BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029036
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54ML6|MOG1_DICDI Probable ran guanine nucleotide release factor OS=Dictyostelium
discoideum GN=mog1 PE=3 SV=1
Length = 195
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 3 GDLYSERPLFGGAISSSFPHRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKLDVGD 62
+ + +R L+GGAI P RF DV++ R +PDHQE+F D D+S+I EL +F+ + +
Sbjct: 2 SETFEKRQLYGGAIEIDIPRRFIDVTSYRHIPDHQELFSDEKSDQSVIIELNEFQDHISN 61
Query: 63 NGSAAW----FLQDLATEQDAEGCTLLEQSGVVEAPGLRYKDLPATVTTAVGQMGRQGRE 118
+ ++D D + E P +P V A ++ +
Sbjct: 62 ANAIKHHYEVLVEDAGISTDKSVILNFRELTQAEMPNFD-ASIPKYVLLAQQKIAKFNET 120
Query: 119 AQNIVKVYLANLRLKEVGTDVLVTAYEPLLINPLSESASTVGAGLPVPATQSGFMQMSEV 178
A+N + +Y+A +RL++ TD+L+T E + + P S S + V P QS Q+
Sbjct: 121 AENTINIYMALVRLEKSKTDLLITFNEAIALAPTSSSVAVVQNLTP-SNDQSKSEQL--- 176
Query: 179 FKLAVSSFKVNDWSLF 194
F + SFK+ D+SLF
Sbjct: 177 FLTMLKSFKIKDYSLF 192
>sp|Q32PE2|MOG1_BOVIN Ran guanine nucleotide release factor OS=Bos taurus GN=RANGRF PE=2
SV=1
Length = 186
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 8 ERPLFGGAISSSFPHRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKLDVGDNGSAA 67
+ PLFGGA S++ P DVS++R VPDHQEVF D+SLI ELL+ + V +A
Sbjct: 6 DNPLFGGAFSATLPPGAIDVSDLRPVPDHQEVFCHRVTDQSLIVELLELQAHVQGEEAAR 65
Query: 68 WFLQDLATEQDAEGCTL-LEQSGVVEAPGLRYKDLPATVTTAVGQMGRQGREAQNIVKVY 126
+ +D+ Q+A + Q V+E LR A + + Q+ ++ ++ V ++
Sbjct: 66 YHFEDVGGVQEARAVQVETVQPLVLEKLALRGCCQEAWILSGQQQVAKENQQVAKYVTLH 125
Query: 127 LANLRLKEVGTDVLVTAYEPLLINPLSESASTVGAGLPVPATQSGFMQMSEVFKLAVSSF 186
A LRL + TD+L+T +P P +S L +P G F+ V+S
Sbjct: 126 QALLRLPQYQTDLLLTFNQP----PPENRSSLGPENLSIPPWSLG------DFEQLVTSL 175
Query: 187 KVNDWSLFG 195
++D ++FG
Sbjct: 176 TLHDPNIFG 184
>sp|Q9JIB0|MOG1_MOUSE Ran guanine nucleotide release factor OS=Mus musculus GN=Rangrf
PE=1 SV=1
Length = 185
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 10 PLFGGAISSSFPHRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKLDVGDNGSAAWF 69
PLFGGA S+ P DVS++R VPD+QEVF P D+SLI ELL+ + V +A +
Sbjct: 8 PLFGGAFSAILPTGAIDVSDLRPVPDNQEVFCHPVTDQSLIIELLELQAHVQGEAAARYH 67
Query: 70 LQDLATEQDAEGCTLLE-QSGVVEAPGLRYKDLPATVTTAVGQMGRQGREAQNIVKVYLA 128
+D+ Q A +L Q +E LR A + Q+ ++ ++ V ++ A
Sbjct: 68 FEDVGRVQGARAVHVLSVQPLCLENLSLRGCCQDAWSLSGKQQVAKENQQVAKDVTLHQA 127
Query: 129 NLRLKEVGTDVLVTAYEPLLINPLSESASTVGAGLPVPATQSGFMQMSEVFKLAVSSFKV 188
LRL + TD+L+T +P S S P P + S F Q+ V+S +
Sbjct: 128 LLRLPQYQTDLLLTFNQPPCH---SRSLGPENLSCP-PWSLSNFEQL-------VTSLTL 176
Query: 189 NDWSLFG 195
+D +LFG
Sbjct: 177 HDPNLFG 183
>sp|Q9HD47|MOG1_HUMAN Ran guanine nucleotide release factor OS=Homo sapiens GN=RANGRF
PE=1 SV=1
Length = 186
