Query 029039
Match_columns 200
No_of_seqs 195 out of 2329
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 06:30:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029039.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029039hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13673 Acetyltransf_10: Acet 99.4 3.2E-13 7E-18 100.2 7.2 108 52-197 1-108 (117)
2 TIGR03827 GNAT_ablB putative b 99.4 6.4E-12 1.4E-16 108.5 14.0 117 38-198 112-229 (266)
3 PHA00673 acetyltransferase dom 99.4 1.1E-11 2.4E-16 100.2 14.1 113 49-198 13-131 (154)
4 PRK10146 aminoalkylphosphonic 99.4 4.6E-12 9.9E-17 97.4 11.2 116 40-198 2-122 (144)
5 PTZ00330 acetyltransferase; Pr 99.4 1.1E-11 2.3E-16 95.7 12.2 110 41-196 6-126 (147)
6 PLN02706 glucosamine 6-phospha 99.4 2.4E-11 5.2E-16 94.7 13.6 65 136-200 63-133 (150)
7 PRK03624 putative acetyltransf 99.3 4.1E-11 8.9E-16 90.4 13.5 113 41-198 2-114 (140)
8 PF13527 Acetyltransf_9: Acety 99.3 4.4E-11 9.5E-16 90.4 11.4 104 44-193 2-113 (127)
9 TIGR03103 trio_acet_GNAT GNAT- 99.3 9.9E-11 2.2E-15 111.1 15.7 135 12-197 60-200 (547)
10 PF00583 Acetyltransf_1: Acety 99.3 2.4E-11 5.1E-16 85.0 8.6 64 135-198 3-71 (83)
11 TIGR02382 wecD_rffC TDP-D-fuco 99.3 1.1E-10 2.5E-15 95.5 13.9 64 135-198 106-169 (191)
12 TIGR01575 rimI ribosomal-prote 99.3 2.3E-10 4.9E-15 85.5 13.1 63 135-198 38-100 (131)
13 PRK07922 N-acetylglutamate syn 99.2 2.3E-10 5E-15 92.6 13.4 60 135-194 53-112 (169)
14 PRK10975 TDP-fucosamine acetyl 99.2 3.6E-10 7.9E-15 92.5 13.1 64 135-198 109-172 (194)
15 PRK07757 acetyltransferase; Pr 99.2 1E-09 2.2E-14 85.7 13.3 59 135-193 48-106 (152)
16 PHA01807 hypothetical protein 99.1 3.6E-10 7.9E-15 91.1 9.8 64 135-198 60-127 (153)
17 PRK09491 rimI ribosomal-protei 99.1 2E-09 4.3E-14 83.6 12.7 62 135-197 47-108 (146)
18 KOG3216 Diamine acetyltransfer 99.1 1.7E-09 3.7E-14 87.1 12.4 122 40-198 2-130 (163)
19 PF13508 Acetyltransf_7: Acety 99.1 3.8E-10 8.2E-15 79.5 7.7 60 135-198 10-69 (79)
20 TIGR02406 ectoine_EctA L-2,4-d 99.1 1.3E-09 2.8E-14 87.0 11.2 64 135-198 47-112 (157)
21 PRK12308 bifunctional arginino 99.1 1E-09 2.3E-14 105.3 12.3 108 39-193 461-568 (614)
22 PRK10140 putative acetyltransf 99.1 6.2E-09 1.3E-13 81.1 14.2 119 39-198 1-125 (162)
23 KOG3396 Glucosamine-phosphate 99.1 2.4E-09 5.2E-14 84.8 11.2 66 135-200 62-133 (150)
24 KOG3139 N-acetyltransferase [G 99.0 6.6E-10 1.4E-14 90.1 7.9 64 136-199 65-131 (165)
25 PRK09831 putative acyltransfer 99.0 1E-09 2.2E-14 85.8 7.8 100 43-183 2-103 (147)
26 COG3153 Predicted acetyltransf 99.0 4.9E-09 1.1E-13 86.1 11.8 112 41-196 3-119 (171)
27 PRK10314 putative acyltransfer 99.0 9.7E-10 2.1E-14 87.8 6.5 65 135-199 55-122 (153)
28 TIGR01686 FkbH FkbH-like domai 99.0 1.4E-08 3E-13 90.0 13.8 118 42-199 187-306 (320)
29 COG1246 ArgA N-acetylglutamate 99.0 3.5E-09 7.6E-14 85.4 8.5 105 43-194 2-107 (153)
30 TIGR03448 mycothiol_MshD mycot 98.9 9.4E-09 2E-13 88.5 11.4 63 136-198 208-272 (292)
31 PRK01346 hypothetical protein; 98.9 1.2E-08 2.7E-13 92.6 12.2 109 40-194 5-121 (411)
32 TIGR01890 N-Ac-Glu-synth amino 98.9 1.4E-08 3.1E-13 93.4 11.3 60 135-194 329-389 (429)
33 cd04301 NAT_SF N-Acyltransfera 98.9 1.3E-08 2.8E-13 65.2 7.8 57 135-191 6-64 (65)
34 cd02169 Citrate_lyase_ligase C 98.9 4.9E-09 1.1E-13 92.8 7.7 61 135-200 13-73 (297)
35 COG1247 Sortase and related ac 98.9 7.8E-08 1.7E-12 78.9 13.8 119 42-198 2-127 (169)
36 PF13420 Acetyltransf_4: Acety 98.9 4.5E-08 9.7E-13 76.1 11.6 63 135-198 58-123 (155)
37 COG0456 RimI Acetyltransferase 98.9 2.9E-08 6.3E-13 78.5 10.6 61 138-198 72-138 (177)
38 PRK05279 N-acetylglutamate syn 98.9 9.4E-09 2E-13 94.8 8.8 60 135-194 341-401 (441)
39 PRK10514 putative acetyltransf 98.8 2.4E-08 5.2E-13 77.0 9.5 53 135-197 57-109 (145)
40 PLN02825 amino-acid N-acetyltr 98.8 1.4E-08 3.1E-13 95.9 9.6 61 135-195 414-475 (515)
41 TIGR03448 mycothiol_MshD mycot 98.8 2.6E-08 5.7E-13 85.8 9.4 59 135-197 53-111 (292)
42 TIGR00124 cit_ly_ligase [citra 98.7 3.7E-08 8.1E-13 88.5 8.5 61 135-200 38-98 (332)
43 PF13302 Acetyltransf_3: Acety 98.7 6.9E-07 1.5E-11 67.8 13.1 63 135-198 65-130 (142)
44 PRK10562 putative acetyltransf 98.7 2.7E-07 5.8E-12 71.7 10.7 54 135-197 55-108 (145)
45 PF13523 Acetyltransf_8: Acety 98.6 8.4E-07 1.8E-11 69.2 12.3 64 135-198 55-125 (152)
46 PRK10151 ribosomal-protein-L7/ 98.6 9.1E-07 2E-11 70.9 12.3 63 135-198 74-139 (179)
47 PRK15130 spermidine N1-acetylt 98.5 8.8E-07 1.9E-11 71.4 10.1 63 135-198 64-129 (186)
48 PRK10809 ribosomal-protein-S5- 98.5 4.1E-06 8.9E-11 68.1 14.1 63 135-198 84-150 (194)
49 KOG2488 Acetyltransferase (GNA 98.5 9.9E-07 2.1E-11 73.5 10.0 63 136-198 101-166 (202)
50 PF14542 Acetyltransf_CG: GCN5 98.4 1.7E-06 3.7E-11 62.2 7.9 58 135-194 6-63 (78)
51 PRK13688 hypothetical protein; 98.3 1.7E-06 3.7E-11 69.8 7.6 45 135-179 52-106 (156)
52 COG3981 Predicted acetyltransf 98.3 1.9E-06 4.1E-11 70.7 7.0 75 123-199 65-144 (174)
53 COG2153 ElaA Predicted acyltra 98.3 2E-06 4.2E-11 69.0 6.8 63 135-197 57-122 (155)
54 TIGR03585 PseH pseudaminic aci 98.3 8.5E-06 1.8E-10 63.1 9.9 62 135-198 58-122 (156)
55 PF13718 GNAT_acetyltr_2: GNAT 98.3 1.8E-05 4E-10 66.4 12.0 31 152-182 90-120 (196)
56 KOG3397 Acetyltransferases [Ge 98.2 3.1E-06 6.7E-11 70.0 6.7 62 135-196 64-127 (225)
57 PF08445 FR47: FR47-like prote 98.2 6.7E-06 1.4E-10 59.8 7.8 58 136-198 9-66 (86)
58 PF12568 DUF3749: Acetyltransf 98.0 2.9E-05 6.4E-10 61.0 7.5 56 136-194 46-101 (128)
59 COG2388 Predicted acetyltransf 97.9 2.9E-05 6.3E-10 58.6 6.1 59 135-194 22-80 (99)
60 TIGR01211 ELP3 histone acetylt 97.9 2E-05 4.4E-10 74.8 6.2 64 135-198 421-503 (522)
61 KOG3138 Predicted N-acetyltran 97.8 9.6E-05 2.1E-09 61.7 8.5 48 152-199 89-137 (187)
62 PF13480 Acetyltransf_6: Acety 97.8 0.00086 1.9E-08 50.5 12.7 59 135-194 78-136 (142)
63 KOG3235 Subunit of the major N 97.8 6.9E-05 1.5E-09 61.3 6.2 65 134-198 48-118 (193)
64 COG3393 Predicted acetyltransf 97.7 0.00012 2.5E-09 64.0 7.5 58 135-193 184-241 (268)
65 COG0454 WecD Histone acetyltra 97.7 4.6E-05 9.9E-10 51.5 3.3 30 158-187 87-116 (156)
66 PF01233 NMT: Myristoyl-CoA:pr 97.6 0.004 8.6E-08 50.8 14.7 122 36-192 18-150 (162)
67 COG1444 Predicted P-loop ATPas 97.4 0.0015 3.2E-08 64.6 11.6 37 153-190 532-568 (758)
68 KOG4144 Arylalkylamine N-acety 97.4 0.00012 2.6E-09 59.6 3.1 65 136-200 70-150 (190)
69 COG1670 RimL Acetyltransferase 97.4 0.00099 2.1E-08 52.0 7.8 62 136-198 76-142 (187)
70 COG3375 Uncharacterized conser 97.3 0.0031 6.7E-08 54.2 11.1 111 42-196 3-118 (266)
71 PF12746 GNAT_acetyltran: GNAT 97.2 0.0027 5.8E-08 55.7 9.6 55 135-190 172-226 (265)
72 KOG3234 Acetyltransferase, (GN 97.1 0.0015 3.2E-08 53.3 6.7 64 135-198 49-115 (173)
73 PF06852 DUF1248: Protein of u 97.1 0.006 1.3E-07 50.7 9.8 99 41-182 3-108 (181)
74 COG5628 Predicted acetyltransf 96.6 0.0055 1.2E-07 48.1 5.8 61 135-199 44-108 (143)
75 PF08444 Gly_acyl_tr_C: Aralky 96.5 0.0065 1.4E-07 45.0 5.2 60 134-198 5-64 (89)
76 COG3053 CitC Citrate lyase syn 96.3 0.013 2.9E-07 52.3 6.8 60 135-199 44-103 (352)
77 PF13880 Acetyltransf_13: ESCO 96.0 0.0069 1.5E-07 43.0 3.0 28 154-181 7-34 (70)
78 TIGR03694 exosort_acyl putativ 95.7 0.055 1.2E-06 46.5 7.9 46 151-196 110-183 (241)
79 PF04958 AstA: Arginine N-succ 95.6 0.12 2.7E-06 46.9 10.2 107 42-176 2-145 (342)
80 COG3818 Predicted acetyltransf 95.5 0.048 1.1E-06 43.6 6.3 41 150-190 82-122 (167)
81 PF05301 Mec-17: Touch recepto 95.1 0.068 1.5E-06 41.7 6.0 47 135-181 16-75 (120)
82 PRK10456 arginine succinyltran 95.1 0.24 5.1E-06 45.1 10.2 105 42-176 2-143 (344)
83 PRK13834 putative autoinducer 94.4 0.31 6.7E-06 41.0 8.7 61 135-195 61-149 (207)
84 PRK01305 arginyl-tRNA-protein 94.2 1.2 2.6E-05 38.6 12.2 54 135-191 151-206 (240)
85 KOG2779 N-myristoyl transferas 94.2 0.59 1.3E-05 42.9 10.6 115 39-188 78-203 (421)
86 cd04264 DUF619-NAGS DUF619 dom 94.1 0.14 2.9E-06 38.6 5.3 45 136-180 16-62 (99)
87 TIGR03244 arg_catab_AstA argin 93.8 0.54 1.2E-05 42.7 9.5 103 44-176 2-141 (336)
88 TIGR03245 arg_AOST_alph argini 93.7 0.54 1.2E-05 42.7 9.4 104 44-176 2-142 (336)
89 PF01853 MOZ_SAS: MOZ/SAS fami 93.6 0.19 4.2E-06 42.1 5.9 50 136-185 64-113 (188)
90 TIGR03243 arg_catab_AOST argin 93.5 0.63 1.4E-05 42.2 9.5 103 44-176 2-141 (335)
91 cd04265 DUF619-NAGS-U DUF619 d 93.0 0.41 8.9E-06 36.0 6.4 31 151-181 33-63 (99)
92 KOG4135 Predicted phosphogluco 93.0 0.25 5.4E-06 40.3 5.4 51 150-200 105-156 (185)
93 COG4552 Eis Predicted acetyltr 92.5 0.2 4.4E-06 45.8 4.8 42 151-192 69-110 (389)
94 PF04377 ATE_C: Arginine-tRNA- 92.5 0.51 1.1E-05 37.1 6.5 54 135-191 46-101 (128)
95 PF00765 Autoind_synth: Autoin 92.4 0.78 1.7E-05 37.9 7.9 61 135-195 52-139 (182)
96 COG2401 ABC-type ATPase fused 91.2 0.16 3.5E-06 47.9 2.7 35 153-187 242-276 (593)
97 PLN03238 probable histone acet 91.0 0.49 1.1E-05 42.1 5.5 51 135-185 138-188 (290)
98 COG3882 FkbH Predicted enzyme 90.9 1.4 2.9E-05 42.2 8.5 116 42-195 414-529 (574)
99 PF04768 DUF619: Protein of un 89.3 2.4 5.3E-05 34.8 7.9 93 41-182 21-118 (170)
100 KOG2036 Predicted P-loop ATPas 89.1 0.35 7.6E-06 48.0 3.2 30 153-182 615-644 (1011)
101 PTZ00064 histone acetyltransfe 88.6 0.66 1.4E-05 44.2 4.6 50 136-185 368-417 (552)
102 TIGR03019 pepcterm_femAB FemAB 88.3 7.8 0.00017 34.2 11.1 58 135-193 203-260 (330)
103 PLN03239 histone acetyltransfe 87.6 0.9 1.9E-05 41.5 4.6 50 136-185 197-246 (351)
104 KOG2747 Histone acetyltransfer 85.8 0.73 1.6E-05 42.7 3.2 60 125-184 233-292 (396)
105 PLN00104 MYST -like histone ac 84.1 0.95 2.1E-05 42.6 3.1 50 136-185 290-339 (450)
106 COG3138 AstA Arginine/ornithin 82.3 5.4 0.00012 35.8 6.9 103 43-175 3-142 (336)
107 PF13444 Acetyltransf_5: Acety 82.0 2.1 4.5E-05 31.5 3.7 24 151-174 77-100 (101)
108 KOG2696 Histone acetyltransfer 81.9 2.6 5.7E-05 38.8 5.0 41 151-191 216-257 (403)
109 COG5630 ARG2 Acetylglutamate s 81.5 7.7 0.00017 36.2 7.8 88 46-182 340-431 (495)
110 COG1243 ELP3 Histone acetyltra 81.1 1.8 3.9E-05 41.1 3.7 36 161-196 459-494 (515)
111 COG3916 LasI N-acyl-L-homoseri 81.0 12 0.00025 32.0 8.2 61 135-195 60-147 (209)
112 PF09390 DUF1999: Protein of u 80.0 31 0.00066 28.1 10.8 60 135-195 63-125 (161)
113 COG5027 SAS2 Histone acetyltra 77.0 0.81 1.7E-05 41.8 0.1 45 137-181 247-291 (395)
114 KOG4601 Uncharacterized conser 76.7 2.2 4.7E-05 37.1 2.6 44 137-180 81-136 (264)
115 COG2898 Uncharacterized conser 74.5 14 0.00031 35.7 7.7 76 118-194 380-459 (538)
116 PF02474 NodA: Nodulation prot 74.0 10 0.00022 31.7 5.8 37 150-187 83-119 (196)
117 PRK00756 acyltransferase NodA; 66.0 21 0.00045 29.8 5.9 37 149-186 82-118 (196)
118 KOG2535 RNA polymerase II elon 64.8 5.8 0.00013 36.7 2.8 35 163-197 498-533 (554)
119 PRK02983 lysS lysyl-tRNA synth 64.4 28 0.00061 36.5 8.0 62 133-195 426-487 (1094)
120 PF09924 DUF2156: Uncharacteri 63.6 32 0.0007 29.8 7.2 59 135-194 188-247 (299)
121 cd04266 DUF619-NAGS-FABP DUF61 63.1 40 0.00087 25.7 6.7 31 150-180 37-68 (108)
122 PRK04531 acetylglutamate kinas 47.3 1.6E+02 0.0035 27.3 9.2 41 141-182 300-340 (398)
123 COG2935 Putative arginyl-tRNA: 43.3 96 0.0021 27.2 6.6 54 135-191 158-213 (253)
124 COG5092 NMT1 N-myristoyl trans 42.7 92 0.002 28.6 6.6 52 135-186 141-199 (451)
125 cd03173 DUF619-like DUF619 dom 36.2 1.8E+02 0.004 21.7 7.3 43 139-181 20-62 (98)
126 PF07395 Mig-14: Mig-14; Inte 34.0 2.1E+02 0.0045 25.3 7.4 51 136-186 181-238 (264)
127 KOG3698 Hyaluronoglucosaminida 26.0 2.9E+02 0.0064 27.6 7.4 24 127-150 731-754 (891)
128 PRK15312 antimicrobial resista 21.4 1.9E+02 0.0042 26.0 4.9 51 136-186 211-268 (298)
129 PF04146 YTH: YT521-B-like dom 20.9 2.9E+02 0.0063 21.5 5.5 38 82-147 27-64 (140)
No 1
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.44 E-value=3.2e-13 Score=100.21 Aligned_cols=108 Identities=18% Similarity=0.210 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccccccccccccc
Q 029039 52 NPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQRVVP 131 (200)
Q Consensus 52 D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~~~~~~~~~ 131 (200)
|+++|.+|+.++.......+++++.+.| ....+.+++.+.+....+.+..
