140
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 120/138 (86%), Positives = 127/138 (92%), Gaps = 2/138 (1%)
Query: 1 MATT--GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT 58
MA T GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND T
Sbjct: 1 MAATAGGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDET 60
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
VKFEIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN N ++
Sbjct: 61 VKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIV 120
Query: 119 ALAGNKADLLDARKVTAE 136
ALAGNKADLLD R+V+A+
Sbjct: 121 ALAGNKADLLDTRQVSAD 138
>gi|89258417|gb|ABD65432.1| Rab5 [Suberites domuncula]
Length = 207
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/158 (74%), Positives = 131/158 (82%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKADL R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNNDTFVRAKSWVKELQRQASPNIVIALAGNKADLASKR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
V EEA YA+EN L FMETSAKTA NVNDIF IAK
Sbjct: 143 MVDFEEAHVYAEENSLLFMETSAKTAMNVNDIFLAIAK 180
>gi|412993473|emb|CCO13984.1| unknown [Bathycoccus prasinos]
Length = 208
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/194 (65%), Positives = 151/194 (77%), Gaps = 5/194 (2%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
AKLVLLGD+GAGKSSLVLRFVKGQF E QESTIGAAF +QT+ V+D VKFEIWDTAGQE
Sbjct: 15 AKLVLLGDMGAGKSSLVLRFVKGQFFEHQESTIGAAFMTQTVTVDDHVVKFEIWDTAGQE 74
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RYHSLAPMYYRGAAAAIIVYD+ +Q S++RAK WV+ELQ QGN N+V+ALAGNK+D D
Sbjct: 75 RYHSLAPMYYRGAAAAIIVYDMQSQQSWQRAKSWVRELQRQGNANLVIALAGNKSDCKDM 134
Query: 131 RKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRLP---RVQPAPNPSGMVLM 186
RKV+ EEA+AYA+E L F+ETSAK+ VND+FY IA +LP R P G V++
Sbjct: 135 RKVSKEEAEAYAEEQKLSIFLETSAKSGECVNDLFYSIANKLPKQARATPQEGGRGGVVL 194
Query: 187 D-RPGERTASASCC 199
D G+ + CC
Sbjct: 195 DANAGQNRQKSQCC 208
>gi|73535746|pdb|1Z07|A Chain A, Gppnhp-Bound Rab5c G55q Mutant Gtpase
Length = 166
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/160 (73%), Positives = 133/160 (83%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTI AAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 7 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIQAAFLTQTVCLDDTTVKFEIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKADL R
Sbjct: 67 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
V +EAQAYA +N L FMETSAKTA NVN+IF IAK+L
Sbjct: 127 AVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 166
>gi|55962807|emb|CAI11701.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 180
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/158 (72%), Positives = 133/158 (84%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +FERAK WV+ELQ Q +PN+V+ALAGNKADL D R
Sbjct: 82 YHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
V EEAQ YA++ GL FMETSAKTA NVN++F I K
Sbjct: 142 LVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIGK 179
>gi|219111761|ref|XP_002177632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410517|gb|EEC50446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 141/188 (75%), Gaps = 3/188 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +QT+ ++DATVKFEIWDTAGQER
Sbjct: 17 KLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDATVKFEIWDTAGQER 76
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYRGA+AAI+VYDITN SF AK WV+ELQ +G+PN+V+ALAGNKADL R
Sbjct: 77 YRSLAPMYYRGASAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADLETRR 136
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
V EEA AYAQENG+ +ETSAK A NV +F EIAK LP+ P P ++ + E
Sbjct: 137 AVEFEEANAYAQENGILHLETSAKNANNVKSLFIEIAKTLPKNAPQPEKEAFPILQQQQE 196
Query: 192 RTASASCC 199
+ +CC
Sbjct: 197 ---TRNCC 201
>gi|125545158|gb|EAY91297.1| hypothetical protein OsI_12911 [Oryza sativa Indica Group]
gi|125569268|gb|EAZ10783.1| hypothetical protein OsJ_00618 [Oryza sativa Japonica Group]
Length = 139
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/136 (86%), Positives = 124/136 (91%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN + V+ALA
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALA 122
Query: 122 GNKADLLDARKVTAEE 137
GNKADLL+ R+V EE
Sbjct: 123 GNKADLLETRQVQIEE 138
>gi|298705900|emb|CBJ29030.1| Rab5, RAB family GTPase [Ectocarpus siliculosus]
Length = 195
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD GKS LV+RFV+ +F E+QE TIGAAF +Q + ++DATVKFEIWDTAGQER
Sbjct: 10 KLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQER 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYRGAAAAI+VYD+TN+ SF AK WV+ELQ +G+PN+++ALAGNKADL R
Sbjct: 70 YRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRR 129
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V +EEA+ YA++NGL METSAK+A NV IF EIA++LP+ P +M RP
Sbjct: 130 QVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIM-RPRT 188
Query: 192 RTASASC 198
S C
Sbjct: 189 EQKSGCC 195
>gi|357454979|ref|XP_003597770.1| Ras-related protein Rab-5C [Medicago truncatula]
gi|355486818|gb|AES68021.1| Ras-related protein Rab-5C [Medicago truncatula]
Length = 229
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 153/229 (66%), Gaps = 30/229 (13%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
M+ GNK I AKLVLLGD+G GK+SL LRFVKGQF + QE TIGAAFF+Q L++++ATVK
Sbjct: 1 MSRPGNKIIQAKLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAAI+VYDI++ +F RAKKWVQELQ G+ +VMAL
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDISSIDTFVRAKKWVQELQRHGSQKLVMAL 120
Query: 121 AGNKADLLDARKVTAE-----------------------------EAQAYAQENGLFFME 151
NK DL R+V E + + +AQENG+F+ME
Sbjct: 121 VANKCDLEPKREVETEVVFKSSSHPFPLFFSNKYVSVDVFGSDVNDGEQFAQENGMFYME 180
Query: 152 TSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCCS 200
TSAKTA N+N++FYEI +RL R P+ P G+ L + CCS
Sbjct: 181 TSAKTAENINELFYEIGRRLARAFPS-KPPGITLRNEIPGGGRKFFCCS 228
>gi|223995249|ref|XP_002287308.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220976424|gb|EED94751.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 193
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 146/195 (74%), Gaps = 3/195 (1%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N+ + KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +QT+A++DATVKFEIW
Sbjct: 2 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYRGAAAAI+VYDITN SF AK WV+ELQ +G+ ++V+A+AGNK
Sbjct: 62 DTAGQERYRSLAPMYYRGAAAAIVVYDITNPDSFAGAKSWVKELQRRGDQDVVIAMAGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
ADL R+V EEA AYA+ENG+ METSAK A NV +F EIA+RLP+ P+
Sbjct: 122 ADLEARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPDREAFP 181
Query: 185 LMDRPGERTASASCC 199
+M + E S +CC
Sbjct: 182 IMPQKQE---SRNCC 193
>gi|313213264|emb|CBY37104.1| unnamed protein product [Oikopleura dioica]
gi|313226486|emb|CBY21631.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/168 (67%), Positives = 137/168 (81%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK I KLVLLG+ GKSSLVLRFVKG+F + QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 9 NKIIQFKLVLLGEAAVGKSSLVLRFVKGEFKDHQESTIGAAFLTQTVCLDDVTVKFEIWD 68
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AA++VYDI +F RA+ WV+EL+ Q N ++V+ALAGNKA
Sbjct: 69 TAGQERYHSLAPMYYRGAQAAVVVYDIQCPDTFSRAQAWVKELRQQANQDIVIALAGNKA 128
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL R++ EEA+ YA+EN L FMETSAKTA NVND+F +IAK+LP+
Sbjct: 129 DLAAKREIETEEAEVYAKENNLLFMETSAKTALNVNDLFLQIAKKLPK 176
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 141/194 (72%), Gaps = 2/194 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
K + KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +QT+ + D TVKFEIWD
Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGAAAAI+VYD+TN+ SF AK WV+ELQ +G+PN+V+ALAGNKA
Sbjct: 65 TAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKA 124
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL RKV EEA YA++N + METSAKTA NV D+F IAKRLP+ P P +
Sbjct: 125 DLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPI 184
Query: 186 MDRPGERTASASCC 199
P + + CC
Sbjct: 185 TP-PQASKSKSGCC 197
>gi|115482198|ref|NP_001064692.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|78708729|gb|ABB47704.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639301|dbj|BAF26606.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|215687260|dbj|BAG91825.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765709|dbj|BAG87406.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 250
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VKFEIWD
Sbjct: 79 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWD 138
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGA AAI+VYDIT+ SF +A+ WV+ELQ G+P+M+MAL GNKA
Sbjct: 139 TAGQERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSPDMIMALVGNKA 198
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
DL D R V++++AQ YA+ N +FF+ETSAKTA N+N +F EIAKRLPR P+
Sbjct: 199 DLHDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRLPRPTPS 250
>gi|325303414|tpg|DAA34126.1| TPA_exp: Rab5-related subfamily protein 481 [Amblyomma variegatum]
Length = 179
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/157 (73%), Positives = 131/157 (83%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL R
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASQR 142
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
V EEAQAY++E GL FMETSAKTA +DIF IA
Sbjct: 143 AVELEEAQAYSEEXGLLFMETSAKTAMKRHDIFLAIA 179
>gi|351713433|gb|EHB16352.1| Ras-related protein Rab-5A [Heterocephalus glaber]
Length = 221
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 147/205 (71%), Gaps = 8/205 (3%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A TGNK KLVLLG+ GKSSLVL FVKGQF EFQEST GAAF +QT+ ++D TVKF
Sbjct: 12 ANTGNKICQFKLVLLGESVVGKSSLVLHFVKGQFHEFQESTTGAAFLTQTMCLDDTTVKF 71
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWD AGQERYHSLAPM+YRGA A+I+VYDITN+ SF RAK WV+ELQ Q +PN+ +AL
Sbjct: 72 EIWDIAGQERYHSLAPMHYRGAQASIVVYDITNEESFARAKNWVKELQRQASPNIAIALL 131
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
GN ADL + R V +EAQ+ A +N F+ETSAKT+ NVN+IF IAK+L + +P NP
Sbjct: 132 GNTADLANRRAVDFQEAQSCADDNSFLFLETSAKTSMNVNEIFMAIAKKLSKNEPQ-NPG 190
Query: 182 GM------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 191 ENSARGRGVDLTEPTQPTRS-QCCS 214
>gi|397511745|ref|XP_003826227.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pan paniscus]
Length = 202
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 145/204 (71%), Gaps = 23/204 (11%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIG VKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG--------------VKFEI 59
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 60 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 119
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-- 181
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 120 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 178
Query: 182 -----GMVLMDRPGERTASASCCS 200
G V + P + T + CCS
Sbjct: 179 SARGRGGVDLTEPTQPTRN-QCCS 201
>gi|116781044|gb|ABK21941.1| unknown [Picea sitchensis]
gi|224286274|gb|ACN40846.1| unknown [Picea sitchensis]
Length = 202
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/172 (65%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIW
Sbjct: 28 SKNLRIKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSTTVKFEIW 87
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAP+YYRGA+AA+IVYDIT +F +A+ WV+ELQ GNPN+VMAL GNK
Sbjct: 88 DTAGQERYASLAPLYYRGASAAVIVYDITCMETFHKAQFWVKELQKHGNPNIVMALVGNK 147
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
ADL ++R V + AQAYA NG+F +ETSAKTA N+N +F EIAKRLPR P
Sbjct: 148 ADLEESRSVGHDVAQAYADANGMFLIETSAKTADNINQLFEEIAKRLPRTTP 199
>gi|332215306|ref|XP_003256782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Nomascus
leucogenys]
gi|395734106|ref|XP_003776358.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Pongo abelii]
Length = 201
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 144/203 (70%), Gaps = 22/203 (10%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIG VKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG--------------VKFEI 59
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 60 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 119
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 120 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 178
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 179 SARGRGVDLTEPTQPTRS-QCCS 200
>gi|242036893|ref|XP_002465841.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
gi|241919695|gb|EER92839.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
Length = 200
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 140/171 (81%), Gaps = 1/171 (0%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFE 62
T +K++ AKLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VKFE
Sbjct: 26 TDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFE 85
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY +LAP+YYRGAAAAI+VYDIT+ SF +A+ WV+ELQ G+P +VM L G
Sbjct: 86 IWDTAGQERYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVG 145
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
NKADL D R V++++AQ YA++N +FF+ETSAKTA N+N +F EIAKRLPR
Sbjct: 146 NKADLHDNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLPR 196
>gi|431890611|gb|ELK01490.1| Ras-related protein Rab-5C [Pteropus alecto]
Length = 258
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 153/245 (62%), Gaps = 52/245 (21%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIG-------------------- 44
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIG
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGGAFLCLSQQKASEYQSPDAA 75
Query: 45 ----------------------AAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82
AAF +QT+ ++D TVKFEIWDTAGQERYHSLAPMYYRG
Sbjct: 76 VEMGGHGCSSSFLPGTITFPLTAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRG 135
Query: 83 AAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYA 142
A AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNKADL R V +EAQAYA
Sbjct: 136 AQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYA 195
Query: 143 QENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APNPSGMVLM--DRPGERTAS 195
+N L FMETSAKTA NVN+IF IAK+LP+ +P AP + V + + P R+
Sbjct: 196 DDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQENNPASRS-- 253
Query: 196 ASCCS 200
CCS
Sbjct: 254 -QCCS 257
>gi|395816588|ref|XP_003781782.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Otolemur
garnettii]
gi|410971501|ref|XP_003992207.1| PREDICTED: ras-related protein Rab-5A isoform 2 [Felis catus]
Length = 201
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 144/203 (70%), Gaps = 22/203 (10%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIG VKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG--------------VKFEI 59
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 60 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 119
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 120 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 178
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T S CCS
Sbjct: 179 SARGRGVDLTEPTQPTRS-QCCS 200
>gi|357114010|ref|XP_003558794.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 199
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%), Gaps = 1/171 (0%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFE 62
T + + AKLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VKFE
Sbjct: 25 TDSNELRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFE 84
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY +LAP+YYRGAAAAI+VYDIT+ SF++A+ WV+ELQ GNP ++M L G
Sbjct: 85 IWDTAGQERYAALAPLYYRGAAAAIVVYDITSPESFKKAQYWVKELQKHGNPGIIMVLVG 144
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
NKADL ++R V +EAQ YA++N +FFMETSAKTA N+N +F EIAKRLPR
Sbjct: 145 NKADLHESRSVPTQEAQEYAEKNSMFFMETSAKTADNINQLFEEIAKRLPR 195
>gi|215422530|dbj|BAG85378.1| Rab5-GTP binding protein [Periplaneta americana]
Length = 213
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 119/171 (69%), Positives = 131/171 (76%), Gaps = 2/171 (1%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
T NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q L V D VKFE
Sbjct: 18 TVQNKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQPLRVEDTAVKFE 77
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERYHSLAPMYYRGA AAI+VYDI NQ +F RAK WV+EL Q +P +V+ALAG
Sbjct: 78 IWDTAGQERYHSLAPMYYRGAQAAIVVYDIPNQDTFGRAKNWVKELHKQASPPIVIALAG 137
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
NKADL + R V EEAQ YA EN L METSAKT VNDIF IAK+LP+
Sbjct: 138 NKADLANKRVVEFEEAQQYADENRLLIMETSAKTM--VNDIFLAIAKKLPK 186
>gi|194381626|dbj|BAG58767.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 144/203 (70%), Gaps = 22/203 (10%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIG VKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIG--------------VKFEI 59
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 60 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 119
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
KADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P NP
Sbjct: 120 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-NPGAN 178
Query: 184 ------VLMDRPGERTASASCCS 200
V + P + T + CCS
Sbjct: 179 SARGRGVDLTEPTQPTRN-QCCS 200
>gi|226531049|ref|NP_001149278.1| LOC100282900 [Zea mays]
gi|195625976|gb|ACG34818.1| ras-related protein RHN1 [Zea mays]
gi|223949965|gb|ACN29066.1| unknown [Zea mays]
gi|413957021|gb|AFW89670.1| Ras protein RHN1 [Zea mays]
Length = 200
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+K++ AKLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VKFEIW
Sbjct: 28 SKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIW 87
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY +LAP+YYRGAAAAI+VYDIT+ SF +A+ WV+ELQ G+P +VM L GNK
Sbjct: 88 DTAGQERYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVGNK 147
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL D R V++++AQ YA++N +FF+ETSAKTA N+N +F EIAKRLPR
Sbjct: 148 ADLHDNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLPR 196
>gi|357146391|ref|XP_003573975.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 200
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 140/176 (79%), Gaps = 1/176 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VK 60
+ T +KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VK
Sbjct: 23 SATDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVK 82
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERY +LAP+YYRGA AA++VYDIT+ SF +A+ WV+ELQ G+ +MVMAL
Sbjct: 83 FEIWDTAGQERYAALAPLYYRGAGAAVVVYDITSAESFSKAQYWVKELQKHGSQDMVMAL 142
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
GNKADL + R V++++AQ YA+ N +FF+ETSAKTA N+N +F EIAKRLPR P
Sbjct: 143 VGNKADLHEKRTVSSQDAQEYAERNSMFFVETSAKTADNINQLFEEIAKRLPRPTP 198
>gi|397569787|gb|EJK46965.1| hypothetical protein THAOC_34347 [Thalassiosira oceanica]
Length = 206
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 142/200 (71%), Gaps = 15/200 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +QT+A++DATVKFEIWDTAGQER
Sbjct: 10 KLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQER 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL----------- 120
Y SLAPMYYRGAAAAIIVYDITN SF AK WV+ELQ +G+ N+V+A+
Sbjct: 70 YRSLAPMYYRGAAAAIIVYDITNPDSFAGAKSWVKELQRRGDQNVVIAMLTGSESDLITR 129
Query: 121 -AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
AGNKADL RKV EA YA+ENG+ METSAK A NV +F EIAK+LP+ Q P+
Sbjct: 130 QAGNKADLEARRKVDFNEANDYAEENGILHMETSAKNANNVKSLFVEIAKKLPKAQQQPD 189
Query: 180 PSGMVLMDRPGERTASASCC 199
++ + E S SCC
Sbjct: 190 REAFPILPQKQE---SRSCC 206
>gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus]
gi|388498868|gb|AFK37500.1| unknown [Lotus japonicus]
Length = 200
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 138/168 (82%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 29 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWD 88
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ SF +A+ WV+ELQ GNP++VMAL GNKA
Sbjct: 89 TAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGNPDIVMALVGNKA 148
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DLL+ R+V ++ YA++NG+FF+ETSAKTA N+N++F EIAKRLPR
Sbjct: 149 DLLEKREVAVQDGIDYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 196
>gi|449444622|ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
gi|449490416|ref|XP_004158599.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
Length = 199
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIW
Sbjct: 27 SKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIW 86
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY +LAP+YYRGAA A+IVYDIT+ SF +A+ WV+ELQ G+P++++AL GNK
Sbjct: 87 DTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALVGNK 146
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL + RKVT ++ YA++NG+FF+ETSAKTA N+N++F EIAKRLPR
Sbjct: 147 ADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 195
>gi|3153154|emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crystallinum]
Length = 201
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30 KNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSSTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ SF +A+ WV+ELQ G+P+++MAL GNKA
Sbjct: 90 TAGQERYAALAPLYYRGAAVAVIVYDITSPESFTKAQYWVKELQKHGSPDIIMALVGNKA 149
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
DL + R+V A++ YA++NG+FF+ETSAKTA N+N +F EIAKRLPR+ P+
Sbjct: 150 DLQERREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRLLPS 201
>gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|11992279|gb|AAG42497.1|AF323991_1 small GTP-binding protein RAB5B [Oryza sativa Indica Group]
gi|108706223|gb|ABF94018.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113547459|dbj|BAF10902.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|215740565|dbj|BAG97221.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768306|dbj|BAH00535.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192105|gb|EEC74532.1| hypothetical protein OsI_10050 [Oryza sativa Indica Group]
gi|222624202|gb|EEE58334.1| hypothetical protein OsJ_09439 [Oryza sativa Japonica Group]
Length = 199
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VK 60
+ T +K++ AKLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VK
Sbjct: 23 SATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVK 82
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERY +LAP+YYRGAAAA++VYDIT+ SF +A+ WV+ELQ G+P+++M L
Sbjct: 83 FEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVL 142
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
GNKADL + R V+++EAQ YA++N + F+ETSAKTA N+N +F EIAKRLPR
Sbjct: 143 VGNKADLHENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRLPR 195
>gi|9988838|gb|AAG10794.1|AF296447_1 Rab5 [Toxoplasma gondii]
Length = 240
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 146/195 (74%), Gaps = 1/195 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K ++ KLVLLGD GKS LV+RF K +F E+QESTIGAAF +Q++ + VKFEIWDT
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDT 100
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN-PNMVMALAGNKA 125
AGQERY SLAPMYYRGAAAA++VYDI+N+ SF+ AK WVQELQ+ + N+V+ALAGNK
Sbjct: 101 AGQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKE 160
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL R+V +EAQ YA E+G+ F+ETSAKT NVN++FYEIA LP+ + +P G L
Sbjct: 161 DLAAERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPPGFQL 220
Query: 186 MDRPGERTASASCCS 200
++++S+S C+
Sbjct: 221 NKTQEQKSSSSSWCA 235
>gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein RAB5B [Oryza sativa]
gi|5931625|dbj|BAA84717.1| rab5B [Oryza sativa Japonica Group]
Length = 199
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VK 60
+ T +K++ AKLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VK
Sbjct: 23 SATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVK 82
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERY +LAP+YYRGAAAA++VYDIT+ SF +A+ WV+ELQ G+P+++M L
Sbjct: 83 FEIWDTAGQERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVL 142
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
GNKADL R V+++EAQ YA++N + F+ETSAKTA N+N +F EIAKRLPR
Sbjct: 143 VGNKADLHKNRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRLPR 195
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 142/194 (73%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+++++ KLVLLGD GKS LV+RFV+ +F FQE TIGAAF +QT+ V++ T+KFEIWD
Sbjct: 3 DQSLHFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTIGAAFLTQTVNVDNVTIKFEIWD 62
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGAAAAI+VYDIT++ SF AK WV+ELQ +G+PN+V+ALAGNK
Sbjct: 63 TAGQERYRSLAPMYYRGAAAAIVVYDITSRESFNGAKTWVKELQRRGDPNVVIALAGNKC 122
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL + R++ EEA+ YA ENGL FMETSAK A NV +IF I +LP+ P + +
Sbjct: 123 DLEENRQIPREEAEEYAVENGLLFMETSAKMALNVREIFESIGHKLPKGAPVQEKTDAFV 182
Query: 186 MDRPGERTASASCC 199
+ P + C
Sbjct: 183 IAPPQQSEKKKCDC 196
>gi|422294642|gb|EKU21942.1| Ras-related protein Rab-5C, partial [Nannochloropsis gaditana
CCMP526]
Length = 261
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 148/200 (74%), Gaps = 6/200 (3%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
+++ N+ + KLVLLGD GKS LV+RFV+ +F E+QE TIGAAF +Q + + D+TVKF
Sbjct: 66 SSSNNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKF 125
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERY SLAPMYYRGA+AAI+VYDITN SF+ AK WV+ELQ +G+P++++ALA
Sbjct: 126 EIWDTAGQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALA 185
Query: 122 GNKADLLDA-RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPN 179
GNKADL RKV ++A+ YA+ENGL ETSAK A NV +F EIAKRLP+ V P
Sbjct: 186 GNKADLAGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLPKAVAPVER 245
Query: 180 PSGMVLMDRPGERTASASCC 199
+ ++ + +R SCC
Sbjct: 246 EAFPIVAPKASKR----SCC 261
>gi|356576246|ref|XP_003556244.1| PREDICTED: ras-related protein RABF1 [Glycine max]
Length = 200
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/168 (63%), Positives = 137/168 (81%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 29 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWD 88
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 89 TAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKA 148
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DLL+ R+V ++ YA++N +FF+ETSAKTA N+N++F EIAKRLPR
Sbjct: 149 DLLEKREVAVQDGTDYAEKNDMFFIETSAKTADNINELFEEIAKRLPR 196
>gi|168030601|ref|XP_001767811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680893|gb|EDQ67325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 139/170 (81%), Gaps = 1/170 (0%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTA 67
++ LVLLGD G GKS ++LRFV+GQF + T+GA+F SQT+++ D+T VKFEIWDTA
Sbjct: 1 MDTTLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIWDTA 60
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
GQERY SLAP+YYRGAAAA++VYDITN +F +A+ WV+ELQ GNP++VMAL GNKADL
Sbjct: 61 GQERYASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADL 120
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
+ R+V+ EAQAYA+ NG+FF+ETSAKT+ NVN +F EIAKRLPR Q +
Sbjct: 121 ENEREVSHAEAQAYAKSNGMFFIETSAKTSENVNQLFEEIAKRLPRGQSS 170
>gi|388518999|gb|AFK47561.1| unknown [Medicago truncatula]
Length = 199
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/168 (63%), Positives = 136/168 (80%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 28 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWD 87
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+I YDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 88 TAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKA 147
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R+V E+ YA++NG+FF+ETSAKTA N+N++F EIAKRLPR
Sbjct: 148 DLQEKREVAVEDGMDYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 195
>gi|218184610|gb|EEC67037.1| hypothetical protein OsI_33775 [Oryza sativa Indica Group]
Length = 263
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 139/189 (73%), Gaps = 15/189 (7%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFE 62
T KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VKFE
Sbjct: 75 TDPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFE 134
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWV--------------QEL 108
IWDTAGQERY +LAP+YYRGA AAI+VYDIT+ SF +A+ WV EL
Sbjct: 135 IWDTAGQERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKMYVDHGLHLTSINHEL 194
Query: 109 QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
Q G+P+M+MAL GNKADL D R V++++AQ YA+ N +FF+ETSAKTA N+N +F EIA
Sbjct: 195 QKHGSPDMIMALVGNKADLHDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIA 254
Query: 169 KRLPRVQPA 177
KRLPR P+
Sbjct: 255 KRLPRPTPS 263
>gi|224097801|ref|XP_002311076.1| predicted protein [Populus trichocarpa]
gi|222850896|gb|EEE88443.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 136/168 (80%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + TIGA+F SQT+A+ D+T VKFEIWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ +F +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 90 TAGQERYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R+V ++ YA++NG+FFMETSAKTA N+N +F EIAKRLPR
Sbjct: 150 DLQEKREVPTQDGIDYAEKNGMFFMETSAKTADNINQLFEEIAKRLPR 197
>gi|18410144|ref|NP_567008.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75169988|sp|Q9CB01.1|RABF1_ARATH RecName: Full=Ras-related protein RABF1; Short=AtRABF1; AltName:
Full=Ras-related protein Ara-6; AltName:
Full=Ras-related protein Rab5C; Short=AtRab5C
gi|13160603|dbj|BAB32953.1| Ara6 [Arabidopsis thaliana]
gi|27754459|gb|AAO22677.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|28393957|gb|AAO42386.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|332645777|gb|AEE79298.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 202
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 138/174 (79%), Gaps = 3/174 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGA A+IVYDIT+ SF++A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 90 TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
DL + R+V E+ A++NG+FF+ETSAKTA N+N +F EI KRLPR PAP+
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPR--PAPS 201
>gi|222612895|gb|EEE51027.1| hypothetical protein OsJ_31672 [Oryza sativa Japonica Group]
Length = 264
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 138/186 (74%), Gaps = 15/186 (8%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VKFEIWD
Sbjct: 79 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWD 138
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWV--------------QELQAQ 111
TAGQERY +LAP+YYRGA AAI+VYDIT+ SF +A+ WV ELQ
Sbjct: 139 TAGQERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKMYVDHGLHLTSINHELQKH 198
Query: 112 GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
G+P+M+MAL GNKADL D R V++++AQ YA+ N +FF+ETSAKTA N+N +F EIAKRL
Sbjct: 199 GSPDMIMALVGNKADLHDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRL 258
Query: 172 PRVQPA 177
PR P+
Sbjct: 259 PRPTPS 264
>gi|168068031|ref|XP_001785900.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662426|gb|EDQ49283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 139/170 (81%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+KN+ KLVLLGD G GKS ++LRFV+GQF + T+GA+F SQT+ + D+T+KFEIWD
Sbjct: 28 SKNLRIKLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTINLQDSTIKFEIWD 87
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAP+YYRGA+AA++VYDITN +F +A+ WV+ELQ GNP++VMAL GNKA
Sbjct: 88 TAGQERYSSLAPLYYRGASAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKA 147
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ 175
DL R+V+ EEA AYA+ NG+FF+ETSAKTA NVN +F EIAKRLPR Q
Sbjct: 148 DLESEREVSREEALAYAESNGMFFIETSAKTADNVNQLFEEIAKRLPRGQ 197
>gi|297816780|ref|XP_002876273.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322111|gb|EFH52532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 138/174 (79%), Gaps = 3/174 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGA A+IVYDIT+ SF++A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 90 TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
DL + R+V E+ A++NG+FF+ETSAKTA N+N +F EI KRLPR PAP+
Sbjct: 150 DLHEKREVPTEDGIGLAEKNGMFFIETSAKTADNINQLFEEIGKRLPR--PAPS 201
>gi|237839103|ref|XP_002368849.1| Rab 5 [Toxoplasma gondii ME49]
gi|211966513|gb|EEB01709.1| Rab 5 [Toxoplasma gondii ME49]
Length = 241
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 147/196 (75%), Gaps = 2/196 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K ++ KLVLLGD GKS LV+RF K +F E+QESTIGAAF +Q++ + VKFEIWDT
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDT 100
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN-PNMVMALAGNKA 125
AGQERY SLAPMYYRGAAAA++VYDI+N+ SF+ AK WVQELQ+ + N+V+ALAGNK
Sbjct: 101 AGQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKE 160
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMV 184
DL R+V +EAQ YA E+G+ F+ETSAKT NVN++FYEIA LP+ + +P +G
Sbjct: 161 DLAAERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPHAGFQ 220
Query: 185 LMDRPGERTASASCCS 200
L ++++S+S C+
Sbjct: 221 LNKTQEQKSSSSSWCA 236
>gi|302780591|ref|XP_002972070.1| rab family GTPase [Selaginella moellendorffii]
gi|300160369|gb|EFJ26987.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
K++ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 28 KHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVKFEIWD 87
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAP+YYRGA+AA++VYD+T++ SF++A+ WV+ELQ N +V+AL GNKA
Sbjct: 88 TAGQERYASLAPLYYRGASAAVVVYDLTSKESFQKAQYWVKELQKHANAGIVLALVGNKA 147
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
DL + R V+ +EA+AYA+ N +FF E SAKTA N+N++F EIAKRLPR QP+
Sbjct: 148 DLDNLRTVSTDEARAYAESNSMFFTEASAKTAGNINEVFEEIAKRLPRGQPS 199
>gi|256078263|ref|XP_002575416.1| rab5 [Schistosoma mansoni]
gi|353230409|emb|CCD76580.1| putative rab5 [Schistosoma mansoni]
Length = 198
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND--ATVKFEIWDTAGQ 69
KLV+LG+ GKSS+VLR VK QF E+QE+TIGAA+ +QT+ +ND ATVKFEIWDTAGQ
Sbjct: 8 KLVILGESAVGKSSIVLRLVKCQFSEYQEATIGAAYLTQTIVLNDPPATVKFEIWDTAGQ 67
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERYHSLAPMYYRGA AA++VYDITNQ SFERAK W+ ELQ + N + V+ALAGNK DL
Sbjct: 68 ERYHSLAPMYYRGAQAAVVVYDITNQNSFERAKSWINELQEKANTSGVIALAGNKVDLEG 127
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRP 189
R V+ EEAQ YA +N L FMETSAK +TNV+++F IA+ L PSG +
Sbjct: 128 QRAVSFEEAQEYADKNRLLFMETSAKISTNVSELFTAIARELLSHAEPSRPSGGQQLTPN 187
Query: 190 GERTASASCC 199
T CC
Sbjct: 188 DSPTQQRQCC 197
>gi|302781680|ref|XP_002972614.1| rab family GTPase [Selaginella moellendorffii]
gi|300160081|gb|EFJ26700.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
K++ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 28 KHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVKFEIWD 87
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAP+YYRGA+AA++VYD+T++ SF++A+ WV+ELQ N +V+AL GNKA
Sbjct: 88 TAGQERYASLAPLYYRGASAAVVVYDLTSKESFQKAQYWVKELQKHANAGIVLALVGNKA 147
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
DL + R V+ +EA+AYA+ N +FF E SAKTA N+N++F EIAKRLPR QP+
Sbjct: 148 DLDNLRTVSTDEARAYAESNSMFFTEASAKTAGNINELFEEIAKRLPRGQPS 199
>gi|221502146|gb|EEE27890.1| RAB, putative [Toxoplasma gondii VEG]
Length = 241
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 147/196 (75%), Gaps = 2/196 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K ++ KLVLLGD GKS LV+RF K +F E+QESTIGAAF +Q++ + VKFEIWDT
Sbjct: 41 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDT 100
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN-PNMVMALAGNKA 125
AGQERY SLAPMYYRGAAAA++VYDI+N+ SF+ AK WVQELQ+ + N+V+ALAGNK
Sbjct: 101 AGQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKE 160
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMV 184
DL R+V +EAQ YA E+G+ F+ETSAKT NVN++FYEIA LP+ + +P +G
Sbjct: 161 DLAAERQVPNQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALPKTRKEHDPHAGFQ 220
Query: 185 LMDRPGERTASASCCS 200
L ++++S+S C+
Sbjct: 221 LNKTQEQKSSSSSWCA 236
>gi|224113085|ref|XP_002316386.1| predicted protein [Populus trichocarpa]
gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222865426|gb|EEF02557.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 136/168 (80%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + TIGA+F SQT+A+ D+T +KFEIWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTIKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ +F +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 90 TAGQERYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R+V ++ YA++NG+FF+ETSAKTA N+N +F EIAKRLPR
Sbjct: 150 DLHEKREVPTQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 197
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++ D +TVKFEIW
Sbjct: 2 SKQYQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLEDGSTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT AS E+AK W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKAKTWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
DL + R+V EEAQ YA+E GL + ETSAKT VNDIF E+AK+LP+ P P G
Sbjct: 122 VDLEERRQVLQEEAQNYAKEEGLMWGETSAKTGLGVNDIFTELAKKLPQTAPPPQARG 179
>gi|225448984|ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
gi|147864853|emb|CAN79376.1| hypothetical protein VITISV_009584 [Vitis vinifera]
gi|296085986|emb|CBI31427.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 136/168 (80%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 29 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWD 88
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A++VYDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 89 TAGQERYAALAPLYYRGAAVAVVVYDITSPESFNKAQYWVKELQKHGSPDIVMALVGNKA 148
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R+V ++ YA++NG+FF+ETSAKTA N+N +F EIAKRLPR
Sbjct: 149 DLHENREVPVQDGIDYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 196
>gi|240976227|ref|XP_002402331.1| RAS-related protein, putative [Ixodes scapularis]
gi|215491138|gb|EEC00779.1| RAS-related protein, putative [Ixodes scapularis]
Length = 175
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 127/158 (80%), Gaps = 6/158 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ +++ TVKFEIWDTAGQER
Sbjct: 24 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTAGQER 83
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL R
Sbjct: 84 YHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADLASKR 143
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
V E ENGL FMETSAKTA NVNDIF I +
Sbjct: 144 AVELE------VENGLLFMETSAKTAMNVNDIFLAIGE 175
>gi|84626822|gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
Length = 200
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 136/168 (80%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 29 KNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWD 88
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A++VYDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 89 TAGQERYAALAPLYYRGAAVAVVVYDITSPESFAKAQYWVKELQKHGSPDIVMALVGNKA 148
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DL + R+VT ++ A++NG+FF+ETSAKTA N+N +F EIAKRLPR
Sbjct: 149 DLHEKREVTTQDGIDCAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 196
>gi|401400583|ref|XP_003880812.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
gi|325115224|emb|CBZ50779.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 241
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 145/196 (73%), Gaps = 2/196 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K ++ KLVLLGD GKS LV+RF K +F E+QESTIGAAF +Q++ + VKFEIWDT
Sbjct: 40 KTLHFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGSCIVKFEIWDT 99
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN-PNMVMALAGNKA 125
AGQERY SLAPMYYRGAAAA++VYDI+N+ SF+ AK WVQELQ + N+V+ALAGNK
Sbjct: 100 AGQERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQTVNDRSNVVIALAGNKE 159
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMV 184
DL R+V +EAQ YA E+G+ F+ETSAKT NVN++FYEIA LP+ + +P +G
Sbjct: 160 DLGAERQVPKQEAQQYADEHGILFIETSAKTGHNVNELFYEIAAALPKSRKEHDPHAGFQ 219
Query: 185 LMDRPGERTASASCCS 200
L ++++S S C+
Sbjct: 220 LNKTQEQKSSSGSWCA 235
>gi|325180967|emb|CCA15376.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 196
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 142/199 (71%), Gaps = 7/199 (3%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFE 62
T N + KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +QT+ ++D VKFE
Sbjct: 2 TSNNTCHFKLVLLGDTAVGKSCLVVRFVRDEFYEFQEPTIGAAFLTQTVNLSDGCAVKFE 61
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY SLAPMYYRGAAAAI+VYD+TN+ SF AK WV+ELQ +G+ N+V+ALAG
Sbjct: 62 IWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDSNVVIALAG 121
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
NKADL R VT EEA+ YA++NG+ +ETSAKT+ NV ++F IA LP+ N
Sbjct: 122 NKADLETRRAVTLEEARQYAEDNGILHLETSAKTSANVKNLFVAIATNLPQSNTQSNRDT 181
Query: 183 MVLMDRPGERTASAS--CC 199
L + TAS S CC
Sbjct: 182 FPL----AQPTASKSKGCC 196
>gi|389751301|gb|EIM92374.1| GTP-binding protein RAB5 [Stereum hirsutum FP-91666 SS1]
Length = 208
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIW 64
+K + KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 2 SKQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVNLDDGMTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
+DL R+VT EEAQ YA+E GL + ETSAK+ V+DIF IAK+LP PA + +G
Sbjct: 122 SDLAARRQVTQEEAQKYAEEEGLMWAETSAKSGEGVSDIFTAIAKKLPTTAPAASKTG 179
>gi|301091283|ref|XP_002895829.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262096540|gb|EEY54592.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 194
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 137/193 (70%), Gaps = 4/193 (2%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
K + KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +QT+ + D TVKFEIWD
Sbjct: 5 KTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQ +LAPMYYRGAAAAI+VYD+TN+ SF AK WV+ELQ +G+PN+V+ALAGNKA
Sbjct: 65 TAGQ---GNLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKA 121
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL RKV EEA YA++N + METSAKTA NV D+F IAKRLP+ P P +
Sbjct: 122 DLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPI 181
Query: 186 MDRPGERTASASC 198
++ S C
Sbjct: 182 TPPQASKSKSGCC 194
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 138/192 (71%), Gaps = 4/192 (2%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+N KLVLLGD GKSS V RFVK +F EFQ+ TIGAAF +QT+ + D VKFEIWDTAG
Sbjct: 7 LNFKLVLLGDAAVGKSSCVERFVKNEFFEFQQPTIGAAFLTQTIPLEDYIVKFEIWDTAG 66
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QERY SLAPMYYRGAAAA++VYDIT+ SF+ AK W+QELQ QG ++V+ LAGNK DL
Sbjct: 67 QERYRSLAPMYYRGAAAALVVYDITDPDSFDGAKTWIQELQRQGAADIVIGLAGNKLDLS 126
Query: 129 DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPNPSGMVLMD 187
RK+ ++EA+++A ENG F ETSAKT NV +IF IA++LP+ V P N +L +
Sbjct: 127 SQRKIDSKEAKSFADENGCIFYETSAKTGANVQEIFVAIAQKLPKNVLPPQNDHITILSN 186
Query: 188 RPGERTASASCC 199
E + CC
Sbjct: 187 ---EEKQNPGCC 195
>gi|449664040|ref|XP_002167518.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5C-like
[Hydra magnipapillata]
Length = 225
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 141/197 (71%), Gaps = 7/197 (3%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
N+ +++ LG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ +D TVKFEIWDTA
Sbjct: 30 NLIMQVIFLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCFDDTTVKFEIWDTA 89
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
GQERYHSLAPMYYRG+ AAI+VYDITN F + L N+V++LAGNKADL
Sbjct: 90 GQERYHSLAPMYYRGSQAAIVVYDITNTDLFAQVLHXAGCLAXXXXCNIVISLAGNKADL 149
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR--VQPAP-NPS--G 182
+ R V EEA AYA+ENGL FMETSAKTA+NVN++F IAK+LP+ QP P PS G
Sbjct: 150 GNKRMVDYEEAHAYAEENGLLFMETSAKTASNVNELFLAIAKKLPKNTDQPGPGGPSRRG 209
Query: 183 MVLMDRPGERTASASCC 199
+ L + P + CC
Sbjct: 210 IELTENP--EPPKSGCC 224
>gi|402222754|gb|EJU02820.1| GTP-binding protein RAB5 [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 135/189 (71%), Gaps = 1/189 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ + D T VKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDGTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR AA AI VYDIT AS E+AK W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRSAACAICVYDITQSASLEKAKSWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
+DL R+V+ EEAQ +A+E GL + ETSAKT VN+IF IA +LP V P G
Sbjct: 122 SDLAARRQVSQEEAQKFAEEEGLMWCETSAKTGEGVNEIFDRIAHKLPEVAPLQAQRGTA 181
Query: 185 LMDRPGERT 193
G R+
Sbjct: 182 AAKPAGARS 190
>gi|296491534|tpg|DAA33577.1| TPA: ras-related protein Rab-5A [Bos taurus]
Length = 160
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/147 (72%), Positives = 122/147 (82%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFM 150
KADL + R V +EAQ+YA +N L FM
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFM 160
>gi|168014172|ref|XP_001759627.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162689166|gb|EDQ75539.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|167832326|dbj|BAG09233.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 208
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+ + D+T VKFEIW
Sbjct: 28 SKNLRIKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTITLKDSTSVKFEIW 87
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAP+YYRGAAAA++VYDITN +F +A+ WV+ELQ GNP++VMAL GNK
Sbjct: 88 DTAGQERYASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNK 147
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
ADL R+VT EEAQ YA NG+F++ETSAKT+ NVN +F ++ +L +
Sbjct: 148 ADLEYQREVTREEAQTYADSNGMFYIETSAKTSDNVNQLFEQLHGKLKQ 196
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 141/193 (73%), Gaps = 11/193 (5%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEI 63
GN+ KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+A+++ TVKFEI
Sbjct: 14 GNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGN
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGN 133
Query: 124 KADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
K DL+ D R + +AQAYA+E GL F ETSAKTA NV ++F EIAK+LP Q P
Sbjct: 134 KLDLVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLDQVGPR 193
Query: 180 PSGMVLMDRPGER 192
+ RPG+R
Sbjct: 194 HA------RPGQR 200
>gi|320169835|gb|EFW46734.1| RAB5B [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 141/217 (64%), Gaps = 29/217 (13%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIE--------------------FQESTIGAAFFSQT 51
KLVLLG+ GKSSLVLRFVKGQF + Q+ +AF +QT
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHDRPAPLPLVGMLVLCDLLQQQQQQQQSPSAFLTQT 81
Query: 52 LAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ 111
+ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYD+TN +F RAK WV+ELQ Q
Sbjct: 82 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNADTFARAKTWVKELQRQ 141
Query: 112 GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
+PN+V+ALAGNKADL R V EEA AYA++NGL FMETSAKTA NVN+IF IAK+L
Sbjct: 142 ASPNIVIALAGNKADLSVKRVVEYEEAMAYAEDNGLLFMETSAKTAMNVNEIFLAIAKKL 201
Query: 172 PRVQP---------APNPSGMVLMDRPGERTASASCC 199
P+ SG V + G + A CC
Sbjct: 202 PKTDSRGPGGVAAPGGAQSGNVELKPDGAKAAGGKCC 238
>gi|56756264|gb|AAW26307.1| SJCHGC09085 protein [Schistosoma japonicum]
Length = 199
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 132/195 (67%), Gaps = 2/195 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND--ATVKFEIW 64
+N KLV+LG+ GKSS+V+R K QF E+QE+TIGAAF + + + D TVK EIW
Sbjct: 4 RNCQFKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKLEIW 63
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AA++VYD+TN+ SF RAK WV EL N V+ALAGNK
Sbjct: 64 DTAGQERYHSLAPMYYRGAQAAVVVYDVTNKDSFVRAKSWVNELNKNANTAKVIALAGNK 123
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL R V+ EEAQ YA +NGL FMETSAKTATNV ++F IA+RLP P SG
Sbjct: 124 VDLEAQRVVSHEEAQEYANQNGLLFMETSAKTATNVPELFTAIAQRLPHDIEPPRSSGAQ 183
Query: 185 LMDRPGERTASASCC 199
+ + CC
Sbjct: 184 QLTQNDSPAQQRQCC 198
>gi|302694753|ref|XP_003037055.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
gi|300110752|gb|EFJ02153.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
Length = 208
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+K+ KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D T VKFEIW
Sbjct: 2 SKHFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDGTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT S E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKARTWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
ADL R+VT EEAQ YA+E GL + ETSAKT V DIF IAK+LP P SG
Sbjct: 122 ADLAARRQVTQEEAQKYAEEEGLMWGETSAKTGEGVADIFTAIAKKLPLTAPPSARSG 179
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 141/193 (73%), Gaps = 11/193 (5%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEI 63
GN+ KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+A+++ TVKFEI
Sbjct: 14 GNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGN
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGN 133
Query: 124 KADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
K DL+ D R + +AQAYA+E GL F ETSAKTA NV ++F EIAK+LP Q P
Sbjct: 134 KLDLVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLDQVGPR 193
Query: 180 PSGMVLMDRPGER 192
+ RPG+R
Sbjct: 194 HA------RPGQR 200
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/184 (59%), Positives = 140/184 (76%), Gaps = 7/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++D+T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLDDSTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R ++ +A+AYA+E GL F ETSAK++TNV+++F IAK+LP Q P M
Sbjct: 139 NPDKRAISTADAEAYAREAGLLFFETSAKSSTNVHELFTAIAKKLPLDQAGPR--NMRTT 196
Query: 187 DRPG 190
RPG
Sbjct: 197 PRPG 200
>gi|403297081|ref|XP_003945248.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5B [Saimiri
boliviensis boliviensis]
Length = 342
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/158 (68%), Positives = 125/158 (79%), Gaps = 2/158 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKG F F AAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 146 KLVLLGESAVGKSSLVLRFVKGIFPSFL--LFIAAFLTQSVCLDDTTVKFEIWDTAGQER 203
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 204 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 263
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
V EEAQAYA +N L FMETSAKTA NVND+F I K
Sbjct: 264 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGK 301
>gi|351721304|ref|NP_001236437.1| uncharacterized protein LOC100305769 [Glycine max]
gi|255626561|gb|ACU13625.1| unknown [Glycine max]
Length = 203
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 133/164 (81%), Gaps = 1/164 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 29 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWD 88
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 89 TAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKA 148
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
DLL+ R+V ++ YA++NG+FF+ETSAKTA N+N++F E+ K
Sbjct: 149 DLLEKREVAVQDGTDYAEKNGMFFIETSAKTADNINELFEELPK 192
>gi|221052324|ref|XP_002257738.1| Rab5c GTPase [Plasmodium knowlesi strain H]
gi|193807569|emb|CAQ38074.1| Rab5c GTPase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 137/194 (70%), Gaps = 3/194 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK N+KLVLLGD GKS +V+RF K +F E+QESTIGAAF +Q + + + T+KFEIWD
Sbjct: 23 NKIFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWD 82
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGA+AA+IVYDITN+ SFE AK W+ EL++ + ++++ALAGNK
Sbjct: 83 TAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKK 142
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL R V E A+++A N + F+ETSAKT NVN++F IAK+LP + SG+ +
Sbjct: 143 DLEKNRVVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLQKEQDKFSGIQI 202
Query: 186 MDRPGERTASASCC 199
A CC
Sbjct: 203 ---SNTEEAKKKCC 213
>gi|167832328|dbj|BAG09234.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 131/160 (81%), Gaps = 1/160 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+K I KLVLLGD G GKS ++LRFV+GQF + T+GA+F SQT+++ D+T VKFEIW
Sbjct: 27 SKQIRIKLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIW 86
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAP+YYRGAAAA++VYDITN +F +A+ WV+ELQ GNP++VMAL GNK
Sbjct: 87 DTAGQERYASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNK 146
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
ADL + R+V+ EAQAYA+ NG+FF+ETSAKT+ NVN +F
Sbjct: 147 ADLENEREVSHAEAQAYAKSNGMFFIETSAKTSENVNQLF 186
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 140/184 (76%), Gaps = 8/184 (4%)
Query: 5 GNKNINA--KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKF 61
GN N A KLVLLG+ GKSSLVLRFVK QF +F+ESTIGAAF +QT++++D TVKF
Sbjct: 12 GNNNRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIGAAFLTQTISLDDNTTVKF 71
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERY SLAPMYYR A A++VYDIT +S ++AK+WV+ELQ Q N N+++ALA
Sbjct: 72 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQRQANENIIIALA 131
Query: 122 GNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
GNK DL+ D R +T +A+AYA+E GL F ETSAKT+ NV ++F IAK+LP Q
Sbjct: 132 GNKLDLVTAQPDKRAITTADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKLPLDQAG 191
Query: 178 P-NP 180
P NP
Sbjct: 192 PRNP 195
>gi|325183801|emb|CCA18260.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 211
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 141/197 (71%), Gaps = 3/197 (1%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFE 62
T K + KLVLLGD GKS LV+RFV+ +F E+QE TIGAAF +QT+ ++D VKFE
Sbjct: 17 TQRKTCHFKLVLLGDTAVGKSCLVVRFVRNEFFEYQEPTIGAAFLTQTVDLDDEVMVKFE 76
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY SLAPMYYRGAAAA++VYD+TN+ SF AK WV+ELQ +G+PN+V+ALAG
Sbjct: 77 IWDTAGQERYRSLAPMYYRGAAAAVVVYDVTNKDSFIGAKSWVKELQRRGDPNVVIALAG 136
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
NKADL RKV +EEA+ YA +N + +ETSAKTA NV D+F IAKRLP+ P
Sbjct: 137 NKADLESRRKVDSEEARQYALDNDILHLETSAKTANNVQDLFIAIAKRLPKNLPQQERET 196
Query: 183 MVLMDRPGERTASASCC 199
+ P T CC
Sbjct: 197 FPIT--PPITTKQRGCC 211
>gi|390604985|gb|EIN14376.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 208
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D ATVKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQATVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQTASLEKARTWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
DL R+VT EEAQ YA+E GL + E SAKT V+D+F IAK+LP P
Sbjct: 122 IDLAARRQVTQEEAQKYAEEEGLLWFEASAKTGEGVSDVFTAIAKKLPLTAP 173
>gi|156095051|ref|XP_001613561.1| small GTPase Rab5c [Plasmodium vivax Sal-1]
gi|148802435|gb|EDL43834.1| small GTPase Rab5c, putative [Plasmodium vivax]
Length = 214
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK N+KLVLLGD GKS +V+RF K +F E+QESTIGAAF +Q + + + T+KFEIWD
Sbjct: 23 NKVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWD 82
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGA+AA+IVYDITN+ SFE AK W+ EL++ + ++++ALAGNK
Sbjct: 83 TAGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKK 142
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL R V E A+++A N + F+ETSAKT NVN++F IAK+LP + + +
Sbjct: 143 DLEKNRVVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLHKKEQDKFSGIQ 202
Query: 186 MDRPGERTASASCC 199
++ E A CC
Sbjct: 203 INNTEE--AKKKCC 214
>gi|29841162|gb|AAP06175.1| similar to NM_002868 RAB5B, member RAS oncogene family in Homo
sapiens [Schistosoma japonicum]
Length = 214
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 128/178 (71%), Gaps = 2/178 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND--ATVKFEIW 64
+N KLV+LG+ GKSS+V+R K QF E+QE+TIGAAF + + + D TVK EIW
Sbjct: 4 RNCQFKLVILGESAVGKSSIVIRLCKSQFSEYQEATIGAAFMTHMVVLEDPPTTVKLEIW 63
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AA++VYD+TN+ SF RAK WV EL N V+ALAGNK
Sbjct: 64 DTAGQERYHSLAPMYYRGAQAAVVVYDVTNKDSFVRAKSWVNELNKNANTAKVIALAGNK 123
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
DL R V+ EEAQ YA +NGL FMETSAKTATNV ++F IA+RLP P SG
Sbjct: 124 VDLEAQRVVSHEEAQEYANQNGLLFMETSAKTATNVPELFTAIAQRLPHDIEPPRSSG 181
>gi|255630597|gb|ACU15658.1| unknown [Glycine max]
Length = 204
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 133/164 (81%), Gaps = 1/164 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
K++ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 29 KDLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWD 88
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 89 TAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKA 148
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
DLL+ R+V ++ YA++N +FF+ETSAKTA N+N++F EIAK
Sbjct: 149 DLLEKREVAVQDGTDYAEKNDMFFIETSAKTADNINELFEEIAK 192
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 141/193 (73%), Gaps = 11/193 (5%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEI 63
GN+ KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEI
Sbjct: 14 GNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGN
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGN 133
Query: 124 KADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
K DL+ D R V+ +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P
Sbjct: 134 KLDLVTEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQVGPR 193
Query: 180 PSGMVLMDRPGER 192
+ RPG+R
Sbjct: 194 HA------RPGQR 200
>gi|156083945|ref|XP_001609456.1| Ras-related protein Rab-5 [Babesia bovis T2Bo]
gi|154796707|gb|EDO05888.1| Ras-related protein Rab-5 [Babesia bovis]
Length = 222
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 133/171 (77%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+TG+ KLV+LGD GKSSLV RFVK F+EFQESTIGAAF +Q+++++D TVKFE
Sbjct: 25 STGHSFYQFKLVILGDTSVGKSSLVGRFVKNTFLEFQESTIGAAFMTQSVSLDDCTVKFE 84
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY +LAPMYYRG++AA+IVYDIT + SF++AK W+QELQA PN+V+ALAG
Sbjct: 85 IWDTAGQERYRTLAPMYYRGSSAAVIVYDITMRESFQQAKGWIQELQAHVGPNVVLALAG 144
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
NK DL +R+V+ E A+ +A N FMETSAK V ++F EIAK +P+
Sbjct: 145 NKVDLDSSREVSREVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIPK 195
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 138/186 (74%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 22 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 81
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 82 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVNE 141
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V+ +A+AYA+E GL F ETSAKTA NV D+F IAK+LP Q P +
Sbjct: 142 QPDKRAVSTADAEAYAREAGLLFFETSAKTAENVKDLFTAIAKKLPLDQAGPRHA----- 196
Query: 187 DRPGER 192
RPG+R
Sbjct: 197 -RPGQR 201
>gi|384493256|gb|EIE83747.1| ras protein [Rhizopus delemar RA 99-880]
Length = 208
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVK 60
+ T K KLVLLG+ GKSSLV+RFVK F E++ESTIGAAF +QT++++D TVK
Sbjct: 3 SNTQGKTYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVK 62
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERY SLAPMYYR A A+IVYDIT +S ++AK WV ELQ Q +PN+V+AL
Sbjct: 63 FEIWDTAGQERYKSLAPMYYRNANCAVIVYDITQASSLDKAKAWVNELQRQADPNIVIAL 122
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
AGNK+DL R + + AQ YA E GL F ETSAKTA NV+D+F IAKR+P Q A
Sbjct: 123 AGNKSDLGARRAIETKVAQEYADEAGLLFFETSAKTAENVHDLFLAIAKRMPLDQLA 179
>gi|256078265|ref|XP_002575417.1| rab5 [Schistosoma mansoni]
gi|353230408|emb|CCD76579.1| putative rab5 [Schistosoma mansoni]
Length = 179
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND--ATVKFEIWDTAGQ 69
KLV+LG+ GKSS+VLR VK QF E+QE+TIGAA+ +QT+ +ND ATVKFEIWDTAGQ
Sbjct: 8 KLVILGESAVGKSSIVLRLVKCQFSEYQEATIGAAYLTQTIVLNDPPATVKFEIWDTAGQ 67
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERYHSLAPMYYRGA AA++VYDITNQ SFERAK W+ ELQ + N + V+ALAGNK DL
Sbjct: 68 ERYHSLAPMYYRGAQAAVVVYDITNQNSFERAKSWINELQEKANTSGVIALAGNKVDLEG 127
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 167
R V+ EEAQ YA +N L FMETSAK +TNV+++F I
Sbjct: 128 QRAVSFEEAQEYADKNRLLFMETSAKISTNVSELFTAI 165
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 138/184 (75%), Gaps = 6/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEIWDTAGQE
Sbjct: 18 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQE 77
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS E+AK WV+ELQ Q N N+++ALAGNKADL+
Sbjct: 78 RYKSLAPMYYRNANCAVVVYDITQAASLEKAKAWVKELQRQANENIIIALAGNKADLVAE 137
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V+ +A+AYA+E GL F ETSAKTA NV ++F IAK+LP ++ A
Sbjct: 138 QPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVKELFTAIAKKLP-IEQATQRGMRGAA 196
Query: 187 DRPG 190
RPG
Sbjct: 197 GRPG 200
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D +TVKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQSTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
DL R+V+ EEAQ YA+E GL + ETSAKT V +IF IAK+LP P +G
Sbjct: 122 LDLAARRQVSQEEAQKYAEEEGLMWAETSAKTGEGVQEIFTAIAKKLPLTAPPSARAG 179
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/184 (59%), Positives = 138/184 (75%), Gaps = 7/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVTD 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V A +A+AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P +
Sbjct: 139 SPDKRAVQAADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPR--NLRSS 196
Query: 187 DRPG 190
RPG
Sbjct: 197 ARPG 200
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 145/200 (72%), Gaps = 12/200 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP-------RVQPAPN 179
D R + +A+AYA+E GL F ETSAKT++NV ++F IAK+LP ++ AP
Sbjct: 139 NPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLDQAGPRNMRTAPR 198
Query: 180 PSGMVLMDRPGERTASASCC 199
P + + PG ++ A C
Sbjct: 199 PGVDLRPEAPGTQSGGACNC 218
>gi|384483295|gb|EIE75475.1| hypothetical protein RO3G_00179 [Rhizopus delemar RA 99-880]
Length = 206
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 142/207 (68%), Gaps = 10/207 (4%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATV 59
MA G K KLVLLG+ GKSSLV+RFVK F E++ESTIGAAF +QT++++D TV
Sbjct: 1 MAQQG-KTYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTV 59
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
KFEIWDTAGQERY SLAPMYYR A A++VYDIT +S ++AK WV ELQ Q +PN+V+A
Sbjct: 60 KFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVNELQRQADPNIVIA 119
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
LAGNK+DL R + + AQ YA E GL F ETSAKTA NV+D+F IAKR+P Q A +
Sbjct: 120 LAGNKSDLGARRAIETKVAQEYADEAGLLFFETSAKTAENVHDLFLAIAKRMPLDQLADS 179
Query: 180 P--------SGMVLMDRPGERTASASC 198
S V ++ G S +C
Sbjct: 180 SRKTRNGLNSRGVDLENSGNNANSCAC 206
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 138/184 (75%), Gaps = 7/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P +
Sbjct: 139 NPDKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPR--NLRTT 196
Query: 187 DRPG 190
RPG
Sbjct: 197 PRPG 200
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 144/200 (72%), Gaps = 12/200 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP-------RVQPAPN 179
D R + +A+AYA+E GL F ETSAKT+TNV ++F IAK+LP ++ P
Sbjct: 139 HPDKRAIPTADAEAYAREAGLLFFETSAKTSTNVKELFAAIAKKLPLDQAGPRNLRTTPR 198
Query: 180 PSGMVLMDRPGERTASASCC 199
P + + PG + A A C
Sbjct: 199 PGVDLRPEAPGTQGAGACNC 218
>gi|403167509|ref|XP_003327295.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167062|gb|EFP82876.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 215
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/166 (63%), Positives = 129/166 (77%), Gaps = 1/166 (0%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDT 66
N KLVLLG+ GKSSLVLRFV+ F E++ESTIGAAF +QT+ +N+ T+KFEIWDT
Sbjct: 13 NYQFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVKINEQTTIKFEIWDT 72
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY SLAPMYYR A A++VYDIT+ AS E+AK W++ELQ Q + +V+ALAGNKAD
Sbjct: 73 AGQERYKSLAPMYYRNANCAVVVYDITSSASLEKAKVWIRELQKQADAQIVIALAGNKAD 132
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
L + R+V EEAQ +A+E L F ETSAK +TNV DIF IAK+LP
Sbjct: 133 LEERRQVPTEEAQRFAEEENLLFFETSAKDSTNVTDIFTAIAKKLP 178
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 138/186 (74%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF F+ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVNE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R ++ +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 141 QPDKRAISTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQVGPRHA----- 195
Query: 187 DRPGER 192
RPG+R
Sbjct: 196 -RPGQR 200
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 143/199 (71%), Gaps = 11/199 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTD 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A+AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P NP
Sbjct: 139 SPDKRAIQTVDAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRSNPR 198
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP A+ CS
Sbjct: 199 PGVDL-RPEAAGPQANSCS 216
>gi|71013586|ref|XP_758632.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
gi|46098290|gb|EAK83523.1| hypothetical protein UM02485.1 [Ustilago maydis 521]
Length = 221
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN-DATVKFEIWD 65
+ + KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++ TVKFEIWD
Sbjct: 9 RQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWD 68
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYR A A++VYDIT +S ++AK W++ELQ Q +PN+++ALAGNKA
Sbjct: 69 TAGQERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKA 128
Query: 126 DLLDARK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
DL R+ + EEA+ YAQE GL F+ETSAK ++NV+++F IA++LP Q A
Sbjct: 129 DLASTRRAIPTEEAEKYAQEEGLLFLETSAKNSSNVSELFTMIARKLPTEQAA 181
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 137/186 (73%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIVIALAGNKLDLVTE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R ++ +A+AYA+E GL F ETSAKTA NV +F IAK+LP Q P +
Sbjct: 141 QPDKRAISTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKLPLDQAGPRHA----- 195
Query: 187 DRPGER 192
RPG+R
Sbjct: 196 -RPGQR 200
>gi|343427700|emb|CBQ71227.1| probable GTP-binding protein ypt5 [Sporisorium reilianum SRZ2]
Length = 221
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN-DATVKFEIWD 65
+ + KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++ TVKFEIWD
Sbjct: 9 RQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWD 68
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYR A A++VYDIT +S ++AK W++ELQ Q +PN+++ALAGNKA
Sbjct: 69 TAGQERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKA 128
Query: 126 DLLDARK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
DL R+ + EEA+ YAQE GL F+ETSAK ++NV+++F IA++LP Q A
Sbjct: 129 DLASTRRAIPTEEAEKYAQEEGLLFLETSAKDSSNVSELFTMIARKLPLEQAA 181
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
Query: 1 MATTGN-KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATV 59
MA GN K K+VLLGD G GKSSLVLRFV F + ESTIGA+F S+ + VND +
Sbjct: 1 MADAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPI 60
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
K++IWDTAGQE+YHSLAPMYYRGAAAAI+VYDIT + S K WV+EL+ G N+V+A
Sbjct: 61 KYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIA 120
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+AGNK+DL + R+V A +A+AYA E G F+ETSAK TNV+D+F +I++ LP N
