BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029041
(200 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543308|ref|XP_002512717.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223548678|gb|EEF50169.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/198 (93%), Positives = 194/198 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAKFKLCK
Sbjct: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKITEFIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATR+GNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRMGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A + +AA
Sbjct: 246 LSIIEEARKRLAASQTAA 263
>gi|255549228|ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4, putative [Ricinus communis]
Length = 263
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/198 (93%), Positives = 193/198 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAKFKLCK
Sbjct: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A A + A
Sbjct: 246 LSIIEEARKRLAAAQAVA 263
>gi|449509213|ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/199 (92%), Positives = 192/199 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAKFKLCK
Sbjct: 66 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR A ++ A
Sbjct: 246 LTIIEEARKRLASQSAVTA 264
>gi|357468567|ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355505623|gb|AES86765.1| 40S ribosomal protein S4 [Medicago truncatula]
Length = 264
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/199 (91%), Positives = 191/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L++IEEARKRQA AA
Sbjct: 246 LTVIEEARKRQAAQNVTAA 264
>gi|192912988|gb|ACF06602.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/198 (91%), Positives = 192/198 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK
Sbjct: 66 MQRHVMVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NT+DGRTIRYPDPLIKANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDALGHEFATR+GNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHLQDALGHEFATRIGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A + +AA
Sbjct: 246 LSIIEEARKRLAASGAAA 263
>gi|224087813|ref|XP_002308235.1| predicted protein [Populus trichocarpa]
gi|222854211|gb|EEE91758.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/198 (90%), Positives = 193/198 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKRQA + +AA
Sbjct: 246 LSIIEEARKRQAASQTAA 263
>gi|192912992|gb|ACF06604.1| 40S ribosomal protein S4 [Elaeis guineensis]
Length = 265
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/198 (92%), Positives = 190/198 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFG KGIPY+NTYDGRTIRYPDPLIKANDTIKLDLET KI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGHKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETYKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHLQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A + +AA
Sbjct: 246 LSIIEEARKRLAASGAAA 263
>gi|449465358|ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496881|ref|XP_004160252.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/199 (91%), Positives = 190/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK+KLCK
Sbjct: 66 MQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A + A
Sbjct: 246 LSIIEEARKRLASQATVTA 264
>gi|73759787|dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
Length = 264
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/199 (90%), Positives = 189/199 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIADFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFET+HIQD+LGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETVHIQDSLGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR ++ A
Sbjct: 246 LTIIEEARKRNVAQSATTA 264
>gi|356496247|ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Glycine max]
Length = 264
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/199 (90%), Positives = 189/199 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVF IGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFIIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A A
Sbjct: 246 LSIIEEARKRLAAQNETVA 264
>gi|356559288|ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 190/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A + AA
Sbjct: 246 LSIIEEARKRIAAQQATAA 264
>gi|297736557|emb|CBI25428.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/199 (89%), Positives = 191/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCK
Sbjct: 48 MQRHIFVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 108 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKG+FETIHIQDA GHEFATRLGNVF IGKGTKPWVSLPKGKGIK
Sbjct: 168 GRNRGRVGVIKNREKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIK 227
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR A +++A
Sbjct: 228 LSIIEEAKKRLAAQAASSA 246
>gi|225448546|ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/199 (89%), Positives = 191/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCK
Sbjct: 66 MQRHIFVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKG+FETIHIQDA GHEFATRLGNVF IGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR A +++A
Sbjct: 246 LSIIEEAKKRLAAQAASSA 264
>gi|449465362|ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
gi|449496878|ref|XP_004160251.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/198 (91%), Positives = 192/198 (96%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKT+PAGFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK+KLCK
Sbjct: 66 MQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQDA GHEFATRLGNVFT+GKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR LA+ AA
Sbjct: 246 LSIIEEARKR--LASQAA 261
>gi|351725821|ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max]
gi|22138108|gb|AAM93434.1| 40S ribosomal S4 protein [Glycine max]
gi|255641970|gb|ACU21252.1| unknown [Glycine max]
Length = 264
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/199 (89%), Positives = 190/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QD+ GHEFATR+GNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A + AA
Sbjct: 246 LSIIEEARKRIAAQQATAA 264
>gi|225434482|ref|XP_002275063.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 191/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREK KGSFETIH+QDA GHEFATRLGNVF IGKGTKPWV+LPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR A +++A
Sbjct: 246 LSIIEEAQKRLAAQAASSA 264
>gi|255647667|gb|ACU24295.1| unknown [Glycine max]
Length = 264
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/199 (89%), Positives = 189/199 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDT+KLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A + A