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 13/188 (6%)
Query: 10 PLFGGAISSSFPHRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKLDVGDNGSAAWF 69
PLFGGA S+ P DVS++R VPD+QEVF P D+SLI ELL+ + V +A +
Sbjct: 8 PLFGGAFSAILPMGAIDVSDLRPVPDNQEVFCHPVTDQSLIVELLELQAHVRGEAAARYH 67
Query: 70 LQDLATEQDAEGCTLLE-QSGVVEAPGLRYKDLPATVTTAVGQMGRQGREAQNIVKVYLA 128
+D+ Q A + Q +E LR + A V + Q+ ++ ++ V ++ A
Sbjct: 68 FEDVGGVQGARAVHVESVQPLSLENLALRGRCQEAWVLSGKQQIAKENQQVAKDVTLHQA 127
Query: 129 NLRLKEVGTDVLVTAYEPLLINPLSESASTVGAGL-PVPATQSGFMQMSEVFKLAVSSFK 187
LRL + TD+L+T +P P +S L P P + F Q+ V+S
Sbjct: 128 LLRLPQYQTDLLLTFNQP----PPDNRSSLGPENLSPAPWSLGDFEQL-------VTSLT 176
Query: 188 VNDWSLFG 195
++D ++FG
Sbjct: 177 LHDPNIFG 184
>sp|O75002|MOG1_SCHPO Nuclear import protein mog1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mog1 PE=3 SV=1
Length = 190
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 10/191 (5%)
Query: 11 LFGGAISSSFPHRFQDVSNIRQVPDHQEVFVDPSRDE-SLIFELLDFKLDVGDNGSAAWF 69
LFGGA+ + FP +F D S +RQ+PD+QEVF+ S++ ++I ELL+ D AA+
Sbjct: 4 LFGGALCADFPPKFLDASVLRQIPDNQEVFLQDSKENLTVIIELLEKIEKPFDGSVAAYH 63
Query: 70 LQDLATEQDAEGCTLLEQSGVVEA--PGLRYKDLPATVTTA---VGQMGRQGREAQNIVK 124
+A + DA + + E G+R + + V + G++ E+ V
Sbjct: 64 FNSIAFDNDASQRVIWRDKSLGEDDFEGMRSEKASGSSVQGCQRVLEKGKRNPESATNVA 123
Query: 125 VYLANLRLKEVGTDVLVTAYEPLLINPLSESASTVGAGLPVPATQSGFMQMSEVFKLAVS 184
+++ + L + TD++++ PL P + S + +P P+ QS E +
Sbjct: 124 IFVNVITLIDFQTDIVISVNAPL---PNTSSVPSSVENIP-PSDQSIVRAALETIQRVTR 179
Query: 185 SFKVNDWSLFG 195
S + D ++F
Sbjct: 180 SLVLVDKTVFA 190
>sp|P47123|MOG1_YEAST Nuclear import protein MOG1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MOG1 PE=1 SV=1
Length = 218
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 7 SERPLFGGAISSSFPHRFQDVSNIRQVPDHQEVFVDPSRD-----------ESLIFELLD 55
E L+GGAI++ P F D S +R+VPD QEV+V+ RD ES+I +LL+
Sbjct: 34 KEVELYGGAITTVVPPGFIDASTLREVPDTQEVYVNSRRDEEEFEDGLATNESIIVDLLE 93
Query: 56 FKLDVGDNGSAAWF-LQDLATEQDAEGCTLLEQSGVVEAPGLRYKDLPATVTTAVGQMGR 114
+D D A F ++DL L++ V + G ++ L V G+
Sbjct: 94 -TVDKSDLKEAWQFHVEDLTELNGTTKWEALQEDTVQQ--GTKFTGLVMEVANKWGKPDL 150
Query: 115 QGREAQNIVKVYLANLRLKEVGTDVLVTAYEPLLIN-PLSESASTVGAGLPVPATQSGFM 173
AQ +V + +A +RL + TDV+++ IN PL++ ++ + +PA
Sbjct: 151 ----AQTVV-IGVALIRLTQFDTDVVIS------INVPLTKEEASQASNKELPARCHAVY 199
Query: 174 QMSEVFKLAVSSFKVNDWSLFG 195
Q+ + V F V D SLF
Sbjct: 200 QL---LQEMVRKFHVVDTSLFA 218
>sp|Q87RR0|LIPB_VIBPA Octanoyltransferase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=lipB PE=3 SV=1
Length = 220
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 100 DLPATVTTAVGQMGRQGREAQNIVKVYLANLRLKEVGTDVLVTAYEPLLINPLS 153
D+P + GQ+ G +V +L NLR K++G LVT E L+IN L
Sbjct: 62 DIPVVQSDRGGQVTYHG--PGQLVAYFLINLRRKKLGVRDLVTTIENLVINTLK 113