Sbjct: 121 IAGNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESN 180
Query: 180 PSGMVLMDRPGERTASASCC 199
++ G + S+ CC
Sbjct: 181 ALPEIVDPYGGGKKKSSGCC 200
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 141/194 (72%), Gaps = 11/194 (5%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFE 62
+ N+ KLVLLG+ GKSS+VLRFVK QF F+ESTIGAAF +QT+++++ T VKFE
Sbjct: 13 SNNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAG
Sbjct: 73 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAG 132
Query: 123 NKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
NK DL+ D R + A +A+AYA+E GL F ETSAKTA NV ++F IA++LP Q P
Sbjct: 133 NKLDLVTEQPDKRAIPAADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKLPLDQAGP 192
Query: 179 NPSGMVLMDRPGER 192
+ RPG+R
Sbjct: 193 RHA------RPGQR 200
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 144/199 (72%), Gaps = 11/199 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVMD 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A+AYA+E GL F ETSAK+ATNV ++F IAK+LP Q P NP
Sbjct: 139 SPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKLPLDQAGPRNLRSNPR 198
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP A+ CS
Sbjct: 199 PGVDL-RPEAAGPQANNCS 216
>gi|17066210|emb|CAD12439.1| Rab5c GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K N+KLVLLGD GKS +V+RF K +F E+QESTIGAAF +Q + + + T+KFEIWDT
Sbjct: 24 KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDT 83
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY SLAPMYYRGA+AA+IVYDITN+ SFE AK W+ EL++ + ++++ALAGNK D
Sbjct: 84 AGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKND 143
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L + R V E A+++A N + F+ETSAKT NVN++F IAK+LP + + +
Sbjct: 144 LEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLHKKEQEKCPAIQI 203
Query: 187 DRPGERTASASCC 199
+ E CC
Sbjct: 204 NNTEE--TKKKCC 214
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 135/184 (73%), Gaps = 11/184 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V EA+AYA+E GL F ETSAKTA NV D+F IAK+LP Q P +
Sbjct: 141 QPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKLPLDQAGPRHA----- 195
Query: 187 DRPG 190
RPG
Sbjct: 196 -RPG 198
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 146/200 (73%), Gaps = 12/200 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A+AYA+E GL F ETSAKT++NV ++F IAK+LP Q P NP
Sbjct: 139 NPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLDQAGPRNLRTNPR 198
Query: 182 GMVLM--DRPGERTASASCC 199
V + + PG + A++ C
Sbjct: 199 PGVDLRPEAPGTQGANSCQC 218
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 136/184 (73%), Gaps = 7/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKT TNV ++F IAK+LP Q P +
Sbjct: 139 NPDKRAIATADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKLPLDQAGPR--NLRTN 196
Query: 187 DRPG 190
RPG
Sbjct: 197 TRPG 200
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride IMI
206040]
Length = 220
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 137/186 (73%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF F+ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVNE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 141 QPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGPRHA----- 195
Query: 187 DRPGER 192
RPG+R
Sbjct: 196 -RPGQR 200
>gi|300175989|emb|CBK22206.2| unnamed protein product [Blastocystis hominis]
Length = 364
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 137/198 (69%), Gaps = 1/198 (0%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
+G + K+VLLG+ GKSS+V R+V+ QF++ QESTIGAAF SQT+ +++ VKF+I
Sbjct: 8 SGTQLFKYKIVLLGETAVGKSSIVQRYVRDQFLDNQESTIGAAFLSQTIKIDNDIVKFDI 67
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAG 122
WDTAGQERYHSLAPMYYRGA A+++YDIT++ +F RAK WV EL Q GNP+MV+ALAG
Sbjct: 68 WDTAGQERYHSLAPMYYRGAKGALVIYDITSRTTFARAKNWVTELKQNSGNPDMVIALAG 127
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
NK DL R+V E A+ YA+E+ + FME SAKT N++ IF +A+RLPR +
Sbjct: 128 NKCDLAMNREVPKELAEEYAKESNILFMEVSAKTKENIDLIFETLARRLPRTRTPVPSPT 187
Query: 183 MVLMDRPGERTASASCCS 200
+ P CC+
Sbjct: 188 TTPVVAPAPAETKKGCCN 205
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 138/184 (75%), Gaps = 7/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKT++NV ++F IAK+LP Q P +
Sbjct: 139 SPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVKELFTAIAKKLPLDQAGPR--NLRTT 196
Query: 187 DRPG 190
RPG
Sbjct: 197 PRPG 200
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 142/199 (71%), Gaps = 11/199 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVTD 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R V +A+AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P NP
Sbjct: 139 SPDKRAVQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRSNPR 198
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP A C+
Sbjct: 199 PGVDL-RPESANTQAGGCN 216
>gi|124505771|ref|XP_001350999.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
gi|23510642|emb|CAD49027.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K N+KLVLLGD GKS +V+RF K +F E+QESTIGAAF +Q + + + T+KFEIWDT
Sbjct: 24 KVFNSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDT 83
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY SLAPMYYRGA+AA+IVYDITN+ SFE AK W+ EL++ + ++++ALAGNK D
Sbjct: 84 AGQERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKND 143
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L + R V E A+++A N + F+ETSAKT NVN++F IAK+LP + + +
Sbjct: 144 LEEHRAVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLPLHKKEQERCPAIQI 203
Query: 187 DRPGERTASASCC 199
+ E CC
Sbjct: 204 NNTEE--TKKKCC 214
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 137/186 (73%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF F+ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 141 QPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQVGPRHA----- 195
Query: 187 DRPGER 192
RPG+R
Sbjct: 196 -RPGQR 200
>gi|255577452|ref|XP_002529605.1| protein with unknown function [Ricinus communis]
gi|223530938|gb|EEF32797.1| protein with unknown function [Ricinus communis]
Length = 224
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/159 (63%), Positives = 129/159 (81%), Gaps = 1/159 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + TIGA+F SQT+A+ D+T VKFEIWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+IVYDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 90 TAGQERYAALAPLYYRGAAVAVIVYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
DL D R+V ++ + YA++NG+FF+ETSAKTA N+N +F
Sbjct: 150 DLHDNREVPVQDGKEYAEKNGMFFIETSAKTADNINQLF 188
>gi|375152082|gb|AFA36499.1| small GTP-binding protein, partial [Lolium perenne]
Length = 188
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VK 60
+ T + + AKLVLLGD G GKS +VLRFV+GQF + T+GA+F SQTLA+ D+T VK
Sbjct: 12 SATDSNELRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVK 71
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERY +LAP+YYRGAAAAII YDITN SF++A+ WV+ELQ GN +++ L
Sbjct: 72 FEIWDTAGQERYAALAPLYYRGAAAAIIAYDITNPESFKKAQYWVKELQKHGNSGIIVVL 131
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
GNKADL ++R V +++AQ YA++N + FMETSAKTA N+N +F EIAKRLP+
Sbjct: 132 VGNKADLHESRSVASQDAQEYAEKNSMLFMETSAKTADNINQVFKEIAKRLPK 184
>gi|358055034|dbj|GAA98803.1| hypothetical protein E5Q_05491 [Mixia osmundae IAM 14324]
Length = 198
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 142/191 (74%), Gaps = 3/191 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVL+FVK +F E++ESTIGAAF +Q +++++ T+KFEIWDTAGQE
Sbjct: 8 KLVLLGESACGKSSLVLQFVKQEFSEYRESTIGAAFLTQIVSLDENTTIKFEIWDTAGQE 67
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYRGA AA++VYDIT++ + ++AK WV+ELQ Q +P++V+ALAGNK DL +
Sbjct: 68 RYRSLAPMYYRGAQAAVVVYDITSEGTLDKAKAWVKELQRQADPSIVIALAGNKVDLAET 127
Query: 131 RK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-GMVLMDR 188
R+ + E A+ YAQE GL F ETSAK ATNV ++F E+A ++P + A P G V +D
Sbjct: 128 RRAIPRETAEKYAQEEGLLFFETSAKEATNVTELFKELATKMPLDRAAAQPGRGRVDLDT 187
Query: 189 PGERTASASCC 199
+ + C
Sbjct: 188 SAKGPLDSCAC 198
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/184 (59%), Positives = 137/184 (74%), Gaps = 7/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 80 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVNE 139
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKTATNV ++F IAK+LP Q P +
Sbjct: 140 HPDKRAIQTADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKLPLDQAGPR--NLRSN 197
Query: 187 DRPG 190
RPG
Sbjct: 198 PRPG 201
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 136/184 (73%), Gaps = 7/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVTE 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKT TNV ++F IAK+LP Q P +
Sbjct: 139 NPDKRAIATADAEAYAKEAGLLFFETSAKTNTNVKELFTAIAKKLPLDQAGPR--NLRTN 196
Query: 187 DRPG 190
RPG
Sbjct: 197 ARPG 200
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEI 63
G++ KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A++D TVKFEI
Sbjct: 13 GSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDNTTVKFEI 72
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGN
Sbjct: 73 WDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIVIALAGN 132
Query: 124 KADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
K DL+ D R + A +A+ YA+E GL F ETSAKTA NV ++F IAK+LP Q P
Sbjct: 133 KLDLVTENPDKRAIPAADAEQYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGP 191
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 139/190 (73%), Gaps = 17/190 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQVSSLDKAKSWVKELQRQANENIIIALAGNKLDLVMD 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A+AYA+E GL F ETSAK+ATNV ++F IAK+LP Q P NP
Sbjct: 139 SPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKLPLDQAGPRNLRSNP- 197
Query: 182 GMVLMDRPGE 191
RPG
Sbjct: 198 ------RPGH 201
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 143/199 (71%), Gaps = 11/199 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTD 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A+AYA+E GL F ETSAK++TNV ++F IAK+LP Q P NP
Sbjct: 139 SPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKLPLDQAGPRNLRSNPR 198
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP A+ CS
Sbjct: 199 PGVDL-RPEAAGPQANGCS 216
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 137/186 (73%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 141 QPDKRAIPTADAEAYAREAGLLFFETSAKTAENVANLFTAIAKKLPLDQAGPRHA----- 195
Query: 187 DRPGER 192
RPG+R
Sbjct: 196 -RPGQR 200
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 134/175 (76%), Gaps = 6/175 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 80 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVTE 139
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-NP 180
D R +T E+A YA+E GL F ETSAKT+ NV ++F IAK+LP Q P NP
Sbjct: 140 QPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKLPLDQAGPRNP 194
>gi|406604593|emb|CCH43933.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 239
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 136/193 (70%), Gaps = 4/193 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSS+V RFVK F +F+ESTIGAAF +QT+ ++D T +KFEIWDTAGQE
Sbjct: 47 KLVLLGESAVGKSSVVHRFVKDSFDDFRESTIGAAFLTQTIQLDDTTTIKFEIWDTAGQE 106
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A AAI+VYDIT ++S ERAK W +ELQ Q N ++V+ALAGNK DL
Sbjct: 107 RYKSLAPMYYRNANAAIVVYDITQESSLERAKAWTKELQRQANQDIVIALAGNKVDLESQ 166
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP---RVQPAPNPSGMVLMD 187
R+V E A+ +A E GL F E SAK+ + +IF +IA++LP +++P + V +
Sbjct: 167 RQVPKEIAETFASEEGLLFFEVSAKSGEGIKEIFTKIAEKLPLESQLKPNRLQNKGVDLQ 226
Query: 188 RPGERTASASCCS 200
RP SCCS
Sbjct: 227 RPSTNNQKNSCCS 239
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 136/186 (73%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 20 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 80 RYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLDLVAE 139
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 140 QPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKLPLDQVGPRHT----- 194
Query: 187 DRPGER 192
RPG+R
Sbjct: 195 -RPGQR 199
>gi|443897405|dbj|GAC74746.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 221
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/168 (61%), Positives = 133/168 (79%), Gaps = 2/168 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN-DATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++ TVKFEIWDTAGQE
Sbjct: 13 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQE 72
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A A++VYDIT +S ++AK W++ELQ Q +PN+++ALAGNKADL
Sbjct: 73 RYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLAST 132
Query: 131 RK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
R+ V EEA+ YAQE L F+ETSAK ++NV+++F IA++LP Q A
Sbjct: 133 RRAVATEEAEKYAQEENLLFLETSAKDSSNVSELFTMIARKLPLEQAA 180
>gi|6010035|emb|CAB57221.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 126
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 110/126 (87%)
Query: 75 LAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVT 134
APMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMALAGNKADL D RKVT
Sbjct: 1 FAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVT 60
Query: 135 AEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTA 194
AEEA+ YA+ENGLFFMETSAKTA +VND+F+EIAKRLPR QP NP+GMVL+DRP E
Sbjct: 61 AEEARVYAEENGLFFMETSAKTAADVNDVFHEIAKRLPRAQPTQNPAGMVLVDRPAEGAR 120
Query: 195 SASCCS 200
+ASCCS
Sbjct: 121 AASCCS 126
>gi|32492054|gb|AAP85299.1| Rab5, partial [Babesia bovis]
Length = 208
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 131/171 (76%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+TG+ +LV+LGD GKSSL RFV+ F+EFQESTIGAAF +Q+++++D TVKFE
Sbjct: 11 STGHSFYQFELVILGDTSVGKSSLDGRFVRNTFLEFQESTIGAAFMTQSVSLDDCTVKFE 70
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY +LAPMYYRG++AA+IVYDIT SF++AK W+QELQA PN+V+ALAG
Sbjct: 71 IWDTAGQERYRTLAPMYYRGSSAAVIVYDITMHESFQQAKGWIQELQAHVGPNVVLALAG 130
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
NK DL +R+V+ E A+ +A N FMETSAK V ++F EIAK +P+
Sbjct: 131 NKVDLDSSREVSREVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIPK 181
>gi|328766761|gb|EGF76814.1| hypothetical protein BATDEDRAFT_37534 [Batrachochytrium
dendrobatidis JAM81]
Length = 245
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K I KLVLLG+ GKSSLVLRFV +F E +E TIGAAF +Q ++D +KFEIWDT
Sbjct: 33 KPIQVKLVLLGEAAVGKSSLVLRFVNNEFQENKEPTIGAAFLTQKCRLDDKIIKFEIWDT 92
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A AA++ YDIT AS E+AK WV+ELQ Q NPN+V+AL GNK D
Sbjct: 93 AGQERFHSLAPMYYRNAQAAVVAYDITKPASLEKAKAWVKELQRQANPNIVIALVGNKLD 152
Query: 127 L-LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
L AR V+ EEA+AYA E GL F+E SAKT V DIF +IAK++P
Sbjct: 153 LAATARGVSTEEARAYATEGGLLFLEASAKTGEFVMDIFTDIAKKIP 199
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 140/186 (75%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++AT VKFEIWDTAGQE
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDEATTVKFEIWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 80 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKLDLVTE 139
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-NP-SGMV 184
D R + +A+AYA+E GL F ETSAKT+ NV ++F IAK+LP Q P NP SG
Sbjct: 140 QQDKRVIQTADAEAYAKEAGLLFFETSAKTSENVRELFTAIAKKLPLDQAGPRNPRSG-- 197
Query: 185 LMDRPG 190
RPG
Sbjct: 198 --PRPG 201
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 134/175 (76%), Gaps = 6/175 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 80 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVTE 139
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-NP 180
D R +T E+A YA+E GL F ETSAKT+ NV ++F IAK+LP Q P NP
Sbjct: 140 QPDKRAITTEDASNYAREAGLLFFETSAKTSENVRELFTAIAKKLPLDQAGPRNP 194
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 136/186 (73%), Gaps = 10/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVAD 138
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V +A+AYA+E GL F ETSAKTA NV ++F IA++LP Q P
Sbjct: 139 NPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIARKLPLDQVGPRGHA---- 194
Query: 187 DRPGER 192
RPG+R
Sbjct: 195 -RPGQR 199
>gi|449298295|gb|EMC94310.1| hypothetical protein BAUCODRAFT_544119 [Baudoinia compniacensis
UAMH 10762]
Length = 227
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 141/194 (72%), Gaps = 8/194 (4%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFE 62
+G + KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A++D TVKFE
Sbjct: 12 SGTRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDQTTVKFE 71
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAG
Sbjct: 72 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAG 131
Query: 123 NKADLLDA----RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
NK DL ++ R + +A+AYA+E GL F ETSAKT+ NV ++F IAK+LP ++ A
Sbjct: 132 NKLDLAESDPSKRAIEKADAEAYAREAGLLFFETSAKTSENVKELFTAIAKKLP-IEQAS 190
Query: 179 NPSGM--VLMDRPG 190
GM RPG
Sbjct: 191 QRGGMRSAAGGRPG 204
>gi|167832330|dbj|BAG09235.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 130/159 (81%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+KN+ KLVLLGD G GKS ++LRFV+GQF + T+GA+F SQT+ + D+T+KFEIWD
Sbjct: 28 SKNLRIKLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTINLQDSTIKFEIWD 87
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAP+YYRGA+AA++VYDITN +F +A+ WV+ELQ GNP++VMAL GNKA
Sbjct: 88 TAGQERYSSLAPLYYRGASAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKA 147
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
DL R+V+ EEA AYA+ NG+FF+ETSAKTA NVN +F
Sbjct: 148 DLESEREVSREEALAYAESNGMFFIETSAKTADNVNQLF 186
>gi|392597767|gb|EIW87089.1| GTP-binding protein RAB5 [Coniophora puteana RWD-64-598 SS2]
Length = 224
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 135/194 (69%), Gaps = 17/194 (8%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K + KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 2 SKQLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIW 61
Query: 65 ----------------DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL 108
DTAGQERY SLAPMYYR A A++VYDIT AS E+A+ W++EL
Sbjct: 62 YVSNKSPATYSSIFDRDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIREL 121
Query: 109 QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
Q Q +P++V+AL GNK DL R+VT EEAQ YA+E GL + ETSAK+ V++IF IA
Sbjct: 122 QRQADPSIVIALCGNKTDLSARRQVTQEEAQKYAEEEGLMWGETSAKSGEGVSEIFTAIA 181
Query: 169 KRLPRVQPAPNPSG 182
K+LP P P SG
Sbjct: 182 KKLPTTAPPPARSG 195
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/184 (59%), Positives = 137/184 (74%), Gaps = 6/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNKADL+
Sbjct: 81 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKADLVAE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V+ +A+AYA+E L F ETSAKTA NV ++F IAK+LP ++ A
Sbjct: 141 QPDKRAVSTADAEAYAKEANLLFFETSAKTAENVKELFTAIAKKLP-IEQATQRGMRGAA 199
Query: 187 DRPG 190
RPG
Sbjct: 200 GRPG 203
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 142/205 (69%), Gaps = 19/205 (9%)
Query: 1 MATTG--------NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTL 52
MAT G N+ KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+
Sbjct: 1 MATRGPPGARGMSNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTI 60
Query: 53 AVND-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ 111
++++ TVKFEIWDTAGQERY SLAPMYYR A A++VYDIT S ++AK WV+ELQ Q
Sbjct: 61 SLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQ 120
Query: 112 GNPNMVMALAGNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 167
N N+++ALAGNK DL+ D R + +A+AYA+E GL F ETSAKTA NV ++F I
Sbjct: 121 ANENIIIALAGNKLDLVTEQPDKRAIETADAEAYAREAGLLFFETSAKTAENVQELFTAI 180
Query: 168 AKRLPRVQPAPNPSGMVLMDRPGER 192
AK+LP Q P + RPG+R
Sbjct: 181 AKKLPLDQVGPRHA------RPGQR 199
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 136/186 (73%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF F+ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A+IVYDIT +S ++AK WV+ELQ Q ++++ALAGNK DL+
Sbjct: 81 RYKSLAPMYYRNANCAVIVYDITQSSSLDKAKAWVKELQRQAKEDIIIALAGNKLDLVTE 140
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R + +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 141 QPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGPRHT----- 195
Query: 187 DRPGER 192
RPG+R
Sbjct: 196 -RPGQR 200
>gi|348668632|gb|EGZ08456.1| hypothetical protein PHYSODRAFT_565187 [Phytophthora sojae]
Length = 200
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
Query: 1 MATTGN-KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATV 59
MA GN K K+VLLGD G GKSSLVLRFV F + ESTIGA+F S+ + VND +
Sbjct: 1 MADAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPI 60
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
K++IWDTAGQE+YHSLAPMYYRGAAAAI+VYDIT + S K WV+EL+ G N+V+A
Sbjct: 61 KYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIA 120
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+AGNK+DL + R+V A +A+AYA+E G F+ETSAK TNV+D+F +I++ LP N
Sbjct: 121 IAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDTNVSDLFIQISQALPTASAESN 180
Query: 180 PSGMVLMDRPGERTASASCC 199
++ G + S CC
Sbjct: 181 ALPEIVDPYGGGKKKSGGCC 200
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 141/196 (71%), Gaps = 11/196 (5%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFE 62
+G++ KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFE
Sbjct: 14 SGSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFE 73
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAG
Sbjct: 74 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAG 133
Query: 123 NKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
NK DL+ D R + +A+ YA+E GL F ETSAKT+ NV ++F IAK+LP Q P
Sbjct: 134 NKLDLVTESPDKRAIQTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKLPLDQAGP 193
Query: 179 NPSGMVLMDRPGERTA 194
RPG++ A
Sbjct: 194 RNL------RPGQQRA 203
>gi|4678309|emb|CAB41100.1| small GTP-binding protein-like (fragment) [Arabidopsis thaliana]
Length = 224
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 130/169 (76%), Gaps = 1/169 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 28 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 87
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGA A+IVYDIT+ SF++A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 88 TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 147
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
DL + R+V E+ A++NG+FF+ETSAKTA N+N +F LP +
Sbjct: 148 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEVCTSFLPLI 196
>gi|388858617|emb|CCF47914.1| probable GTP-binding protein ypt5 [Ustilago hordei]
Length = 223
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 132/168 (78%), Gaps = 2/168 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN-DATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT++++ TVKFEIWDTAGQE
Sbjct: 13 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDTAGQE 72
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A A++VYDIT +S ++AK W++ELQ Q +PN+++ALAGNKADL
Sbjct: 73 RYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKADLAST 132
Query: 131 RK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
R+ + EEA YAQE L F+ETSAK ++NV+++F IA++LP Q A
Sbjct: 133 RRAIPTEEADKYAQEEELLFLETSAKDSSNVSELFTMIARKLPLEQAA 180
>gi|345560497|gb|EGX43622.1| hypothetical protein AOL_s00215g358 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 132/172 (76%), Gaps = 5/172 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEIWDTAGQE
Sbjct: 17 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQE 76
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N ++V+ALAGNK DL A
Sbjct: 77 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANESIVIALAGNKLDLATA 136
Query: 131 ----RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
R + +A+AYA+E GL F+ETSAKTA NV ++F IA++LP Q P
Sbjct: 137 NPSKRAIETADAEAYAKEAGLLFLETSAKTAENVQELFTAIARKLPTDQAGP 188
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 134/179 (74%), Gaps = 5/179 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEI 63
G++ KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEI
Sbjct: 13 GSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEI 72
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGN
Sbjct: 73 WDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGN 132
Query: 124 KADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
K DL+ D R ++ +A+ YA+E GL F ETSAKT NV ++F IAK+LP Q P
Sbjct: 133 KLDLVTESPDKRAISTADAEQYAREAGLLFFETSAKTCENVKELFTAIAKKLPIDQAGP 191
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEI 63
G++ KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEI
Sbjct: 14 GSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGN
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGN 133
Query: 124 KADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
K DL+ D R ++ +A+ YA+E GL F ETSAKT+ NV ++F IAK+LP Q P
Sbjct: 134 KLDLVTESPDKRAISTADAEQYAREAGLLFFETSAKTSENVKELFTAIAKKLPIDQAGP 192
>gi|145332843|ref|NP_001078287.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|222423401|dbj|BAH19672.1| AT3G54840 [Arabidopsis thaliana]
gi|332645778|gb|AEE79299.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 193
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 127/159 (79%), Gaps = 1/159 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGA A+IVYDIT+ SF++A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 90 TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
DL + R+V E+ A++NG+FF+ETSAKTA N+N +F
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188
>gi|149392024|gb|ABR25897.1| ras-related protein rhn1 [Oryza sativa Indica Group]
Length = 115
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/112 (91%), Positives = 105/112 (93%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A GNK NAKLVLLGDVGAGKSSLVLRFVKGQF+EFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3 ANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN
Sbjct: 63 EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGN 114
>gi|209880089|ref|XP_002141484.1| Ras family protein [Cryptosporidium muris RN66]
gi|209557090|gb|EEA07135.1| Ras family protein [Cryptosporidium muris RN66]
Length = 219
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 128/167 (76%), Gaps = 1/167 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
K + KLVLLGD GKS LV+RF K +F E+QE TIGAAF +Q++ ++D VKFEIWD
Sbjct: 10 KTYHLKLVLLGDASVGKSCLVVRFAKDEFSEYQEPTIGAAFMTQSVNIDDDYIVKFEIWD 69
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGAAAAI+VYDITN SF+ AK W+ EL++ N ++V+AL GNK
Sbjct: 70 TAGQERYRSLAPMYYRGAAAAIVVYDITNSDSFDGAKSWISELKSINNNDIVIALVGNKC 129
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
DL R V++E A+ YA+EN + ++ETSAKT NV +IF EIA++LP
Sbjct: 130 DLEGNRTVSSEIARCYAKENDILYLETSAKTGHNVQEIFEEIARKLP 176
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 136/184 (73%), Gaps = 6/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEIWDTAGQE
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNKADL+
Sbjct: 80 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKADLVAE 139
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V +A+AYA+E L F ETSAKTA NV ++F IAK+LP ++ A
Sbjct: 140 QPDKRAVPTADAEAYAREANLLFFETSAKTAENVKELFTAIAKKLP-IEQASQRGMRGAA 198
Query: 187 DRPG 190
RPG
Sbjct: 199 GRPG 202
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 136/184 (73%), Gaps = 6/184 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEIWDTAGQE
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNKADL+
Sbjct: 80 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKADLVAE 139
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V +A+AYA+E L F ETSAKTA NV ++F IAK+LP ++ A
Sbjct: 140 QPDKRAVPTTDAEAYAKEANLLFFETSAKTAENVKELFTAIAKKLP-IEQASQRGMRGAA 198
Query: 187 DRPG 190
RPG
Sbjct: 199 GRPG 202
>gi|170084457|ref|XP_001873452.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651004|gb|EDR15244.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 173
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTI AAF +QT+ ++D TVKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTI-AAFLTQTVTLDDQTTVKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 61 DTAGQERYKSLAPMYYRNANCAVVVYDITQTASLEKARTWIRELQRQADPSIVIALCGNK 120
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
+DL R+VT EEA+ YA E GL + ETSAKT V++IF IAK+LP P
Sbjct: 121 SDLAARRQVTEEEAKKYADEEGLMWAETSAKTGEGVSEIFTAIAKKLPLTAP 172
>gi|406693962|gb|EKC97301.1| GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 241
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 131/200 (65%), Gaps = 25/200 (12%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQT----LAVNDATVKFE 62
K + KLVLLG+ GKSSLVLRFV+ F E TIGAAF +QT + + VKFE
Sbjct: 7 KAVQVKLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGAAFLTQTDLPECRLENRVVKFE 66
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQER+HSLAPMYYR AAAA++VYDIT AS E+AK WV+ELQ Q NPN+V+AL G
Sbjct: 67 IWDTAGQERFHSLAPMYYRNAAAAVVVYDITKAASLEKAKAWVKELQRQANPNIVIALVG 126
Query: 123 NKADLLD---------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVN 161
NK DL++ AR+V EAQAYA E+GL F E SAKT TNV
Sbjct: 127 NKLDLVEGSSASESADAEADTPADDEETARQVPTSEAQAYATESGLLFFEASAKTGTNVQ 186
Query: 162 DIFYEIAKRLPRVQPAPNPS 181
++F EIAK +P AP P+
Sbjct: 187 EVFTEIAKTIPLDSIAPKPA 206
>gi|328856833|gb|EGG05952.1| hypothetical protein MELLADRAFT_116620 [Melampsora larici-populina
98AG31]
Length = 216
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 129/162 (79%), Gaps = 1/162 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFV+ F E++ESTIGAAF +QT+ ++D T+K+EIWDTAGQE
Sbjct: 16 KLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVQLDDQTTIKYEIWDTAGQE 75
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A A++VYDIT+ AS E+AK W++ELQ Q + +V+ALAGNKADL +
Sbjct: 76 RYKSLAPMYYRNANCAVVVYDITSSASLEKAKNWIRELQRQADSQIVIALAGNKADLEER 135
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
R+V+ +A+ +A+E L F ETSAK ATNV++IF IAK+LP
Sbjct: 136 RQVSTADARQFAEEENLLFFETSAKDATNVHEIFQAIAKKLP 177
>gi|323449295|gb|EGB05184.1| hypothetical protein AURANDRAFT_70339 [Aureococcus anophagefferens]
Length = 182
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 131/188 (69%), Gaps = 14/188 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD GKS LV+RFV+ +F EFQE TIGAAF +Q++++ ATVKFEIWDTAGQER
Sbjct: 9 KLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVSLEGATVKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYRGAAAAI+VYDITN+ SF AK WV+ELQ +G+PN+V+ALAGNKADL + R
Sbjct: 69 YRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVVIALAGNKADLPNKR 128
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
K + TSAK+ATNV +F EIA +LP+ P ++ P +
Sbjct: 129 KSVSST------------FTTSAKSATNVKSLFQEIALKLPQSPPQSEREAFPII--PPK 174
Query: 192 RTASASCC 199
+ +CC
Sbjct: 175 HAENKTCC 182
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 136/189 (71%), Gaps = 4/189 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GKSS+VLR K ++ EFQE+TIGAAF ++TL V+ T+KFEIWDTAGQER
Sbjct: 10 KIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQER 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSL PMYYRG+ AA++VYDIT+ +SF +AKKW+ EL+ GN V+ L GNK DL D+R
Sbjct: 70 YHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNE-AVIFLVGNKCDLADSR 128
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA-PNPSGMVLMDRPG 190
+T EEA+ YA+ + ++ETSAK NVN++F +IA++LPR + +P +V+ +
Sbjct: 129 VITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNEKGLIDPDEVVISNNKN 188
Query: 191 ERTASASCC 199
E CC
Sbjct: 189 EN--KKGCC 195
>gi|393246972|gb|EJD54480.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
++ KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ + D TVKFEIW
Sbjct: 2 SRQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDQTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY APMYYR A A++VYDIT +S E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYK--APMYYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPSIVIALCGNK 119
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
+DL R+VT EEAQ YA+E GL + ETSAKT V DIF IAK+LP P
Sbjct: 120 SDLAARRQVTQEEAQKYAEEEGLMWGETSAKTGEGVADIFTAIAKKLPLTAP 171
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 130/176 (73%), Gaps = 1/176 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
K ++ KLVLLGD GKS LV+RF K +F E+QE TIGAAF +Q++ V+D TVKFEIWD
Sbjct: 10 KTLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWD 69
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGAAAAI+VYDITN +F+ AK W+ ELQ N ++V+AL GNK
Sbjct: 70 TAGQERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKY 129
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
DL +R V +E A+ YA+E G+ ETSAKT NV ++F EIA++LP + + S
Sbjct: 130 DLESSRTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPNTKKLDSNS 185
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 128/170 (75%), Gaps = 1/170 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 65
K ++ KLVLLGD GKS LV+RF K +F E+QE TIGAAF +Q++ V+D TVKFEIWD
Sbjct: 10 KTLHLKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWD 69
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGAAAAI+VYDITN +F+ AK W+ ELQ N ++V+AL GNK
Sbjct: 70 TAGQERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKY 129
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ 175
DL +R V +E A+ YA+E G+ ETSAKT NV ++F EIA++LP +
Sbjct: 130 DLESSRTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPNTK 179
>gi|237842853|ref|XP_002370724.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211968388|gb|EEB03584.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
Length = 243
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K VLLGD GKSSLV+RFVK F + E+TIGAAFF+Q L V+ TVKFEIWDTAGQER
Sbjct: 42 KTVLLGDASVGKSSLVVRFVKNTFSDTMETTIGAAFFTQALQVDGRTVKFEIWDTAGQER 101
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SLAPMYYRGAAAAI+VYD +N ASF+RA+ WVQ+LQ GN N+V+ALA NK D L +
Sbjct: 102 FSSLAPMYYRGAAAAIVVYDQSNMASFDRAQVWVQQLQLSGNSNIVIALAANKMD-LPHK 160
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+V + YA+ENGL F+ETSAKT NV +F IA+RLP
Sbjct: 161 QVDLHLGRQYAEENGLLFIETSAKTGQNVQQLFSMIARRLP 201
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 130/173 (75%), Gaps = 6/173 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GKSS+VLR K ++ EFQE+TIGAAF ++TL V+ T+KFEIWDTAGQER
Sbjct: 10 KIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQER 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSL PMYYRG+ AA++VYDIT+ +SF +AKKW+ EL+ GN ++ L GNK DL D+R
Sbjct: 70 YHSLTPMYYRGSNAALVVYDITSDSSFTQAKKWIDELRGSGNEAIIF-LVGNKCDLADSR 128
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
+T EEA+ YA+ + ++ETSAK NVN++F +IA++LPR N G++
Sbjct: 129 VITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPR-----NEKGLI 176
>gi|395743828|ref|XP_003777995.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-5A-like
[Pongo abelii]
Length = 203
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 136/203 (66%), Gaps = 20/203 (9%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLR VKGQF EF+ESTIG T+KFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRSVKGQFHEFRESTIGV------------TLKFEI 61
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQE Y SLAPMYYRGA AAI+VYDITN+ SF RA V+ELQ Q P +V+AL+GN
Sbjct: 62 WDTAGQEXYRSLAPMYYRGAQAAIVVYDITNEESFARATNXVKELQRQACPGIVVALSGN 121
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG- 182
KADL + + V EAQ+YA +N L FM+TSAKT+ NVN++F IAK+LP+ +P NP
Sbjct: 122 KADLANKKAVDFXEAQSYADDNSLSFMKTSAKTSVNVNEMFMAIAKKLPKNEPQ-NPEAD 180
Query: 183 -----MVLMDRPGERTASASCCS 200
V + P + S CCS
Sbjct: 181 SARRRGVALTEPTQPNRS-QCCS 202
>gi|260946147|ref|XP_002617371.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
gi|238849225|gb|EEQ38689.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
Length = 213
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 135/203 (66%), Gaps = 14/203 (6%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q V D T+K+EIWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTVGDRTIKYEIWDTAGQ 68
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ SLAPMYYR A AA++VYDIT ASF +A+ WV+EL Q ++ +AL GNK DL+
Sbjct: 69 ERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQAAKDITIALVGNKYDLVA 128
Query: 130 A--------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA---P 178
A RKV+ E QA A+E GL F ETSAKT+ NVND+F I ++P +PA P
Sbjct: 129 ADNDTDESLRKVSVAEGQALAEEEGLLFFETSAKTSHNVNDVFVAIGSKIPEAKPADETP 188
Query: 179 NP---SGMVLMDRPGERTASASC 198
P SG + + G+R+ ++ C
Sbjct: 189 GPRGESGRIDLSGNGQRSGASDC 211
>gi|325188437|emb|CCA22973.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 198
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD G GKSSLVLRFV F + ESTIGA+F S+ + V + +K++IWDTAGQE+
Sbjct: 12 KVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEK 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGAAAAI+VYDIT + S K WV+EL+ G N+V+A+AGNK+DL D R
Sbjct: 72 YHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKR 131
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V + +A+AYA E G F+ETSAK TNV+D+F I+K+LP N +L D G
Sbjct: 132 EVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLPTAAAETNALPEIL-DPYGG 190
Query: 192 RTASASCC 199
CC
Sbjct: 191 VQQKNRCC 198
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 136/189 (71%), Gaps = 4/189 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GKSS+VLR K ++ EFQE+TIGAAF ++TL V+ T+KFEIWDTAGQER
Sbjct: 10 KIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQER 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSL PMYYRG+ AA++VYDIT+ +SF +AKKW+ EL+ GN ++ L GNK DL ++R
Sbjct: 70 YHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNEAIIF-LVGNKCDLDNSR 128
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA-PNPSGMVLMDRPG 190
+T EEA+ YA+ + ++ETSAK NVN++F +IA++LPR + +P +V+ +
Sbjct: 129 VITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNEKGLIDPDEVVISNNKN 188
Query: 191 ERTASASCC 199
E CC
Sbjct: 189 EN--KKGCC 195
>gi|384496634|gb|EIE87125.1| hypothetical protein RO3G_11836 [Rhizopus delemar RA 99-880]
Length = 234
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 131/183 (71%), Gaps = 12/183 (6%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
+ T K N KLVLLG+ GKSS+VLRFV Q++E +E TIGAAF +Q D ++KF
Sbjct: 13 SVTPGKMKNVKLVLLGESAVGKSSIVLRFVDRQYVENREPTIGAAFLNQKCNFKDRSIKF 72
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQER+HSLAPMYYR + AAI+VYDIT A+ ++AK WV+ELQ Q N ++V+AL
Sbjct: 73 EIWDTAGQERFHSLAPMYYRNSQAAIVVYDITKAATLDKAKSWVKELQRQANTDIVIALV 132
Query: 122 GNKADLLDA------------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
GNK DL++ R+V+ E+AQAYA E GL F ETSAK+A NV+++F IA+
Sbjct: 133 GNKLDLVEGEDGEPLEDEEHEREVSKEDAQAYADEAGLLFFETSAKSAQNVDNVFSSIAQ 192
Query: 170 RLP 172
++P
Sbjct: 193 KIP 195
>gi|395334748|gb|EJF67124.1| GTP-binding protein RAB5 [Dichomitus squalens LYAD-421 SS1]
Length = 209
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ + D TVKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT S E+AK W++ELQ Q +PN+V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKAKSWIRELQRQADPNIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL R+V+ EEA+ YA+E GL + ETSAKT V+DIF IAK+LP P P+ G
Sbjct: 122 LDLSARRQVSQEEAKKYAEEEGLMWGETSAKTGEGVSDIFTSIAKKLPLTAP-PSARGGT 180
Query: 185 LMDRPGERTA 194
PG RT
Sbjct: 181 RPGVPGGRTG 190
>gi|401412488|ref|XP_003885691.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325120111|emb|CBZ55665.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 244
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K VLLGD GKSSLV+RFVK F + E+TIGAAFF+Q L V+ TVKFEIWDTAGQER
Sbjct: 43 KTVLLGDASVGKSSLVVRFVKNTFSDTMETTIGAAFFTQALQVDGRTVKFEIWDTAGQER 102
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SLAPMYYRGAAAAI+VYD +N ASF+RA+ WVQ+LQ GN N+V+ALA NK D L +
Sbjct: 103 FSSLAPMYYRGAAAAIVVYDQSNMASFDRAQVWVQQLQLSGNSNIVIALAANKMD-LPHK 161
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+V + YA+ENGL F+ETSAKT NV +F IA+RLP
Sbjct: 162 QVDLNLGRQYAEENGLLFIETSAKTGQNVQQLFSMIARRLP 202
>gi|428671198|gb|EKX72116.1| Ras family Rab small STP-binding protein [Babesia equi]
Length = 257
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 4/196 (2%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K + KLV+LGD GKS +V RFVK +F++ Q+STIG+AF T+ V+DAT+ FEIWD
Sbjct: 64 DKVFHYKLVILGDAFVGKSCIVSRFVKDEFVD-QQSTIGSAFVKHTIKVDDATIIFEIWD 122
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAPMYYRG+AAAIIVYDIT + SF++AK W+QEL++ PN+V+ LAGNK
Sbjct: 123 TAGQERYRTLAPMYYRGSAAAIIVYDITVRDSFDQAKSWIQELKSYVEPNIVLGLAGNKV 182
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMV 184
DL D R V + + +A+ N FMETSAKT N+N +F E+A+++PR + + SG
Sbjct: 183 DLEDQRSVNLDIVKEFAKANDCIFMETSAKTGHNINKLFMELARKIPREKRVNDFQSGFR 242
Query: 185 LMDRPGERTASASCCS 200
+ R T + CC+
Sbjct: 243 IDFR--NTTTNLRCCT 256
>gi|336275989|ref|XP_003352748.1| hypothetical protein SMAC_01582 [Sordaria macrospora k-hell]
gi|380094637|emb|CCC08018.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 220
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 140/193 (72%), Gaps = 11/193 (5%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEI 63
GN+ KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEI
Sbjct: 14 GNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGN
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGN 133
Query: 124 KADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
K DL+ D R + +A AYA+E GL F ETSAKTA NV ++F EIAK+LP Q P
Sbjct: 134 KLDLVQEQPDKRAIQTADAAAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLDQVGPR 193
Query: 180 PSGMVLMDRPGER 192
+ RPG+R
Sbjct: 194 HA------RPGQR 200
>gi|432092944|gb|ELK25302.1| Histone acetyltransferase KAT2B [Myotis davidii]
Length = 846
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKV--TAEEA 138
KADL + R V AEE+
Sbjct: 134 KADLANKRAVDFQAEES 150
>gi|400602159|gb|EJP69784.1| RAB GTPase Ypt5 [Beauveria bassiana ARSEF 2860]
Length = 220
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 140/194 (72%), Gaps = 11/194 (5%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFE 62
+ N+ KLVLLG+ GKSS+VLRFVK QF F+ESTIGAAF +QT+++++ T VKFE
Sbjct: 13 SNNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFE 72
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAG
Sbjct: 73 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAG 132
Query: 123 NKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
NK DL+ D R + EA+AYA+E GL F ETSAKTA NV D+F IAK+LP Q P
Sbjct: 133 NKLDLVTEQPDKRAIPTAEAEAYAKEAGLLFFETSAKTAENVPDLFTAIAKKLPLDQAGP 192
Query: 179 NPSGMVLMDRPGER 192
+ RPG+R
Sbjct: 193 RHA------RPGQR 200
>gi|294950399|ref|XP_002786610.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239900902|gb|EER18406.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 226
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 125/164 (76%), Gaps = 3/164 (1%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV---NDATVKFEIWD 65
++ KLVLLGD GKS +V+RF +G+F E+QE TIGAAF +QT++ + +KFEIWD
Sbjct: 21 LHHKLVLLGDASVGKSCMVVRFARGEFYEYQEPTIGAAFMTQTVSPFPDSPVQIKFEIWD 80
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY SLAPMYYRGAAAA++VYDIT++ SFE AK+WV EL++ NP++V+A GNK+
Sbjct: 81 TAGQERYRSLAPMYYRGAAAAVVVYDITSRESFEGAKRWVNELRSSHNPDVVIAFCGNKS 140
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
DL + R+V + YAQEN L F+ETSAKT NV+ +F EI +
Sbjct: 141 DLAEEREVPTQRGAEYAQENDLLFVETSAKTGANVHHVFVEIGQ 184
>gi|255550050|ref|XP_002516076.1| protein with unknown function [Ricinus communis]
gi|223544981|gb|EEF46496.1| protein with unknown function [Ricinus communis]
Length = 161
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/141 (69%), Positives = 116/141 (82%), Gaps = 1/141 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
M GN+ I AKLVLLGDVG GK+SLVLRFVKGQF + QE TIGAAFF+Q L++ +ATVK
Sbjct: 1 MTKPGNRIIQAKLVLLGDVGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLAEATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDI++ +F RA+KWVQELQ QGNPN+VMAL
Sbjct: 61 FDIWDTAGQERYHSLAPMYYRGAAAALVVYDISSMDTFIRAQKWVQELQRQGNPNLVMAL 120
Query: 121 AGNKADLLDARKVTAEEAQAY 141
NK D LD+++ EA Y
Sbjct: 121 VANKFD-LDSKREVQNEALVY 140
>gi|302698433|ref|XP_003038895.1| hypothetical protein SCHCODRAFT_73684 [Schizophyllum commune H4-8]
gi|300112592|gb|EFJ03993.1| hypothetical protein SCHCODRAFT_73684 [Schizophyllum commune H4-8]
Length = 256
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 131/208 (62%), Gaps = 37/208 (17%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A +K++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++
Sbjct: 6 AGAADKSVQVKLVLLGEAAVGKSSVVLRFVSDEFQPNKEPTIGAAFLTQKCRLEDRVLRY 65
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQER+HSLAPMYYR A AA++VYDIT AS E+AK WV+ELQ Q NPN+V+ALA
Sbjct: 66 EIWDTAGQERFHSLAPMYYRNAQAAVVVYDITKAASLEKAKSWVKELQRQANPNIVIALA 125
Query: 122 GNKADLL--------------------DA-----------------RKVTAEEAQAYAQE 144
GNK DL+ DA R+V EEAQAYA E
Sbjct: 126 GNKVDLVQSAGSSSGGGNSSESEDEADDATATPGEAAAPDGSPESLRQVPREEAQAYATE 185
Query: 145 NGLFFMETSAKTATNVNDIFYEIAKRLP 172
GL F ETSAKT NVN +F EIAK++P
Sbjct: 186 AGLLFFETSAKTGENVNTVFTEIAKKIP 213
>gi|307105820|gb|EFN54068.1| hypothetical protein CHLNCDRAFT_25172 [Chlorella variabilis]
Length = 167
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 129/164 (78%), Gaps = 4/164 (2%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ +KLVLLG++G+GK+SLV RFV+GQ+ E QESTIGA+FF++T+ + VKFEIWDTAG
Sbjct: 6 VQSKLVLLGEMGSGKTSLVQRFVRGQYFENQESTIGASFFTKTIP--EKHVKFEIWDTAG 63
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADL 127
QERYHSLAPMYYRGAAAAI+VYD+T+ ASFERAKKWV EL Q NPN+++AL GNK DL
Sbjct: 64 QERYHSLAPMYYRGAAAAIVVYDVTHPASFERAKKWVWELRQNVQNPNLIIALVGNKVDL 123
Query: 128 L-DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
+AR V +A+ YA E GL F E SA T NV ++F E+A +
Sbjct: 124 AEEARAVPEADARTYAAETGLLFFEASAMTNVNVVELFDEVADK 167
>gi|255936341|ref|XP_002559197.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583817|emb|CAP91837.1| Pc13g07680 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 220
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 137/186 (73%), Gaps = 9/186 (4%)
Query: 12 KLVLLG-DVGA-GKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAG 68
KLVLL D+ A +SSLVLRFVK QF +++ESTIGAAF +QT++++D T VKFEIWDTAG
Sbjct: 19 KLVLLATDLTAIFQSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDDTTTVKFEIWDTAG 78
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QERY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 79 QERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLV 138
Query: 129 ----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
D R + +A+AYA+E GL F ETSAK++TNV ++F IAK+LP Q P M
Sbjct: 139 TESPDKRAIQEADAEAYAREAGLLFFETSAKSSTNVKELFTAIAKKLPLDQAGPR--NMR 196
Query: 185 LMDRPG 190
RPG
Sbjct: 197 ATPRPG 202
>gi|392579448|gb|EIW72575.1| hypothetical protein TREMEDRAFT_66953 [Tremella mesenterica DSM
1558]
Length = 246
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 131/212 (61%), Gaps = 34/212 (16%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T K + KLVLLG+ GKSSLVLRFV+ F E TIGAAF +Q + + VKFEI
Sbjct: 5 TPMKAVQVKLVLLGEAAVGKSSLVLRFVQNDFNENTSPTIGAAFLTQRCRLENRIVKFEI 64
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQER+HSLAPMYYR AAAA++VYDIT AS E+AK WV+ELQ Q NPN+++AL GN
Sbjct: 65 WDTAGQERFHSLAPMYYRNAAAAVVVYDITKSASLEKAKAWVKELQRQANPNIIIALVGN 124
Query: 124 KADLL----------------------------------DARKVTAEEAQAYAQENGLFF 149
K DL+ D+R+V+ EA+ YA+E GL F
Sbjct: 125 KLDLVSDTPSEPPTDGLEVERDEEDEETTPKPAEKTEEGDSRQVSIAEAETYAKECGLLF 184
Query: 150 METSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
E SAK TNVN++F EIAK +P +P P+
Sbjct: 185 FEASAKVGTNVNEVFTEIAKAIPLDTISPKPA 216
>gi|388579646|gb|EIM19967.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 231
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 131/191 (68%), Gaps = 21/191 (10%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+ K + KLVLLG+ GKSS+VLRFV+ F E++E TIGAAF +Q + D +KFE
Sbjct: 2 SESQKPVQVKLVLLGEAAVGKSSVVLRFVQNDFQEYKEPTIGAAFLTQKCRLEDKVIKFE 61
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQER+ SLAPMYYR A +A++VYDIT+ +SFE+AK WV+ELQ Q +PN+++AL G
Sbjct: 62 IWDTAGQERFRSLAPMYYRNALSAVVVYDITSSSSFEKAKSWVKELQRQASPNVIIALVG 121
Query: 123 NKADLLD---------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVN 161
NK DL++ +R ++ +EAQAYA+E+ L F ETSAKT V
Sbjct: 122 NKLDLVEGSQEEEEEERDDATATPNQDQSRAISRDEAQAYAEESNLLFFETSAKTGEGVV 181
Query: 162 DIFYEIAKRLP 172
++F EIAK++P
Sbjct: 182 EVFTEIAKKIP 192
>gi|327298001|ref|XP_003233694.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326463872|gb|EGD89325.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326470113|gb|EGD94122.1| RAB GTPase [Trichophyton tonsurans CBS 112818]
gi|326484352|gb|EGE08362.1| GTP-binding protein ypt5 [Trichophyton equinum CBS 127.97]
Length = 216
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 140/199 (70%), Gaps = 11/199 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ T VKFEIWDTAGQE
Sbjct: 18 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDTAGQE 77
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 78 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVNE 137
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P NP
Sbjct: 138 SPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRANPR 197
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP CS
Sbjct: 198 PGVDL-RPESANTQGGACS 215
>gi|315040105|ref|XP_003169430.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
gi|311346120|gb|EFR05323.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
Length = 216
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 140/199 (70%), Gaps = 11/199 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+++++ T VKFEIWDTAGQE
Sbjct: 18 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDTAGQE 77
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 78 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVNE 137
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P NP
Sbjct: 138 SPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRANPR 197
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP CS
Sbjct: 198 PGVDL-RPESANTQGGACS 215
>gi|310790093|gb|EFQ25626.1| Ras family protein [Glomerella graminicola M1.001]
Length = 221
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 139/186 (74%), Gaps = 11/186 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 22 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 81
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 82 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTE 141
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V+ EEA+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 142 QPDKRAVSTEEAEAYAREAGLLFFETSAKTAENVKELFTAIAKKLPLDQAGPRHA----- 196
Query: 187 DRPGER 192
RPG+R
Sbjct: 197 -RPGQR 201
>gi|409051991|gb|EKM61467.1| hypothetical protein PHACADRAFT_248102 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 140/192 (72%), Gaps = 8/192 (4%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+ D T VKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVALEDGTSVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY S APMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++++AL GNK
Sbjct: 62 DTAGQERYKSSAPMYYRNANCAVVVYDITQSASLEKARSWIRELQRQADPSIIIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
+DL R+V+ EEA+ YA+E GL + ETSAK+ VN+IF EIAK+LP+ P +G
Sbjct: 122 SDLAVRRQVSQEEAKKYAEEEGLMWGETSAKSGEGVNEIFTEIAKKLPKTAPPSARAG-- 179
Query: 185 LMDRPGERTASA 196
G RT +A
Sbjct: 180 -----GARTGAA 186
>gi|50550089|ref|XP_502517.1| YALI0D07128p [Yarrowia lipolytica]
gi|49648385|emb|CAG80705.1| YALI0D07128p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 125/177 (70%), Gaps = 4/177 (2%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K + KLVLLG+ GKSSLVLRFV +F E +E TIGAAF +Q D T+KFEIWDT
Sbjct: 6 KTTSVKLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCNFPDRTIKFEIWDT 65
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+ SLAPMYYR A A++VYDIT SF +A+ WV EL++Q +P +++AL GNK D
Sbjct: 66 AGQERFASLAPMYYRNAQTALVVYDITKPQSFIKARHWVSELKSQASPGIIIALVGNKRD 125
Query: 127 LLD----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
L+D ARKV +E + A+E GL F ETSAKT NV D+F IA+++P Q AP+
Sbjct: 126 LVDDDESARKVAEDEGKQLAEEEGLLFFETSAKTGLNVKDVFMAIAQKIPEEQKAPS 182
>gi|449551362|gb|EMD42326.1| GTP-binding protein RAB5 [Ceriporiopsis subvermispora B]
Length = 208
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 133/186 (71%), Gaps = 6/186 (3%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIW 64
+K KLVLLG++ ++L LRFVK QF +++ESTIGAAF +QT+ ++D+ TVKFEIW
Sbjct: 2 SKQYQFKLVLLGEMQIQYTTLFLRFVKDQFDDYRESTIGAAFLTQTVTLDDSSTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY APMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYK--APMYYRNANCAVVVYDITQAASLEKARSWIRELQRQADPSIVIALCGNK 119
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
+DL R+V+ EEA+ YA E GL + ETSAKT V DIF IAK+LP+ P PS
Sbjct: 120 SDLAARRQVSQEEAKKYADEEGLMWGETSAKTGEGVTDIFTAIAKKLPQTAP---PSARG 176
Query: 185 LMDRPG 190
RPG
Sbjct: 177 AASRPG 182
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 137/189 (72%), Gaps = 5/189 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GKSS+VLR KG++ EFQE+TIGAAF ++TL V+ T+KFE WDTAGQER
Sbjct: 10 KIVLLGDSSVGKSSIVLRVCKGEYKEFQENTIGAAFLTKTLIVDKDTIKFECWDTAGQER 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSL PMYYRG+ AA++V+DIT+ +S+ +AKKWV EL+ N M+ L GNK DL +R
Sbjct: 70 YHSLTPMYYRGSNAALVVFDITSDSSYAQAKKWVDELRESANDTMIF-LVGNKCDLEGSR 128
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA-PNPSGMVLMDRPG 190
VT E+A+AYA+ + ++ETSAK+ NV+++F +A++LP+ + + +V+ +R G
Sbjct: 129 SVTKEDAEAYARSISVDYIETSAKSNINVSELFDLVARKLPKTEKGLIDQDEVVISNRNG 188
Query: 191 ERTASASCC 199
++ CC
Sbjct: 189 QKKG---CC 194
>gi|164661221|ref|XP_001731733.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
gi|159105634|gb|EDP44519.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
Length = 220
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 122/163 (74%), Gaps = 2/163 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+ LRFVK QF +++ESTIGAAF +QT+ D AT+K EIWDTAGQE
Sbjct: 8 KLVLLGESSVGKSSVALRFVKDQFEDYRESTIGAAFLTQTVRRQDGATIKLEIWDTAGQE 67
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD- 129
RY SLAPMYYR A A++VYDIT Q SFE AK W++ELQ + N+ +AL GNK DL +
Sbjct: 68 RYKSLAPMYYRNAHCALVVYDITEQESFENAKSWIRELQRHADANITIALVGNKLDLAET 127
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+R V+AE+ Q YA GL FMETSAKT TNV ++F +A +LP
Sbjct: 128 SRTVSAEDGQKYADSEGLMFMETSAKTPTNVTELFTLVANKLP 170
>gi|291237548|ref|XP_002738700.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 217
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 124/160 (77%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+G+ G GKSSL +++V+G+F + ++TIGAAF S+TL V +A ++ +IWDTAG E+
Sbjct: 20 KLVLVGEAGVGKSSLAMQYVRGEFDKDMQTTIGAAFTSKTLHVENALIELQIWDTAGTEK 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLA MYYRGA AAI+VYDIT Q +F R WV+EL Q PN+ + LAGNKADL D R
Sbjct: 80 YHSLASMYYRGAHAAIVVYDITQQTTFLRVNSWVRELHRQATPNIAIILAGNKADLEDTR 139
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
KV+ E+AQAYA +N + F+ETSAKTA NV+D+F +A +L
Sbjct: 140 KVSCEDAQAYANDNSITFIETSAKTALNVDDLFSTLAIKL 179
>gi|217075522|gb|ACJ86121.1| unknown [Medicago truncatula]
Length = 181
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 28 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALRDSTTVKFEIWD 87
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGAA A+I YDIT+ SF +A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 88 TAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKA 147
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTA 157
DL R+V E+ YA++NG+FF+ETSAKTA
Sbjct: 148 DLQGKREVAVEDGMDYAEKNGMFFIETSAKTA 179
>gi|385302406|gb|EIF46539.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 208
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN-DATV 59
+A+ +K + KLVLLG+ GKSS+V RFVK F +F+ESTIGAAF +QT+ ++ D TV
Sbjct: 5 IASDEHKFVQFKLVLLGESAVGKSSIVQRFVKDSFNDFKESTIGAAFLTQTIDLDSDTTV 64
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
KFEIWDTAGQERY SLA +YYR A +A++VYDIT +AS ++AK W++ELQ Q + N+V+A
Sbjct: 65 KFEIWDTAGQERYRSLASIYYRNAQSALVVYDITQKASLDKAKYWIKELQKQASNNIVIA 124
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
L GNK DL + R++ EEAQA+A E GL F E SAK+ + D F EIA ++P
Sbjct: 125 LVGNKTDLEEERQIPTEEAQAFANEAGLLFFEVSAKSGKGIKDCFREIALKMP 177
>gi|84998852|ref|XP_954147.1| Rab5 GTPase [Theileria annulata]
gi|65305145|emb|CAI73470.1| Rab5 GTPase, putative [Theileria annulata]
Length = 255
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 123/166 (74%), Gaps = 10/166 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV+LGD GKS LV RFVK F+EFQESTIGAAF +QT+ ++D VKFEIWDTAGQER
Sbjct: 39 KLVILGDASVGKSCLVGRFVKNTFMEFQESTIGAAFMTQTVKLDDCNVKFEIWDTAGQER 98
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y +LAPMYYRG+AAAIIVYDIT + SF++AK W++EL++ PN+++ALAGNKADL D R
Sbjct: 99 YRTLAPMYYRGSAAAIIVYDITLKDSFDQAKSWIKELKSHVEPNIILALAGNKADLED-R 157
Query: 132 KVTAE---------EAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
KV + Q +A N FMETSAKT NV+ +F EIA
Sbjct: 158 KVDTDVRAFFNLLTMVQDFASANNCLFMETSAKTGQNVHKLFTEIA 203
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 136/204 (66%), Gaps = 16/204 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN---DATVKFEIWDTAG 68
KLVLLGD GKSS+V RFVK F EF+ESTIGAAF SQT+ + D T+KFEIWDTAG
Sbjct: 27 KLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKLEKHPDVTIKFEIWDTAG 86
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADL 127
QERY SLAPMYYR A AA+IVYD+T S +A+ WV+EL+ + G+ ++V+ LAGNK D+
Sbjct: 87 QERYKSLAPMYYRNANAALIVYDVTQPGSLVKAQSWVEELKNKVGDQDLVICLAGNKVDI 146
Query: 128 LD----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
D AR+V E+AQ YAQE GL F ETSAKT V+ IF EI +R+ + + PS
Sbjct: 147 CDEDATAREVQREDAQLYAQEQGLLFYETSAKTGAGVSAIFQEIGERVYQKKGMEVPSST 206
Query: 184 -------VLMDRPGERTASASCCS 200
V + RP S SCCS
Sbjct: 207 QARKPLNVELQRPSTND-STSCCS 229
>gi|384493359|gb|EIE83850.1| hypothetical protein RO3G_08555 [Rhizopus delemar RA 99-880]
Length = 238
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 123/175 (70%), Gaps = 12/175 (6%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSS+ LRFV Q+IE +E TIGAAF +Q + D +KFEIWDTAGQ
Sbjct: 25 HVKLVLLGESAVGKSSIALRFVNRQYIENREPTIGAAFLTQKCNLKDRCIKFEIWDTAGQ 84
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+HSLAPMYYR A AAI+VYDITN ++ ++AK WV+ELQ Q N ++V+AL GNK DL++
Sbjct: 85 ERFHSLAPMYYRNAQAAIVVYDITNASTLDKAKSWVKELQRQANTDIVIALVGNKLDLVE 144
Query: 130 A------------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV E+AQAYA E GL F ETSAK A NV+ +F I ++P
Sbjct: 145 GQDGEPLNDEEHERKVLKEDAQAYADEAGLLFFETSAKLAQNVDQVFGSIGHKIP 199
>gi|425765692|gb|EKV04360.1| RAB GTPase Ypt5, putative [Penicillium digitatum Pd1]
gi|425779183|gb|EKV17266.1| RAB GTPase Ypt5, putative [Penicillium digitatum PHI26]
Length = 242
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 143/217 (65%), Gaps = 32/217 (14%)
Query: 12 KLVLLGDVGAGK--------------------SSLVLRFVKGQFIEFQESTIGAAFFSQT 51
KLVLLG+ GK SSLVLRFVK QF +++ESTIGAAF +QT
Sbjct: 19 KLVLLGESAVGKVWDTTCDLLLSAADLTAIFQSSLVLRFVKDQFDDYRESTIGAAFLTQT 78
Query: 52 LAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQA 110
++++D T VKFEIWDTAGQERY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ
Sbjct: 79 ISLDDTTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQR 138
Query: 111 QGNPNMVMALAGNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYE 166
Q N N+V+ALAGNK DL+ D R + +A+AYA+E GL F ETSAK++TNV ++F
Sbjct: 139 QANENIVIALAGNKLDLVTESPDKRAIQEADAEAYAREAGLLFFETSAKSSTNVKELFTA 198
Query: 167 IAKRLP-------RVQPAPNPSGMVLMDRPGERTASA 196
IAK+LP ++ P P + + PG + A++
Sbjct: 199 IAKKLPLDQAGSRNLRATPRPGVDLRPEAPGTQGAAS 235
>gi|171694842|ref|XP_001912345.1| hypothetical protein [Podospora anserina S mat+]
gi|170947663|emb|CAP59825.1| unnamed protein product [Podospora anserina S mat+]
Length = 219
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 139/192 (72%), Gaps = 11/192 (5%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
N+ KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIW
Sbjct: 14 NRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIW 73
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNK 133
Query: 125 ADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
DL+ D R + EA+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P
Sbjct: 134 LDLVTEQPDKRAIPTAEAEAYAKEAGLLFFETSAKTAENVQELFTAIAKKLPLDQVGPRH 193
Query: 181 SGMVLMDRPGER 192
+ RPG+R
Sbjct: 194 A------RPGQR 199
>gi|149235389|ref|XP_001523573.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452982|gb|EDK47238.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 221
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 131/210 (62%), Gaps = 22/210 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D T+K+EIWDTAGQER
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AAI+VYDIT ASF +A+ WV+EL Q N ++++AL GNK DL++
Sbjct: 72 FASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDIIIALVGNKYDLVEDE 131
Query: 130 -------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-- 174
RKV+ EE QA A E GL F ETSAKT+ NVND+F I ++P
Sbjct: 132 PELESAAEGNTDLLRKVSKEEGQALADEEGLLFFETSAKTSYNVNDVFVAIGGKIPETNL 191
Query: 175 ----QPAPNPSGMV-LMDRPGERTASASCC 199
Q + N G + L P ++CC
Sbjct: 192 SRGAQESTNEGGRIDLSTNPNAGATRSTCC 221
>gi|169844272|ref|XP_001828857.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
gi|116509969|gb|EAU92864.1| GTP-binding protein ypt5 [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 132/208 (63%), Gaps = 37/208 (17%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
++ +K++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++
Sbjct: 5 SSPADKSVQVKLVLLGEAAVGKSSVVLRFVNNEFQPNKEPTIGAAFLTQKCRLEDRILRY 64
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQER+HSLAPMYYR A AA++VYD+T +S E+AK WV+ELQ Q NPN+V+ALA
Sbjct: 65 EIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKSWVKELQRQANPNIVIALA 124
Query: 122 GNKADLL--------------------DA-----------------RKVTAEEAQAYAQE 144
GNK DL+ DA R+V EEAQAYAQE
Sbjct: 125 GNKVDLVQPSSSSSGTGASSESEDEADDATATGGEAPASSAEPESLRQVPREEAQAYAQE 184
Query: 145 NGLFFMETSAKTATNVNDIFYEIAKRLP 172
GL F ETSAKT + +IF EIAK++P
Sbjct: 185 AGLLFFETSAKTGEGIVEIFTEIAKKIP 212
>gi|254566325|ref|XP_002490273.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|238030069|emb|CAY67992.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|328350666|emb|CCA37066.1| Ras-related protein ORAB-1 [Komagataella pastoris CBS 7435]
Length = 206
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+V RFV F + +ESTIGAAF +QT+ +++ T+KFEIWDTAGQE
Sbjct: 15 KLVLLGESAVGKSSIVHRFVTDSFDDLRESTIGAAFLTQTIQLDERTTIKFEIWDTAGQE 74
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A A++ YDIT ++S +RAK W+QELQ Q + ++V+AL GNK DL
Sbjct: 75 RYKSLAPMYYRNANCALVAYDITQESSLDRAKSWIQELQKQASADIVVALVGNKLDLEAE 134
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP---RVQPAPNPSGMVLMD 187
RKV+ +EA+ YA E GL F E SAKT + D+F+ IA +LP ++ A + ++
Sbjct: 135 RKVSTKEAKEYADELGLIFKEISAKTGEGIKDVFHSIASKLPVEEKLNSATKRRRNIDLN 194
Query: 188 RPGERTASASCC 199
RP + C
Sbjct: 195 RPSTNNQESCSC 206
>gi|170085289|ref|XP_001873868.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651420|gb|EDR15660.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 277
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 129/204 (63%), Gaps = 37/204 (18%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++EIWD
Sbjct: 29 DKSVQVKLVLLGEAAVGKSSVVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRILRYEIWD 88
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQER+HSLAPMYYR A AA++VYD+T +S E+AK WV+ELQ Q NPN+V+ALAGNK
Sbjct: 89 TAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKSWVKELQRQANPNIVIALAGNKV 148
Query: 126 DL-------------LDA------------------------RKVTAEEAQAYAQENGLF 148
DL LD+ R+V EEAQAYA E GL
Sbjct: 149 DLVQSSASSSGTSPSLDSEDEADDATATPGETPGSSGDPESLRQVPREEAQAYASEAGLL 208
Query: 149 FMETSAKTATNVNDIFYEIAKRLP 172
F ETSAKT + DIF EIAK++P
Sbjct: 209 FFETSAKTGEGIVDIFTEIAKKIP 232
>gi|302409676|ref|XP_003002672.1| GTP-binding protein ypt5 [Verticillium albo-atrum VaMs.102]
gi|261358705|gb|EEY21133.1| GTP-binding protein ypt5 [Verticillium albo-atrum VaMs.102]
Length = 241
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 130/175 (74%), Gaps = 11/175 (6%)
Query: 23 KSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYR 81
+SS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQERY SLAPMYYR
Sbjct: 53 QSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYR 112
Query: 82 GAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL----DARKVTAEE 137
A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+ D R V+ +
Sbjct: 113 NANCAVVVYDITQSSSLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVSTAD 172
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGER 192
A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P + RPG+R
Sbjct: 173 AEAYAKEAGLLFFETSAKTAENVRELFTAIAKKLPLDQVGPRHA------RPGQR 221
>gi|402586726|gb|EJW80663.1| Rab5 protein, partial [Wuchereria bancrofti]
Length = 146
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 109/131 (83%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIWD
Sbjct: 16 NKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AAI+VYDITNQ SF +AK WV+ELQ Q +PN+V+AL+GNKA
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 126 DLLDARKVTAE 136
DL + R V E
Sbjct: 136 DLANKRVVEYE 146
>gi|151337003|gb|ABS00941.1| GTP-binding protein RAB5 [Lentinula edodes]
Length = 207
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 142/204 (69%), Gaps = 11/204 (5%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ + D TVKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-------- 176
+DL R+V+ EEA+ YA+E GL + ETSAKT V++IF IAK+LP P
Sbjct: 122 SDLSARRQVSEEEAKKYAEEEGLMWAETSAKTGEGVSEIFTAIAKKLPLTAPPSARTGAG 181
Query: 177 -APN-PSGMVLMDRPGERTASASC 198
AP P + L +P + ++ C
Sbjct: 182 RAPTGPKSVDLNKQPAGQNSNEPC 205
>gi|396468450|ref|XP_003838176.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
gi|312214743|emb|CBX94697.1| hypothetical protein LEMA_P117000.1 [Leptosphaeria maculans JN3]
Length = 362
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 127/170 (74%), Gaps = 8/170 (4%)
Query: 17 GDVGAGKSSLVLRFVKG---QFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERY 72
G+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEIWDTAGQERY
Sbjct: 164 GESAVGKSSLVLRFVKACADQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERY 223
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL---- 128
SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 224 KSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVTESP 283
Query: 129 DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
D R +T +A+ YA+E GL F ETSAKT+ NV ++F IAK+LP Q P
Sbjct: 284 DKRAITTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKLPIDQSGP 333
>gi|320586194|gb|EFW98873.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 219
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 139/192 (72%), Gaps = 11/192 (5%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
N+ KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ T VKFEIW
Sbjct: 14 NRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDETTTVKFEIW 73
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNK 133
Query: 125 ADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