Sbjct: 246 LSIIEEARKRIAAQQATTA 264
>gi|356551387|ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
Length = 264
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/199 (89%), Positives = 189/199 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDT+KLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A + A
Sbjct: 246 LSIIEEARKRIAAQQATTA 264
>gi|297745843|emb|CBI15899.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 191/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK
Sbjct: 48 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 108 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREK KGSFETIH+QDA GHEFATRLGNVF IGKGTKPWV+LPKGKGIK
Sbjct: 168 GRNRGRVGVIKNREKRKGSFETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIK 227
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR A +++A
Sbjct: 228 LSIIEEAQKRLAAQAASSA 246
>gi|118484853|gb|ABK94293.1| unknown [Populus trichocarpa]
Length = 263
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/198 (89%), Positives = 191/198 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEA+KR A + +AA
Sbjct: 246 LSIIEEAKKRLAASQAAA 263
>gi|224125756|ref|XP_002329710.1| predicted protein [Populus trichocarpa]
gi|222870618|gb|EEF07749.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/198 (89%), Positives = 190/198 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A + + A
Sbjct: 246 LSIIEEARKRLAASQATA 263
>gi|225439460|ref|XP_002268192.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
Length = 264
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/199 (89%), Positives = 190/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQFGQKGIPY+NTYDGRTIRYPDPLIKANDT+KLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VKGVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTVKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IK+REKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTKPWV+LPKGKGIK
Sbjct: 186 GRNRGRVGVIKSREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR A SA A
Sbjct: 246 LSIIEEAKKRLAAQASATA 264
>gi|363806782|ref|NP_001242281.1| uncharacterized protein LOC100812132 [Glycine max]
gi|255645121|gb|ACU23059.1| unknown [Glycine max]
Length = 264
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/199 (89%), Positives = 189/199 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+ D+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVIDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A + AA
Sbjct: 246 LSIIEEARKRIAAQQATAA 264
>gi|255648349|gb|ACU24626.1| unknown [Glycine max]
Length = 264
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/199 (89%), Positives = 188/199 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMD VSIPKTNENF LLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR+GNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEARKR A + AA
Sbjct: 246 LSIIEEARKRIAAQQATAA 264
>gi|224122992|ref|XP_002318967.1| predicted protein [Populus trichocarpa]
gi|222857343|gb|EEE94890.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 191/199 (95%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR LA S AA
Sbjct: 246 LSIIEEAKKR--LAASQAA 262
>gi|10177019|dbj|BAB10257.1| ribosomal protein S4 [Arabidopsis thaliana]
Length = 244
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 48 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 108 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 168 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 227
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 228 LTIIEEARKR--LASQQAA 244
>gi|15237195|ref|NP_200650.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
gi|115311859|sp|Q8VYK6.2|RS43_ARATH RecName: Full=40S ribosomal protein S4-3
gi|16226259|gb|AAL16117.1|AF428285_1 AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|21592333|gb|AAM64284.1| ribosomal protein S4-like [Arabidopsis thaliana]
gi|332009668|gb|AED97051.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
Length = 262
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 246 LTIIEEARKR--LASQQAA 262
>gi|224139252|ref|XP_002323021.1| predicted protein [Populus trichocarpa]
gi|222867651|gb|EEF04782.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/199 (89%), Positives = 192/199 (96%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+R++EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR LA S AA
Sbjct: 246 LSIIEEAKKR--LAASQAA 262
>gi|17979233|gb|AAL49933.1| AT5g58420/mqj2_10 [Arabidopsis thaliana]
gi|23505827|gb|AAN28773.1| At5g58420/mqj2_10 [Arabidopsis thaliana]
Length = 262
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 246 LTIIEEARKR--LASQQAA 262
>gi|79327186|ref|NP_001031846.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|332003725|gb|AED91108.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 244
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 48 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 108 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 168 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 227
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 228 LTIIEEARKR--LASQQAA 244
>gi|82400118|gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
Length = 264
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/199 (88%), Positives = 190/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCK
Sbjct: 66 MQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEA+KR A ++ A
Sbjct: 246 LTIIEEAKKRLAAQSATPA 264
>gi|9759565|dbj|BAB11167.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
Length = 263
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 67 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 126
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 127 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 186
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 187 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 246
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 247 LTIIEEARKR--LASQQAA 263
>gi|18415395|ref|NP_568179.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
gi|20143904|sp|P49204.4|RS42_ARATH RecName: Full=40S ribosomal protein S4-2
gi|7546687|emb|CAB87265.1| ribosomal protein S4 [Arabidopsis thaliana]
gi|15292999|gb|AAK93610.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|17979543|gb|AAL50106.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|19310835|gb|AAL85148.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|20147251|gb|AAM10339.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