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~--------------------------- 50 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAW---RYSPEDLEEYLEEGSHTIFVAE--------------------------- 50 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHH---HSSHHHHHHHHCTCCCEEEEEE---------------------------
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHH---hcCHHHHHHHHHhcCCEEEEEE---------------------------
Confidence 7899999998864332111121111122 2468888888887533333322
Q ss_pred ccCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCC
Q 029039 132 VTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (200)
Q Consensus 132 ~~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~ 197 (200)
+++++|||+.+.. ..+|..++|+|+|||+|||++|++++++++++ |++.|.+.++..+
T Consensus 51 ---~~~~ivG~~~~~~----~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a 108 (117)
T PF13673_consen 51 ---EGGEIVGFAWLEP----DGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERA 108 (117)
T ss_dssp ---ETTEEEEEEEEET----CEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHH
T ss_pred ---ECCEEEEEEEEcC----CCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHH
Confidence 5899999998752 23599999999999999999999999999976 9998888755443
No 2
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.40 E-value=6.4e-12 Score=108.48 Aligned_cols=117 Identities=13% Similarity=0.243 Sum_probs=87.4
Q ss_pred CCcCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhh
Q 029039 38 SMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRL 117 (200)
Q Consensus 38 ~~~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~ 117 (200)
.++.+.||.. +..|++++.+|+.++... ||. ...+++.+++.+.....++.+.
T Consensus 112 ~~~~~~IR~a-~~~D~~~l~~L~~~v~~~---~~~---------~~~~~~~l~~~~~~~~~~~v~~-------------- 164 (266)
T TIGR03827 112 LPEGFTLRIA-TEDDADAMAALYRKVFPT---YPF---------PIHDPAYLLETMKSNVVYFGVE-------------- 164 (266)
T ss_pred CCCceEEEEC-CHHHHHHHHHHHHHHhcc---CCC---------CccCHHHHHHHhcCCcEEEEEE--------------
Confidence 3457999995 899999999999886321 321 1123556666665443333333
Q ss_pred ccccccccccccccccCCCCeEEEEEEEEeC-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecC
Q 029039 118 MVPLLGNLAQRVVPVTPSNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEE 196 (200)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~g~lVGf~~~~~d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~ 196 (200)
.+|++||++.+..+ ....++|.+++|+|+|||||||++||+++++++++.|+..+.+.+...
T Consensus 165 -----------------~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~ 227 (266)
T TIGR03827 165 -----------------DGGKIIALASAEMDPENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARAS 227 (266)
T ss_pred -----------------ECCEEEEEEEEecCCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhc
Confidence 47899999987432 334678999999999999999999999999999999999998887666
Q ss_pred CC
Q 029039 197 ER 198 (200)
Q Consensus 197 ~~ 198 (200)
+.
T Consensus 228 n~ 229 (266)
T TIGR03827 228 SY 229 (266)
T ss_pred ch
Confidence 53
No 3
>PHA00673 acetyltransferase domain containing protein
Probab=99.39 E-value=1.1e-11 Score=100.19 Aligned_cols=113 Identities=14% Similarity=0.107 Sum_probs=80.6
Q ss_pred CCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccccccccccc
Q 029039 49 SDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQR 128 (200)
Q Consensus 49 ~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~~~~~~ 128 (200)
+..|+++|.+|+.+..+...+ + + . .......+.+..+++.....+.+..
T Consensus 13 ~~~D~paI~~LLadd~l~~~r--~--d--~-~~~~~y~~af~ai~~dp~~~llVa~------------------------ 61 (154)
T PHA00673 13 ELADAPTFASLCAEYAHESAN--A--D--L-AGRAPDHHAYAGMEAAGVAHFLGVF------------------------ 61 (154)
T ss_pred cHhhHHHHHHHHHhccccccc--c--c--c-cccchhHHHHHHHHhCCCcEEEEEE------------------------
Confidence 578999999999875332111 0 0 0 0011123346666665544443332
Q ss_pred cccccCCCCeEEEEEEEEe------CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 129 VVPVTPSNGQLVGFGRAVS------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 129 ~~~~~~~~g~lVGf~~~~~------d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
++|++||++.+.. .+...+.|.+|+|+|++||||||++|++.++++++++|+..|.+.+.|+..
T Consensus 62 ------~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~ 131 (154)
T PHA00673 62 ------RGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGR 131 (154)
T ss_pred ------ECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCcc
Confidence 5899999987642 134567899999999999999999999999999999999999999988753
No 4
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.39 E-value=4.6e-12 Score=97.42 Aligned_cols=116 Identities=10% Similarity=0.114 Sum_probs=81.0
Q ss_pred cCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcc
Q 029039 40 IPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMV 119 (200)
Q Consensus 40 ~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~ 119 (200)
+.+.|+.. +..|++++.+|+....-. .++ .....+.+.+.+......+.+..
T Consensus 2 ~~~~ir~a-~~~D~~~l~~l~~~~~~~--~~~----------~~~~~~~~~~~l~~~~~~~~v~~--------------- 53 (144)
T PRK10146 2 PACELRPA-TQYDTDAVYALICELKQA--EFD----------HQAFRVGFNANLRDPNMRYHLAL--------------- 53 (144)
T ss_pred CccEEeeC-cHhhHHHHHHHHHHHhcc--cCC----------HHHHHHHHHHHhcCCCceEEEEE---------------
Confidence 45788885 899999999999865321 111 01112334444433222222221
Q ss_pred ccccccccccccccCCCCeEEEEEEEEeC-----CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 120 PLLGNLAQRVVPVTPSNGQLVGFGRAVSD-----VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 120 ~g~~~~~~~~~~~~~~~g~lVGf~~~~~d-----~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
+++++||++.+... ....++|.+++|+|+|||||||+.|++++++.+++.|+..|.|.+.
T Consensus 54 ---------------~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~ 118 (144)
T PRK10146 54 ---------------LDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTN 118 (144)
T ss_pred ---------------ECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecC
Confidence 57899999977531 1123579999999999999999999999999999999999999987
Q ss_pred cCCC
Q 029039 195 EEER 198 (200)
Q Consensus 195 ~~~~ 198 (200)
..+.
T Consensus 119 ~~n~ 122 (144)
T PRK10146 119 VKRH 122 (144)
T ss_pred CCch
Confidence 6553
No 5
>PTZ00330 acetyltransferase; Provisional
Probab=99.37 E-value=1.1e-11 Score=95.70 Aligned_cols=110 Identities=19% Similarity=0.313 Sum_probs=78.5
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhc-----CCcEEEEEecCCCCCchhhh
Q 029039 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSH-----SFVVVSVFSNLALSDDESSK 115 (200)
Q Consensus 41 ~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~-----s~~~v~~~~~~~~~~d~~~~ 115 (200)
.+.|+.. ++.|.+++.+|+....+. ++ .+.+.+...+.. ....+.+..
T Consensus 6 ~~~ir~~-~~~D~~~i~~l~~~~~~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 58 (147)
T PTZ00330 6 SLELRDL-EEGDLGSVLELLSHLTSA----PA-----------LSQEELEQIAARRRLAGVVTRVFVHS----------- 58 (147)
T ss_pred eEEEEEc-ccccHHHHHHHHHHhcCC----Cc-----------cchhHHHHHHHHHhcCCCceEEEEEe-----------
Confidence 5889995 899999999999876432 11 123334433322 111222211
Q ss_pred hhccccccccccccccccCCCCeEEEEEEEEeC------CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEE
Q 029039 116 RLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVSD------VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDI 189 (200)
Q Consensus 116 ~~~~~g~~~~~~~~~~~~~~~g~lVGf~~~~~d------~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I 189 (200)
.+|++||++.+... +....+|..++|+|+|||+|||++|++.+++++++.++..+
T Consensus 59 -------------------~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l 119 (147)
T PTZ00330 59 -------------------PTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKV 119 (147)
T ss_pred -------------------CCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEE
Confidence 57899999987532 22346899999999999999999999999999999999988
Q ss_pred EEEeecC
Q 029039 190 AALCSEE 196 (200)
Q Consensus 190 ~L~t~~~ 196 (200)
.|.+...
T Consensus 120 ~l~~n~~ 126 (147)
T PTZ00330 120 ILDCTED 126 (147)
T ss_pred EEecChH
Confidence 8876543
No 6
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.36 E-value=2.4e-11 Score=94.68 Aligned_cols=65 Identities=25% Similarity=0.493 Sum_probs=55.5
Q ss_pred CCeEEEEEEEEe------CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 029039 136 NGQLVGFGRAVS------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERYL 200 (200)
Q Consensus 136 ~g~lVGf~~~~~------d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~pF 200 (200)
++++||++.+.. ......+|..++|+|+|||||||+.|++.+++++++.|+..|.|.+.++|.+|
T Consensus 63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~ 133 (150)
T PLN02706 63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAF 133 (150)
T ss_pred CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHH
Confidence 689999987631 12345688899999999999999999999999999999999999999887654
No 7
>PRK03624 putative acetyltransferase; Provisional
Probab=99.34 E-value=4.1e-11 Score=90.37 Aligned_cols=113 Identities=20% Similarity=0.214 Sum_probs=80.7
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccc
Q 029039 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (200)
Q Consensus 41 ~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~ 120 (200)
.+.|+.. +..|.+++.+|+...+.. .++. .....+.+.+........+..
T Consensus 2 ~~~ir~~-~~~d~~~i~~l~~~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~v~~---------------- 51 (140)
T PRK03624 2 AMEIRVF-RQADFEAVIALWERCDLT----RPWN---------DPEMDIERKLNHDPSLFLVAE---------------- 51 (140)
T ss_pred ceEEEEc-ccccHHHHHHHHHhcCCC----cchh---------hHHHHHHHHhcCCCceEEEEE----------------
Confidence 3678884 889999999999887432 1111 112234444443322222211
Q ss_pred cccccccccccccCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 121 LLGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 121 g~~~~~~~~~~~~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
+++++||++.+..+. ...++..++|+|+|||+|||+.|++.+.+.+++.+++.+.+.+..+|.
T Consensus 52 --------------~~~~~vG~~~~~~~~-~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~ 114 (140)
T PRK03624 52 --------------VGGEVVGTVMGGYDG-HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDND 114 (140)
T ss_pred --------------cCCcEEEEEEeeccC-CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcH
Confidence 578999999765443 235788999999999999999999999999999999999999887764
No 8
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.29 E-value=4.4e-11 Score=90.40 Aligned_cols=104 Identities=19% Similarity=0.218 Sum_probs=73.1
Q ss_pred EEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccC-CHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccccc
Q 029039 44 ISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAV-DIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLL 122 (200)
Q Consensus 44 i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~-~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~ 122 (200)
||. .++.|.+++.+|+..+ |+... ... ........+..+.+ +.+.
T Consensus 2 iR~-~~~~d~~~i~~l~~~~------F~~~~-------~~~~~~~~~~~~~~~~~~-~~~~------------------- 47 (127)
T PF13527_consen 2 IRP-LTESDFEQIIELFNEA------FGDSE-------SPPEIWEYFRNLYGPGRC-VVAE------------------- 47 (127)
T ss_dssp EEE-E-GGGHHHHHHHHHHH------TTT-C-------HHHHHHHHHHHHHHTTEE-EEEE-------------------
T ss_pred ceE-CCHHHHHHHHHHHHHH------CCCCC-------CchhhhhhhhcccCcCcE-EEEE-------------------
Confidence 566 3789999999999999 54311 011 12234555555533 3333
Q ss_pred cccccccccccCCCCeEEEEEEEEe-----CCC--cEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 029039 123 GNLAQRVVPVTPSNGQLVGFGRAVS-----DVG--LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (200)
Q Consensus 123 ~~~~~~~~~~~~~~g~lVGf~~~~~-----d~~--~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t 193 (200)
++++|||++.+.. .+. ..++|.+++|+|+|||||||++|++++++.++++|+.-+.|.+
T Consensus 48 ------------~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~ 113 (127)
T PF13527_consen 48 ------------DDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP 113 (127)
T ss_dssp ------------ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE-
T ss_pred ------------ECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 5899999997653 222 3578999999999999999999999999999999998877766
No 9
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.28 E-value=9.9e-11 Score=111.08 Aligned_cols=135 Identities=16% Similarity=0.176 Sum_probs=95.3
Q ss_pred cCCccceeeeeecCCCCCCcccCCCCCCcCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHH
Q 029039 12 VYPSAYMELRWVRGRGKGKCELNFKPSMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCL 91 (200)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~ 91 (200)
+-||.-++|-+.+-++- .+.+.++.||....+.|++++.+||.+.++. + .+.+.+..
T Consensus 60 ~~~~~~~~~~~~~~~~~-------~~~~~g~~IR~~~~~~D~~~I~~L~~~~~~~----p------------~~~~~~~~ 116 (547)
T TIGR03103 60 LDPSHTYRLWLTQYRPA-------ARTPRGFTVRRLRGPADVDAINRLYAARGMV----P------------VRVDFVLD 116 (547)
T ss_pred cCchhceEeccccCCcC-------cCCCCCcEEEeCCChhHHHHHHHHHHhcCCC----C------------CCHHHHHH
Confidence 45777777776554332 3455679999954689999999999988663 1 12334443
Q ss_pred HHhcCCcEEEEEecCCCCCchhhhhhccccccccccccccccCCCCeEEEEEEEE------eCCCcEEEEEEEeeCcccc
Q 029039 92 ALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAV------SDVGLTASIHDIMVIPSLR 165 (200)
Q Consensus 92 ~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~~~~~~~~~~~~~~g~lVGf~~~~------~d~~~~a~I~dl~V~P~yr 165 (200)
.+......+.+.. .+++|++|||+.+. .+.....+|+.|+|+|+||
T Consensus 117 ~~~~~~~~~~vA~----------------------------~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~R 168 (547)
T TIGR03103 117 HRHSRAITYLVAE----------------------------DEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAA 168 (547)
T ss_pred HhcCCCceEEEEE----------------------------ECCCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHc
Confidence 3433222222211 01379999999753 2333346899999999999
Q ss_pred cCcHHHHHHHHHHHHHHhCCCcEEEEEeecCC
Q 029039 166 QMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (200)
Q Consensus 166 gqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~ 197 (200)
|||||++||+++++++++.|+..|.|.+..+|
T Consensus 169 g~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N 200 (547)
T TIGR03103 169 HPGVGEALVRALAEHFQSRGCAYMDLSVMHDN 200 (547)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCC
Confidence 99999999999999999999999999987766
No 10
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.28 E-value=2.4e-11 Score=85.03 Aligned_cols=64 Identities=31% Similarity=0.394 Sum_probs=57.5
Q ss_pred CCCeEEEEEEEEeCC-----CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDV-----GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~-----~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
++|++||++.+.... ....+|..++|+|+|||||||+.|++++++.+++.|+..|.+.+.+++.
T Consensus 3 ~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~ 71 (83)
T PF00583_consen 3 EDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNP 71 (83)
T ss_dssp ETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGH
T ss_pred CCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCH
Confidence 589999999876432 3688999999999999999999999999999999999999999998874
No 11
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.28 E-value=1.1e-10 Score=95.54 Aligned_cols=64 Identities=19% Similarity=0.221 Sum_probs=55.1
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
.+|++||++.+..-....++|..++|+|+|||||||++|++++++++++.|+..|.+.+..+|.
T Consensus 106 ~~g~iiG~i~l~~~~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~ 169 (191)
T TIGR02382 106 ASGDPRGYVTLRELNDTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNT 169 (191)
T ss_pred cCCeEEEEEEEEecCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCH
Confidence 5789999997753222357899999999999999999999999999999999999999887764
No 12
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.25 E-value=2.3e-10 Score=85.55 Aligned_cols=63 Identities=22% Similarity=0.351 Sum_probs=54.5
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
+++++||++.+..+. ...+|..++|+|+|||||+|++|++.+++++...++..+.+.+...+.
T Consensus 38 ~~~~~vg~~~~~~~~-~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~ 100 (131)
T TIGR01575 38 IGGKVVGYAGVQIVL-DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNI 100 (131)
T ss_pred cCCeEEEEEEEEecC-CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccH
Confidence 579999999876543 345789999999999999999999999999998899999998877653
No 13
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.24 E-value=2.3e-10 Score=92.62 Aligned_cols=60 Identities=27% Similarity=0.359 Sum_probs=51.4
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
+++++||++.+.......+.|..++|+|+|||+|||++|++++++++++.|+..+.+.+.
T Consensus 53 ~~~~iiG~~~~~~~~~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~ 112 (169)
T PRK07922 53 LDGEVVGCGALHVMWEDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF 112 (169)
T ss_pred cCCcEEEEEEEeecCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 478999999775433345789999999999999999999999999999999999887653
No 14
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.20 E-value=3.6e-10 Score=92.52 Aligned_cols=64 Identities=22% Similarity=0.262 Sum_probs=54.9
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
+++++||++.+..-.....+|..++|+|+|||||||++|++.+++++++.|+..|.+.+..+|.
T Consensus 109 ~~g~~vG~~~l~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 172 (194)
T PRK10975 109 ASGQIQGFVTLRELNDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNL 172 (194)
T ss_pred CCCCEEEEEEEEecCCCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcH
Confidence 5689999998764223357899999999999999999999999999999999999999887663
No 15
>PRK07757 acetyltransferase; Provisional
Probab=99.16 E-value=1e-09 Score=85.68 Aligned_cols=59 Identities=27% Similarity=0.302 Sum_probs=51.5
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t 193 (200)
.++++||++.+........+|..++|+|+|||+|+|++|++.+++.+.+.|+..+.+.+
T Consensus 48 ~~~~lvG~~~l~~~~~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~ 106 (152)
T PRK07757 48 EEGEIVGCCALHILWEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALT 106 (152)
T ss_pred ECCEEEEEEEEEeccCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 47899999988754445678999999999999999999999999999988998887655
No 16
>PHA01807 hypothetical protein
Probab=99.13 E-value=3.6e-10 Score=91.06 Aligned_cols=64 Identities=22% Similarity=0.337 Sum_probs=52.8
Q ss_pred CCCeEEEEEEEEeCCC-cEEE---EEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDVG-LTAS---IHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~-~~a~---I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
++|++|||+.+..... .... |..|+|+|+|||+|||++||+++++++++.|+..|.|.+..+|.