DL+ D R + EA+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P
Sbjct: 134 LDLVTEQPDKRAIPEAEAEAYAKEAGLLFFETSAKTAENVTELFTAIAKKLPLDQAGPGR 193
Query: 181 SGMVLMDRPGER 192
+ RPG+R
Sbjct: 194 A------RPGQR 199
>gi|353242503|emb|CCA74142.1| probable GTP-binding protein ypt5 [Piriformospora indica DSM 11827]
Length = 204
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 135/197 (68%), Gaps = 10/197 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D T++FEIWDTAGQE
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLDDQTTIRFEIWDTAGQE 67
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++++AL GNK DL
Sbjct: 68 RYKSLAPMYYRNANCAVVVYDITQSASLEKARSWIRELQRQADPSIIIALCGNKTDLEAR 127
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP---------NPS 181
R+VT EEA+ YA+E GL + E SAKT V DIF IAK+LP P P
Sbjct: 128 RQVTQEEAKKYAEEEGLMWCEASAKTGEGVQDIFMAIAKKLPLSAPQSQKGQARAGGQPR 187
Query: 182 GMVLMDRPGERTASASC 198
G+ L +P +C
Sbjct: 188 GVDLSSKPAAEQDGCNC 204
>gi|395835504|ref|XP_003790718.1| PREDICTED: ras-related protein Rab-5B [Otolemur garnettii]
Length = 258
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/132 (70%), Positives = 111/132 (84%)
Query: 45 AAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKW 104
AAF +Q++ ++D TVKFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RAK W
Sbjct: 98 AAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTW 157
Query: 105 VQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
V+ELQ Q +P++V+ALAGNKADL + R V EEAQAYA +N L FMETSAKTA NVND+F
Sbjct: 158 VKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF 217
Query: 165 YEIAKRLPRVQP 176
IAK+LP+ +P
Sbjct: 218 LAIAKKLPKSEP 229
>gi|402900351|ref|XP_003919574.1| PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase KAT2A
[Papio anubis]
Length = 954
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 99 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 158
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 159 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 218
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 219 ADLASKRAV 227
>gi|290986334|ref|XP_002675879.1| rab family small GTPase [Naegleria gruberi]
gi|284089478|gb|EFC43135.1| rab family small GTPase [Naegleria gruberi]
Length = 880
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
+ T K ++ KL+LLG GK++LVLRFV+G F E +ESTIGAAF +QT+ + D VKF
Sbjct: 5 SKTPPKFVSYKLILLGSSSTGKTNLVLRFVRGYFSEHEESTIGAAFLTQTVPLEDRVVKF 64
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDT+GQERY SL MY+RGA AA++VYDIT+ SF +A+KWV +Q QGN +V+ALA
Sbjct: 65 EIWDTSGQERYKSLPAMYFRGAYAALVVYDITDAESFIQAQKWVTLVQ-QGNSTLVIALA 123
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
GN A L D R+V EA+AYA+++ L FMETSA TA NVN+IF +A+++P
Sbjct: 124 GNNAHLEDKRQVETFEAKAYAEKHSLIFMETSANTAQNVNEIFTALARKMP 174
>gi|403419564|emb|CCM06264.1| predicted protein [Fibroporia radiculosa]
Length = 204
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/167 (59%), Positives = 124/167 (74%), Gaps = 6/167 (3%)
Query: 25 SLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYRGA 83
SLVLRFVK QF +++ESTIGAAF +QT+ + D TVKFEIWDTAGQERY SLAPMYYR A
Sbjct: 18 SLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDQTTVKFEIWDTAGQERYKSLAPMYYRNA 77
Query: 84 AAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQ 143
A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK+DL R+VT EEA+ YA
Sbjct: 78 NCAVVVYDITQTASLEKARSWIRELQRQADPSIVIALCGNKSDLAARRQVTEEEAKKYAD 137
Query: 144 ENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPG 190
E GL + ETSAKT V +IF IAK+LP+ P P+ G RPG
Sbjct: 138 EEGLMWCETSAKTGEGVQEIFTAIAKKLPQNAP-PSARG----GRPG 179
>gi|395334217|gb|EJF66593.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 138/225 (61%), Gaps = 41/225 (18%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
+++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++EIWDT
Sbjct: 11 RSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRVLRYEIWDT 70
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A AA++VYD+T +S E+AK WV+ELQ Q NPN+V+ALAGNK D
Sbjct: 71 AGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKTWVKELQRQANPNIVIALAGNKID 130
Query: 127 LL----------------------------------DARKVTAEEAQAYAQENGLFFMET 152
L+ R+V +EA+AYAQE GL F ET
Sbjct: 131 LVTPSASSSSAAAESEDEADDATATPGETATSGEPESLRQVPRDEAEAYAQEAGLLFFET 190
Query: 153 SAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASAS 197
SAKT V +IF EIAK++P Q +++ R G+R +AS
Sbjct: 191 SAKTGEGVVEIFTEIAKKIPIDQ-------ILVSSRGGQRPGAAS 228
>gi|409083629|gb|EKM83986.1| hypothetical protein AGABI1DRAFT_110587 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 209
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT +S E+A+ W++ELQ Q +PN+V+ L GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPNIVITLCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
+DL R+VT EEA+ YA+E GL + ETSAK+ V ++F IAK+LP SG
Sbjct: 122 SDLDARRQVTQEEAKKYAEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPSARSGAG 181
Query: 185 LMDRPGER 192
PG R
Sbjct: 182 SRTGPGAR 189
>gi|19114819|ref|NP_593907.1| GTPase Ypt5 [Schizosaccharomyces pombe 972h-]
gi|549812|sp|P36586.1|YPT5_SCHPO RecName: Full=GTP-binding protein ypt5
gi|396079|emb|CAA80223.1| ypt5 protein [Schizosaccharomyces pombe]
gi|2389005|emb|CAB11737.1| GTPase Ypt5 [Schizosaccharomyces pombe]
Length = 211
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTA 67
IN KLVLLGD GKSSLVLRFVK QF +++ESTIGAAF +QTL +++ T VK EIWDTA
Sbjct: 13 INQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTA 72
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
GQERY SLAPMYYR A AI+VYDIT AS E+AK W++ELQ Q +V+ALAGNK DL
Sbjct: 73 GQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDL 132
Query: 128 LDARK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
R+ V +A+AYA E L F ETSAKTA NVN++F IAK+LP
Sbjct: 133 AQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178
>gi|346972267|gb|EGY15719.1| GTP-binding protein ypt5 [Verticillium dahliae VdLs.17]
Length = 243
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 130/175 (74%), Gaps = 11/175 (6%)
Query: 23 KSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYR 81
+SS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQERY SLAPMYYR
Sbjct: 55 QSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYR 114
Query: 82 GAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL----DARKVTAEE 137
A A++VYDIT +S ++AK WV+ELQ Q N N+++ALAGNK DL+ D R V+ +
Sbjct: 115 NANCAVVVYDITQSSSLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVSTAD 174
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGER 192
A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P + RPG+R
Sbjct: 175 AEAYAKEAGLLFFETSAKTAENVRELFTAIAKKLPLDQVGPRHA------RPGQR 223
>gi|392578003|gb|EIW71131.1| hypothetical protein TREMEDRAFT_27089 [Tremella mesenterica DSM
1558]
Length = 198
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 138/199 (69%), Gaps = 7/199 (3%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
++ ++KLVLLG+ GKSSLVLRFV+ +F +F+ESTI AAF +QT+++++ T +KFEIW
Sbjct: 2 SRTTSSKLVLLGESAVGKSSLVLRFVRNEFSDFRESTI-AAFLTQTVSLDENTSIKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITN--QASFERAKKWVQELQAQGNPNMVMALAG 122
DTAGQERY SLAP+Y+R + AA+I YDIT + SFE+AK WV+ELQ Q +P++V+ L G
Sbjct: 61 DTAGQERYKSLAPIYFRNSNAAVIAYDITQPPETSFEKAKMWVRELQRQADPSIVIMLVG 120
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
NK DL + RK E + YAQE GL F E SAKT V +F EIA++LP P P G
Sbjct: 121 NKTDLENQRKTPREMGEKYAQEEGLLFAEASAKTGEGVEALFMEIARKLPLHTPTPRKPG 180
Query: 183 M--VLMDRPGERTASASCC 199
V + + E T SA C
Sbjct: 181 QQGVAVGK-EEETPSACTC 198
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL LLGD G GKSSLVLRFV F E ESTIGA+F S+TL V D T K++IWDTAGQE+
Sbjct: 10 KLCLLGDAGVGKSSLVLRFVADSFNENSESTIGASFMSKTLIVEDQTFKYQIWDTAGQEK 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y LAPMYYR AAAAIIVY+IT + SFE K WV+EL+ G N+++A+AGNK+DL R
Sbjct: 70 YRGLAPMYYRNAAAAIIVYEITRKQSFEALKHWVKELRQFGPSNIILAIAGNKSDLESQR 129
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA-PNPSGMV-LMDRP 189
+V+++EA+ YA F+ETSA TA NV+ +F ++KRLP+ A P P+ V L+D
Sbjct: 130 QVSSDEAKEYADSIDALFVETSALTADNVSYLFEALSKRLPQESIAQPKPASTVQLVDET 189
Query: 190 GERTASASC 198
+ + C
Sbjct: 190 PNKPKNEKC 198
>gi|119581212|gb|EAW60808.1| RAB5C, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 165
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 136 ADLASKRAV 144
>gi|342876816|gb|EGU78372.1| hypothetical protein FOXB_11123 [Fusarium oxysporum Fo5176]
Length = 225
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 133/191 (69%), Gaps = 16/191 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSS+VLRFVK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 80
Query: 71 RYHSLAPMYYRGAAAAIIVYD-----ITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
RY SLAPMYYR A A+I I QAS ++AK WV+ELQ Q N N+V+ALAGNK
Sbjct: 81 RYKSLAPMYYRNANCAVIYNHHRAMLIFLQASLDKAKAWVKELQRQANENIVIALAGNKL 140
Query: 126 DLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
DL+ D R + +A+AYA+E GL F ETSAKTA NV +F IAK+LP Q P +
Sbjct: 141 DLVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKLPLDQAGPRHA 200
Query: 182 GMVLMDRPGER 192
RPG+R
Sbjct: 201 ------RPGQR 205
>gi|448114201|ref|XP_004202515.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359383383|emb|CCE79299.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 8/179 (4%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 68
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ SLAPMYYR A AA++VYDIT ASF +A++WV+ELQ Q + ++ +AL GNK DL++
Sbjct: 69 ERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALVGNKYDLVE 128
Query: 130 A--------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
+ R V+ EE + A+E GL F ETSAKTA NVN++F +I K++P + P
Sbjct: 129 SDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPETLTSTRP 187
>gi|154312633|ref|XP_001555644.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 237
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 133/191 (69%), Gaps = 22/191 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQF---IEFQ-------------ESTIGAAFFSQTLAVN 55
KLVLLG+ GKSSLVLRFVK + EF+ ESTIGAAF +QT++++
Sbjct: 20 KLVLLGESAVGKSSLVLRFVKPGYDSNREFRMNKDHTADHTTDRESTIGAAFLTQTISLD 79
Query: 56 D-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP 114
+ TVKFEIWDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N
Sbjct: 80 ENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANE 139
Query: 115 NMVMALAGNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
N+++ALAGNK DL+ D R +T E+A YA+E GL F ETSAKT+ NV ++F IAK+
Sbjct: 140 NIIIALAGNKLDLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKK 199
Query: 171 LPRVQPAP-NP 180
LP Q P NP
Sbjct: 200 LPLDQAGPRNP 210
>gi|392570863|gb|EIW64035.1| GTP-binding protein RAB5 [Trametes versicolor FP-101664 SS1]
Length = 209
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 137/186 (73%), Gaps = 4/186 (2%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ + D+T VKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDSTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY SLAPMYYR A A++VYDIT S E+AK W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSLAPMYYRNANCAVVVYDITQSTSLEKAKSWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL R+V+ EEA+ YA+E GL + ETSAK+ V++IF IAK+LP + AP+ G
Sbjct: 122 LDLAARRQVSQEEAKKYAEEEGLMWGETSAKSGEGVSEIFNAIAKKLP-LTAAPSARGGA 180
Query: 185 LMDRPG 190
RPG
Sbjct: 181 --SRPG 184
>gi|254573032|ref|XP_002493625.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|238033424|emb|CAY71446.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|328354547|emb|CCA40944.1| Ras-like GTP-binding protein YPT1 [Komagataella pastoris CBS 7435]
Length = 218
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 134/215 (62%), Gaps = 20/215 (9%)
Query: 4 TGNKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+ NK I A KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D T+K+E
Sbjct: 2 SSNKQITAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCTIGDKTIKYE 61
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQER+ SLAPMYYR A AA++VYD+T SF +A+ WV EL Q + N+++AL G
Sbjct: 62 IWDTAGQERFQSLAPMYYRNAQAALVVYDVTKPKSFIKARHWVNELHEQASKNIIIALCG 121
Query: 123 NKADLLDA----------------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYE 166
NK D++++ RKV+ +E Q A + GL F ETSAKT NVN++F
Sbjct: 122 NKYDIVESEDNDVSTENEDDDSRKRKVSVQEGQTLADDEGLLFFETSAKTGFNVNEVFTT 181
Query: 167 IAKRLPRVQPAPNPSG---MVLMDRPGERTASASC 198
I K +P + N +G + L +R + ++C
Sbjct: 182 IGKHIPEATSSENAAGQERVDLTNRLDSSSTESTC 216
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 141/207 (68%), Gaps = 12/207 (5%)
Query: 6 NKNI-NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N N+ + KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + + + T+KFEIW
Sbjct: 2 NSNVASIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMGNQTIKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA++VYDIT SF +A+ WV+EL Q + ++++AL GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKSIIIALVGNK 121
Query: 125 ADLLDA---RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP-RVQPAPNP 180
DLL++ RKV EEA++ AQE GL F ETSAKT NVN++F I +++P + Q N
Sbjct: 122 LDLLESDEERKVAREEAESLAQEEGLLFFETSAKTGDNVNEVFLGIGEKIPLKQQEVQNG 181
Query: 181 SG-------MVLMDRPGERTASASCCS 200
+G V ++ G A++S C+
Sbjct: 182 NGASVNEVSRVDLNVAGSSGANSSGCN 208
>gi|390604100|gb|EIN13491.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 257
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 129/203 (63%), Gaps = 36/203 (17%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K++ KLVLLG+ GKSS+VLRFV F +E TIGAAF +Q + D +++EIWD
Sbjct: 10 DKSVQVKLVLLGEAAVGKSSVVLRFVSNDFQANKEPTIGAAFLTQKCRLEDRVLRYEIWD 69
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQER+HSLAPMYYR A AA++VYD+T +S E+AK WV+ELQ Q NPN+V+ALAGNK
Sbjct: 70 TAGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKSWVKELQRQANPNIVIALAGNKV 129
Query: 126 DLL------------------------DA------------RKVTAEEAQAYAQENGLFF 149
DL+ DA R+V A+EAQAYA E GL F
Sbjct: 130 DLVQQPSSSTPAADAEEDEADDATATPDADADAESSSPESLRQVPADEAQAYAAEAGLLF 189
Query: 150 METSAKTATNVNDIFYEIAKRLP 172
ETSAKT V ++F EIAK++P
Sbjct: 190 FETSAKTGEGVVEMFTEIAKKIP 212
>gi|321262867|ref|XP_003196152.1| GTPase [Cryptococcus gattii WM276]
gi|317462627|gb|ADV24365.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 199
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 136/194 (70%), Gaps = 8/194 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFV+ +F +F+ESTI AAF +Q++ ++++T +KFEIWDTAGQE
Sbjct: 8 KLVLLGESAVGKSSLVLRFVRNEFSDFRESTI-AAFLTQSVNLDESTTIKFEIWDTAGQE 66
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAP+Y+R + AA+IVYDIT Q SFE+AK WV+ELQ Q +P++V+ L GNK D+
Sbjct: 67 RYKSLAPIYFRNSNAAVIVYDIT-QTSFEKAKSWVRELQRQADPSIVIMLVGNKTDMDSQ 125
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP-----APNPSGMVL 185
RK + E + YA+E GL F E SAKT V ++F EIAK+LP P A G+ +
Sbjct: 126 RKTSREIGEQYAKEEGLLFAEASAKTGEGVEELFMEIAKKLPLAPPPQRGQATGGKGVKV 185
Query: 186 MDRPGERTASASCC 199
+ TASA C
Sbjct: 186 SGQEDSATASACTC 199
>gi|320581319|gb|EFW95540.1| Rab5-like GTPase [Ogataea parapolymorpha DL-1]
Length = 211
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 135/209 (64%), Gaps = 14/209 (6%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWD
Sbjct: 2 SKQTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCTIGTKTIKFEIWD 61
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQER+ +LAP+YYR A AA++VYD+T ASF +A+ WV+EL Q + N+V+AL GNK
Sbjct: 62 TAGQERFANLAPLYYRNAQAALVVYDVTKPASFIKARHWVKELHEQASKNIVIALVGNKY 121
Query: 126 DLL----------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP--- 172
DL+ R V+ EE +A A E GL F ETSAKTA NVN++F I K++P
Sbjct: 122 DLVVDSETGEEIEGRRSVSVEEGKALADEEGLLFFETSAKTAFNVNEVFTAIGKQIPEET 181
Query: 173 -RVQPAPNPSGMVLMDRPGERTASASCCS 200
+ Q P+ G + ++ P + + A C+
Sbjct: 182 SKPQDEPSSVGRIDLNAPVDESGGAGNCA 210
>gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113693|gb|EDO15242.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 127/175 (72%), Gaps = 4/175 (2%)
Query: 6 NKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N N+ + KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + ++D TVKFEIW
Sbjct: 2 NSNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIDDHTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA++VYD++ SF +A+ WV+ELQ + + ++++ALAGNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVSKPQSFIKARHWVKELQERASSDIIIALAGNK 121
Query: 125 ADLLD---ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
D+++ RKV EE Q A E GL F ETSAKT NVN++F I +++P +P
Sbjct: 122 VDIVEDGGERKVATEEGQKLADEEGLLFFETSAKTGQNVNEVFLAIGEKIPIKKP 176
>gi|115612989|ref|XP_790094.2| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 195
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL LLGD G GKSS+V RFV + E TIGA+F S+TLAV++ KF+IWDTAGQE+
Sbjct: 7 KLCLLGDSGVGKSSIVQRFVSDTYYESIPPTIGASFMSKTLAVDEKMYKFQIWDTAGQEK 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y LAPMYYRGAAAAI+VYDIT+QASF + + W++EL+ G N+V+++AGNK DL D R
Sbjct: 67 YRGLAPMYYRGAAAAIVVYDITSQASFSKVRDWIRELRQHGPENIVISIAGNKCDLEDLR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRPG 190
++ + A YA+E G F ETSAKTA N+ ++F I+K+LP P+ + V +
Sbjct: 127 EIPVKIAAEYAEEVGAVFTETSAKTAANIKELFIAISKKLPPEVLVPSYGTDTVNLRNQK 186
Query: 191 ERTASASCC 199
E+ CC
Sbjct: 187 EKKKRGRCC 195
>gi|399217553|emb|CCF74440.1| unnamed protein product [Babesia microti strain RI]
Length = 226
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 120/162 (74%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKS L RF K F+++Q+STIGAAF ++T+ + + VKFEIWDTAGQER
Sbjct: 49 KLVLLGETAVGKSCLTTRFCKDVFLDYQDSTIGAAFMTKTINLESSVVKFEIWDTAGQER 108
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYRGA+AA+IVYDIT+ +FE+A+ W+ EL+A ++++ALAGNK DL R
Sbjct: 109 YRSLAPMYYRGASAALIVYDITSADTFEQARSWINELKAVSRADVIIALAGNKVDLERNR 168
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
V E AQ +A+ N FMETSAKT NV ++F +IA LPR
Sbjct: 169 SVDIETAQNFAKLNNCLFMETSAKTGHNVQEMFMKIANLLPR 210
>gi|393218694|gb|EJD04182.1| GTP-binding protein ypt5 [Fomitiporia mediterranea MF3/22]
Length = 252
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 129/200 (64%), Gaps = 33/200 (16%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++EIWD
Sbjct: 10 DKSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRVLRYEIWD 69
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQER+HSLAPMYYR A AA++VYDIT AS E+AK WV+ELQ Q NPN+V+ALAGNK
Sbjct: 70 TAGQERFHSLAPMYYRNAQAAVVVYDITKMASLEKAKSWVKELQRQANPNIVIALAGNKL 129
Query: 126 DLL-----------DA----------------------RKVTAEEAQAYAQENGLFFMET 152
DL+ DA R+V +EA+ YA+E GL F ET
Sbjct: 130 DLVQPKSPATGGSSDAEDEPDDATATPGEAVAAESETLRQVPTDEAEMYAKEAGLLFFET 189
Query: 153 SAKTATNVNDIFYEIAKRLP 172
SAKT + ++F EIAK++P
Sbjct: 190 SAKTGEGIVELFTEIAKKIP 209
>gi|393240302|gb|EJD47829.1| GTP-binding protein ypt5 [Auricularia delicata TFB-10046 SS5]
Length = 255
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 130/208 (62%), Gaps = 37/208 (17%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A T +K+I KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++
Sbjct: 5 AATADKSIQVKLVLLGEAAVGKSSVVLRFVSNEFQANKEPTIGAAFLTQKCRLEDRVLRY 64
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQER+HSLAPMYYR A AA++VYD+T AS ++AK WV+ELQ Q NP++V+ALA
Sbjct: 65 EIWDTAGQERFHSLAPMYYRNAQAAVVVYDVTKAASLDKAKSWVKELQRQANPHIVIALA 124
Query: 122 GNKADLL----------DA---------------------------RKVTAEEAQAYAQE 144
GNK DL+ DA R V +EAQAYA E
Sbjct: 125 GNKVDLVAPSASSSSGEDAAASEDEPDDATATPGELAQAAGGPESLRAVPRDEAQAYASE 184
Query: 145 NGLFFMETSAKTATNVNDIFYEIAKRLP 172
GL F ETSAKT + ++F EIAK++P
Sbjct: 185 AGLLFFETSAKTGEGIVELFTEIAKKIP 212
>gi|6324663|ref|NP_014732.1| Vps21p [Saccharomyces cerevisiae S288c]
gi|549795|sp|P36017.1|VPS21_YEAST RecName: Full=Vacuolar protein sorting-associated protein 21;
AltName: Full=GTP-binding protein YPT51; AltName:
Full=Vacuolar protein-targeting protein 12
gi|441477|emb|CAA82543.1| VPS21 product [Saccharomyces cerevisiae]
gi|483567|emb|CAA53769.1| ypt51p [Saccharomyces cerevisiae]
gi|1164935|emb|CAA64010.1| YOR3154c [Saccharomyces cerevisiae]
gi|1420257|emb|CAA99285.1| VPS21 [Saccharomyces cerevisiae]
gi|151945713|gb|EDN63954.1| small GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190407421|gb|EDV10688.1| vacuolar protein sorting-associated protein 21 [Saccharomyces
cerevisiae RM11-1a]
gi|207341191|gb|EDZ69312.1| YOR089Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272985|gb|EEU07949.1| Vps21p [Saccharomyces cerevisiae JAY291]
gi|259149571|emb|CAY86375.1| Vps21p [Saccharomyces cerevisiae EC1118]
gi|285814973|tpg|DAA10866.1| TPA: Vps21p [Saccharomyces cerevisiae S288c]
gi|323302866|gb|EGA56670.1| Vps21p [Saccharomyces cerevisiae FostersB]
gi|323307162|gb|EGA60445.1| Vps21p [Saccharomyces cerevisiae FostersO]
gi|323331470|gb|EGA72885.1| Vps21p [Saccharomyces cerevisiae AWRI796]
gi|323335502|gb|EGA76787.1| Vps21p [Saccharomyces cerevisiae Vin13]
gi|323346523|gb|EGA80810.1| Vps21p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352075|gb|EGA84612.1| Vps21p [Saccharomyces cerevisiae VL3]
gi|349581251|dbj|GAA26409.1| K7_Vps21p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763044|gb|EHN04575.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296418|gb|EIW07520.1| Vps21p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 210
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 119/164 (72%), Gaps = 3/164 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + ++++AL GNK D+L
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 128
Query: 130 -ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV EE + A+E GL F ETSAKT NVND+F I +++P
Sbjct: 129 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
>gi|149029653|gb|EDL84824.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 154
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 107/125 (85%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAE 136
V E
Sbjct: 142 MVEYE 146
>gi|392571611|gb|EIW64783.1| GTP-binding protein ypt5 [Trametes versicolor FP-101664 SS1]
Length = 254
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 129/201 (64%), Gaps = 35/201 (17%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
+++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++EIWDT
Sbjct: 11 RSVQVKLVLLGEAAVGKSSIVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRVLRYEIWDT 70
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A AA++VYD+T +S E+AK WV+ELQ Q NPN+V+ALAGNK D
Sbjct: 71 AGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKTWVKELQRQANPNIVIALAGNKID 130
Query: 127 LL-------------------DA----------------RKVTAEEAQAYAQENGLFFME 151
L+ DA R+V +EA+AYAQE GL F E
Sbjct: 131 LVTPSASSSSSTTAESEDEADDATATPGETATSGEPESLRQVPRDEAEAYAQEAGLLFFE 190
Query: 152 TSAKTATNVNDIFYEIAKRLP 172
TSAKT V +IF EIAK++P
Sbjct: 191 TSAKTGDGVVEIFTEIAKKIP 211
>gi|336376939|gb|EGO05274.1| hypothetical protein SERLA73DRAFT_174346 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389987|gb|EGO31130.1| hypothetical protein SERLADRAFT_455824 [Serpula lacrymans var.
lacrymans S7.9]
Length = 211
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D +TVKFEIW
Sbjct: 2 SKQYQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQSTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY S APMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK
Sbjct: 62 DTAGQERYKSQAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNK 121
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
DL R+VT EEA+ YA+E GL + ETSAK+ V DIF IAK+LP P
Sbjct: 122 TDLSARRQVTQEEAKKYAEEEGLMWGETSAKSGEGVADIFTAIAKKLPLTAAPP 175
>gi|401623607|gb|EJS41700.1| vps21p [Saccharomyces arboricola H-6]
Length = 210
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 119/164 (72%), Gaps = 3/164 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + ++++AL GNK D+L
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKVDMLQEG 128
Query: 130 -ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV EE + A+E GL F ETSAKT NVND+F I +++P
Sbjct: 129 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
>gi|403217405|emb|CCK71899.1| hypothetical protein KNAG_0I01080 [Kazachstania naganishii CBS
8797]
Length = 253
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 126/179 (70%), Gaps = 7/179 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+V GKSS+VLRFV F E +E TIGAAF +Q + +N+ T+KFEIWDTAGQER
Sbjct: 9 KLVLLGEVAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNINEHTIKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + ++++AL GNK D+LD
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLDED 128
Query: 130 --ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP---NPSGM 183
RKV EE + AQE L F ETSAKT NVN++F +I + +P Q A N SG+
Sbjct: 129 PTERKVAREEGEKLAQEENLLFFETSAKTGANVNEVFLKIGENVPLKQAADGSNNGSGL 187
>gi|388454460|ref|NP_001253365.1| ras-related protein Rab-31 [Macaca mulatta]
gi|402902630|ref|XP_003914202.1| PREDICTED: ras-related protein Rab-31-like [Papio anubis]
gi|380809112|gb|AFE76431.1| ras-related protein Rab-31 [Macaca mulatta]
gi|384945010|gb|AFI36110.1| ras-related protein Rab-31 [Macaca mulatta]
Length = 194
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 129/188 (68%), Gaps = 1/188 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N + + + +P
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGIKLVKPTS 187
Query: 192 RTASASCC 199
+ AS CC
Sbjct: 188 Q-ASRRCC 194
>gi|344229410|gb|EGV61296.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229411|gb|EGV61297.1| hypothetical protein CANTEDRAFT_116954 [Candida tenuis ATCC 10573]
Length = 213
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 132/203 (65%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D T+K+EIWDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDKTIKYEIWDTAGQER 70
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYDIT ASF +A+ WV+EL Q + ++ +AL GNK DL++
Sbjct: 71 FASLAPMYYRNAQAALVVYDITKPASFLKARHWVKELHEQASKDITIALVGNKYDLVEDE 130
Query: 130 -----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR------VQPAP 178
RKV+ EE Q A++ GL F ETSAKT+ NVN++F I ++P VQ A
Sbjct: 131 NDGDTLRKVSVEEGQKLAEDEGLLFFETSAKTSYNVNEVFVGIGTKIPESSAPTGVQQAG 190
Query: 179 NPSGMVLMDRPGERTA--SASCC 199
N +G + + T ++ CC
Sbjct: 191 NEAGRIDLTTGAASTTQQTSGCC 213
>gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family variant [Homo sapiens]
Length = 195
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G V +++P
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTVKVEKPT 187
Query: 191 ERTASASCC 199
+ AS CC
Sbjct: 188 MQ-ASRRCC 195
>gi|26350195|dbj|BAC38737.1| unnamed protein product [Mus musculus]
gi|74190579|dbj|BAE25935.1| unnamed protein product [Mus musculus]
gi|148692651|gb|EDL24598.1| RAB5B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 168
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/132 (70%), Positives = 109/132 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 ADLLDARKVTAE 136
ADL + R V E
Sbjct: 135 ADLANKRMVEYE 146
>gi|116004109|ref|NP_001070412.1| ras-related protein Rab-31 [Bos taurus]
gi|115305074|gb|AAI23832.1| RAB31, member RAS oncogene family [Bos taurus]
Length = 195
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N SG + + +P
Sbjct: 128 EVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGSIKLGKPT 187
Query: 191 ERTASASC 198
+ C
Sbjct: 188 SQVGRRCC 195
>gi|55962806|emb|CAI11700.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 145
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/122 (75%), Positives = 106/122 (86%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+V+DIT +FERAK WV+ELQ Q +PN+V+ALAGNKADL D R
Sbjct: 82 YHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADKR 141
Query: 132 KV 133
V
Sbjct: 142 LV 143
>gi|351699897|gb|EHB02816.1| Ras-related protein Rab-5C [Heterocephalus glaber]
Length = 209
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 119/173 (68%), Gaps = 7/173 (4%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIG F +
Sbjct: 15 VGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGGGSFEGRCLCSSGAPSL-- 72
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
Q H LAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +P++V+ALAGN
Sbjct: 73 -----QPGPHCLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPSIVIALAGN 127
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
KADL R V +EAQAYA++N L FMETSAKTA NVN+IF IAK+LP+ +P
Sbjct: 128 KADLAPKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 180
>gi|448111644|ref|XP_004201890.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359464879|emb|CCE88584.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 8/179 (4%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 68
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ SLAPMYYR A AA++VYDIT ASF +A++WV+ELQ Q + ++ +AL GNK DL++
Sbjct: 69 ERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALVGNKYDLVE 128
Query: 130 A--------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
+ R V+ EE + A+E GL F ETSAKTA NVN++F +I K++P + P
Sbjct: 129 SDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPENLTSNRP 187
>gi|52077019|dbj|BAD46052.1| putative GTP binding protein [Oryza sativa Japonica Group]
Length = 226
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 110/131 (83%)
Query: 40 ESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFE 99
ESTIGAAFFSQ L +++ATVK +IWDTAGQERYHSLAPMYYRGAAAA++VYDI++ S+
Sbjct: 21 ESTIGAAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSTDSYI 80
Query: 100 RAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATN 159
RA+KWV ELQ QGNP++VMAL GNK DL + R+V +EA YA+ NGLFF+ETSAKT+ N
Sbjct: 81 RARKWVDELQRQGNPHLVMALVGNKVDLEEKRQVGTQEAMEYAERNGLFFIETSAKTSQN 140
Query: 160 VNDIFYEIAKR 170
V ++FYE+ K
Sbjct: 141 VTELFYELGKH 151
>gi|345803388|ref|XP_850610.2| PREDICTED: ras-related protein Rab-31 [Canis lupus familiaris]
Length = 195
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + +P
Sbjct: 128 EVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKP- 186
Query: 191 ERTASASCC 199
AS CC
Sbjct: 187 PTPASRRCC 195
>gi|189202136|ref|XP_001937404.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984503|gb|EDU49991.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 218
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 122/160 (76%), Gaps = 5/160 (3%)
Query: 24 SSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYRG 82
SSLVLRFVK QF +++ESTIGAAF +QT+A+++ TVKFEIWDTAGQERY SLAPMYYR
Sbjct: 30 SSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDTAGQERYKSLAPMYYRN 89
Query: 83 AAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL----DARKVTAEEA 138
A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+ D R ++ +A
Sbjct: 90 ANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKLDLVTESPDKRAISTADA 149
Query: 139 QAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
+ YA+E GL F ETSAKT NV ++F IAK+LP Q P
Sbjct: 150 EQYAREAGLLFFETSAKTCENVKELFTAIAKKLPIDQAGP 189
>gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 196
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPT 187
Query: 191 ERTASASCC 199
+ AS CC
Sbjct: 188 MQ-ASRRCC 195
>gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023906|gb|AAI35942.1| rab31 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 129/188 (68%), Gaps = 1/188 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVPSGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q +F KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDTFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDTR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-GMVLMDRPG 190
+VT ++A+ YA+ G +ETSAK A NV ++F I++R+P + P N S G + + R
Sbjct: 127 EVTMKDAREYAESIGAIVVETSAKNAINVEELFQGISRRIPPLDPHENGSNGAMKLGRQS 186
Query: 191 ERTASASC 198
++ + C
Sbjct: 187 FQSTTRCC 194
>gi|2500069|sp|Q13636.1|RAB31_HUMAN RecName: Full=Ras-related protein Rab-31; AltName: Full=Ras-related
protein Rab-22B
gi|10179679|gb|AAG13847.1|AF234995_1 small GTPase RAB22B [Homo sapiens]
gi|20379090|gb|AAM21105.1|AF498957_1 small GTP binding protein RAB31 [Homo sapiens]
gi|1388195|gb|AAB02832.1| low-Mr GTP-binding protein Rab31 [Homo sapiens]
gi|47115255|emb|CAG28587.1| RAB31 [Homo sapiens]
gi|54696916|gb|AAV38830.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|54696918|gb|AAV38831.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60818832|gb|AAX36478.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356180|gb|AAX41217.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356190|gb|AAX41218.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61363035|gb|AAX42323.1| RAB31 member RAS oncogene family [synthetic construct]
gi|189054712|dbj|BAG37334.1| unnamed protein product [Homo sapiens]
Length = 194
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P
Sbjct: 127 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPT 186
Query: 191 ERTASASCC 199
+ AS CC
Sbjct: 187 MQ-ASRRCC 194
>gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [synthetic construct]
gi|54696914|gb|AAV38829.1| RAB31, member RAS oncogene family [synthetic construct]
gi|60830380|gb|AAX36926.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366036|gb|AAX42804.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366043|gb|AAX42805.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P
Sbjct: 127 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPT 186
Query: 191 ERTASASCC 199
+ AS CC
Sbjct: 187 MQ-ASRRCC 194
>gi|83769133|dbj|BAE59270.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 227
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 142/209 (67%), Gaps = 21/209 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFV---------KGQFIEFQESTIGAAFFSQTLAVNDAT-VKF 61
KLVLLG+ GK SL L + + QF +++ESTIGAAF +QT++++++T VKF
Sbjct: 19 KLVLLGESAVGKVSLSLLVILTVADVFHYRDQFDDYRESTIGAAFLTQTISLDESTTVKF 78
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQERY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALA
Sbjct: 79 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALA 138
Query: 122 GNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
GNK DL+ D R + +A+AYA+E GL F ETSAKT++NV ++F IAK+LP Q
Sbjct: 139 GNKLDLVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLDQAG 198
Query: 178 P-----NPSGMVLM--DRPGERTASASCC 199
P NP V + + PG + A++ C
Sbjct: 199 PRNLRTNPRPGVDLRPEAPGTQGANSCQC 227
>gi|302654746|ref|XP_003019172.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
gi|291182879|gb|EFE38527.1| hypothetical protein TRV_06778 [Trichophyton verrucosum HKI 0517]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 138/199 (69%), Gaps = 16/199 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG KSSLVLRFVK QF +++ESTIGAAF +QT+++++ T VKFEIWDTAGQE
Sbjct: 18 KLVLLG-----KSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDTAGQE 72
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 73 RYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVNE 132
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P NP
Sbjct: 133 SPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRANPR 192
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP CS
Sbjct: 193 PGVDL-RPESANTQGGACS 210
>gi|50305705|ref|XP_452813.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641946|emb|CAH01664.1| KLLA0C13728p [Kluyveromyces lactis]
Length = 208
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 136/205 (66%), Gaps = 12/205 (5%)
Query: 6 NKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N N+ + KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + + D T+KFEIW
Sbjct: 2 NSNVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMADHTIKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + +V+AL GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKGIVIALVGNK 121
Query: 125 ADLLDA---RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP-RVQPAPNP 180
DLL++ RKV EEA+ +QE L F ETSAKT NVN++F I +++P + N
Sbjct: 122 MDLLESEEDRKVAKEEAEKLSQEENLLFFETSAKTGDNVNEVFLAIGEKIPLKKSDGSNT 181
Query: 181 SGM-------VLMDRPGERTASASC 198
G+ + +++P + + SC
Sbjct: 182 DGLRGTEDGRIDLNKPDDTSNPNSC 206
>gi|33589861|ref|NP_006859.2| ras-related protein Rab-31 [Homo sapiens]
gi|332849489|ref|XP_523865.3| PREDICTED: uncharacterized protein LOC468476 isoform 2 [Pan
troglodytes]
gi|426385456|ref|XP_004059230.1| PREDICTED: ras-related protein Rab-31 [Gorilla gorilla gorilla]
gi|9963781|gb|AAG09690.1|AF183421_1 small GTP-binding protein rab22b [Homo sapiens]
gi|12654623|gb|AAH01148.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60655513|gb|AAX32320.1| RAB31 member RAS oncogene family [synthetic construct]
gi|119622001|gb|EAX01596.1| RAB31, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984139|gb|ABM83504.1| RAB31, member RAS oncogene family [synthetic construct]
gi|123998237|gb|ABM86720.1| RAB31, member RAS oncogene family [synthetic construct]
gi|410217198|gb|JAA05818.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410266338|gb|JAA21135.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308006|gb|JAA32603.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308008|gb|JAA32604.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308010|gb|JAA32605.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352351|gb|JAA42779.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352353|gb|JAA42780.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352355|gb|JAA42781.1| RAB31, member RAS oncogene family [Pan troglodytes]
Length = 195
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPT 187
Query: 191 ERTASASCC 199
+ AS CC
Sbjct: 188 MQ-ASRRCC 195
>gi|417396875|gb|JAA45471.1| Putative gtpase [Desmodus rotundus]
Length = 195
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + +P
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGGIKLGKP- 186
Query: 191 ERTASASCC 199
AS CC
Sbjct: 187 TMPASRRCC 195
>gi|296413464|ref|XP_002836433.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630252|emb|CAZ80624.1| unnamed protein product [Tuber melanosporum]
Length = 218
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 130/174 (74%), Gaps = 7/174 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+A+++ T +KFEIWDTAGQE
Sbjct: 17 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDETTTIKFEIWDTAGQE 76
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL
Sbjct: 77 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIVIALAGNKLDLALP 136
Query: 129 ----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
R V EA+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P
Sbjct: 137 TGSPSKRAVETAEAEAYAREAGLLFFETSAKTAENVKELFTAIAKKLPLDQQGP 190
>gi|45184648|ref|NP_982366.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|44979994|gb|AAS50190.1| AAL176Cp [Ashbya gossypii ATCC 10895]
gi|374105564|gb|AEY94475.1| FAAL176Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 135/201 (67%), Gaps = 14/201 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV---NDATVKFEIWDTAG 68
KLVLLGD GKSS+V RFVK F EF+ESTIGAAF S+T+ + +DA +KFEIWDTAG
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSRTIKLADHDDAMIKFEIWDTAG 64
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADL 127
QERY SLAPMYYR A AA++VYD+T + S +A+ WV EL+++ G+ ++V+ L GNK DL
Sbjct: 65 QERYKSLAPMYYRNANAALVVYDVTQEDSLAKAQSWVNELKSKVGDEDLVIFLVGNKLDL 124
Query: 128 LDA----RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-----PRVQPAP 178
+D R + +EEAQAYA+ +GL F E SAKT T + D+F I +L + P
Sbjct: 125 VDEDCKPRVIDSEEAQAYAEAHGLMFHEVSAKTGTGILDVFQGIGGKLYEQRRESLAAQP 184
Query: 179 NPSGMVLMDRPGERTASASCC 199
S + + RP A+ SCC
Sbjct: 185 QHSSSIQLQRPTTNDAT-SCC 204
>gi|68479347|ref|XP_716205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68479514|ref|XP_716121.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483715|ref|XP_714216.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483800|ref|XP_714175.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435716|gb|EAK95092.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435764|gb|EAK95139.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437777|gb|EAK97117.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437866|gb|EAK97205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238880208|gb|EEQ43846.1| vacuolar protein sorting-associated protein 21 [Candida albicans
WO-1]
Length = 216
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 119/172 (69%), Gaps = 9/172 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWDTAGQER
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AAI+VYDIT ASF +A+ WV+EL Q N ++ +AL GNK DL++
Sbjct: 72 FASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVEDD 131
Query: 130 -------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
RKV+ EE Q+ A E GL F ETSAKT NVN++F I ++P V
Sbjct: 132 SAEDGETLRKVSVEEGQSLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSV 183
>gi|367007916|ref|XP_003688687.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
gi|357526997|emb|CCE66253.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
Length = 213
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 125/180 (69%), Gaps = 6/180 (3%)
Query: 6 NKNI-NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N N+ + KLVLLG+ GKSS+V+RFV F E +E TIGAAF +Q + ++D T+KFEIW
Sbjct: 2 NSNVASVKLVLLGEAAVGKSSIVVRFVSNDFSENKEPTIGAAFLTQRVNIDDHTIKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA+IVYD+T SF +A+ WV+EL Q + ++V+ALAGNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHWVKELHEQASGDIVIALAGNK 121
Query: 125 ADLLD-----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
DL++ RKV EE Q A E L F ETSAKT NVN+IF + ++P +P N
Sbjct: 122 VDLIEENGENERKVATEEGQKLADEENLLFFETSAKTGYNVNEIFLAVGDKIPLKRPNDN 181
>gi|392597256|gb|EIW86578.1| GTP-binding protein ypt5 [Coniophora puteana RWD-64-598 SS2]
Length = 259
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 129/204 (63%), Gaps = 37/204 (18%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
++++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++EIWD
Sbjct: 10 DRSVQVKLVLLGEAAVGKSSVVLRFVSNEFQPNKEPTIGAAFLTQKCRLEDRVLRYEIWD 69
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQER+HSLAPMYYR A AA++VYD+T +S E+AK WV+ELQ Q NPN+V+ALAGNK
Sbjct: 70 TAGQERFHSLAPMYYRNAQAAVVVYDVTKGSSLEKAKSWVKELQRQANPNIVIALAGNKV 129
Query: 126 DLL-------------------DA------------------RKVTAEEAQAYAQENGLF 148
DL+ DA R+V+ EEA AYA E GL
Sbjct: 130 DLVQSSSSSGNTSTSESEDEADDATATPGETPGSPNGEPESLRQVSREEAHAYATEAGLL 189
Query: 149 FMETSAKTATNVNDIFYEIAKRLP 172
F ETSAKT + +IF EIAK++P
Sbjct: 190 FFETSAKTGEGIVEIFTEIAKKIP 213
>gi|1457954|gb|AAC50773.1| Rab22b [Homo sapiens]
Length = 194
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P
Sbjct: 127 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPT 186
Query: 191 ERTASASCC 199
++ S CC
Sbjct: 187 MQS-SRRCC 194
>gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
gi|126093571|gb|ABN68260.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
Length = 215
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 132/210 (62%), Gaps = 15/210 (7%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
N + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWD
Sbjct: 5 NPATSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQER+ SLAPMYYR A AAI+VYDIT ASF +A+ WV+EL Q + ++ +AL GNK
Sbjct: 65 TAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKY 124
Query: 126 DLLD-------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP------ 172
DL++ RKV+ EE + A+E GL F ETSAKT+ NVND+F I ++P
Sbjct: 125 DLVEDDTEEESLRKVSVEEGKGLAEEEGLLFFETSAKTSYNVNDVFIGIGSKIPEAASAG 184
Query: 173 --RVQPAPNPSGMVLMDRPGERTASASCCS 200
++ N + L P R +A C+
Sbjct: 185 PNQIHQTNNDGRIDLTSDPNNRPRAAGDCA 214
>gi|388851463|emb|CCF54865.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Ustilago hordei]
Length = 270
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 126/198 (63%), Gaps = 32/198 (16%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K KLVLLG+ GKSS+VLRFV+ F E +E TIGAAF +Q + D +KFEIWDT
Sbjct: 23 KPFQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDRLIKFEIWDT 82
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A A+ ++YD+T +SFE+AK WV+ELQ Q NPN+V+AL GNK D
Sbjct: 83 AGQERFHSLAPMYYRNAQASAVIYDVTKASSFEKAKSWVKELQRQANPNIVIALVGNKID 142
Query: 127 LL----------------DARKVTA----------------EEAQAYAQENGLFFMETSA 154
LL D VTA +EA+AYA+E GL F ETSA
Sbjct: 143 LLSETSSSTSTAAEENDDDDETVTATGEAAASGESLRAVPKDEAEAYAKEAGLLFFETSA 202
Query: 155 KTATNVNDIFYEIAKRLP 172
KT V ++F EIAK++P
Sbjct: 203 KTGEGVVEVFTEIAKKIP 220
>gi|126302779|ref|XP_001368849.1| PREDICTED: ras-related protein Rab-22A-like [Monodelphis domestica]
gi|395506750|ref|XP_003757693.1| PREDICTED: ras-related protein Rab-22A [Sarcophilus harrisii]
Length = 194
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 124/188 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V +A+ YA F+ETSAK A N+N++F EI++R+P P+ SG R
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDTNPSSSGKGFKLRRQP 186
Query: 192 RTASASCC 199
SCC
Sbjct: 187 SEPKRSCC 194
>gi|427784137|gb|JAA57520.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 191
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
N K+ LLGD G GKSS++ RFV F ESTIGA+F + L ++D T KF IWD
Sbjct: 2 NTTTEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWD 61
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAPMYYRGA AA+IVYDIT+ SF + WV+ELQ G+PN+V+ +AGNK
Sbjct: 62 TAGQERYRALAPMYYRGAGAAVIVYDITSMESFNAVQSWVRELQLHGDPNIVLGIAGNKC 121
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
DL D R+V+ ++YA ++G F+ETSA ATN+ ++F IA ++P Q P
Sbjct: 122 DLEDHREVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKVPVAQGVRQPE---- 177
Query: 186 MDRPGERTASASCC 199
+ ++ A+ CC
Sbjct: 178 LKLNLKKNANKKCC 191
>gi|241959174|ref|XP_002422306.1| GTP-binding protein, putative; vacuolar protein sorting-associated
protein, putative; vacuolar protein-targeting protein,
putative [Candida dubliniensis CD36]
gi|223645651|emb|CAX40312.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 128/204 (62%), Gaps = 16/204 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWDTAGQER
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYDIT ASF +A+ WV+EL Q N ++ +AL GNK DL++
Sbjct: 72 FASLAPMYYRNAQAAVVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKLDLVEDD 131
Query: 130 -------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-------Q 175
RKV+ EE Q A E GL F ETSAKT NVN++F I ++P V Q
Sbjct: 132 SAEDGETLRKVSIEEGQTLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSVTVAGSEAQ 191
Query: 176 PAPNPSGMVLMDRPGERTASASCC 199
+ N + L + A+ S C
Sbjct: 192 ESSNGRRIDLTANTDDSNATRSTC 215
>gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P
Sbjct: 127 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPT 186
Query: 191 ERTASASCC 199
+ A+ CC
Sbjct: 187 MQ-ANRRCC 194
>gi|343426796|emb|CBQ70324.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Sporisorium reilianum SRZ2]
Length = 268
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 124/200 (62%), Gaps = 34/200 (17%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K KLVLLG+ GKSS+VLRFV+ F E +E TIGAAF +Q + D +KFEIWDT
Sbjct: 21 KPYQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDRLIKFEIWDT 80
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A A+ ++YD+T +SFE+AK WV+ELQ Q NPN+V+AL GNK D
Sbjct: 81 AGQERFHSLAPMYYRNAQASAVIYDVTKASSFEKAKSWVKELQRQANPNIVIALVGNKID 140
Query: 127 LLDA----------------------------------RKVTAEEAQAYAQENGLFFMET 152
LL R V +EA+AYA+E GL F ET
Sbjct: 141 LLKESSTSSAAADEAEEDGDDDDETATTTPEASAGDSLRAVPKDEAEAYAREAGLLFFET 200
Query: 153 SAKTATNVNDIFYEIAKRLP 172
SAKT V ++F EIAK++P
Sbjct: 201 SAKTGEGVVEVFTEIAKKIP 220
>gi|260797885|ref|XP_002593931.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
gi|229279163|gb|EEN49942.1| hypothetical protein BRAFLDRAFT_283834 [Branchiostoma floridae]
Length = 164
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 117/158 (74%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL LLGD G GKSSLV+RFV F ESTIGA+F S+TL VND + KF+IWDTAGQE+
Sbjct: 7 KLCLLGDSGVGKSSLVVRFVTDTFTANLESTIGASFMSKTLVVNDTSYKFQIWDTAGQEK 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y LAPMYYRGAAAAI+VYDIT + SF+ K W++EL+ G N+V+A+AGNK D+ D R
Sbjct: 67 YRGLAPMYYRGAAAAIVVYDITREGSFQTLKDWIRELKQYGADNIVLAIAGNKCDMEDLR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
+V+ A YA+EN F+ETSAKTA NV +F I++
Sbjct: 127 EVSTRMASDYAEENNAIFLETSAKTAHNVAQMFTLISE 164
>gi|365758386|gb|EHN00232.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 209
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 119/164 (72%), Gaps = 3/164 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + ++++AL GNK D+L
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDVLQDG 128
Query: 130 -ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV EE + A+E GL F ETSAKT NVN++F I +++P
Sbjct: 129 GERKVAKEEGEKLAEEKGLLFFETSAKTGENVNNVFLGIGEKIP 172
>gi|402221866|gb|EJU01934.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 260
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 131/219 (59%), Gaps = 47/219 (21%)
Query: 1 MATTGN----KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND 56
MA +G+ K + KLVLLG+ GKSS+V+RFV+ F E +E TIGAAF +Q + D
Sbjct: 1 MAESGDAPVDKPVQVKLVLLGEAAVGKSSVVMRFVQNDFSENKEPTIGAAFLTQKCRLED 60
Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNM 116
+++EIWDTAGQER+HSLAPMYYR A AA++VYDIT +S E+AK WV+ELQ Q NPN+
Sbjct: 61 RVLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDITKASSLEKAKSWVKELQRQANPNI 120
Query: 117 VMALAGNKADLLDA-------------------------------------------RKV 133
V+AL GNK DL+ + R+V
Sbjct: 121 VIALVGNKLDLVQSPAAAGAAPAGEEAEDEEADDATATPGEGGEQPLPEPEQEGESLRQV 180
Query: 134 TAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+EA AYAQE GL F ETSAKT V ++F EIAK++P
Sbjct: 181 PKDEAAAYAQEAGLLFAETSAKTGEGVVEVFTEIAKKIP 219
>gi|395511731|ref|XP_003760106.1| PREDICTED: ras-related protein Rab-31 [Sarcophilus harrisii]
Length = 195
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N + + + G+
Sbjct: 128 EVPMKDAKEYAESIGAVVVETSAKCAINIEELFQGISRQIPPLDPHENGNNGAI--KLGK 185
Query: 192 RTASAS--CC 199
+T AS CC
Sbjct: 186 QTPQASRRCC 195
>gi|384244624|gb|EIE18123.1| Rab5a Gtpase domain At 1.05 A resolution, partial [Coccomyxa
subellipsoidea C-169]
Length = 181
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLGD G GKS LVLR+V+GQF + T+GAAF S ++ + D T VKFEIWDTAGQE
Sbjct: 3 KLVLLGDSGVGKSCLVLRYVRGQFDANSKVTVGAAFMSHSVHLPDGTTVKFEIWDTAGQE 62
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAP+YYRGA+AA +VYDIT+ SF++AK WV ELQ + N+ + L GNK+DL +
Sbjct: 63 RYASLAPLYYRGASAAAVVYDITSGESFQKAKHWVSELQKNASGNIAIILVGNKSDLSEQ 122
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
R+VT E Q YA+ N + F+ETSAKTA NV IF +A +L
Sbjct: 123 REVTTETGQEYAERNSMLFIETSAKTAANVAAIFDTVAMKL 163
>gi|448535786|ref|XP_003871017.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis Co 90-125]
gi|380355373|emb|CCG24891.1| Vps21 late endosomal Rab small monomeric GTPase [Candida
orthopsilosis]
Length = 223
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 133/211 (63%), Gaps = 23/211 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D T+K+EIWDTAGQER
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA- 130
+ SLAPMYYR A AAI+VYDIT ASF +A+ WV+EL Q + ++ +AL GNK DL++
Sbjct: 73 FASLAPMYYRNAQAAIVVYDITKPASFVKARHWVKELHEQASKDITIALVGNKYDLVEDE 132
Query: 131 --------------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP---- 172
RKV+ EE QA A E GL F E SAKT+ NVN++F I +++P
Sbjct: 133 PEDGNTGEGDQELLRKVSKEEGQALADEEGLLFFEASAKTSYNVNEVFVGIGEKIPDNNK 192
Query: 173 RVQPAPNPSGMVLMDRPG----ERTASASCC 199
+ A +G V +R R +S+SCC
Sbjct: 193 QGGSAATNNGEVNENRIDLSVENRKSSSSCC 223
>gi|338728025|ref|XP_001489577.2| PREDICTED: ras-related protein Rab-31-like [Equus caballus]
Length = 195
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + +P
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGGIKLMKPS 187
Query: 191 ERTASASCC 199
+ A CC
Sbjct: 188 TQ-AGPRCC 195
>gi|440901603|gb|ELR52512.1| Ras-related protein Rab-31, partial [Bos grunniens mutus]
Length = 197
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 127/188 (67%), Gaps = 2/188 (1%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
LVL D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 11 LVLFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 70
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+
Sbjct: 71 HSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 130
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGE 191
V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N SG + + +P
Sbjct: 131 VPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGSIKLGKPTS 190
Query: 192 RTASASCC 199
+ S CC
Sbjct: 191 QV-SRRCC 197
>gi|213403714|ref|XP_002172629.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
gi|212000676|gb|EEB06336.1| GTP-binding protein ypt5 [Schizosaccharomyces japonicus yFS275]
Length = 217
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 129/189 (68%), Gaps = 8/189 (4%)
Query: 19 VGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWDTAGQERYHSLAP 77
GA SSLVLRFVK QF +F+ESTIGAAF +QTL +ND VK+EIWDTAGQERY SLAP
Sbjct: 29 TGAVDSSLVLRFVKDQFDDFRESTIGAAFLTQTLPINDELAVKYEIWDTAGQERYKSLAP 88
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK-VTAE 136
MYYR A AI+VYDIT AS E+AK W++ELQ Q +V+ALAGNK DL R+ V
Sbjct: 89 MYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKS 148
Query: 137 EAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP---RVQPAPN--PSGMVLMD-RPG 190
+A++YA E GL F ETSAKTA NV ++F IA +LP ++ A N P G+ L R
Sbjct: 149 DAESYANEMGLLFFETSAKTAENVTELFTAIANKLPLQEQLTQAKNASPRGVNLSQARNA 208
Query: 191 ERTASASCC 199
+T A C
Sbjct: 209 TQTNGACAC 217
>gi|178056610|ref|NP_001116646.1| ras-related protein Rab-22A [Sus scrofa]
gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family [Sus scrofa]
Length = 194
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 128/191 (67%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P +P PS G L +
Sbjct: 127 EVLERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDASP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PKRSCC 194
>gi|171686920|ref|XP_001908401.1| hypothetical protein [Podospora anserina S mat+]
gi|170943421|emb|CAP69074.1| unnamed protein product [Podospora anserina S mat+]
Length = 231
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 118/178 (66%), Gaps = 17/178 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNDS 133
Query: 129 --------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
DARKVT EEA++YA+E GL F ETSAKT NV ++F IA +P
Sbjct: 134 AGGDGEGAGVGDGEDARKVTTEEAKSYAEEEGLLFFETSAKTGYNVTEVFTAIANAIP 191
>gi|440470816|gb|ELQ39867.1| mitochondrion protein [Magnaporthe oryzae Y34]
gi|440482453|gb|ELQ62942.1| mitochondrion protein [Magnaporthe oryzae P131]
Length = 932
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 126/184 (68%), Gaps = 20/184 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GK QF ++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 21 KLVLLGESAVGKD---------QFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 71
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 72 RYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVTE 131
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
D R V EA+AYA+E GL F ETSAKTA NV D+F IAK+LP Q P +
Sbjct: 132 QPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKLPLDQAGPRHA----- 186
Query: 187 DRPG 190
RPG
Sbjct: 187 -RPG 189
>gi|71657908|ref|XP_817462.1| small Rab GTP binding protein [Trypanosoma cruzi strain CL Brener]
gi|70882655|gb|EAN95611.1| small Rab GTP binding protein, putative [Trypanosoma cruzi]
Length = 200
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 129/190 (67%), Gaps = 3/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD G GKSSLV R K ++ E Q ST+GA+FF + V+D V F+IWDTAGQER
Sbjct: 12 KVVLLGDSGVGKSSLVQRLAKDEWNENQNSTVGASFFRYSCPVDDTAVNFDIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLA MYYRGAAAA++VY++ +FERAK WV+EL A +P ++ L GNK+DL + R
Sbjct: 72 YKSLASMYYRGAAAALVVYELPLYETFERAKYWVRELAAN-SPETIITLVGNKSDLANRR 130
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL--PRVQPAPNPSGMVLMDRP 189
V+AEEA AYA+E L F+E SAK + V DIF +IA+RL Q G++ +P
Sbjct: 131 NVSAEEATAYAKELDLMFIEASAKDGSRVRDIFEKIARRLVAANSQNTVRDGGVIGARQP 190
Query: 190 GERTASASCC 199
G++T CC
Sbjct: 191 GKKTRQLGCC 200
>gi|224078511|ref|XP_002199135.1| PREDICTED: ras-related protein Rab-22A [Taeniopygia guttata]
Length = 194
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 123/188 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA F+ETSAK A N+N++F EI++R+P P SG R
Sbjct: 127 EVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDTNPASSGKGFKLRRQP 186
Query: 192 RTASASCC 199
SCC
Sbjct: 187 SVTKRSCC 194
>gi|426241217|ref|XP_004014488.1| PREDICTED: ras-related protein Rab-22A [Ovis aries]
gi|296481198|tpg|DAA23313.1| TPA: RAS-related protein RAB-22A [Bos taurus]
Length = 194
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 128/191 (67%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P +P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAVFVETSAKNAININELFIEISRRIPSTDASP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PKRSCC 194
>gi|71894915|ref|NP_001026038.1| ras-related protein Rab-22A [Gallus gallus]
gi|53130292|emb|CAG31475.1| hypothetical protein RCJMB04_6n2 [Gallus gallus]
Length = 194
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 123/188 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA F+ETSAK A N+N++F EI++R+P P SG R
Sbjct: 127 EVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDTNPPSSGKGFKLRRQP 186
Query: 192 RTASASCC 199
SCC
Sbjct: 187 SVTKRSCC 194
>gi|449274250|gb|EMC83533.1| Ras-related protein Rab-22A [Columba livia]
Length = 194
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 123/188 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA F+ETSAK A N+N++F EI++R+P P SG R
Sbjct: 127 EVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSSGKGFKLRRQP 186
Query: 192 RTASASCC 199
SCC
Sbjct: 187 SVTKRSCC 194
>gi|417396853|gb|JAA45460.1| Putative gtpase [Desmodus rotundus]
Length = 194
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 123/188 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V +A+ YA F+ETSAK A N+N++F EI++R+P +P G R
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDSSPPCGGKGFKLRRQP 186
Query: 192 RTASASCC 199
SCC
Sbjct: 187 SEPKRSCC 194
>gi|327278061|ref|XP_003223781.1| PREDICTED: ras-related protein Rab-22A-like [Anolis carolinensis]
Length = 194
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 123/188 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA F+ETSAK A N+N++F EI++R+P P SG R
Sbjct: 127 EVMEKDAKDYADSIHAVFVETSAKNAININELFIEISRRIPSTDTNPPSSGKGFKLRRQP 186
Query: 192 RTASASCC 199
SCC
Sbjct: 187 SVTKRSCC 194
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
Length = 207
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 133/204 (65%), Gaps = 16/204 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND----ATVKFEIWDTA 67
KLVLLGD GKSS+V RFVK F + +ESTIGAAF SQT+ +ND VKFEIWDTA
Sbjct: 5 KLVLLGDSSVGKSSIVNRFVKDSFEDLRESTIGAAFLSQTIKLNDNGKEVIVKFEIWDTA 64
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKAD 126
GQERY SLAPMYYR A AA++VYDIT S +AK WV+EL+ + G+ N+V+ L GNK D
Sbjct: 65 GQERYKSLAPMYYRNANAALVVYDITELDSLNKAKTWVEELKNKVGDDNIVIYLVGNKLD 124
Query: 127 LLD----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA----- 177
+ + R V+ E A+ YA+E GL F+ETSAKT N+ + F EI ++L ++
Sbjct: 125 VCEKDSSKRLVSLEGAKEYAKEQGLLFIETSAKTGANIKETFQEIGEKLYDIKKTEVNTD 184
Query: 178 -PNPSGMVLMDRPGERTASASCCS 200
+G + + +P + SCCS
Sbjct: 185 LDGNTGEIEISKPS-TNDTTSCCS 207
>gi|410977346|ref|XP_003995067.1| PREDICTED: ras-related protein Rab-31 [Felis catus]
Length = 217
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 128/188 (68%), Gaps = 2/188 (1%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
L+L D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 31 LILFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 90
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+
Sbjct: 91 HSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 150
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGE 191
V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + +P
Sbjct: 151 VPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKPAT 210
Query: 192 RTASASCC 199
+ AS CC
Sbjct: 211 Q-ASRRCC 217
>gi|56118785|ref|NP_991282.2| ras-related protein Rab-22A [Danio rerio]
gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio]
gi|182889502|gb|AAI65262.1| Rab22a protein [Danio rerio]
Length = 196
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DL DAR
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GMVLMDRP 189
+V+ ++A+ YA F+ETSAK A N+N++F +I++R+P + + G L +P
Sbjct: 127 EVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERIPVLDAEGGSAVKGFKLRRQP 186
Query: 190 GERTASASCC 199
T +CC
Sbjct: 187 SVSTRERTCC 196
>gi|397525605|ref|XP_003832751.1| PREDICTED: ras-related protein Rab-22A-like [Pan paniscus]
Length = 219
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 32 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 91
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 92 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 151
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 152 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQ 210
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 211 PSE--PKRSCC 219
>gi|344296537|ref|XP_003419963.1| PREDICTED: ras-related protein Rab-22A-like [Loxodonta africana]
Length = 194
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPDIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ--PAPNPSGMVLMDRP 189
+V +A+ YA F+ETSAK A N+N++F EI++R+P P G L +P
Sbjct: 127 EVMERDAKDYADSIHAVFVETSAKNAININELFIEISRRIPSTDANPPSGSKGFKLRRQP 186
Query: 190 GERTASASCC 199
E A SCC
Sbjct: 187 SE--AKRSCC 194
>gi|346473575|gb|AEO36632.1| hypothetical protein [Amblyomma maculatum]
Length = 194
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 126/197 (63%), Gaps = 4/197 (2%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T N K+ LLGD G GKSS++ RFV F ESTIGA+F + L ++D T KF
Sbjct: 2 STMNTTTEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFN 61
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY +LAPMYYRGAAAA+IVYDIT+ SF + WV+ELQ G N+ + +AG
Sbjct: 62 IWDTAGQERYRALAPMYYRGAAAAVIVYDITSMDSFNAVQSWVRELQLHGEQNIALGIAG 121
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
NK DL D R+V+ ++YA ++G F+ETSA ATN+ ++F IA ++P Q P
Sbjct: 122 NKCDLEDHREVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKVPVAQGIRQPE- 180
Query: 183 MVLMDRPGERTASASCC 199
+ ++ +S CC
Sbjct: 181 ---LKLSLKKNSSKKCC 194
>gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio]
Length = 196
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DL DAR
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GMVLMDRP 189
+V+ ++A+ YA F+ETSAK A N+N++F +I++R+P + + G L +P
Sbjct: 127 EVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERIPVLDAEGGSAVKGFKLRRQP 186
Query: 190 GERTASASCC 199
T +CC
Sbjct: 187 SVSTRERTCC 196
>gi|62900806|sp|Q6GQP4.2|RAB31_RAT RecName: Full=Ras-related protein Rab-31; AltName: Full=GTP-binding
protein Rab0
Length = 194
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N
Sbjct: 127 EVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHEN 174
>gi|195652409|gb|ACG45672.1| ras-related protein RHN1 [Zea mays]
gi|414869109|tpg|DAA47666.1| TPA: ras protein RHN1 isoform 1 [Zea mays]
gi|414869110|tpg|DAA47667.1| TPA: ras protein RHN1 isoform 2 [Zea mays]
Length = 125
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 108/125 (86%), Gaps = 2/125 (1%)
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGN N ++ALAGNKADLLD R+V+A+E
Sbjct: 1 MYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIVALAGNKADLLDTRQVSADE 60
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS-GMVLMDRPGER-TAS 195
A+AYAQENGLFFMETSAKTATNVND+FYEIAK+L + Q NP GMVL RP ER +S
Sbjct: 61 AKAYAQENGLFFMETSAKTATNVNDVFYEIAKKLLQGQQVQNPQGGMVLNQRPPERMVSS 120
Query: 196 ASCCS 200
+SCC+
Sbjct: 121 SSCCA 125
>gi|77404176|ref|NP_659562.2| ras-related protein Rab-31 [Rattus norvegicus]
gi|49119014|gb|AAH72698.1| RAB31, member RAS oncogene family [Rattus norvegicus]
Length = 195
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N
Sbjct: 128 EVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHEN 175
>gi|302563975|ref|NP_001180746.1| ras-related protein Rab-22A [Macaca mulatta]
gi|297707438|ref|XP_002830512.1| PREDICTED: ras-related protein Rab-22A [Pongo abelii]
gi|397469142|ref|XP_003806222.1| PREDICTED: ras-related protein Rab-22A [Pan paniscus]
gi|402882151|ref|XP_003904614.1| PREDICTED: ras-related protein Rab-22A [Papio anubis]
gi|426392268|ref|XP_004062478.1| PREDICTED: ras-related protein Rab-22A [Gorilla gorilla gorilla]
gi|380788255|gb|AFE66003.1| ras-related protein Rab-22A [Macaca mulatta]
gi|383420237|gb|AFH33332.1| ras-related protein Rab-22A [Macaca mulatta]
gi|410220672|gb|JAA07555.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410260092|gb|JAA18012.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410298900|gb|JAA28050.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410335379|gb|JAA36636.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 194
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PKRSCC 194
>gi|225579124|ref|NP_598446.2| ras-related protein Rab-31 [Mus musculus]
gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculus]
gi|74186712|dbj|BAE34811.1| unnamed protein product [Mus musculus]
gi|112293003|dbj|BAF02879.1| Rab22B [Mus musculus]
Length = 195
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--NPSGMVLMDRP 189
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N G+ L ++
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKLGNQ- 186
Query: 190 GERTASASCC 199
AS CC
Sbjct: 187 -SLQASRRCC 195
>gi|403161720|ref|XP_003322028.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171898|gb|EFP77609.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 285
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 128/217 (58%), Gaps = 47/217 (21%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
+T K + KLVLLG+ GKSS+VLRFV+ F E +E TIGAAF +Q + D +KFE
Sbjct: 16 STDGKPVQVKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDKIIKFE 75
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQER+HSLAPMYYR A AAI+ YDIT +S ++AK WV+ELQ QG+ N+V+AL G
Sbjct: 76 IWDTAGQERFHSLAPMYYRNAQAAIVAYDITKSSSLDKAKSWVKELQRQGHANIVIALIG 135
Query: 123 NKADLLDA-----------------------------------------------RKVTA 135
NK DL+ + R+VT
Sbjct: 136 NKLDLVQSDADQSASNGSSSSNADDEPDDATATPDNATSLPDSTAANPNLSSSSKRQVTK 195
Query: 136 EEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
EEA+AYAQEN L F ETSAKT + ++F +IA ++P
Sbjct: 196 EEAEAYAQENNLLFFETSAKTGEGIVEVFTQIAGKIP 232
>gi|62901101|sp|Q921E2.1|RAB31_MOUSE RecName: Full=Ras-related protein Rab-31
gi|15341792|gb|AAH13063.1| RAB31, member RAS oncogene family [Mus musculus]
Length = 194
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--NPSGMVLMDRP 189
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N G+ L ++
Sbjct: 127 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKLGNQ- 185
Query: 190 GERTASASCC 199
AS CC
Sbjct: 186 -SLQASRRCC 194
>gi|441639329|ref|XP_003277577.2| PREDICTED: ras-related protein Rab-22A [Nomascus leucogenys]
Length = 250