gi|21537414|gb|AAM61755.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
gi|332003724|gb|AED91107.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
Length = 262
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 246 LTIIEEARKR--LASQQAA 262
>gi|1173257|sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4
gi|457803|emb|CAA54095.1| ribosomal protein S4 [Solanum tuberosum]
Length = 264
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/199 (88%), Positives = 190/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCK
Sbjct: 66 MQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIE+ARKR A ++ A
Sbjct: 246 LTIIEDARKRLAAQSATPA 264
>gi|227206132|dbj|BAH57121.1| AT5G07090 [Arabidopsis thaliana]
Length = 197
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 1 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 61 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 121 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 180
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 181 LTIIEEARKR--LASQQAA 197
>gi|297793379|ref|XP_002864574.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297310409|gb|EFH40833.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/192 (92%), Positives = 185/192 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEA+FKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAQFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+IIEEARKR A
Sbjct: 246 LTIIEEARKRLA 257
>gi|346470359|gb|AEO35024.1| hypothetical protein [Amblyomma maculatum]
Length = 265
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/190 (93%), Positives = 186/190 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCK
Sbjct: 66 MQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLI+ANDTIKLDLETNKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLETNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKG+FETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGI
Sbjct: 186 GRNTGRVGVIKNREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIM 245
Query: 181 LSIIEEARKR 190
L+IIEEARKR
Sbjct: 246 LTIIEEARKR 255
>gi|297806729|ref|XP_002871248.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297317085|gb|EFH47507.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/199 (89%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIP++NTYDGRTIRYPDPLIK NDT+KLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPFLNTYDGRTIRYPDPLIKPNDTVKLDLEENKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKGTKPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWMSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 246 LTIIEEARKR--LASQQAA 262
>gi|18398393|ref|NP_565414.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|75163156|sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1
gi|13877537|gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana]
gi|14334916|gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17104537|gb|AAL34157.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|17978689|gb|AAL47338.1| unknown protein [Arabidopsis thaliana]
gi|21536498|gb|AAM60830.1| putative ribosomal protein S4 [Arabidopsis thaliana]
gi|330251522|gb|AEC06616.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 261
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/190 (92%), Positives = 184/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
L+IIEEARKR
Sbjct: 246 LTIIEEARKR 255
>gi|118480993|gb|ABK92450.1| unknown [Populus trichocarpa]
Length = 263
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/198 (87%), Positives = 191/198 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+R++EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKF VGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFGVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEA++R A + +AA
Sbjct: 246 LSIIEEAKERLAASQAAA 263
>gi|224135847|ref|XP_002322175.1| predicted protein [Populus trichocarpa]
gi|222869171|gb|EEF06302.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/198 (88%), Positives = 189/198 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTDKTYP+GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+R++EAKFKLCK
Sbjct: 66 MQRHVFVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE KI ++IKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENYKIVDYIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEA+KR A + +AA
Sbjct: 246 LSIIEEAKKRLAASQNAA 263
>gi|297832340|ref|XP_002884052.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
gi|297329892|gb|EFH60311.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/190 (92%), Positives = 184/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIP++NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPFLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
L+IIEEARKR
Sbjct: 246 LTIIEEARKR 255
>gi|357506135|ref|XP_003623356.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355498371|gb|AES79574.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388496326|gb|AFK36229.1| unknown [Medicago truncatula]
Length = 265
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/191 (90%), Positives = 184/191 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLEQNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG IKNR+KH G+FETIH+QDA GHEFATRLGNVFTIG+G KPWVSLPKG+GIK
Sbjct: 186 GRNRGRVGFIKNRKKHMGTFETIHVQDAAGHEFATRLGNVFTIGRGPKPWVSLPKGRGIK 245
Query: 181 LSIIEEARKRQ 191
L++IEEARKR
Sbjct: 246 LTVIEEARKRM 256
>gi|257815610|gb|ACV70143.1| putative 40S ribosomal protein S4 [Jatropha curcas]
Length = 264
Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/186 (94%), Positives = 181/186 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLV KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCK
Sbjct: 66 MQRHVLVVGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQDA G EFATRLGNVFTIGKGTKPWVS PKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDATGPEFATRLGNVFTIGKGTKPWVSFPKGKGIK 245
Query: 181 LSIIEE 186
LSIIEE
Sbjct: 246 LSIIEE 251
>gi|3914899|sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4
gi|2331301|gb|AAB66899.1| ribosomal protein S4 type I [Zea mays]
gi|194698488|gb|ACF83328.1| unknown [Zea mays]
gi|195618184|gb|ACG30922.1| 40S ribosomal protein S4 [Zea mays]
gi|195625650|gb|ACG34655.1| 40S ribosomal protein S4 [Zea mays]
gi|413932477|gb|AFW67028.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 265
Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/190 (90%), Positives = 184/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>gi|242032315|ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
gi|241917406|gb|EER90550.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