T Consensus 60 ~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~ 127 (153)
T PHA01807 60 RDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEG 127 (153)
T ss_pred ECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcH
Confidence 4899999998754322 2223 34579999999999999999999999999999999999988774
No 17
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.11 E-value=2e-09 Score=83.61 Aligned_cols=62 Identities=21% Similarity=0.380 Sum_probs=53.0
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~ 197 (200)
+++++||++.+.... ...++..++|+|+|||||||+.|++.+++.+++.++..+.+.+...|
T Consensus 47 ~~~~~vG~~~~~~~~-~~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N 108 (146)
T PRK09491 47 VNGQMAAFAITQVVL-DEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASN 108 (146)
T ss_pred ECCeEEEEEEEEeec-CceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCC
Confidence 478999999775432 24578899999999999999999999999999889999999887665
No 18
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=1.7e-09 Score=87.08 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=85.6
Q ss_pred cCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHH--HhcCCcEEEEEecCCCCCchhhhhh
Q 029039 40 IPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLA--LSHSFVVVSVFSNLALSDDESSKRL 117 (200)
Q Consensus 40 ~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~--L~~s~~~v~~~~~~~~~~d~~~~~~ 117 (200)
-.++||.. ++.|.+.+..|+.+..- |-...+ ....+.+.+++. +++......+..
T Consensus 2 ~~~~IR~a-t~~D~~~i~rLikela~----Fek~~~-----~v~~te~~l~~~~F~d~~~~~~~v~~------------- 58 (163)
T KOG3216|consen 2 DNIRIRLA-TPKDCEDILRLIKELAE----FEKLED-----QVEATEENLARDGFIDPPFKHWLVAA------------- 58 (163)
T ss_pred CceEEEec-CcccHHHHHHHHHHHHH----HHHhcc-----chhhchhhhhhhhccCCCccEEEEEE-------------
Confidence 35899995 89999999999976511 111100 012345566664 344433332221
Q ss_pred ccccccccccccccccCCCCeEEEEEEEEe-----CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 029039 118 MVPLLGNLAQRVVPVTPSNGQLVGFGRAVS-----DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAAL 192 (200)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~g~lVGf~~~~~-----d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~ 192 (200)
+...++.++||+.... .+....||.||+|.|+|||+|+|++|++.+.+++.+.|+.++...
T Consensus 59 --------------ie~~~~~~aGf~~yf~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~ 124 (163)
T KOG3216|consen 59 --------------IETSGEVVAGFALYFNNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWV 124 (163)
T ss_pred --------------EecCCCceeEEeeeecccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEE
Confidence 1114789999997753 343567999999999999999999999999999999999999988
Q ss_pred eecCCC
Q 029039 193 CSEEER 198 (200)
Q Consensus 193 t~~~~~ 198 (200)
+..=|.
T Consensus 125 vldwN~ 130 (163)
T KOG3216|consen 125 VLDWNH 130 (163)
T ss_pred Eeccch
Confidence 876553
No 19
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.10 E-value=3.8e-10 Score=79.52 Aligned_cols=60 Identities=27% Similarity=0.347 Sum_probs=50.4
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
+++++||++.+..++. ..+|..|+|+|+|||||||++||+.+++.+.. ..+.|.+.+.+.
T Consensus 10 ~~~~ivG~~~~~~~~~-~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~ 69 (79)
T PF13508_consen 10 DDGEIVGFIRLWPNED-FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAI 69 (79)
T ss_dssp ETTEEEEEEEEEETTT-EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHH
T ss_pred ECCEEEEEEEEEEcCC-EEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHH
Confidence 6899999999987765 78999999999999999999999999998843 567888765543
No 20
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.09 E-value=1.3e-09 Score=87.01 Aligned_cols=64 Identities=17% Similarity=0.356 Sum_probs=54.2
Q ss_pred CCCeEEEEEEEE--eCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAV--SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~--~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
+++++||++.+. .+.....+|..++|+|+|||||||++|++.++++++..++..|.+.+..+|.
T Consensus 47 ~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~ 112 (157)
T TIGR02406 47 EGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQ 112 (157)
T ss_pred CCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCH
Confidence 468999998653 2333457899999999999999999999999999998899999999888774
No 21
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.08 E-value=1e-09 Score=105.31 Aligned_cols=108 Identities=11% Similarity=0.062 Sum_probs=78.2
Q ss_pred CcCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhc
Q 029039 39 MIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLM 118 (200)
Q Consensus 39 ~~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~ 118 (200)
+.+++||.. +..|.+++.+|+.........+ +.+.+.+. .....++.+.
T Consensus 461 ~~gm~IR~a-~~~D~~~I~~L~~~~~~~~~~~------------~~~~~~l~---~~~~~~~Va~--------------- 509 (614)
T PRK12308 461 TSGVKVRPA-RLTDIDAIEGMVAYWAGLGENL------------PRSRNELV---RDIGSFAVAE--------------- 509 (614)
T ss_pred CCCCEEEEC-CHHHHHHHHHHHHHHHhhhccc------------ccCHHHHh---cccCcEEEEE---------------
Confidence 668999995 8999999999986532111011 11222222 2222222222
Q ss_pred cccccccccccccccCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 029039 119 VPLLGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (200)
Q Consensus 119 ~~g~~~~~~~~~~~~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t 193 (200)
++|++|||+.+........+|..++|+|+|||||||++||+++++++++.|+..|.|.+
T Consensus 510 ----------------~~g~IVG~~~l~~~~~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~ 568 (614)
T PRK12308 510 ----------------HHGEVTGCASLYIYDSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLT 568 (614)
T ss_pred ----------------ECCEEEEEEEEEEcCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEee
Confidence 57899999987654444678999999999999999999999999999999999998865
No 22
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.07 E-value=6.2e-09 Score=81.09 Aligned_cols=119 Identities=13% Similarity=0.064 Sum_probs=78.4
Q ss_pred CcCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhc-CCcEEEEEecCCCCCchhhhhh
Q 029039 39 MIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSH-SFVVVSVFSNLALSDDESSKRL 117 (200)
Q Consensus 39 ~~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~-s~~~v~~~~~~~~~~d~~~~~~ 117 (200)
|..+.||+. +..|++.+.+++.+...-. .+.. ....+.+.+...+.. +.....+..
T Consensus 1 ~~~i~lr~~-~~~D~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~------------- 57 (162)
T PRK10140 1 MSEIVIRHA-ETRDYEAIRQIHAQPEVYH-NTLQ--------VPHPSDHMWQERLADRPGIKQLVAC------------- 57 (162)
T ss_pred CCccEEEec-chhhHHHHHHHHhCccccc-cccc--------CCCcCHHHHHHHhhcCCCcEEEEEE-------------
Confidence 346889995 8999999999997542100 0000 011244555555443 222222211
Q ss_pred ccccccccccccccccCCCCeEEEEEEEEeC-C---CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHh-CCCcEEEEE
Q 029039 118 MVPLLGNLAQRVVPVTPSNGQLVGFGRAVSD-V---GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAAL 192 (200)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~g~lVGf~~~~~d-~---~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~-~gi~~I~L~ 192 (200)
++|++||++.+... . ..... ..++|+|+|||||||+.|++.+++++.+ .++..|.+.
T Consensus 58 -----------------~~~~~vG~~~~~~~~~~~~~~~~~-~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~ 119 (162)
T PRK10140 58 -----------------IDGDVVGHLTIDVQQRPRRSHVAD-FGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELT 119 (162)
T ss_pred -----------------ECCEEEEEEEEecccccccceEEE-EEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEE
Confidence 47899999987522 1 11222 2589999999999999999999999987 689999998
Q ss_pred eecCCC
Q 029039 193 CSEEER 198 (200)
Q Consensus 193 t~~~~~ 198 (200)
+..+|.
T Consensus 120 v~~~N~ 125 (162)
T PRK10140 120 VFVDNA 125 (162)
T ss_pred EEcCCH
Confidence 877663
No 23
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.06 E-value=2.4e-09 Score=84.81 Aligned_cols=66 Identities=18% Similarity=0.383 Sum_probs=58.7
Q ss_pred CCCeEEEEEEEEeC------CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 029039 135 SNGQLVGFGRAVSD------VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERYL 200 (200)
Q Consensus 135 ~~g~lVGf~~~~~d------~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~pF 200 (200)
..+++||.+.+... -....+|.||+|+++||||+||+.|+..+...++..|++.|.|.|+++|.+|
T Consensus 62 ~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~F 133 (150)
T KOG3396|consen 62 ESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKF 133 (150)
T ss_pred CcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhH
Confidence 46899999987642 2234589999999999999999999999999999999999999999999988
No 24
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.05 E-value=6.6e-10 Score=90.06 Aligned_cols=64 Identities=22% Similarity=0.256 Sum_probs=55.3
Q ss_pred CCeEEEEEEEEeCCC---cEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCCC
Q 029039 136 NGQLVGFGRAVSDVG---LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERY 199 (200)
Q Consensus 136 ~g~lVGf~~~~~d~~---~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~p 199 (200)
++..||.+....+.. ...+|..++|+++|||||||++|++.+++.++.+|+..|.|.|+..+.|
T Consensus 65 ~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~ 131 (165)
T KOG3139|consen 65 KGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLS 131 (165)
T ss_pred CCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchH
Confidence 333799987765433 3489999999999999999999999999999999999999999998764
No 25
>PRK09831 putative acyltransferase; Provisional
Probab=99.02 E-value=1e-09 Score=85.81 Aligned_cols=100 Identities=20% Similarity=0.254 Sum_probs=66.2
Q ss_pred EEEeCCCCCCHHHHHHHHHHcccCCC--CCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccc
Q 029039 43 YISTNPSDINPQELSQLFISCNHSCN--RFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (200)
Q Consensus 43 ~i~~~~~~~D~~~L~~L~~~~g~~~~--~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~ 120 (200)
.||.. ++.|.+.+.+|+.+..-... .|++ ++...|. ....+.+.+.+.+..++++.
T Consensus 2 ~ir~a-~~~D~~~l~~l~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~v~~------------------ 59 (147)
T PRK09831 2 QIRNY-QPGDFQQLCAIFIRAVTMTASQHYSP-QQIAAWA--QIDESRWKEKLAKSQVRVAV------------------ 59 (147)
T ss_pred ccccC-ChhhHHHHHHHHHHHHHHhhhhcCCH-HHHHhcc--CCCHHHHHHHHhcCceEEEE------------------
Confidence 46774 78999999999987622111 1221 1111222 12334455555544333332
Q ss_pred cccccccccccccCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHh
Q 029039 121 LLGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS 183 (200)
Q Consensus 121 g~~~~~~~~~~~~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~ 183 (200)
++|++||++.+.. .+|..++|+|+|||||||++||+++++.++.
T Consensus 60 --------------~~~~iiG~~~~~~-----~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~ 103 (147)
T PRK09831 60 --------------INAQPVGFITCIE-----HYIDMLFVDPEYTRRGVASALLKPLIKSESE 103 (147)
T ss_pred --------------ECCEEEEEEEehh-----ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh
Confidence 5899999987742 3688999999999999999999999998864
No 26
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.01 E-value=4.9e-09 Score=86.12 Aligned_cols=112 Identities=19% Similarity=0.123 Sum_probs=81.8
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccc
Q 029039 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (200)
Q Consensus 41 ~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~ 120 (200)
.+.|++. ++.|.+.+.++-.++-+ +. .+....+++++.......+..+..
T Consensus 3 ~~~ir~e-~~~d~~~i~~~~~~aF~------~~-------~e~~~v~~lR~~~~~~~~LslVA~---------------- 52 (171)
T COG3153 3 MMLIRTE-TPADIPAIEALTREAFG------PG-------REAKLVDKLREGGRPDLTLSLVAE---------------- 52 (171)
T ss_pred ccEEEec-ChhhHHHHHHHHHHHhh------cc-------hHHHHHHHHHhcCCcccceeEEEe----------------
Confidence 4778885 89999999999988832 11 133456666665533323322221
Q ss_pred cccccccccccccCCCCeEEEEEEEEe---C--CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeec
Q 029039 121 LLGNLAQRVVPVTPSNGQLVGFGRAVS---D--VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (200)
Q Consensus 121 g~~~~~~~~~~~~~~~g~lVGf~~~~~---d--~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~ 195 (200)
++|++||.+++.. . .....-+.-++|+|+|||||||++||+..++.++..|...+.+..++
T Consensus 53 --------------d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGdp 118 (171)
T COG3153 53 --------------DDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGDP 118 (171)
T ss_pred --------------eCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCc
Confidence 5699999997752 2 22334578999999999999999999999999999999999988766
Q ss_pred C
Q 029039 196 E 196 (200)
Q Consensus 196 ~ 196 (200)
.
T Consensus 119 ~ 119 (171)
T COG3153 119 T 119 (171)
T ss_pred c
Confidence 4
No 27
>PRK10314 putative acyltransferase; Provisional
Probab=98.99 E-value=9.7e-10 Score=87.82 Aligned_cols=65 Identities=17% Similarity=0.193 Sum_probs=53.7
Q ss_pred CCCeEEEEEEEEeCC--CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhC-CCcEEEEEeecCCCC
Q 029039 135 SNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR-EIYDIAALCSEEERY 199 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~--~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~-gi~~I~L~t~~~~~p 199 (200)
+++++||++++.... ....+|..|+|+|+|||+|||++||+++++.++.. +...|.|.+...+.+
T Consensus 55 ~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~ 122 (153)
T PRK10314 55 KNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQN 122 (153)
T ss_pred ECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHH
Confidence 578999999998642 23578999999999999999999999999999764 677888887654433
No 28
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.97 E-value=1.4e-08 Score=90.04 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=86.7
Q ss_pred eEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccc
Q 029039 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (200)
Q Consensus 42 i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g 121 (200)
++|+.. ++.|++.+.+|...++. |... ..+.+.+.+++.+.+...++.....
T Consensus 187 ~~Ir~a-~~~Dl~ri~~L~~~tnq----fn~~-------~~~~s~~~i~~~l~~~~~~~~~~~d---------------- 238 (320)
T TIGR01686 187 LNISKN-DEQNVQRVEELLGRTNQ----FNAT-------YTRLNQEDVAQHMQKEEIVTVSMSD---------------- 238 (320)
T ss_pred EEEEEC-ChhhhHHHHHHHHhHHh----hhcc-------CccCCHHHHHHHhcCCCEEEEEEEe----------------
Confidence 789995 89999999999987743 3210 1234567888888765332222110
Q ss_pred ccccccccccccCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeec--CCCC
Q 029039 122 LGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE--EERY 199 (200)
Q Consensus 122 ~~~~~~~~~~~~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~--~~~p 199 (200)
.-.++.+||++.+... ....+|..++|+|.+||||||++||+.+++.+++.|+..|.|...+ .|.|
T Consensus 239 -----------~~gd~givG~~~~~~~-~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~ 306 (320)
T TIGR01686 239 -----------RFGDSGIIGIFVFEKK-EGNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMP 306 (320)
T ss_pred -----------cCCCCceEEEEEEEec-CCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchH
Confidence 0026789999977543 3357899999999999999999999999999999999999997753 4544
No 29
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=98.95 E-value=3.5e-09 Score=85.35 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=80.5
Q ss_pred EEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccccc
Q 029039 43 YISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLL 122 (200)
Q Consensus 43 ~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~ 122 (200)
+||.+ +..|.+.|.+|....+...- . -+++.+.+...+..- .+..
T Consensus 2 ~iR~A-~~~Di~~I~~Li~~~~~~gi-l-----------~~rs~~~le~~i~dF--~i~E-------------------- 46 (153)
T COG1246 2 QIRKA-RISDIPAILELIRPLELQGI-L-----------LRRSREQLEEEIDDF--TIIE-------------------- 46 (153)
T ss_pred ceeec-cccchHHHHHHHHHHhhccc-c-----------chhhHHHHHHHHhhh--eeee--------------------
Confidence 57774 88999999999987643100 0 123455555544432 2332
Q ss_pred cccccccccccCCCCeEEEEEEEEe-CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 123 GNLAQRVVPVTPSNGQLVGFGRAVS-DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 123 ~~~~~~~~~~~~~~g~lVGf~~~~~-d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
.+|++||++.+.. .....+.|..|+|||+|||+|+|.+|+++++..+++.|++.+.+.|+
T Consensus 47 ------------~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt 107 (153)
T COG1246 47 ------------RDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT 107 (153)
T ss_pred ------------eCCcEEEEEeecccCccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec
Confidence 5899999998873 55667899999999999999999999999999999999999999885
No 30
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.94 E-value=9.4e-09 Score=88.55 Aligned_cols=63 Identities=19% Similarity=0.275 Sum_probs=52.3
Q ss_pred CCeEEEEEEEEe--CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 136 NGQLVGFGRAVS--DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 136 ~g~lVGf~~~~~--d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
++++|||+.... +.....+|..+.|+|+|||||||++|++++++++++.|+..|.+.+..+|.
T Consensus 208 ~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~ 272 (292)
T TIGR03448 208 PGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNE 272 (292)
T ss_pred CCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCH
Confidence 689999974432 222346788899999999999999999999999999999999999987763
No 31
>PRK01346 hypothetical protein; Provisional
Probab=98.93 E-value=1.2e-08 Score=92.56 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=77.0
Q ss_pred cCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcc
Q 029039 40 IPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMV 119 (200)
Q Consensus 40 ~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~ 119 (200)
..+.||.. +..|.+++.+|+..+ |+.. + .....+.+...+..... +.++
T Consensus 5 ~~~~iR~~-~~~D~~~i~~L~~~~------f~~~-----~--~~~~~~~~~~~~~~~~~-~va~---------------- 53 (411)
T PRK01346 5 MAITIRTA-TEEDWPAWFRAAATG------FGDS-----P--SDEELEAWRALVEPDRT-LGAF---------------- 53 (411)
T ss_pred CCceeecC-CHHHHHHHHHHHHHH------cCCC-----C--ChHHHHHHHHhcCcCCe-EEEE----------------
Confidence 35789985 788999999999876 3210 0 01122333333333322 3332
Q ss_pred ccccccccccccccCCCCeEEEEEEEEeC------C--CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEE
Q 029039 120 PLLGNLAQRVVPVTPSNGQLVGFGRAVSD------V--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAA 191 (200)
Q Consensus 120 ~g~~~~~~~~~~~~~~~g~lVGf~~~~~d------~--~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L 191 (200)
+++++||++.+... + ....+|..|+|+|+|||||||++||+++++.++++|+..+.|
T Consensus 54 ---------------~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L 118 (411)
T PRK01346 54 ---------------DGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAAL 118 (411)
T ss_pred ---------------ECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEE
Confidence 57899999987531 2 135789999999999999999999999999999999888887
Q ss_pred Eee
Q 029039 192 LCS 194 (200)
Q Consensus 192 ~t~ 194 (200)
.+.