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 6/190 (3%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
L LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 64 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 123
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
+LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+
Sbjct: 124 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 183
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRP 189
V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +P
Sbjct: 184 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQP 242
Query: 190 GERTASASCC 199
E SCC
Sbjct: 243 SE--PKRSCC 250
>gi|348552524|ref|XP_003462077.1| PREDICTED: ras-related protein Rab-22A-like [Cavia porcellus]
Length = 194
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 122/188 (64%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V +A+ YA F+ETSAK A N+N++F EI++R+P P G R
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPPSGGKGFKLRRPP 186
Query: 192 RTASASCC 199
SCC
Sbjct: 187 SEPKRSCC 194
>gi|190345894|gb|EDK37861.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 122/180 (67%), Gaps = 10/180 (5%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 68
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ SLAPMYYR A AA++VYDIT ASF +A+ WV+EL Q + ++ +AL GNK DL++
Sbjct: 69 ERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKHDLVE 128
Query: 130 ---------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
RKV+ EE Q A E GL F ETSAKTA NVN++F I ++P P+ P
Sbjct: 129 DDNDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPEA-PSSKP 187
>gi|340516399|gb|EGR46648.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 229
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 121/188 (64%), Gaps = 16/188 (8%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+K
Sbjct: 1 MAEAPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQER+ SLAPMYYR A AA++VYDIT S +A+ WV ELQ Q +P +V+AL
Sbjct: 61 FEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLVKARHWVAELQRQASPGIVIAL 120
Query: 121 AGNKADLL----------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
GNK DL DARKV+ EEAQ+YA+E L F ETSAKT NV ++F
Sbjct: 121 VGNKLDLAGESQGASEEAEGEDGGDARKVSTEEAQSYAEEESLLFFETSAKTGHNVTEVF 180
Query: 165 YEIAKRLP 172
IA +P
Sbjct: 181 TAIANAIP 188
>gi|50978970|ref|NP_001003208.1| ras-related protein Rab-22A [Canis lupus familiaris]
gi|3256092|emb|CAA80473.1| Rab22a protein [Canis lupus familiaris]
Length = 194
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADANP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PQRSCC 194
>gi|426254027|ref|XP_004020688.1| PREDICTED: ras-related protein Rab-31 [Ovis aries]
Length = 252
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 127/188 (67%), Gaps = 2/188 (1%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
LVL D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 66 LVLFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 125
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+
Sbjct: 126 HSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 185
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGE 191
V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N SG + + +P
Sbjct: 186 VPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGSIKLVKPTS 245
Query: 192 RTASASCC 199
+ A CC
Sbjct: 246 Q-AGRRCC 252
>gi|406604009|emb|CCH44471.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 208
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 122/172 (70%), Gaps = 5/172 (2%)
Query: 6 NKNIN-AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
NK I KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D T+KFEIW
Sbjct: 3 NKQITPVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCIIGDKTIKFEIW 62
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA++VYDIT ASF +A+ W++EL Q + ++++AL GNK
Sbjct: 63 DTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHWIKELHEQASKDIIIALVGNK 122
Query: 125 ADLLDA----RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
D+++ RKV EE + A E GL F+ETSAKT+ NV ++F I +++P
Sbjct: 123 LDVVEEDESNRKVAYEEGETLANEEGLIFLETSAKTSFNVKEVFMNIGQKIP 174
>gi|390462760|ref|XP_003732900.1| PREDICTED: ras-related protein Rab-22A-like [Callithrix jacchus]
Length = 228
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 6/190 (3%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
L LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 42 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 101
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
+LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+
Sbjct: 102 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 161
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRP 189
V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +P
Sbjct: 162 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQP 220
Query: 190 GERTASASCC 199
E SCC
Sbjct: 221 SE--PKRSCC 228
>gi|213514424|ref|NP_001134194.1| Ras-related protein Rab-22A [Salmo salar]
gi|209731382|gb|ACI66560.1| Ras-related protein Rab-22A [Salmo salar]
Length = 195
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 3/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDNFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DL DAR
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV--LMDRP 189
+V+ ++A+ YA F+ETSAK A N+N++F EI++R+P + +G L RP
Sbjct: 127 EVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISQRIPVLDAGGGAAGNGFKLRRRP 186
Query: 190 GERTASASCC 199
E T + +CC
Sbjct: 187 SE-TRTRTCC 195
>gi|7767071|pdb|1EK0|A Chain A, Gppnhp-Bound Ypt51 At 1.48 A Resolution
Length = 170
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 117/164 (71%), Gaps = 3/164 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQER
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAP YYR A AA++VYD+T SF +A+ WV+EL Q + ++++AL GNK D L
Sbjct: 65 FASLAPXYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDXLQEG 124
Query: 130 -ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV EE + A+E GL F ETSAKT NVND+F I +++P
Sbjct: 125 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168
>gi|336374082|gb|EGO02419.1| hypothetical protein SERLA73DRAFT_175933 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387008|gb|EGO28153.1| hypothetical protein SERLADRAFT_458592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 259
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 135/228 (59%), Gaps = 38/228 (16%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
+K++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++EIWD
Sbjct: 12 SKSVQVKLVLLGEAAVGKSSVVLRFVTNEFQSNKEPTIGAAFLTQKCRLEDRVLRYEIWD 71
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQER+HSLAPMYYR A AA+++YD+T +S ++AK WV+ELQ Q +PN+V+AL GNK
Sbjct: 72 TAGQERFHSLAPMYYRNAQAAVVIYDVTKASSLDKAKSWVKELQRQAHPNIVIALVGNKI 131
Query: 126 DLL--------------------DA-----------------RKVTAEEAQAYAQENGLF 148
DL+ DA R+V EEAQAYA E GL
Sbjct: 132 DLVRPLSLSLGFTPHPDSEEEADDATATPDGTTSGDAGPVCLRQVPREEAQAYAAETGLL 191
Query: 149 FMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV-LMDRPGERTAS 195
F ETSAKT + ++F IAK++P + G V D G RT S
Sbjct: 192 FSETSAKTGEGIVEVFTAIAKKIPIEHIIASSRGSVGRFDVAGSRTVS 239
>gi|402470455|gb|EJW04677.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 194
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
M T + N KLV+LG GKSSLV+++VK +F +ESTIGAAF ++T+ + D VK
Sbjct: 1 MNITSDMVYNYKLVVLGYYSVGKSSLVMKYVKREFNPNEESTIGAAFCAKTVQLKDCNVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
+EIWDTAGQERY+SL PMYYRGA A+IVYDITN SF AKKWV EL+ + + + L
Sbjct: 61 YEIWDTAGQERYNSLIPMYYRGAQVALIVYDITNPQSFTCAKKWVDELKEEKPKDFLKVL 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPN 179
GNK+DL +RK+ E+ YA++NGL F ETSAKT NV+ IF ++A LPR ++ +
Sbjct: 121 VGNKSDLDASRKIHFEDGLNYAEQNGLLFYETSAKTGYNVDKIFEDVASILPRTIRKSAV 180
Query: 180 PS 181
PS
Sbjct: 181 PS 182
>gi|358398111|gb|EHK47469.1| hypothetical protein TRIATDRAFT_298602 [Trichoderma atroviride IMI
206040]
Length = 229
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 121/188 (64%), Gaps = 16/188 (8%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+K
Sbjct: 1 MAEAPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQER+ SLAPMYYR A AA++VYDIT S +A+ WV ELQ Q +P +V+AL
Sbjct: 61 FEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLVKARHWVAELQRQASPGIVIAL 120
Query: 121 AGNKADL----------------LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
GNK DL DARKV EEAQ+YA+E GL F ETSAKT NV ++F
Sbjct: 121 VGNKLDLAGESQSTSEEGDGEDGGDARKVPTEEAQSYAEEEGLLFFETSAKTGHNVTEVF 180
Query: 165 YEIAKRLP 172
IA +P
Sbjct: 181 TAIANAIP 188
>gi|355714893|gb|AES05152.1| RAB31, member RAS oncoprotein family [Mustela putorius furo]
Length = 194
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N
Sbjct: 128 EVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHEN 175
>gi|317418736|emb|CBN80774.1| Ras-related protein Rab-22A [Dicentrarchus labrax]
Length = 194
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 122/171 (71%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DL DAR
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
+V ++A+ YA F+ETSAK A N+N++F EI+KR+P V A SG
Sbjct: 127 EVPEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRIPIVDAAGATSG 177
>gi|255718227|ref|XP_002555394.1| KLTH0G08206p [Lachancea thermotolerans]
gi|238936778|emb|CAR24957.1| KLTH0G08206p [Lachancea thermotolerans CBS 6340]
Length = 212
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 121/164 (73%), Gaps = 3/164 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + + D T+KFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMGDHTIKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA- 130
+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL+ Q + ++++AL GNK D+++
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELREQASKDIIIALVGNKLDMVETG 128
Query: 131 --RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV EEA+ A + GL F ETSAKT +NVN++F I +++P
Sbjct: 129 AERKVALEEAENLASQEGLLFFETSAKTGSNVNEVFLAIGQKIP 172
>gi|403282653|ref|XP_003932756.1| PREDICTED: ras-related protein Rab-22A [Saimiri boliviensis
boliviensis]
Length = 248
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 6/190 (3%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
L LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 62 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 121
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
+LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+
Sbjct: 122 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 181
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRP 189
V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +P
Sbjct: 182 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQP 240
Query: 190 GERTASASCC 199
E SCC
Sbjct: 241 SE--PKRSCC 248
>gi|296473718|tpg|DAA15833.1| TPA: RAB31, member RAS oncogene family [Bos taurus]
Length = 182
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N
Sbjct: 128 EVPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHEN 175
>gi|367050914|ref|XP_003655836.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL 8126]
gi|347003100|gb|AEO69500.1| hypothetical protein THITE_2171042 [Thielavia terrestris NRRL 8126]
Length = 233
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 117/180 (65%), Gaps = 19/180 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNTG 133
Query: 129 ----------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
DARKVT EEA+ YA+E GL F ETSAKT NV ++F IA +P
Sbjct: 134 PGGGGDADGAGAEDSGDARKVTTEEAKTYAEEEGLLFYETSAKTGYNVTEVFTAIANAIP 193
>gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|165971249|gb|AAI58651.1| Rab22a protein [Rattus norvegicus]
Length = 194
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ--PAPNPSGMVLMDRP 189
+V +A+ YA F+ETSAK A N+N++F EI++RLP PA G L +P
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRLPSTDASPASGGKGFKLRRQP 186
Query: 190 GERTASASCC 199
E SCC
Sbjct: 187 SE--PKRSCC 194
>gi|432858229|ref|XP_004068856.1| PREDICTED: ras-related protein Rab-22A-like [Oryzias latipes]
Length = 194
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 128/188 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GK+S+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKTSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAA+IVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DL DAR
Sbjct: 67 FRALAPMYYRGSAAAVIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V+ ++A+ YA+ F+ETSAK A N+N++F EI+KR+P V A S +
Sbjct: 127 EVSEKDAKDYAESIHAIFVETSAKNAININEVFTEISKRIPVVDAAGGSSAKSIKLGRQV 186
Query: 192 RTASASCC 199
+ +CC
Sbjct: 187 SESRKTCC 194
>gi|410055384|ref|XP_001135766.3| PREDICTED: ras-related protein Rab-22A [Pan troglodytes]
Length = 230
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 6/190 (3%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
L LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 44 LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERF 103
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
+LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+
Sbjct: 104 RALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRE 163
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRP 189
V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +P
Sbjct: 164 VMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQP 222
Query: 190 GERTASASCC 199
E SCC
Sbjct: 223 SE--PKRSCC 230
>gi|149642869|ref|NP_001092635.1| ras-related protein Rab-22A [Bos taurus]
gi|148744911|gb|AAI42191.1| RAB22A protein [Bos taurus]
Length = 194
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++ EI++R+P +P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAVFVETSAKNAININELLIEISRRIPSTDASP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PKRSCC 194
>gi|146420668|ref|XP_001486288.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 119/173 (68%), Gaps = 9/173 (5%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWDTAGQ
Sbjct: 9 SVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQ 68
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ SLAPMYYR A AA++VYDIT ASF +A+ WV+EL Q + ++ +AL GNK DL++
Sbjct: 69 ERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKHDLVE 128
Query: 130 ---------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
RKV+ EE Q A E GL F ETSAKTA NVN++F I ++P
Sbjct: 129 DDNDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPE 181
>gi|71004772|ref|XP_757052.1| hypothetical protein UM00905.1 [Ustilago maydis 521]
gi|46096856|gb|EAK82089.1| hypothetical protein UM00905.1 [Ustilago maydis 521]
Length = 280
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 128/207 (61%), Gaps = 41/207 (19%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN--------DAT 58
K KLVLLG+ GKSS+VLRFV+ F E +E TIGAAF + +++V+ D
Sbjct: 28 KPFQTKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTVSMSVSSIQKCRLEDRL 87
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
+KFEIWDTAGQER+HSLAPMYYR A A+ ++YD+T +SFE+AK WV+ELQ Q NPN+V+
Sbjct: 88 IKFEIWDTAGQERFHSLAPMYYRNAQASAVIYDVTKASSFEKAKSWVKELQRQANPNIVI 147
Query: 119 ALAGNKADLLDA---------------------------------RKVTAEEAQAYAQEN 145
AL GNK DLL+ R V +EA+AYA+E
Sbjct: 148 ALVGNKIDLLNETSSSSSANAETEDDDDDDTATTTPEATAAAESLRAVPKDEAEAYAKEA 207
Query: 146 GLFFMETSAKTATNVNDIFYEIAKRLP 172
GL F ETSAKT V ++F EIAK++P
Sbjct: 208 GLLFFETSAKTGEGVIEVFTEIAKKIP 234
>gi|294654743|ref|XP_456809.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
gi|199429115|emb|CAG84784.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
Length = 221
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 118/169 (69%), Gaps = 8/169 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D T+K+EIWDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQER 70
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYDIT ASF +A+ WV+EL Q + ++ +AL GNK DL +
Sbjct: 71 FQSLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKYDLAEND 130
Query: 130 ------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV+ EE + A+E GL F ETSAK++ NVND+F I ++P
Sbjct: 131 NENEESLRKVSIEEGKNLAEEEGLLFFETSAKSSYNVNDVFVGIGSKIP 179
>gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Rattus norvegicus]
Length = 194
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEYGPENIVMAIAGNKCDLSDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N
Sbjct: 127 EVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHEN 174
>gi|426201327|gb|EKV51250.1| GTP-binding protein RAB5 [Agaricus bisporus var. bisporus H97]
Length = 207
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 132/188 (70%), Gaps = 3/188 (1%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIW 64
+K KLVLLG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 2 SKQFQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQTTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERY APMYYR A A++VYDIT +S E+A+ W++ELQ Q +PN+V+ L GNK
Sbjct: 62 DTAGQERYK--APMYYRNANCAVVVYDITQSSSLEKARTWIRELQRQADPNIVITLCGNK 119
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
+DL R+VT EEA+ YA+E GL + ETSAK+ V ++F IAK+LP SG
Sbjct: 120 SDLDARRQVTQEEAKKYAEEEGLMWAETSAKSGEGVTEVFTAIAKKLPLTASPSARSGAG 179
Query: 185 LMDRPGER 192
PG R
Sbjct: 180 SRTGPGAR 187
>gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus]
Length = 195
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPWGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--NPSGMVLMDRP 189
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N G+ L ++
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKLGNQ- 186
Query: 190 GERTASASCC 199
AS CC
Sbjct: 187 -SLQASRRCC 195
>gi|354548461|emb|CCE45197.1| hypothetical protein CPAR2_702090 [Candida parapsilosis]
Length = 228
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 129/216 (59%), Gaps = 28/216 (12%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D T+K+EIWDTAGQER
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AAI+VYDIT ASF +A+ WV+EL Q + ++ +AL GNK DL++
Sbjct: 73 FASLAPMYYRNAQAAIVVYDITKPASFVKARHWVKELHEQASKDITIALVGNKYDLVEDE 132
Query: 130 -----------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV+ EE QA A E GL F E SAKT+ NVN++F I +++P
Sbjct: 133 PEDGGNVGEGEGGTSESLRKVSKEEGQALADEEGLLFFEASAKTSYNVNEVFVGIGEKIP 192
Query: 173 RVQPAPNPSGMVLMDRPGE---------RTASASCC 199
+ GE R +S++CC
Sbjct: 193 DSNKQSGGNTATNNGEVGENRIDLSVENRKSSSTCC 228
>gi|269866354|ref|XP_002652244.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
gi|220062888|gb|EED41812.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
Length = 196
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 127/188 (67%), Gaps = 4/188 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV+LG GKSS+VL F+K +F +ESTIGAAF ++T+ ++ VKFEIWDTAGQER
Sbjct: 13 KLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAAFLTKTVFIDGTAVKFEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y+SL PMYYRGA AA++VYDIT+ SFERAK+W+++L+ + N + L GNK DL +A
Sbjct: 73 YYSLIPMYYRGANAALVVYDITSAESFERAKRWIEDLKTEKPDNFMKVLIGNKVDLSEAA 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+T E + YA++ GL F +TSAKT + D+F E+A LP+ Q N + D +
Sbjct: 133 VITEEMGKQYAEQEGLLFYQTSAKTGEGIKDLFLELATILPKDQAKSNQ----MNDLLKK 188
Query: 192 RTASASCC 199
+ + CC
Sbjct: 189 KQTNFFCC 196
>gi|348537324|ref|XP_003456145.1| PREDICTED: ras-related protein Rab-22A-like [Oreochromis niloticus]
Length = 194
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 129/190 (67%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DL DAR
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GMVLMDRP 189
+V ++A+ YA F+ETSAK A N+N++F EI+KR+P V A S G L +
Sbjct: 127 EVPEKDAKDYADSIHAIFVETSAKNAININEVFVEISKRIPVVDEAGGSSARGFKLGRQA 186
Query: 190 GERTASASCC 199
E + +CC
Sbjct: 187 SE--SRRTCC 194
>gi|239611052|gb|EEQ88039.1| ypt5 protein [Ajellomyces dermatitidis ER-3]
Length = 208
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 134/199 (67%), Gaps = 20/199 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GK QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQE
Sbjct: 19 KLVLLGESAVGKD---------QFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQE 69
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL-- 128
RY SLAPMYYR A A++VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+
Sbjct: 70 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTD 129
Query: 129 --DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPS 181
D R + +A+AYA+E GL F ETSAK++TNV ++F IAK+LP Q P NP
Sbjct: 130 SPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKLPLDQAGPRNLRSNPR 189
Query: 182 GMVLMDRPGERTASASCCS 200
V + RP A+ CS
Sbjct: 190 PGVDL-RPEAAGPQANGCS 207
>gi|378728260|gb|EHY54719.1| rab family, other [Exophiala dermatitidis NIH/UT8656]
Length = 252
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 120/194 (61%), Gaps = 31/194 (15%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q +++ + +KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKISLPNRIIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLVKAKHWVAELQRQASPGIVIALVGNKLDLCSET 134
Query: 129 ----------------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNV 160
DARK++ EA+AYA+E GL F ETSAKT TNV
Sbjct: 135 SGDSDATAESAENEEGGDSAEAEPTDSGDARKISTREAKAYAEEEGLLFFETSAKTGTNV 194
Query: 161 NDIFYEIAKRLPRV 174
D+F IA +P
Sbjct: 195 ADVFSAIANAIPET 208
>gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31 In Complex With A Gtp
Analogue
Length = 192
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 25 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 84
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 85 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 144
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N
Sbjct: 145 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHEN 192
>gi|395857349|ref|XP_003801059.1| PREDICTED: ras-related protein Rab-31 [Otolemur garnettii]
Length = 207
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
Query: 14 VLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 73
+ D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+H
Sbjct: 22 LFFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFH 81
Query: 74 SLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKV 133
SLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V
Sbjct: 82 SLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREV 141
Query: 134 TAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGER 192
++A+ YA+ G +ETSAK A N+ ++F I++R+P + P N SG + + + G +
Sbjct: 142 PLKDAKEYAESIGALVVETSAKNAINIEELFQGISRRIPPLDPHENGNSGAIKLGKAGTQ 201
Query: 193 TASASCC 199
AS CC
Sbjct: 202 -ASRRCC 207
>gi|395829258|ref|XP_003787777.1| PREDICTED: ras-related protein Rab-22A [Otolemur garnettii]
Length = 194
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 126/191 (65%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E CC
Sbjct: 186 PAE--PKRGCC 194
>gi|310789342|gb|EFQ24875.1| Ras family protein [Glomerella graminicola M1.001]
Length = 237
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 124/202 (61%), Gaps = 22/202 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSET 134
Query: 129 -----------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
DARKV+ EEA+ YA+E L F ETSAKT NV ++F IA +
Sbjct: 135 DSGSAGDSEGADADDSGDARKVSTEEAKTYAEEESLLFFETSAKTGHNVTEVFTAIANAI 194
Query: 172 PR--VQPAPNPSGMVLMDRPGE 191
P ++ A P + R GE
Sbjct: 195 PETSLKSARGPGASHAVSRGGE 216
>gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 120/161 (74%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLG+ G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DLLDAR
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDLLDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+V+ ++A+ YA F+ETSAK A N+N++F EI+KR+P
Sbjct: 127 EVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRIP 167
>gi|148747177|ref|NP_077756.2| ras-related protein Rab-22A [Mus musculus]
gi|46577691|sp|P35285.2|RB22A_MOUSE RecName: Full=Ras-related protein Rab-22A; Short=Rab-22; AltName:
Full=Rab-14
gi|13879258|gb|AAH06596.1| RAB22A, member RAS oncogene family [Mus musculus]
gi|14422309|emb|CAC41378.1| RAB22A protein [Mus musculus]
gi|26327515|dbj|BAC27501.1| unnamed protein product [Mus musculus]
gi|74144602|dbj|BAE27289.1| unnamed protein product [Mus musculus]
gi|74151840|dbj|BAE29707.1| unnamed protein product [Mus musculus]
gi|112293001|dbj|BAF02878.1| Rab22A [Mus musculus]
gi|148674704|gb|EDL06651.1| RAB22A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 194
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ--PAPNPSGMVLMDRP 189
+V +A+ YA F+ETSAK A N+N++F EI++R+P PA G L +P
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRRQP 186
Query: 190 GERTASASCC 199
E SCC
Sbjct: 187 SE--PKRSCC 194
>gi|194224580|ref|XP_001490105.2| PREDICTED: ras-related protein Rab-22A-like [Equus caballus]
Length = 194
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 126/191 (65%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELGQHGPPNIVVAIAGNKCDLVDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PRRSCC 194
>gi|238577909|ref|XP_002388536.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
gi|215449908|gb|EEB89466.1| hypothetical protein MPER_12432 [Moniliophthora perniciosa FA553]
Length = 243
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 3/164 (1%)
Query: 16 LGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHS 74
LG+ GKSSLVLRFVK QF +++ESTIGAAF +QT+ ++D T VKFEIWDTAGQERY
Sbjct: 51 LGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDGTTVKFEIWDTAGQERYK- 109
Query: 75 LAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVT 134
APMYYR A A++VYDIT AS E+A+ W++ELQ Q +P++V+AL GNK+DL R+VT
Sbjct: 110 -APMYYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNKSDLAARRQVT 168
Query: 135 AEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
EEA+ YA+E GL + ETSAKT V+DIF IAK+LP P P
Sbjct: 169 EEEAKKYAEEEGLMWGETSAKTGEGVSDIFTAIAKKLPLTAPPP 212
>gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sapiens]
Length = 194
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P A PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD-ANLPSGGKGFKLRKQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PKRSCC 194
>gi|302507208|ref|XP_003015565.1| hypothetical protein ARB_05876 [Arthroderma benhamiae CBS 112371]
gi|291179133|gb|EFE34920.1| hypothetical protein ARB_05876 [Arthroderma benhamiae CBS 112371]
Length = 231
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 138/214 (64%), Gaps = 26/214 (12%)
Query: 12 KLVLLGDVGA---------------GKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND 56
KLVLLG V SSLVLRFVK QF +++ESTIGAAF +QT+++++
Sbjct: 18 KLVLLGKVSRFNIADVRFKNEGFMLTTSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDE 77
Query: 57 AT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN 115
T VKFEIWDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ Q N N
Sbjct: 78 TTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANEN 137
Query: 116 MVMALAGNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
+++ALAGNK DL+ D R + +A AYA+E GL F ETSAKT+TNV ++F IAK+L
Sbjct: 138 IIIALAGNKLDLVNESPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKL 197
Query: 172 PRVQPAP-----NPSGMVLMDRPGERTASASCCS 200
P Q P NP V + RP CS
Sbjct: 198 PLDQAGPRNLRANPRPGVDL-RPESANTQGGACS 230
>gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncogene family [synthetic
construct]
gi|61370724|gb|AAX43543.1| RAB22A member RAS oncogene family [synthetic construct]
gi|61370733|gb|AAX43544.1| RAB22A member RAS oncogene family [synthetic construct]
Length = 195
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P A PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD-ANLPSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PKRSCC 194
>gi|291232375|ref|XP_002736136.1| PREDICTED: RAS-related protein RAB-22A-like [Saccoglossus
kowalevskii]
Length = 178
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 115/156 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL LLGD G GKSSLV RFV F + TIGA+F S+TL V+D + KF+IWDTAGQE+
Sbjct: 7 KLCLLGDSGVGKSSLVQRFVSDTFNTHSQPTIGASFMSKTLVVDDQSYKFQIWDTAGQEK 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y LAPMYYRGAAAAIIVYDIT ++SF K WV+EL+ G ++V+A+AGNKADL+D R
Sbjct: 67 YRGLAPMYYRGAAAAIIVYDITRESSFSAVKMWVRELEQYGPGDVVLAIAGNKADLVDQR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 167
+VT +EA YA + F+ETSAKTA NV +F I
Sbjct: 127 EVTYDEAHKYADQINATFVETSAKTAVNVTQLFTAI 162
>gi|336271401|ref|XP_003350459.1| hypothetical protein SMAC_02172 [Sordaria macrospora k-hell]
gi|380090981|emb|CCC11514.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 236
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 117/184 (63%), Gaps = 21/184 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSDS 133
Query: 129 ------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
DARK++ EEA+ YA+E GL F ETSAKT NV ++F IA
Sbjct: 134 AGTAEVSGDGDDNAEDSGDARKISTEEAKTYAEEEGLLFFETSAKTGHNVTEVFTAIANA 193
Query: 171 LPRV 174
+P
Sbjct: 194 IPET 197
>gi|85076611|ref|XP_955952.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
gi|28916987|gb|EAA26716.1| Rab5-like protein ypt51 [Neurospora crassa OR74A]
Length = 236
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 118/184 (64%), Gaps = 21/184 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSDS 133
Query: 129 ------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
DARK++ +EA+AYA+E GL F ETSAKT NV ++F IA
Sbjct: 134 AGSAEASGGGDDNAEDSGDARKISTDEAKAYAEEEGLLFFETSAKTGHNVTEVFTAIANA 193
Query: 171 LPRV 174
+P
Sbjct: 194 IPET 197
>gi|328856662|gb|EGG05782.1| hypothetical protein MELLADRAFT_77996 [Melampsora larici-populina
98AG31]
Length = 277
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 127/209 (60%), Gaps = 45/209 (21%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ KLVLLG+ GKSS+VLRFV+ F E +E TIGAAF +Q + D +KFEIWDTAG
Sbjct: 18 VQVKLVLLGEAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDKVIKFEIWDTAG 77
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QER+HSLAPMYYR A AA++ YD+T +S ++AK WV+ELQ QGNPN+V+AL GNK DL+
Sbjct: 78 QERFHSLAPMYYRNAQAAVVAYDVTKSSSLDKAKSWVKELQRQGNPNIVIALIGNKIDLV 137
Query: 129 -------------------DA--------------------------RKVTAEEAQAYAQ 143
DA R+V+ +EA+AYA+
Sbjct: 138 QQGSGSSSSGSSNGDDEADDATATPDNAAPAAGSSDSNTNPSASSSKRQVSKDEAEAYAK 197
Query: 144 ENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+ GL F ETSAKT V ++F +IA ++P
Sbjct: 198 DAGLLFFETSAKTGEGVVEVFTQIAAKIP 226
>gi|10190714|ref|NP_065724.1| ras-related protein Rab-22A [Homo sapiens]
gi|13633614|sp|Q9UL26.2|RB22A_HUMAN RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
gi|9961232|gb|AAF00047.2|AF091034_1 GTP-binding protein RAB22A [Homo sapiens]
gi|16041684|gb|AAH15710.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|30582931|gb|AAP35695.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|39645547|gb|AAH63457.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|61361041|gb|AAX41977.1| RAB22A member RAS oncogene family [synthetic construct]
gi|119595902|gb|EAW75496.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595903|gb|EAW75497.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193787092|dbj|BAG52298.1| unnamed protein product [Homo sapiens]
gi|208967238|dbj|BAG73633.1| RAB22A, member RAS oncogene family [synthetic construct]
Length = 194
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P A PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD-ANLPSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PKRSCC 194
>gi|336469296|gb|EGO57458.1| hypothetical protein NEUTE1DRAFT_146066 [Neurospora tetrasperma
FGSC 2508]
gi|350291070|gb|EGZ72284.1| Rab5-like protein ypt51 [Neurospora tetrasperma FGSC 2509]
Length = 236
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 118/184 (64%), Gaps = 21/184 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTSDS 133
Query: 129 ------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
DARK++ +EA+AYA+E GL F ETSAKT NV ++F IA
Sbjct: 134 AGSAEVSGGGDDNAEDSGDARKISTDEAKAYAEEEGLLFFETSAKTGHNVTEVFTAIANA 193
Query: 171 LPRV 174
+P
Sbjct: 194 IPET 197
>gi|301759461|ref|XP_002915568.1| PREDICTED: ras-related protein Rab-22A-like [Ailuropoda
melanoleuca]
Length = 194
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 126/191 (65%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL L+ D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KLCLIQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADTNP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PQRSCC 194
>gi|196003396|ref|XP_002111565.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
gi|190585464|gb|EDV25532.1| hypothetical protein TRIADDRAFT_50216 [Trichoplax adhaerens]
Length = 163
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/157 (58%), Positives = 117/157 (74%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL LLGD G GKSSLVLRFV F ESTIGA+F S+T+ VN+ + K++IWDTAGQE+
Sbjct: 7 KLCLLGDAGVGKSSLVLRFVCDTFNACSESTIGASFMSKTIEVNEQSYKYQIWDTAGQEK 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y LAPMYYRGAAAAI+V+DIT + SF K WV+ELQ G PN+VMA+AGNK+DL + R
Sbjct: 67 YRGLAPMYYRGAAAAIVVFDITREESFHTLKDWVKELQQLGPPNLVMAIAGNKSDLDEMR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
+V++ +A+ +A F ETSA TA NV ++F EI+
Sbjct: 127 EVSSHDARTFADSVDALFAETSALTAKNVLELFVEIS 163
>gi|269861848|ref|XP_002650604.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
gi|220065897|gb|EED43454.1| hypothetical protein EBI_21682 [Enterocytozoon bieneusi H348]
Length = 191
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 120/168 (71%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV+LG GKSS+VL F+K +F +ESTIGAAF ++T+ ++ VKFEIWDTAGQER
Sbjct: 13 KLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAAFLTKTVFIDGTAVKFEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y+SL PMYYRGA AA++VYDIT+ SFERAK+W+++L+ + N + L GNK DL +A
Sbjct: 73 YYSLIPMYYRGANAALVVYDITSAESFERAKRWIEDLKTEKPDNFMKVLIGNKVDLSEAA 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+T E + YA++ GL F +TSAKT + D+F E+A LP+ Q N
Sbjct: 133 VITEEMGKQYAEQEGLLFYQTSAKTGEGIKDLFLELATILPKDQAKSN 180
>gi|342319556|gb|EGU11504.1| GTP-binding protein RAB5 [Rhodotorula glutinis ATCC 204091]
Length = 211
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 123/165 (74%), Gaps = 4/165 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VL+FVK QF E++ESTIGAAF +QT+ V IWDTAGQER
Sbjct: 17 KLVLLGESAVGKSSIVLQFVKKQFDEWRESTIGAAFLTQTVPVKSGNF---IWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYR A AA++ +DIT+ ASFE+A+ W+ ELQ Q +P +V+ LAGNK DL+ R
Sbjct: 74 YKSLAPMYYRSAHAAVVAFDITSSASFEKARSWIAELQRQADPGIVIVLAGNKLDLVSQR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
+V+ +A+ +A+E GL + E SAKTA + ++F +A+++P ++P
Sbjct: 134 QVSTADAEQFAREEGLLYFEVSAKTAEGIEEMFQTVAEKMP-IEP 177
>gi|296818687|ref|XP_002849680.1| GTP-binding protein ypt5 [Arthroderma otae CBS 113480]
gi|238840133|gb|EEQ29795.1| GTP-binding protein ypt5 [Arthroderma otae CBS 113480]
Length = 206
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 131/187 (70%), Gaps = 11/187 (5%)
Query: 24 SSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRG 82
SSLVLRFVK QF +++ESTIGAAF +QT+++++ T VKFEIWDTAGQERY SLAPMYYR
Sbjct: 20 SSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDTAGQERYKSLAPMYYRN 79
Query: 83 AAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL----DARKVTAEEA 138
A A++VYDIT AS ++AK WV+ELQ Q N N+++ALAGNK DL+ D R V +A
Sbjct: 80 ANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLDLVSESPDKRAVETADA 139
Query: 139 QAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPSGMVLMDRPGERT 193
AYA+E GL F ETSAKT+TNV ++F IAK+LP Q P NP V + RP
Sbjct: 140 AAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRANPRPGVDL-RPESAN 198
Query: 194 ASASCCS 200
CS
Sbjct: 199 TQGGACS 205
>gi|355562999|gb|EHH19561.1| Ras-related protein Rab-22A, partial [Macaca mulatta]
gi|355784359|gb|EHH65210.1| Ras-related protein Rab-22A, partial [Macaca fascicularis]
Length = 188
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 126/191 (65%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
+L+L D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 1 RLILFQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 60
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 61 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 120
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 121 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQ 179
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 180 PSE--PKRSCC 188
>gi|380474214|emb|CCF45899.1| GTP-binding protein ypt5 [Colletotrichum higginsianum]
Length = 242
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 134/207 (64%), Gaps = 32/207 (15%)
Query: 12 KLVLLGDVGAGKSSL----------VLRFVK-----------GQFIEFQESTIGAAFFSQ 50
KLVLLG+ GK + VL F K QF ++ESTIGAAF +Q
Sbjct: 22 KLVLLGESAVGKXFICPSLIETLYAVLIFFKRQSANGAPSSQDQFDSYRESTIGAAFLTQ 81
Query: 51 TLAVND-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ 109
T+++++ TVKFEIWDTAGQERY SLAPMYYR A A++VYDIT AS ++AK WV+ELQ
Sbjct: 82 TISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQ 141
Query: 110 AQGNPNMVMALAGNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY 165
Q N N+++ALAGNK DL+ D R V+ +A+AYA+E GL F ETSAKTA NV ++F
Sbjct: 142 RQANENIIIALAGNKLDLVTEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVKELFT 201
Query: 166 EIAKRLPRVQPAPNPSGMVLMDRPGER 192
IAK+LP Q P + RPG+R
Sbjct: 202 AIAKKLPLDQAGPRHA------RPGQR 222
>gi|344303655|gb|EGW33904.1| hypothetical protein SPAPADRAFT_59281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 116/172 (67%), Gaps = 11/172 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + + T+K+EIWDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQER 70
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AAI+VYDIT ASF +A+ WV+EL Q ++ +AL GNK DL+
Sbjct: 71 FASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQAAKDITIALVGNKYDLVQDD 130
Query: 130 ---------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
RKV+ EE Q A E GL F ETSAKT+ NVND+F I ++P
Sbjct: 131 DEGQGEREGVRKVSVEEGQNLAAEEGLLFYETSAKTSYNVNDVFIGIGNKIP 182
>gi|302903042|ref|XP_003048772.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
gi|256729706|gb|EEU43059.1| hypothetical protein NECHADRAFT_62851 [Nectria haematococca mpVI
77-13-4]
Length = 236
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 117/182 (64%), Gaps = 19/182 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTGDS 134
Query: 129 ----------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
DARKV+ EEAQ+YA+E L F ETSAK+ NV ++F IA +P
Sbjct: 135 GAAADSQNGDDGEESGDARKVSTEEAQSYAEEESLLFFETSAKSGHNVTEVFTAIANAIP 194
Query: 173 RV 174
Sbjct: 195 ET 196
>gi|346319675|gb|EGX89276.1| Rab5-like protein ypt51 [Cordyceps militaris CM01]
Length = 233
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 121/191 (63%), Gaps = 19/191 (9%)
Query: 1 MATTGN---KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA 57
MA TGN + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q +
Sbjct: 1 MADTGNGPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTR 60
Query: 58 TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMV 117
T+KFEIWDTAGQER+ SLAPMYYR A AA++VYDIT S +AK WV ELQ Q +P +V
Sbjct: 61 TIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLIKAKHWVAELQRQASPGIV 120
Query: 118 MALAGNKADLLD----------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVN 161
+AL GNK DL ARKV EEA+ YA++ L F ETSAKT NV
Sbjct: 121 IALVGNKLDLASESAGGDNGDDGDDSGDARKVPTEEAKTYAEDESLLFFETSAKTGVNVT 180
Query: 162 DIFYEIAKRLP 172
++F IA +P
Sbjct: 181 EVFTAIANAIP 191
>gi|367026926|ref|XP_003662747.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila ATCC
42464]
gi|347010016|gb|AEO57502.1| hypothetical protein MYCTH_2303725 [Myceliophthora thermophila ATCC
42464]
Length = 233
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 117/182 (64%), Gaps = 19/182 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL D
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLADDG 133
Query: 130 -----------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
ARK++ EEA+ YA+E GL F ETSAKT NV ++F IA +P
Sbjct: 134 AGSGGDAEDAGGEESGNARKISTEEAKTYAEEEGLLFFETSAKTGYNVTEVFTAIANAIP 193
Query: 173 RV 174
Sbjct: 194 ET 195
>gi|355714872|gb|AES05145.1| RAB22A, member RAS oncoprotein family [Mustela putorius furo]
Length = 193
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PSG
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADANP-PSG 176
>gi|410919323|ref|XP_003973134.1| PREDICTED: ras-related protein Rab-22A-like [Takifugu rubripes]
Length = 194
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 120/163 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLG+ G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF+ K WV+EL+ G PN+V+A+AGNK DL DAR
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
+V+ ++A+ YA F+ETSAK A N+N++F EI+KR+P V
Sbjct: 127 EVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRIPAV 169
>gi|1710019|sp|P51154.1|RB22A_CANFA RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
Length = 194
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 126/191 (65%), Gaps = 6/191 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQE
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEA 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDR 188
+V +A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADANP-PSGGKGFKLRRQ 185
Query: 189 PGERTASASCC 199
P E SCC
Sbjct: 186 PSE--PQRSCC 194
>gi|293332195|ref|NP_001169100.1| uncharacterized protein LOC100382944 [Zea mays]
gi|223974943|gb|ACN31659.1| unknown [Zea mays]
gi|358365497|dbj|GAA82119.1| RAB GTPase Vps21/Ypt51 [Aspergillus kawachii IFO 4308]
Length = 262
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 118/200 (59%), Gaps = 39/200 (19%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q ++ T+KFEIWDTAGQER
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPTRTIKFEIWDTAGQER 76
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T +S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 77 FASLAPMYYRNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPGIVIALVGNKLDLTNDG 136
Query: 129 ------------------------------------DARKVTAEEAQAYAQENGLFFMET 152
DARKV EA AYA+E GL F ET
Sbjct: 137 NEAAGESPADAEGESSTADADETAEEPQEAQDVTSGDARKVPTREASAYAEEEGLLFFET 196
Query: 153 SAKTATNVNDIFYEIAKRLP 172
SAKT TNV D+F IA +P
Sbjct: 197 SAKTGTNVVDVFTAIANAIP 216
>gi|145232756|ref|XP_001399777.1| vacuolar protein sorting-associated protein 21 [Aspergillus niger
CBS 513.88]
gi|134056697|emb|CAL00639.1| unnamed protein product [Aspergillus niger]
gi|350634623|gb|EHA22985.1| hypothetical protein ASPNIDRAFT_197381 [Aspergillus niger ATCC
1015]
Length = 262
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 118/200 (59%), Gaps = 39/200 (19%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q ++ T+KFEIWDTAGQER
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPTRTIKFEIWDTAGQER 76
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T +S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 77 FASLAPMYYRNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPGIVIALVGNKLDLTNDG 136
Query: 129 ------------------------------------DARKVTAEEAQAYAQENGLFFMET 152
DARKV EA AYA+E GL F ET
Sbjct: 137 NEATGESPADAEGESSTADADETAEEPQEAQDVTSGDARKVPTREASAYAEEEGLLFFET 196
Query: 153 SAKTATNVNDIFYEIAKRLP 172
SAKT TNV D+F IA +P
Sbjct: 197 SAKTGTNVVDVFTAIANAIP 216
>gi|353236709|emb|CCA68698.1| probable VPS21-Rab5-like GTPase involved in vacuolar protein
sorting [Piriformospora indica DSM 11827]
Length = 252
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 127/214 (59%), Gaps = 42/214 (19%)
Query: 1 MATTGN---KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA 57
MA T + K I KLVLLG+ GKSS+V+RFV +F +E TIGAAF +Q + D
Sbjct: 1 MADTSDATQKPIQVKLVLLGEAAVGKSSVVMRFVNNEFQANKEPTIGAAFLTQKCRLEDR 60
Query: 58 TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMV 117
+++EIWDTAGQER+HSLAPMYYR A AA++VYDIT AS E+AK WV+ELQ Q NPN+V
Sbjct: 61 VLRYEIWDTAGQERFHSLAPMYYRNAQAAVVVYDITKAASLEKAKSWVKELQRQANPNIV 120
Query: 118 MALAGNKADLLDA---------------------------------------RKVTAEEA 138
+ALAGNK DL+ R+V +EA
Sbjct: 121 IALAGNKLDLVTGQASTPGTSAAASSADDEDEADDATATPGETEEEAGSESLRQVPKDEA 180
Query: 139 QAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
AYA E GL F E SAKT + ++F +IAK++P
Sbjct: 181 MAYATEAGLLFTEISAKTGEGIVELFTDIAKKIP 214
>gi|116191911|ref|XP_001221768.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181586|gb|EAQ89054.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 204
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 116/181 (64%), Gaps = 18/181 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNDG 133
Query: 129 ---------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DARK+T EEA+ YA+E L F ETSAKT NV ++F IA +P
Sbjct: 134 AGNGGDVDAGGEDSGDARKITTEEAKTYAEEESLLFFETSAKTGYNVTEVFTAIANAIPE 193
Query: 174 V 174
Sbjct: 194 T 194
>gi|320593406|gb|EFX05815.1| rab GTPase vps21 [Grosmannia clavigera kw1407]
Length = 240
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 116/184 (63%), Gaps = 21/184 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL---- 127
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 73 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTDSG 132
Query: 128 -----------------LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
DARKV+ EEA+ YA E L F ETSAKT TNV ++F IA
Sbjct: 133 GAATPNPDAEAGDEAESTDARKVSTEEARTYADEESLLFFETSAKTGTNVAEVFTAIANA 192
Query: 171 LPRV 174
+P
Sbjct: 193 IPET 196
>gi|400601582|gb|EJP69225.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 232
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 116/177 (65%), Gaps = 16/177 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYDIT S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDITKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLASES 134
Query: 130 --------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
ARKV +EA+AYA+E L F ETSAKT NV+++F IA +P
Sbjct: 135 ASGDNGDDGDDSGDARKVPTDEAKAYAEEESLLFFETSAKTGVNVSEVFTAIANAIP 191
>gi|50288533|ref|XP_446696.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526004|emb|CAG59623.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 126/212 (59%), Gaps = 24/212 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA----TVKFEIWDTA 67
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQT+ + D +KFEIWDTA
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQTVKIKDGNEDVVIKFEIWDTA 64
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKAD 126
GQERY SLAPMYYR A AA++VYD+T S +A+ WVQELQ + G+ +V+ L GNK D
Sbjct: 65 GQERYKSLAPMYYRNANAALVVYDVTQPDSLSKAQSWVQELQNKVGDEELVIYLVGNKVD 124
Query: 127 LLD----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL----------- 171
+++ ARK+ EE YAQ L F E SAKT V DIF EI ++L
Sbjct: 125 IVEADESARKIETEEGAEYAQAQKLLFKEVSAKTGAGVKDIFQEIGEQLYSTKKASLKNK 184
Query: 172 ---PRVQPAPNPSGMVLMDRPGERTASASCCS 200
R + + + RP S SCCS
Sbjct: 185 DQSRRTDSVSSNTVDIQTQRPSTNDTS-SCCS 215
>gi|390473801|ref|XP_002757097.2| PREDICTED: ras-related protein Rab-31-like [Callithrix jacchus]
Length = 200
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 123/187 (65%)
Query: 13 LVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72
+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+
Sbjct: 14 ICLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 73
Query: 73 HSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK 132
HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+
Sbjct: 74 HSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 133
Query: 133 VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGER 192
V ++A+ YA+ G +ETSAK A N+ ++F I++++P + N + +
Sbjct: 134 VPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDHHENGNNGAIKLVKQTT 193
Query: 193 TASASCC 199
AS CC
Sbjct: 194 QASRRCC 200
>gi|431896339|gb|ELK05755.1| Ras-related protein Rab-31 [Pteropus alecto]
Length = 215
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 124/188 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
++ L+ D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 28 RMALILDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 87
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 88 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 147
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N + +
Sbjct: 148 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAMKLGKQA 207
Query: 192 RTASASCC 199
AS CC
Sbjct: 208 TQASRRCC 215
>gi|397475954|ref|XP_003809378.1| PREDICTED: ras-related protein Rab-31 [Pan paniscus]
Length = 191
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 127/186 (68%), Gaps = 2/186 (1%)
Query: 15 LLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHS 74
L D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HS
Sbjct: 7 LTPDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHS 66
Query: 75 LAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVT 134
LAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V
Sbjct: 67 LAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVP 126
Query: 135 AEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGERT 193
++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + +++P +
Sbjct: 127 LKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQ- 185
Query: 194 ASASCC 199
AS CC
Sbjct: 186 ASRRCC 191
>gi|50557054|ref|XP_505935.1| YALI0F27181p [Yarrowia lipolytica]
gi|49651805|emb|CAG78747.1| YALI0F27181p [Yarrowia lipolytica CLIB122]
Length = 207
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 134/192 (69%), Gaps = 5/192 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQE 70
KLVLLG+ GKSSLV RFVK +F+E +ESTIGAAF +QT+++ D TV+FEIWDTAGQE
Sbjct: 16 KLVLLGESFVGKSSLVTRFVKDEFLEQRESTIGAAFLTQTVSLEDNKTVRFEIWDTAGQE 75
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SLAPMYYR A A++VYDIT +S ER+K WV+ELQ + +++ LAGNK DL D
Sbjct: 76 RYKSLAPMYYRNANCAVVVYDITQASSLERSKAWVKELQHRAADGIIIGLAGNKLDLEDK 135
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP----RVQPAPNPSGMVLM 186
R+V EEA+AYA+E GL F ETSA T NV ++F EIA+++P +P + G+ L
Sbjct: 136 REVPTEEARAYAEEAGLLFFETSALTGENVLELFTEIARKVPFENSTARPRMSAKGVDLN 195
Query: 187 DRPGERTASASC 198
G +C
Sbjct: 196 KNGGTEAQGCNC 207
>gi|380488839|emb|CCF37107.1| Ras family protein [Colletotrichum higginsianum]
Length = 236
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 116/183 (63%), Gaps = 20/183 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNDA 134
Query: 129 -----------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
DARK++ EEA+ YA+E L F ETSAKT NV ++F IA +
Sbjct: 135 ESGSAGDNEEADGEDSGDARKISTEEAKTYAEEESLLFFETSAKTGHNVTEVFTAIANAI 194
Query: 172 PRV 174
P
Sbjct: 195 PET 197
>gi|156051994|ref|XP_001591958.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154705182|gb|EDO04921.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 241
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 125/205 (60%), Gaps = 25/205 (12%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A +A++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 76 FASLAPMYYRNAQSALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNES 135
Query: 129 --------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
DARKV+ EA++YA+E GL F ETSAK TNV ++F IA
Sbjct: 136 DDSNNNLGDEESAEGEDSGGDARKVSTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIA 195
Query: 169 KRLPR--VQPAPNPSGMVLMDRPGE 191
+P ++ A P G+ GE
Sbjct: 196 NAIPETSLKGARGPGGVQASSARGE 220
>gi|224046076|ref|XP_002190163.1| PREDICTED: ras-related protein Rab-31 [Taeniopygia guttata]
Length = 195
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 124/188 (65%), Gaps = 1/188 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N M +AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENNAMPIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-NPSGMVLMDRPG 190
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P + +G + + R
Sbjct: 128 EVPMKDAKEYAESIGAIVVETSAKNAVNIEELFQGISQQIPPLDPHEISNNGAIKLGRQT 187
Query: 191 ERTASASC 198
+T C
Sbjct: 188 SQTGRRCC 195
>gi|410083613|ref|XP_003959384.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
gi|372465975|emb|CCF60249.1| hypothetical protein KAFR_0J01850 [Kazachstania africana CBS 2517]
Length = 209
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 132/200 (66%), Gaps = 11/200 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ T+KFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINNNTIKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYDIT SF +A+ WV+EL Q + ++++AL GNK D+++
Sbjct: 69 FASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKDIIIALVGNKVDIIEND 128
Query: 130 --ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD 187
RKV EE + A+E GL F ETSAKTA NVND+F I +++P +P+ + +
Sbjct: 129 ESERKVAREEGERLAEEEGLIFFETSAKTAENVNDVFLNIGEKIPLKNDNSSPNDTTITE 188
Query: 188 R-------PGERTASASCCS 200
T+ AS CS
Sbjct: 189 DQRINLAASANATSEASSCS 208
>gi|354492620|ref|XP_003508445.1| PREDICTED: ras-related protein Rab-31-like [Cricetulus griseus]
Length = 203
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 126/186 (67%), Gaps = 6/186 (3%)
Query: 17 GDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLA 76
GD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLA
Sbjct: 21 GDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA 80
Query: 77 PMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAE 136
PMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V +
Sbjct: 81 PMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLK 140
Query: 137 EAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGERTAS 195
+A+ YA+ G +ETSAK A N+ ++F I++++P + P N SG + R G ++
Sbjct: 141 DAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGI---RLGTQSLQ 197
Query: 196 AS--CC 199
AS CC
Sbjct: 198 ASRRCC 203
>gi|405960207|gb|EKC26148.1| Ras-related protein Rab-5B [Crassostrea gigas]
Length = 818
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 135/236 (57%), Gaps = 45/236 (19%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
K+ KLVLLG+ G GKSS+ LRFV+G+F E E+TIGAA+ ++T+ V ++T +KF+IWD
Sbjct: 582 KSKQIKLVLLGESGVGKSSIALRFVRGEFNENGEATIGAAYLTKTINVQNSTAIKFDIWD 641
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYHSLAPMYYRGA AA++VYDIT+Q SF RA+ WV+EL Q N +V+AL GNKA
Sbjct: 642 TAGQERYHSLAPMYYRGAPAAVVVYDITSQTSFSRAQAWVKELTQQANSQIVIALVGNKA 701
Query: 126 DLL-------------------------------------------DARKVTAEEAQAYA 142
D+ D R V E+ + +A
Sbjct: 702 DMASEGRVIPTEVSFKEAQRWTREIIDFGGSCSYIILLGNKSDLSNDLRAVPYEDGKEFA 761
Query: 143 QENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASC 198
NGL F E SAKT NV+D+F +A ++ Q +P + + ERT C
Sbjct: 762 SNNGLMFTEVSAKTGMNVDDVFTNLAAKIA-AQSSPESNSTTVRPTNVERTEKGGC 816
>gi|410335381|gb|JAA36637.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 196
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 127/193 (65%), Gaps = 8/193 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA--KRLPRVQPAPNPS---GMVLM 186
+V +A+ YA F+ETSAK A N+N++F EI+ +R+P P PS G L
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISLGRRIPSTDANP-PSGGKGFKLR 185
Query: 187 DRPGERTASASCC 199
+P E SCC
Sbjct: 186 RQPSE--PKRSCC 196
>gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens]
Length = 194
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
+V +A+ YA F+ETSAK A N+N++F EI++R+P A PSG
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD-ANLPSG 176
>gi|58261772|ref|XP_568296.1| GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134118345|ref|XP_772186.1| hypothetical protein CNBM1050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254794|gb|EAL17539.1| hypothetical protein CNBM1050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230469|gb|AAW46779.1| GTPase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 252
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 134/245 (54%), Gaps = 52/245 (21%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K + KLVLLG+ GKSSLVLRF G F E TIGAAF +Q + + VKFEIWDT
Sbjct: 8 KAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGAAFLTQKCRLENRIVKFEIWDT 67
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A AA++VYD+T AS E+AK WV+ELQ Q N N+V+AL GNK D
Sbjct: 68 AGQERFHSLAPMYYRNAQAAVVVYDVTKSASLEKAKAWVKELQRQANANIVIALVGNKLD 127
Query: 127 LL---------------------------------------DARKVTAEEAQAYAQENGL 147
L+ D R+V EA+AYA+E GL
Sbjct: 128 LVSAAPSTSASSSSETPAEGEGEADAEAEEESSPAAAADDEDVRQVPTAEAEAYAKEAGL 187
Query: 148 FFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDR-------------PGERTA 194
F E SAK TNVN++F EIAK +P P P+G+ +R G++
Sbjct: 188 LFFEASAKAGTNVNELFTEIAKTIPFDTIIPKPAGVAQQNRRDAAQDGNRVNLGEGQQVK 247
Query: 195 SASCC 199
CC
Sbjct: 248 KGGCC 252
>gi|221123404|ref|XP_002154758.1| PREDICTED: ras-related protein Rab-22A-like [Hydra magnipapillata]
Length = 196
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 119/161 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL LLGD G GKSSLVLRFV +F +TIGA+F S+T+++ + + K++IWDTAGQE+
Sbjct: 10 KLCLLGDSGVGKSSLVLRFVTDRFDIQSTATIGASFMSKTISLGENSYKYQIWDTAGQEK 69
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYRGAAAAI+VYD+T + +F+ K WV+EL+ G P +V+A+AGNK+DL D R
Sbjct: 70 YKSLAPMYYRGAAAAIVVYDLTVENTFKSVKTWVRELRELGPPGLVIAIAGNKSDLKDQR 129
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+V+ E + YA E G F E SA T+ NV IF EI K+LP
Sbjct: 130 EVSLEAGENYASEIGAVFAEVSALTSQNVAYIFQEITKKLP 170
>gi|366990719|ref|XP_003675127.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
gi|342300991|emb|CCC68756.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
Length = 212
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 118/165 (71%), Gaps = 4/165 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +ND TVKFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINDNTVKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA+IVYD+T SF +A+ W++EL Q N +M++AL GNK D+L
Sbjct: 69 FASLAPMYYRNAQAALIVYDVTKPQSFIKARHWIKELHEQANKDMIIALVGNKVDVLENN 128
Query: 129 -DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
D RKV EE + A+E GL F ETSAKT NV + F I +++P
Sbjct: 129 EDERKVAREEGEKLAEEEGLLFFETSAKTGLNVTETFVAIGEKIP 173
>gi|255728925|ref|XP_002549388.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
gi|240133704|gb|EER33260.1| GTP-binding protein ypt5 [Candida tropicalis MYA-3404]
Length = 207
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 123/194 (63%), Gaps = 6/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +Q++ + T+KFEIWDTAGQ
Sbjct: 14 KLVLLGESAVGKSSIVHRFVKNSFDDLRESTIGAAFLTQSITIPETQTTIKFEIWDTAGQ 73
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQA-QGNPNMVMALAGNKADLL 128
ERY SLAPMYYR + AAI+VYDIT +S +RAK W++EL+ N +++AL GNK DL
Sbjct: 74 ERYKSLAPMYYRNSHAAIVVYDITKTSSLQRAKDWIEELRKNSSNDGIIIALVGNKLDLQ 133
Query: 129 DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR---VQPAPNPSGMVL 185
D R++ + + YA E L E SAK+ V+DIF IA++L VQ P + L
Sbjct: 134 DEREIEQSDVEEYATEQNLLSFECSAKSGEGVHDIFDAIARKLSDKIAVQEVPETRRIDL 193
Query: 186 MDRPGERTASASCC 199
+ SCC
Sbjct: 194 NRNATANNNNNSCC 207
>gi|405123574|gb|AFR98338.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 254
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 134/247 (54%), Gaps = 54/247 (21%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K + KLVLLG+ GKSSLVLRF G F E TIGAAF +Q + + VKFEIWDT
Sbjct: 8 KAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGAAFLTQKCRLENRIVKFEIWDT 67
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A AA++VYDIT AS E+AK WV+ELQ Q N N+V+AL GNK D
Sbjct: 68 AGQERFHSLAPMYYRNAQAAVVVYDITKAASLEKAKAWVKELQRQANANIVIALVGNKLD 127
Query: 127 LL-----------------------------------------DARKVTAEEAQAYAQEN 145
L+ D R+V EA+AYA+E
Sbjct: 128 LVSAAPSTSASSSSETPAEGDDEADAEAQEEEESSPAAAADDEDVRQVPTAEAEAYAKEA 187
Query: 146 GLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDR-------------PGER 192
GL F E SAK TNVN++F EIAK +P P P+G +R G++
Sbjct: 188 GLLFFEASAKAGTNVNELFTEIAKTIPFDTITPKPAGGAQQNRRDAAQDGNRVNLGEGQQ 247
Query: 193 TASASCC 199
A CC
Sbjct: 248 AKKAGCC 254
>gi|82794111|ref|XP_728308.1| Rab5c GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23484593|gb|EAA19873.1| Rab5c GTPase-related [Plasmodium yoelii yoelii]
Length = 182
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 121/169 (71%), Gaps = 1/169 (0%)
Query: 17 GDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLA 76
GD GKS +V+RF K +F E+QESTIGAAF +Q + + + T+KFEIWDTAGQERY SLA
Sbjct: 12 GDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQERYRSLA 71
Query: 77 PMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL-LDARKVTA 135
PMYYRGAAAA+IVYDITN+ SFE AK W+ EL++ + ++V+ A + + A +
Sbjct: 72 PMYYRGAAAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIVIGYIHTCACIRVCAYIFSF 131
Query: 136 EEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
A+++A N + F+ETSAKT TNVND+F +IAK+LPR + + G +
Sbjct: 132 SLAESFANSNNILFIETSAKTGTNVNDLFLKIAKKLPRNKKDKDTFGGI 180
>gi|443701022|gb|ELT99690.1| hypothetical protein CAPTEDRAFT_6450 [Capitella teleta]
Length = 169
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 114/158 (72%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KL LLGD G GKSS+V RFV F STIGAAF ++T+ V+ T K++IWDTAGQE+
Sbjct: 7 KLCLLGDSGVGKSSIVHRFVYDSFRPAMTSTIGAAFLTKTVIVDGTTYKYQIWDTAGQEK 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y +LAPMYYRGAAAAIIVYDIT ++SF K W+ ELQ +PN+V+A+AGNK DL D R
Sbjct: 67 YRALAPMYYRGAAAAIIVYDITQESSFRATKSWITELQKHASPNIVLAIAGNKLDLDDLR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
V A +YA + G F+ETSAK+A N+ +F EI++
Sbjct: 127 DVQYSTALSYADKQGTVFVETSAKSAANIPALFMEISE 164
>gi|403265333|ref|XP_003924897.1| PREDICTED: ras-related protein Rab-31 [Saimiri boliviensis
boliviensis]
Length = 191
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 125/183 (68%), Gaps = 2/183 (1%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAP
Sbjct: 10 DTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAP 69
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++
Sbjct: 70 MYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKD 129
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGERTASA 196
A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + +P + AS
Sbjct: 130 AKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLVKPTTQ-ASR 188
Query: 197 SCC 199
CC
Sbjct: 189 RCC 191
>gi|281339724|gb|EFB15308.1| hypothetical protein PANDA_010679 [Ailuropoda melanoleuca]
Length = 185
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 121/185 (65%)
Query: 15 LLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHS 74
L D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HS
Sbjct: 1 LFQDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHS 60
Query: 75 LAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVT 134
LAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V
Sbjct: 61 LAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVP 120
Query: 135 AEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTA 194
++A+ YA+ G +ETSAK A N+ ++F I++++P + P N + + A
Sbjct: 121 LKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQATQA 180
Query: 195 SASCC 199
S CC
Sbjct: 181 SRRCC 185
>gi|345328282|ref|XP_001510989.2| PREDICTED: ras-related protein Rab-22A-like [Ornithorhynchus
anatinus]
Length = 241
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 119/182 (65%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAP
Sbjct: 60 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAP 119
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+V ++
Sbjct: 120 MYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMEKD 179
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASAS 197
A+ YA F+ETSAK A N+N++F EI++R+P P SG R S
Sbjct: 180 AKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDTNPPSSGKGFKLRRQATVPKRS 239
Query: 198 CC 199
CC
Sbjct: 240 CC 241
>gi|303390262|ref|XP_003073362.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303302508|gb|ADM12002.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 197
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 123/181 (67%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSSLVL++VKG+F +ESTIGA+F ++T+ + ++KFEIWDT
Sbjct: 9 KTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTPEGSIKFEIWDT 68
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+IVYDIT+ SFE AK+WV+EL + + L GNK+D
Sbjct: 69 AGQERYNSLIPMYYRGAQVALIVYDITSVESFETAKRWVEELSFEKPREFIKVLIGNKSD 128
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L + RKV ++ + YA L F E+SAKT N+ +IF IA+++P+ + N G L
Sbjct: 129 LEEDRKVEFQQGKEYADSQNLLFFESSAKTGKNIAEIFNAIAEKVPKEEVKKNTKGFRLR 188
Query: 187 D 187
D
Sbjct: 189 D 189
>gi|326917442|ref|XP_003205008.1| PREDICTED: ras-related protein Rab-31-like [Meleagris gallopavo]
Length = 236
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAP
Sbjct: 55 DTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAP 114
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++
Sbjct: 115 MYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKD 174
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRPGERTASA 196
A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + R +T
Sbjct: 175 AKEYAESIGAIVVETSAKNAVNIEELFQGISQQIPPLDPHENGNNGAIKLGRQTSQTGRR 234
Query: 197 SC 198
C
Sbjct: 235 CC 236
>gi|453088930|gb|EMF16970.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 316
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 122/193 (63%), Gaps = 21/193 (10%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA + + KLVLLG+ GKSSLVLRFV F +E TIGAAF +Q + + T+K
Sbjct: 80 MADAPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQPNKEPTIGAAFLTQKCQLPNRTIK 139
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQER+ SLAPMYYR A +A++VYDIT +S +A+ WV ELQ Q +P +V+AL
Sbjct: 140 FEIWDTAGQERFASLAPMYYRNAQSALVVYDITKPSSLVKARHWVAELQRQASPGIVIAL 199
Query: 121 AGNKADLLD---------------------ARKVTAEEAQAYAQENGLFFMETSAKTATN 159
GNK DL + RKV+++EA+AYA E L F ETSAKT N
Sbjct: 200 VGNKLDLCEDDAPEGEQQESENAEEEDTGAVRKVSSKEAKAYADEESLLFFETSAKTGHN 259
Query: 160 VNDIFYEIAKRLP 172
V+++F IA +P
Sbjct: 260 VSEVFTAIANAIP 272
>gi|291190727|ref|NP_001167048.1| Ras-related protein Rab-31 [Salmo salar]
gi|223647850|gb|ACN10683.1| Ras-related protein Rab-31 [Salmo salar]
Length = 194
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT SF+ KKWV+EL+ G ++V+A+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
+V +EA+ +A+ FMETSA+ A NV ++F +I+K++P P NP
Sbjct: 127 EVPMKEAKDFAESIAAIFMETSARNAVNVEELFQKISKQIP---PLENP 172
>gi|367012904|ref|XP_003680952.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
gi|359748612|emb|CCE91741.1| hypothetical protein TDEL_0D01570 [Torulaspora delbrueckii]
Length = 217
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 117/173 (67%), Gaps = 13/173 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA------TVKFEIWD 65
KLVLLGD GKSS+V RFVK F EF+ESTIGAAF SQT+ V ++ +KFEIWD
Sbjct: 5 KLVLLGDSSVGKSSIVYRFVKNSFDEFRESTIGAAFLSQTIKVKESDDGEETVIKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNK 124
TAGQERY SLAPMYYR A AA++VYD+T Q S +A+ WV EL+ + G+ ++V+ L GNK
Sbjct: 65 TAGQERYKSLAPMYYRNANAALVVYDVTQQDSLVKAQSWVNELKNKVGDDDLVICLVGNK 124
Query: 125 ADLLD------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
DL D R V EEA++YA E L F E SAKT NV IF I ++L
Sbjct: 125 VDLCDEDAEDNKRAVGTEEARSYANEQNLLFYEVSAKTGLNVQQIFQSIGEKL 177
>gi|297812585|ref|XP_002874176.1| hypothetical protein ARALYDRAFT_326708 [Arabidopsis lyrata subsp.