Length = 264
Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/190 (90%), Positives = 184/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>gi|1173256|sp|P46299.1|RS4_GOSHI RecName: Full=40S ribosomal protein S4
gi|488739|emb|CAA55882.1| ribosomal protein, small subunit 4e (RS4e) [Gossypium hirsutum]
Length = 262
Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 175/197 (88%), Positives = 185/197 (93%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH+I +E KFKLCK
Sbjct: 66 MQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK KGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIK 245
Query: 181 LSIIEEARKRQALATSA 197
LSIIEEARKR A +A
Sbjct: 246 LSIIEEARKRLAAQNAA 262
>gi|242052937|ref|XP_002455614.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
gi|241927589|gb|EES00734.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
Length = 265
Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 171/190 (90%), Positives = 183/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDV+SIPKT EN+RLLYDTKGRFRLHS+RDE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPSGFMDVISIPKTGENYRLLYDTKGRFRLHSVRDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFETIH++DALGH FATR+GNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRMGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>gi|326500636|dbj|BAJ94984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 169/190 (88%), Positives = 184/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH++VD KVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AKFKLCK
Sbjct: 66 MQRHIMVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
L+IIEE RKR
Sbjct: 246 LTIIEEQRKR 255
>gi|115436514|ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|53791616|dbj|BAD52963.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113532546|dbj|BAF04929.1| Os01g0358400 [Oryza sativa Japonica Group]
gi|125525886|gb|EAY74000.1| hypothetical protein OsI_01884 [Oryza sativa Indica Group]
gi|125570348|gb|EAZ11863.1| hypothetical protein OsJ_01737 [Oryza sativa Japonica Group]
gi|149391309|gb|ABR25672.1| 40S ribosomal protein S4 [Oryza sativa Indica Group]
gi|215692713|dbj|BAG88133.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/190 (90%), Positives = 182/190 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFETIH++DALGH FATRLGNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>gi|115443689|ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|109940160|sp|P49398.3|RS4_ORYSJ RecName: Full=40S ribosomal protein S4; AltName: Full=SCAR protein
SS620
gi|313103631|pdb|3IZ6|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|50252099|dbj|BAD28085.1| putative ribosomal protein S4 [Oryza sativa Japonica Group]
gi|113535155|dbj|BAF07538.1| Os02g0105900 [Oryza sativa Japonica Group]
gi|125537716|gb|EAY84111.1| hypothetical protein OsI_05494 [Oryza sativa Indica Group]
gi|125580492|gb|EAZ21423.1| hypothetical protein OsJ_05027 [Oryza sativa Japonica Group]
gi|169244433|gb|ACA50490.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
gi|215678909|dbj|BAG96339.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215734827|dbj|BAG95549.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415995|gb|ADM86872.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 265
Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 170/190 (89%), Positives = 183/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDP+IKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFETIH++DALGH+FATRLGNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>gi|242087691|ref|XP_002439678.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
gi|241944963|gb|EES18108.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
Length = 263
Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/198 (86%), Positives = 187/198 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V+VD KVRTDKTYP+GFMDVVSIPKT ENFRLLYDTKGRFRLHSIRD+EAKFK+CK
Sbjct: 66 MQRLVMVDGKVRTDKTYPSGFMDVVSIPKTGENFRLLYDTKGRFRLHSIRDDEAKFKMCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIP++NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPFLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IK+REKHKGSFETIH++D+LGH+FATR+GNVFTIGK KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKSREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKDKKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A A + A
Sbjct: 246 LSIIEEARKRNAEAAAEA 263
>gi|222631333|gb|EEE63465.1| hypothetical protein OsJ_18278 [Oryza sativa Japonica Group]
Length = 398
Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 171/198 (86%), Positives = 186/198 (93%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AKFKLCK
Sbjct: 201 MQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCK 260
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGN+VMVTG
Sbjct: 261 VRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTG 320
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIK
Sbjct: 321 GRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIK 380
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A A + A
Sbjct: 381 LSIIEEARKRNAEAAAEA 398
>gi|44894458|gb|AAS48726.1| ribosomal protein S4 [Zea mays]
Length = 265
Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 170/190 (89%), Positives = 182/190 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPPIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGS ETIH++D+LGH+FATR+GNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSLETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>gi|125552065|gb|EAY97774.1| hypothetical protein OsI_19685 [Oryza sativa Indica Group]
Length = 279
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/198 (86%), Positives = 186/198 (93%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AKFKLCK
Sbjct: 82 MQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCK 141
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 142 VRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNVVMVTG 201
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIK
Sbjct: 202 GRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIK 261
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A A + A
Sbjct: 262 LSIIEEARKRNAEAAAEA 279
>gi|47777385|gb|AAT38019.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 245
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/198 (86%), Positives = 186/198 (93%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AKFKLCK
Sbjct: 48 MQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGN+VMVTG
Sbjct: 108 VRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIK
Sbjct: 168 GRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIK 227
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A A + A
Sbjct: 228 LSIIEEARKRNAEAAAEA 245
>gi|115463485|ref|NP_001055342.1| Os05g0368300 [Oryza sativa Japonica Group]
gi|113578893|dbj|BAF17256.1| Os05g0368300 [Oryza sativa Japonica Group]
Length = 263
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/198 (86%), Positives = 186/198 (93%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYPAGFMDVVSI KT ENFRLLYDTKGRFRLHSI+DE+AKFKLCK
Sbjct: 66 MQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIP++NT DGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGN+VMVTG
Sbjct: 126 VRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IK+REKHKGSFETIH++DALGH+FATR+GNVFTIGK KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSIIEEARKR A A + A
Sbjct: 246 LSIIEEARKRNAEAAAEA 263
>gi|357134623|ref|XP_003568916.1| PREDICTED: 40S ribosomal protein S4-like [Brachypodium distachyon]
Length = 265
Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 167/190 (87%), Positives = 183/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR +LVD KVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE++KFKLCK
Sbjct: 66 MQRQILVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDSKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
L+IIEE RKR
Sbjct: 246 LTIIEEQRKR 255
>gi|357483185|ref|XP_003611879.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|357516021|ref|XP_003628299.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|217074206|gb|ACJ85463.1| unknown [Medicago truncatula]
gi|355513214|gb|AES94837.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|355522321|gb|AET02775.1| 40S ribosomal protein S4 [Medicago truncatula]
gi|388493800|gb|AFK34966.1| unknown [Medicago truncatula]
gi|388509492|gb|AFK42812.1| unknown [Medicago truncatula]
Length = 265
Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 168/186 (90%), Positives = 181/186 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDTKGRFRLHSVRDDEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDP+I+ANDTIKLDLE NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G+NRGRVG+IKNREKHKG+FETIH+QDA GHEFATRL NVFTIGKGTKPWVSLPKGKGIK
Sbjct: 186 GKNRGRVGVIKNREKHKGTFETIHVQDATGHEFATRLVNVFTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEE 186
L++IEE
Sbjct: 246 LTVIEE 251
>gi|48596901|dbj|BAD22763.1| ribosomal protein [Bromus inermis]
Length = 265
Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 166/190 (87%), Positives = 183/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH++VD KVRTDKTYPAGFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AK+KLCK
Sbjct: 66 MQRHIMVDGKVRTDKTYPAGFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NT DGRTIRYPDPLIKANDTIKLDLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTNDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKG+FETIH++DA GH+FATRLGNVFTIGKGTKPWV+LPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVTLPKGKGIK 245
Query: 181 LSIIEEARKR 190
L+IIEE RKR
Sbjct: 246 LTIIEEQRKR 255
>gi|2345154|gb|AAB67831.1| ribsomal protein S4 [Zea mays]
gi|194707820|gb|ACF87994.1| unknown [Zea mays]
gi|195607094|gb|ACG25377.1| 40S ribosomal protein S4 [Zea mays]
gi|195653033|gb|ACG45984.1| 40S ribosomal protein S4 [Zea mays]
gi|414873848|tpg|DAA52405.1| TPA: ribosomal protein S4 [Zea mays]
Length = 265
Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 167/190 (87%), Positives = 182/190 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRLH IRDE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTMENYRLLYDTKGRFRLHPIRDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKG F+TIH++D++GH+FATR+GNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGGFDTIHVEDSMGHQFATRMGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE R+R
Sbjct: 246 LSIIEEQRRR 255
>gi|116779177|gb|ABK21170.1| unknown [Picea sitchensis]
gi|116781965|gb|ABK22318.1| unknown [Picea sitchensis]
gi|148909584|gb|ABR17884.1| unknown [Picea sitchensis]
Length = 263
Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 166/191 (86%), Positives = 177/191 (92%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRFRLHSI+DEEAK+KLCK
Sbjct: 66 MQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFG KGIPY+NTYDGRTIRYPDPL+KANDTIK+DLET KI EFIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKIDLETGKIKEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTKPWVSLPKGKG+K
Sbjct: 186 GRNRGRVGVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVK 245
Query: 181 LSIIEEARKRQ 191
LSIIEEARKR
Sbjct: 246 LSIIEEARKRH 256
>gi|116781974|gb|ABK22322.1| unknown [Picea sitchensis]
gi|116782831|gb|ABK22679.1| unknown [Picea sitchensis]
gi|224284198|gb|ACN39835.1| unknown [Picea sitchensis]
gi|224285571|gb|ACN40504.1| unknown [Picea sitchensis]
gi|224286248|gb|ACN40833.1| unknown [Picea sitchensis]
Length = 263
Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 165/191 (86%), Positives = 177/191 (92%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRFRLHSI+DEEAK+KLCK
Sbjct: 66 MQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFG KGIPY+NTYDGRTIRYPDPL+KANDTIK+DLET KI EFIKFDVGNV+MVTG
Sbjct: 126 VRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKVDLETGKIKEFIKFDVGNVIMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTKPWVSLPKGKG+K
Sbjct: 186 GRNRGRVGVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVK 245
Query: 181 LSIIEEARKRQ 191
LSIIEEARKR
Sbjct: 246 LSIIEEARKRH 256
>gi|17367482|sp|O81363.1|RS4_PRUAR RecName: Full=40S ribosomal protein S4
gi|3264763|gb|AAC24585.1| 40S ribosomal protein S4 [Prunus armeniaca]
Length = 261
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/190 (88%), Positives = 178/190 (93%), Gaps = 4/190 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+LVD K+ + DVVSIPKTNENFRLLYDTKGRFRLHSIRDEE+KFKLCK
Sbjct: 66 MQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESKFKLCK 121
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT+FIKFDVGNVVMVTG
Sbjct: 122 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNVVMVTG 181
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 182 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 241
Query: 181 LSIIEEARKR 190
L+I+EEA+KR
Sbjct: 242 LTILEEAKKR 251
>gi|449460918|ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 216
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/178 (91%), Positives = 171/178 (96%)
Query: 22 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 81
+DVVSIPKT+ENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPY+NTYDGRT