T Consensus 119 ~~~ 121 (411)
T PRK01346 119 TAS 121 (411)
T ss_pred ECC
Confidence 754
No 32
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=98.89 E-value=1.4e-08 Score=93.42 Aligned_cols=60 Identities=15% Similarity=0.202 Sum_probs=51.7
Q ss_pred CCCeEEEEEEEEeC-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 135 SNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 135 ~~g~lVGf~~~~~d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
+++++||++.+... ....++|..++|+|+|||||+|++||++++++++++|+..+.+.+.
T Consensus 329 ~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~ 389 (429)
T TIGR01890 329 HDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT 389 (429)
T ss_pred ECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec
Confidence 47899999987643 2346789999999999999999999999999999999998877653
No 33
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.88 E-value=1.3e-08 Score=65.23 Aligned_cols=57 Identities=30% Similarity=0.465 Sum_probs=50.5
Q ss_pred CCCeEEEEEEEEeCC--CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEE
Q 029039 135 SNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAA 191 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~--~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L 191 (200)
.++++||++.+.... ....+|..++|+|+|||+|+|++|+..+++++.+.++..+.+
T Consensus 6 ~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 6 DDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred cCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 478999999887654 356889999999999999999999999999999889888876
No 34
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=98.88 E-value=4.9e-09 Score=92.82 Aligned_cols=61 Identities=15% Similarity=0.311 Sum_probs=54.3
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERYL 200 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~pF 200 (200)
+++++||++++.. ..|..|+|+|+|||||||++||++++++++++|+..+.|.+...+.+|
T Consensus 13 ~~~~iVG~~~l~~-----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~f 73 (297)
T cd02169 13 DAGELIATGSIAG-----NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKF 73 (297)
T ss_pred ECCEEEEEEEecc-----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHH
Confidence 5799999998853 258999999999999999999999999999999999999998776554
No 35
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=98.87 E-value=7.8e-08 Score=78.93 Aligned_cols=119 Identities=13% Similarity=0.193 Sum_probs=82.7
Q ss_pred eEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhc---CCcEEEEEecCCCCCchhhhhhc
Q 029039 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSH---SFVVVSVFSNLALSDDESSKRLM 118 (200)
Q Consensus 42 i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~---s~~~v~~~~~~~~~~d~~~~~~~ 118 (200)
+.|+.. +..|++.+.++|+..--++. -.|...+.+.+.+.+.+.. ..+.+.+..
T Consensus 2 ~~ir~~-~~~Dl~~I~~IY~~~v~~~~--------a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~-------------- 58 (169)
T COG1247 2 MEIRPA-TAADLEAILEIYNGAVENTA--------ATFEEDPVSLEERAAWFSGRTRDGYPVVVAE-------------- 58 (169)
T ss_pred cEEecC-hHHhHHHHHHHHHHhhhcce--------EEEeccCCCHHHHHHHHHhcccCCceEEEEE--------------
Confidence 578885 89999999999987532211 0112345677777765542 112333321
Q ss_pred cccccccccccccccCCCCeEEEEEEEEeC----CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 119 VPLLGNLAQRVVPVTPSNGQLVGFGRAVSD----VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 119 ~~g~~~~~~~~~~~~~~~g~lVGf~~~~~d----~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
+++|+++|++.+.+- ......-..|+|+|++||+|||++|++++++.+..+|++.+.-...
T Consensus 59 ---------------~~~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~ 123 (169)
T COG1247 59 ---------------EEDGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIE 123 (169)
T ss_pred ---------------cCCCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEc
Confidence 156999999987642 2222334689999999999999999999999999999988776666
Q ss_pred cCCC
Q 029039 195 EEER 198 (200)
Q Consensus 195 ~~~~ 198 (200)
.+|.
T Consensus 124 ~~n~ 127 (169)
T COG1247 124 SDNL 127 (169)
T ss_pred CCCc
Confidence 6553
No 36
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=98.86 E-value=4.5e-08 Score=76.12 Aligned_cols=63 Identities=24% Similarity=0.374 Sum_probs=50.7
Q ss_pred CCCeEEEEEEEEe-CCC-cEEEEEEEeeCcccccCcHHHHHHHHHHHHH-HhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVS-DVG-LTASIHDIMVIPSLRQMGIGRMIVQRILRML-TSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~-d~~-~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~-~~~gi~~I~L~t~~~~~ 198 (200)
.+|++||++.+.. +.. ..+.+ .+.|.|+||++|+|+.|++.+++.+ ++.|++.|.+.+-.+|.
T Consensus 58 ~~g~iiG~~~~~~~~~~~~~~~~-~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~ 123 (155)
T PF13420_consen 58 EDGKIIGYVSLRDIDPYNHTAEL-SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNE 123 (155)
T ss_dssp CTTEEEEEEEEEESSSGTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-H
T ss_pred cCCcEEEEEEEEeeeccCCEEEE-eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCH
Confidence 4899999998863 322 34444 4888899999999999999999999 89999999998877664
No 37
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=98.85 E-value=2.9e-08 Score=78.54 Aligned_cols=61 Identities=28% Similarity=0.367 Sum_probs=53.1
Q ss_pred eEEEEEEEE-eCCCc----EEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCC-cEEEEEeecCCC
Q 029039 138 QLVGFGRAV-SDVGL----TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREI-YDIAALCSEEER 198 (200)
Q Consensus 138 ~lVGf~~~~-~d~~~----~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi-~~I~L~t~~~~~ 198 (200)
+++||+... .++.. .++|..|+|+|+|||+|||++|++++++.+.++++ ..+.|.+..+|.
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~ 138 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNE 138 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCh
Confidence 699999874 44422 67999999999999999999999999999998887 899999998875
No 38
>PRK05279 N-acetylglutamate synthase; Validated
Probab=98.85 E-value=9.4e-09 Score=94.83 Aligned_cols=60 Identities=17% Similarity=0.239 Sum_probs=51.5
Q ss_pred CCCeEEEEEEEEeC-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 135 SNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 135 ~~g~lVGf~~~~~d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
+++++||++.+... ....++|..|+|+|+|||||||++||++++++++++|+..+.+.+.
T Consensus 341 ~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~~ 401 (441)
T PRK05279 341 RDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLTT 401 (441)
T ss_pred ECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 57899999976532 2346789999999999999999999999999999999999887653
No 39
>PRK10514 putative acetyltransferase; Provisional
Probab=98.84 E-value=2.4e-08 Score=76.98 Aligned_cols=53 Identities=26% Similarity=0.488 Sum_probs=41.8
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~ 197 (200)
+++++||++.+. + .++..++|+|+|||||||++|++.+.+.++ ++.+.+...|
T Consensus 57 ~~~~~iG~~~~~-~----~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~-----~i~~~v~~~N 109 (145)
T PRK10514 57 ERDQPVGFMLLS-G----GHMEALFVDPDVRGCGVGRMLVEHALSLHP-----ELTTDVNEQN 109 (145)
T ss_pred cCCcEEEEEEEe-c----CcEeEEEECHHhccCCHHHHHHHHHHHhcc-----ccEEEeecCC
Confidence 478999998763 2 246789999999999999999999998643 4566666554
No 40
>PLN02825 amino-acid N-acetyltransferase
Probab=98.84 E-value=1.4e-08 Score=95.88 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=52.9
Q ss_pred CCCeEEEEEEEEeC-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeec
Q 029039 135 SNGQLVGFGRAVSD-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (200)
Q Consensus 135 ~~g~lVGf~~~~~d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~ 195 (200)
.+|++||++.+... ....++|..|+|+|+|||+|+|++||++++++++++|++.|.|.++.
T Consensus 414 ~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt~ 475 (515)
T PLN02825 414 REGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTTR 475 (515)
T ss_pred ECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCc
Confidence 58999999976532 23467899999999999999999999999999999999999998753
No 41
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.80 E-value=2.6e-08 Score=85.80 Aligned_cols=59 Identities=20% Similarity=0.410 Sum_probs=46.4
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~ 197 (200)
+++++||++.+........+|..|+|+|+|||||||++||+++++.+. ..+.|.+..+|
T Consensus 53 ~~~~~vG~~~~~~~~~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n 111 (292)
T TIGR03448 53 DSDPIVGYANLVPARGTDPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDL 111 (292)
T ss_pred ECCEEEEEEEEEcCCCCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCC
Confidence 578999999876543334679999999999999999999999999865 34566555443
No 42
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.73 E-value=3.7e-08 Score=88.47 Aligned_cols=61 Identities=15% Similarity=0.257 Sum_probs=54.2
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERYL 200 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~pF 200 (200)
++|+|||++.+..+ .|..|+|+|+|||+|||++||+++++.++++|+..+.|.|.+.+.+|
T Consensus 38 ~~~~lVg~g~l~g~-----~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~f 98 (332)
T TIGR00124 38 EDEEIIGCGGIAGN-----VIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAAL 98 (332)
T ss_pred ECCEEEEEEEEecC-----EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHH
Confidence 57899999988532 58899999999999999999999999999999999999998776543
No 43
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=98.69 E-value=6.9e-07 Score=67.85 Aligned_cols=63 Identities=19% Similarity=0.239 Sum_probs=52.4
Q ss_pred CCCeEEEEEEEE-e-CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHH-HhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAV-S-DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRML-TSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~-~-d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~-~~~gi~~I~L~t~~~~~ 198 (200)
+++++||++.+. . .....+.|. +.|.|+|||+|+|+.+++.+++++ .+.|+..|...+.++|.
T Consensus 65 ~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~ 130 (142)
T PF13302_consen 65 DDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNE 130 (142)
T ss_dssp TTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-H
T ss_pred cCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCH
Confidence 457899999883 3 234566765 889999999999999999999999 57899999999998875
No 44
>PRK10562 putative acetyltransferase; Provisional
Probab=98.68 E-value=2.7e-07 Score=71.70 Aligned_cols=54 Identities=19% Similarity=0.399 Sum_probs=42.9
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~ 197 (200)
+++++||++.+... ..|..++|+|+|||+|+|++|++.+++. +..+.+.+..+|
T Consensus 55 ~~~~~iG~~~~~~~----~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N 108 (145)
T PRK10562 55 EDGKLLGFVSVLEG----RFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKN 108 (145)
T ss_pred ECCEEEEEEEEeec----cEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCC
Confidence 46899999987533 3588899999999999999999999874 345677776655
No 45
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=98.63 E-value=8.4e-07 Score=69.20 Aligned_cols=64 Identities=20% Similarity=0.367 Sum_probs=51.0
Q ss_pred CCCeEEEEEEEEe-----C-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhC-CCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVS-----D-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR-EIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~-----d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~-gi~~I~L~t~~~~~ 198 (200)
.+|+++||+.+.. + ......++.++|+|+|||||+|+++++.+++.+.+. ++..|.+.+..+|.
T Consensus 55 ~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~ 125 (152)
T PF13523_consen 55 DDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNT 125 (152)
T ss_dssp ETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-H
T ss_pred ECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCH
Confidence 5899999997753 0 234556888999999999999999999999999865 79999999988874
No 46
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=98.61 E-value=9.1e-07 Score=70.93 Aligned_cols=63 Identities=17% Similarity=0.206 Sum_probs=50.6
Q ss_pred CCCeEEEEEEEEe-C-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHh-CCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVS-D-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~-d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~-~gi~~I~L~t~~~~~ 198 (200)
.++++||++.+.. + ....+.|. +.|+|+|||||+|+.+++.+++++.+ .++++|.+.+..+|.
T Consensus 74 ~~~~~iG~~~l~~~~~~~~~~~ig-~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~ 139 (179)
T PRK10151 74 KEDELIGVLSFNRIEPLNKTAYIG-YWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNP 139 (179)
T ss_pred ECCEEEEEEEEEeeccCCCceEEE-EEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCH
Confidence 4789999997653 2 22345664 57899999999999999999999974 589999999888774
No 47
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=98.53 E-value=8.8e-07 Score=71.42 Aligned_cols=63 Identities=14% Similarity=0.274 Sum_probs=50.7
Q ss_pred CCCeEEEEEEEEe-CC-CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHH-hCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVS-DV-GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT-SREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~-d~-~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~-~~gi~~I~L~t~~~~~ 198 (200)
.+|++||++.+.. +. ...+.+ .+.|+|+|||+|+|+++++.+++.+. ..++++|.+.+..+|.
T Consensus 64 ~~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~ 129 (186)
T PRK15130 64 CDGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENE 129 (186)
T ss_pred ECCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCH
Confidence 4789999997653 21 123344 69999999999999999999999997 4699999999987763
No 48
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=98.52 E-value=4.1e-06 Score=68.06 Aligned_cols=63 Identities=10% Similarity=0.092 Sum_probs=50.9
Q ss_pred CCCeEEEEEEEEe-CC-C-cEEEEEEEeeCcccccCcHHHHHHHHHHHHHHh-CCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVS-DV-G-LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~-d~-~-~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~-~gi~~I~L~t~~~~~ 198 (200)
+++++||.+.+.. +. . ..+. -.+.|+|+|||||+|+.+++.+++++.+ .|+++|.+.+..+|.
T Consensus 84 ~~~~~iG~i~l~~~~~~~~~~~e-ig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~ 150 (194)
T PRK10809 84 DEKEIIGVANFSNVVRGSFHACY-LGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNK 150 (194)
T ss_pred CCCeEEEEEEEEeecCCCeeeEE-EEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCH
Confidence 4679999998753 21 2 2233 3578999999999999999999999975 699999999998875
No 49
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=98.50 E-value=9.9e-07 Score=73.51 Aligned_cols=63 Identities=21% Similarity=0.302 Sum_probs=53.8
Q ss_pred CCeEEEEEEEEe--C-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 136 NGQLVGFGRAVS--D-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 136 ~g~lVGf~~~~~--d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
.+++|||..... | +..+.|+..|=|.++|||+|||+.||+.+...+.....+.|+|++=.+|.
T Consensus 101 ~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~ 166 (202)
T KOG2488|consen 101 KSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENI 166 (202)
T ss_pred CCceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccc
Confidence 449999997643 2 33578999999999999999999999999999998888999999877764
No 50
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.40 E-value=1.7e-06 Score=62.17 Aligned_cols=58 Identities=24% Similarity=0.353 Sum_probs=47.3
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
.+|+.+|++....+ .....|....|.|++||||||++|++++++.++++|. +|...|+
T Consensus 6 ~~g~~~a~l~Y~~~-~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~-kv~p~C~ 63 (78)
T PF14542_consen 6 DDGEEIAELTYRED-GGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGL-KVVPTCS 63 (78)
T ss_dssp SSTTEEEEEEEEES-SSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT--EEEETSH
T ss_pred ECCEEEEEEEEEeC-CCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC-EEEEECH
Confidence 46889999988664 4567899999999999999999999999999999885 5555553
No 51
>PRK13688 hypothetical protein; Provisional
Probab=98.35 E-value=1.7e-06 Score=69.83 Aligned_cols=45 Identities=18% Similarity=0.191 Sum_probs=35.6
Q ss_pred CCCeEEEEEEEEe-C---------CCcEEEEEEEeeCcccccCcHHHHHHHHHHH
Q 029039 135 SNGQLVGFGRAVS-D---------VGLTASIHDIMVIPSLRQMGIGRMIVQRILR 179 (200)
Q Consensus 135 ~~g~lVGf~~~~~-d---------~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~ 179 (200)
+++++||++.+.. + ....++|..|+|+|+|||||||++|++.+.+
T Consensus 52 ~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~~ 106 (156)
T PRK13688 52 YGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAKS 106 (156)
T ss_pred ECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHH
Confidence 5789999987642 2 1245689999999999999999999986543
No 52
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.31 E-value=1.9e-06 Score=70.69 Aligned_cols=75 Identities=24% Similarity=0.269 Sum_probs=57.1
Q ss_pred cccccccccccCCCCeEEEEEEEEe---CCCc--EEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCC
Q 029039 123 GNLAQRVVPVTPSNGQLVGFGRAVS---DVGL--TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEE 197 (200)
Q Consensus 123 ~~~~~~~~~~~~~~g~lVGf~~~~~---d~~~--~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~ 197 (200)
|.+..+++.+. +++++||++.+-. +.-. -.+| .-.|+|+.||+|+|+.+++..++.|++.||..|.++|+.+|
T Consensus 65 ~V~~~~y~~v~-~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN 142 (174)
T COG3981 65 WVPASTYWAVD-EDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDN 142 (174)
T ss_pred ceeceeEEEEe-cCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCC
Confidence 34444555554 5899999997752 1100 0123 33699999999999999999999999999999999999998
Q ss_pred CC
Q 029039 198 RY 199 (200)
Q Consensus 198 ~p 199 (200)
.+
T Consensus 143 ~A 144 (174)
T COG3981 143 IA 144 (174)
T ss_pred ch
Confidence 64
No 53
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.30 E-value=2e-06 Score=69.05 Aligned_cols=63 Identities=19% Similarity=0.291 Sum_probs=50.0
Q ss_pred CCCeEEEEEEEEeCCC--cEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC-CcEEEEEeecCC
Q 029039 135 SNGQLVGFGRAVSDVG--LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE-IYDIAALCSEEE 197 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~--~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g-i~~I~L~t~~~~ 197 (200)
.+|++|+++|+...+. ..+.|+.|+|+|++||+|+|++||..+++.+.... -+.+.|.+....
T Consensus 57 ~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahL 122 (155)
T COG2153 57 PDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHL 122 (155)
T ss_pred CCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHH
Confidence 5899999999985433 23569999999999999999999999999997542 355666665443
No 54
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=98.28 E-value=8.5e-06 Score=63.14 Aligned_cols=62 Identities=13% Similarity=0.076 Sum_probs=49.7
Q ss_pred CCCeEEEEEEEEeCC--CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHh-CCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~--~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~-~gi~~I~L~t~~~~~ 198 (200)
.+|++||++.+.... .....+. ++++|.+| +|||+.+++.+++++.+ .++..|.+.+...|.
T Consensus 58 ~~g~~vG~~~~~~~~~~~~~~~~g-~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~ 122 (156)
T TIGR03585 58 QESRPIGVISFTDINLVHKSAFWG-IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNN 122 (156)
T ss_pred ECCEEEEEEEEEecChhhCeEEEE-EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCH
Confidence 579999999876422 2334553 55999999 99999999999999974 699999999988764
No 55
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.26 E-value=1.8e-05 Score=66.39 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=25.9
Q ss_pred EEEEEEEeeCcccccCcHHHHHHHHHHHHHH
Q 029039 152 TASIHDIMVIPSLRQMGIGRMIVQRILRMLT 182 (200)
Q Consensus 152 ~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~ 182 (200)
.+.|..|+|||++|++|+|++|++.+.+++.