lyrata]
gi|297320013|gb|EFH50435.1| hypothetical protein ARALYDRAFT_326708 [Arabidopsis lyrata subsp.
lyrata]
Length = 103
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/112 (82%), Positives = 97/112 (86%), Gaps = 11/112 (9%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK+INAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLA+NDAT
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAINDAT-- 58
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG 112
ERYHSLAPMYYRG AAAIIV+D+TNQASFERAKKWVQELQAQG
Sbjct: 59 ---------ERYHSLAPMYYRGVAAAIIVFDVTNQASFERAKKWVQELQAQG 101
>gi|121705630|ref|XP_001271078.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus clavatus NRRL 1]
gi|119399224|gb|EAW09652.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus clavatus NRRL 1]
Length = 262
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 122/210 (58%), Gaps = 39/210 (18%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A T + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q ++ T+KF
Sbjct: 7 ANTPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPTRTIKF 66
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQER+ SLAPMYYR A AA++VYD+T +S +AK WV ELQ Q +P +V+AL
Sbjct: 67 EIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPGIVIALV 126
Query: 122 GNKADLL---------------------------------------DARKVTAEEAQAYA 142
GNK DL DARKV+ EA AYA
Sbjct: 127 GNKLDLTNDGGEATEQPQAEVEQEPSGAEGEETAGDNHEEQETTPGDARKVSTREASAYA 186
Query: 143 QENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+E L F ETSAKT TNV ++F IA +P
Sbjct: 187 EEESLLFFETSAKTGTNVAEVFTAIANAIP 216
>gi|332225969|ref|XP_003262160.1| PREDICTED: uncharacterized protein LOC100594346 [Nomascus
leucogenys]
Length = 411
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 125/183 (68%), Gaps = 2/183 (1%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAP
Sbjct: 230 DTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAP 289
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++
Sbjct: 290 MYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKD 349
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGERTASA 196
A+ YA+ G +ETSAK A N+ ++F I++++P + P N SG + + +P + AS
Sbjct: 350 AKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKVGQPPMQ-ASR 408
Query: 197 SCC 199
CC
Sbjct: 409 RCC 411
>gi|402077303|gb|EJT72652.1| vacuolar protein sorting-associated protein 21 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 232
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 121/192 (63%), Gaps = 22/192 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 13 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T AS +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 73 FASLAPMYYRNAQAALVVYDLTKPASLVKAKHWVAELQRQASPGIVIALVGNKLDLTSDG 132
Query: 130 ------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
ARK++ EEA+ YA+E L F ETSAKT NV ++F IA +
Sbjct: 133 GDAVADADDGADDAAGGDARKISTEEAKGYAEEESLLFFETSAKTGVNVTEVFTAIANAI 192
Query: 172 PR--VQPAPNPS 181
P ++ A PS
Sbjct: 193 PETSLKSARGPS 204
>gi|449304761|gb|EMD00768.1| hypothetical protein BAUCODRAFT_182526 [Baudoinia compniacensis
UAMH 10762]
Length = 243
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 118/182 (64%), Gaps = 21/182 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV +F +E TIGAAF +Q + + T+KFEIWDTAGQER
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNEFQPNKEPTIGAAFLTQKCQLPNRTIKFEIWDTAGQER 76
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T +S +AK WV ELQ Q +P +V+A GNK DL D
Sbjct: 77 FASLAPMYYRNAQAALVVYDVTKASSITKAKHWVAELQRQASPGIVIAFVGNKVDLCDDD 136
Query: 130 -------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
RKV+ +EA+AYA+E L F ETSAKT NV+++F IA
Sbjct: 137 APEGEAAEGGEAEGEEDATVRKVSFKEAKAYAEEENLLFFETSAKTGHNVSEVFTAIANA 196
Query: 171 LP 172
+P
Sbjct: 197 IP 198
>gi|154275612|ref|XP_001538657.1| GTP-binding protein ypt5 [Ajellomyces capsulatus NAm1]
gi|150415097|gb|EDN10459.1| GTP-binding protein ypt5 [Ajellomyces capsulatus NAm1]
Length = 181
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 126/181 (69%), Gaps = 11/181 (6%)
Query: 30 FVKGQFIEFQESTIGAAFFSQTLAVND-ATVKFEIWDTAGQERYHSLAPMYYRGAAAAII 88
+ QF +++ESTIGAAF +QT+++++ TVKFEIWDTAGQERY SLAPMYYR A A++
Sbjct: 1 MIVDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVV 60
Query: 89 VYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL----DARKVTAEEAQAYAQE 144
VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+ D R + +A+AYA+E
Sbjct: 61 VYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTDSPDKRAIQTADAEAYARE 120
Query: 145 NGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP-----NPSGMVLMDRPGERTASASCC 199
GL F ETSAKT+TNV ++F IAK+LP Q P NP V + RP A+ C
Sbjct: 121 AGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLRSNPRPGVDL-RPEAAGPQANSC 179
Query: 200 S 200
S
Sbjct: 180 S 180
>gi|12852239|dbj|BAB29331.1| unnamed protein product [Mus musculus]
Length = 194
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT +F + WV+EL+ G +MV+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKAETFSTLENWVRELRQHGPHSMVVAIAGNKCDLTDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ--PAPNPSGMVLMDRP 189
+V +A+ YA F+ETSAK A N+N++F EI++R+P PA G L +P
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRRQP 186
Query: 190 GERTASASCC 199
E SCC
Sbjct: 187 SE--PKRSCC 194
>gi|334325908|ref|XP_001370672.2| PREDICTED: ras-related protein Rab-31-like [Monodelphis domestica]
Length = 221
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 2/185 (1%)
Query: 16 LGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSL 75
L D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSL
Sbjct: 38 LKDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSL 97
Query: 76 APMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTA 135
APMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V
Sbjct: 98 APMYYRGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPM 157
Query: 136 EEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGERTA 194
++A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + + +T
Sbjct: 158 KDAKEYAESIGAVVVETSAKCAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQPPQT- 216
Query: 195 SASCC 199
S CC
Sbjct: 217 SRRCC 221
>gi|45185604|ref|NP_983320.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|44981322|gb|AAS51144.1| ACL084Cp [Ashbya gossypii ATCC 10895]
gi|374106525|gb|AEY95434.1| FACL084Cp [Ashbya gossypii FDAG1]
Length = 207
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 129/184 (70%), Gaps = 8/184 (4%)
Query: 6 NKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N N+ + KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + ++ T+KFEIW
Sbjct: 2 NSNVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMDSKTIKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA++VYDIT SF +A+ WV+EL Q + +V+AL GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKGIVIALVGNK 121
Query: 125 ADLL---DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----QPA 177
DLL +ARKV+ EEA+ A+E GL F ETSAKT +N++F I +++P QPA
Sbjct: 122 LDLLENGEARKVSREEAEKLAEEEGLLFFETSAKTGDKINEVFLAIGEKIPLAKVGEQPA 181
Query: 178 PNPS 181
PS
Sbjct: 182 SGPS 185
>gi|363730697|ref|XP_428301.3| PREDICTED: ras-related protein Rab-31 [Gallus gallus]
Length = 226
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAP
Sbjct: 45 DTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAP 104
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++
Sbjct: 105 MYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPMKD 164
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP-SGMVLMDRPGERTASA 196
A+ YA+ G +ETSAK A N+ ++F I++++P + P N +G + + R +T
Sbjct: 165 AKEYAESIGAIVVETSAKNAVNIEELFQGISQQIPPLDPHENGNNGAIKLGRQTSQTGRR 224
Query: 197 SC 198
C
Sbjct: 225 CC 226
>gi|429850247|gb|ELA25539.1| rab GTPase vps21 [Colletotrichum gloeosporioides Nara gc5]
Length = 241
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 116/188 (61%), Gaps = 25/188 (13%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNGA 134
Query: 129 ----------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYE 166
DARKV+ EEA+ YA+E L F ETSAKT NV ++F
Sbjct: 135 GESAGSAGGDAGEDADGEDGSGDARKVSTEEAKTYAEEESLLFFETSAKTGHNVTEVFTA 194
Query: 167 IAKRLPRV 174
IA +P
Sbjct: 195 IANAIPET 202
>gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT SF+ KKWV+EL+ G ++V+A+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
+V +EA+ +A+ F+ETSA+ A N+ ++F +I+K++P P NP
Sbjct: 127 EVPTKEAKEFAESIAALFIETSARNAVNIEELFQKISKQIP---PLENP 172
>gi|281348435|gb|EFB24019.1| hypothetical protein PANDA_003579 [Ailuropoda melanoleuca]
Length = 185
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 123/188 (65%), Gaps = 6/188 (3%)
Query: 15 LLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHS 74
L D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +
Sbjct: 1 LFQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRA 60
Query: 75 LAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVT 134
LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+V
Sbjct: 61 LAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVM 120
Query: 135 AEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRPGE 191
+A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +P E
Sbjct: 121 ERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADTNP-PSGGKGFKLRRQPSE 179
Query: 192 RTASASCC 199
SCC
Sbjct: 180 --PQRSCC 185
>gi|50306401|ref|XP_453174.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642308|emb|CAH00270.1| KLLA0D02376p [Kluyveromyces lactis]
Length = 207
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 133/204 (65%), Gaps = 16/204 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV----NDATVKFEIWDTA 67
KLVLLGD GKSS+V RFVK F E++ESTIGAAF SQT+ + ++ +KFEIWDTA
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDSFDEYRESTIGAAFLSQTIKLSEEYDEQVLKFEIWDTA 64
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKAD 126
GQERY SLAPMYYR A AA++VYD+T S +AK WV EL+ + N + +++ L GNK D
Sbjct: 65 GQERYKSLAPMYYRNANAALVVYDVTEPDSLPKAKLWVDELKEKVNDDKLIICLVGNKLD 124
Query: 127 LLDARKVTA----EEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-----PRVQPA 177
L+ R+ T+ +A+ +AQEN L F + SAKT NV +F +I +RL ++Q +
Sbjct: 125 LVSERESTSLVDEADAREFAQENNLLFHQVSAKTGENVIKVFQDIGERLYLQNKDKIQES 184
Query: 178 PNP-SGMVLMDRPGERTASASCCS 200
P + + + RP S SCCS
Sbjct: 185 KKPNNNNISLQRPS-TNDSQSCCS 207
>gi|396081874|gb|AFN83488.1| Rab5-like GTPase [Encephalitozoon romaleae SJ-2008]
Length = 197
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 120/181 (66%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSSLVL++VKG+F +ESTIGA+F ++T+ + ++KFEIWDT
Sbjct: 9 KTYTFKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTIFTQEGSIKFEIWDT 68
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+I YDIT+ SFE AK+WV+EL + + L GNK+D
Sbjct: 69 AGQERYNSLIPMYYRGAQVALIAYDITSMESFETAKRWVEELSFEKPKEFIKVLIGNKSD 128
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L RKV ++ + YA L F E+SAKT N+ +IF IA+R+P+ + G L
Sbjct: 129 LESDRKVEYQKGKEYADSQNLLFFESSAKTGKNIAEIFNAIAERVPKEEAKKKTKGFRLK 188
Query: 187 D 187
D
Sbjct: 189 D 189
>gi|440912506|gb|ELR62068.1| Ras-related protein Rab-22A, partial [Bos grunniens mutus]
Length = 182
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 123/185 (66%), Gaps = 6/185 (3%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAP
Sbjct: 1 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAP 60
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+V +
Sbjct: 61 MYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERD 120
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRPGERTA 194
A+ YA F+ETSAK A N+N++F EI++R+P +P PS G L +P E
Sbjct: 121 AKDYADSIHAVFVETSAKNAININELFIEISRRIPSTDASP-PSGGKGFKLRRQPSE--P 177
Query: 195 SASCC 199
SCC
Sbjct: 178 KRSCC 182
>gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene family [Xenopus laevis]
gi|71682203|gb|AAI00187.1| Rab31 protein [Xenopus laevis]
Length = 193
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+ AAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V +EA+ YA F+ETSAK A N+N++F EI+KR+P A SG R
Sbjct: 127 EVLEKEAKDYADSINAVFVETSAKNAININELFIEISKRIPSAN-AGATSGKGFKLRRQS 185
Query: 192 RTASASCC 199
CC
Sbjct: 186 SEVERRCC 193
>gi|224054094|ref|XP_002191412.1| PREDICTED: ras-related protein Rab-17 [Taeniopygia guttata]
Length = 213
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 128/194 (65%), Gaps = 6/194 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG + GKSSL R+VK F E T+G +FF+Q L + +ATVKFEIWDTAGQE+
Sbjct: 21 KVVLLGSMSVGKSSLAYRYVKSDFRELL-PTVGCSFFTQILNLEEATVKFEIWDTAGQEK 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDA 130
Y S+ +YYR A AA++VYDI N+ +F RAK W++EL+ + P+ +V+AL GNK DL
Sbjct: 80 YQSVCHLYYRDAHAALLVYDIANKQTFSRAKLWLEELEKKFLPDEIVIALVGNKTDLAAE 139
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ----PAPNPSGMVLM 186
R+VT EE + +A+ GL FMETSAK+ VND+F I + L R + P+P G V +
Sbjct: 140 REVTTEEGEDFARTKGLLFMETSAKSNHQVNDLFMAIVQELLRREKEKASKPSPHGKVTV 199
Query: 187 DRPGERTASASCCS 200
D T++ C S
Sbjct: 200 DLRASSTSTGCCRS 213
>gi|326497657|dbj|BAK05918.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 107/136 (78%), Gaps = 9/136 (6%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN----D 56
MA T + I AKLVLLGD+GAGK+S+V+RF KG + E QESTIGAAFFS L V+ D
Sbjct: 2 MAPTPSSVIQAKLVLLGDLGAGKTSIVVRFAKGLYYECQESTIGAAFFSHALPVSGGGED 61
Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ----- 111
ATV+F+IWDT GQERYHSLAPMYYRGAAAA++VYDIT+ S+ RAK+WV ELQ Q
Sbjct: 62 ATVRFDIWDTTGQERYHSLAPMYYRGAAAAVVVYDITSTDSYTRAKRWVDELQRQVHIRT 121
Query: 112 GNPNMVMALAGNKADL 127
GNP++VMAL GNK DL
Sbjct: 122 GNPHLVMALVGNKVDL 137
>gi|432911409|ref|XP_004078665.1| PREDICTED: ras-related protein Rab-31-like [Oryzias latipes]
Length = 194
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT SF+ KKWV+EL+ G ++V+A+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
+V +EA+ +A+ F+ETSA+ A NV ++F +I+K++P P NP
Sbjct: 127 EVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQIP---PLENP 172
>gi|301772696|ref|XP_002921772.1| PREDICTED: ras-related protein Rab-31-like [Ailuropoda melanoleuca]
Length = 197
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 120/182 (65%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAP
Sbjct: 16 DTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAP 75
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++
Sbjct: 76 MYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKD 135
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASAS 197
A+ YA+ G +ETSAK A N+ ++F I++++P + P N + + AS
Sbjct: 136 AKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKQATQASRR 195
Query: 198 CC 199
CC
Sbjct: 196 CC 197
>gi|348557346|ref|XP_003464480.1| PREDICTED: ras-related protein Rab-31-like [Cavia porcellus]
Length = 201
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAP
Sbjct: 19 DTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAP 78
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++
Sbjct: 79 MYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKD 138
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASAS 197
A+ YA+ G +ETSAK A N+ ++F I++++P + P + V+ G+ + A
Sbjct: 139 AKDYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHEKGNNGVICMHGGKPPSQAH 198
Query: 198 -CC 199
CC
Sbjct: 199 RCC 201
>gi|410953504|ref|XP_003983410.1| PREDICTED: ras-related protein Rab-22A [Felis catus]
Length = 226
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 123/185 (66%), Gaps = 6/185 (3%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAP
Sbjct: 45 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAP 104
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+V +
Sbjct: 105 MYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPNIVVAIAGNKCDLIDVREVMERD 164
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRPGERTA 194
A+ YA F+ETSAK A N+N++F EI++R+P +P PS G L +P E
Sbjct: 165 AKDYADSIHAIFVETSAKNAININELFIEISRRIPSADASP-PSGGKGFKLRRQPSE--P 221
Query: 195 SASCC 199
SCC
Sbjct: 222 QRSCC 226
>gi|134116396|ref|XP_773152.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255773|gb|EAL18505.1| hypothetical protein CNBJ1470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 202
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 123/165 (74%), Gaps = 4/165 (2%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIW 64
++ + KLVLLG+ GKSSLVLRFV+ +F +F+ESTI AAF +Q++ ++++T +KFEIW
Sbjct: 2 SRTTSFKLVLLGESAVGKSSLVLRFVRNEFSDFRESTI-AAFLTQSVKLSESTSIKFEIW 60
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITN--QASFERAKKWVQELQAQGNPNMVMALAG 122
DTAGQERY SLAP+Y+R + AA+IVYDIT + SFE+AK WV+ELQ Q +P++V+ L G
Sbjct: 61 DTAGQERYKSLAPIYFRNSNAAVIVYDITQPPETSFEKAKSWVRELQRQADPSIVIMLVG 120
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 167
NK D+ RK + E + YA+E GL F E SAKT V ++F EI
Sbjct: 121 NKTDMESQRKTSREIGEQYAKEEGLLFAEASAKTGEGVEELFMEI 165
>gi|317737971|ref|NP_001188086.1| ras-related protein rab-22a [Ictalurus punctatus]
gi|308323839|gb|ADO29055.1| ras-related protein rab-22a [Ictalurus punctatus]
Length = 197
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 9 KVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + SF K WV+EL G N+V+A+AG+K D+ DAR
Sbjct: 69 FRALAPMYYRGSAAAIIVYDITKEESFLTLKNWVKELHQHGPSNIVVAIAGDKCDVSDAR 128
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRPG 190
+V ++A+ YA F+ETSAK A N+N+IF EI++++P ++ + G+ L
Sbjct: 129 EVLEKDAKDYADSIHAIFVETSAKNAININEIFTEISQKIPLLERSETGVRGLKLRREQS 188
Query: 191 ERTASASCC 199
+ T +CC
Sbjct: 189 DLTRERTCC 197
>gi|410923777|ref|XP_003975358.1| PREDICTED: ras-related protein Rab-31-like [Takifugu rubripes]
Length = 194
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT SF+ KKWV+EL+ G ++V+A+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
+V +EA+ +A+ F+ETSA+ A N+ ++F +I+K++P P NP
Sbjct: 127 EVPMKEAKEFAESIAAIFIETSARNAVNIEELFQKISKQIP---PLENP 172
>gi|358366102|dbj|GAA82723.1| RAB GTPase Ypt5 [Aspergillus kawachii IFO 4308]
Length = 199
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 122/167 (73%), Gaps = 7/167 (4%)
Query: 29 RFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAI 87
+F QF +++ESTIGAAF +QT++++++T VKFEIWDTAGQERY SLAPMYYR A A+
Sbjct: 17 QFKLDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAV 76
Query: 88 IVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL----DARKVTAEEAQAYAQ 143
+VYDIT +S ++AK WV+ELQ Q N N+V+ALAGNK DL+ D R + +A+AYA+
Sbjct: 77 VVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTESPDKRAIPTADAEAYAR 136
Query: 144 ENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPG 190
E GL F ETSAKT++NV ++F IAK+LP Q P + RPG
Sbjct: 137 EAGLLFFETSAKTSSNVKELFTAIAKKLPLDQAGPR--NLRTTPRPG 181
>gi|452988129|gb|EME87884.1| hypothetical protein MYCFIDRAFT_70380 [Pseudocercospora fijiensis
CIRAD86]
Length = 245
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 116/186 (62%), Gaps = 23/186 (12%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 18 KLVLLGEAAVGKSSLVLRFVNDDFQPNKEPTIGAAFLTQKCQLPTRTIKFEIWDTAGQER 77
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A +A++VYDIT +S +AK WV ELQ Q +P +V+AL GNK DL D
Sbjct: 78 FASLAPMYYRNAQSALVVYDITKPSSLTKAKHWVAELQRQASPGIVIALVGNKLDLCDDD 137
Query: 130 ---------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
RKVT +EA++YA E L F ETSAKT NV+++F IA
Sbjct: 138 NAATDAQDAEAENETEEDAGTVRKVTTKEAKSYADEENLLFFETSAKTGHNVSEVFTAIA 197
Query: 169 KRLPRV 174
+P
Sbjct: 198 NAIPET 203
>gi|440636052|gb|ELR05971.1| rab family, other [Geomyces destructans 20631-21]
Length = 236
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 116/181 (64%), Gaps = 20/181 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPSRTIKFEIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A +A++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL +
Sbjct: 76 FASLAPMYYRNAQSALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNEA 135
Query: 130 ------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
+RK++ EA++YA E GL F ETSAK TNV ++F IA +
Sbjct: 136 GEESRNDDGEEEDDNEGDSRKISTAEARSYADEEGLLFFETSAKLGTNVTEVFTAIANAI 195
Query: 172 P 172
P
Sbjct: 196 P 196
>gi|444315776|ref|XP_004178545.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
gi|387511585|emb|CCH59026.1| hypothetical protein TBLA_0B01820 [Tetrapisispora blattae CBS 6284]
Length = 212
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 124/171 (72%), Gaps = 4/171 (2%)
Query: 6 NKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N N+ + KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + + + T+KFEIW
Sbjct: 2 NSNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGNHTIKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA++VYD+T SF +A+ WV+ELQ Q N +++AL GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELQEQANKGIIIALVGNK 121
Query: 125 ADLL---DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
AD++ + RKV EEA+ A+E GL F ETSAKT NVN+ F I +++P
Sbjct: 122 ADIIEDGEERKVAREEAEKLAEEEGLLFFETSAKTGNNVNETFLAIGEKIP 172
>gi|125951222|ref|XP_697248.2| PREDICTED: ras-related protein Rab-31-like [Danio rerio]
Length = 194
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT SF+ KKWV+EL+ G ++V+A+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ--PAPNPSGMVLMDRP 189
+V +EA+ +A+ FMETSA+ A N+ ++F +I++++P ++ A + L +P
Sbjct: 127 EVPTKEAKEFAESIAAIFMETSARNAVNIEELFQKISRQIPPLENTDADSHDSFKLTRQP 186
Query: 190 GERTASASCC 199
A+ CC
Sbjct: 187 P--PATKRCC 194
>gi|348521996|ref|XP_003448512.1| PREDICTED: ras-related protein Rab-31-like [Oreochromis niloticus]
Length = 194
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 119/164 (72%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT SF+ KKWV+EL+ G ++V+A+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ 175
+V +EA+ +A+ F+ETSA+ A NV ++F +I+K++P ++
Sbjct: 127 EVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQIPPLE 170
>gi|385303401|gb|EIF47476.1| putative rab family gtp-binding protein [Dekkera bruxellensis
AWRI1499]
Length = 217
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 128/216 (59%), Gaps = 16/216 (7%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
M++ N I+ KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + D +K
Sbjct: 1 MSSQANNQISVKLVLLGEAAVGKSSLVLRFVSNDFEENKEPTIGAAFLTQRCIIGDKNIK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASF-ERAKKWVQELQAQGNPNMVMA 119
FEIWDTAGQER+ +L P+YYR A AA++VYD+T +SF + WV+EL Q + N+V+A
Sbjct: 61 FEIWDTAGQERFANLTPLYYRNAQAALVVYDVTKPSSFLSXQRHWVKELHEQASKNIVIA 120
Query: 120 LAGNKADLL----------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
L GNK DL+ ARKV+ +E + A+E L F ETSAKT NVN +F I +
Sbjct: 121 LVGNKFDLILDPESGEEIEGARKVSIDEGKXLAEEENLLFFETSAKTGLNVNKVFTTIGE 180
Query: 170 RLPRVQPA-----PNPSGMVLMDRPGERTASASCCS 200
++P S + + P + S CS
Sbjct: 181 KIPDTXKQXXNXDEGNSNRIDLSAPAQNDIHNSACS 216
>gi|406860585|gb|EKD13643.1| Rab5-like protein ypt51 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 241
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 119/197 (60%), Gaps = 24/197 (12%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
AT + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KF
Sbjct: 4 ATAPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKF 63
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQER+ SLAPMYYR A +A++VYD+T S +AK WV ELQ Q +P +V+AL
Sbjct: 64 EIWDTAGQERFASLAPMYYRNAQSALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALV 123
Query: 122 GNKADLL------------------------DARKVTAEEAQAYAQENGLFFMETSAKTA 157
GNK DL DAR V EA++YA+E GL F ETSAK
Sbjct: 124 GNKLDLTTETSSTGNNLSEDGEGADGEDADGDARMVPTAEAKSYAEEEGLLFFETSAKLG 183
Query: 158 TNVNDIFYEIAKRLPRV 174
TNV ++F IA +P
Sbjct: 184 TNVTEVFTAIANAIPET 200
>gi|367004961|ref|XP_003687213.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
gi|357525516|emb|CCE64779.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
Length = 208
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 130/205 (63%), Gaps = 18/205 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLGD GKSS+V RFVK F EF+ESTIGAAF SQT+ + N+ +KFEIWDTAGQ
Sbjct: 5 KLVLLGDSSVGKSSIVYRFVKDSFDEFRESTIGAAFLSQTITLEENNQVIKFEIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADLL 128
ERY SLAPMYYR A AA++VYD+T S +AK W++EL+ + GN +V+ L GNK D+
Sbjct: 65 ERYKSLAPMYYRNANAALVVYDVTAPDSLMKAKSWIEELKKKVGNEELVICLVGNKVDIC 124
Query: 129 D----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA------- 177
+ RK+ EEA+ +A + L F E SAKT NV ++F +I ++L + A
Sbjct: 125 EEDDTKRKIEFEEAKDWANDENLLFYEVSAKTGYNVKEVFQKIGEQLYEYKKAEQANKGT 184
Query: 178 ---PNPSGMVLMDRPGERTASASCC 199
N + + + P + + SCC
Sbjct: 185 QDNSNITSNIRLQEP-QASNPTSCC 208
>gi|342321384|gb|EGU13318.1| GTP-binding protein ypt5 [Rhodotorula glutinis ATCC 204091]
Length = 1433
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 125/215 (58%), Gaps = 51/215 (23%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ KLVLLG+ GKSS+VLRF + F +E TIGAAF +Q + D +KFEIWDTAG
Sbjct: 16 VQVKLVLLGESAVGKSSVVLRFCQNDFQPNKEPTIGAAFLTQRCRLEDKVIKFEIWDTAG 75
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QER+ SL+PMYYR A AA++VYD+T AS E+AK WV+ELQ Q NPN+V+ALAGNK DL+
Sbjct: 76 QERFRSLSPMYYRNAQAAVVVYDVTKSASLEQAKTWVKELQRQANPNIVIALAGNKVDLV 135
Query: 129 ------------------------DA---------------------------RKVTAEE 137
DA R+V+ EE
Sbjct: 136 RPSSDGDDSASDAAVNPEDSEEADDATATPEDEAGSAAGDDEGPDGGKPSESRRQVSREE 195
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
A+ YA+E GL F ETSAKT V ++F EIAK++P
Sbjct: 196 AEEYAKECGLLFFETSAKTGEGVVEVFTEIAKKIP 230
>gi|340382595|ref|XP_003389804.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 195
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 116/162 (71%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
KL LLG+ G GK+ +V RFV F + + T+GAAF ++T+ VND ++ F+IWDTAGQE
Sbjct: 6 VKLCLLGESGVGKTCIVNRFVSDVFSDKEPLTVGAAFSTKTIQVNDHSILFQIWDTAGQE 65
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
+Y LAPMYYRG+AAA++VYDITN SF + W+QEL+ G PN+V+A+AGNK D+ ++
Sbjct: 66 KYRGLAPMYYRGSAAAVVVYDITNLKSFIEMQSWIQELRQLGPPNLVLAIAGNKLDISES 125
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
R+VTA + + YA+ FME SAK TNV D+F IA +P
Sbjct: 126 RQVTASKGEEYAKSVNAIFMECSAKDDTNVKDLFSRIADTIP 167
>gi|19173399|ref|NP_597202.1| RAS-RELATED PROTEIN RAB5 [Encephalitozoon cuniculi GB-M1]
gi|449328868|gb|AGE95144.1| ras-related protein rab5 [Encephalitozoon cuniculi]
Length = 197
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 121/181 (66%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSSLVL++VKG+F +ESTIGA+F ++T+ + +KFEIWDT
Sbjct: 9 KTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTQERGIKFEIWDT 68
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+IVYDIT+ SFE AK+WV+EL + + L GNK+D
Sbjct: 69 AGQERYNSLIPMYYRGAQVALIVYDITSVESFETAKRWVEELGFEKPREFIKVLVGNKSD 128
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L RKV ++ + YA GL F E+SAKT N+ +IF IA+R+P+ + G L
Sbjct: 129 LDSDRKVDYQQGKDYADSQGLLFFESSAKTGKNIAEIFSAIAERVPKEETKKKTKGFRLR 188
Query: 187 D 187
D
Sbjct: 189 D 189
>gi|335775420|gb|AEH58566.1| Ras-related protein Rab-5A-like protein [Equus caballus]
Length = 146
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/147 (62%), Positives = 110/147 (74%), Gaps = 8/147 (5%)
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
KFEIWDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+A
Sbjct: 1 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIA 60
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
L+GNKADL + R V +EAQ+YA +N L FMETSAKT+ NVN+IF IAK+LP+ +P N
Sbjct: 61 LSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ-N 119
Query: 180 PSGM------VLMDRPGERTASASCCS 200
P V + P + T S CCS
Sbjct: 120 PGANSARGRGVDLTEPTQPTRS-QCCS 145
>gi|392512809|emb|CAD26378.2| RAS-RELATED PROTEIN RAB5 [Encephalitozoon cuniculi GB-M1]
Length = 190
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 121/181 (66%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSSLVL++VKG+F +ESTIGA+F ++T+ + +KFEIWDT
Sbjct: 2 KTYTFKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTQERGIKFEIWDT 61
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+IVYDIT+ SFE AK+WV+EL + + L GNK+D
Sbjct: 62 AGQERYNSLIPMYYRGAQVALIVYDITSVESFETAKRWVEELGFEKPREFIKVLVGNKSD 121
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L RKV ++ + YA GL F E+SAKT N+ +IF IA+R+P+ + G L
Sbjct: 122 LDSDRKVDYQQGKDYADSQGLLFFESSAKTGKNIAEIFSAIAERVPKEETKKKTKGFRLR 181
Query: 187 D 187
D
Sbjct: 182 D 182
>gi|255080986|ref|XP_002504059.1| predicted protein [Micromonas sp. RCC299]
gi|226519326|gb|ACO65317.1| predicted protein [Micromonas sp. RCC299]
Length = 222
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 124/173 (71%), Gaps = 6/173 (3%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN----DATVKFE 62
+ KLVLLGD G GKS++V+RFV+G+F E + T+GAAF +++L + DA VKFE
Sbjct: 50 RETRVKLVLLGDTGVGKSAIVVRFVQGEFSEESKVTVGAAFLAKSLRIPEHGPDAAVKFE 109
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQERY SLAP+YYRGA AA++VYDIT+ ASFE+A+ WV+ELQ +PN+ + L G
Sbjct: 110 IWDTAGQERYASLAPLYYRGAGAAVVVYDITSPASFEKARFWVKELQKHASPNINIVLVG 169
Query: 123 NKADLLDARK-VTAEEAQAYAQENGLFF-METSAKTATNVNDIFYEIAKRLPR 173
NK DL D R+ V+ E+A+A+A ENG+ E SA + V +IF +A L R
Sbjct: 170 NKKDLGDTRRAVSREDARAFANENGMAMECEASALSGEGVVEIFKSVAMSLWR 222
>gi|68481999|ref|XP_715017.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436619|gb|EAK95978.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238878219|gb|EEQ41857.1| GTP-binding protein ypt5 [Candida albicans WO-1]
Length = 221
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 134/209 (64%), Gaps = 22/209 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +QT+ + ++ T+KFEIWDTAGQ
Sbjct: 14 KLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTITIPESETTIKFEIWDTAGQ 73
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDIT+++SF++A+ W++EL+ Q +V+AL GNK+DL D
Sbjct: 74 ERYKSLAPMYYRNANAALCVYDITSRSSFQKAQDWIKELKKQAPEGIVIALVGNKSDLDD 133
Query: 130 ARKVTAEEAQAYAQEN-----GLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--- 181
R+V + E Q Y QE + E SAK+ V D+F +I + LP V + S
Sbjct: 134 EREVESSEVQEYVQEQNSDGCSIITAECSAKSGDGVLDVFNKIGRALP-VDEVIDASRSR 192
Query: 182 ----------GMVLMDRP-GERTASASCC 199
G V ++RP G+ S SCC
Sbjct: 193 QGAGAGGRRPGGVDLNRPRGQVNQSNSCC 221
>gi|432103526|gb|ELK30630.1| Ras-related protein Rab-31 [Myotis davidii]
Length = 665
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 90/168 (53%), Positives = 119/168 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+V ++A+ YA+ G +ETSAK A N+ ++F I++++P + P N
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPQEN 175
>gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268938|emb|CAJ82023.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 193
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+ AAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSTAAIIVYDITKEETFLTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGE 191
+V ++A+ YA F+ETSAK A N+N++F EI+KR+P A SG R
Sbjct: 127 EVLEKDAKDYADSINAVFVETSAKNAININELFIEISKRIPSAN-AGATSGKGFKLRRQS 185
Query: 192 RTASASCC 199
CC
Sbjct: 186 SEVERRCC 193
>gi|115396284|ref|XP_001213781.1| vacuolar protein sorting-associated protein 21 [Aspergillus terreus
NIH2624]
gi|114193350|gb|EAU35050.1| vacuolar protein sorting-associated protein 21 [Aspergillus terreus
NIH2624]
Length = 263
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 120/211 (56%), Gaps = 40/211 (18%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A T + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q ++ T+KF
Sbjct: 7 ANTPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPTRTIKF 66
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
EIWDTAGQER+ SLAPMYYR A AA++VYD+T +S +AK WV ELQ Q +P +V+AL
Sbjct: 67 EIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPGIVIALV 126
Query: 122 GNKADLL----------------------------------------DARKVTAEEAQAY 141
GNK DL DARKV+ EA Y
Sbjct: 127 GNKLDLTNDGNGAAAESPAEDEQESGAAEGEDEAAGENADEADATPGDARKVSTREASTY 186
Query: 142 AQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
A+E L F ETSAKT NV D+F IA +P
Sbjct: 187 AEEESLLFFETSAKTGVNVVDVFTAIANAIP 217
>gi|452847434|gb|EME49366.1| hypothetical protein DOTSEDRAFT_19823 [Dothistroma septosporum
NZE10]
Length = 242
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 116/184 (63%), Gaps = 21/184 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQPNKEPTIGAAFLTQKCQLPSRTIKFEIWDTAGQER 76
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A +A++VYDIT +S +AK WV ELQ Q +P +V+AL GNK DL +
Sbjct: 77 FASLAPMYYRNAQSALVVYDITKASSLVKAKHWVAELQRQASPGIVIALVGNKLDLCEDD 136
Query: 130 -------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
RKV+ +EA+AYA E L F ETSAKT NV+++F IA
Sbjct: 137 NADGEQAEGESEAEEDASTTRKVSIKEAKAYADEENLLFFETSAKTGHNVSEVFTAIANA 196
Query: 171 LPRV 174
+P
Sbjct: 197 IPET 200
>gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase
Length = 169
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 115/161 (71%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+V +A+ YA F+ETSAK A N+N++F EI++R+P
Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167
>gi|327281988|ref|XP_003225727.1| PREDICTED: ras-related protein Rab-31-like [Anolis carolinensis]
Length = 196
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 125/185 (67%), Gaps = 6/185 (3%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+HSLAP
Sbjct: 15 DTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAP 74
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R+V ++
Sbjct: 75 MYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPTKD 134
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRPGERTASA 196
A+ YA+ G +ETSAK A N+ ++F I++++P ++ N SG + + G++T
Sbjct: 135 AKEYAETIGAIVVETSAKNAINIEELFQGISRQIPPLETHENGNSGTIKL---GKQTTQM 191
Query: 197 S--CC 199
+ CC
Sbjct: 192 TRRCC 196
>gi|323455357|gb|EGB11225.1| hypothetical protein AURANDRAFT_59866 [Aureococcus anophagefferens]
Length = 198
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 121/172 (70%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
M + K+VLLGD G GKSSL R+V F + ESTIGA+F S+ + V+ A K
Sbjct: 1 MPAQPTRTRECKVVLLGDTGVGKSSLAQRYVTNTFKPYSESTIGASFMSKMILVDGAPCK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
+IWDTAGQE+YHSLAPMYYRGAAAAI+V+DIT AS ++ K WV+ELQ QG + +A+
Sbjct: 61 CQIWDTAGQEKYHSLAPMYYRGAAAAILVFDITKPASLDKLKAWVRELQTQGPERLALAI 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
AGNKADL D R V A++A+A+A + G + ETSAK TNV+ +F ++ +R P
Sbjct: 121 AGNKADLADRRAVPADDAKAFAADIGALYCETSAKDDTNVSQLFADLVRRAP 172
>gi|405974092|gb|EKC38762.1| Ras-related protein Rab-31 [Crassostrea gigas]
Length = 224
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 115/158 (72%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLG+ G GKSS+VLRFV F ESTIGA+F ++ L V D + +F+IWDTAGQE+
Sbjct: 7 KVCLLGESGVGKSSIVLRFVSDSFKGALESTIGASFMTKRLEVGDVSYQFQIWDTAGQEK 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYRGA+AAIIVYDIT +A++ K WV+EL+ +MV+A+AGNK+DL D R
Sbjct: 67 YRSLAPMYYRGASAAIIVYDITREATYRTVKDWVRELKRNCTADMVIAIAGNKSDLNDLR 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
+V A +A+ YAQ G F+ETSA +A NV +F I K
Sbjct: 127 EVRARDAEEYAQSIGALFIETSALSAVNVPHLFTAIGK 164
>gi|241950447|ref|XP_002417946.1| RAB family GTPase, putative [Candida dubliniensis CD36]
gi|223641284|emb|CAX45664.1| RAB family GTPase, putative [Candida dubliniensis CD36]
Length = 221
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 121/168 (72%), Gaps = 7/168 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +QT+ + ++ T+KFEIWDTAGQ
Sbjct: 14 KLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTITIPESETTIKFEIWDTAGQ 73
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDIT+++SF++A+ W++EL+ Q +V+AL GNK+DL D
Sbjct: 74 ERYKSLAPMYYRNANAALCVYDITSRSSFQKAQDWIKELKRQAPEGIVIALVGNKSDLDD 133
Query: 130 ARKVTAEEAQAYAQE-NG----LFFMETSAKTATNVNDIFYEIAKRLP 172
R+V + E Q Y QE NG + E SAK+ V D+F +I + LP
Sbjct: 134 EREVESSEVQEYVQEQNGDCCSIITAECSAKSGDGVLDVFNKIGRALP 181
>gi|291414854|ref|XP_002723671.1| PREDICTED: RAS-related protein RAB-22A, partial [Oryctolagus
cuniculus]
Length = 182
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 122/185 (65%), Gaps = 6/185 (3%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAP
Sbjct: 1 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAP 60
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R+V +
Sbjct: 61 MYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERD 120
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR---VQPAPNPSGMVLMDRPGERTA 194
A+ YA F+ETSAK A N+N++F EI++R+P QP+ G L +P E
Sbjct: 121 AKDYADSIHAIFVETSAKNAININELFIEISRRIPSGDTSQPS-GSKGFKLRRQPSE--P 177
Query: 195 SASCC 199
SCC
Sbjct: 178 RRSCC 182
>gi|156841129|ref|XP_001643940.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114570|gb|EDO16082.1| hypothetical protein Kpol_1016p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 124/207 (59%), Gaps = 18/207 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN--DATVKFEIWDTAGQ 69
KLVLLGD GKSS+V RFVK F EF+ESTIGAAF SQ++ ++ D +KFEIWDTAGQ
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQSIKLDEDDTVIKFEIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADLL 128
ERY SLAPMYYR A AA++VYDIT S +A+ WV+EL+ + + +V+ L GNK DL
Sbjct: 65 ERYKSLAPMYYRNANAALVVYDITASDSLSKAQSWVEELKNKVADDKLVICLVGNKLDLC 124
Query: 129 D----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL----------PRV 174
R V +A+ YA E GL F E SAKT VND+F I + L
Sbjct: 125 QEDSGKRSVEISDAKQYADEQGLLFFEVSAKTGEKVNDVFKSIGESLYSYKKEELLSKSE 184
Query: 175 QPAPNPSGMVLMDRPGERTAS-ASCCS 200
Q N G V + T+ SCC+
Sbjct: 185 QNGTNTHGQVDLQLQKPATSDPTSCCT 211
>gi|429963305|gb|ELA42849.1| small GTP-binding protein domain protein [Vittaforma corneae ATCC
50505]
Length = 189
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 115/167 (68%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSS+VL FVKG+F +ESTIGA+F ++T+ N VK+EIWDT
Sbjct: 2 KTFTYKMVVLGHYSVGKSSIVLNFVKGEFNPREESTIGASFLTKTIFQNRCAVKYEIWDT 61
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+IVYDIT+Q SFE AK+WV+EL+ + L NK D
Sbjct: 62 AGQERYYSLIPMYYRGAQVALIVYDITSQESFESAKRWVEELKYDKPQEFLKVLVANKMD 121
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
L ++ + E +AYA+ GL F ETSAKT N+ +F +IA+ LP+
Sbjct: 122 LRESAMLDPEVGRAYAENEGLMFYETSAKTGHNIQKMFSDIAEALPK 168
>gi|444317893|ref|XP_004179604.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
gi|387512645|emb|CCH60085.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
Length = 220
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 116/166 (69%), Gaps = 6/166 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATV-KFEIWDTAGQE 70
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQT+ + + TV KFEIWDTAGQE
Sbjct: 5 KLVLLGDSSVGKSSIVNRFVKDSFDELRESTIGAAFLSQTITLKNKTVIKFEIWDTAGQE 64
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADLLD 129
RY SLAPMYYR A AA++VYDIT S +A+ WV EL+++ G+ N+V+ L GNK DL D
Sbjct: 65 RYKSLAPMYYRNANAALVVYDITENDSLMKAQSWVDELKSKVGDENLVICLVGNKIDLCD 124
Query: 130 ----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
R V ++A+ YA E L F E SAK+ NV ++F I ++L
Sbjct: 125 EDESKRVVLTKDAKDYADEQNLMFYEVSAKSGENVKEVFQVIGEKL 170
>gi|254580657|ref|XP_002496314.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
gi|238939205|emb|CAR27381.1| ZYRO0C15554p [Zygosaccharomyces rouxii]
Length = 211
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 127/182 (69%), Gaps = 6/182 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + + + TVKFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIGEQTVKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYDIT SF +A+ WV+EL Q + +V+AL GNK D+++
Sbjct: 69 FASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKGIVIALVGNKLDMIENG 128
Query: 130 -ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP---APNPSGMVL 185
RKV EEA+ A+E GL F ETSAK+ NVN++F I +++P +P A SG+ +
Sbjct: 129 GERKVAKEEAEKLAEEEGLLFFETSAKSGENVNEVFLGIGEKIPIKKPGEQANEQSGLRI 188
Query: 186 MD 187
D
Sbjct: 189 TD 190
>gi|255726788|ref|XP_002548320.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
gi|240134244|gb|EER33799.1| vacuolar protein sorting-associated protein 21 [Candida tropicalis
MYA-3404]
Length = 205
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 126/194 (64%), Gaps = 5/194 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV +F E +E TIGAAF +Q V D T+K+EIWDTAGQER
Sbjct: 12 KLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCTVGDRTIKYEIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SLAPMYYR A AA++VYDIT +SF RA+ W++EL+ Q +V+AL GNK DL D R
Sbjct: 72 FASLAPMYYRNAQAAVVVYDITKPSSFIRARHWIKELKDQSPEGIVIALVGNKLDLEDER 131
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP---RVQPAPNPSGMVLMDR 188
KV A E + A GL F +TSAKT V ++F I K + Q N +G+ +D
Sbjct: 132 KVEASEVEEEANSQGLMFFQTSAKTGEGVLEVFEGIGKNIKIGDTSQATSNNNGINRIDL 191
Query: 189 PGERTASAS--CCS 200
E A+ + CCS
Sbjct: 192 NAEAPANTNTGCCS 205
>gi|401827320|ref|XP_003887752.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998759|gb|AFM98771.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
Length = 197
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 121/181 (66%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSSLVL++VKG+F +ESTIGA+F ++T+ + ++KFEIWDT
Sbjct: 9 KTYTFKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTQEGSIKFEIWDT 68
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+IVYDIT+ SFE AK+WV+EL + + L GNK+D
Sbjct: 69 AGQERYNSLIPMYYRGAQVALIVYDITSAESFETAKRWVEELGFEKPKEFIKVLIGNKSD 128
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM 186
L R+V ++ + YA + L F E+SAKT + +IF IA+R+P+ + G L
Sbjct: 129 LESDRRVEYQQGKEYADSHNLLFFESSAKTGKGIAEIFNAIAERVPKEEVKKKVRGFRLK 188
Query: 187 D 187
D
Sbjct: 189 D 189
>gi|320580341|gb|EFW94564.1| GTPase [Ogataea parapolymorpha DL-1]
Length = 849
Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 89/158 (56%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
Query: 16 LGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN-DATVKFEIWDTAGQERYHS 74
LG+ GKSS+V RFVK F + +ESTIGAAF +QT+ ++ + TVKFEIWDTAGQERY S
Sbjct: 661 LGESAVGKSSIVHRFVKDSFTDSRESTIGAAFLTQTIQIDANTTVKFEIWDTAGQERYRS 720
Query: 75 LAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVT 134
LA MYYR A AA++V+DIT ++S ++AK W++ELQ Q + +V+AL GNK DL + RK++
Sbjct: 721 LASMYYRNAQAALVVFDITQESSLDKAKYWIKELQKQASSGIVIALVGNKLDLEEERKIS 780
Query: 135 AEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+EAQA+A E GL + E SAKT V D F +IA +LP
Sbjct: 781 KDEAQAFANELGLMYAEVSAKTGEKVKDCFKDIALKLP 818
>gi|344237137|gb|EGV93240.1| Ras-related protein Rab-22A [Cricetulus griseus]
Length = 254
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 122/187 (65%), Gaps = 6/187 (3%)
Query: 16 LGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSL 75
+ D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +L
Sbjct: 71 IKDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRAL 130
Query: 76 APMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTA 135
APMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R+V
Sbjct: 131 APMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVME 190
Query: 136 EEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRPGER 192
+A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +P E
Sbjct: 191 RDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQPSE- 248
Query: 193 TASASCC 199
SCC
Sbjct: 249 -PKRSCC 254
>gi|363754611|ref|XP_003647521.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891158|gb|AET40704.1| hypothetical protein Ecym_6328 [Eremothecium cymbalariae
DBVPG#7215]
Length = 205
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 133/202 (65%), Gaps = 16/202 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV---NDATVKFEIWDTAG 68
KLVLLGD GKSS+V RFVK F EF+ESTIGAAF S+T+ + +D +KFEIWDTAG
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSRTIKLAEYDDTMIKFEIWDTAG 64
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADL 127
QERY SLAPMYYR A AA++VYD+T + S +A+ WV EL+++ G+ ++V+ L GNK DL
Sbjct: 65 QERYKSLAPMYYRNANAALVVYDVTQEDSLAKAQSWVNELKSKVGDDDLVICLVGNKVDL 124
Query: 128 LD----ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL------PRVQPA 177
+ ++ + ++A+ YA+++GL F E SAK+ V ++F I +RL +
Sbjct: 125 AEEDSKSKVIDEDDAKDYAEQHGLIFHEVSAKSGRGVIEVFQNIGERLYLQRKDSLAAQS 184
Query: 178 PNPSGMVLMDRPGERTASASCC 199
PS + L RP A+ SCC
Sbjct: 185 QQPSNIQLQ-RPTTNDAT-SCC 204
>gi|326922383|ref|XP_003207428.1| PREDICTED: ras-related protein Rab-17-like, partial [Meleagris
gallopavo]
Length = 212
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 120/165 (72%), Gaps = 6/165 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQES--TIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
K+VLLG GKSSL R+VK +F+ES T+G +FF+QT+ + AT+K EIWDTAGQ
Sbjct: 49 KMVLLGSTSVGKSSLAYRYVKN---DFKESLPTVGCSFFTQTIQLETATIKLEIWDTAGQ 105
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLL 128
E+YHS+ +YYRGA AA++VYD+TN+ +F RAK+W+ EL+ + P+ +V+AL GNK DL
Sbjct: 106 EKYHSVCHLYYRGAHAALLVYDLTNKETFNRAKQWLMELEKEFLPDEIVIALVGNKTDLA 165
Query: 129 DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
D R+V AE+ + +A+ L FMETSAK+ VNDIF +A+ L R
Sbjct: 166 DEREVAAEDGEEFARSRSLLFMETSAKSNHQVNDIFMAVARELLR 210
>gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 172
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 114/159 (71%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
+V ++A+ YA+ G +ETSAK A N+ ++F I+++
Sbjct: 128 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISEQ 166
>gi|366990901|ref|XP_003675218.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
gi|342301082|emb|CCC68847.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
Length = 216
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 116/171 (67%), Gaps = 11/171 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN------DATVKFEIWD 65
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQT+ + D +KFEIWD
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGAAFLSQTIKIKAEEQEEDVVIKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNK 124
TAGQERY SLAPMYYR A AA++VYD+T + S +A+ WV+EL+ + G+ ++V+ L GNK
Sbjct: 65 TAGQERYKSLAPMYYRNANAALVVYDLTQKDSLVKARSWVEELKNKVGDEDLVIFLVGNK 124
Query: 125 ADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
DL D R V EA+AYA+E L F E SAKT V ++F I ++L
Sbjct: 125 LDLCEGEEDLRAVDTSEAKAYAEEQNLLFTEVSAKTGQGVKEVFRSIGEKL 175
>gi|321265069|ref|XP_003197251.1| GTPase [Cryptococcus gattii WM276]
gi|317463730|gb|ADV25464.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 253
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 132/246 (53%), Gaps = 53/246 (21%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K + KLVLLG+ GKSSLVLRF G F E TIGAAF +Q + + VKFEIWDT
Sbjct: 8 KAVQVKLVLLGEAAVGKSSLVLRFTSGDFDENTSPTIGAAFLTQKCRLENRIVKFEIWDT 67
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A AA++VYDIT AS E+AK WV+ELQ Q N N+V+AL GNK D
Sbjct: 68 AGQERFHSLAPMYYRNAQAAVVVYDITKAASLEKAKAWVKELQRQANANIVIALVGNKLD 127
Query: 127 LL----------------------------------------DARKVTAEEAQAYAQENG 146
L+ D R+V EA+AYA+E G
Sbjct: 128 LVSATPSTSVSSSSETPAEGEAEADAEAEDEEPSPAAAADDEDVRQVPTAEAEAYAKEAG 187
Query: 147 LFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDR-------------PGERT 193
L F E SAK TNVN++F EIAK +P P+G +R G++
Sbjct: 188 LLFFEASAKAGTNVNELFTEIAKTIPFDTITAKPAGGAQQNRRDAAQDGNRVNLGEGQQA 247
Query: 194 ASASCC 199
CC
Sbjct: 248 KRGGCC 253
>gi|50291301|ref|XP_448083.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527394|emb|CAG61034.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 124/171 (72%), Gaps = 4/171 (2%)
Query: 6 NKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
N NI + KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ TVKFEIW
Sbjct: 2 NNNITSLKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVTINEHTVKFEIW 61
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SLAPMYYR A AA++VYD+T SF +A+ WV+ELQ Q + ++++AL GNK
Sbjct: 62 DTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELQEQASKDIIIALVGNK 121
Query: 125 ADLLD---ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
D+L+ R V+ EEA+ A+E L F ETSAK+ N+ D+F I +++P
Sbjct: 122 IDVLENGTERSVSREEAEKLAEEENLLFFETSAKSGENITDVFLAIGEKVP 172
>gi|116182662|ref|XP_001221180.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186256|gb|EAQ93724.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 201
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 120/185 (64%), Gaps = 27/185 (14%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFVK I E+T TVKFEIWDTAGQER
Sbjct: 20 KLVLLGESAVGKSSIVLRFVKT--ISLDENT---------------TVKFEIWDTAGQER 62
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
Y SLAPMYYR A A++VYDIT S ++AK WV+ELQ Q N N+++ALAGNK DL+
Sbjct: 63 YKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLDLVTEQ 122
Query: 129 -DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD 187
D R + +A+AYA+E GL F ETSAKTA NV ++F IAK+LP Q P +
Sbjct: 123 PDKRAIETADAEAYAKEAGLLFFETSAKTAENVQELFTAIAKKLPLDQVGPRHA------ 176
Query: 188 RPGER 192
RPG+R
Sbjct: 177 RPGQR 181
>gi|354468755|ref|XP_003496817.1| PREDICTED: ras-related protein Rab-22A-like [Cricetulus griseus]
Length = 191
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 121/185 (65%), Gaps = 6/185 (3%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAP
Sbjct: 10 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAP 69
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R+V +
Sbjct: 70 MYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERD 129
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS---GMVLMDRPGERTA 194
A+ YA F+ETSAK A N+N++F EI++R+P P PS G L +P E
Sbjct: 130 AKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANP-PSGGKGFKLRRQPSE--P 186
Query: 195 SASCC 199
SCC
Sbjct: 187 KRSCC 191
>gi|401841965|gb|EJT44266.1| YPT52-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 234
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 131/231 (56%), Gaps = 43/231 (18%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN--------DATVKFEI 63
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQ++ ++ D +KFEI
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNGAKDVVIKFEI 64
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAG 122
WDTAGQERY SLAPMYYR A AA++VYDIT + S ++A+ WV EL+ + G+ ++V+ L G
Sbjct: 65 WDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLG 124
Query: 123 NKADLLD--------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVND 162
NK DL R ++ EEA+ YAQE GL F E SAKT + +
Sbjct: 125 NKVDLCQDMPGSETIPELNEGEDDEQKVRAISTEEAKQYAQEQGLLFREVSAKTGDGIKE 184
Query: 163 IFYEIAKRL-------------PRVQPAPNPSGMVLMDRPGERTASASCCS 200
IF EI ++L ++ N + + RP + SCCS
Sbjct: 185 IFQEIGEKLYDSKKDEILSKQNRQINGGNNGQVDIHLQRPSTNDPT-SCCS 234
>gi|118093304|ref|XP_421874.2| PREDICTED: ras-related protein Rab-17 [Gallus gallus]
Length = 213
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 6/192 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG GKSSL R+VK F E T+G +FF+QT+ + AT+K EIWDTAGQE+
Sbjct: 21 KMVLLGSTSVGKSSLAYRYVKNDFKE-SLPTVGCSFFTQTIQLETATIKLEIWDTAGQEK 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDA 130
YHS+ +YYRGA AA++VYD+TN+ + RAK+W+ EL+ + P+ +V+AL GNK DL D
Sbjct: 80 YHSVCHLYYRGAHAALLVYDLTNKETLNRAKQWLMELEKEFLPDEIVIALVGNKTDLADE 139
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ----PAPNPSGMVLM 186
R+V AE+ + +A+ L FMETSAK+ VND+F +A+ L R + P+ +
Sbjct: 140 REVAAEDGEEFARSRSLLFMETSAKSNHQVNDVFMAVAQELLRREGKKAAVPSTGDRQRL 199
Query: 187 DRPGERTASASC 198
D RT C
Sbjct: 200 DLQASRTRRGCC 211
>gi|294939398|ref|XP_002782450.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239894056|gb|EER14245.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 210
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 133/206 (64%), Gaps = 8/206 (3%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDAT 58
+ T+ ++ KLVLLGD GK+SLV RFV F + ++TIGAAF +Q L V ++ +
Sbjct: 3 IITSPSRKQGYKLVLLGDASVGKTSLVQRFVHNSFEDTVQTTIGAAFSTQDLLVPGSNRS 62
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
+KFEIWDTAGQER+ SLAPMYYR A+ AI+VYD T+ ASF RA+ WV++L NP++V+
Sbjct: 63 IKFEIWDTAGQERFRSLAPMYYRNASCAIVVYDQTSMASFVRAQDWVKQLSMVNNPDIVV 122
Query: 119 ALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP----RV 174
ALA NK D+ D R+V A+ YA +GL F ETSAKT NV +F IA++LP V
Sbjct: 123 ALAANKMDVAD-REVPLATAREYAMTHGLVFCETSAKTGQNVVALFEAIAQKLPLRSNPV 181
Query: 175 QPAPNPSGMVLMDRPGE-RTASASCC 199
P P + + + P T + CC
Sbjct: 182 GPTTTPITLGMGNTPTHAATTTRGCC 207
>gi|242784469|ref|XP_002480393.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|242784474|ref|XP_002480394.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|218720540|gb|EED19959.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
gi|218720541|gb|EED19960.1| RAB GTPase Vps21/Ypt51, putative [Talaromyces stipitatus ATCC
10500]
Length = 261
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 116/202 (57%), Gaps = 39/202 (19%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q ++ +KFEIWDTAGQER
Sbjct: 16 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPTRMIKFEIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL---- 127
+ SLAPMYYR A AA++VYD+T AS +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 76 FASLAPMYYRNAQAALVVYDLTKPASLVKAKHWVAELQRQASPGIVIALVGNKLDLTDSG 135
Query: 128 -----------------------------------LDARKVTAEEAQAYAQENGLFFMET 152
DARK++ EA YA+E GL F ET
Sbjct: 136 AGQANEDAAEAENNGVPGPDAEGDEEVENNDISTTTDARKISTREASTYAEEEGLLFFET 195
Query: 153 SAKTATNVNDIFYEIAKRLPRV 174
SAKT NV ++F IA +P
Sbjct: 196 SAKTGYNVAEVFTAIANAIPET 217
>gi|367012131|ref|XP_003680566.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
gi|359748225|emb|CCE91355.1| hypothetical protein TDEL_0C04660 [Torulaspora delbrueckii]
Length = 211
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 120/166 (72%), Gaps = 3/166 (1%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + + D TVKFEIWDTAGQ
Sbjct: 7 SVKLVLLGEAAVGKSSIVLRFVSNDFTENKEPTIGAAFLTQRVNIGDETVKFEIWDTAGQ 66
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + +++AL GNK D+L+
Sbjct: 67 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKGIIIALVGNKIDVLE 126
Query: 130 A---RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+ RKV EEA+ A+E L + ETSAKT NVN++F I +++P
Sbjct: 127 SGEERKVAREEAEKLAEEENLLYFETSAKTGENVNEVFLAIGEKIP 172
>gi|328874267|gb|EGG22633.1| hypothetical protein DFA_04763 [Dictyostelium fasciculatum]
Length = 661
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 118/163 (72%), Gaps = 4/163 (2%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA-TVKFEIWDTAGQ 69