Sbjct: 39 LDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRT 98
Query: 82 IRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
IRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFE
Sbjct: 99 IRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 158
Query: 142 TIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAAA 199
TIHIQDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL+IIEEARKR A ++ A
Sbjct: 159 TIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSAVTA 216
>gi|168014621|ref|XP_001759850.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688980|gb|EDQ75354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 148/198 (74%), Positives = 177/198 (89%), Gaps = 1/198 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH+I EEAK+KLCK
Sbjct: 66 MQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS QFG KG+PYI T+DGRTIRYPDPLIKANDT+K++LET K+ EFIKFD+GN+VMVTG
Sbjct: 126 VRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGR+G+I++REKHKGSF+ IH+ D+ G +FATR+GNVFT+G+GTKPW++LP+GKGIK
Sbjct: 186 GRNRGRIGVIQHREKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPRGKGIK 245
Query: 181 LSIIEEARKR-QALATSA 197
LSI+EEA+KR QAL SA
Sbjct: 246 LSIVEEAKKRTQALKASA 263
>gi|168057168|ref|XP_001780588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667954|gb|EDQ54571.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 146/198 (73%), Positives = 176/198 (88%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH I EEAK+KLCK
Sbjct: 66 MQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS QFG KG+PYI T+DGRTIRYPDPLIKANDT+K++LET K+ EFIKFD+GN+VMVTG
Sbjct: 126 VRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGR+G+I++REKHKGSF+ IH+ D+ G++FATR+GNVFTIG+GTKPW++LP+GKGIK
Sbjct: 186 GRNRGRIGVIQHREKHKGSFDIIHVTDSTGNQFATRMGNVFTIGQGTKPWITLPRGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI+EEA+KR+A+ A
Sbjct: 246 LSIVEEAKKRKAVTNQVA 263
>gi|168066840|ref|XP_001785339.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663064|gb|EDQ49851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 145/198 (73%), Positives = 176/198 (88%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH I EEAK+KLCK
Sbjct: 66 MQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR+ QFG KG+P++ T+DGRTIRYPDPLIKANDT+K++LET K+ EFIKFD+GN+VMVTG
Sbjct: 126 VRAAQFGDKGVPHVTTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGR+G+I +REKHKGSF+ IH+ DA+G++FATR+GNVFTIG+GTKPW++LP+GKGIK
Sbjct: 186 GRNRGRIGVIHHREKHKGSFDIIHVTDAIGNQFATRMGNVFTIGQGTKPWITLPRGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI+EEA+KR+A AA
Sbjct: 246 LSIVEEAKKRKATEKQAA 263
>gi|168027041|ref|XP_001766039.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682682|gb|EDQ69098.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 308
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 147/198 (74%), Positives = 175/198 (88%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH I EEAK+KLCK
Sbjct: 66 MQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LET K+ EFIKFDVGN+VMVTG
Sbjct: 126 VRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDVGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGR+G+I +REKHKGSF+ IH+ DA G++FATR+GNV+TIG+GTKPW++LP+GKGIK
Sbjct: 186 GRNRGRIGVIHHREKHKGSFDIIHVTDATGNQFATRMGNVYTIGQGTKPWITLPRGKGIK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI+EEA+KR+A AA
Sbjct: 246 LSIVEEAKKRKATLKQAA 263
>gi|167998342|ref|XP_001751877.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696975|gb|EDQ83312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 147/198 (74%), Positives = 177/198 (89%), Gaps = 1/198 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH+I EEAK+KLCK
Sbjct: 66 MQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LET K+ EFIKFD+GN+VMVTG
Sbjct: 126 VRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGR+G+I++REKHKGSF+ IH+ DA G +FATR+GNVFT+G+GTKPW++LP+GKGIK
Sbjct: 186 GRNRGRIGVIQHREKHKGSFDIIHVTDATGQQFATRMGNVFTVGQGTKPWITLPRGKGIK 245
Query: 181 LSIIEEARKR-QALATSA 197
LSI+EEA+KR QAL +A
Sbjct: 246 LSIVEEAKKRGQALKAAA 263
>gi|302781420|ref|XP_002972484.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
gi|300159951|gb|EFJ26570.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
Length = 258
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/190 (78%), Positives = 174/190 (91%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ + +D KVRTDK YPAGFMDV+++ K +EN+RLLYD+KGRF LHSI EEAKFKLCK
Sbjct: 66 MQKLISIDGKVRTDKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINAEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR+V+FG KGIP++ TYDGRTIRYPDPLIKANDTIK+DLET KI EFIKFDVGNVVMVTG
Sbjct: 126 VRAVRFGAKGIPFLTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG I++REKHKGSF+ IHI+D++G +FATR+GNVFTIG+GTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGTIQHREKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSI+EEARKR
Sbjct: 246 LSIVEEARKR 255
>gi|168014095|ref|XP_001759591.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689130|gb|EDQ75503.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 146/198 (73%), Positives = 177/198 (89%), Gaps = 1/198 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTDK YPAGFMDV+SI KTNENFRLLYD KGRF LH+I EEAK+KLCK
Sbjct: 66 MQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS QFG KG+P+I T+DGRTIRYPDPLIKANDT+K++LET K+ EFIKFD+GN+VMVTG
Sbjct: 126 VRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGR+G+I++REKHKGSF+ IH+ D+ G +FATR+GNVFT+G+GTKPW++LP+GKGIK
Sbjct: 186 GRNRGRIGVIQHREKHKGSFDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPRGKGIK 245
Query: 181 LSIIEEARKR-QALATSA 197
LSI+EEA+KR QAL +A
Sbjct: 246 LSIVEEAKKRTQALKAAA 263
>gi|302805125|ref|XP_002984314.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
gi|300148163|gb|EFJ14824.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
Length = 258
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 149/190 (78%), Positives = 174/190 (91%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ + +D KVRTDK YPAGFMDV+++ K +EN+RLLYD+KGRF LHSI EEAKFKLCK
Sbjct: 66 MQKLISIDGKVRTDKCYPAGFMDVLTVGKVDENYRLLYDSKGRFTLHSINSEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR+V+FG KGIP++ TYDGRTIRYPDPLIKANDTIK+DLET KI EFIKFDVGN+VMVTG
Sbjct: 126 VRAVRFGAKGIPFLTTYDGRTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG I++REKHKGSF+ IHI+D++G +FATR+GNVFTIG+GTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGTIQHREKHKGSFDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSI+EEARKR
Sbjct: 246 LSIVEEARKR 255
>gi|431912035|gb|ELK14176.1| Protein DBF4 like protein B [Pteropus alecto]
Length = 980
Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats.