T Consensus 90 g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~ 120 (196)
T PF13718_consen 90 GARIVRIAVHPDLQRMGYGSRLLQQLEQYAE 120 (196)
T ss_dssp EEEEEEEEE-CCC-SSSHHHHHHHHHHHT--
T ss_pred ceeEEEEEEChhhhcCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999993
No 56
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.23 E-value=3.1e-06 Score=70.02 Aligned_cols=62 Identities=11% Similarity=0.303 Sum_probs=53.8
Q ss_pred CCCeEEEEEEEE--eCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecC
Q 029039 135 SNGQLVGFGRAV--SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEE 196 (200)
Q Consensus 135 ~~g~lVGf~~~~--~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~ 196 (200)
...++||..++. .+......+..|+|+.++||+|.||.||+.++.+++..|++.+.|.+.+.
T Consensus 64 ~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ 127 (225)
T KOG3397|consen 64 ENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQ 127 (225)
T ss_pred cccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccc
Confidence 568999999875 23344567899999999999999999999999999999999999988765
No 57
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=98.23 E-value=6.7e-06 Score=59.82 Aligned_cols=58 Identities=21% Similarity=0.284 Sum_probs=43.7
Q ss_pred CCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 136 ~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
.+++++.+....+ ..|..|.|+|+|||||+|+.|++.+.+.+.++|. ...+.+..+|.
T Consensus 9 ~~~l~~~~~~~~~----g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~-~~~l~v~~~N~ 66 (86)
T PF08445_consen 9 LVALVAWIIRSDD----GEIGGVYTLPEHRRRGLGSALVAALARELLERGK-TPFLYVDADNE 66 (86)
T ss_dssp CEEEEEEEEESCT----CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS-EEEEEEETT-H
T ss_pred ccceeeEeeeCCC----cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCC-cEEEEEECCCH
Confidence 4566665533222 4799999999999999999999999999998886 45677776663
No 58
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=97.99 E-value=2.9e-05 Score=60.99 Aligned_cols=56 Identities=23% Similarity=0.320 Sum_probs=43.3
Q ss_pred CCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 136 ~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
|++++|.+.+..++. .+.|.+++|++-=||||||+.|++++.+.+. ++....+..+
T Consensus 46 NdRlLgAv~v~~~~~-~~~L~~l~VRevTRrRGVG~yLlee~~rq~p--~i~~w~l~~~ 101 (128)
T PF12568_consen 46 NDRLLGAVKVTISGQ-QAELSDLCVREVTRRRGVGLYLLEEVLRQLP--DIKHWWLADE 101 (128)
T ss_dssp TTEEEEEEEEEEETT-EEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--T
T ss_pred chheeeeEEEEEcCc-ceEEeeEEEeeccccccHHHHHHHHHHHHCC--CCcEEEEecC
Confidence 899999999887644 7899999999999999999999999999884 6666666543
No 59
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.92 E-value=2.9e-05 Score=58.58 Aligned_cols=59 Identities=24% Similarity=0.325 Sum_probs=48.9
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
++|+.+|++....-+.....|..-.|.+++||||||++|++++++.+++.|.+ |.=.|+
T Consensus 22 ~~G~~~~e~~y~~~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~k-iiP~Cs 80 (99)
T COG2388 22 DEGEVIGEATYYDRGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLK-IIPLCS 80 (99)
T ss_pred cCCcEEEEEEEecCCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCe-Ecccch
Confidence 67888999876655556788999999999999999999999999999998864 443443
No 60
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=97.90 E-value=2e-05 Score=74.83 Aligned_cols=64 Identities=20% Similarity=0.227 Sum_probs=50.3
Q ss_pred CCCeEEEEEEEEeCCC--------cEEEEEEEe-----------eCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeec
Q 029039 135 SNGQLVGFGRAVSDVG--------LTASIHDIM-----------VIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~--------~~a~I~dl~-----------V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~ 195 (200)
.++.+|||.++..... ..+.|.+|. ++|+|||+|||++||+++++.+++.|+..|.|.+..
T Consensus 421 ~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~ 500 (522)
T TIGR01211 421 KNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGI 500 (522)
T ss_pred CCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCc
Confidence 4679999998863321 245666666 459999999999999999999999999999997755
Q ss_pred CCC
Q 029039 196 EER 198 (200)
Q Consensus 196 ~~~ 198 (200)
.++
T Consensus 501 ~A~ 503 (522)
T TIGR01211 501 GVR 503 (522)
T ss_pred hHH
Confidence 443
No 61
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=97.84 E-value=9.6e-05 Score=61.67 Aligned_cols=48 Identities=15% Similarity=0.219 Sum_probs=42.5
Q ss_pred EEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC-CcEEEEEeecCCCC
Q 029039 152 TASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE-IYDIAALCSEEERY 199 (200)
Q Consensus 152 ~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g-i~~I~L~t~~~~~p 199 (200)
..||..+.|.|.||.+|||+.|++.+++.+.... ++.+.|++...+.+
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ 137 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNES 137 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCc
Confidence 4789999999999999999999999999998766 78899988776653
No 62
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.80 E-value=0.00086 Score=50.53 Aligned_cols=59 Identities=19% Similarity=0.166 Sum_probs=50.8
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
.+|++||+.....++. ..+.....++|+|++.++|+.|+.++++++.++|++.+.+-..
T Consensus 78 ~~g~~va~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~g 136 (142)
T PF13480_consen 78 DGGEPVAFALGFRHGG-TLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGGG 136 (142)
T ss_pred ECCEEEEEEEEEEECC-EEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECCC
Confidence 5899999997765544 5677888999999999999999999999999999988877554
No 63
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=97.76 E-value=6.9e-05 Score=61.27 Aligned_cols=65 Identities=22% Similarity=0.333 Sum_probs=52.9
Q ss_pred CCCCeEEEEEEEEe-----CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHh-CCCcEEEEEeecCCC
Q 029039 134 PSNGQLVGFGRAVS-----DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTS-REIYDIAALCSEEER 198 (200)
Q Consensus 134 ~~~g~lVGf~~~~~-----d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~-~gi~~I~L~t~~~~~ 198 (200)
|.+|+|||++.+.. +.....+|..|+|+-.||+.|||++||.+......+ .+...|.|.+...|+
T Consensus 48 D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNr 118 (193)
T KOG3235|consen 48 DENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNR 118 (193)
T ss_pred cCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccH
Confidence 36899999998752 223357899999999999999999999997776653 477889999888775
No 64
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=97.72 E-value=0.00012 Score=64.00 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=49.0
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t 193 (200)
++|++|..+.........+.|..++++|+|||||++++|+..+-+.+-+.|.. -.|..
T Consensus 184 ~d~~iVa~A~t~a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~-~~L~~ 241 (268)
T COG3393 184 GDGKIVAKAETAAENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKI-PCLFV 241 (268)
T ss_pred cCCcEEEeeeccccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCe-eEEEE
Confidence 46699999988766667889999999999999999999999999999887743 34444
No 65
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.66 E-value=4.6e-05 Score=51.52 Aligned_cols=30 Identities=30% Similarity=0.536 Sum_probs=27.9
Q ss_pred EeeCcccccCcHHHHHHHHHHHHHHhCCCc
Q 029039 158 IMVIPSLRQMGIGRMIVQRILRMLTSREIY 187 (200)
Q Consensus 158 l~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~ 187 (200)
++|+|+|||+|||++|+++++++++..|+.
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~ 116 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS 116 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce
Confidence 999999999999999999999999987763
No 66
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.63 E-value=0.004 Score=50.85 Aligned_cols=122 Identities=21% Similarity=0.172 Sum_probs=78.9
Q ss_pred CCCCcCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcC----CcEEEEEecCCCCCc
Q 029039 36 KPSMIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHS----FVVVSVFSNLALSDD 111 (200)
Q Consensus 36 ~~~~~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s----~~~v~~~~~~~~~~d 111 (200)
.|=|.++.+.+- .-.|..++.++|.-.... |.. |.+.-..-.-+.+.++-+|... .+.+++...
T Consensus 18 ~~LP~gF~W~~~-dl~d~~~l~ely~lL~~n---YVE--Ddd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~------ 85 (162)
T PF01233_consen 18 YPLPDGFEWSTL-DLNDDEELKELYELLNEN---YVE--DDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVK------ 85 (162)
T ss_dssp ---STTEEEEE---TTSHHHHHHHHHHHHHH---SSB--TTTSSEEE---HHHHHHHHTSTT--GGGEEEEEET------
T ss_pred CCCCCCCEEEec-CCCCHHHHHHHHHHHHhc---Ccc--CCcceEEeeCCHHHHhheeeCcCCccceEEEEEEC------
Confidence 334668999983 566888888888654221 221 1111111234688899888853 456777641
Q ss_pred hhhhhhccccccccccccccccCCCCeEEEEEEEEeC-------CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhC
Q 029039 112 ESSKRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVSD-------VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR 184 (200)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~~~~~~~~g~lVGf~~~~~d-------~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~ 184 (200)
..+++|||+.+... ....++|--++||+++|.+++.--|++++.+++...
T Consensus 86 -----------------------~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~ 142 (162)
T PF01233_consen 86 -----------------------SSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQ 142 (162)
T ss_dssp -----------------------TTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTT
T ss_pred -----------------------CCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhc
Confidence 57999999987642 124568899999999999999999999999999999
Q ss_pred CCcEEEEE
Q 029039 185 EIYDIAAL 192 (200)
Q Consensus 185 gi~~I~L~ 192 (200)
||.+-.-+
T Consensus 143 gI~qAvyT 150 (162)
T PF01233_consen 143 GIWQAVYT 150 (162)
T ss_dssp T--EEEEE
T ss_pred Cceeeeee
Confidence 98764443
No 67
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.44 E-value=0.0015 Score=64.56 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=31.7
Q ss_pred EEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEE
Q 029039 153 ASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIA 190 (200)
Q Consensus 153 a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~ 190 (200)
..|-.|+|||++|++|||++|++.+.++++ .++..+.
T Consensus 532 ~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~Dwlg 568 (758)
T COG1444 532 WRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLG 568 (758)
T ss_pred eeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEe
Confidence 579999999999999999999999999996 3444443
No 68
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=97.41 E-value=0.00012 Score=59.64 Aligned_cols=65 Identities=23% Similarity=0.388 Sum_probs=52.8
Q ss_pred CCeEEEEEEEE-e--------------CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC-CcEEEEEeecCCCC
Q 029039 136 NGQLVGFGRAV-S--------------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE-IYDIAALCSEEERY 199 (200)
Q Consensus 136 ~g~lVGf~~~~-~--------------d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g-i~~I~L~t~~~~~p 199 (200)
.+.+||++... . .+.....|+.++|||+||+||.|+.|+.+-++.+.++. .+++.|.|.+...|
T Consensus 70 ~~tLIghIigs~~~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvP 149 (190)
T KOG4144|consen 70 EGTLIGHIIGSLWDKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVP 149 (190)
T ss_pred cccceehhhcccCcchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccc
Confidence 68899998542 1 13345889999999999999999999999777776554 47899999999988
Q ss_pred C
Q 029039 200 L 200 (200)
Q Consensus 200 F 200 (200)
|
T Consensus 150 F 150 (190)
T KOG4144|consen 150 F 150 (190)
T ss_pred h
Confidence 8
No 69
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=97.36 E-value=0.00099 Score=51.96 Aligned_cols=62 Identities=19% Similarity=0.190 Sum_probs=50.0
Q ss_pred CCeEEEEEEEEeCC----CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHH-hCCCcEEEEEeecCCC
Q 029039 136 NGQLVGFGRAVSDV----GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT-SREIYDIAALCSEEER 198 (200)
Q Consensus 136 ~g~lVGf~~~~~d~----~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~-~~gi~~I~L~t~~~~~ 198 (200)
++++||.+.+.... ...+.| ...++|+|+|||+|+..+..+++++- +.++.+|.+.|.+.|.
T Consensus 76 ~~~~iG~~~~~~~~~~~~~~~~~i-g~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~ 142 (187)
T COG1670 76 DGELIGVIGLSDIDRAANGDLAEI-GYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENE 142 (187)
T ss_pred CCeEEEEEEEEEeccccccceEEE-EEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCH
Confidence 46999999876432 334444 44559999999999999999999996 4799999999999885
No 70
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.35 E-value=0.0031 Score=54.24 Aligned_cols=111 Identities=19% Similarity=0.181 Sum_probs=78.1
Q ss_pred eEEEeCCCCCCHHHHHHHHH--HcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcc
Q 029039 42 IYISTNPSDINPQELSQLFI--SCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMV 119 (200)
Q Consensus 42 i~i~~~~~~~D~~~L~~L~~--~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~ 119 (200)
+++|. -.|+.+|.++.. ...|.+.. + +....+.++.+-.+.-.+.++|.
T Consensus 3 vvvrr---l~dp~el~~~~dV~~~aWg~~d------~-----~~~~~d~i~al~~~GGlvlgAf~--------------- 53 (266)
T COG3375 3 VVVRR---LTDPAELDEAEDVQASAWGSED------R-----DGAPADTIRALRYHGGLVLGAFS--------------- 53 (266)
T ss_pred eeEEe---cCCHHHHHHHHHHHHHHhCccc------c-----ccchHHHHHHHHhcCCeEEEEEc---------------
Confidence 45555 446666666653 23454222 1 12345666655566666777774
Q ss_pred ccccccccccccccCCCCeEEEEEEEEe---CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecC
Q 029039 120 PLLGNLAQRVVPVTPSNGQLVGFGRAVS---DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEE 196 (200)
Q Consensus 120 ~g~~~~~~~~~~~~~~~g~lVGf~~~~~---d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~ 196 (200)
.+|++||.+.... .+....|=+.+.|+|+++++|+|-+|=..=-+++..+|+..|.-+.+|-
T Consensus 54 ---------------~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl 118 (266)
T COG3375 54 ---------------ADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPL 118 (266)
T ss_pred ---------------CCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccc
Confidence 4679999998776 3334566789999999999999999998888999999999888777653
No 71
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=97.22 E-value=0.0027 Score=55.69 Aligned_cols=55 Identities=16% Similarity=0.173 Sum_probs=40.3
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEE
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIA 190 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~ 190 (200)
.+|++|.-+....-......| +|.++|+|||||+++.+..+++..|.++|+.-.+
T Consensus 172 ~~~~iVs~~~s~~~~~~~~EI-~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~W 226 (265)
T PF12746_consen 172 HDGEIVSGCSSYFVYENGIEI-DIETHPEYRGKGLATAVAAAFILECLENGLYPSW 226 (265)
T ss_dssp ETTEEEEEEEEEEEETTEEEE-EEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-
T ss_pred ECCEEEEEEEEEEEECCEEEE-EEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCe
Confidence 478888766433222233455 8999999999999999999999999999986544
No 72
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=97.14 E-value=0.0015 Score=53.34 Aligned_cols=64 Identities=11% Similarity=0.302 Sum_probs=52.5
Q ss_pred CCCeEEEEEEEEeCC---CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 135 SNGQLVGFGRAVSDV---GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~---~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
..++|-|++..-..+ ....++..|.|.|+||+.|+|+.||..+.+.....+..-+.|.+...|+
T Consensus 49 p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~ 115 (173)
T KOG3234|consen 49 PTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQ 115 (173)
T ss_pred CCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccch
Confidence 578999999775433 3457899999999999999999999999999987766777777766654
No 73
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.06 E-value=0.006 Score=50.70 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=68.2
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccc
Q 029039 41 PIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVP 120 (200)
Q Consensus 41 ~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~ 120 (200)
.+.+-.+|.+.-++++.++....+|. | ...+...+++.+...+.+..+...
T Consensus 3 dvdvv~NP~~e~~d~fmk~~g~~r~~---F-----------k~~Di~~wk~sf~~~Y~l~~~~~K--------------- 53 (181)
T PF06852_consen 3 DVDVVINPPQEYFDQFMKLHGNERWN---F-----------KRNDIKLWKESFDDDYWLVLTCLK--------------- 53 (181)
T ss_pred ceEEEeCCCHHHHHHHHHHhcCCccc---c-----------cHHHHHHHHHhhccCeEEEEEEEc---------------
Confidence 45666666666677777777666665 3 234688899999887666555431
Q ss_pred cccccccccccccCCCCeEEEEEEEEe-------CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHH
Q 029039 121 LLGNLAQRVVPVTPSNGQLVGFGRAVS-------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT 182 (200)
Q Consensus 121 g~~~~~~~~~~~~~~~g~lVGf~~~~~-------d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~ 182 (200)
+..++|+.++... ......+++...++|+|||+|+++.+-+.+.++.+
T Consensus 54 --------------gT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~ 108 (181)
T PF06852_consen 54 --------------GTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELD 108 (181)
T ss_pred --------------CCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhc
Confidence 4578888887642 12346789999999999999999755555555554
No 74
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=96.63 E-value=0.0055 Score=48.08 Aligned_cols=61 Identities=16% Similarity=0.330 Sum_probs=45.1
Q ss_pred CCCeEEEEEEEEe----CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCCC
Q 029039 135 SNGQLVGFGRAVS----DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERY 199 (200)
Q Consensus 135 ~~g~lVGf~~~~~----d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~p 199 (200)
-+|.+|||+.++. ......-|.++++.-.|||+|+||+..+++-+..+ |.. .+.+-++|.|
T Consensus 44 ~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g~w--~Va~i~EN~P 108 (143)
T COG5628 44 IGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--GVW--QVATVRENTP 108 (143)
T ss_pred ECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh--ceE--EEEEeccCCh
Confidence 3789999997762 22233457899999999999999999999988765 433 4445555554
No 75
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=96.49 E-value=0.0065 Score=45.02 Aligned_cols=60 Identities=13% Similarity=0.196 Sum_probs=47.8
Q ss_pred CCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCC
Q 029039 134 PSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEER 198 (200)
Q Consensus 134 ~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~ 198 (200)
+.+|++|--+... + +..+..-+.-|+|||||+.+.++....+.+.++|+ -+...++++|.
T Consensus 5 gpeG~PVSW~lmd--q--tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~-P~Y~hv~~~N~ 64 (89)
T PF08444_consen 5 GPEGNPVSWSLMD--Q--TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGF-PFYGHVDEDNE 64 (89)
T ss_pred CCCCCEeEEEEec--c--cccccccccCHhHhcCCHHHHHHHHHHHHHHHCCC-CeEeehHhccH
Confidence 3689998877543 2 34677888999999999999999999999999997 46666666653
No 76
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=96.28 E-value=0.013 Score=52.27 Aligned_cols=60 Identities=17% Similarity=0.242 Sum_probs=53.2
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecCCCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEEERY 199 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~~~p 199 (200)
+++++|+++....+ .|--|+|+|.+||-|+.-+|+.++++.+-++|...+.+.|.+.+..