KLVLLGD+ GK+ + R V+ +F+ +STIGAAF + + +++ TVK EIWDTAGQ
Sbjct: 40 VKLVLLGDMNTGKTCIASRLVRNEFVP-TDSTIGAAFLVKNMTLDNGNTVKLEIWDTAGQ 98
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SL PMYYRGA+AA+IVYDIT + +FE K+WV ELQ Q +PN+++ALAGNKAD L
Sbjct: 99 ERYRSLTPMYYRGASAAVIVYDITKKNTFETLKRWVSELQKQASPNLILALAGNKAD-LP 157
Query: 130 ARKVTAEEAQAYAQENG-LFFMETSAKTATNVNDIFYEIAKRL 171
R+V +E Y E G + F ETSA+T NVN++F EI K++
Sbjct: 158 HREVQVDEVSKYISELGDVIFFETSAQTGFNVNELFTEICKKI 200
>gi|449268714|gb|EMC79563.1| Ras-related protein Rab-17 [Columba livia]
Length = 214
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 8/194 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG+ GKSSL R+VK F E T+G +FF+QTL + ATV+FEIWDTAGQE+
Sbjct: 21 KVVLLGNTSVGKSSLAYRYVKNDFKE-SLPTVGCSFFTQTLNLEVATVRFEIWDTAGQEK 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDA 130
YHS+ +YYRGA AA++VYDITN+ + RAK W+ +L+ + P+ +V+AL GNK DL
Sbjct: 80 YHSVCHLYYRGAHAALLVYDITNKETLNRAKLWLTDLEKEFLPDEIVIALVGNKTDLAAK 139
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL--PRVQPAPNPS---GMVL 185
R+V EE + +A+ GL FMETSAK+ VNDIF IA+ L + A NPS G
Sbjct: 140 REVATEEGEEFARTKGLLFMETSAKSNHQVNDIFMAIAQELLEREQEKASNPSPSRGRSA 199
Query: 186 MDRPGERTASASCC 199
+D G+ CC
Sbjct: 200 VDL-GQSRVRTGCC 212
>gi|254586679|ref|XP_002498907.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
gi|238941801|emb|CAR29974.1| ZYRO0G21384p [Zygosaccharomyces rouxii]
Length = 218
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 125/214 (58%), Gaps = 27/214 (12%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND------ATVKFEIWD 65
KLVLLGD GKSS+V RFVK F EF+ESTIGAAF SQT+ + D +KFEIWD
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKIEDKGSQQEVVIKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNK 124
TAGQERY SLAPMYYR A AA++VYD+T Q S +A+ WV EL+ + G ++V+ L GNK
Sbjct: 65 TAGQERYKSLAPMYYRNANAALVVYDVTQQDSLAKAQGWVNELKTKVGEDDLVICLVGNK 124
Query: 125 ADLL--------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-- 174
DL + V + +A+ YA E GL F E SAKT V +F I ++L
Sbjct: 125 LDLCTEEGESSSKPKAVESSDAEGYANEQGLLFHEVSAKTGEGVKQVFQSIGEKLYEFKK 184
Query: 175 ---------QPAPNPSGMVLMDRPGERTASASCC 199
Q A + V + RP A+ SCC
Sbjct: 185 HELANSKGRQGAGGDTVNVQLQRPSTNDAT-SCC 217
>gi|345570560|gb|EGX53381.1| hypothetical protein AOL_s00006g247 [Arthrobotrys oligospora ATCC
24927]
Length = 247
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 127/219 (57%), Gaps = 37/219 (16%)
Query: 1 MATTGNK-NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATV 59
MA G K + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+
Sbjct: 1 MAEGGPKPSSSVKLVLLGEAAVGKSSLVLRFVNDDFQENREPTIGAAFLTQKCNLPSRTI 60
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
KFEIWDTAGQER+ SLAPMYYR A +A++VYD+T +S +AK WV ELQ Q +P +V+A
Sbjct: 61 KFEIWDTAGQERFASLAPMYYRNAQSALVVYDLTKASSLAKAKHWVAELQRQASPGIVIA 120
Query: 120 LAGNKADLLD------------------------------ARKVTAEEAQAYAQENGLFF 149
L GNK DL AR++T EA++YA E GL F
Sbjct: 121 LVGNKLDLTSQSTGLENSMGGLSLSAAAGDGDEEEEEEGDARQITTAEAKSYADEEGLLF 180
Query: 150 METSAKTATNVNDIFYEIAKRLP------RVQPAPNPSG 182
ETSAKT NV ++F IA +P R P N +G
Sbjct: 181 FETSAKTGHNVQEVFTAIANAIPESTLKTRGGPGSNRAG 219
>gi|403214773|emb|CCK69273.1| hypothetical protein KNAG_0C01600 [Kazachstania naganishii CBS
8797]
Length = 214
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 127/210 (60%), Gaps = 21/210 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV-----NDATVKFEIWDT 66
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQT+ V + +KFEIWDT
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQTIKVESEDQQEVVIKFEIWDT 64
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKA 125
AGQERY SLAPMYYR A AA++VYD+T + S +AK WV+EL+ + G+ ++V+ L GNK
Sbjct: 65 AGQERYKSLAPMYYRNANAALVVYDVTQEDSLNKAKAWVEELKNKVGDEDLVIFLVGNKV 124
Query: 126 DLL------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----- 174
DL D R V A A+ YA++ GL F E SAKT V ++F I +RL
Sbjct: 125 DLCEGSDNEDKRAVAATLAKQYAEDQGLMFDEVSAKTGHGVKEVFQAIGQRLYDTKKEEL 184
Query: 175 ---QPAPNPSGMVLMDRPGERTASAS-CCS 200
Q G V ++ P T + CCS
Sbjct: 185 ATRQRGNGNDGQVDINVPRPSTNDTTGCCS 214
>gi|146417699|ref|XP_001484817.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
gi|146390290|gb|EDK38448.1| hypothetical protein PGUG_02546 [Meyerozyma guilliermondii ATCC
6260]
Length = 209
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 129/203 (63%), Gaps = 19/203 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQ--TLAVNDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F +ESTIGAAF +Q TL +ATVKFEIWDTAGQ
Sbjct: 11 KLVLLGESAVGKSSVVHRFVKNTFDNMRESTIGAAFLTQSVTLPEINATVKFEIWDTAGQ 70
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDITN +SF++A+ W++EL+ Q +V+ L GNKADL D
Sbjct: 71 ERYKSLAPMYYRNAHAALCVYDITNSSSFQKAQNWIKELKKQAPEGIVICLVGNKADLED 130
Query: 130 ARKVTAEEAQAYAQE---NGL--FFMETSAKTATNVNDIFYEIAKRLP---RVQPAPNP- 180
R+V A AY +E G+ F E SAK+ V +IF +AK LP + A P
Sbjct: 131 ERQVDANAVTAYVEELRGEGIQVFTEECSAKSGEGVLEIFTNVAKALPVEETINGASKPS 190
Query: 181 ----SGMVLMDRPGERTASASCC 199
SG+ L RP ++ CC
Sbjct: 191 AGRQSGVELNRRPQQQ----GCC 209
>gi|344302341|gb|EGW32646.1| hypothetical protein SPAPADRAFT_61705 [Spathaspora passalidarum
NRRL Y-27907]
Length = 223
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 130/212 (61%), Gaps = 25/212 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F E +ESTIGAAF +QT+ + D T+KFEIWDTAGQ
Sbjct: 13 KLVLLGESAVGKSSIVHRFVKNTFDELRESTIGAAFLTQTITIPETDTTIKFEIWDTAGQ 72
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDIT++ SF RA+ W++EL+ Q +V+AL GNK+DL D
Sbjct: 73 ERYKSLAPMYYRNANAALCVYDITSRVSFNRAQDWIKELRKQAPEGIVIALVGNKSDLSD 132
Query: 130 ARKVTAEEAQAYAQE---------NGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNP 180
R+V E + Y ++ + + E SAKT V ++F I + LP V+ A N
Sbjct: 133 NREVELSEVEEYVEQYNSEATGGGSTIIIAECSAKTGDGVLEVFNRIGRALP-VEEAINA 191
Query: 181 ------------SGMVLMDRP-GERTASASCC 199
+G V ++RP + SCC
Sbjct: 192 AGGRARQAGGRRAGGVDLNRPRAQAQQGGSCC 223
>gi|365759643|gb|EHN01421.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 234
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 131/231 (56%), Gaps = 43/231 (18%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN--------DATVKFEI 63
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQ++ ++ D +KFEI
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNGAKDVVIKFEI 64
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAG 122
WDTAGQERY SLAPMYYR A AA++VYDIT + S ++A+ WV EL+ + G+ ++V+ L G
Sbjct: 65 WDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLG 124
Query: 123 NKADLLD--------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVND 162
NK DL R ++ EEA+ YAQE GL F E SAKT + +
Sbjct: 125 NKVDLCQDMPGSETIPELNEGEDDEQKVRAISTEEAKQYAQEQGLLFREVSAKTGDGIKE 184
Query: 163 IFYEIAKRL-------------PRVQPAPNPSGMVLMDRPGERTASASCCS 200
IF +I ++L ++ N + + RP + SCCS
Sbjct: 185 IFQDIGEKLYDSKKDEILSKQNRQINGGNNGQVDIHLQRPSTNDPT-SCCS 234
>gi|68070427|ref|XP_677125.1| GTP binding protein [Plasmodium berghei strain ANKA]
gi|56497115|emb|CAH96057.1| P. falciparum GTP binding protein RAB5, putative [Plasmodium
berghei]
Length = 153
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
Query: 45 AAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKW 104
AAF +Q + + + T+KFEIWDTAGQERY SLAPMYYRGAAAA+IVYDITN+ SFE AK W
Sbjct: 1 AAFMTQLIDIGECTIKFEIWDTAGQERYRSLAPMYYRGAAAAVIVYDITNKKSFEGAKGW 60
Query: 105 VQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
+ EL++ + ++V+ALAGNK DL R + E A+++A N + F+ETSAKT TNVND+F
Sbjct: 61 IHELKSVHSNDIVIALAGNKCDLEKNRVIDKELAESFANSNNILFIETSAKTGTNVNDLF 120
Query: 165 YEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 199
+IAK+LPR + + G + ++ E S CC
Sbjct: 121 LKIAKKLPRNKKDKDTYGGIQINNTEE--TSKKCC 153
>gi|349802461|gb|AEQ16703.1| putative muscle ras oncogene [Pipa carvalhoi]
Length = 130
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 97/110 (88%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+ GKSSLVLRFVKGQF EFQE+TIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 21 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
YHSLAPMYYRGA AAI+V+DIT +F+RAK WV+ELQ Q +PN+V+ALA
Sbjct: 81 YHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALA 130
>gi|6322866|ref|NP_012939.1| Ypt52p [Saccharomyces cerevisiae S288c]
gi|549796|sp|P36018.1|YPT52_YEAST RecName: Full=GTP-binding protein YPT52
gi|483599|emb|CAA53770.1| ypt52p [Saccharomyces cerevisiae]
gi|486429|emb|CAA82086.1| YPT52 [Saccharomyces cerevisiae]
gi|151941558|gb|EDN59921.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409836|gb|EDV13101.1| GTP-binding protein YPT52 [Saccharomyces cerevisiae RM11-1a]
gi|207343416|gb|EDZ70879.1| YKR014Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272630|gb|EEU07608.1| Ypt52p [Saccharomyces cerevisiae JAY291]
gi|259147845|emb|CAY81095.1| Ypt52p [Saccharomyces cerevisiae EC1118]
gi|285813272|tpg|DAA09169.1| TPA: Ypt52p [Saccharomyces cerevisiae S288c]
gi|323304136|gb|EGA57914.1| Ypt52p [Saccharomyces cerevisiae FostersB]
gi|323308216|gb|EGA61465.1| Ypt52p [Saccharomyces cerevisiae FostersO]
gi|323332610|gb|EGA74016.1| Ypt52p [Saccharomyces cerevisiae AWRI796]
gi|323336757|gb|EGA78021.1| Ypt52p [Saccharomyces cerevisiae Vin13]
gi|323347623|gb|EGA81888.1| Ypt52p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579576|dbj|GAA24738.1| K7_Ypt52p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764667|gb|EHN06189.1| Ypt52p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298155|gb|EIW09253.1| Ypt52p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 234
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 119/189 (62%), Gaps = 29/189 (15%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN--------DATVKFEI 63
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQ++ ++ D +KFEI
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEI 64
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAG 122
WDTAGQERY SLAPMYYR A AA++VYDIT + S ++A+ WV EL+ + G+ ++V+ L G
Sbjct: 65 WDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLG 124
Query: 123 NKADLLD--------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVND 162
NK DL R ++ EEA+ YAQE GL F E SAKT V +
Sbjct: 125 NKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKE 184
Query: 163 IFYEIAKRL 171
IF +I ++L
Sbjct: 185 IFQDIGEKL 193
>gi|432098875|gb|ELK28370.1| Ras-related protein Rab-5C [Myotis davidii]
Length = 184
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/117 (71%), Positives = 97/117 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVL FVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLHFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALA 121
DTAGQERYHSLAPMYYRG AAI+VYDITN +F RA+ WV+ELQ Q +PN+V+ALA
Sbjct: 76 DTAGQERYHSLAPMYYRGVQAAIMVYDITNTDTFARAENWVKELQRQASPNIVIALA 132
>gi|398411932|ref|XP_003857299.1| hypothetical protein MYCGRDRAFT_66333 [Zymoseptoria tritici IPO323]
gi|339477184|gb|EGP92275.1| hypothetical protein MYCGRDRAFT_66333 [Zymoseptoria tritici IPO323]
Length = 252
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 116/190 (61%), Gaps = 29/190 (15%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F +E TIGAAF +Q + + +KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVSNAFQPNKEPTIGAAFLTQKCTLPNRIIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYDIT +S +A+ WV ELQ Q +P +V+AL GNK DL +
Sbjct: 74 FASLAPMYYRNAQAALVVYDITKASSLVKARHWVAELQRQASPGIVIALVGNKLDLCEED 133
Query: 130 ---------------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVND 162
ARKV+ EA+ YA E GL F ETSAKT NV++
Sbjct: 134 GEGGENSTGEADTEGEDTPEGEDVDAAARKVSKAEAKRYADEEGLLFFETSAKTGENVSE 193
Query: 163 IFYEIAKRLP 172
+F IA +P
Sbjct: 194 VFTAIANAIP 203
>gi|344230490|gb|EGV62375.1| GTP-binding protein of the rab/ypt family [Candida tenuis ATCC
10573]
Length = 218
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 116/168 (69%), Gaps = 7/168 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA--TVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F F+ESTIGAAF +QT+ + ++ T+KFEIWDTAGQ
Sbjct: 14 KLVLLGESAVGKSSIVHRFVKNTFDNFRESTIGAAFLTQTITLPESKTTIKFEIWDTAGQ 73
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDITN +SF +A+ W++EL+ Q +V+ L GNK DL +
Sbjct: 74 ERYKSLAPMYYRNAHAALCVYDITNPSSFTKAQDWIKELKKQAPEGIVICLVGNKLDLSE 133
Query: 130 ARKVTAEEAQAYA-----QENGLFFMETSAKTATNVNDIFYEIAKRLP 172
R+V +E Y QEN + + E SAK+ V DIF +I + LP
Sbjct: 134 ERQVDEQEVLQYVQELNHQENNVLWAECSAKSGEGVLDIFNKIGRALP 181
>gi|347827173|emb|CCD42870.1| similar to vacuolar sorting-associated protein [Botryotinia
fuckeliana]
Length = 238
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 115/186 (61%), Gaps = 26/186 (13%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ SSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 16 KLVLLGEAA---SSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A +A++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 73 FASLAPMYYRNAQSALVVYDLTKPTSLAKAKHWVAELQRQASPGIVIALVGNKLDLTNES 132
Query: 129 --------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
DARKV+ EA++YA+E GL F ETSAK TNV ++F IA
Sbjct: 133 DDSSNNLGDEESAEGEDSGGDARKVSTAEAKSYAEEEGLLFFETSAKLGTNVTEVFTAIA 192
Query: 169 KRLPRV 174
+P
Sbjct: 193 NAIPET 198
>gi|73535775|pdb|1Z0J|A Chain A, Structure Of Gtp-Bound Rab22q64l Gtpase In Complex With
The Minimal Rab Binding Domain Of Rabenosyn-5
Length = 170
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 114/161 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS++ RFV+ F TIGA+F ++T+ + KF IWDTAG ER
Sbjct: 8 KVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLER 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R
Sbjct: 68 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+V +A+ YA F+ETSAK A N+N++F EI++R+P
Sbjct: 128 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 168
>gi|50411080|ref|XP_457015.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
gi|49652680|emb|CAG85000.1| DEHA2B01144p [Debaryomyces hansenii CBS767]
Length = 224
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 123/185 (66%), Gaps = 13/185 (7%)
Query: 1 MATTGNKNINA------KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQ--TL 52
M+TTG+ N ++ KLVLLG+ GKSS+V RFVK F +ESTIGAAF +Q TL
Sbjct: 1 MSTTGSANSSSNRFAQFKLVLLGESAVGKSSIVHRFVKNTFDNMRESTIGAAFLTQSITL 60
Query: 53 AVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQG 112
N+ TVKFEIWDTAGQERY SLAPMYYR A AA+ VYDIT+++SF +A+ W++EL+ Q
Sbjct: 61 PENNTTVKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFTKAQDWIKELKKQA 120
Query: 113 NPNMVMALAGNKADLLDARKVTAEEAQAYAQE-----NGLFFMETSAKTATNVNDIFYEI 167
+V+ L GNKADL + R+V E Y E N + E SAK+ V DIF ++
Sbjct: 121 PEGIVICLVGNKADLEENREVDEREVSQYIDELNQEDNKMVAAECSAKSGDGVVDIFTKV 180
Query: 168 AKRLP 172
A+ LP
Sbjct: 181 ARALP 185
>gi|71755237|ref|XP_828533.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70833919|gb|EAN79421.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261334411|emb|CBH17405.1| small GTP-binding protein Rab5b, putative [Trypanosoma brucei
gambiense DAL972]
Length = 203
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 124/192 (64%), Gaps = 7/192 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD G GKSSLV R K ++ + Q ST+GA+F V D V F+IWDTAGQER
Sbjct: 14 KIVLLGDSGVGKSSLVQRLAKNEWCDNQNSTVGASFLRYVCTVGDTAVNFDIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLA MYYRGAAAA++VY+I + +FERAK WV+EL A +P ++ L GNK+DL
Sbjct: 74 YKSLASMYYRGAAAALVVYEIPSWETFERAKHWVREL-ATNSPETIVILVGNKSDLRGTS 132
Query: 132 K-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN---PSGMVLMD 187
V++EEA YA+E L F E SAK + V+++F +IA+RL V N SG VL
Sbjct: 133 GCVSSEEAATYARELNLLFSEASAKDGSGVSEVFMQIAQRL--VASNNNNTVHSGGVLGG 190
Query: 188 RPGERTASASCC 199
+P S+ CC
Sbjct: 191 QPNSTRRSSGCC 202
>gi|365758696|gb|EHN00526.1| Ypt53p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 220
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 115/176 (65%), Gaps = 6/176 (3%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
T G + KLVLLG+ GKSS+VLRF+ F E +E TIGAAF ++ + ND +KFE
Sbjct: 5 TAGIPTLTIKLVLLGESAVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRNDKAIKFE 64
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQER+ LAPMYYR A AA++V+DITN+ SF +A+ WV+EL + N+++AL G
Sbjct: 65 IWDTAGQERFAPLAPMYYRNAQAALVVFDITNEQSFRKAQNWVEELHEKLGDNIIIALVG 124
Query: 123 NKADLL------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
NK DLL R V +E Q Q+ L + E SAKT N+ ++F + +++P
Sbjct: 125 NKMDLLTMQGEISNRAVNEDEIQNLCQQENLLYFEVSAKTGKNIQEVFQAVGEKIP 180
>gi|365983882|ref|XP_003668774.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
gi|343767541|emb|CCD23531.1| hypothetical protein NDAI_0B04980 [Naumovozyma dairenensis CBS 421]
Length = 227
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 130/226 (57%), Gaps = 40/226 (17%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA------TVKFEIWD 65
KLVLLGD GKSS+V RFVK F E +ESTIGAAF +QT+ + D +KFEIWD
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGAAFLAQTIKIKDTETQEDIDIKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNK 124
TAGQERY SLAPMYYR A AA++VYD+T + S +A WV EL+++ G+ ++V+ L GNK
Sbjct: 65 TAGQERYKSLAPMYYRNANAALVVYDLTQKNSLSKAMSWVDELKSKVGDEDLVIYLVGNK 124
Query: 125 ADLLD---------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
DL D R VT +EA +YA++ GL F E SAKT V ++F I +
Sbjct: 125 LDLCDNVENRGGKEQEEEENKRVVTTQEADSYAKDQGLLFAEISAKTGQGVKEVFQTIGE 184
Query: 170 RLPRVQPAPNPSGMVLMDRPGERTAS---------------ASCCS 200
+L ++ P + +R R +S SCCS
Sbjct: 185 KLYEIKK---PELLAKKNREYGRNSSEAVDINIQRPNTNDPTSCCS 227
>gi|440791438|gb|ELR12676.1| Rasrelated protein Rab5, putative [Acanthamoeba castellanii str.
Neff]
Length = 218
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 130/210 (61%), Gaps = 13/210 (6%)
Query: 4 TGNK----NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATV 59
TGNK +I+AK+VLLGD G GK+SL LRFV+ F T+GA+F ++ L ++D +
Sbjct: 9 TGNKPKIASIDAKIVLLGDTGVGKTSLALRFVQDAFSSRTAPTVGASFLTKVLLISDCKI 68
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
K IWDTAGQER+ SLAPMYYRGA AA+I +DIT + SF++ + WV+ELQ + +++
Sbjct: 69 KLRIWDTAGQERFRSLAPMYYRGACAAVIAFDITREESFKKMQDWVKELQINLSEEIILV 128
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENG-LFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
+ GNKADL RKV+ A+ YA+ G L ++E SAKT + +IF IA +L + A
Sbjct: 129 VVGNKADLEKFRKVSKATAEDYARNIGALGYVEASAKTGDGIEEIFMNIAHKLNEKRLAS 188
Query: 179 --------NPSGMVLMDRPGERTASASCCS 200
+PSG + GE CC+
Sbjct: 189 PDGMDSSRSPSGGRRLVDDGEGDTGRRCCT 218
>gi|50418070|gb|AAH77537.1| LOC445870 protein, partial [Xenopus laevis]
Length = 215
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 110/155 (70%)
Query: 18 DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAP 77
D G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER+ +LAP
Sbjct: 35 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQERFRALAP 94
Query: 78 MYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEE 137
MYYRG+ AAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL D R+V +E
Sbjct: 95 MYYRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLNDVREVLEKE 154
Query: 138 AQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
A+ YA F+ETSAK A N+N++F EI+KR+P
Sbjct: 155 AKDYADSINAVFVETSAKNAININELFIEISKRIP 189
>gi|358379349|gb|EHK17029.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 229
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 129/209 (61%), Gaps = 18/209 (8%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA + + KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+K
Sbjct: 1 MAEAPKPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQER+ SLAPMYYR A AA++VYDIT S +A+ WV ELQ Q +P +V+AL
Sbjct: 61 FEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPTSLVKARHWVAELQRQASPGIVIAL 120
Query: 121 AGNKADL----------------LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 164
GNK DL DARKV+ EEAQAYA+E L F ETSAKT NV ++F
Sbjct: 121 VGNKLDLAGESQGASEEAEGGEEGDARKVSTEEAQAYAEEESLLFFETSAKTGHNVTEVF 180
Query: 165 YEIAKRLPR--VQPAPNPSGMVLMDRPGE 191
IA +P ++ A P +R GE
Sbjct: 181 TAIANAIPETSLKSARGPGAAGTANRAGE 209
>gi|401837860|gb|EJT41716.1| YPT53-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 220
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
T G + KLVLLG+ GKSS+VLRF+ F E +E TIGAAF ++ + +D +KFE
Sbjct: 5 TAGIPTLTIKLVLLGESAVGKSSIVLRFISNDFTESREPTIGAAFLTKRITRDDKAIKFE 64
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
IWDTAGQER+ LAPMYYR A AA++V+DITN+ SF +A+ WV+EL + N+++AL G
Sbjct: 65 IWDTAGQERFAPLAPMYYRNAQAALVVFDITNEQSFRKAQDWVEELHEKLGDNIIIALVG 124
Query: 123 NKADLL------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
NK DLL R V +E Q Q+ L + E SAKT N++++F + +++P
Sbjct: 125 NKMDLLTMQGEISNRAVNEDEIQNLCQQENLLYFEVSAKTGKNIHEVFQAVGEKIP 180
>gi|189188490|ref|XP_001930584.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330926522|ref|XP_003301495.1| hypothetical protein PTT_13015 [Pyrenophora teres f. teres 0-1]
gi|187972190|gb|EDU39689.1| GTP-binding protein YPT52 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311323627|gb|EFQ90397.1| hypothetical protein PTT_13015 [Pyrenophora teres f. teres 0-1]
Length = 243
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 115/189 (60%), Gaps = 28/189 (14%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLV+RFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL---- 127
+ SLAPMYYR A AA++VYDIT +S +A+ WV EL Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDITKPSSLTKAQHWVAELHRQASPGIVIALVGNKFDLAAAA 134
Query: 128 ------------------------LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDI 163
D+R+V ++ A++YA E L F ETSAKT NV D+
Sbjct: 135 GEESPEDADAAPAAEGDEEPTEDGADSRRVPSKTAKSYADEESLLFFETSAKTGHNVADV 194
Query: 164 FYEIAKRLP 172
F IA +P
Sbjct: 195 FTAIANAIP 203
>gi|156382558|ref|XP_001632620.1| predicted protein [Nematostella vectensis]
gi|156219678|gb|EDO40557.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 120/191 (62%), Gaps = 2/191 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKS LV RFV F TIGAAF ++ + VND KF IWDTAGQER
Sbjct: 14 KVCLLGDAGVGKSCLVHRFVSDIFNASSPPTIGAAFMTKMMIVNDKAYKFNIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SLAP+YYR AAAAI+VYDIT +++F + W++ELQ G ++V+A+AGNK D D R
Sbjct: 74 FKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ-PAPNPSGMVLMDRPG 190
V ++AQ +A F ETSA T+ NV+ +F E+ K+LP P + RP
Sbjct: 134 DVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEELCKKLPHENMEVPYHHKKIGTFRPE 193
Query: 191 ER-TASASCCS 200
ER S +CCS
Sbjct: 194 ERPNKSGNCCS 204
>gi|322709279|gb|EFZ00855.1| Rab5-like protein ypt51 [Metarhizium anisopliae ARSEF 23]
Length = 351
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 125/199 (62%), Gaps = 19/199 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 133 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPSRTIKFEIWDTAGQER 192
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 193 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLASDS 252
Query: 129 --------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR- 173
DARKV+ EEA+AYA+E L F ETSAKT NV ++F IA +P
Sbjct: 253 ATGNETAEDGEESGDARKVSTEEAKAYAEEESLLFFETSAKTGHNVTEVFTAIANAIPET 312
Query: 174 -VQPAPNPSGMVLMDRPGE 191
++ A P +R GE
Sbjct: 313 SLKSARGPGAAGTANRAGE 331
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 126/193 (65%), Gaps = 5/193 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GK++++ +F +G+F++ ++TIG F S+ + ++D TVK +IWDTAGQER
Sbjct: 13 KLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+I+YDIT +FE KW++EL+ +P++ + + GNK D R
Sbjct: 73 YRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQKHIR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR----VQPAPNPSGMVLMD 187
+V + A AYAQ NG+ F+ETSAK TNV D F I +++ + V+P P P+ V+ D
Sbjct: 133 QVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTKFVVAD 192
Query: 188 RPGER-TASASCC 199
+ S+ CC
Sbjct: 193 TDVVKPEKSSGCC 205
>gi|451998021|gb|EMD90486.1| hypothetical protein COCHEDRAFT_1139945 [Cochliobolus
heterostrophus C5]
Length = 243
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 115/189 (60%), Gaps = 28/189 (14%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLV+RFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGAAFLTQKCNLPSRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYDIT +S +A+ WV EL Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDITKPSSLTKAQHWVAELHRQASPGIVIALVGNKFDLATAG 134
Query: 129 -------------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDI 163
D+R+V ++ A+AYA E L F ETSAKT NV ++
Sbjct: 135 DEDRPEDADAAPAAEGEEEQAQDDQDSRRVPSKTAKAYADEESLLFFETSAKTGHNVAEV 194
Query: 164 FYEIAKRLP 172
F IA +P
Sbjct: 195 FTAIANAIP 203
>gi|384499462|gb|EIE89953.1| hypothetical protein RO3G_14664 [Rhizopus delemar RA 99-880]
Length = 193
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 115/163 (70%), Gaps = 4/163 (2%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLGD GKSS++ ++V FIE +E TIGAAF ++ ++ D +KF+IWDTAGQ
Sbjct: 13 SVKLVLLGDSSVGKSSIITKYVTDTFIEGREVTIGAAFLAKICSIEDRIIKFDIWDTAGQ 72
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ SLAPMYYR AAAA+IV+D+TN SF AK+WV EL ++++AL GNK DL
Sbjct: 73 ERFRSLAPMYYRNAAAAMIVFDVTNYNSFTGAKRWVDELPL----DVMIALVGNKIDLEQ 128
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
R+V+ +E + Y E L ++ETSA+ N++ +F EIAK +P
Sbjct: 129 DRQVSVDEIKEYVAEKDLIYIETSARLGINIHHVFNEIAKNVP 171
>gi|451845469|gb|EMD58781.1| hypothetical protein COCSADRAFT_128298 [Cochliobolus sativus
ND90Pr]
Length = 243
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 115/189 (60%), Gaps = 28/189 (14%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLV+RFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGAAFLTQKCNLPSRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYDIT +S +A+ WV EL Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDITKPSSLTKAQHWVAELHRQASPGIVIALVGNKFDLATAG 134
Query: 129 -------------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDI 163
D+R+V ++ A+AYA E L F ETSAKT NV ++
Sbjct: 135 DEDRPEDTDAAPAAEGEEEQAQDDQDSRRVPSKAAKAYADEESLLFFETSAKTGHNVAEV 194
Query: 164 FYEIAKRLP 172
F IA +P
Sbjct: 195 FTAIANAIP 203
>gi|225716768|gb|ACO14230.1| Ras-related protein Rab-17 [Esox lucius]
Length = 240
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 113/170 (66%), Gaps = 2/170 (1%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
T +K + K+VLLG G GKSSL LRF K F E T+G A+ +Q + ++D T++ E
Sbjct: 33 TRDSKILRVKMVLLGSTGVGKSSLALRFSKNDFKE-SSPTVGCAYLTQVVCLSDVTLRLE 91
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALA 121
IWDTAGQE+YHS+ P+YYRGA A++VYDI+ + SF RA+ W +ELQ P + VM L
Sbjct: 92 IWDTAGQEKYHSVTPLYYRGAHVALVVYDISKRESFIRAQLWPRELQQHYVPGSTVMVLV 151
Query: 122 GNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
GNK DL D R+VT +E A + GL FMETSAK+ V+++ IA R+
Sbjct: 152 GNKCDLSDIRQVTLQEGNRLAIDRGLLFMETSAKSGNQVSELLLAIAHRV 201
>gi|340380299|ref|XP_003388660.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 163
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 113/159 (71%), Gaps = 1/159 (0%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
K+ LLGDVG GK+SLV RFV F + +T+GA+F S++L V+++T+KF+IWDTAGQE
Sbjct: 6 VKVCLLGDVGVGKTSLVGRFVHDTFSQNITTTLGASFMSKSLTVDNSTIKFQIWDTAGQE 65
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SL PMYYR AAAAI+VYDITN+ SF + W+ EL G PN+V+A+AGNK DL D
Sbjct: 66 RYRSLLPMYYRNAAAAIVVYDITNEGSFTVLQDWIAELHRLGPPNIVLAIAGNKCDLEDK 125
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
R++ YA E F ETSA TA NV ++F EI++
Sbjct: 126 RELNKVRL-IYASEVNAIFGETSALTARNVEEMFIEISE 163
>gi|403414221|emb|CCM00921.1| predicted protein [Fibroporia radiculosa]
Length = 275
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 123/218 (56%), Gaps = 41/218 (18%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
+++ KLVLLG+ GKSS+VLRFV +F +E TIGAAF +Q + D +++EIWDT
Sbjct: 11 RSVQVKLVLLGEAAVGKSSVVLRFVSNEFQANKEPTIGAAFLTQKCRLEDRVLRYEIWDT 70
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQER+HSLAPMYYR A AA++VYD+T +S E+AK WV+ELQ Q NPN+V+ALAGNK D
Sbjct: 71 AGQERFHSLAPMYYRNAQAAVVVYDVTKASSLEKAKTWVKELQRQANPNIVIALAGNKVD 130
Query: 127 LL-------------------DARKVTAEEAQAYAQEN-----------------GLFFM 150
L+ DA E A A ++ GL F
Sbjct: 131 LVQPSPSVSGSPATESEDEADDATATPGENAGAASEPESLRQVPREEAEAYAQEAGLLFF 190
Query: 151 ETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDR 188
ETSAKT V +IF EI P P + + DR
Sbjct: 191 ETSAKTGEGVVEIFTEIG-----TSPTPPGNSWLTSDR 223
>gi|401624887|gb|EJS42926.1| ypt52p [Saccharomyces arboricola H-6]
Length = 236
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 131/233 (56%), Gaps = 45/233 (19%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN----------DATVKF 61
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQ++ ++ D +KF
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNEANPKDVVIKF 64
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMAL 120
EIWDTAGQERY SLAPMYYR A AA++VYDIT + S ++A+ WV EL+ + G+ ++V+ L
Sbjct: 65 EIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYL 124
Query: 121 AGNKADLLD--------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNV 160
GNK D+ R ++ EEA YAQ+ GL F E SAKT +
Sbjct: 125 LGNKVDICQETPVVETSPESNEAGNDEQKVRAISTEEAGQYAQDQGLLFREVSAKTGEGI 184
Query: 161 NDIFYEIAKRL-------------PRVQPAPNPSGMVLMDRPGERTASASCCS 200
+IF +I ++L ++ A N + + RP + SCCS
Sbjct: 185 KEIFQDIGEKLYDLKKDEFLSKQNRQINGANNGQVDIHLQRPSTNDPT-SCCS 236
>gi|407420015|gb|EKF38411.1| ras-related protein rab-5, putative [Trypanosoma cruzi marinkellei]
Length = 200
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 130/190 (68%), Gaps = 3/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD G GKSSLV R K ++ E Q ST+GA+FF + V+D V F+IWDTAGQER
Sbjct: 12 KVVLLGDSGVGKSSLVQRLAKDEWNENQNSTVGASFFRYSCPVDDTAVNFDIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLA MYYRGAAAA++VY++ +FERAK WV+EL A +P ++ L GNK+DL + R
Sbjct: 72 YKSLASMYYRGAAAALVVYELPLYETFERAKYWVRELAAN-SPETIVTLVGNKSDLANRR 130
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL--PRVQPAPNPSGMVLMDRP 189
V+AEEA AYA+E L F+E SAK + V+DIF +IA+RL Q G++ +P
Sbjct: 131 NVSAEEAAAYAKELDLMFIEASAKDGSRVHDIFEKIARRLVAANSQNTVREGGVIGGRQP 190
Query: 190 GERTASASCC 199
G++T CC
Sbjct: 191 GKKTRQFGCC 200
>gi|448087841|ref|XP_004196426.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359377848|emb|CCE86231.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 126/206 (61%), Gaps = 18/206 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +Q++ + ATVKFEIWDTAGQ
Sbjct: 18 KLVLLGESAVGKSSIVHRFVKNSFDDMRESTIGAAFLTQSVKLPEKSATVKFEIWDTAGQ 77
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDIT+++SF RA++W++EL+ Q N+ + L GNK D+ +
Sbjct: 78 ERYKSLAPMYYRNANAALCVYDITSRSSFNRAQEWIKELKKQAPENITICLVGNKTDMQE 137
Query: 130 ARKVTAEEAQAYA---QENGLFFM--ETSAKTATNVNDIFYEIAKRLP-----------R 173
R+V EE Y Q G + E SAK+ V +IF IA LP R
Sbjct: 138 EREVNQEEVDEYITQLQNEGTILISGECSAKSGDGVLEIFTHIANALPVEEVINNSPRNR 197
Query: 174 VQPAPNPSGMVLMDRPGERTASASCC 199
+ +G+ L P + A+ CC
Sbjct: 198 SLGSRRSAGVDLGRAPKQNQANTGCC 223
>gi|429328144|gb|AFZ79904.1| Ras-related rab6 small GTP-binding protein, putative [Babesia equi]
Length = 224
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFE 62
T G +N K+VLLG+ AGK+S+V RFV FI +TIG F S+T+ N T++ +
Sbjct: 8 TPGQRN---KIVLLGEQSAGKTSIVTRFVYDHFIPAYAATIGIDFLSKTVTANGKTMRLQ 64
Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAG 122
+WDTAGQER+ SL P Y R ++AAI+VYDITN+ SF R K+WVQE++ V+ + G
Sbjct: 65 LWDTAGQERFRSLMPSYIRDSSAAIVVYDITNRDSFTRTKQWVQEIKDMRGDKAVIVIVG 124
Query: 123 NKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA-KRLPRVQPAPNPS 181
NK DLLD RKV+ EE +++A+E F ETSAK NV+++F +A K L +P P
Sbjct: 125 NKTDLLDKRKVSYEEGESHAKEMNCLFRETSAKNGDNVHELFNLVAVKLLKTTEPEPVSD 184
Query: 182 GMVLMD-RPGERTASASC 198
+V +D +P + +C
Sbjct: 185 KLVDIDLKPSVPSEDVTC 202
>gi|300708060|ref|XP_002996218.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
gi|239605499|gb|EEQ82547.1| hypothetical protein NCER_100724 [Nosema ceranae BRL01]
Length = 196
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 112/157 (71%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+V+LG GKSSLVL++ K +F +ESTIGA+F ++T+ DA VKFEIWDTAGQER
Sbjct: 13 KMVVLGYYSVGKSSLVLKYAKNEFNPNEESTIGASFITKTMTTKDACVKFEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y+SL PMYYRGA +IVYDIT++ SF+ AK+WV+EL+ + + + L NK DL + R
Sbjct: 73 YNSLIPMYYRGAQIGLIVYDITSRESFDVAKRWVEELKFEKTKDFLKVLVANKIDLNEDR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA 168
KVT EE + YA + L F+E SAK TNV+ IF +A
Sbjct: 133 KVTFEEGRDYAIQQNLLFVEASAKDGTNVSKIFELVA 169
>gi|115463295|ref|NP_001055247.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|54291745|gb|AAV32114.1| unknown protein [Oryza sativa Japonica Group]
gi|113578798|dbj|BAF17161.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|215767010|dbj|BAG99238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631179|gb|EEE63311.1| hypothetical protein OsJ_18122 [Oryza sativa Japonica Group]
Length = 212
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 127/201 (63%), Gaps = 8/201 (3%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
+++ KLVLLGD GK+SLVLR+V F + QE+T+ A++ ++ L V + IWDTA
Sbjct: 12 SVSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTA 71
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
GQE++H+L P+YYR A AA++VYDIT+ +F R KWV+EL+ N ++VMA+A NK+DL
Sbjct: 72 GQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDL 131
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR--------VQPAPN 179
+ ++ + EA +YA+ G TSAK T ++DIF +IAKRL + A
Sbjct: 132 VRSKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLERRKNSSDGLSLAHP 191
Query: 180 PSGMVLMDRPGERTASASCCS 200
G++++D E+ CCS
Sbjct: 192 KKGILIVDDEPEKEPPPKCCS 212
>gi|348577329|ref|XP_003474437.1| PREDICTED: ras-related protein Rab-17-like [Cavia porcellus]
Length = 212
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 129/198 (65%), Gaps = 12/198 (6%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
+KLVLLG GKSSLVLR+VKG F T+G AFF++ +AV + +K EIWDTAGQE
Sbjct: 18 SKLVLLGSGSVGKSSLVLRYVKGDFKSVL-PTVGCAFFTKVVAVGNVALKLEIWDTAGQE 76
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLD 129
+YHS+ +Y+RGA A++VYD+T + SF RA++W+++L+ + P +V+AL GNK DL +
Sbjct: 77 KYHSVCHLYFRGAQVAMLVYDVTRKESFLRAQQWLEDLEKELQPGEIVVALVGNKTDLEE 136
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-----PRVQPAP--NPSG 182
R+VT +E + +A+ GL FMETSA+ V++IF +A+ L R+ +P N
Sbjct: 137 KRQVTLQEGKEFAESRGLLFMETSARLNHQVSEIFSAVAQELLQRDMARLGSSPLGNSGA 196
Query: 183 MVLMDRPGERTASASCCS 200
M L P RT CCS
Sbjct: 197 MRLNQAPTRRT---KCCS 211
>gi|396493770|ref|XP_003844142.1| hypothetical protein LEMA_P017930.1 [Leptosphaeria maculans JN3]
gi|312220722|emb|CBY00663.1| hypothetical protein LEMA_P017930.1 [Leptosphaeria maculans JN3]
Length = 387
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 114/189 (60%), Gaps = 28/189 (14%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLV+RFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 159 KLVLLGEAAVGKSSLVMRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 218
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA- 130
+ SLAPMYYR A AA++VYDIT +S +A+ WV EL Q +P +V+AL GNK+DL A
Sbjct: 219 FASLAPMYYRNAQAALVVYDITKPSSLTKAQHWVAELHRQASPGIVIALVGNKSDLATAA 278
Query: 131 ---------------------------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDI 163
R+V A+ A+ YA E L F ETSAKT NV ++
Sbjct: 279 GEESSEDADAAPAAEGEEEAAEDGADARRVPAKTAKTYADEESLLFFETSAKTGQNVAEV 338
Query: 164 FYEIAKRLP 172
F IA +P
Sbjct: 339 FTAIANAIP 347
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 5/193 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GK++++ +F +G+F++ ++TIG F S+ + ++D T+K +IWDTAGQER
Sbjct: 13 KLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+I+YDIT +FE KW++EL+ +P++ + + GNK D R
Sbjct: 73 YRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQKHIR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR----VQPAPNPSGMVLMD 187
+V + A AYAQ NG+ F+ETSAK TNV D F I +++ + V+P P P+ V+ D
Sbjct: 133 QVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTKFVVAD 192
Query: 188 RPGER-TASASCC 199
+ S+ CC
Sbjct: 193 TDVVKPEKSSGCC 205
>gi|448083219|ref|XP_004195336.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
gi|359376758|emb|CCE87340.1| Piso0_005889 [Millerozyma farinosa CBS 7064]
Length = 223
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 126/206 (61%), Gaps = 18/206 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +Q++ + ATVKFEIWDTAGQ
Sbjct: 18 KLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQSVKLPEKSATVKFEIWDTAGQ 77
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDIT+++SF RA++W++EL+ Q N+ + L GNK D+ +
Sbjct: 78 ERYKSLAPMYYRNANAALCVYDITSRSSFNRAQEWIKELKKQAPENITICLVGNKTDMQE 137
Query: 130 ARKVTAEEAQAYA---QENG--LFFMETSAKTATNVNDIFYEIAKRLP-----------R 173
R+V EE Y Q G L E SAK+ V +IF IA LP R
Sbjct: 138 EREVNQEEVDEYITQLQNEGTTLISGECSAKSGDGVLEIFTNIANALPVEEVINNSPRNR 197
Query: 174 VQPAPNPSGMVLMDRPGERTASASCC 199
+ +G+ L P + A+ CC
Sbjct: 198 SLGSRRSAGVDLGRAPSQNQANTGCC 223
>gi|125551885|gb|EAY97594.1| hypothetical protein OsI_19520 [Oryza sativa Indica Group]
Length = 210
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 129/203 (63%), Gaps = 12/203 (5%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
+++ KLVLLGD GK+SLVLR+V F + QE+T+ A++ ++ L V + IWDTA
Sbjct: 10 SVSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTA 69
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
GQE++H+L P+YYR A AA++VYDIT+ +F R KWV+EL+ N ++VMA+A NK+DL
Sbjct: 70 GQEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDL 129
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS------ 181
+ ++ + EA +YA+ G TSAK T ++DIF +IAKRL ++ N S
Sbjct: 130 VRSKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRL--LEKRKNSSDGLSLA 187
Query: 182 ----GMVLMDRPGERTASASCCS 200
G++++D E+ CCS
Sbjct: 188 HPKKGILIVDDEPEKEPPPKCCS 210
>gi|440493794|gb|ELQ76220.1| GTPase Rab5/YPT51, small G protein superfamily GTPase
[Trachipleistophora hominis]
Length = 198
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 115/168 (68%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSSL+ ++VK +F +ESTIGAAF ++T + +K+EIWDT
Sbjct: 9 KEYTYKMVVLGYYSVGKSSLIQKYVKDEFNPNEESTIGAAFLTKTSIYPNYNIKYEIWDT 68
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+I+YDIT SFE AK WV EL ++ N V L GNK+D
Sbjct: 69 AGQERYNSLIPMYYRGAHVALIMYDITCPESFETAKNWVTELSSEKPKNFVKVLIGNKSD 128
Query: 127 LLD-ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
L + +RKV EEA+ YA+ N + F E SAKT NV +IF +++ LP+
Sbjct: 129 LENTSRKVDFEEAKEYARRNKMLFFEASAKTGFNVENIFSSVSEMLPK 176
>gi|150951304|ref|XP_001387608.2| GTP-binding protein of the rab/ypt family [Scheffersomyces stipitis
CBS 6054]
gi|149388482|gb|EAZ63585.2| GTP-binding protein of the rab/ypt family, partial [Scheffersomyces
stipitis CBS 6054]
Length = 212
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 122/174 (70%), Gaps = 7/174 (4%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA--TVKFEI 63
NK KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +QT+ + ++ T+KFEI
Sbjct: 2 NKFAQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTINLPESKTTIKFEI 61
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERY SLAPMYYR A AA+ VYDIT+++SF +A+ W++EL+ Q +V+AL GN
Sbjct: 62 WDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFGKAQDWIKELKKQAPEGIVIALVGN 121
Query: 124 KADLLDARKVTAEEAQAYAQE-----NGLFFMETSAKTATNVNDIFYEIAKRLP 172
K+DL ++R+V + E + Y Q+ N + + SAK+ V +IF +I + LP
Sbjct: 122 KSDLEESREVDSAEVEEYVQQANEDGNTIIISDCSAKSGQGVLEIFTQIGRALP 175
>gi|66811300|ref|XP_639358.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996983|sp|Q54RX9.1|RAB5B_DICDI RecName: Full=Putative ras-related protein Rab-5B
gi|60467992|gb|EAL66003.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 116/162 (71%), Gaps = 5/162 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG++ GK+ + R V+ +F +STIGAAF +++ V++ +K EIWDTAGQER
Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQER 109
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SL PMYYRGAAAA++VYDIT + +FE K+WV ELQ +PN+++ALAGNK DL + R
Sbjct: 110 YRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDLPN-R 168
Query: 132 KVTAEEAQAYAQE--NGLFFMETSAKTATNVNDIFYEIAKRL 171
+V +E Y E N +FF ETSA + N+N++F EI +RL
Sbjct: 169 EVQVDEVNRYISELGNAIFF-ETSAASGQNINELFTEICRRL 209
>gi|407855996|gb|EKG06725.1| ras-related protein rab-5, putative [Trypanosoma cruzi]
Length = 200
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 129/190 (67%), Gaps = 3/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD G GKSSLV R K ++ E Q ST+GA+FF + V+D V F+IWDTAGQER
Sbjct: 12 KVVLLGDSGVGKSSLVQRLAKDEWNENQNSTVGASFFRYSCPVDDTAVNFDIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLA MYYRGAAAA++VY++ +FERAK WV+EL A +P ++ L GNK+DL + R
Sbjct: 72 YKSLASMYYRGAAAALVVYELPLYETFERAKYWVRELAAN-SPETIITLVGNKSDLANRR 130
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL--PRVQPAPNPSGMVLMDRP 189
V+AEEA AYA+E L F+E SAK + V DIF +IA+RL Q G++ +P
Sbjct: 131 NVSAEEAAAYAKELDLMFIEASAKDGSRVRDIFEKIARRLVAANSQNTVRDGGVIGGRQP 190
Query: 190 GERTASASCC 199
G+++ CC
Sbjct: 191 GKKSRQLGCC 200
>gi|330791941|ref|XP_003284049.1| Rab GTPase [Dictyostelium purpureum]
gi|325085978|gb|EGC39375.1| Rab GTPase [Dictyostelium purpureum]
Length = 209
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 116/162 (71%), Gaps = 5/162 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG++ GK+ + R V+ +F +STIGAAF +++ V++ +K EIWDTAGQER
Sbjct: 46 KLVLLGEMNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQER 104
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SL PMYYRGAAAA++VYDIT + +FE K+WV ELQ +PN+++ALAGNK DL + R
Sbjct: 105 YRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDLPN-R 163
Query: 132 KVTAEEAQAYAQE--NGLFFMETSAKTATNVNDIFYEIAKRL 171
+V +E Y E N +FF ETSA + N+N++F EI +RL
Sbjct: 164 EVPVDEVNRYISELGNAIFF-ETSAASGQNINELFIEICRRL 204
>gi|320168533|gb|EFW45432.1| GTP-binding protein rab11 [Capsaspora owczarzaki ATCC 30864]
Length = 243
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 120/175 (68%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
G + + AK+V+LG G GK+SLVLR+V+G + STIGA+F ++ + V+ V+ +IW
Sbjct: 24 GGRALEAKVVILGSQGVGKTSLVLRYVQGTYAADITSTIGASFMTRKMTVDRCQVRMQIW 83
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ S+APMYYRGA AA++VYDIT++ +F+ K WV+ELQ + ++V+ L GNK
Sbjct: 84 DTAGQERFRSMAPMYYRGANAALLVYDITDEQTFDDIKSWVKELQHNVDSDIVLVLVGNK 143
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
+D+ RKV+ E A YA+E F ETSAK + ++D F A+ + +++ +
Sbjct: 144 SDMASQRKVSGETAAIYAEEINALFFETSAKADSGISDAFLHAAREMIKLRTGSD 198
>gi|403369295|gb|EJY84490.1| hypothetical protein OXYTRI_17664 [Oxytricha trifallax]
Length = 221
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 126/190 (66%), Gaps = 5/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLGD+G GK+ + +R+ G+F E+TIG F ++ ++D VK+EIWDTAGQER
Sbjct: 32 KLVLLGDMGVGKTCISIRYAYGKFSSTHEATIGGCFLTKDEELDDHIVKYEIWDTAGQER 91
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLA MYY+ A AA +V+D+T++ SFE+ +KWV+EL + ++++ + GNK D LD+
Sbjct: 92 YHSLAQMYYKNAIAACVVFDVTSKESFEKCQKWVEELNQKAQADIIITIIGNKID-LDSH 150
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD---R 188
++T E+A+AY ++ GL + E SAK V+ +F +IAKRLP ++ L+D
Sbjct: 151 QITREQAEAYCKQMGLQYYEVSAKQNQGVDKVFKDIAKRLP-LESTNKKQKKQLLDPKKD 209
Query: 189 PGERTASASC 198
P + +SC
Sbjct: 210 PNSKQYQSSC 219
>gi|340905351|gb|EGS17719.1| vacuolar protein sorting-associated protein 21-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 242
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 120/190 (63%), Gaps = 29/190 (15%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 14 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T +S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 74 FASLAPMYYRNAQAALVVYDLTKPSSLIKAKHWVAELQRQASPGIVIALVGNKLDLTNDG 133
Query: 129 --------------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVND 162
DARK++ EEA+AYA+E GL F ETSAKT NVN+
Sbjct: 134 GAGGAGVGDQAGEDDAAAAGGEEESGDARKISTEEAKAYAEEEGLLFFETSAKTGYNVNE 193
Query: 163 IFYEIAKRLP 172
+F IA +P
Sbjct: 194 VFTAIALAIP 203
>gi|342185577|emb|CCC95061.1| putative small GTP-binding protein Rab5b [Trypanosoma congolense
IL3000]
Length = 207
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 113/165 (68%), Gaps = 6/165 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD G GKSSLV R K ++ E Q ST+GA+F +V D TV F+IWDTAGQER
Sbjct: 14 KIVLLGDSGVGKSSLVQRLAKNEWCENQNSTVGASFLRYVCSVGDTTVNFDIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLA MYYRGAAAA++VY+I + +FERAK WV+EL A +P ++ L GNK+DL +
Sbjct: 74 YKSLASMYYRGAAAALVVYEIPSWETFERAKHWVRELAAN-SPETIVILVGNKSDLRGSG 132
Query: 132 K-----VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
V+ +EA YA+E L F E SAK + V ++F +IA+RL
Sbjct: 133 SATMGCVSTDEASTYARELNLLFSEASAKDGSGVREVFTQIAQRL 177
>gi|429966400|gb|ELA48397.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 198
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 115/168 (68%), Gaps = 1/168 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K K+V+LG GKSSL+ ++VK +F +ESTIGAAF ++T + +K+EIWDT
Sbjct: 9 KEYTYKMVVLGYYSVGKSSLIQKYVKDEFNPNEESTIGAAFLTKTSIYPNYNIKYEIWDT 68
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY+SL PMYYRGA A+IVYDIT SFE AK WV EL ++ N V L GNK+D
Sbjct: 69 AGQERYNSLIPMYYRGAHVALIVYDITCPESFETAKNWVTELSSEKPKNFVKVLIGNKSD 128
Query: 127 LLD-ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
L + +RKV +EA+ YA+ N + F E SAKT NV ++F +++ LP+
Sbjct: 129 LENTSRKVGFDEAKEYARRNKMLFFEASAKTGFNVENVFSSVSEMLPK 176
>gi|71665955|ref|XP_819942.1| ras-related protein rab-5 [Trypanosoma cruzi strain CL Brener]
gi|58198651|gb|AAW65974.1| Rab GTPase protein 5 [Trypanosoma cruzi]
gi|70885265|gb|EAN98091.1| ras-related protein rab-5, putative [Trypanosoma cruzi]
Length = 226
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 122/179 (68%), Gaps = 12/179 (6%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT------ 58
G + AK+VLLG+ GKSS+ LRF + +F QE+T+GAAF S+T++V +++
Sbjct: 10 GCETATAKIVLLGESAVGKSSIALRFARNEFCPNQETTVGAAFLSRTVSVPNSSSSTQDS 69
Query: 59 -----VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
VK+EIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++EL+A +
Sbjct: 70 TAFGAVKYEIWDTAGQERYRSLAPIYYRGACGALVVYDITSVDSLKKAQTWLRELRANAD 129
Query: 114 PNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRL 171
P + + L GNK DL R+V+ E+ +A AQE G+ F ETSAK N+ +F E+A+ L
Sbjct: 130 PTLAIFLLGNKKDLESLRQVSHEDGKALAQEEGVNGFFETSAKENENIELVFVELARTL 188
>gi|340057867|emb|CCC52218.1| ras-related protein rab-5 [Trypanosoma vivax Y486]
Length = 227
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 121/186 (65%), Gaps = 15/186 (8%)
Query: 1 MATTGNKN-INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV----- 54
M G K+ I AK VLLG+ GKSS+ LRF + +F QE+TIGAAF S+ + V
Sbjct: 4 MTALGKKDVITAKTVLLGESAVGKSSIALRFARNEFSLNQETTIGAAFLSRNVTVPPPAQ 63
Query: 55 --------NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQ 106
N TVKFEIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++
Sbjct: 64 SSDSQGVANGGTVKFEIWDTAGQERYRSLAPIYYRGACGALVVYDITSADSLKKAQTWIR 123
Query: 107 ELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFY 165
EL+A +P +V+ L GNK DL R+V+ ++ A AQE G+ F E SAK NV ++F
Sbjct: 124 ELRANADPTLVIVLVGNKKDLEALRQVSHDDGAALAQEEGVNGFFEVSAKDNYNVEEVFS 183
Query: 166 EIAKRL 171
+A++L
Sbjct: 184 TLARQL 189
>gi|71031448|ref|XP_765366.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352322|gb|EAN33083.1| GTP-binding protein rab6, putative [Theileria parva]
Length = 222
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 124/197 (62%), Gaps = 2/197 (1%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T N K+VLLG+ AGK+S+V RFV +I +TIG F S+ + VN T++ ++
Sbjct: 8 TSVSNQRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQKTMRLQL 67
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQER+ SL P Y R +++AI+VYDITN+ SF+R ++W+++++ V+ + GN
Sbjct: 68 WDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVVVGN 127
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPNPSG 182
K DLLD R V+ EE Q+ A E FF ETSAK NV ++F +A L + ++P P
Sbjct: 128 KTDLLDKRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATELLKTIEPEPVSDK 187
Query: 183 MVLMD-RPGERTASASC 198
+V +D +P + S SC
Sbjct: 188 LVDIDLKPSAPSESTSC 204
>gi|84994386|ref|XP_951915.1| small GTP-binding protein, Rab family [Theileria annulata strain
Ankara]
gi|65302076|emb|CAI74183.1| small GTP-binding protein, Rab family, putative [Theileria
annulata]
Length = 222
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 124/197 (62%), Gaps = 2/197 (1%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T N K+VLLG+ AGK+S+V RFV +I +TIG F S+ + VN T++ ++
Sbjct: 8 TSVSNQRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQKTMRLQL 67
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQER+ SL P Y R +++AI+VYDITN+ SF+R ++W+++++ V+ + GN
Sbjct: 68 WDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVVVGN 127
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPNPSG 182
K DLLD R V+ EE Q+ A E FF ETSAK NV ++F +A L + ++P P
Sbjct: 128 KTDLLDKRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATELLKTIEPEPVSDK 187
Query: 183 MVLMD-RPGERTASASC 198
+V +D +P + S SC
Sbjct: 188 LVDIDLKPSAPSESTSC 204
>gi|401623893|gb|EJS41973.1| ypt53p [Saccharomyces arboricola H-6]
Length = 220
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 116/176 (65%), Gaps = 6/176 (3%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ K+V LG+ GKSS+VLRFV F E +E TIGAAF ++ + T+KFEIWDTAG
Sbjct: 11 LTIKVVFLGESAVGKSSIVLRFVSDDFTESREPTIGAAFLTKRTTRDGNTIKFEIWDTAG 70
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QER+ LAPMYYR A AA++V+DITN+ SF +A+ WV+EL + ++V+AL NK DLL
Sbjct: 71 QERFAPLAPMYYRNAQAAVVVFDITNEHSFHKAEDWVKELHEKAGNDIVIALVANKMDLL 130
Query: 129 DAR------KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP 178
+ + V EE ++ Q GL + + SAKT N+++IF + +++P + +P
Sbjct: 131 NVQGTILDEAVNEEEVDSFCQREGLLYFKASAKTGENIHEIFQTVGEKIPYSKQSP 186
>gi|294949590|ref|XP_002786273.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
gi|239900430|gb|EER18069.1| Rab5B protein, putative [Perkinsus marinus ATCC 50983]
Length = 217
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQT--LAVNDATVKFEIWD 65
I +K+VLLGD G GKSS+ LRF +G+F F E TIGAAF Q L ++ +K IWD
Sbjct: 32 GIESKIVLLGDSGVGKSSMALRFCQGRFPPFHEVTIGAAFLQQIVRLPSSNTQLKLHIWD 91
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
T GQER+ ++AP+YYR AA A++VYD+ ++ SFE K WV EL+++G P++ +A+AGNKA
Sbjct: 92 TGGQERFRAMAPLYYRDAAGAVVVYDVGSKESFESVKFWVSELRSKGPPDVRIAVAGNKA 151
Query: 126 DLLDARK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
DL ++ + VT +EA+ + QENGL TSA T N+ +F +A+ +
Sbjct: 152 DLPESDQVVTTQEAEEFCQENGLLCFRTSAMTGANIGKLFEAVAEEV 198
>gi|281208030|gb|EFA82208.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 230
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQ 69
KLVLLG+V GK+ + R V+ + I + TIGAAF + + + + T VK EIWDTAGQ
Sbjct: 40 VKLVLLGEVFTGKTCIASRLVRNE-IGPTDPTIGAAFLVKNMVLENGTNVKLEIWDTAGQ 98
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SL PMYYRGA+AA+IVYDIT + +FE K+WV ELQ Q +PN++MA AGNK DL +
Sbjct: 99 ERYRSLTPMYYRGASAAVIVYDITKKNTFETLKRWVSELQKQASPNLIMAFAGNKVDLPN 158
Query: 130 ARKVTAEEAQAYAQENG--LFFMETSAKTATNVNDIFYEIAKRLPRVQP 176
R+V +E Y E G + F ETSA+T NV ++F EI +++ ++P
Sbjct: 159 -REVQVDEVSKYISELGGDIIFFETSAQTGYNVTELFNEICRKIKELEP 206
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 123/203 (60%), Gaps = 16/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
VT E+A A+A+ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDVGDDPAALPK 194
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + G+ SA CCS
Sbjct: 195 GQTIT--VGKDDVSAVKKVGCCS 215
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V +E+A+A+A+ FFMETSA A NV D F E+ ++ RV PA P
Sbjct: 134 AVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKALDIGDDPAAPPK 193
Query: 182 GMVLMDRPGERTAS---ASCCS 200
G + + ++ ++CCS
Sbjct: 194 GKTISVGSKDDVSAVKKSACCS 215
>gi|407407389|gb|EKF31210.1| ras-related protein rab-5, putative [Trypanosoma cruzi marinkellei]
Length = 226
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 121/179 (67%), Gaps = 12/179 (6%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT------ 58
G + AK+VLLG+ GKSS+ LRF + +F QE+T+GAAF S+T+ V +++
Sbjct: 10 GCETATAKIVLLGESAVGKSSIALRFARNEFCPNQETTVGAAFLSRTVNVPNSSSSTQDS 69
Query: 59 -----VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
VK+EIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++EL+A +
Sbjct: 70 TACGAVKYEIWDTAGQERYRSLAPIYYRGACGALVVYDITSVDSLKKAQTWLRELRANAD 129
Query: 114 PNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRL 171
P + + L GNK DL R+V+ E+ +A AQE G+ F ETSAK N+ +F E+A+ L
Sbjct: 130 PTLAIFLLGNKKDLESLRQVSHEDGKALAQEEGVNGFFETSAKENENIELVFVELARTL 188
>gi|408397097|gb|EKJ76247.1| hypothetical protein FPSE_03502 [Fusarium pseudograminearum CS3096]
Length = 234
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 116/181 (64%), Gaps = 18/181 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTGDS 134
Query: 129 ---------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
DARKV EEAQAYA+E L F ETSAK+ NV ++F IA +P
Sbjct: 135 SSAAGADGEEGDDSGDARKVPTEEAQAYAEEESLLFFETSAKSGHNVTEVFTAIANAIPE 194
Query: 174 V 174
Sbjct: 195 T 195
>gi|46122247|ref|XP_385677.1| hypothetical protein FG05501.1 [Gibberella zeae PH-1]
Length = 234
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 116/179 (64%), Gaps = 18/179 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTGDS 134
Query: 129 ---------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
DARKV EEAQAYA+E L F ETSAK+ NV ++F IA +P
Sbjct: 135 SSVAGADGEEGDDSGDARKVPTEEAQAYAEEESLLFFETSAKSGHNVTEVFTAIANAIP 193
>gi|407846705|gb|EKG02711.1| small G-protein, putative [Trypanosoma cruzi]
Length = 226
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 122/179 (68%), Gaps = 12/179 (6%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT------ 58
G + AK+VLLG+ GKSS+ LRF + +F QE+T+GAAF S+T++V +++
Sbjct: 10 GCETATAKIVLLGESAVGKSSIALRFARNEFCPNQETTVGAAFLSRTVSVPNSSSSTQDS 69
Query: 59 -----VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
VK+EIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++EL+A +
Sbjct: 70 TAFGAVKYEIWDTAGQERYRSLAPIYYRGACGALVVYDITSVDSLKKAQTWLRELRANAD 129
Query: 114 PNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRL 171
P + + L GNK DL R+V+ ++ +A AQE G+ F ETSAK N+ +F E+A+ L