>sp|A7MY97|LIPB_VIBHB Octanoyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=lipB PE=3 SV=1
Length = 220
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 100 DLPATVTTAVGQMGRQGREAQNIVKVYLANLRLKEVGTDVLVTAYEPLLINPLS 153
D+P + GQ+ G +V +L NLR K++G LVT E L+IN L
Sbjct: 62 DIPVVQSDRGGQVTYHG--PGQLVAYFLINLRRKKLGVRDLVTHIENLVINTLK 113
>sp|Q8DFD2|LIPB_VIBVU Octanoyltransferase OS=Vibrio vulnificus (strain CMCP6) GN=lipB
PE=3 SV=1
Length = 218
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 100 DLPATVTTAVGQMGRQGREAQNIVKVYLANLRLKEVGTDVLVTAYEPLLINPLS 153
D+P + GQ+ G +V +L NLR K++G LVT E L+IN L
Sbjct: 62 DIPVVQSDRGGQVTYHG--PGQLVAYFLINLRRKKLGVRDLVTTIENLVINTLK 113
>sp|Q7MN16|LIPB_VIBVY Octanoyltransferase OS=Vibrio vulnificus (strain YJ016) GN=lipB
PE=3 SV=1
Length = 218
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 100 DLPATVTTAVGQMGRQGREAQNIVKVYLANLRLKEVGTDVLVTAYEPLLINPLS 153
D+P + GQ+ G +V +L NLR K++G LVT E L+IN L
Sbjct: 62 DIPVVQSDRGGQVTYHG--PGQLVAYFLINLRRKKLGVRDLVTTIENLVINTLK 113
>sp|P54113|PUR91_YEAST Bifunctional purine biosynthesis protein ADE16 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ADE16 PE=1
SV=1
Length = 591
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 121 NIVKVYLANLRLKEVGTDVLVTAYEPLLINPLSESASTVGAGLPV-PATQSGFMQMSEVF 179
NIV V A + KEV V+ YEP +N LS+ + L + P G M+ EVF
Sbjct: 322 NIVDVATAKIISKEVSDGVIAPGYEPEALNILSKKKNGKYCILQIDPNYVPGQMESREVF 381
Query: 180 KLAVSSFKVND 190
+ + K ND
Sbjct: 382 GVTLQQ-KRND 391
>sp|B7VKE7|LIPB_VIBSL Octanoyltransferase OS=Vibrio splendidus (strain LGP32) GN=lipB
PE=3 SV=1
Length = 219
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 72 DLATEQDAEGCTLLE--------QSGVVEAPGLRYKDLPATVTTAVGQMGRQGREAQNIV 123
D T++D + L+E Q+G E L D+P + GQ+ G +V
Sbjct: 27 DERTDEDVDQIWLVEHNPVFTQGQAGKAEHV-LNAGDIPVIQSDRGGQVTYHG--PGQLV 83
Query: 124 KVYLANLRLKEVGTDVLVTAYEPLLINPLS 153
+L N+R K+ G LVT E L+IN L
Sbjct: 84 AYFLINIRRKKFGVRDLVTHIENLVINTLK 113
>sp|Q9DBS9|OSBL3_MOUSE Oxysterol-binding protein-related protein 3 OS=Mus musculus
GN=Osbpl3 PE=1 SV=2
Length = 855
Score = 30.4 bits (67), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 35 DHQEVFVDPSRDESLIFELLDFKLDVGDNGSAAWFLQDLATEQDAEGCTL---LEQSGVV 91
D QEV + PS E+ I + + D+ DN S L +L+ + D E TL LE SG
Sbjct: 421 DAQEVLLSPSSSENEISDDDSYVSDISDNLS----LDNLSNDLDNERQTLGPVLESSG-- 474
Query: 92 EAPGLRYKDLPA 103
EA R LPA
Sbjct: 475 EARSKRRTSLPA 486
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,658,753
Number of Sequences: 539616
Number of extensions: 2895705
Number of successful extensions: 7183
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7171
Number of HSP's gapped (non-prelim): 15
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)