T Consensus 44 ~~~~iiacGsiaGn-----vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~ 103 (352)
T COG3053 44 DNEEIIACGSIAGN-----VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAA 103 (352)
T ss_pred CCCcEEEecccccc-----eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHH
Confidence 67999999976543 5789999999999999999999999999999999999999887653
No 77
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=95.99 E-value=0.0069 Score=42.95 Aligned_cols=28 Identities=29% Similarity=0.388 Sum_probs=24.9
Q ss_pred EEEEEeeCcccccCcHHHHHHHHHHHHH
Q 029039 154 SIHDIMVIPSLRQMGIGRMIVQRILRML 181 (200)
Q Consensus 154 ~I~dl~V~P~yrgqGIG~~Ll~~l~~~~ 181 (200)
-|..|-|+|.+|++||+++||+.+.+..
T Consensus 7 GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 7 GISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 4788999999999999999999887754
No 78
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=95.67 E-value=0.055 Score=46.55 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=38.3
Q ss_pred cEEEEEEEeeCcccccC--------c--------------------HHHHHHHHHHHHHHhCCCcEEEEEeecC
Q 029039 151 LTASIHDIMVIPSLRQM--------G--------------------IGRMIVQRILRMLTSREIYDIAALCSEE 196 (200)
Q Consensus 151 ~~a~I~dl~V~P~yrgq--------G--------------------IG~~Ll~~l~~~~~~~gi~~I~L~t~~~ 196 (200)
....+..++|+|+||++ | +...|+..+.+.+..+||+.+...+++.
T Consensus 110 ~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~ 183 (241)
T TIGR03694 110 RIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPR 183 (241)
T ss_pred ceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHH
Confidence 35678899999999975 2 4577999999999999999988887753
No 79
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=95.60 E-value=0.12 Score=46.90 Aligned_cols=107 Identities=15% Similarity=0.179 Sum_probs=58.8
Q ss_pred eEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccc
Q 029039 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (200)
Q Consensus 42 i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g 121 (200)
+.||.. ...|+++|.+|=..+|-..... +.+.+.+.+.++.|.-.++-... +.+.|
T Consensus 2 ~viRp~-~~~Dl~aL~~LA~~sg~G~TsL------------P~d~~~L~~rI~~S~~sFa~~~~-~~~~~---------- 57 (342)
T PF04958_consen 2 LVIRPA-RPSDLDALYALARESGPGFTSL------------PPDREALAERIERSERSFAGRDV-DFPGD---------- 57 (342)
T ss_dssp EEEEE---GGGHHHHHHHHHHS-TT-TTS-------------S-HHHHHHHHHHHHHHHH-TT-----S-----------
T ss_pred eEEecC-chhhHHHHHHHHHHcCCCcccC------------CCCHHHHHHHHHHHHHHhhcccc-CCCCc----------
Confidence 467884 7899999999999886542222 34677777777654222110000 00000
Q ss_pred cccccccccccc-CCCCeEEEEEEEE------------------------------------eCCCcEEEEEEEeeCccc
Q 029039 122 LGNLAQRVVPVT-PSNGQLVGFGRAV------------------------------------SDVGLTASIHDIMVIPSL 164 (200)
Q Consensus 122 ~~~~~~~~~~~~-~~~g~lVGf~~~~------------------------------------~d~~~~a~I~dl~V~P~y 164 (200)
..+..++. .+.|++||.+.+. .|......|+.++++|+|
T Consensus 58 ----~~YlfVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~ 133 (342)
T PF04958_consen 58 ----EGYLFVLEDTETGEVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDY 133 (342)
T ss_dssp -----EEEEEEEETTT--EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGG
T ss_pred ----cceEEEEEecCCCcEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHH
Confidence 01111222 1468888877443 133445689999999999
Q ss_pred ccCcHHHHHHHH
Q 029039 165 RQMGIGRMIVQR 176 (200)
Q Consensus 165 rgqGIG~~Ll~~ 176 (200)
|+-|.|+.|-+.
T Consensus 134 R~~~~G~lLSr~ 145 (342)
T PF04958_consen 134 RGGGNGRLLSRS 145 (342)
T ss_dssp TTSHHHHHHHHH
T ss_pred cCCchHHHHHHH
Confidence 999999998764
No 80
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=95.50 E-value=0.048 Score=43.56 Aligned_cols=41 Identities=10% Similarity=0.109 Sum_probs=36.5
Q ss_pred CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEE
Q 029039 150 GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIA 190 (200)
Q Consensus 150 ~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~ 190 (200)
..+.||+.|+|....||+|+|++|.+.+.+.++..|...|.
T Consensus 82 e~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~t 122 (167)
T COG3818 82 ENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLT 122 (167)
T ss_pred CceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEE
Confidence 46789999999999999999999999999999988876443
No 81
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=95.14 E-value=0.068 Score=41.68 Aligned_cols=47 Identities=21% Similarity=0.338 Sum_probs=35.3
Q ss_pred CCCeEEEEEEEE------eCC--CcE----E-EEEEEeeCcccccCcHHHHHHHHHHHHH
Q 029039 135 SNGQLVGFGRAV------SDV--GLT----A-SIHDIMVIPSLRQMGIGRMIVQRILRML 181 (200)
Q Consensus 135 ~~g~lVGf~~~~------~d~--~~~----a-~I~dl~V~P~yrgqGIG~~Ll~~l~~~~ 181 (200)
..+.++|+..+- .|. ... . -|.|++||++.|++|+|++|.+.+++.-
T Consensus 16 ~~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e 75 (120)
T PF05301_consen 16 GKGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEE 75 (120)
T ss_pred CCceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHc
Confidence 458899998552 232 211 1 4679999999999999999999998754
No 82
>PRK10456 arginine succinyltransferase; Provisional
Probab=95.07 E-value=0.24 Score=45.11 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=65.7
Q ss_pred eEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccc
Q 029039 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (200)
Q Consensus 42 i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g 121 (200)
+.||+. ...|+++|.+|=..+|-..... +.+.+.|.+.++.|.-.+..- .++
T Consensus 2 ~vvRpv-~~~Dl~aL~~LA~~sG~G~TsL------------P~d~~~L~~rI~~S~~sF~~~----~~~----------- 53 (344)
T PRK10456 2 MVIRPV-ERSDLAALMQLAGKTGGGLTSL------------PANEATLAARIERALKTWQGE----LPK----------- 53 (344)
T ss_pred eEEecC-ccccHHHHHHHHHHcCCCcccC------------CCCHHHHHHHHHHHHHHhcCc----CCC-----------
Confidence 567884 8899999999999887542223 346778888777653322111 000
Q ss_pred ccccccccccccC-CCCeEEEEEEEEe------------------------------------CCCcEEEEEEEeeCccc
Q 029039 122 LGNLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSL 164 (200)
Q Consensus 122 ~~~~~~~~~~~~~-~~g~lVGf~~~~~------------------------------------d~~~~a~I~dl~V~P~y 164 (200)
. ...+..++.| +.|++||.+.+.. |......|+.++++|+|
T Consensus 54 -~-~~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~ 131 (344)
T PRK10456 54 -S-EQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDW 131 (344)
T ss_pred -C-CccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHH
Confidence 0 0011122222 4688888874421 22334679999999999
Q ss_pred ccCcHHHHHHHH
Q 029039 165 RQMGIGRMIVQR 176 (200)
Q Consensus 165 rgqGIG~~Ll~~ 176 (200)
|+-|.|+.|-+.
T Consensus 132 R~~~~G~LLSr~ 143 (344)
T PRK10456 132 RKEGNGYLLSKS 143 (344)
T ss_pred cCCCchhHHHHH
Confidence 999999988653
No 83
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=94.36 E-value=0.31 Score=41.04 Aligned_cols=61 Identities=13% Similarity=0.141 Sum_probs=47.9
Q ss_pred CCCeEEEEEEEEeC---------------------CCcEEEEEEEeeCcccccC---c----HHHHHHHHHHHHHHhCCC
Q 029039 135 SNGQLVGFGRAVSD---------------------VGLTASIHDIMVIPSLRQM---G----IGRMIVQRILRMLTSREI 186 (200)
Q Consensus 135 ~~g~lVGf~~~~~d---------------------~~~~a~I~dl~V~P~yrgq---G----IG~~Ll~~l~~~~~~~gi 186 (200)
++|++||..|+++. ......+..++|+|++++. + +...|+..+.+++..+|+
T Consensus 61 ~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi 140 (207)
T PRK13834 61 DSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGY 140 (207)
T ss_pred CCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCC
Confidence 57899999988631 1346789999999986422 2 667899999999999999
Q ss_pred cEEEEEeec
Q 029039 187 YDIAALCSE 195 (200)
Q Consensus 187 ~~I~L~t~~ 195 (200)
+.+...+++
T Consensus 141 ~~~~~v~~~ 149 (207)
T PRK13834 141 TEIVTATDL 149 (207)
T ss_pred CEEEEEECH
Confidence 998887765
No 84
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=94.25 E-value=1.2 Score=38.65 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=43.0
Q ss_pred CCCeEEEEEEEE--eCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEE
Q 029039 135 SNGQLVGFGRAV--SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAA 191 (200)
Q Consensus 135 ~~g~lVGf~~~~--~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L 191 (200)
.+|+|||.+.+. .|+.. -| ..+-||+|-.+++|+-.+-.-++.+++.|+..+.|
T Consensus 151 ~~g~LiaVav~D~l~d~lS--AV-Y~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YL 206 (240)
T PRK01305 151 GDGKLVAVAVTDVLDDGLS--AV-YTFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYL 206 (240)
T ss_pred eCCeEEEEEEEeccCCcee--eE-EEeeCCCccccCCHHHHHHHHHHHHHHcCCCeEee
Confidence 589999999664 23321 12 45689999999999999999999999999887766
No 85
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=94.24 E-value=0.59 Score=42.87 Aligned_cols=115 Identities=20% Similarity=0.182 Sum_probs=76.7
Q ss_pred CcCeEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhc----CCcEEEEEecCCCCCchhh
Q 029039 39 MIPIYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSH----SFVVVSVFSNLALSDDESS 114 (200)
Q Consensus 39 ~~~i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~----s~~~v~~~~~~~~~~d~~~ 114 (200)
+.++.+.+- .-.|..+|.+|+.-..-+ |-. +++.-.--.-++|.++-+|+. ..+.+++...
T Consensus 78 p~gf~W~tl-dv~~~~~l~el~~lL~en---yVE--d~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~--------- 142 (421)
T KOG2779|consen 78 PTGFRWETL-DVSDFKDLEELYNLLNEN---YVE--DDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVK--------- 142 (421)
T ss_pred CCCceeecc-CCccHhHHHHHHhhcccC---CCC--ccccchhhhccHHHHHhhhcCCCCccceEEEEEEe---------
Confidence 456788774 466778888888443211 211 100000012357888888874 2455666531
Q ss_pred hhhccccccccccccccccCCCCeEEEEEEEEe------C-CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCc
Q 029039 115 KRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVS------D-VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIY 187 (200)
Q Consensus 115 ~~~~~~g~~~~~~~~~~~~~~~g~lVGf~~~~~------d-~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~ 187 (200)
..+++|||+.+.. | ....+.|--++||.+.|++++.=-|++++-+++.-.||.
T Consensus 143 --------------------~s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIf 202 (421)
T KOG2779|consen 143 --------------------SSKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIF 202 (421)
T ss_pred --------------------cCCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhh
Confidence 5689999997653 2 224578899999999999999999999999999876765
Q ss_pred E
Q 029039 188 D 188 (200)
Q Consensus 188 ~ 188 (200)
+
T Consensus 203 q 203 (421)
T KOG2779|consen 203 Q 203 (421)
T ss_pred h
Confidence 4
No 86
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.07 E-value=0.14 Score=38.60 Aligned_cols=45 Identities=11% Similarity=0.038 Sum_probs=36.5
Q ss_pred CCeEEEEEEEEeCC--CcEEEEEEEeeCcccccCcHHHHHHHHHHHH
Q 029039 136 NGQLVGFGRAVSDV--GLTASIHDIMVIPSLRQMGIGRMIVQRILRM 180 (200)
Q Consensus 136 ~g~lVGf~~~~~d~--~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~ 180 (200)
++...|.+.+.... ...+||.-++|.|+.||+|+|+.|.+++.+.
T Consensus 16 ~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d 62 (99)
T cd04264 16 SEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD 62 (99)
T ss_pred eCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhh
Confidence 44566777665433 4678999999999999999999999999876
No 87
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=93.77 E-value=0.54 Score=42.70 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=62.9
Q ss_pred EEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccccc
Q 029039 44 ISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLG 123 (200)
Q Consensus 44 i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~ 123 (200)
||. ....|+++|.+|=..+|-..... +.+.+.+.+.++.|.-.+..-. ++ .
T Consensus 2 vRP-v~~~Dl~aL~~LA~~sg~G~TsL------------P~d~~~L~~rI~~S~~sF~~~~----~~------------~ 52 (336)
T TIGR03244 2 VRP-VETSDLDALYQLAQSTGIGLTSL------------PANEDLLSARIERAEKTFSGEL----TR------------A 52 (336)
T ss_pred ccc-CccccHHHHHHHHHHcCCCcccC------------CCCHHHHHHHHHHHHHHhcCcC----CC------------C
Confidence 455 36789999999998886542223 3467788887776533221100 00 0
Q ss_pred ccccccccccC-CCCeEEEEEEEEe------------------------------------CCCcEEEEEEEeeCccccc
Q 029039 124 NLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSLRQ 166 (200)
Q Consensus 124 ~~~~~~~~~~~-~~g~lVGf~~~~~------------------------------------d~~~~a~I~dl~V~P~yrg 166 (200)
...+..++.| +.|++||.+.+.. |......|+.++++|+||+
T Consensus 53 -~~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~ 131 (336)
T TIGR03244 53 -EQGYLFVLEDTETGTVAGVSAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRK 131 (336)
T ss_pred -CccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcC
Confidence 0011122222 4688888874431 2234467999999999999
Q ss_pred CcHHHHHHHH
Q 029039 167 MGIGRMIVQR 176 (200)
Q Consensus 167 qGIG~~Ll~~ 176 (200)
-|.|+.|-+.
T Consensus 132 ~~~G~LLSr~ 141 (336)
T TIGR03244 132 GGNGRLLSKS 141 (336)
T ss_pred CcchhhHHHH
Confidence 9999988653
No 88
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=93.73 E-value=0.54 Score=42.69 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=62.5
Q ss_pred EEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccccc
Q 029039 44 ISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLG 123 (200)
Q Consensus 44 i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~ 123 (200)
||+ ....|+++|.+|=..+|-..... +.+.+.+.+.++.|.-.+.-.. ..+ .
T Consensus 2 iRp-v~~~Dl~aL~~LA~~sG~G~TsL------------P~d~~~L~~rI~~S~~sF~~~~-------------~~~--~ 53 (336)
T TIGR03245 2 VRP-SRFADLPAIERLANESAIGVTSL------------PADRAKLGEKIAQSERSFAAEV-------------SFV--G 53 (336)
T ss_pred ccc-CccccHHHHHHHHHHcCCCcccC------------CCCHHHHHHHHHHHHHHHHhhc-------------CCC--C
Confidence 455 36789999999998887542223 3467778777776533221000 000 0
Q ss_pred ccccccccccC-CCCeEEEEEEEE------------------------------------eCCCcEEEEEEEeeCccccc
Q 029039 124 NLAQRVVPVTP-SNGQLVGFGRAV------------------------------------SDVGLTASIHDIMVIPSLRQ 166 (200)
Q Consensus 124 ~~~~~~~~~~~-~~g~lVGf~~~~------------------------------------~d~~~~a~I~dl~V~P~yrg 166 (200)
+ ..+..++.| +.|++||.+.+. .|......|+.++++|+||+
T Consensus 54 ~-~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~ 132 (336)
T TIGR03245 54 E-ERYLFVLEDTETGKLLGTSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRK 132 (336)
T ss_pred C-ccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcC
Confidence 0 011112222 468888877442 12234467999999999999
Q ss_pred CcHHHHHHHH
Q 029039 167 MGIGRMIVQR 176 (200)
Q Consensus 167 qGIG~~Ll~~ 176 (200)
-|.|+.|-+.
T Consensus 133 ~~~G~lLSr~ 142 (336)
T TIGR03245 133 TEAAELLSRA 142 (336)
T ss_pred CCchhHHHHH
Confidence 9999988653
No 89
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=93.64 E-value=0.19 Score=42.05 Aligned_cols=50 Identities=14% Similarity=0.275 Sum_probs=37.9
Q ss_pred CCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC
Q 029039 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (200)
Q Consensus 136 ~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g 185 (200)
+-.+|||..-.........+.-|.|-|-||++|+|+-||+.--+..+..+
T Consensus 64 g~h~vGyFSKEk~s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 64 GFHIVGYFSKEKESWDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEEEESS-TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred cceeEEEEEEEecccCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 34789998765333334568889999999999999999999999887655
No 90
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=93.52 E-value=0.63 Score=42.24 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=62.4
Q ss_pred EEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccccc
Q 029039 44 ISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLG 123 (200)
Q Consensus 44 i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~ 123 (200)
||. ....|+++|.+|=..+|-.....| .+.+.+.+.++.|.-.+.-... + .
T Consensus 2 vRp-v~~~Dl~aL~~LA~~sg~G~TsLP------------~d~~~L~~rI~~S~~sF~~~~~--------------~--~ 52 (335)
T TIGR03243 2 VRP-VRTSDLDALMQLARESGIGLTSLP------------ADRAALGSRIARSEKSFAGEST--------------R--G 52 (335)
T ss_pred ccc-CccccHHHHHHHHHHcCCCcccCC------------CCHHHHHHHHHHHHHHHhcccC--------------C--C
Confidence 455 367899999999888865422233 4677777777765332211000 0 0
Q ss_pred ccccccccccC-CCCeEEEEEEEEe------------------------------------CCCcEEEEEEEeeCccccc
Q 029039 124 NLAQRVVPVTP-SNGQLVGFGRAVS------------------------------------DVGLTASIHDIMVIPSLRQ 166 (200)
Q Consensus 124 ~~~~~~~~~~~-~~g~lVGf~~~~~------------------------------------d~~~~a~I~dl~V~P~yrg 166 (200)
+ ..+..++.| +.|++||.+.+.. |......|+.++++|+||+
T Consensus 53 ~-~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~ 131 (335)
T TIGR03243 53 E-EGYLFVLEDTETGTVAGVSAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRK 131 (335)
T ss_pred C-ccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcC
Confidence 0 011112222 4688888874431 2234467999999999999
Q ss_pred CcHHHHHHHH
Q 029039 167 MGIGRMIVQR 176 (200)
Q Consensus 167 qGIG~~Ll~~ 176 (200)
-|.|+.|-+.