Sbjct: 130 PTLAIFLLGNKKDLESLRQVSHDDGKALAQEEGVNGFFETSAKENENIELVFVELARTL 188
>gi|71414729|ref|XP_809457.1| ras-related protein rab-5 [Trypanosoma cruzi strain CL Brener]
gi|70873840|gb|EAN87606.1| ras-related protein rab-5, putative, partial [Trypanosoma cruzi]
Length = 188
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 122/178 (68%), Gaps = 11/178 (6%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT------ 58
G + AK+VLLG+ GKSS+ LRF + +F QE+T+GAAF S+T++V +++
Sbjct: 10 GCETATAKIVLLGESAVGKSSIALRFARNEFCPNQETTVGAAFLSRTVSVPNSSSTQDST 69
Query: 59 ----VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP 114
VK+EIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++EL+A +P
Sbjct: 70 AFGAVKYEIWDTAGQERYRSLAPIYYRGACGALVVYDITSVDSLKKAQTWLRELRANADP 129
Query: 115 NMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRL 171
+ + L GNK DL R+V+ E+ +A AQE G+ F ETSAK N+ +F E+A+ L
Sbjct: 130 TLAIFLLGNKKDLESLRQVSHEDGKALAQEEGVNGFFETSAKENENIELVFVELARTL 187
>gi|18266415|gb|AAL67567.1|AF461434_1 small GTP binding protein rab6 [Babesia gibsoni]
Length = 227
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 121/190 (63%), Gaps = 1/190 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG+ GK+S+V RFV F++ +TIG F S+ + VN T++ ++WDTAGQER
Sbjct: 22 KIVLLGEQSTGKTSIVTRFVYDHFVQQYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +L P Y R ++AAI+VYDITN+ SFER K+WV++++ ++ + GNK DLLD R
Sbjct: 82 FRTLMPSYIRDSSAAIVVYDITNRESFERVKEWVKDIKELRGDKAIIVIVGNKTDLLDKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPNPSGMVLMDRPG 190
KV+ +E + A + F ETSAK N+ND+F +A L + ++P P +V +D G
Sbjct: 142 KVSYDEGEEEAGKLECLFCETSAKNGDNINDLFNTMATELLKNLEPVPVNDKLVDIDLKG 201
Query: 191 ERTASASCCS 200
+ S CS
Sbjct: 202 SSNDTPSNCS 211
>gi|340058625|emb|CCC52985.1| putative small GTP-binding protein Rab5b [Trypanosoma vivax Y486]
Length = 211
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 126/204 (61%), Gaps = 20/204 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG+ G GK+SLV R K ++ E Q ST+GA+FF + D V F+IWDTAGQER
Sbjct: 13 KVVLLGESGVGKTSLVQRLAKNEWCENQNSTVGASFFRYACPLGDTAVHFDIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA- 130
Y SLA MYYRGAAAA++VY+I + +FERAK WV+EL A +P ++ L GNK+D+ DA
Sbjct: 73 YKSLASMYYRGAAAALVVYEIPSYETFERAKYWVRELAAN-SPETIVYLVGNKSDIRDAS 131
Query: 131 ---------RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS 181
R V ++E AYA+E + F E SA+ T VN +F +IAK+L A N
Sbjct: 132 AGTEEGNSRRFVCSQEVAAYARECNMMFSEASARNGTGVNGVFAQIAKQL----VAANSD 187
Query: 182 -----GMVLMDRPGERTASASCCS 200
G VL + G + + CC+
Sbjct: 188 NIVREGGVLGTQAGSQPVRSRCCA 211
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA A NV D F E+ ++ RV PA P
Sbjct: 134 AVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTAS---ASCCS 200
G + + ++ A CCS
Sbjct: 194 GQTINVGSKDDVSAVKKAGCCS 215
>gi|260949137|ref|XP_002618865.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC 42720]
gi|238846437|gb|EEQ35901.1| hypothetical protein CLUG_00024 [Clavispora lusitaniae ATCC 42720]
Length = 221
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 122/184 (66%), Gaps = 12/184 (6%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA--T 58
+A + + + KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +QT+ + +A T
Sbjct: 8 VAMSETRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQTINLPEANTT 67
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
VKFEIWDTAGQERY SLAPMYYR A AA+ VYDIT+++SF +A+ W++EL+ Q +V+
Sbjct: 68 VKFEIWDTAGQERYKSLAPMYYRNANAALCVYDITSRSSFNKAQDWIEELKKQAPEGIVV 127
Query: 119 ALAGNKADLLDARKVTAEEAQAY--------AQENG--LFFMETSAKTATNVNDIFYEIA 168
AL GNKADL R+V E Y A E G + ME SAK+ V ++F IA
Sbjct: 128 ALVGNKADLSHEREVDESEIVEYIERLKQESAAEGGREIIHMECSAKSGDGVLEVFDAIA 187
Query: 169 KRLP 172
+ LP
Sbjct: 188 RALP 191
>gi|389639440|ref|XP_003717353.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
70-15]
gi|351643172|gb|EHA51034.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
70-15]
gi|440465364|gb|ELQ34687.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
Y34]
gi|440490989|gb|ELQ70478.1| vacuolar protein sorting-associated protein 21 [Magnaporthe oryzae
P131]
Length = 238
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 118/187 (63%), Gaps = 24/187 (12%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQ
Sbjct: 11 SVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPARTIKFEIWDTAGQ 70
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL- 128
ER+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 71 ERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTS 130
Query: 129 -----------------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY 165
DARK+ EEA+AYA+E GL F ETSAKT NV ++F
Sbjct: 131 DGGDASGGGDDDGDAEGAGDDSGDARKIPTEEAKAYAEEEGLLFFETSAKTGFNVTEVFT 190
Query: 166 EIAKRLP 172
IA +P
Sbjct: 191 AIANAIP 197
>gi|70999656|ref|XP_754545.1| RAB GTPase Vps21/Ypt51 [Aspergillus fumigatus Af293]
gi|66852182|gb|EAL92507.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus fumigatus Af293]
gi|159127558|gb|EDP52673.1| RAB GTPase Vps21/Ypt51, putative [Aspergillus fumigatus A1163]
Length = 262
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 117/200 (58%), Gaps = 39/200 (19%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q ++ T+KFEIWDTAGQER
Sbjct: 17 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPTRTIKFEIWDTAGQER 76
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL--- 128
+ SLAPMYYR A AA++VYD+T +S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 77 FASLAPMYYRNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPGIVIALVGNKLDLTSDD 136
Query: 129 ------------------------------------DARKVTAEEAQAYAQENGLFFMET 152
DARKV+ EA YA+E L F ET
Sbjct: 137 GEAAEQPQANDERESSGVEGEDATGDNHEEQEATPGDARKVSTREASEYAEEESLLFFET 196
Query: 153 SAKTATNVNDIFYEIAKRLP 172
SAKT TNV ++F IA +P
Sbjct: 197 SAKTGTNVAEVFTAIANAIP 216
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 124/203 (61%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+VM L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V E+A+A+A+ FFMETSA A NV D F E+ ++ RV PA P
Sbjct: 134 AVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + + G+ SA +CCS
Sbjct: 194 GHTI-NVGGKDDVSAVKKSACCS 215
>gi|342877497|gb|EGU78949.1| hypothetical protein FOXB_10549 [Fusarium oxysporum Fo5176]
Length = 235
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 116/180 (64%), Gaps = 19/180 (10%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFV F E +E TIGAAF +Q + T+KFEIWDTAGQER
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+AL GNK DL
Sbjct: 75 FASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLDLTGDS 134
Query: 130 -----------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
ARKV EEAQAYA+E GL F ETSAK+ NV ++F IA +P
Sbjct: 135 GAAADGEDGEEGDDSGDARKVPTEEAQAYAEEEGLLFFETSAKSGHNVTEVFTAIANAIP 194
>gi|428182166|gb|EKX51028.1| hypothetical protein GUITHDRAFT_135041 [Guillardia theta CCMP2712]
Length = 210
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 113/162 (69%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
AK+V+LGD G GK+ LV RF++G+F+ STIGA+F + + V + +IWDTAGQ
Sbjct: 7 QAKVVVLGDTGVGKTCLVHRFIEGKFVPHGASTIGASFMVKKMNVGGMRLTMQIWDTAGQ 66
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ER+ S+APMYYRGA AAI+V D TN S+E+ + WV+EL+ + + +ALA NK DL++
Sbjct: 67 ERFRSMAPMYYRGAEAAILVLDCTNADSYEKVRSWVEELKRNASGEIFLALACNKCDLVE 126
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
R+V EEA+AYA+ G METSAK+ ++++F +AK L
Sbjct: 127 ERRVAQEEAEAYAKSIGAVCMETSAKSNKGIDELFGAVAKGL 168
>gi|388581691|gb|EIM21998.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 204
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
K +N KLVLLG+ GKSS+VLRFVK QF E +ESTIGAAF +Q + + + +KFEIWDT
Sbjct: 3 KPLNFKLVLLGESAVGKSSIVLRFVKQQFAEDRESTIGAAFLTQQMKIAEDLIKFEIWDT 62
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
AGQERY SLAPMYYR A AA++VY + ++ S +RA KW++EL+ Q + N ++ LAGNK+D
Sbjct: 63 AGQERYKSLAPMYYRYAHAALVVYSVGSKDSLDRAVKWIEELKRQADSNTIIILAGNKSD 122
Query: 127 LLD-ARKVTAEEAQAYAQENGLFFMET-SAKTATNVNDIFYEIAKRLPRVQPAPN 179
+ D ++V + + +E + + T SAK+ +N++F +I + LP +Q A +
Sbjct: 123 IPDNTKQVANSDVEKLCEELDVSYHATCSAKSGAGINELFLKIGQLLP-IQQAKD 176
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 125/203 (61%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V E+A+A+A+ FFMETSA A NV D F E+ ++ RV PA P
Sbjct: 134 AVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDDPAAPPK 193
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + + G+ SA +CCS
Sbjct: 194 GQTI-NVGGKDDVSAVKKSACCS 215
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 16/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
VT E+A+A+A+ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPK 194
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + G+ SA CCS
Sbjct: 195 GQTI--NVGKDDVSAVKKVGCCS 215
>gi|149239626|ref|XP_001525689.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451182|gb|EDK45438.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 234
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 115/171 (67%), Gaps = 10/171 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDATVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +Q++ + + TVKFEIWDTAGQ
Sbjct: 20 KLVLLGESAVGKSSIVHRFVKNTFDDMRESTIGAAFLTQSITIPETETTVKFEIWDTAGQ 79
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDIT+ +SF +A+ W+ EL+ Q +V+AL GNK DL +
Sbjct: 80 ERYKSLAPMYYRNANAALCVYDITSSSSFTKAQDWISELRKQAPEGIVIALVGNKTDLEE 139
Query: 130 ARKVTAEEAQAY--------AQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
R+V +E + Y A E + E SAK+ V +IF +IA+ LP
Sbjct: 140 EREVNQDEVEEYVTGLLNGGAPEAKIITAECSAKSGDGVIEIFDKIARALP 190
>gi|432877569|ref|XP_004073164.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 211
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 11 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 70
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 71 DTAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 130
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP + AP S
Sbjct: 131 TDLADKRQITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSAPEKSKED 190
Query: 185 LMD----RPGERTASASCCS 200
++D R E T + S CS
Sbjct: 191 MIDIKLERQPEMTVTESSCS 210
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 125/203 (61%), Gaps = 14/203 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F STIG F ++T+ V+D VK +IWDTAGQER
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T + +FE A++W++EL+ + N+V+ L GNKADL R
Sbjct: 81 YRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGNKADLRHLR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V AE+A+A+A+ +G F METSA ATNV F E+ ++ RV PA P
Sbjct: 141 AVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIGDDPAAPPR 200
Query: 182 GMVL----MDRPGERTASASCCS 200
G + D S+ CCS
Sbjct: 201 GRTIDVSAKDDAVTPVNSSGCCS 223
>gi|432898518|ref|XP_004076541.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 125/200 (62%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D T++ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R +AAA++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP + + + S
Sbjct: 128 TDLADKRQITTEEGEQRAKEMNVLFIETSAKTGYNVKQLFRRVAAALPGMDTSQDKSRED 187
Query: 185 LMD----RPGERTASASCCS 200
++D +P E+ AS CS
Sbjct: 188 MIDIKLEKPPEQPASEGSCS 207
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 122/204 (59%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
+T E+A A+AQ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPR 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R A CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKAGCCS 216
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 110/161 (68%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
+ K+V+LGD G GK+S++ RF F E ++T+GA+F + L D T KF+IWDTAGQ
Sbjct: 6 DIKVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWDTAGQ 65
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
E+Y SLAP+YYR AA+IVYDITN+ASF+ KKWVQEL+ G N+ +A+ GNK DL+D
Sbjct: 66 EKYRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQELREHGPANITIAVVGNKVDLID 125
Query: 130 ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
V +EA+ YA E F TSAK N+ +F +IA++
Sbjct: 126 REDVKYDEAKQYANELNAIFQYTSAKENQNIESLFIQIAEK 166
>gi|326432225|gb|EGD77795.1| Rab5c [Salpingoeca sp. ATCC 50818]
Length = 198
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 112/166 (67%), Gaps = 4/166 (2%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV-NDATVKFEIWDTAG 68
N KLVLLG G GKSSLVLRFV+ +F + E T+GAAF S+ + + N +K EIWDTAG
Sbjct: 6 NVKLVLLGASGVGKSSLVLRFVRDEFRDHHEITVGAAFLSKVVDLPNSRQIKLEIWDTAG 65
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNM---VMALAGNKA 125
QERY SLAPMYYRGA AI+V+DIT SF A++W++EL + + ++ L GNK
Sbjct: 66 QERYRSLAPMYYRGAQGAIVVFDITQHDSFASAREWIKELWSHTEEDKEKPLVVLVGNKV 125
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
D + R+V + QA+ Q N + +METSAKTA N + +F IA+ L
Sbjct: 126 DKSNERQVNPADVQAFTQANNITYMETSAKTAVNTSRVFEYIAEEL 171
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA + NV D F E+ ++ RV PA P
Sbjct: 134 AVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTAS---ASCCS 200
G + + ++ A CCS
Sbjct: 194 GQTINVGSKDDVSAVKKAGCCS 215
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 126/202 (62%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ LAGNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGNKSDLNHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVN--------DIFYEIAKRLPRVQPAPNPSGM 183
V+AE+AQ A++ GL F+ETSA A+NV DI+ I+K+ Q A N +G+
Sbjct: 134 SVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKALTAQEAANSTGL 193
Query: 184 -----VLMDRPGERTASASCCS 200
+ + +CCS
Sbjct: 194 PQGTTITIANLSSNINKRACCS 215
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K VL+GD G GKS+L++RF + +F +STIG F ++ + +++ +K +IWDTAGQER
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+IVYDIT Q+SF+ +W++EL+ + N+V+ L GNK DLL R
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGNKTDLLHLR 131
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAPNPS- 181
V+ EEAQA+A EN L F+ETSA A+NV + F + + R+ +PS
Sbjct: 132 AVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGGDEGAHPSA 191
Query: 182 GMVLMDRP-----GERTASASCC 199
G L P G+ +S CC
Sbjct: 192 GQTLNIAPTIGDSGKSKSSGQCC 214
>gi|3309109|gb|AAC78731.1| Trab5B [Trypanosoma brucei]
Length = 203
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 120/192 (62%), Gaps = 7/192 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD G GKSSLV R K ++ + Q ST F V D V F+IWDTAGQER
Sbjct: 14 KIVLLGDSGVGKSSLVQRLAKNEWCDNQNSTGRRVFLRYVCTVGDTAVNFDIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLA MYYRGAAAA++VY+I + +FERAK WV+EL A +P ++ L GNK+DL
Sbjct: 74 YKSLASMYYRGAAAALVVYEIPSWETFERAKHWVREL-ATNSPETIVILVGNKSDLRGTS 132
Query: 132 K-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN---PSGMVLMD 187
V++EEA YA+E L F E SAK + V+++F +IA+RL V N SG VL
Sbjct: 133 GCVSSEEAATYARELNLLFSEASAKDGSGVSEVFMQIAQRL--VASNNNNTVHSGGVLGG 190
Query: 188 RPGERTASASCC 199
+P S+ CC
Sbjct: 191 QPNSTRRSSGCC 202
>gi|327277372|ref|XP_003223439.1| PREDICTED: ras-related protein Rab-6A-like [Anolis carolinensis]
Length = 215
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D T++ ++W
Sbjct: 15 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R +AAA+IV+D+TN SF++ KW+ +++ + ++++ L GNK
Sbjct: 75 DTAGQERFRSLIPSYIRDSAAAVIVFDLTNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 134
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP + P S
Sbjct: 135 TDLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKDD 194
Query: 185 LMD----RPGERTASASCCS 200
++D +P E+ S S CS
Sbjct: 195 MIDIKLEKPPEQPVSESGCS 214
>gi|269866120|ref|XP_002652162.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
gi|220063041|gb|EED41895.1| GTPase SAR1 related small G protein [Enterocytozoon bieneusi H348]
Length = 165
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 106/144 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV+LG GKSS+VL F+K +F +ESTIGAAF ++T+ ++ VKFEIWDTAGQER
Sbjct: 13 KLVILGHYSVGKSSIVLNFIKNEFNPNEESTIGAAFLTKTVFIDGTAVKFEIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y+SL PMYYRGA AA++VYDIT+ SFERAK+W+++L+ + N + L GNK DL +A
Sbjct: 73 YYSLIPMYYRGANAALVVYDITSAESFERAKRWIEDLKTEKPDNFMKVLIGNKVDLSEAA 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAK 155
+T E + YA++ GL F +TS K
Sbjct: 133 VITEEMGKQYAEQEGLLFYQTSQK 156
>gi|71033037|ref|XP_766160.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353117|gb|EAN33877.1| GTP-binding protein rab5, putative [Theileria parva]
Length = 270
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 103/137 (75%), Gaps = 13/137 (9%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIG------------AAFFSQTLAVNDATV 59
KLV+LGD GKS LV RFVK F+EFQESTIG AAF +QT+ ++D V
Sbjct: 39 KLVILGDASVGKSCLVGRFVKNTFMEFQESTIGEVINYDFLITILAAFMTQTVKLDDCNV 98
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
KFEIWDTAGQERY +LAPMYYRG+AAAIIVYDIT + SF++AK W++EL++ PN+++A
Sbjct: 99 KFEIWDTAGQERYRTLAPMYYRGSAAAIIVYDITLKDSFDQAKSWIKELKSHVEPNIILA 158
Query: 120 LAGNKADLLDARKVTAE 136
LAGNKADL D RKV +
Sbjct: 159 LAGNKADLED-RKVDTD 174
>gi|403222371|dbj|BAM40503.1| small GTP binding protein rab6 [Theileria orientalis strain
Shintoku]
Length = 222
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 123/197 (62%), Gaps = 2/197 (1%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
T N K+VLLG+ AGK+S+V RFV +I +TIG F S+ + VN T++ ++
Sbjct: 8 TSVSNQRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQRTMRLQL 67
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQER+ SL P Y R +++AI+VYDITN+ SFER + W+++++ V+ + GN
Sbjct: 68 WDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFERTRNWIKDIKDMRGDKAVIVVVGN 127
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR-VQPAPNPSG 182
K DLLD R V+ EE ++ A+E FF ETSAK NV ++F +A L + ++P P
Sbjct: 128 KTDLLDKRTVSFEEGESLAKEMNCFFRETSAKNGDNVQELFTLVASELLKTIEPEPVNDR 187
Query: 183 MVLMD-RPGERTASASC 198
+V +D RP + + C
Sbjct: 188 LVDIDLRPSAPSENTGC 204
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 125/203 (61%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA A NV + F E+ ++ RV PA P
Sbjct: 134 AVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTAS----ASCCS 200
G + + G+ S A CCS
Sbjct: 194 GQTI-NVGGKDDVSAVKKAGCCS 215
>gi|123503467|ref|XP_001328522.1| Ras family protein [Trichomonas vaginalis G3]
gi|67944361|gb|AAY83816.1| small Rab GTPase Rab5b [Trichomonas vaginalis]
gi|121911466|gb|EAY16299.1| Ras family protein [Trichomonas vaginalis G3]
Length = 205
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 17/200 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG AGK+SLV RF +F+ ESTIGAAF ++++ +N+ VK EIWDT G E+
Sbjct: 11 KIVLLGAASAGKTSLVFRFAHDRFLPNSESTIGAAFVTKSVIINNNEVKLEIWDTGGSEK 70
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAPMYYR AAAAIIV+D+T + S + A W+ EL+ G + +ALA NK DL R
Sbjct: 71 YRSLAPMYYRDAAAAIIVFDVTTETSLDDAASWLDELKKNGPQEVFLALAANKTDLASIR 130
Query: 132 KVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPG 190
K+++E Q +A +NG+ ETSA T +NV +F ++ K++ + A NP+ + RP
Sbjct: 131 KISSETIQDFANKNGIKIVYETSALTGSNVIQLFEDVTKQVDKFM-AENPT----LKRPS 185
Query: 191 ER-----------TASASCC 199
+ T +SCC
Sbjct: 186 KEVLDLLQGDDTPTKKSSCC 205
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 124/204 (60%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +KW++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ ++A+A+A+ FFMETSA + NV++ F E+ ++ RV PA P
Sbjct: 135 AVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDDPAALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R + CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKSGCCS 216
>gi|167523210|ref|XP_001745942.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775743|gb|EDQ89366.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 118/194 (60%), Gaps = 3/194 (1%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ AK+VLLG GK+SLVLR+V F + STIGA+FF+ L V+ VK ++WDTAG
Sbjct: 1 MEAKIVLLGAQSVGKTSLVLRYVDDAFEDAVSSTIGASFFTHKLTVDGCRVKLQLWDTAG 60
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QER+ S+APMYYRG++AA+IVYD+T S + K W+ ELQ + + VM + NK DLL
Sbjct: 61 QERFRSMAPMYYRGSSAALIVYDVTTPKSLDEVKGWMAELQRNTDTSTVMCICANKVDLL 120
Query: 129 DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL---PRVQPAPNPSGMVL 185
E+ ++YA++ F ETSAKT +N+ F + + L R+ PA + + +
Sbjct: 121 KDDAHLVEKGRSYAKQTNAIFFETSAKTGAGINEAFMAVVRELISSKRLTPAADQADAIK 180
Query: 186 MDRPGERTASASCC 199
+ + + T CC
Sbjct: 181 LAQVSDNTEKKGCC 194
>gi|432853316|ref|XP_004067647.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ PS G
Sbjct: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESVQEPSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E + CS
Sbjct: 188 MIDIKLDKPQEPQTTEGSCS 207
>gi|146183318|ref|XP_001025858.2| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|146143634|gb|EAS05613.2| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777784|dbj|BAJ21288.1| Rab-family small GTPase Rab5A [Tetrahymena thermophila]
Length = 199
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 114/162 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+V+LG+ G GKSS+++RFVK +F Q +T+GAAF S+ + ND KF+IWDTAGQE+
Sbjct: 7 KVVILGNSGVGKSSIMMRFVKDEFSATQPTTMGAAFMSKIIKTNDNQFKFQIWDTAGQEK 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y SLAP+YYR A I+VYDIT+ ASF K W+ ELQ QG N+++A+ GNK+DL D +
Sbjct: 67 YKSLAPLYYREARIGIVVYDITSLASFGVLKTWITELQKQGPENLILAIVGNKSDLQDKQ 126
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 173
+V E+A +A++ F TSAK +ND+F ++A ++ +
Sbjct: 127 EVPYEDAMNFAKQVDALFELTSAKENRGINDLFMKLASKIEQ 168
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K VL+GD G GKS+L++RF + +F +STIG F ++ + +++ +K +IWDTAGQER
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+IVYDIT Q+SF+ +W++EL+ + N+V+ L GNK DLL R
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLR 131
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAPNPS- 181
V+ EEAQA+A EN L F+ETSA A+NV + F + + R+ +P+
Sbjct: 132 AVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPTA 191
Query: 182 GMVL-----MDRPGERTASASCC 199
G L M+ ++ +S+ CC
Sbjct: 192 GQTLNIAPTMNDLNKKKSSSQCC 214
>gi|430812572|emb|CCJ30031.1| unnamed protein product [Pneumocystis jirovecii]
Length = 193
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 4/138 (2%)
Query: 36 IEFQESTIGAAFFSQTLAVNDATV-KFEIW---DTAGQERYHSLAPMYYRGAAAAIIVYD 91
I+++ESTIGAAF +QTL +++ TV KFEIW DTAGQERY SLAPMYYR A AI+VYD
Sbjct: 2 IDYRESTIGAAFLTQTLCLDETTVIKFEIWLLRDTAGQERYRSLAPMYYRNADCAIVVYD 61
Query: 92 ITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFME 151
IT S ++AK WV+EL Q N+V+ALAGNKADL R V +AQAYA+E GL F E
Sbjct: 62 ITQTESLDKAKSWVKELHRQACGNIVIALAGNKADLASRRAVETSDAQAYAEEAGLIFFE 121
Query: 152 TSAKTATNVNDIFYEIAK 169
TSAK A NVN++F I K
Sbjct: 122 TSAKDAQNVNNLFQAIGK 139
>gi|410924265|ref|XP_003975602.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Takifugu
rubripes]
gi|225706442|gb|ACO09067.1| Ras-related protein Rab-6B [Osmerus mordax]
Length = 208
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--NPSG 182
DL + R++T EE + A+E + F+ETSAKT NV +F +A LP ++ NP G
Sbjct: 128 TDLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E T CS
Sbjct: 188 MIDIKLDKPAEPTVPEGGCS 207
>gi|50927456|gb|AAH78662.1| RAB6B protein [Homo sapiens]
Length = 208
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ LAGNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLAGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E AS CS
Sbjct: 188 MIDIKLDKPQEPPASEGGCS 207
>gi|358060564|dbj|GAA93714.1| hypothetical protein E5Q_00360 [Mixia osmundae IAM 14324]
Length = 252
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LGD AGK+SL+ +F+ G F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 58 KLVFLGDQNAGKTSLITQFMYGSFDATYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 117
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ A++VYDITN++SF KW+ +++A+ ++++ L GNK DL D R
Sbjct: 118 FRSLIPSYIRDSSVAVVVYDITNRSSFASTNKWIDDVRAERGSDVIIVLVGNKTDLNDKR 177
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-----QPAPNPSGMVLM 186
+VT EEA+ A++ G+ F+ETSAK NV +F +IA+ LP + Q A + +
Sbjct: 178 QVTTEEAEKRAKDLGVMFIETSAKAGHNVKTLFRKIAQALPGMDRDSEQAAGTNQMIDVT 237
Query: 187 DRPGERTASASCCS 200
+P + +S CS
Sbjct: 238 SKPSDAAPESSGCS 251
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA A NV F E+ ++ RV PA P
Sbjct: 134 AVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTAS----ASCCS 200
G + + G+ S A CCS
Sbjct: 194 GQTI-NVGGKDDVSAVKKAGCCS 215
>gi|432916105|ref|XP_004079294.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--NPSG 182
DL + R++T EE + A+E + F+ETSAKT +NV +F +A LP ++ NP G
Sbjct: 128 TDLEEKRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAALPGMESLDDANPEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E T CS
Sbjct: 188 MIDIKLDKPAEPTVPEGGCS 207
>gi|410897487|ref|XP_003962230.1| PREDICTED: ras-related protein Rab-17-like [Takifugu rubripes]
Length = 223
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 116/166 (69%), Gaps = 2/166 (1%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66
+ + K+VLLG G GKSSL LRFV+ +F T+G A+ + + + D +++FEIWDT
Sbjct: 22 RTLRVKMVLLGGSGVGKSSLALRFVRSEF-RSTVPTVGCAYMTHMIHLRDVSLRFEIWDT 80
Query: 67 AGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKA 125
AGQE+YHS+ P+YYRGA AA++VYDI+ + +F R + W+QEL+ P + VM L GNKA
Sbjct: 81 AGQEKYHSVTPLYYRGAHAALLVYDISKRETFYRVQLWLQELEKHYIPGSTVMWLIGNKA 140
Query: 126 DLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
DL AR+V+ +E + A + GL+F+ETSA + +V+++ ++A R+
Sbjct: 141 DLGHARQVSEQEGHSLAADRGLYFIETSALSGDHVDELLQDVAHRV 186
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 124/204 (60%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ ++A+A+A+ FFMETSA + NV++ F E+ ++ RV PA P
Sbjct: 135 AVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDDPAALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R + CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKSGCCS 216
>gi|145488631|ref|XP_001430319.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397416|emb|CAK62921.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 121/204 (59%), Gaps = 12/204 (5%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
N K+VLLGD G GKSS+VLRF F EST+GAAF ++T+ VN KF+IWDTA
Sbjct: 2 NREVKVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTA 61
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
GQE+Y SL P+YYR A A+IVYDIT++ SF+ K WV EL+A G ++ L GNK DL
Sbjct: 62 GQEKYKSLTPLYYREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDL 121
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-----------PRVQP 176
++ KV+ +EA YAQ+ G TS K + ++F IA+++ + +
Sbjct: 122 IEDEKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKLVEGKKTEK 181
Query: 177 APNPSGMVLM-DRPGERTASASCC 199
NPS V + D+ ++ CC
Sbjct: 182 PQNPSVKVTVEDQNKKKKKEGGCC 205
>gi|156717362|ref|NP_001096221.1| uncharacterized protein LOC100124772 [Xenopus (Silurana)
tropicalis]
gi|111309029|gb|AAI21384.1| LOC100124772 protein [Xenopus (Silurana) tropicalis]
Length = 210
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 10 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 69
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 70 DTAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 129
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP + P S
Sbjct: 130 TDLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKED 189
Query: 185 LMD----RPGERTASASCCS 200
++D +P E+ + S CS
Sbjct: 190 MIDIKLEKPPEQPVTESGCS 209
>gi|395536593|ref|XP_003770297.1| PREDICTED: ras-related protein Rab-17 [Sarcophilus harrisii]
Length = 385
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG GKSSLV+R +K F E T+G AFF+Q + ++++ +K EIWDTAGQE+
Sbjct: 193 KVVLLGSSSVGKSSLVIRLIKNDFKEIL-PTMGCAFFTQMMEIDNSALKLEIWDTAGQEK 251
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPN-MVMALAGNKADLLDA 130
YHS+ +Y+RGA AAI+VYDI N+ SF+RA+ W +EL+ + +P+ +V+ L GNK DL D+
Sbjct: 252 YHSVCHLYFRGANAAILVYDIANKDSFQRAQNWWKELENEFSPDEIVVILVGNKTDLEDS 311
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
R+VT EE +A+A+ L FMETSAK V + F +A+ L
Sbjct: 312 REVTLEEGKAFAESKKLLFMETSAKLNYQVTEAFTALAREL 352
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 126/201 (62%), Gaps = 13/201 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT Q +FE ++W++EL+ + N+V+ L GNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V +++QA+ ++ GL F+ETSA +TNV F I + + +P P+
Sbjct: 134 SVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKALASEDKPQPDKG 193
Query: 182 GMVLMD--RPGERTASASCCS 200
+++ +P E+ SA CCS
Sbjct: 194 TRIVVSETQPEEKKKSA-CCS 213
>gi|327267235|ref|XP_003218408.1| PREDICTED: ras-related protein Rab-6B-like [Anolis carolinensis]
Length = 208
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 128 TDLADKRQITIEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVASALPGMESVQEKSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E AS CS
Sbjct: 188 MIDIKLDKPQEPPASEGGCS 207
>gi|291399811|ref|XP_002716636.1| PREDICTED: RAB6B, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 208
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMESVQEKSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E AS CS
Sbjct: 188 MIDIKLDKPQEPPASEGGCS 207
>gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei]
gi|261326389|emb|CBH09349.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 230
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 116/167 (69%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
+ K+VLLGD GK+SL+ RF+ F + ++TIG FFS+TL +N+ + +WDTAG
Sbjct: 26 VKHKIVLLGDQAVGKTSLITRFMYDTFDQQYQATIGIDFFSKTLHINNRATRLHVWDTAG 85
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QER+ SL P Y R +AA ++VYDIT+++SF KW+ E++A ++++AL GNK D+
Sbjct: 86 QERFRSLIPSYIRNSAATVVVYDITSRSSFLSTFKWIDEVRAARGDDVIIALVGNKCDVQ 145
Query: 129 DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ 175
+ R+V+A+EAQ A EN L F+E SAKT TNV +F ++A+ +P V+
Sbjct: 146 EKREVSADEAQKRADENRLIFVEVSAKTGTNVKSLFRKVAEAIPVVE 192
>gi|322694855|gb|EFY86674.1| Rab5-like protein ypt5 [Metarhizium acridum CQMa 102]
Length = 230
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 128/201 (63%), Gaps = 29/201 (14%)
Query: 12 KLVLLG--------------DVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND- 56
KLVLLG V G+S++ K QF F+ESTIGAAF +QT+++++
Sbjct: 21 KLVLLGTRPMFPAHQSPPTNSVSLGESAVG----KDQFDSFRESTIGAAFLTQTISLDEN 76
Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNM 116
TVKFEIWDTAGQERY SLAPMYYR A A+IVYDIT S ++AK WV+ELQ Q ++
Sbjct: 77 TTVKFEIWDTAGQERYKSLAPMYYRNANCAVIVYDITQSTSLDKAKAWVKELQRQAKEDI 136
Query: 117 VMALAGNKADLL----DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
++ALAGNK DL+ D R + +A AYA+E L F ETSAKTA NV ++F IAK LP
Sbjct: 137 IIALAGNKLDLVTEQPDKRAIPTADAAAYAREANLLFFETSAKTAENVRELFTAIAKELP 196
Query: 173 RVQPAPNPSGMVLMDRPGERT 193
Q P + RPG+R+
Sbjct: 197 LDQAGPRHT------RPGQRS 211
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 118/184 (64%), Gaps = 10/184 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+AQA+A++ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDPAALPK 194
Query: 182 GMVL 185
G +
Sbjct: 195 GQTI 198
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 123/204 (60%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ ++A+A+A+ FFMETSA + NV++ F E+ ++ RV PA P
Sbjct: 135 AVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEIGDDPAALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKVGCCS 216
>gi|123482533|ref|XP_001323810.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|67944359|gb|AAY83815.1| small Rab GTPase Rab5a [Trichomonas vaginalis]
gi|121906682|gb|EAY11587.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 121/190 (63%), Gaps = 1/190 (0%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
AK+V+LG GKSS+V +G F E STIGAAF S+T+ + D +K +IWDT G E
Sbjct: 12 AKVVMLGSTTVGKSSIVTMLTRGSFSESCASTIGAAFLSKTINLGDQELKLQIWDTGGSE 71
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY ++APMY++ A AAIIVYDIT+ S+ + W++EL+ +G ++++ALAGNK+DL
Sbjct: 72 RYRAMAPMYFQNANAAIIVYDITSSTSYNDVESWLKELREKGPASIIIALAGNKSDLDQQ 131
Query: 131 RKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRP 189
R V E+AQ++AQ++G+ F ETSA N+ +IF ++A + R + P+ V +
Sbjct: 132 RCVATEDAQSFAQKHGIPIFKETSALKGINIQEIFTDVAVAIARGAVSTAPAEQVTLTES 191
Query: 190 GERTASASCC 199
+ CC
Sbjct: 192 NPKDKKKKCC 201
>gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces pombe 972h-]
gi|134131|sp|P17608.1|RYH1_SCHPO RecName: Full=GTP-binding protein ryh1
gi|5077|emb|CAA36715.1| ryh1 [Schizosaccharomyces pombe]
gi|2330800|emb|CAB11173.1| GTPase Ryh1 [Schizosaccharomyces pombe]
Length = 201
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ QF ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AIIVYDITN SF +KW+++++A+ ++++ L GNK DL D R
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD---R 188
+VT EE + A+E + METSAK NV +F +IA+ LP ++ S ++D +
Sbjct: 133 QVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVETQSTQ-MIDVSIQ 191
Query: 189 PGERTASASC 198
P E +S +C
Sbjct: 192 PNENESSCNC 201
>gi|169617289|ref|XP_001802059.1| hypothetical protein SNOG_11822 [Phaeosphaeria nodorum SN15]
gi|160703379|gb|EAT80866.2| hypothetical protein SNOG_11822 [Phaeosphaeria nodorum SN15]
Length = 261
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 116/207 (56%), Gaps = 46/207 (22%)
Query: 12 KLVLLGDVGAGK------------------SSLVLRFVKGQFIEFQESTIGAAFFSQTLA 53
KLVLLG+ GK SSLV+RFV F E +E TIGAAF +Q
Sbjct: 15 KLVLLGEAAVGKVYRTGRHIAELRKLILSQSSLVMRFVNNDFQENKEPTIGAAFLTQKCN 74
Query: 54 VNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
+ T+KFEIWDTAGQER+ SLAPMYYR A AA++VYDIT +S +A+ WV EL Q +
Sbjct: 75 LPTRTIKFEIWDTAGQERFASLAPMYYRNAQAALVVYDITKPSSLTKAQHWVAELHRQAS 134
Query: 114 PNMVMALAGNKADL----------------------------LDARKVTAEEAQAYAQEN 145
P +V+AL GNK+DL DAR+V + A+AYA+E
Sbjct: 135 PGIVIALVGNKSDLATAGGEDVTEDADDAPAAEGEDATEEDGADARRVPVKTAKAYAEEE 194
Query: 146 GLFFMETSAKTATNVNDIFYEIAKRLP 172
L F ETSAKT NV ++F IA +P
Sbjct: 195 SLLFFETSAKTGQNVAEVFTAIANAIP 221
>gi|389749162|gb|EIM90339.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 111/161 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GK+SL+ RF+ F ++TIG F S+TL ++D TV+ ++WDTAGQER
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTLYLDDRTVRLQLWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R + AI+V+DITN+ASF KW+ +++++ ++++ L GNKADL D R
Sbjct: 81 FRSLIPSYIRDSTVAIVVFDITNRASFMSTTKWIDDVRSERGNDVMVVLVGNKADLSDKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT EEA A +Q+ + FMETSAK NV +F +IA LP
Sbjct: 141 QVTLEEATAKSQQLNIMFMETSAKAGHNVKSLFKKIAMSLP 181
>gi|448535070|ref|XP_003870898.1| Ypt52 protein [Candida orthopsilosis Co 90-125]
gi|380355254|emb|CCG24771.1| Ypt52 protein [Candida orthopsilosis]
Length = 225
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 132/218 (60%), Gaps = 21/218 (9%)
Query: 3 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA--TVK 60
T+ + + KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +Q++ + ++ T+K
Sbjct: 8 TSAQRFVQFKLVLLGESAVGKSSIVHRFVKNTFDDARESTIGAAFLTQSITIPESQTTIK 67
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERY SLAPMYYR A +A+ VYDIT++ SF +A+ W++EL+ Q +V+AL
Sbjct: 68 FEIWDTAGQERYKSLAPMYYRNANSALCVYDITSRNSFTKAQDWIKELKKQAPSEIVVAL 127
Query: 121 AGNKADLLDARKVTAEEAQAYAQE---NGLFFM--ETSAKTATNVNDIFYEIAKRLP--- 172
GNK DL D R+V ++E Y E +G + E SAK V ++F I + LP
Sbjct: 128 VGNKVDLDDNREVQSDEVDEYISELQGDGFKIIKAECSAKNGDGVVELFEAIGRALPVEE 187
Query: 173 ----------RVQPAPNPSGMVLMDRPGERTA-SASCC 199
+ + G V ++RP A S SCC
Sbjct: 188 VLAANANRSRQGEVGGRRPGGVDLNRPKRAQAQSNSCC 225
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A++ FFMETSA + NV + F E+ ++ V PA P
Sbjct: 134 AVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDPAAPPK 193
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + + G+ SA +CCS
Sbjct: 194 GQTI-NVGGKDDVSAVKKSACCS 215
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 116/168 (69%), Gaps = 2/168 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+V LG+ G GK+SL+ RF+ F + ++TIG F S+T+ ++D T++ ++WDTAGQER
Sbjct: 12 KIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADLLDA 130
+ SL P Y R + AI+VYDIT + SFE KW+++++ + G+ N+++ + GNK+DL D
Sbjct: 72 FRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKTERGSENVILCIVGNKSDLSDE 131
Query: 131 RKVTAEEAQAYAQENG-LFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
R+VT EE +A A+E G FMETS K NV ++F +IAK LP Q +
Sbjct: 132 RQVTTEEGEAKAKELGATIFMETSTKAGHNVKNLFKKIAKSLPEFQNS 179
>gi|30424655|ref|NP_776142.1| ras-related protein Rab-6B [Mus musculus]
gi|96975097|ref|NP_057661.3| ras-related protein Rab-6B [Homo sapiens]
gi|155371985|ref|NP_001094599.1| ras-related protein Rab-6B [Bos taurus]
gi|386781658|ref|NP_001248165.1| ras-related protein Rab-6B [Macaca mulatta]
gi|126325809|ref|XP_001364646.1| PREDICTED: ras-related protein Rab-6B-like [Monodelphis domestica]
gi|296228059|ref|XP_002759647.1| PREDICTED: ras-related protein Rab-6B [Callithrix jacchus]
gi|297672009|ref|XP_002814108.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pongo abelii]
gi|301777392|ref|XP_002924114.1| PREDICTED: ras-related protein Rab-6B-like [Ailuropoda melanoleuca]
gi|311269411|ref|XP_003132476.1| PREDICTED: ras-related protein Rab-6B-like [Sus scrofa]
gi|348582027|ref|XP_003476778.1| PREDICTED: ras-related protein Rab-6B-like [Cavia porcellus]
gi|395519193|ref|XP_003763735.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Sarcophilus
harrisii]
gi|395832821|ref|XP_003789452.1| PREDICTED: ras-related protein Rab-6B [Otolemur garnettii]
gi|397503903|ref|XP_003822554.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pan paniscus]
gi|402861531|ref|XP_003895143.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Papio anubis]
gi|403265826|ref|XP_003925113.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Saimiri
boliviensis boliviensis]
gi|426218278|ref|XP_004003376.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Ovis aries]
gi|426342170|ref|XP_004036386.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Gorilla gorilla
gorilla]
gi|13633595|sp|Q9NRW1.1|RAB6B_HUMAN RecName: Full=Ras-related protein Rab-6B
gi|47117095|sp|P61294.1|RAB6B_MOUSE RecName: Full=Ras-related protein Rab-6B
gi|229891504|sp|A6QR46.1|RAB6B_BOVIN RecName: Full=Ras-related protein Rab-6B
gi|7385001|gb|AAF61637.1|AF166492_1 small GTPase RAB6B [Homo sapiens]
gi|20379056|gb|AAM21088.1|AF498940_1 small GTP binding protein RAB6B [Homo sapiens]
gi|12803379|gb|AAH02510.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|26331000|dbj|BAC29230.1| unnamed protein product [Mus musculus]
gi|30583365|gb|AAP35927.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|38148674|gb|AAH60618.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|60655043|gb|AAX32085.1| RAB6B [synthetic construct]
gi|112292963|dbj|BAF02859.1| Rab6B [Mus musculus]
gi|119599564|gb|EAW79158.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119599565|gb|EAW79159.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148689117|gb|EDL21064.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|151557109|gb|AAI50112.1| RAB6B protein [Bos taurus]
gi|168279011|dbj|BAG11385.1| Ras-related protein Rab-6B [synthetic construct]
gi|189065457|dbj|BAG35296.1| unnamed protein product [Homo sapiens]
gi|190690565|gb|ACE87057.1| RAB6B, member RAS oncogene family protein [synthetic construct]
gi|296490967|tpg|DAA33065.1| TPA: ras-related protein Rab-6B [Bos taurus]
gi|380783157|gb|AFE63454.1| ras-related protein Rab-6B [Macaca mulatta]
gi|383408451|gb|AFH27439.1| ras-related protein Rab-6B [Macaca mulatta]
gi|384943778|gb|AFI35494.1| ras-related protein Rab-6B [Macaca mulatta]
gi|410206664|gb|JAA00551.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410261278|gb|JAA18605.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410287730|gb|JAA22465.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410328335|gb|JAA33114.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|417397131|gb|JAA45599.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E AS CS
Sbjct: 188 MIDIKLDKPQEPPASEGGCS 207
>gi|354548327|emb|CCE45063.1| hypothetical protein CPAR2_700670 [Candida parapsilosis]
Length = 231
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 115/168 (68%), Gaps = 7/168 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDA--TVKFEIWDTAGQ 69
KLVLLG+ GKSS+V RFVK F + +ESTIGAAF +Q++ + + T+KFEIWDTAGQ
Sbjct: 21 KLVLLGESAVGKSSIVHRFVKNTFDDARESTIGAAFLTQSITIPETQTTIKFEIWDTAGQ 80
Query: 70 ERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
ERY SLAPMYYR A AA+ VYDIT++ SF +A+ W++EL+ Q ++V+AL GNK DL D
Sbjct: 81 ERYKSLAPMYYRNANAALCVYDITSRNSFAKAQDWIKELKKQAPSDIVVALVGNKLDLED 140
Query: 130 ARKVTAEEAQAYAQE---NGLFFM--ETSAKTATNVNDIFYEIAKRLP 172
R+V +EE Y E +G + E SAK V ++F I + LP
Sbjct: 141 NREVQSEEVDEYISELQTDGFKIIKAECSAKNGDGVVELFEAIGRALP 188
>gi|390597749|gb|EIN07148.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 214
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 110/161 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AI+V+DITN+ASF KW+ +++++ ++++ L GNKADL D R
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKADLSDKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT EEA +QE + FMETSAK NV +F +IA LP
Sbjct: 141 QVTLEEATTKSQEMNVMFMETSAKAGHNVKSLFKKIAMSLP 181
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 123/203 (60%), Gaps = 16/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 16 KLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 76 YRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLR 135
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA + NV + F E+ + +V PA P
Sbjct: 136 AVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPK 195
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + G+ SA CCS
Sbjct: 196 GQTI--NVGKDDVSAVKKVGCCS 216
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 112/171 (65%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF K +F +STIG F ++T V VK +IWDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+++YD+T A+FE A +W++EL+ +PN+V+ L GNK DL
Sbjct: 75 YRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
V EEA+A+A+ L+FMETSA ATNV + F E+ ++ ++ + G
Sbjct: 135 AVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDG 185
>gi|393245652|gb|EJD53162.1| GTP binding protein [Auricularia delicata TFB-10046 SS5]
Length = 214
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 111/164 (67%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AI+V+DITN+ASF KW+ +++++ ++++ L GNKADL D R
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGSDVIIVLVGNKADLSDKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ 175
+VT EEA A E + FMETSAK NV +F +IA LP V+
Sbjct: 141 QVTHEEATNKATEMNIMFMETSAKAGHNVKSLFKKIAMSLPGVE 184
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 111/171 (64%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF K +F +STIG F ++T V VK +IWDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+++YD+T A+FE A +W++EL+ +PN+V+ L GNK DL
Sbjct: 75 YRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
V EEA+A+A+ L+FMETSA ATNV F E+ ++ ++ + G
Sbjct: 135 AVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRSVDG 185
>gi|322699601|gb|EFY91361.1| Rab5-like protein ypt51 [Metarhizium acridum CQMa 102]
Length = 246
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 125/212 (58%), Gaps = 32/212 (15%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGA-------------AFFSQTLAVNDAT 58
KLVLLG+ GKSSLVLRFV F E +E TIGA AF +Q + T
Sbjct: 15 KLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGATVSQLTPHVCLKAAFLTQKCNLPTRT 74
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
+KFEIWDTAGQER+ SLAPMYYR A AA++VYD+T S +AK WV ELQ Q +P +V+
Sbjct: 75 IKFEIWDTAGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVI 134
Query: 119 ALAGNKADLL-----------------DARKVTAEEAQAYAQENGLFFMETSAKTATNVN 161
AL GNK DL DARKV+ EEA+AYA+E L F ETSAKT NV
Sbjct: 135 ALVGNKLDLASDSATGNETAEDGEESGDARKVSTEEAKAYAEEESLLFFETSAKTGHNVT 194
Query: 162 DIFYEIAKRLPR--VQPAPNPSGMVLMDRPGE 191
++F IA +P ++ A P +R GE
Sbjct: 195 EVFTAIANAIPETSLKSARGPGAAGTANRAGE 226
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T A+FE +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
V+ E+ + YA+ L+FMETSA ATNV + F E+ ++ R+ + G
Sbjct: 135 AVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEG 185
>gi|387018010|gb|AFJ51123.1| ras-related protein Rab-6A-like [Crotalus adamanteus]
Length = 212
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 12 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 71
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 72 DTAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 131
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP + AP S
Sbjct: 132 TDLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDNAPEKSKDD 191
Query: 185 LMD----RPGERTASASCCS 200
++D +P E+ + + CS
Sbjct: 192 MIDIKLEKPPEQPVTENGCS 211
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 16/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
VT E+A A+A+ FFMETSA + NV + F E+ ++ V PA P
Sbjct: 135 AVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKALDVGDDPAALPK 194
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + G+ SA CCS
Sbjct: 195 GQTI--NVGKDDVSAVKKVGCCS 215
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 15/201 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD GKS L+ RF + +F ++TIG F ++T+ V+ T+K +IWDTAGQER
Sbjct: 16 KVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +FE +W++EL+ + N+V+ L GNK+DL + R
Sbjct: 76 YRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDLGNLR 135
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-------------QPAP 178
V+ EEA+ A+ LFFMETSA ATNV+ F+ + + R+ Q P
Sbjct: 136 AVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEGAGGSQQVP 195
Query: 179 NPSGMVLMDRPGERTASASCC 199
P +L+ E + CC
Sbjct: 196 IPGTTLLLSEKKE--SKTGCC 214
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 128/203 (63%), Gaps = 14/203 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVN--------DIFYEIAKRLPRVQPAPNPSGM 183
V+ E+AQ+ A+ GL F+ETSA A NV+ DI++ I+K+ Q A + +G+
Sbjct: 134 AVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKALAAQEATSSTGL 193
Query: 184 ------VLMDRPGERTASASCCS 200
+ + G + SCCS
Sbjct: 194 PQGTTINVSNMAGNAGGNRSCCS 216
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 112/163 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLL 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
V E+ ++YA++ L FMETSA ATNV D F E+ ++ R+
Sbjct: 135 AVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 122/206 (59%), Gaps = 24/206 (11%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF + +F +STIG F ++++ ++D TVK +IWDTAGQER
Sbjct: 13 KLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQIWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+IVYD+T Q +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 73 YRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIMLVGNKADLRHLR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V EEA A+A+ +FMETSA + NV++ F E+ + V P P
Sbjct: 133 AVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTLEKGNDPGALPQ 192
Query: 182 GMVL-------MDRPGERTASASCCS 200
G + + +PG CCS
Sbjct: 193 GQTINLGDVSAVKKPG-------CCS 211
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 118/200 (59%), Gaps = 11/200 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAPN--P 180
V E+AQ YA+ GL F+ETSA ATNV F I + R+ +PAP
Sbjct: 134 AVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLTSEEPAPANIK 193
Query: 181 SGMVLMDRPGERTASASCCS 200
G +++ E CCS
Sbjct: 194 EGKMIVVGGSEANTKKPCCS 213
>gi|74834519|emb|CAI44571.1| rab_A23 [Paramecium tetraurelia]
Length = 206
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 122/205 (59%), Gaps = 13/205 (6%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
N K+VLLGD G GKSS+VLRF F EST+GAAF ++T+ VN KF+IWDTA
Sbjct: 2 NREVKVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTA 61
Query: 68 GQERYHSLAPMYYRG-AAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
GQE+Y SL P+YYRG A A+IVYDIT++ SF+ K WV EL+A G ++ L GNK D
Sbjct: 62 GQEKYKSLTPLYYRGFAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKND 121
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-----------PRVQ 175
L++ KV+ +EA YAQ+ G TS K + ++F IA+++ + +
Sbjct: 122 LIEDEKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQILYEEQNKLVEGKKTE 181
Query: 176 PAPNPSGMVLM-DRPGERTASASCC 199
NPS V + D+ ++ CC
Sbjct: 182 KPQNPSVKVTVEDQNKKKKKEGGCC 206
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V +A+A+A+ FFMETSA + NV++ F E+ ++ RV PA P
Sbjct: 135 AVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDDPAALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R + CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKSGCCS 216
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T A+FE +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 182
V+ E+ + YA+ L+FMETSA ATNV + F E+ ++ R+ + G
Sbjct: 135 AVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEG 185
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 113/163 (69%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F +++L V+ VK +IWDTAGQER
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T A+FE A++W++EL+ +PN+V+ L GNK+DL
Sbjct: 76 YRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGNKSDLRHLV 135
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
V +E +A+A+ L+FMETSA +TNV D F E+ ++ R+
Sbjct: 136 AVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRI 178
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E++ A+A+ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGDDPAALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R + CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKSGCCS 216
>gi|449498485|ref|XP_004177271.1| PREDICTED: ras-related protein Rab-6A-like [Taeniopygia guttata]
Length = 211
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 18 KLVSLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 77
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R
Sbjct: 78 FRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKR 137
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD---- 187
++T EE + A+E + F+ETSAKT NV +F +A LP + P S ++D
Sbjct: 138 QITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDMIDIKLE 197
Query: 188 RPGERTASASCCS 200
+P E+ + S CS
Sbjct: 198 KPPEQPVTESGCS 210
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+ +A+ FFMETSA + NV F E+ ++ RV PA P
Sbjct: 134 AVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + + G+ SA CCS
Sbjct: 194 GQTI-NVGGKDDVSAVKKSGCCS 215
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 15/201 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD GKS L+ RF + +F ++TIG F ++T+ V+ T+K +IWDTAGQER
Sbjct: 16 KVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +FE +W++EL+ + N+V+ L GNK+DL + R
Sbjct: 76 YRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDLGNLR 135
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-------------QPAP 178
V+ EEA+ A+ LFFMETSA ATNV+ F+ + + R+ Q P
Sbjct: 136 AVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEGAGGSQQIP 195
Query: 179 NPSGMVLMDRPGERTASASCC 199
P +L+ E + CC
Sbjct: 196 IPGTTLLLSEKKE--SKTGCC 214
>gi|37791225|gb|AAR03593.1| Rab5 [Leishmania donovani]
Length = 211
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ G GKSS+V R +K F E ST+GA+FF T V+D T V F+IWDTAGQE
Sbjct: 22 KLVLLGESGVGKSSVVQRLMKDAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQE 81
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
R+ SLA MYYRGAAAA++V+DI + +FE+A+ W++ELQA + +VM L GNK DL
Sbjct: 82 RFKSLASMYYRGAAAALVVFDIVSADTFEKARYWIRELQANSSETVVM-LVGNKKDLESE 140
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN--PSGMVLMDR 188
R+V+ +AQ A E G + ETSA++ V D F+ +A +L N G++
Sbjct: 141 RQVSLADAQQCAGEMGAMYHETSARSGDGVRDAFHAVAAKLIEANSTFNVREGGVMCHTE 200
Query: 189 PGERTASASCC 199
A CC
Sbjct: 201 NAAPRAENGCC 211
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 112/163 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLL 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
V E+ ++YA++ L FMETSA ATNV D F E+ ++ R+
Sbjct: 135 AVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 14/203 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F STIG F ++T+ V+D VK +IWDTAGQER
Sbjct: 16 KVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T + +F+ A++W++EL+ + N+V+ L GNKADL R
Sbjct: 76 YRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGNKADLRHLR 135
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
VT E+A A+A+ +G F METSA ATNV+ F E+ +++ V PA P
Sbjct: 136 AVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNALDIGEDPAAPPR 195
Query: 182 GMVLMDRPGERTAS----ASCCS 200
G + + S CCS
Sbjct: 196 GKTIDVGAAKDEVSPVNTGGCCS 218
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV------------QPAPN 179
V E+AQ+YA++ GL F+ETSA ATNV+ F I + R+ P
Sbjct: 134 AVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTLSSEESAAPVSV 193
Query: 180 PSG-MVLMDRPGERTASASCCS 200
G +++ P T +CCS
Sbjct: 194 KDGKTIVVGGPDPSTKKTTCCS 215
>gi|345494735|ref|XP_001604718.2| PREDICTED: ras-related protein Rab-6A-like [Nasonia vitripennis]
Length = 209
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF + KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN--PSG 182
DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP + N P
Sbjct: 128 TDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPED 187
Query: 183 M---VLMDRPGERTASASCCS 200
M VL D P E AS S C+
Sbjct: 188 MQEVVLKDTPIELNASESSCA 208
>gi|353236471|emb|CCA68465.1| probable YPT6-GTP-binding protein of the rab family [Piriformospora
indica DSM 11827]
Length = 219
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 109/161 (67%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AI+VYDITN+ASF KW+ +++++ ++++ L GNKADL D R
Sbjct: 81 FRSLIPSYIRDSSVAIVVYDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKADLSDKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT EEA A + L FMETSAK NV +F +IA LP
Sbjct: 141 QVTHEEASTKATQLNLMFMETSAKAGHNVKSLFKKIAMALP 181
>gi|406697451|gb|EKD00710.1| GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 193
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 124/195 (63%), Gaps = 9/195 (4%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
+ ++ KLVLL + + +V F+ + GAAF +QT+ +++AT VKFEIWD
Sbjct: 3 RTVSNKLVLLDEFSDFRVQVVCD-ADAAFLLY----AGAAFLTQTVKLDEATNVKFEIWD 57
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITN--QASFERAKKWVQELQAQGNPNMVMALAGN 123