Identities = 133/199 (66%), Positives = 161/199 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+I EE KR A S+ A
Sbjct: 246 LTIAEERDKRLAAKQSSGA 264
>gi|356565689|ref|XP_003551070.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Glycine max]
Length = 230
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 148/159 (93%)
Query: 23 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 82
+ VSIPKTNEN RLLYDTKGRFRLHSIRD+EAKFKLCKVRSV FG KGIPY+NTYDGRTI
Sbjct: 14 EAVSIPKTNENIRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVXFGPKGIPYLNTYDGRTI 73
Query: 83 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 142
YPDPLI+ANDT+KLDLE +++ FIKFDVGNVVMVTGGRNRG VG+IKNREKHKGSF+T
Sbjct: 74 HYPDPLIRANDTVKLDLEKTRLSIFIKFDVGNVVMVTGGRNRGCVGVIKNREKHKGSFKT 133
Query: 143 IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
IH+QDA GHEFA+R+GNVFTIGKGTKPW+SL KGKGIKL
Sbjct: 134 IHVQDATGHEFASRMGNVFTIGKGTKPWISLAKGKGIKL 172
>gi|344257932|gb|EGW14036.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 335
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 138 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCK 197
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 198 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 257
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 258 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 317
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 318 LTIAEERDKRLAAKQSSG 335
>gi|384487368|gb|EIE79548.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 133/186 (71%), Positives = 156/186 (83%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+S+ KT ENFRL+YD KGRF +H I DEEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+PYI T+DGRTIRYPDPLIK NDTI+ ++ET KI +F+KFDVGNVVMVTG
Sbjct: 126 VKKVMIGSKGVPYITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G KPW+SLPKGKG+K
Sbjct: 186 GRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPKGKGVK 245
Query: 181 LSIIEE 186
LSI EE
Sbjct: 246 LSITEE 251
>gi|384499638|gb|EIE90129.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
Length = 262
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 133/186 (71%), Positives = 156/186 (83%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+S+ KT ENFRL+YD KGRF +H I DEEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDSTFPAGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+PYI T+DGRTIRYPDPLIK NDTI+ ++ET KI +F+KFDVGNVVMVTG
Sbjct: 126 VKKVMIGSKGVPYITTHDGRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G KPW+SLPKGKG+K
Sbjct: 186 GRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPKGKGVK 245
Query: 181 LSIIEE 186
LSI EE
Sbjct: 246 LSITEE 251
>gi|296212730|ref|XP_002752965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
Length = 263
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR++ +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRYIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|119592221|gb|EAW71815.1| ribosomal protein S4, X-linked, isoform CRA_a [Homo sapiens]
Length = 385
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 160/200 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAAAQ 200
L+I EE KR A S +
Sbjct: 246 LTIAEERDKRLAAKQSRVCE 265
>gi|405967288|gb|EKC32468.1| 40S ribosomal protein S4, X isoform [Crassostrea gigas]
Length = 243
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 132/196 (67%), Positives = 159/196 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VDAKVRTDK +P GFMDV+SI KTNENFRLLYD KGRF +H I+ EEAK+KLC+
Sbjct: 48 MQRLIKVDAKVRTDKNFPTGFMDVISIEKTNENFRLLYDVKGRFTVHRIQKEEAKYKLCR 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V KG+PYI T+DGRTIRYPDPL+K NDT+ LD+ T KI +FIKFD GN+ MVTG
Sbjct: 108 VRKVGVAAKGVPYITTHDGRTIRYPDPLVKVNDTVMLDIGTGKIKDFIKFDSGNLCMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I++RE+H GSF+ +HI+D++GH +ATRL VF IGKG KPW+SLPKGKG+K
Sbjct: 168 GHNLGRVGVIQHRERHPGSFDIVHIKDSVGHTYATRLSYVFVIGKGNKPWISLPKGKGVK 227
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R A TS
Sbjct: 228 LSIAEERDRRLAAKTS 243
>gi|296204918|ref|XP_002749534.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Callithrix jacchus]
Length = 263
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRIKPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPQGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|297735624|emb|CBI18118.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/199 (71%), Positives = 150/199 (75%), Gaps = 41/199 (20%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK
Sbjct: 48 MQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQFGQKGIPY+NTYDGRTIRYPDPLIKANDT
Sbjct: 108 VKGVQFGQKGIPYLNTYDGRTIRYPDPLIKANDT-------------------------- 141
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
HKG+FETIH+QDA GHEFATRLGNVFTIGKGTKPWV+LPKGKGIK
Sbjct: 142 ---------------HKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIK 186
Query: 181 LSIIEEARKRQALATSAAA 199
LSIIEEA+KR A SA A
Sbjct: 187 LSIIEEAKKRLAAQASATA 205
>gi|74179765|dbj|BAE22507.1| unnamed protein product [Mus musculus]
Length = 263
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|431914424|gb|ELK15681.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 245
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 48 MQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITTEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 108 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 168 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 227
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 228 LTIAEERDKRLAAKQSSG 245
>gi|291407691|ref|XP_002720154.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 3
[Oryctolagus cuniculus]
Length = 227
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 30 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 89
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 90 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 149
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 150 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 209
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 210 LTIAEERDKRLAAKQSSG 227
>gi|350539629|ref|NP_001233602.1| 40S ribosomal protein S4 [Cricetulus griseus]
gi|1350996|sp|P47961.2|RS4_CRIGR RecName: Full=40S ribosomal protein S4
gi|453574|dbj|BAA05485.1| ribosomal protein S4 [Cricetulus griseus]
Length = 263
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|402910524|ref|XP_003917924.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Papio anubis]
gi|12846200|dbj|BAB27070.1| unnamed protein product [Mus musculus]
Length = 245
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 48 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 108 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 168 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 227
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 228 LTIAEERDKRLAAKQSSG 245
>gi|417408892|gb|JAA50980.1| Putative 40s ribosomal protein s4, partial [Desmodus rotundus]
Length = 236
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 39 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 98
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 99 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 158
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 159 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 218
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 219 LTIAEERDKRLAAKQSSG 236
>gi|301780256|ref|XP_002925549.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Ailuropoda