T Consensus 132 ~~~G~LLSr~ 141 (335)
T TIGR03243 132 GGNGRLLSRS 141 (335)
T ss_pred CCchhhHHHH
Confidence 9999988653
No 91
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=93.02 E-value=0.41 Score=35.99 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=28.6
Q ss_pred cEEEEEEEeeCcccccCcHHHHHHHHHHHHH
Q 029039 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRML 181 (200)
Q Consensus 151 ~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~ 181 (200)
...||.-++|.|+.||+|+|+.|.+++.+..
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~ 63 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDF 63 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence 5789999999999999999999999998764
No 92
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=92.97 E-value=0.25 Score=40.33 Aligned_cols=51 Identities=16% Similarity=0.174 Sum_probs=41.3
Q ss_pred CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHH-hCCCcEEEEEeecCCCCC
Q 029039 150 GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT-SREIYDIAALCSEEERYL 200 (200)
Q Consensus 150 ~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~-~~gi~~I~L~t~~~~~pF 200 (200)
.....+.-+.-.|.-||+|||+..+..++.++. ..++.+..+....+|.|+
T Consensus 105 ~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~s 156 (185)
T KOG4135|consen 105 VITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPS 156 (185)
T ss_pred eeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchH
Confidence 445667777789999999999999999999996 457777777777777664
No 93
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=92.50 E-value=0.2 Score=45.80 Aligned_cols=42 Identities=24% Similarity=0.253 Sum_probs=37.1
Q ss_pred cEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEE
Q 029039 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAAL 192 (200)
Q Consensus 151 ~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~ 192 (200)
.++.|..|++.|.|||+|.-++|+.+.++...++|+.-..|+
T Consensus 69 ~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~ 110 (389)
T COG4552 69 PTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALH 110 (389)
T ss_pred eccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEec
Confidence 356799999999999999999999999999999998765554
No 94
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=92.45 E-value=0.51 Score=37.05 Aligned_cols=54 Identities=11% Similarity=0.112 Sum_probs=42.1
Q ss_pred CCCeEEEEEEEE--eCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEE
Q 029039 135 SNGQLVGFGRAV--SDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAA 191 (200)
Q Consensus 135 ~~g~lVGf~~~~--~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L 191 (200)
.+|+|||.+.+. .++.. -| ..+-||++..+.+|+-.+-.-++.+++.|++.+.|
T Consensus 46 ~~~kLiav~v~D~l~~glS--aV-Y~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YL 101 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPDGLS--AV-YTFYDPDYSKRSLGTYSILREIELARELGLPYYYL 101 (128)
T ss_pred eCCeEEEEEEeecccchhh--he-eeeeCCCccccCcHHHHHHHHHHHHHHcCCCEEee
Confidence 589999998654 33321 12 33469999999999999999999999999887765
No 95
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=92.45 E-value=0.78 Score=37.90 Aligned_cols=61 Identities=16% Similarity=0.242 Sum_probs=47.3
Q ss_pred CCCeEEEEEEEEeC---------------------CCcEEEEEEEeeCccccc------CcHHHHHHHHHHHHHHhCCCc
Q 029039 135 SNGQLVGFGRAVSD---------------------VGLTASIHDIMVIPSLRQ------MGIGRMIVQRILRMLTSREIY 187 (200)
Q Consensus 135 ~~g~lVGf~~~~~d---------------------~~~~a~I~dl~V~P~yrg------qGIG~~Ll~~l~~~~~~~gi~ 187 (200)
++|+++|.+|+.+. ......+..++|+|+.++ .-+...|+..+.+.+.++|++
T Consensus 52 ~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~ 131 (182)
T PF00765_consen 52 DDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIR 131 (182)
T ss_dssp ETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-S
T ss_pred ECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCC
Confidence 35999999999831 245678999999998542 247889999999999999999
Q ss_pred EEEEEeec
Q 029039 188 DIAALCSE 195 (200)
Q Consensus 188 ~I~L~t~~ 195 (200)
.+...++.
T Consensus 132 ~~v~V~~~ 139 (182)
T PF00765_consen 132 HIVGVVDP 139 (182)
T ss_dssp EEEEEEEH
T ss_pred EEEEEECh
Confidence 98887764
No 96
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=91.23 E-value=0.16 Score=47.89 Aligned_cols=35 Identities=31% Similarity=0.487 Sum_probs=31.8
Q ss_pred EEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCc
Q 029039 153 ASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIY 187 (200)
Q Consensus 153 a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~ 187 (200)
+.|..+.|||+||+-|+|..-|..+.+|..++-+.
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~eRriP 276 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIERRIP 276 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHHhhCh
Confidence 57999999999999999999999999999877554
No 97
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=91.01 E-value=0.49 Score=42.06 Aligned_cols=51 Identities=12% Similarity=0.277 Sum_probs=38.7
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g 185 (200)
.+..+|||..=.........+.-|.|-|-||++|+|+-||+.-.+..+..|
T Consensus 138 ~g~h~vGYFSKEK~s~~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 138 HGSHIVGYFSKEKVSAEDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred CCcEEEEEeceeccccCCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 356899998543221122357889999999999999999999999887655
No 98
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.95 E-value=1.4 Score=42.21 Aligned_cols=116 Identities=12% Similarity=0.111 Sum_probs=84.7
Q ss_pred eEEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccc
Q 029039 42 IYISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPL 121 (200)
Q Consensus 42 i~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g 121 (200)
++++.. ...+++.+.+|-+.+++ |.-. ..+...++++.|...+.+.+....
T Consensus 414 l~vs~~-de~~i~RIsQLtqkTNQ----FnlT-------tkRy~e~dV~~~~~~~~~li~sv~----------------- 464 (574)
T COG3882 414 LTVSKF-DEVNIPRISQLTQKTNQ----FNLT-------TKRYNEEDVRQMQEDPNFLIFSVS----------------- 464 (574)
T ss_pred EEEeec-cccCcHHHHHHhhcccc----eeec-------hhhhcHHHHHHHhhCCCeEEEEEE-----------------
Confidence 778886 78999999999998865 4321 134567888888877766544321
Q ss_pred ccccccccccccCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeec
Q 029039 122 LGNLAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (200)
Q Consensus 122 ~~~~~~~~~~~~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~ 195 (200)
+.|.+ .|+.+||.+.+.-.. ....|..+...-.--||+|=.+||..+.+.+...|+..|...-.+
T Consensus 465 l~DKf--------gDnGiigvviv~kk~-~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~p 529 (574)
T COG3882 465 LKDKF--------GDNGIIGVVIVEKKE-SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIP 529 (574)
T ss_pred ecccc--------ccCceEEEEEEEecC-CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecc
Confidence 12221 467899999887543 455677777777777999999999999999999999888776444
No 99
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=89.30 E-value=2.4 Score=34.76 Aligned_cols=93 Identities=16% Similarity=0.206 Sum_probs=61.0
Q ss_pred CeEEEeCCCCC-CHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcc
Q 029039 41 PIYISTNPSDI-NPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMV 119 (200)
Q Consensus 41 ~i~i~~~~~~~-D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~ 119 (200)
+|...+..... |.+.|.+|.++. |. ...+.+..-+.|++..+.+.+-
T Consensus 21 ~i~~~~s~~~~~d~~kL~~ll~~s------f~----------~~~~v~~yl~~l~~~~~~iy~d---------------- 68 (170)
T PF04768_consen 21 KILKHSSLSEFVDLDKLRALLERS------FG----------GKLDVDHYLDRLNNRLFKIYVD---------------- 68 (170)
T ss_dssp -EEEESSCCCSS-HHHHHHHHHHH------ST----------SSSBHTTHHHHHHTS-SEEEEE----------------
T ss_pred eeEEecCccccCCHHHHHHHHHhc------cc----------ccccHHHHHHHhhccceEEEEe----------------
Confidence 45555555666 999999999988 21 1235566666777775555442
Q ss_pred ccccccccccccccCCCCeEEEEEEEEe----CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHH
Q 029039 120 PLLGNLAQRVVPVTPSNGQLVGFGRAVS----DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT 182 (200)
Q Consensus 120 ~g~~~~~~~~~~~~~~~g~lVGf~~~~~----d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~ 182 (200)
+..-|.+.+.. .....+||.-++|.|+.||.||+..+-+++.+...
T Consensus 69 -----------------~~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~p 118 (170)
T PF04768_consen 69 -----------------EDYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDFP 118 (170)
T ss_dssp -----------------TTSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH-S
T ss_pred -----------------CCceEEEEEEecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhcc
Confidence 22235554532 23358999999999999999999999999977554
No 100
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=89.07 E-value=0.35 Score=48.01 Aligned_cols=30 Identities=33% Similarity=0.447 Sum_probs=27.9
Q ss_pred EEEEEEeeCcccccCcHHHHHHHHHHHHHH
Q 029039 153 ASIHDIMVIPSLRQMGIGRMIVQRILRMLT 182 (200)
Q Consensus 153 a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~ 182 (200)
+.|-.|+|||+|+++|+|++-++-+.+...
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~e 644 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFE 644 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHh
Confidence 679999999999999999999999988875
No 101
>PTZ00064 histone acetyltransferase; Provisional
Probab=88.63 E-value=0.66 Score=44.24 Aligned_cols=50 Identities=16% Similarity=0.299 Sum_probs=37.6
Q ss_pred CCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC
Q 029039 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (200)
Q Consensus 136 ~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g 185 (200)
+-.+|||..=.........+.-|.|-|-||++|+|+-||+.-.+..+..|
T Consensus 368 G~HiVGYFSKEK~S~~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 368 GCHIVGYFSKEKVSLLHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred CcEEEEEecccccCcccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 45899998543211112357888999999999999999999998887555
No 102
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=88.25 E-value=7.8 Score=34.18 Aligned_cols=58 Identities=7% Similarity=-0.079 Sum_probs=44.9
Q ss_pred CCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 029039 135 SNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t 193 (200)
.+|++||.+.+...+.. .+......++++++.+-+..|+-+++++++++|++...+-.
T Consensus 203 ~~g~~va~~l~~~~~~~-~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~ 260 (330)
T TIGR03019 203 GDGVVASAVLSFYFRDE-VLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGR 260 (330)
T ss_pred CCCCEEEEEEEEEeCCE-EEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCC
Confidence 47888888766654432 23334577899999999999999999999999998877644
No 103
>PLN03239 histone acetyltransferase; Provisional
Probab=87.58 E-value=0.9 Score=41.47 Aligned_cols=50 Identities=16% Similarity=0.257 Sum_probs=37.6
Q ss_pred CCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC
Q 029039 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (200)
Q Consensus 136 ~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g 185 (200)
+-.+|||..=.........+.-|.|-|-||++|+|+-||+.-.+..+..|
T Consensus 197 g~h~vGYFSKEK~s~~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 197 GFHPVGYYSKEKYSDVGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEEeeecccCCCCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 45789998543221112357889999999999999999999998887555
No 104
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=85.82 E-value=0.73 Score=42.66 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=37.9
Q ss_pred cccccccccCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhC
Q 029039 125 LAQRVVPVTPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSR 184 (200)
Q Consensus 125 ~~~~~~~~~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~ 184 (200)
++-|++.-..++...||+..=.-.......+.-|.|-|-||++|.|+-||+.-.+.-+..
T Consensus 233 pFlFYVlte~d~~G~VGYFSKEK~s~~~yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E 292 (396)
T KOG2747|consen 233 PFLFYVLTECDSYGCVGYFSKEKESSENYNLACILTLPPYQRKGYGKLLIDFSYELSRRE 292 (396)
T ss_pred ceEEEEEEecCCcceeeeeccccccccccceeeeeecChhhhcccchhhhhhhhhhhccc
Confidence 444554332233336787743221112234778899999999999999999887776533
No 105
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=84.10 E-value=0.95 Score=42.63 Aligned_cols=50 Identities=12% Similarity=0.272 Sum_probs=37.4
Q ss_pred CCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCC
Q 029039 136 NGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSRE 185 (200)
Q Consensus 136 ~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~g 185 (200)
+..+|||..=.........|.-|.|.|-||++|+|+-||+.-.+..+..|
T Consensus 290 g~h~vGyFSKEk~s~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 290 GCHMVGYFSKEKHSEEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred CcEEEEEecccccCcCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 45899998543211112357888999999999999999999888877554
No 106
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=82.31 E-value=5.4 Score=35.82 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=59.4
Q ss_pred EEEeCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccccc
Q 029039 43 YISTNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLL 122 (200)
Q Consensus 43 ~i~~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~ 122 (200)
.+|+. ...|+++|.+|=..++-. |+. -+.+.+.++..+..+...+..-.. + ...
T Consensus 3 vvRP~-~~aDl~al~~LA~~sg~G---~Ts---------LP~de~~L~~Ri~~se~sf~~~~~---~----------ge~ 56 (336)
T COG3138 3 VVRPV-ERADLEALMELAVKTGVG---LTS---------LPADEATLRARIERSEKSFQGELP---P----------GEA 56 (336)
T ss_pred ccccc-cccCHHHHHHHHHhcCCC---ccc---------CCCCHHHHHHHHHHHHHHHhcccC---C----------CCc
Confidence 45663 678999999999888654 322 134667777776654322211000 0 000
Q ss_pred cccccccccccC-CCCeEEEEEEEE------------------------------------eCCCcEEEEEEEeeCcccc
Q 029039 123 GNLAQRVVPVTP-SNGQLVGFGRAV------------------------------------SDVGLTASIHDIMVIPSLR 165 (200)
Q Consensus 123 ~~~~~~~~~~~~-~~g~lVGf~~~~------------------------------------~d~~~~a~I~dl~V~P~yr 165 (200)
.+.+++.| +.|++||.+-+. .|.+....|+.++++|+||
T Consensus 57 ----~Y~fVLEDsetG~VvG~saI~a~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~R 132 (336)
T COG3138 57 ----GYLFVLEDSETGTVVGISAIEAAVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWR 132 (336)
T ss_pred ----cEEEEEEecCCceEEeEEEEEEeeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHh
Confidence 11122221 467777765321 1233456789999999999
Q ss_pred cCcHHHHHHH
Q 029039 166 QMGIGRMIVQ 175 (200)
Q Consensus 166 gqGIG~~Ll~ 175 (200)
+-|-|+.|-+
T Consensus 133 kg~nG~Llsr 142 (336)
T COG3138 133 KGGNGRLLSK 142 (336)
T ss_pred cccchhhhhh
Confidence 8888876643
No 107
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=82.00 E-value=2.1 Score=31.54 Aligned_cols=24 Identities=21% Similarity=0.247 Sum_probs=20.1
Q ss_pred cEEEEEEEeeCcccccCcHHHHHH
Q 029039 151 LTASIHDIMVIPSLRQMGIGRMIV 174 (200)
Q Consensus 151 ~~a~I~dl~V~P~yrgqGIG~~Ll 174 (200)
..+.|..++|+|+||++.+-..|.
T Consensus 77 ~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 77 RVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred cEEEeehheECHhHCCChHHHHHh
Confidence 456789999999999998877764
No 108
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=81.92 E-value=2.6 Score=38.83 Aligned_cols=41 Identities=20% Similarity=0.500 Sum_probs=31.7
Q ss_pred cEEEEEEEeeCcccccCcHHHHHHHHHHHHH-HhCCCcEEEE
Q 029039 151 LTASIHDIMVIPSLRQMGIGRMIVQRILRML-TSREIYDIAA 191 (200)
Q Consensus 151 ~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~-~~~gi~~I~L 191 (200)
....|..+.+.|-||++|+|..|++.+..-. ....+-.+++
T Consensus 216 ~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~v~DiTV 257 (403)
T KOG2696|consen 216 IRPRISQMLILPPFQGKGLGSQLYEAIARDYLEEPTVLDITV 257 (403)
T ss_pred hhhhhheeEEeccccCCchHHHHHHHHHHhhccCCceeEEEe
Confidence 4467888999999999999999999999555 4445444444
No 109
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=81.51 E-value=7.7 Score=36.18 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=62.8
Q ss_pred eCCCCCCHHHHHHHHHHcccCCCCCCCcccccccccccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhcccccccc
Q 029039 46 TNPSDINPQELSQLFISCNHSCNRFPILDSRDRTVEEAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNL 125 (200)
Q Consensus 46 ~~~~~~D~~~L~~L~~~~g~~~~~f~~~~~~~~~~~~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~~~ 125 (200)
+.....|++.+..|-.++ |- .+.++......++++..-+.+
T Consensus 340 ttw~~Ldl~r~q~LI~~S------Fk----------RTLd~h~y~~r~~~~La~~iV----------------------- 380 (495)
T COG5630 340 TTWKDLDLPRLQHLIQSS------FK----------RTLDPHYYETRINTPLARAIV----------------------- 380 (495)
T ss_pred CChhhcCcHHHHHHHHHH------Hh----------hccCHHHHHHhccCcceeEEe-----------------------
Confidence 345678999999998877 31 246788888888888544443
Q ss_pred ccccccccCCCCeEEEEEEEEeC---CCcEEEEEEEeeCccccc-CcHHHHHHHHHHHHHH
Q 029039 126 AQRVVPVTPSNGQLVGFGRAVSD---VGLTASIHDIMVIPSLRQ-MGIGRMIVQRILRMLT 182 (200)
Q Consensus 126 ~~~~~~~~~~~g~lVGf~~~~~d---~~~~a~I~dl~V~P~yrg-qGIG~~Ll~~l~~~~~ 182 (200)
.|..-|.+.+... ...+.|++-++|.++.|| -|||..+-.-+-++..
T Consensus 381 ----------sgdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP 431 (495)
T COG5630 381 ----------SGDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEFP 431 (495)
T ss_pred ----------eccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHHHHHHHHHhCc
Confidence 3444466655433 235679999999999999 9999998877666543
No 110
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=81.10 E-value=1.8 Score=41.11 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=31.7
Q ss_pred CcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeecC
Q 029039 161 IPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSEE 196 (200)
Q Consensus 161 ~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~~ 196 (200)
...+|.||.|+.||+++++.+++.+..+|.+.+...