TAGQERY SLAP+Y+R A AAIIVYDIT + SF++AK WV+ELQ Q +PN+V+ L GN
Sbjct: 58 TAGQERYKSLAPIYFRNANAAIIVYDITQPPETSFDKAKAWVRELQRQADPNIVIMLVGN 117
Query: 124 KADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
K DL RK E Q +AQE GL F E SAK+ V +F EIAK LP P P G
Sbjct: 118 KLDLASQRKTPRELGQQFAQEEGLLFCEASAKSGEGVESMFMEIAKALPLNAPKPGQQGG 177
Query: 184 VLMDRPGERTASASC 198
V ++ P ++ A ++C
Sbjct: 178 VKVN-PQQQEAQSAC 191
>gi|229367302|gb|ACQ58631.1| Ras-related protein Rab-6B [Anoplopoma fimbria]
Length = 208
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYSEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN +SF++ KW+++++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVSSFQQTSKWIEDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E + CS
Sbjct: 188 MIDIKLDKPQEPQTTEGGCS 207
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 118/200 (59%), Gaps = 11/200 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-----------QPAPNP 180
V E+AQ+YA++ GL F+ETSA ATNV F I + R+ PA
Sbjct: 134 AVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSEESAPASIK 193
Query: 181 SGMVLMDRPGERTASASCCS 200
G ++ E +CCS
Sbjct: 194 DGKTIVVGGPEPDTKKTCCS 213
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA + NV + F E+ ++ RV P P
Sbjct: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEVGDDPGALPK 194
Query: 182 GMVL-MDRPGERTASASCCS 200
G + + CCS
Sbjct: 195 GQTINVKDDVSAVKKVGCCS 214
>gi|307189589|gb|EFN73950.1| Ras-related protein Rab-6A [Camponotus floridanus]
gi|307196069|gb|EFN77792.1| Ras-related protein Rab-6A [Harpegnathos saltator]
gi|332025967|gb|EGI66120.1| Ras-related protein Rab-6A [Acromyrmex echinatior]
Length = 209
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF + KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN--PSG 182
DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP + N P
Sbjct: 128 TDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPED 187
Query: 183 M---VLMDRPGERTASASCCS 200
M VL D P E AS S C+
Sbjct: 188 MQEVVLKDTPIELKASESSCA 208
>gi|302692114|ref|XP_003035736.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
gi|300109432|gb|EFJ00834.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
Length = 210
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 110/161 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 18 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 77
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AI+V+DITN+ SF KW+ +++++ ++++ L GNKADL D R
Sbjct: 78 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKADLSDKR 137
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT EEA A AQ+ + FMETSAK NV +F +IA LP
Sbjct: 138 QVTLEEATAKAQQLNIMFMETSAKAGHNVKSLFKKIAMSLP 178
>gi|384499235|gb|EIE89726.1| GTP-binding protein ypt5 [Rhizopus delemar RA 99-880]
Length = 161
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVND-ATV 59
M K+ KLVLLGD GKSSLVLR+VK QF E++ESTIGAAF S+T+ ++ T+
Sbjct: 1 MPVNQQKSYTLKLVLLGDSSVGKSSLVLRYVKDQFDEYRESTIGAAFLSKTIKYDENTTI 60
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
KF+IWDTAGQERY SL P+YYR A A+IVYD+T +S ERAK W+ ELQ QG N V+A
Sbjct: 61 KFDIWDTAGQERYKSLTPIYYRNANCAVIVYDVTQLSSLERAKSWIDELQRQGESNTVIA 120
Query: 120 LAGNKADL 127
L GNK DL
Sbjct: 121 LVGNKCDL 128
>gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|374110173|gb|AEY99078.1| FAGR257Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 2/174 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+V LG+ G GK+SL+ RF+ F + ++TIG F S+T+ ++D T++ ++WDTAGQER
Sbjct: 14 KIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTVYLDDRTIRLQLWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDA 130
+ SL P Y R + AI+VYDITN+ SFE KWV++++ +G N+++ + GNK+DL+D
Sbjct: 74 FRSLIPSYIRDSHVAIVVYDITNKKSFEYIDKWVEDVRNERGEENLILCIVGNKSDLVDE 133
Query: 131 RKVTAEEAQAYAQ-ENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGM 183
RKVT EE + A+ N F+ETS K NV +F IAK LP Q SG+
Sbjct: 134 RKVTVEEGENKAKLLNAKIFVETSTKAGFNVGALFKRIAKLLPEFQNGKGTSGL 187
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 113/163 (69%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +A+FE A +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
V E+ +++A+ L+FMETSA ATNV + F E+ ++ R+
Sbjct: 135 AVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRI 177
>gi|145476009|ref|XP_001424027.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391089|emb|CAK56629.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 108/164 (65%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
N K+VLLGD G GKSS+VLRF F EST+GAAF ++T+ VN KF+IWDTA
Sbjct: 2 NREVKVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTA 61
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
GQE+Y SL P+YYR A A+IVYDIT++ SF+ K WV EL+A G ++ L GNK DL
Sbjct: 62 GQEKYKSLTPLYYREAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKNDL 121
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
++ KV+ +EA YAQ+ G TS K + ++F IA+++
Sbjct: 122 IEDEKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQI 165
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 123/202 (60%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPK 194
Query: 182 GMVLMDRPGERTASAS---CCS 200
G + + ++ CCS
Sbjct: 195 GQTINVGTKDDVSAVKKVGCCS 216
>gi|348501270|ref|XP_003438193.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oreochromis
niloticus]
Length = 208
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--NPSG 182
DL + R++T EE + A+E + F+ETSAKT NV +F +A LP ++ NP G
Sbjct: 128 TDLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E CS
Sbjct: 188 MIDIKLDKPAEPAVPEGGCS 207
>gi|393216771|gb|EJD02261.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 110/161 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AI+V+DITN+ SF +KW+ E++++ ++++ L GNKADL D R
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTRKWIDEVRSERGNDVIIVLVGNKADLSDKR 140
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT E+AQ A E + FMETSAK NV +F +IA LP
Sbjct: 141 EVTLEQAQELADELKIMFMETSAKAGHNVKSLFRKIALALP 181
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 126/202 (62%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVN--------DIFYEIAKRLPRVQPAPNPSGM 183
V+ E+AQ+ A+ GL F+ETSA A NV DI++ I+K+ Q A + +G+
Sbjct: 134 AVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKALAAQEANSSTGL 193
Query: 184 -----VLMDRPGERTASASCCS 200
+ + + SCCS
Sbjct: 194 PQGTTINVSNMSSNAGNRSCCS 215
>gi|383848737|ref|XP_003700004.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF + KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNPNSFHQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN--PSG 182
DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP + N P
Sbjct: 128 TDLSDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPED 187
Query: 183 M---VLMDRPGERTASASCCS 200
M VL D P E AS S C+
Sbjct: 188 MQEVVLKDTPIELKASESSCA 208
>gi|358253771|dbj|GAA53757.1| Ras-related protein Rab-5B, partial [Clonorchis sinensis]
Length = 240
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 93/121 (76%), Gaps = 2/121 (1%)
Query: 46 AFFSQTLAVNDA--TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKK 103
AF +QT+ D +V+FEIWDTAGQERYHSLAPMYYRGA AAIIVYDITN +SFERAK
Sbjct: 1 AFLTQTVICGDPPRSVRFEIWDTAGQERYHSLAPMYYRGAQAAIIVYDITNPSSFERAKS 60
Query: 104 WVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDI 163
WV EL + N V+ALAGNK DL R V+ EEAQAYA +NGL FMETSAK TN+ ++
Sbjct: 61 WVNELNERSNAVKVIALAGNKLDLDFKRAVSTEEAQAYATQNGLIFMETSAKACTNITEL 120
Query: 164 F 164
F
Sbjct: 121 F 121
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V E+A+A+A+ +F ETSA A NV D F E+ ++ RV PA P
Sbjct: 134 AVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTAS---ASCCS 200
G + + ++ A CCS
Sbjct: 194 GQTINVGSKDDVSAVKKAGCCS 215
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 5 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 64
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 65 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLR 124
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E++ A+A+ FFMETSA + NV F E+ ++ RV PA P
Sbjct: 125 AVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPAALPK 184
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R CCS
Sbjct: 185 GQTI--NVGSRDDVSAVKKGGCCS 206
>gi|401417481|ref|XP_003873233.1| putative small Rab GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489462|emb|CBZ24720.1| putative small Rab GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ G GKSS+V R +K F E ST+GA+FF T V+D T V F+IWDTAGQE
Sbjct: 22 KLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDNTAVHFDIWDTAGQE 81
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
R+ SLA MYYRGAAAA++V+DI + ++E+AK W++ELQ+ MVM L GNK DL
Sbjct: 82 RFKSLASMYYRGAAAALVVFDIVSADTYEKAKYWIRELQSNSPETMVM-LVGNKKDLESE 140
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
R+V+ +AQ A E G+ + ETSA++ V D F+ +A +L N
Sbjct: 141 RQVSLADAQQCAVEMGVMYHETSARSGDGVQDAFHAVAAKLVETNSTFN 189
>gi|47228262|emb|CAG07657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP--NPSG 182
DL + R++T EE + A+E + F+ETSAKT NV +F +A LP ++ N G
Sbjct: 128 TDLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANSEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E T CS
Sbjct: 188 MIDIKLDKPAEPTVPEGGCS 207
>gi|326435249|gb|EGD80819.1| hypothetical protein PTSG_01405 [Salpingoeca sp. ATCC 50818]
Length = 195
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 122/196 (62%), Gaps = 7/196 (3%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
+I AK+VL+G GK+SLV+R+V F E ST+GA+FF + T+K +IWDTA
Sbjct: 3 SIEAKVVLVGSQDVGKTSLVVRYVNNDFSEKVSSTVGASFFKHKINAGKHTIKLQIWDTA 62
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
G+ER+HS+ PMYYRGA+AA++VYD+TN S + A W+ EL+ + ++++ L NK DL
Sbjct: 63 GEERFHSMLPMYYRGASAALLVYDVTNPKSLDDALDWINELRDNCSEHLILCLVANKMDL 122
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----QPAPNPSGM 183
++ EE + AQEN F +TSAKT + +++ F +IAK L + P+PN G
Sbjct: 123 VEEGCDAIEEGRRLAQENDALFHQTSAKTGSGISETFVDIAKELIGLTGEETPSPN-QGT 181
Query: 184 VLMDRPGERTASASCC 199
V ++ E+ CC
Sbjct: 182 VNVNETTEQ--KKQCC 195
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 123/202 (60%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+IVYD+T +FE ++W++EL++ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+AQA+A+ +FMETSA + NV + F E+ + RV P P
Sbjct: 135 AVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPK 194
Query: 182 GMVLMDRPGERTAS---ASCCS 200
G + + ++ A CCS
Sbjct: 195 GQTIDIGSKDDVSAVKKAGCCS 216
>gi|357017139|gb|AET50598.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+S++ RF+ F ++TIG F S+TL + D TV+ ++WDTAGQER
Sbjct: 11 KLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQLWDTAGQER 70
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++AA++VYDITN+ASF KW++++ A+ ++V+AL GNK DL D R
Sbjct: 71 FRSLIPSYIRDSSAAVVVYDITNRASFINTTKWIEDVWAERGKDVVIALVGNKTDLSDRR 130
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD 187
+V+ EE + A+E G+ F+ETSAK NV +F ++A LP ++ + S ++D
Sbjct: 131 QVSPEEGEQKAREQGILFIETSAKAGHNVKTLFRKLAAALPGLETQQSASDAQMVD 186
>gi|237829989|ref|XP_002364292.1| RAB6 protein [Toxoplasma gondii ME49]
gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gondii]
gi|211961956|gb|EEA97151.1| RAB6 protein [Toxoplasma gondii ME49]
gi|221507160|gb|EEE32764.1| RAB6 protein, putative [Toxoplasma gondii VEG]
Length = 209
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 126/196 (64%), Gaps = 7/196 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+S++ RF+ F ++TIG F S+TL + D TV+ ++WDTAGQER
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQLWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++AA++VYDITN+ASF KW+++++A+ +++++L GNK DL D R
Sbjct: 73 FRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVGNKTDLADRR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD---- 187
+V+ EE + AQE+ + F+ETSAK N+ ++F ++A LP ++ S ++D
Sbjct: 133 QVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLASALPGLETQQTASDAQMVDVQLN 192
Query: 188 ---RPGERTASASCCS 200
+ + T+ S CS
Sbjct: 193 ATPQQQDLTSKTSSCS 208
>gi|261333469|emb|CBH16464.1| GTP binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 230
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 118/181 (65%), Gaps = 20/181 (11%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN------------- 55
I AK VLLG+ GKSS+ LRF + +F QE+TIGAAF S+++ V+
Sbjct: 14 ITAKTVLLGESAVGKSSIALRFARNEFSSNQETTIGAAFLSRSVTVSATSQSGGGGAVAN 73
Query: 56 --DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
T+KFEIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++EL+A +
Sbjct: 74 ATSGTIKFEIWDTAGQERYRSLAPIYYRGACGALVVYDITSAESLKKAQMWMRELRANAD 133
Query: 114 PNMVMALAGNKADLLDARKVTAEEAQAYAQE---NGLFFMETSAKTATNVNDIFYEIAKR 170
P +++ L GNK D+ R+V+ E+ A AQE NG F E SAK NV ++F ++A+
Sbjct: 134 PTLLIILVGNKKDMESLRQVSYEDGAAVAQEEDVNGFF--EVSAKENVNVEEVFAKLARL 191
Query: 171 L 171
L
Sbjct: 192 L 192
>gi|343427853|emb|CBQ71379.1| probable YPT6-GTP-binding protein of the rab family [Sporisorium
reilianum SRZ2]
Length = 218
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 111/161 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 20 KLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ A++VYDITN+ASF+ KWV +++A+ ++++ L GNK DL D R
Sbjct: 80 FRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDLSDKR 139
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT EEA+ AQE + F+ETSAK NV +F +IA+ LP
Sbjct: 140 QVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALP 180
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+ +A+ FFMETSA + NV F E+ ++ RV PA P
Sbjct: 134 AVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDPAAPPR 193
Query: 182 GMVLMDRPGERTAS----ASCCS 200
G + + G+ S A CCS
Sbjct: 194 GQTI-NVGGKDDVSAVKKAGCCS 215
>gi|146084122|ref|XP_001464928.1| putative ras-related protein rab-5 [Leishmania infantum JPCM5]
gi|398013871|ref|XP_003860127.1| ras-related protein rab-5, putative [Leishmania donovani]
gi|134069023|emb|CAM67167.1| putative ras-related protein rab-5 [Leishmania infantum JPCM5]
gi|322498346|emb|CBZ33420.1| ras-related protein rab-5, putative [Leishmania donovani]
Length = 236
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 22/184 (11%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFS-------------------- 49
+AK+V+LG+ GAGKSS+ LRF + +F+ QE+TIGAAF S
Sbjct: 13 SAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIPPPRGVAAAPGGATS 72
Query: 50 -QTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL 108
QTL +K+EIWDTAGQER+ SLAP+YYRGA A++VYDITN S ++A+ W++EL
Sbjct: 73 AQTLQQQMRALKYEIWDTAGQERFRSLAPIYYRGACGALVVYDITNSESLKKAQTWIKEL 132
Query: 109 QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEI 167
+A +P++++ L GNK DL R+V+ E+ Q A E L F E SAK NV +F ++
Sbjct: 133 RANADPSLIIVLVGNKKDLESLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDL 192
Query: 168 AKRL 171
A +L
Sbjct: 193 AAKL 196
>gi|157866120|ref|XP_001681766.1| putative small Rab GTP binding protein [Leishmania major strain
Friedlin]
gi|68125065|emb|CAJ02473.1| putative small Rab GTP binding protein [Leishmania major strain
Friedlin]
Length = 212
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ G GKSS+V R +K F E ST+GA+FF T V+D T V F+IWDTAGQE
Sbjct: 23 KLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQE 82
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
R+ SLA MYYRGAAAA++V+DI + +FE+A+ W++ELQA +P ++ L GNK DL
Sbjct: 83 RFKSLASMYYRGAAAALVVFDIVSADTFEKARYWIRELQAN-SPETIVMLVGNKKDLESE 141
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 177
R+V+ +AQ A E G + ETSA++ V D F+ +A +L A
Sbjct: 142 RQVSVADAQQCAVEMGAVYHETSARSGDGVRDAFHAVAAKLIETNSA 188
>gi|254579943|ref|XP_002495957.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
gi|238938848|emb|CAR27024.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
Length = 214
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
Query: 2 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKF 61
A +G K+V LG+ G GK+SL+ RF+ F + ++TIG F S+T+ ++D T++
Sbjct: 4 ARSGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRL 63
Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMAL 120
++WDTAGQER+ SL P Y R + AI+VYDIT + SFE KW+++++ +G N+++ +
Sbjct: 64 QLWDTAGQERFRSLIPSYIRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGEENVILCI 123
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
GNK+DL D R+V+ EE + A+ G FMETS K NV ++F IAK LP Q +PN
Sbjct: 124 VGNKSDLSDERQVSTEEGETKAKVLGAKIFMETSTKAGYNVKNLFKRIAKSLPEFQESPN 183
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 118/200 (59%), Gaps = 11/200 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAPN--P 180
V E+AQ +A++ GL F+ETSA ATNV F I + R+ PAP
Sbjct: 134 AVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSDDPAPAGIK 193
Query: 181 SGMVLMDRPGERTASASCCS 200
G L+ + +CCS
Sbjct: 194 EGKTLVVDGSDTNTKKTCCS 213
>gi|342184845|emb|CCC94327.1| ras-related protein rab-5 [Trypanosoma congolense IL3000]
Length = 227
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 130/217 (59%), Gaps = 27/217 (12%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT---------- 58
I AK VLLG+ GKSS+ LRF + +F QE+TIGAAF S+++ V AT
Sbjct: 12 ITAKTVLLGESAVGKSSIALRFARNEFSPNQETTIGAAFLSRSVTVTPATQSTNGAVVAA 71
Query: 59 -----VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
VKFEIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++EL+A +
Sbjct: 72 GASGTVKFEIWDTAGQERYRSLAPIYYRGACGALVVYDITSAESLKKAQMWMRELRANAD 131
Query: 114 PNMVMALAGNKADLLDARKVTAEEAQAYAQE---NGLFFMETSAKTATNVNDIFYEIAKR 170
P +++ L GNK D+ R+V+ E+ A A+E NG F E SAK NV ++F ++A+
Sbjct: 132 PTLLIVLVGNKKDMEALRQVSYEDGAAVAREEDVNGFF--EVSAKDNVNVEEVFAKLARL 189
Query: 171 LPRV-------QPAPNPSGMVLMDRPGERTASASCCS 200
L +P G+ L++ P + S C+
Sbjct: 190 LLEHGLGANAGGGSPGARGVQLLEPPARQQKKESECA 226
>gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
Length = 219
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 111/161 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 5 KLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 64
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ A++VYDITN+ASF+ KWV +++A+ ++++ L GNK DL D R
Sbjct: 65 FRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDLSDKR 124
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT EEA+ AQE + F+ETSAK NV +F +IA+ LP
Sbjct: 125 QVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALP 165
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
N K+VL+G+ G GKS+L+ RF K +F +TIG F ++T+ +N+ T+K +IWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQIWDTA 67
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
G ERY ++ YYRGA A++VYDIT ++E ++W++EL +P++V+ L GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGNKSDL 127
Query: 128 LDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY----EIAKRLPRVQPAPNPSGM 183
R V EEA+ +A++ GL F+ETSA +TNV F EI K++ + P
Sbjct: 128 ESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVRGPMSA 187
Query: 184 VLMDRP-GERTASASCC 199
V ++ P E T CC
Sbjct: 188 VTLNSPKAEDTEKKPCC 204
>gi|157867931|ref|XP_001682519.1| putative ras-related protein rab-5 [Leishmania major strain
Friedlin]
gi|68125973|emb|CAJ03989.1| putative ras-related protein rab-5 [Leishmania major strain
Friedlin]
Length = 236
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 120/184 (65%), Gaps = 22/184 (11%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV----------NDAT- 58
+AK+V+LG+ GAGKSS+ LRF + +F+ QE+TIGAAF S+T+ + AT
Sbjct: 13 SAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIPPPRGTAAAPGSATS 72
Query: 59 ----------VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL 108
+K+EIWDTAGQER+ SLAP+YYRGA A++VYDITN S ++A+ W++EL
Sbjct: 73 AHALQQQMRALKYEIWDTAGQERFRSLAPIYYRGACGALVVYDITNSESLKKAQTWIKEL 132
Query: 109 QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEI 167
+A +P++++ L GNK DL R+V+ E+ Q A E L F E SAK NV +F ++
Sbjct: 133 RANADPSLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDL 192
Query: 168 AKRL 171
A +L
Sbjct: 193 AAKL 196
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E++ A+A+ FFMETSA + NV + F E+ ++ RV P P
Sbjct: 135 AVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIGDDPTALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R + CCS
Sbjct: 195 GQTI--DVGSRDDVSAVKKSGCCS 216
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAP---N 179
V E+AQ Y+++ GL F+ETSA ATNV F I + R+ +PA
Sbjct: 134 AVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKSLSSNEPASANIK 193
Query: 180 PSGMVLMDRPGERTASASCCS 200
S + + P + SCC+
Sbjct: 194 ESMTITVGGPQSNASKPSCCT 214
>gi|409082156|gb|EKM82514.1| hypothetical protein AGABI1DRAFT_111121 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199982|gb|EKV49906.1| GTP binding protein [Agaricus bisporus var. bisporus H97]
Length = 214
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLGD GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 22 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AI+V+DITN+ SF KW+++++++ ++++ L GNKADL D R
Sbjct: 82 FRSLIPSYIRDSSVAIVVFDITNRQSFMSTTKWIEDVRSERGNDVIIVLVGNKADLSDKR 141
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----QPAPNPSGMVLMD 187
+VT EEA A A + + FMETSAK NV +F +IA LP + Q N V
Sbjct: 142 QVTLEEATAKATQLNIMFMETSAKAGHNVKGLFKKIAMSLPGMEKENQSDTNTKIDVTTS 201
Query: 188 RPGERTASASC 198
GE ++SC
Sbjct: 202 SAGEVPEASSC 212
>gi|51480434|gb|AAH80215.1| Rab6b protein [Danio rerio]
Length = 207
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 7 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 66
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 67 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNK 126
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 127 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGCNVKQLFRRVAAALPGMESMQETSKEG 186
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E + CS
Sbjct: 187 MIDIKLDKPQEPPTTEGGCS 206
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 112/163 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T A+FE +W++EL+ + N+V+ L GNKADL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
V+ E+ ++YA++ L+FMETSA ATNV + F E+ ++ R+
Sbjct: 135 AVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRI 177
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 15/215 (6%)
Query: 1 MATTGNK-NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATV 59
MA G+K + K+VL+GD GKS ++ RF + +F ++TIG F ++TL ++ +V
Sbjct: 1 MAGAGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV 60
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
K +IWDTAGQERY ++ YYRGA A++VYDIT + SF+ +W+ EL+A + N+V+
Sbjct: 61 KAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIM 120
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
L GNK+DL + R V+ E+A+ +A++ LFF+ETSA ATNV F + + ++ N
Sbjct: 121 LVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKN 180
Query: 180 --------------PSGMVLMDRPGERTASASCCS 200
P VL+ P + + CCS
Sbjct: 181 MVSEPKSNGAAPAMPGTKVLVPGPAQEIPKSKCCS 215
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPK 194
Query: 182 GMVLMDRPGERTASAS---CCS 200
G + + ++ CCS
Sbjct: 195 GQTINVGSKDDVSAVKKVGCCS 216
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 38 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 97
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 98 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 157
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+ +A+ FFMETSA + NV F E+ ++ RV PA P
Sbjct: 158 AVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDPAAPPR 217
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + + G+ SA CCS
Sbjct: 218 GQTI-NVGGKDDVSAVKKSGCCS 239
>gi|348541887|ref|XP_003458418.1| PREDICTED: ras-related protein Rab-17-like [Oreochromis niloticus]
Length = 236
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
+ K+VLLG G GKSSL LRF K +F T+G A+ +Q + +++AT++FEIWDTA
Sbjct: 25 TLRVKMVLLGSSGVGKSSLALRFSKDEF-RSTSPTVGCAYLTQVVHLSNATLRFEIWDTA 83
Query: 68 GQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKAD 126
GQE+YHS+ P+YYRGA A++VYDIT + +F RA+ W++EL+ Q P + V+ L GNK D
Sbjct: 84 GQEKYHSVTPLYYRGAHVALLVYDITQRETFVRAQVWLKELEKQYIPGSTVIWLVGNKGD 143
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKR 170
L R+V EE ++ A GL+F+ETSA + VN++ + K+
Sbjct: 144 LAHDRQVPLEEGESLASNKGLYFIETSALSGEQVNELLQSVGKK 187
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A ++++ +FMETSA + NV F E+ ++ RV PA P
Sbjct: 135 AVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPAALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R A CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKAGCCS 216
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V++ VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA A NV + F E+ ++ RV PA P
Sbjct: 135 AVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDPATLPK 194
Query: 182 GMVL----MDRPGERTASASCCS 200
G + D E CCS
Sbjct: 195 GQSINVGSKDDVSE-VKKVGCCS 216
>gi|258597414|ref|XP_001348128.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
gi|254832720|gb|AAN36041.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 111/174 (63%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+S++ RF+ F +STIG F S+TL +++ V+ ++WDTAGQER
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R +AAAI+VYDITN+ SFE KW+Q++ + ++++AL GNK DL D R
Sbjct: 73 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
KVT EE AQE F ETSAK N+ +F +IA +LP + N V+
Sbjct: 133 KVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNLDNTNNNEANVV 186
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V++ +K ++WDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V EEA+++++ +FFMETSA ATNV F + ++ RV P P
Sbjct: 135 AVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDPMSLPK 194
Query: 182 GMVL-MDRPGERTA--SASCCS 200
G + + + TA S+ CCS
Sbjct: 195 GQTIDIGNKDDVTAVKSSGCCS 216
>gi|71748886|ref|XP_827782.1| Ras-related protein Rab-5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833166|gb|EAN78670.1| ras-related protein rab-5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 230
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 118/181 (65%), Gaps = 20/181 (11%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN------------- 55
I AK VLLG+ GKSS+ LRF + +F QE+TIGAAF S+++ V+
Sbjct: 14 ITAKTVLLGESAVGKSSIALRFARNEFSSNQETTIGAAFLSRSVTVSATSQSGGGGAVAN 73
Query: 56 --DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGN 113
T+KFEIWDTAGQERY SLAP+YYRGA A++VYDIT+ S ++A+ W++EL+A +
Sbjct: 74 AASGTIKFEIWDTAGQERYRSLAPIYYRGACGALVVYDITSAESLKKAQMWMRELRANAD 133
Query: 114 PNMVMALAGNKADLLDARKVTAEEAQAYAQE---NGLFFMETSAKTATNVNDIFYEIAKR 170
P +++ L GNK D+ R+V+ E+ A AQE NG F E SAK NV ++F ++A+
Sbjct: 134 PTLLIILVGNKKDMESLRQVSYEDGAAVAQEEDVNGFF--EVSAKENVNVEEVFAKLARL 191
Query: 171 L 171
L
Sbjct: 192 L 192
>gi|340718722|ref|XP_003397812.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Bombus
terrestris]
gi|350409818|ref|XP_003488853.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Bombus
impatiens]
Length = 209
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF + KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN--PSG 182
DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP + N P
Sbjct: 128 TDLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPED 187
Query: 183 M---VLMDRPGERTASASCCS 200
M VL D P E AS S C+
Sbjct: 188 MQEVVLKDTPIELKASESSCA 208
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAPN--- 179
V E+AQ YA++ GL F+ETSA ATNV + F I + R+ PA N
Sbjct: 134 AVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSLSSNDPAANIIK 193
Query: 180 -PSGMVLMDRPGERTASASCCS 200
+ + P T SCC+
Sbjct: 194 EGKTITVGGAPEPNTNKPSCCT 215
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 111/163 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++T V+ VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLL 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
V E+ ++YA++ L FMETSA ATNV D F E+ ++ R+
Sbjct: 135 AVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177
>gi|123492550|ref|XP_001326088.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121908997|gb|EAY13865.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 121/195 (62%), Gaps = 8/195 (4%)
Query: 9 INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
I AK+VLLG GK+ +V R F Q ST+GA+F ++TL ++D TV IWDTAG
Sbjct: 4 IEAKVVLLGATSVGKTCIVTRATSNFFDPEQVSTVGASFSAKTLQIDDTTVTLRIWDTAG 63
Query: 69 QERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL 128
QER+ +LAPMYY+G+ AAIIV+ + + SFE A +WV EL + ++ L GNKADL+
Sbjct: 64 QERFRALAPMYYQGSQAAIIVFSLDSTDSFEDANQWVDELGPHFDQMPLLYLVGNKADLV 123
Query: 129 DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA--PNPSGMVLM 186
D R V EEAQ A + G + ETSAKT N++++F IA+R+ + PNP +
Sbjct: 124 DNRTVKLEEAQERADKMGALYFETSAKTGQNIDELFASIAERIKSAEKPVDPNPD----V 179
Query: 187 DRPGERTASA--SCC 199
+ PG T+S CC
Sbjct: 180 NFPGGSTSSGKKKCC 194
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 15/215 (6%)
Query: 1 MATTGNK-NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATV 59
MA G+K + K+VL+GD GKS ++ RF + +F ++TIG F ++TL ++ +V
Sbjct: 1 MAGAGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV 60
Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA 119
K +IWDTAGQERY ++ YYRGA A++VYDIT + SF+ +W+ EL+A + N+V+
Sbjct: 61 KAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIM 120
Query: 120 LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 179
L GNK+DL + R V+ E+A+ +A++ LFF+ETSA ATNV F + + ++ N
Sbjct: 121 LVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKN 180
Query: 180 --------------PSGMVLMDRPGERTASASCCS 200
P VL+ P + + CCS
Sbjct: 181 MVSEPKSNGAAPAMPGTKVLVPGPAQEIPKSKCCS 215
>gi|296415924|ref|XP_002837633.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633511|emb|CAZ81824.1| unnamed protein product [Tuber melanosporum]
Length = 208
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 16 KLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ A++VYDITN+ SF+ KWV +++ + ++++ L GNK DL D R
Sbjct: 76 FRSLIPSYIRDSSVAVVVYDITNRTSFQNTTKWVDDVRGERGNDVIIVLVGNKTDLNDKR 135
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA---PNPSGM-VLMD 187
+VT EE + A+E + F+ETSAK NV +F IA+ LP ++ PN + V +D
Sbjct: 136 QVTTEEGEKKAKEFKVMFIETSAKAGHNVKTLFKRIAQALPGMEGTLNEPNSEMINVDID 195
Query: 188 RPGERTASASC 198
R A SC
Sbjct: 196 RNDSTQADGSC 206
>gi|145251179|ref|XP_001397103.1| Ras-related protein Rab-6A [Aspergillus niger CBS 513.88]
gi|134082633|emb|CAK42527.1| unnamed protein product [Aspergillus niger]
gi|350636440|gb|EHA24800.1| hypothetical protein ASPNIDRAFT_40721 [Aspergillus niger ATCC 1015]
gi|358373872|dbj|GAA90468.1| secretion related GTPase C [Aspergillus kawachii IFO 4308]
Length = 209
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 119/190 (62%), Gaps = 3/190 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 18 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 77
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ A++VYDI+N SF+ +KW+ +++ + ++++ L GNK DL D R
Sbjct: 78 FRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKTDLNDKR 137
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD---R 188
+VT + + A++NGL F+ETSAK NV +F IA+ LP ++ N ++D
Sbjct: 138 EVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEANRGDNQMIDVNIT 197
Query: 189 PGERTASASC 198
P E T + C
Sbjct: 198 PKETTTNDGC 207
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 10/199 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F +++L VN+ +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T ++FE ++W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAPN-PS 181
V E+A+++A+ L+FMETSA +TNV + F E+ ++ V Q + N PS
Sbjct: 135 AVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGQDSGNVPS 194
Query: 182 GMVLMDRPGERTASASCCS 200
+D CCS
Sbjct: 195 KGEKIDVDVSAVKKTGCCS 213
>gi|221487362|gb|EEE25594.1| RAB6 protein, putative [Toxoplasma gondii GT1]
Length = 234
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 126/196 (64%), Gaps = 7/196 (3%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+S++ RF+ F ++TIG F S+TL + D TV+ ++WDTAGQER
Sbjct: 38 KLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQLWDTAGQER 97
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++AA++VYDITN+ASF KW+++++A+ +++++L GNK DL D R
Sbjct: 98 FRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVGNKTDLADRR 157
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD---- 187
+V+ EE + AQE+ + F+ETSAK N+ ++F ++A LP ++ S ++D
Sbjct: 158 QVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLASALPGLETQQTASDAQMVDVQLN 217
Query: 188 ---RPGERTASASCCS 200
+ + T+ S CS
Sbjct: 218 ATPQQQDLTSKTSSCS 233
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 125/201 (62%), Gaps = 12/201 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F +++L V+D +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T ++FE + W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V E+A+++A++ L+FMETSA ATNV + F E+ ++ + + A PS
Sbjct: 135 AVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPS 194
Query: 182 GMVLMDRPGERTA--SASCCS 200
+D + +A CCS
Sbjct: 195 KGDKIDIGKDVSAVKKGGCCS 215
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%), Gaps = 10/184 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ ++A+ +A+ FFMETSA + NV++ F E+ ++ RV PA P
Sbjct: 135 AVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSKKTLEIGDDPAALPK 194
Query: 182 GMVL 185
G +
Sbjct: 195 GQTI 198
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 124/203 (61%), Gaps = 14/203 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D +K +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+ +A+A+ +FMETSA +TNV + F E+ ++ R+ PA PS
Sbjct: 134 AVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGEDPAAVPS 193
Query: 182 G--MVLMDRPGERTA--SASCCS 200
+ + + TA CCS
Sbjct: 194 KGQTIHVGNKDDVTAMKKVGCCS 216
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 106/160 (66%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS L+ RF K QF Q+ TIG F ++T+ ++D +K +IWDTAGQER
Sbjct: 15 KIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGAA A+IV+DIT Q SFE KW +ELQ + +V L GNK DL D R
Sbjct: 75 YRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
++ + A +AQE + ++ETSA +TNV F++I K +
Sbjct: 135 NISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYI 174
>gi|395814866|ref|XP_003780960.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Otolemur
garnettii]
Length = 208
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D T++ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R +AAA++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP ++ + S
Sbjct: 128 TDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSRED 187
Query: 185 LMD----RPGERTASASCCS 200
++D +P E T S CS
Sbjct: 188 MIDIKLEKPQEPTVSEGGCS 207
>gi|358059194|dbj|GAA95133.1| hypothetical protein E5Q_01788 [Mixia osmundae IAM 14324]
Length = 261
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 41/213 (19%)
Query: 1 MATTG--NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT 58
MA G + + KLVLLG GKSS+VLRFV+ F E +E TIGAAF +Q + D
Sbjct: 1 MAEAGAVQRPVQVKLVLLGAAAVGKSSVVLRFVQNDFQENKEPTIGAAFLTQKCRLEDKV 60
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
+KFE+WDTAGQER+HSLAPMYYR AAAA++VYD+T+ S ++AK WV ELQ Q PN+V+
Sbjct: 61 IKFEVWDTAGQERFHSLAPMYYRNAAAAVVVYDVTSAVSLDKAKSWVAELQRQATPNIVI 120
Query: 119 ALAGNKADLL---------------------------------------DARKVTAEEAQ 139
A GNK DL+ D R+V EEA+
Sbjct: 121 AFVGNKIDLVSGSSSESEVPAAAATETEGENAEATDDVVPTSTASASSADRRQVPREEAE 180
Query: 140 AYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
AYA+E GL F ETSAKT V ++F EIAK++P
Sbjct: 181 AYAKEAGLLFFETSAKTGEGVVEVFTEIAKKIP 213
>gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum]
Length = 240
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 111/174 (63%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+S++ RF+ F +STIG F S+TL +++ V+ ++WDTAGQER
Sbjct: 46 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 105
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R +AAAI+VYDITN+ SFE KW+Q++ + ++++AL GNK DL D R
Sbjct: 106 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLR 165
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
KVT EE AQE F ETSAK N+ +F +IA +LP + N V+
Sbjct: 166 KVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNLDNTNNNEANVV 219
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+A+A+ FFMETSA + NV + F E+ ++ RV PA P
Sbjct: 135 AVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPK 194
Query: 182 GMVLMDRPGERTASAS---CCS 200
G + + ++ CCS
Sbjct: 195 GQTINVGSKDDVSAVKKVGCCS 216
>gi|432877573|ref|XP_004073166.1| PREDICTED: ras-related protein Rab-6B-like isoform 3 [Oryzias
latipes]
Length = 211
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D T++ ++W
Sbjct: 11 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 70
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R +AAA++VYDI N SF++ KW+ +++ + ++++ L GNK
Sbjct: 71 DTAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 130
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R+V+ E A+ A+E + ++ETSAK NV +F +A LP + AP S
Sbjct: 131 TDLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSAPEKSKED 190
Query: 185 LMD----RPGERTASASCCS 200
++D R E T + S CS
Sbjct: 191 MIDIKLERQPEMTVTESSCS 210
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 128/212 (60%), Gaps = 13/212 (6%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA T N + K+VL+GD G GKS+L+ RF + +F + +STIG F ++++ V +K
Sbjct: 1 MADTSNYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
+IWDTAGQERY ++ YYRGA A++VYDI+ + S+E ++W++EL+ + N+V+ L
Sbjct: 61 AQIWDTAGQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIML 120
Query: 121 AGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVN--------DIFYEIAKRL- 171
GNK+DL R V +EA+A+A ENGL F+ETSA A+NV+ DI+ ++ R
Sbjct: 121 VGNKSDLKHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTL 180
Query: 172 -PRVQPAPNPSGMVLMDRPGERT---ASASCC 199
P PSG + P + S CC
Sbjct: 181 ESSANPIEAPSGNTVSVGPSLDSNAKQSNGCC 212
>gi|154335613|ref|XP_001564045.1| putative ras-related protein rab-5 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061076|emb|CAM38097.1| putative ras-related protein rab-5 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 236
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 119/184 (64%), Gaps = 22/184 (11%)
Query: 10 NAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT----------- 58
+AK+V+LG+ GAGKSS+ LRF + +F+ QE+TIGAAF S+T+ + A
Sbjct: 13 SAKIVMLGESGAGKSSIALRFARNEFLANQETTIGAAFLSKTVMMPPARGAAAAPGGAAS 72
Query: 59 ----------VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL 108
+K+EIWDTAGQER+ SLAP+YYRGA A++VYDITN S ++A+ W++EL
Sbjct: 73 AHALQQQMRALKYEIWDTAGQERFRSLAPIYYRGACGALVVYDITNSESLKKAQTWIKEL 132
Query: 109 QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEI 167
+A +P++++ L GNK DL R+V E+ Q A E L F ETSAK NV +F ++
Sbjct: 133 RANADPSLIIVLVGNKKDLESLRQVPFEDGQRLAAEEQLAAFYETSAKDNNNVEQVFLDL 192
Query: 168 AKRL 171
A +L
Sbjct: 193 AGKL 196
>gi|294895256|ref|XP_002775113.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239881042|gb|EER06929.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 176
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAV--NDAT 58
+ T+ ++ KLVLLGD GK+SLV RFV F + ++TIGAAF +Q L V ++ +
Sbjct: 3 IITSPSRKQGYKLVLLGDASVGKTSLVQRFVHNSFEDTVQTTIGAAFSTQDLLVPGSNRS 62
Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVM 118
+KFEIWDTAGQER+ SLAPMYYR A+ AI+VYD T+ ASF RA+ WV++L NP++V+
Sbjct: 63 IKFEIWDTAGQERFRSLAPMYYRNASCAIVVYDQTSMASFVRAQDWVKQLSMVNNPDIVV 122
Query: 119 ALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 156
ALA NK D+ D R+V A+ YA +GL F ETSAKT
Sbjct: 123 ALAANKMDVAD-REVPLATAREYAMTHGLVFCETSAKT 159
>gi|66911325|gb|AAH97051.1| Zgc:63637 protein [Danio rerio]
Length = 211
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D T++ ++W
Sbjct: 11 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 70
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R +AAA++VYDI N SF++ KW+ +++ + ++++ L GNK
Sbjct: 71 DTAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 130
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R+V+ E A+ A+E G+ ++ETSAK NV +F +A LP + P S
Sbjct: 131 TDLGDKRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKED 190
Query: 185 LMD----RPGERTASASCCS 200
++D +P E + S CS
Sbjct: 191 MIDIKLEKPPELPVTESSCS 210
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 113/163 (69%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF + +F +STIG F +++L ++ +K +IWDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE A +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLV 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 174
V+ E+ +A+A++ L+FMETSA ATNV + F E+ ++ R+
Sbjct: 135 TVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRI 177
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 120/180 (66%), Gaps = 8/180 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVN--------DIFYEIAKRLPRVQPAPNPSGM 183
V+AE+A+ A++ GL F+ETSA A N+ DI++ I+K+ Q A N +G+
Sbjct: 134 AVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKALAAQEAANSTGL 193
>gi|209735274|gb|ACI68506.1| Ras-related protein Rab-6B [Salmo salar]
Length = 208
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTGRGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 128 TDLGDKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + MD+P E + CS
Sbjct: 188 MIDIKMDKPQEPQTTEGGCS 207
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 17/204 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLR 134
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E++ ++A+ FFMETSA + NV F E+ ++ RV PA P
Sbjct: 135 AVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPAALPK 194
Query: 182 GMVLMDRPGER-----TASASCCS 200
G + G R CCS
Sbjct: 195 GQTI--NVGSRDDVSAVKKGGCCS 216
>gi|164612813|gb|ABY63655.1| Rab GTPase 2a [Euplotes octocarinatus]
Length = 222
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 107/158 (67%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K +++GD G GKS L+L+F +F + TIG F ++ + +N T+K +IWDTAGQE
Sbjct: 9 KYIIIGDTGVGKSCLLLQFTDKRFRTQHDLTIGVEFGARAVEINGETIKLQIWDTAGQES 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ S+ YYRGAA A++VYDIT + +F W+ E++ GN +MV+ L GNK+DL R
Sbjct: 69 FKSITRSYYRGAAGALLVYDITRRETFNHISTWLDEVRQNGNSDMVIILIGNKSDLDSKR 128
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 169
+V+ EE +++A+EN L FMETSAK +TNV D F E +K
Sbjct: 129 QVSTEEGKSFAKENNLIFMETSAKNSTNVEDAFLETSK 166
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 16/205 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD GKS ++ RF + +F ++TIG F ++TL + +VK +IWDTAGQER
Sbjct: 17 KVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQER 76
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ +W++EL+A + N+V+ L GNK DL D R
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQR 136
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-----------QPAPNP 180
V E+A+ +AQ+ GLFF+ETSA ATNV D F + + + Q NP
Sbjct: 137 AVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKNLAADENQSNGNP 196
Query: 181 SGM----VLMDRPGERT-ASASCCS 200
+ + +L+ PG+ +CCS
Sbjct: 197 ASLTGKKILVPGPGQVIPGKKACCS 221
>gi|440799681|gb|ELR20725.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 128
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 89/106 (83%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
N+ + KLVLLG+ G GKS+LV+RFVKG+F EFQESTIGAAF +QT+ V+D TVKFEIWD
Sbjct: 2 NRIRHHKLVLLGESGVGKSTLVIRFVKGKFNEFQESTIGAAFLTQTVVVDDTTVKFEIWD 61
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ 111
TAGQERY+SLAPMYYRG+ AI+VYDIT+ SFERAK W+ EL+
Sbjct: 62 TAGQERYNSLAPMYYRGSHGAIVVYDITSSTSFERAKMWINELREH 107
>gi|74834410|emb|CAI44538.1| rab_B23 [Paramecium tetraurelia]
Length = 206
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 8 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67
N K+VLLGD G GKSS+VLRF F EST+GAAF ++T+ VN KF+IWDTA
Sbjct: 2 NREVKVVLLGDSGVGKSSIVLRFCSDIFKVTHESTLGAAFMARTIEVNGINFKFQIWDTA 61
Query: 68 GQERYHSLAPMYYRG-AAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD 126
GQE+Y SL P+YYRG A A+IVYDIT++ SF+ K WV EL+A G ++ L GNK D
Sbjct: 62 GQEKYKSLTPLYYRGLAQVALIVYDITHKDSFDVLKSWVNELKAHGPKKIIQVLVGNKND 121
Query: 127 LLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
L++ KV+ +EA YAQ+ G TS K + ++F IA+++
Sbjct: 122 LIEDEKVSYDEANNYAQQIGASLKLTSCKENKGIQELFVSIAEQI 166
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 15/203 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 121 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 180
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 181 YRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLR 240
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPS 181
V+ E+A+ +A+ FFMETSA + NV F E+ ++ RV PA P
Sbjct: 241 AVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDPAAPPR 300
Query: 182 GMVLMDRPGERTASA----SCCS 200
G + + G+ SA CCS
Sbjct: 301 GQTI-NVGGKDDVSAVKKSGCCS 322
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 12/201 (5%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++T+ V+ TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDI Q++F+ ++W++EL+ + N+V+ L GNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA------------PN 179
V + AQ++A+EN L FMETSA A+NV F I + R+ A P
Sbjct: 134 AVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKALDQNQGPGLTPG 193
Query: 180 PSGMVLMDRPGERTASASCCS 200
P + + + E+ C S
Sbjct: 194 PRETITVSKSEEKKNGGCCAS 214
>gi|48096836|ref|XP_392533.1| PREDICTED: ras-related protein Rab-6A [Apis mellifera]
gi|380012436|ref|XP_003690289.1| PREDICTED: ras-related protein Rab-6A-like [Apis florea]
Length = 209
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF + KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN--PSG 182
DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP + N P
Sbjct: 128 TDLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPED 187
Query: 183 M---VLMDRPGERTASASCCS 200
M VL D P E +S S C+
Sbjct: 188 MQEVVLKDTPIELKSSESSCA 208
>gi|398012080|ref|XP_003859234.1| small Rab GTP binding protein, putative [Leishmania donovani]
gi|38146267|gb|AAR11496.1| Rab5b [Leishmania donovani]
gi|322497448|emb|CBZ32522.1| small Rab GTP binding protein, putative [Leishmania donovani]
Length = 211
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 112/161 (69%), Gaps = 2/161 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ G GKSS+V R +K F E ST+GA+FF T V+D T V F+IWDTAGQE
Sbjct: 22 KLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQE 81
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
R+ SLA MYYRGAAAA++V+DI + +FE+A+ W++ELQA +P ++ L GNK DL
Sbjct: 82 RFKSLASMYYRGAAAALVVFDIVSADTFEKARYWIRELQAN-SPETIVMLVGNKKDLESE 140
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
R+V+ +AQ A E G + ETSA++ V D F+ +A +L
Sbjct: 141 RQVSLADAQQCAVEMGAMYHETSARSGDGVQDAFHAVAAKL 181
>gi|348513460|ref|XP_003444260.1| PREDICTED: ras-related protein Rab-6B-like [Oreochromis niloticus]
Length = 208
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--G 182
DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S G
Sbjct: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEG 187
Query: 183 M--VLMDRPGERTASASCCS 200
M + +D+P E + CS
Sbjct: 188 MIDIKLDKPQEPPTNEGGCS 207
>gi|432877571|ref|XP_004073165.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 211
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 11 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 70
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 71 DTAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 130
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMV 184
DL D R+V+ E A+ A+E + ++ETSAK NV +F +A LP + AP S
Sbjct: 131 TDLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSAPEKSKED 190
Query: 185 LMD----RPGERTASASCCS 200
++D R E T + S CS
Sbjct: 191 MIDIKLERQPEMTVTESSCS 210
>gi|388857378|emb|CCF49052.1| probable YPT6-GTP-binding protein of the rab family [Ustilago
hordei]
Length = 218
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 111/161 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 20 KLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 79
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ A++VYDITN+ASF+ KWV +++A+ ++++ L GNK DL D R
Sbjct: 80 FRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDLSDKR 139
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 172
+VT +EA+ AQE + F+ETSAK NV +F +IA+ LP
Sbjct: 140 QVTTDEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALP 180
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 119/180 (66%), Gaps = 8/180 (4%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNKADL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKADLNHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVN--------DIFYEIAKRLPRVQPAPNPSGM 183
V+AE+AQ A++ GL F+ETSA A NV DI++ I+K+ Q A + G+
Sbjct: 134 AVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEATSNPGL 193
>gi|392567066|gb|EIW60241.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 214
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 108/161 (67%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
+K+VLLGD GK+SL+ RF+ F ++TIG F S+ + + D TV+ ++WDTAGQE
Sbjct: 19 SKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDRTVRLQLWDTAGQE 78
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
RY SL P Y R + AI+V+DITN+ SF KW+ +++++ ++++ L GNKADL D
Sbjct: 79 RYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKADLSDK 138
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
R+VT EEA A AQE + FMETSAK NV +F +IA L
Sbjct: 139 RQVTLEEANAKAQELNIMFMETSAKAGHNVKSLFKKIAMSL 179
>gi|170087436|ref|XP_001874941.1| GTP binding protein [Laccaria bicolor S238N-H82]
gi|164650141|gb|EDR14382.1| GTP binding protein [Laccaria bicolor S238N-H82]
Length = 213
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 119/192 (61%), Gaps = 4/192 (2%)
Query: 11 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70
K+VLLGD GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQE
Sbjct: 20 TKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 79
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
R+ SL P Y R ++ AI+V+DITN+ SF KW+ +++++ ++++ L GNKADL D
Sbjct: 80 RFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKADLSDK 139
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----QPAPNPSGMVLM 186
R+VT EEA A + + + FMETSAK NV +F +IA LP + Q PN V
Sbjct: 140 RQVTLEEATAKSTQLNIMFMETSAKAGHNVKSLFKKIAMSLPGMEKENQADPNTKIDVTT 199
Query: 187 DRPGERTASASC 198
GE ++ C
Sbjct: 200 PTAGEIPEASQC 211
>gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein [Plasmodium berghei]
gi|6759653|gb|AAF27979.1|AF093827_1 GTP binding protein [Plasmodium berghei]
Length = 207
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 111/174 (63%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+S++ RF+ F +STIG F S+TL +++ V+ ++WDTAGQER
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R +AAAI+VYDITN+ SFE KW+Q++ + ++++ L GNK DL D R
Sbjct: 73 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTDLADLR 132
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL 185
KVT EE AQE F ETSAK N+ +F +IA +LP ++ N V+
Sbjct: 133 KVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLENNNNHEANVV 186
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 18/206 (8%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K +++GD G GKS L+L+F +F + TIG F ++ + ++D +K +IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDDKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ S+ YYRGAA A++VYDIT + +F W+++ + + NMV+ L GNK+DL R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFTHLTTWLEDARQHSSSNMVIMLIGNKSDLESRR 127
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP-----------------RV 174
V EE +A+A+E+GL FMETSAKTA NV D F + AK + ++
Sbjct: 128 DVQKEEGEAFAREHGLIFMETSAKTAANVEDAFIDTAKCIHGKIQEGVLDVNNEANGIKL 187
Query: 175 QPAPNPSGMVLMDRP-GERTASASCC 199
P NP G + RT+ A CC
Sbjct: 188 GPHHNPVGGAYNNSNLTNRTSGAGCC 213
>gi|198430343|ref|XP_002121682.1| PREDICTED: similar to GTP-binding protein [Ciona intestinalis]
Length = 209
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 123/202 (60%), Gaps = 7/202 (3%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++W
Sbjct: 6 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 65
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK
Sbjct: 66 DTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNK 125
Query: 125 ADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAP----NP 180
DL D R+V+ EE + A+E + F+ETSAKT NV +F +A LP ++ +P N
Sbjct: 126 TDLSDKRQVSIEEGERKAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMENSPDKEKNV 185
Query: 181 SGMVLMDR---PGERTASASCC 199
V++DR P +S S C
Sbjct: 186 MDEVILDRKPQPEPTQSSESMC 207
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 118/202 (58%), Gaps = 13/202 (6%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLR 133
Query: 132 KVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV---------QPAPNPS- 181
V E+AQ+YA++ GL F+ETSA A NV F I + R+ Q N S
Sbjct: 134 AVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISSDQTTANASI 193
Query: 182 ---GMVLMDRPGERTASASCCS 200
+ + E TA CCS
Sbjct: 194 KEGQTIDVAATSESTAKKPCCS 215
>gi|146080635|ref|XP_001464048.1| putative small Rab GTP binding protein [Leishmania infantum JPCM5]
gi|134068138|emb|CAM66423.1| putative small Rab GTP binding protein [Leishmania infantum JPCM5]
Length = 211
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 112/161 (69%), Gaps = 2/161 (1%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70
KLVLLG+ G GKSS+V R +K F E ST+GA+FF T V+D T V F+IWDTAGQE
Sbjct: 22 KLVLLGESGVGKSSVVQRLMKNAFSEKLNSTVGASFFRYTCNVDDDTAVHFDIWDTAGQE 81
Query: 71 RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA 130
R+ SLA MYYRGAAAA++V+DI + +FE+A+ W++ELQA +P ++ L GNK DL
Sbjct: 82 RFKSLASMYYRGAAAALVVFDIISADTFEKARYWIRELQAN-SPETIVMLVGNKKDLESE 140
Query: 131 RKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
R+V+ +AQ A E G + ETSA++ V D F+ +A +L
Sbjct: 141 RQVSLADAQQCAVEMGAMYHETSARSGDGVQDAFHAVAAKL 181
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,789,990,892
Number of Sequences: 23463169
Number of extensions: 99599958
Number of successful extensions: 427147
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18188
Number of HSP's successfully gapped in prelim test: 6674
Number of HSP's that attempted gapping in prelim test: 388006
Number of HSP's gapped (non-prelim): 25935
length of query: 200
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 65
effective length of database: 9,191,667,552
effective search space: 597458390880
effective search space used: 597458390880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)