Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>029039
MGFLAATAAASVYPSAYMELRWVRGRGKGKCELNFKPSMIPIYISTNPSDINPQELSQLF
ISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP
LLGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRM
LTSREIYDIAALCSEEERYL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029039
        (200 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006501 - symbol:AT4G19985 species:3702 "Ara...   304  2.8e-42   2
TAIR|locus:2195361 - symbol:NSI "nuclear shuttle interact...   104  0.00084   1


>TAIR|locus:505006501 [details] [associations]
            symbol:AT4G19985 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008080
            "N-acetyltransferase activity" evidence=IEA;ISS] [GO:0008152
            "metabolic process" evidence=ISS] [GO:0009965 "leaf morphogenesis"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            InterPro:IPR000182 Pfam:PF00583 PROSITE:PS51186 EMBL:CP002687
            Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0008080
            EMBL:AY054636 EMBL:AY072491 IPI:IPI00545036 RefSeq:NP_567592.1
            UniGene:At.26452 ProteinModelPortal:Q940H2 SMR:Q940H2 STRING:Q940H2
            EnsemblPlants:AT4G19985.1 GeneID:827743 KEGG:ath:AT4G19985
            TAIR:At4g19985 InParanoid:Q940H2 OMA:FFKACGF PhylomeDB:Q940H2
            ProtClustDB:CLSN2689521 Genevestigator:Q940H2 Uniprot:Q940H2
        Length = 237

 Score = 304 (112.1 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
 Identities = 58/77 (75%), Positives = 70/77 (90%)

Query:   122 LGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRML 181
             LG+L Q  VP+TPSNGQLVGFGRA SD GLTASIHD+MV+PSL++MGIG++IV RI+R+L
Sbjct:   135 LGDLFQNAVPLTPSNGQLVGFGRAYSDYGLTASIHDLMVLPSLQRMGIGKLIVNRIVRLL 194

Query:   182 TSREIYDIAALCSEEER 198
             TSR+IYDIAALC E+ER
Sbjct:   195 TSRDIYDIAALCFEDER 211

 Score = 160 (61.4 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query:    18 MELRWVRGRGKGKCELNFKPSMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRD 77
             MELRW R R K     +  P  IPIYIST   DIN +EL  L+  CNHSCNR   L  +D
Sbjct:    15 MELRWARRR-KSDNAASALPRSIPIYISTLKKDINLEELRNLYSLCNHSCNR---LSEKD 70

Query:    78 RTVEEAVDIDKL 89
               VE+ VD+ KL
Sbjct:    71 SNVEKIVDMKKL 82


>TAIR|locus:2195361 [details] [associations]
            symbol:NSI "nuclear shuttle interacting" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0008080 "N-acetyltransferase activity" evidence=IEA;ISS;IDA]
            [GO:0008152 "metabolic process" evidence=ISS] [GO:0009507
            "chloroplast" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] InterPro:IPR000182 Pfam:PF00583 PROSITE:PS51186
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009507
            GO:GO:0019048 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
            GO:GO:0008080 eggNOG:COG0454 EMBL:AC074309 UniGene:At.22659
            EMBL:AY281105 EMBL:AY086183 EMBL:BT024481 EMBL:BX818104
            IPI:IPI00527172 IPI:IPI00534635 IPI:IPI00846872 PIR:A86445
            RefSeq:NP_001077641.1 RefSeq:NP_564387.1 RefSeq:NP_973950.1
            UniGene:At.40220 HSSP:P43577 ProteinModelPortal:Q7X9V3 SMR:Q7X9V3
            STRING:Q7X9V3 PRIDE:Q7X9V3 EnsemblPlants:AT1G32070.2 GeneID:840099
            KEGG:ath:AT1G32070 TAIR:At1g32070 HOGENOM:HOG000232661
            InParanoid:Q7X9V3 OMA:QALCDKV PhylomeDB:Q7X9V3
            ProtClustDB:CLSN2688177 Genevestigator:Q7X9V3 Uniprot:Q7X9V3
        Length = 258

 Score = 104 (41.7 bits), Expect = 0.00084, P = 0.00084
 Identities = 19/59 (32%), Positives = 36/59 (61%)

Query:   138 QLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEE 196
             +L+G  RA SD    A+I D++V P  +  G+G+ +V++++R L  R+I +I+     +
Sbjct:   175 KLIGMARATSDHAFNATIWDVLVDPEYQGQGLGKALVEKLVRALLQRDIGNISLFADSQ 233


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.139   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       175   0.00078  109 3  11 22  0.37    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  145 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.60u 0.12s 13.72t   Elapsed:  00:00:01
  Total cpu time:  13.60u 0.12s 13.72t   Elapsed:  00:00:01
  Start:  Fri May 10 03:50:45 2013   End:  Fri May 10 03:50:46 2013

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