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG 494 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIG 494 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEeccc
Confidence 467999999999999999999998888998877544
No 111
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.03 E-value=12 Score=31.98 Aligned_cols=61 Identities=18% Similarity=0.204 Sum_probs=46.7
Q ss_pred CCCeEEEEEEEEeC---------------------CCcEEEEEEEeeCc--ccccCc----HHHHHHHHHHHHHHhCCCc
Q 029039 135 SNGQLVGFGRAVSD---------------------VGLTASIHDIMVIP--SLRQMG----IGRMIVQRILRMLTSREIY 187 (200)
Q Consensus 135 ~~g~lVGf~~~~~d---------------------~~~~a~I~dl~V~P--~yrgqG----IG~~Ll~~l~~~~~~~gi~ 187 (200)
.+|+|+|++|++.. .........++|++ .-+++| ++..|+.-+++++..+|++
T Consensus 60 ~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~ 139 (209)
T COG3916 60 SDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGIT 139 (209)
T ss_pred CCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCc
Confidence 68999999998731 12456778888887 333322 4889999999999999999
Q ss_pred EEEEEeec
Q 029039 188 DIAALCSE 195 (200)
Q Consensus 188 ~I~L~t~~ 195 (200)
+|.-.|+.
T Consensus 140 ~IvtVt~~ 147 (209)
T COG3916 140 GIVTVTDT 147 (209)
T ss_pred eEEEEEch
Confidence 99887764
No 112
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=80.02 E-value=31 Score=28.05 Aligned_cols=60 Identities=17% Similarity=0.277 Sum_probs=38.7
Q ss_pred CCCeEEEEEEE--EeCCC-cEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeec
Q 029039 135 SNGQLVGFGRA--VSDVG-LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (200)
Q Consensus 135 ~~g~lVGf~~~--~~d~~-~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~ 195 (200)
+++++.||+.+ ++.|. .+..+..|.++|. +....-.-|+..+.+-+=+.+++.+.+..++
T Consensus 63 e~~~~~GfvLAQaVWQGdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p 125 (161)
T PF09390_consen 63 EGGELQGFVLAQAVWQGDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDAGVYEVHLHLDP 125 (161)
T ss_dssp ETTEEEEEEEEEEEE-SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHTT-SEEEE---T
T ss_pred cCCceeeeeehhHHhcCCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhccceEEEEeeCCH
Confidence 57899999854 44544 4566777777765 4457777888888888877899999887765
No 113
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=77.00 E-value=0.81 Score=41.84 Aligned_cols=45 Identities=16% Similarity=0.332 Sum_probs=30.8
Q ss_pred CeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHH
Q 029039 137 GQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRML 181 (200)
Q Consensus 137 g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~ 181 (200)
-.+|||..=.-.......+.-|.+.|-||++|+|+-||+.-...-
T Consensus 247 ~h~vGyFSKEK~S~~~yNLaCILtLP~yQRrGYG~lLIdFSY~Ls 291 (395)
T COG5027 247 CHLVGYFSKEKESEQDYNLACILTLPPYQRRGYGKLLIDFSYLLS 291 (395)
T ss_pred eeeeeeechhhcccccCceEEEEecChhHhcccceEeeeeeeecc
Confidence 369999853311111234677889999999999999987654433
No 114
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.66 E-value=2.2 Score=37.10 Aligned_cols=44 Identities=23% Similarity=0.224 Sum_probs=34.1
Q ss_pred CeEEEEEEEE------eCCC------cEEEEEEEeeCcccccCcHHHHHHHHHHHH
Q 029039 137 GQLVGFGRAV------SDVG------LTASIHDIMVIPSLRQMGIGRMIVQRILRM 180 (200)
Q Consensus 137 g~lVGf~~~~------~d~~------~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~ 180 (200)
+.|.||+.+- .|.. ...-|.|++||+.-|++|.|++|.+.+++.
T Consensus 81 s~l~GllKVG~KkLfl~D~~~~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~k 136 (264)
T KOG4601|consen 81 SILKGLLKVGYKKLFLTDNEQNQYEEEALCILDFYVHESEQRSGNGFKLFDYMLKK 136 (264)
T ss_pred hheeeeehccceeEEEeccHhhhhccCCceEEEEEeehhhhhcCchHHHHHHHHHh
Confidence 6789998652 3422 123478999999999999999999988874
No 115
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=74.54 E-value=14 Score=35.72 Aligned_cols=76 Identities=11% Similarity=0.060 Sum_probs=55.8
Q ss_pred cccccccccccc---ccccCCCCeEEEEEEEEeCCC-cEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEe
Q 029039 118 MVPLLGNLAQRV---VPVTPSNGQLVGFGRAVSDVG-LTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALC 193 (200)
Q Consensus 118 ~~~g~~~~~~~~---~~~~~~~g~lVGf~~~~~d~~-~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t 193 (200)
+++|.+|+.-.+ +.+.+.+|++|||+.+...+. ....|+-+=-+|+. =+|+=.-|..+++.++|+.|+..+.|--
T Consensus 380 FsLG~fdp~yl~~~~va~~~~~g~VvaFa~l~~~~~~~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aKe~G~~~fsLgm 458 (538)
T COG2898 380 FSLGFFDPRYLDIFPVAAVDNEGEVVAFANLMPTGGKEGYSLDLMRRSPDA-PNGTMDFLFSELILWAKEEGYQRFSLGM 458 (538)
T ss_pred eeccCCCccccccceeeEEcCCCCeEEEEeecccCCcceeEEEeeecCCCC-CchHHHHHHHHHHHHHHHcCCeEEecCC
Confidence 566666644332 233357788999999987544 44566666666665 5799999999999999999999998854
Q ss_pred e
Q 029039 194 S 194 (200)
Q Consensus 194 ~ 194 (200)
.
T Consensus 459 A 459 (538)
T COG2898 459 A 459 (538)
T ss_pred c
Confidence 3
No 116
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=74.00 E-value=10 Score=31.67 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=29.3
Q ss_pred CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCc
Q 029039 150 GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIY 187 (200)
Q Consensus 150 ~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~ 187 (200)
...+.+.-..|+|+.+|.||+..| ..+.-.+++.|+.
T Consensus 83 lLVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVP 119 (196)
T PF02474_consen 83 LLVAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVP 119 (196)
T ss_pred eeEEEEEEEEeeccccccccchhh-hhhhhHHHhcCCC
Confidence 457889999999999999999865 5666666666654
No 117
>PRK00756 acyltransferase NodA; Provisional
Probab=65.98 E-value=21 Score=29.77 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=28.2
Q ss_pred CCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCC
Q 029039 149 VGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREI 186 (200)
Q Consensus 149 ~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi 186 (200)
+...+.+.-..|+|+..|.||+..+ ..+.-.+++.++
T Consensus 82 DlLVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgV 118 (196)
T PRK00756 82 DLLVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGV 118 (196)
T ss_pred ceeEEEeeeeeeccccccccchhhH-HHHHHHHHhcCC
Confidence 3467788999999999999998866 566666655554
No 118
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=64.79 E-value=5.8 Score=36.75 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=29.6
Q ss_pred ccccCcHHHHHHHHHHHHHH-hCCCcEEEEEeecCC
Q 029039 163 SLRQMGIGRMIVQRILRMLT-SREIYDIAALCSEEE 197 (200)
Q Consensus 163 ~yrgqGIG~~Ll~~l~~~~~-~~gi~~I~L~t~~~~ 197 (200)
+||.||.|..||++++..++ +.|..+|.+.+....
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGt 533 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGT 533 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccch
Confidence 69999999999999999997 568888888765443
No 119
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=64.43 E-value=28 Score=36.47 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=48.0
Q ss_pred cCCCCeEEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEeec
Q 029039 133 TPSNGQLVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCSE 195 (200)
Q Consensus 133 ~~~~g~lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~~ 195 (200)
.+.+|+++||+.+...+.....|+-+--+|+. =.|+-.-|+.++++++++.|+..+.|-..+
T Consensus 426 ~d~~G~i~af~s~~p~~~~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg~AP 487 (1094)
T PRK02983 426 HDADGQVVALLSFVPWGRRGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLNFAV 487 (1094)
T ss_pred ECCCCeEEEEEEEeeeCCCCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEechhh
Confidence 35689999999988654434455444445664 799999999999999999999999986543
No 120
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=63.57 E-value=32 Score=29.81 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=35.7
Q ss_pred CCCeEEEEEEEEeCC-CcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEEEee
Q 029039 135 SNGQLVGFGRAVSDV-GLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAALCS 194 (200)
Q Consensus 135 ~~g~lVGf~~~~~d~-~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L~t~ 194 (200)
.+|+++||+.+..-+ .....|+-.--+|+ -=+|+-..|+.++++.+++.|+..|.|-..
T Consensus 188 ~dgki~af~~~~~~~~~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg~a 247 (299)
T PF09924_consen 188 ADGKIVAFAIGSPLGGRDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLGFA 247 (299)
T ss_dssp -TTEEEEEEEEEEEE-TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE----
T ss_pred CCCcEEEEEEEEEccCCccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEcccc
Confidence 489999999887433 33333333333444 468999999999999999889999886443
No 121
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=63.07 E-value=40 Score=25.74 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=27.9
Q ss_pred CcEEEEEEEeeCccccc-CcHHHHHHHHHHHH
Q 029039 150 GLTASIHDIMVIPSLRQ-MGIGRMIVQRILRM 180 (200)
Q Consensus 150 ~~~a~I~dl~V~P~yrg-qGIG~~Ll~~l~~~ 180 (200)
...+||.-++|.++.|| .|++..+-+++.+.
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~ 68 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLDG 68 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHHc
Confidence 46789999999999997 89999999998874
No 122
>PRK04531 acetylglutamate kinase; Provisional
Probab=47.34 E-value=1.6e+02 Score=27.29 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=32.5
Q ss_pred EEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHH
Q 029039 141 GFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLT 182 (200)
Q Consensus 141 Gf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~ 182 (200)
|.+.+... ...+|+.-++|.++.||.|++..+-+++.+...
T Consensus 300 ~~Aiv~~~-~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~~ 340 (398)
T PRK04531 300 AAAILTET-GGGPYLDKFAVLDDARGEGLGRAVWNVMREETP 340 (398)
T ss_pred EEEEEecC-CCceEeEEEEEccchhhcChHHHHHHHHHhhCC
Confidence 44444332 347899999999999999999999999987653
No 123
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=43.29 E-value=96 Score=27.24 Aligned_cols=54 Identities=11% Similarity=0.161 Sum_probs=41.8
Q ss_pred CCCeEEEEEEE--EeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCCcEEEE
Q 029039 135 SNGQLVGFGRA--VSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREIYDIAA 191 (200)
Q Consensus 135 ~~g~lVGf~~~--~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi~~I~L 191 (200)
..|+||..+.. ..||...+ ..+-||++..+++|+-.+-.=+.++++.|...+.|
T Consensus 158 ~~G~LvAVavtDvL~dGlSsV---Y~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYL 213 (253)
T COG2935 158 GEGKLVAVAVTDVLPDGLSSV---YTFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYL 213 (253)
T ss_pred CCCcEEEEEeeecccCcceeE---EEEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEE
Confidence 36888887753 35654332 34679999999999999888888898889888776
No 124
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=42.69 E-value=92 Score=28.64 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=41.4
Q ss_pred CCCeEEEEEEEEe-------CCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHHHhCCC
Q 029039 135 SNGQLVGFGRAVS-------DVGLTASIHDIMVIPSLRQMGIGRMIVQRILRMLTSREI 186 (200)
Q Consensus 135 ~~g~lVGf~~~~~-------d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~~~~gi 186 (200)
...++|||+.+.. -....+.|--++||.+.|++-+.--|++++-+++...||
T Consensus 141 ~t~klVaFIsa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~i 199 (451)
T COG5092 141 GTQKLVAFISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGI 199 (451)
T ss_pred ccceeEEEEecceeEEEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhh
Confidence 3469999997642 122356788999999999999999999999999875555
No 125
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=36.18 E-value=1.8e+02 Score=21.67 Aligned_cols=43 Identities=14% Similarity=0.079 Sum_probs=33.5
Q ss_pred EEEEEEEEeCCCcEEEEEEEeeCcccccCcHHHHHHHHHHHHH
Q 029039 139 LVGFGRAVSDVGLTASIHDIMVIPSLRQMGIGRMIVQRILRML 181 (200)
Q Consensus 139 lVGf~~~~~d~~~~a~I~dl~V~P~yrgqGIG~~Ll~~l~~~~ 181 (200)
.=|.+.+...+...++|.-++|.++.++.|++..+-+++.+..
T Consensus 20 y~~~AIvt~~~~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~ 62 (98)
T cd03173 20 LEGVAIVTYEGNSIPYLDKFAVSDHLWLNNVTDNIFNLIRKDF 62 (98)
T ss_pred ccEEEEEecCCCCCEEEEEEEEcccccccCHHHHHHHHHHhhC
Confidence 3355544443345789999999999999999999999988763
No 126
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=33.96 E-value=2.1e+02 Score=25.32 Aligned_cols=51 Identities=14% Similarity=0.095 Sum_probs=38.3
Q ss_pred CCeEEEEEEEE-eCCCcEEEEE--EEeeCcccccCcHHHHHH----HHHHHHHHhCCC
Q 029039 136 NGQLVGFGRAV-SDVGLTASIH--DIMVIPSLRQMGIGRMIV----QRILRMLTSREI 186 (200)
Q Consensus 136 ~g~lVGf~~~~-~d~~~~a~I~--dl~V~P~yrgqGIG~~Ll----~~l~~~~~~~gi 186 (200)
+|++|++-.+. .+.....+++ ...|||+++.--+|+.|| +.+.+.|.++|.
T Consensus 181 ~~~P~Aiqlv~k~es~~wv~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k 238 (264)
T PF07395_consen 181 NGQPCAIQLVYKVESPKWVYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGK 238 (264)
T ss_pred CCcceEEEEEEEecCCCeEEEecccCccCcccccCCCccEEEEeeHHHHHHHHHHhCC
Confidence 89999998665 3333344444 457899999999999985 788888877764
No 127
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=25.99 E-value=2.9e+02 Score=27.58 Aligned_cols=24 Identities=25% Similarity=0.300 Sum_probs=18.5
Q ss_pred cccccccCCCCeEEEEEEEEeCCC
Q 029039 127 QRVVPVTPSNGQLVGFGRAVSDVG 150 (200)
Q Consensus 127 ~~~~~~~~~~g~lVGf~~~~~d~~ 150 (200)
.+|.++.++++++||++.+..|..
T Consensus 731 ~lC~v~~de~~~i~gYa~a~~Dvt 754 (891)
T KOG3698|consen 731 HLCEVVDDEGHKIVGYASAHFDVT 754 (891)
T ss_pred hheeeeecCCCceeEEeeeecccc
Confidence 467777778899999998776654
No 128
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=21.36 E-value=1.9e+02 Score=26.01 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=37.8
Q ss_pred CCeEEEEEEEE-eCCCcEEEEE--EEeeCcccccCcHHHHHH----HHHHHHHHhCCC
Q 029039 136 NGQLVGFGRAV-SDVGLTASIH--DIMVIPSLRQMGIGRMIV----QRILRMLTSREI 186 (200)
Q Consensus 136 ~g~lVGf~~~~-~d~~~~a~I~--dl~V~P~yrgqGIG~~Ll----~~l~~~~~~~gi 186 (200)
+|+++++-.+. .+.....+++ ...|||++..--+|+-|| +.+.+.|+.+|.
T Consensus 211 ~~~PcA~qlv~k~eSp~wi~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~K 268 (298)
T PRK15312 211 EGIPCAFDIVLKSESQMNVYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQERQK 268 (298)
T ss_pred CCcceEEEEEEEecCCCcEEEecccCccCcccccCCCccEEEEecHHHHHHHHHhcCC
Confidence 89999998665 3333334443 557999999999999985 777888877664
No 129
>PF04146 YTH: YT521-B-like domain; InterPro: IPR007275 A protein of the YTH family has been shown to selectively remove transcripts of meiosis-specific genes expressed in mitotic cells []. It has been speculated that in higher eukaryotic YTH-family members may be involved in similar mechanaisms to suppress gene regulation during gametogenesis or general silencing. The rat protein YT521-B, Q9QY02 from SWISSPROT, is a tyrosine-phosphorylated nuclear protein, that interacts with the nuclear transcriptosomal component scaffold attachment factor B, and the 68kDa Src substrate associated during mitosis, Sam68. In vivo splicing assays demonstrated that YT521-B modulates alternative splice site selection in a concentration-dependent manner []. The domain is predicted to have four alpha helices and six beta strands []. In plant cells environmental stimuli, which light, pathogens, hormones, and abiotic stresses, elicit changes in the cytosolic Ca levels but little is known of the cytosolic-nuclear Ca-signaling pathway; where gene regulation occurs to respond appropriately to the stress. It has been demonstrated that two novel Arabidopsis thaliana (Mouse-ear cress) proteins, (ECT1 and ECT2), specifically associated with Calcineurin B-Like-Interacting Protein Kinase1 (CIPK1), a member of Ser/Thr protein kinases that interact with the calcineurin B-like Ca-binding proteins. These two proteins contain a very similar C-terminal region (180 amino acids in length, 81% similarity), which is required and sufficient for both interaction with CIPK1 and translocation to the nucleus. This domain, the YTH-domain, is conserved across all eukaryotes and suggests that the conserved C-terminal region plays a critical role in relaying the cytosolic Ca-signals to the nucleus, thereby regulating gene expression [].; PDB: 2YUD_A 2YU6_A.
Probab=20.88 E-value=2.9e+02 Score=21.52 Aligned_cols=38 Identities=29% Similarity=0.343 Sum_probs=26.6
Q ss_pred ccCCHHHHHHHHhcCCcEEEEEecCCCCCchhhhhhccccccccccccccccCCCCeEEEEEEEEe
Q 029039 82 EAVDIDKLCLALSHSFVVVSVFSNLALSDDESSKRLMVPLLGNLAQRVVPVTPSNGQLVGFGRAVS 147 (200)
Q Consensus 82 ~~~~~~~l~~~L~~s~~~v~~~~~~~~~~d~~~~~~~~~g~~~~~~~~~~~~~~~g~lVGf~~~~~ 147 (200)
.+....+|.+++..+..++.+|.. ...|...|++++.+
T Consensus 27 ~~~~~~~L~~Af~~~~~V~L~FSv----------------------------n~S~~F~G~A~M~s 64 (140)
T PF04146_consen 27 QPKNEKKLNEAFKESRNVYLFFSV----------------------------NGSGHFQGYARMTS 64 (140)
T ss_dssp -CCCHHHHHHHHHHSS-EEEEEEE----------------------------TTTSEEEEEEEEEC
T ss_pred cccchHHHHHHHHhCCCEEEEEee----------------------------cCcceEEEEEEEcc
Confidence 456788999999887655555531 15689999999875
Done!