melanoleuca]
Length = 304
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 107 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 166
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 167 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 226
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 227 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 286
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 287 LTIAEERDKRLAAKQSSG 304
>gi|48376549|gb|AAH07308.2| RPS4X protein, partial [Homo sapiens]
Length = 243
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 46 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 105
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 106 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 165
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 166 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 225
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 226 LTIAEERDKRLAAKQSSG 243
>gi|337930|gb|AAA36597.1| scar protein [Homo sapiens]
Length = 244
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 47 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 106
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 107 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 166
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 167 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 226
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 227 LTIAEERDKRLAAKQSSG 244
>gi|281338943|gb|EFB14527.1| hypothetical protein PANDA_015068 [Ailuropoda melanoleuca]
Length = 263
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|12851918|dbj|BAB29207.1| unnamed protein product [Mus musculus]
Length = 263
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|950115|gb|AAB01670.1| ribosomal protein S4, partial [Felis catus]
gi|440898938|gb|ELR50333.1| hypothetical protein M91_14309, partial [Bos grunniens mutus]
Length = 262
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 65 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 125 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 185 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 244
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 245 LTIAEERDKRLAAKQSSG 262
>gi|344281914|ref|XP_003412721.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Loxodonta
africana]
Length = 333
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 136 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 195
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 196 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 255
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 256 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 315
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 316 LTIAEERDKRLAAKQSSG 333
>gi|62896517|dbj|BAD96199.1| ribosomal protein S4, X-linked X isoform variant [Homo sapiens]
Length = 263
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|4506725|ref|NP_000998.1| 40S ribosomal protein S4, X isoform X isoform [Homo sapiens]
gi|6677805|ref|NP_033120.1| 40S ribosomal protein S4, X isoform [Mus musculus]
gi|56090273|ref|NP_001007601.1| 40S ribosomal protein S4, X isoform [Rattus norvegicus]
gi|78369408|ref|NP_001030522.1| 40S ribosomal protein S4 [Bos taurus]
gi|255653020|ref|NP_001157422.1| 40S ribosomal protein S4 [Equus caballus]
gi|324021713|ref|NP_001191212.1| ribosomal protein S4 [Sus scrofa]
gi|354725914|ref|NP_001238971.1| 40S ribosomal protein S4, X isoform [Canis lupus familiaris]
gi|388453927|ref|NP_001252551.1| 40S ribosomal protein S4, X isoform [Macaca mulatta]
gi|114689107|ref|XP_001139217.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Pan
troglodytes]
gi|291407689|ref|XP_002720153.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 2
[Oryctolagus cuniculus]
gi|293363046|ref|XP_002730304.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|296235756|ref|XP_002763034.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
gi|332263743|ref|XP_003280912.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Nomascus
leucogenys]
gi|390479927|ref|XP_003735813.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Callithrix jacchus]
gi|392343218|ref|XP_003754823.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
norvegicus]
gi|397467181|ref|XP_003805305.1| PREDICTED: 40S ribosomal protein S4, X isoform [Pan paniscus]
gi|402910522|ref|XP_003917923.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Papio anubis]
gi|410988822|ref|XP_004000676.1| PREDICTED: 40S ribosomal protein S4, X isoform [Felis catus]
gi|426250215|ref|XP_004018833.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426257226|ref|XP_004022233.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
gi|426396382|ref|XP_004064423.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Gorilla
gorilla gorilla]
gi|426396384|ref|XP_004064424.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 2 [Gorilla
gorilla gorilla]
gi|426396386|ref|XP_004064425.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Gorilla
gorilla gorilla]
gi|50401474|sp|Q76MY1.3|RS4X_MACFU RecName: Full=40S ribosomal protein S4, X isoform
gi|50401475|sp|Q76N24.3|RS4X_CERAE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403621|sp|P62703.2|RS4X_RAT RecName: Full=40S ribosomal protein S4, X isoform
gi|50403628|sp|P62701.2|RS4X_HUMAN RecName: Full=40S ribosomal protein S4, X isoform; AltName:
Full=SCR10; AltName: Full=Single copy abundant mRNA
protein
gi|50403629|sp|P62702.2|RS4X_MOUSE RecName: Full=40S ribosomal protein S4, X isoform
gi|50403630|sp|P62704.2|RS4X_MESAU RecName: Full=40S ribosomal protein S4, X isoform
gi|50403631|sp|P62705.2|RS4X_FELCA RecName: Full=40S ribosomal protein S4, X isoform
gi|118572714|sp|P79103.3|RS4_BOVIN RecName: Full=40S ribosomal protein S4
gi|1083572|pir||A55276 ribosomal protein S4 - western wild mouse
gi|2148029|pir||I48169 ribosomal protein S4 - hamster (Mesocricetus sp.)
gi|57135|emb|CAA32427.1| unnamed protein product [Rattus rattus]
gi|200864|gb|AAA40075.1| ribosomal protein S4 [Mus musculus]
gi|220321|dbj|BAA01858.1| ribosomal protein S4 [Mesocricetus sp.]
gi|337510|gb|AAA63255.1| ribosomal protein S4X isoform [Homo sapiens]
gi|2791861|gb|AAB96968.1| ribosomal protein s4 X isoform [Homo sapiens]
gi|4115718|dbj|BAA36501.1| ribosomal protein S4X [Chlorocebus aethiops]
gi|6519820|dbj|BAA87932.1| ribosomal protein S4X (RPS4X) [Macaca fuscata]
gi|12653405|gb|AAH00472.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|12832435|dbj|BAB22106.1| unnamed protein product [Mus musculus]
gi|12846290|dbj|BAB27108.1| unnamed protein product [Mus musculus]
gi|12846695|dbj|BAB27268.1| unnamed protein product [Mus musculus]
gi|14318606|gb|AAH09100.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|26353416|dbj|BAC40338.1| unnamed protein product [Mus musculus]
gi|48145587|emb|CAG33016.1| RPS4X [Homo sapiens]
gi|48735278|gb|AAH71662.1| Ribosomal protein S4, X-linked [Homo sapiens]
gi|55824731|gb|AAH86560.1| Ribosomal protein S4, X-linked [Rattus norvegicus]
gi|71680222|gb|AAI00904.1| RPS4X protein [Homo sapiens]
gi|71681664|gb|AAI00905.1| RPS4X protein [Homo sapiens]
gi|74139944|dbj|BAE31810.1| unnamed protein product [Mus musculus]
gi|74267717|gb|AAI02477.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|77415376|gb|AAI06153.1| Ribosomal protein S4, X-linked [Mus musculus]
gi|90075468|dbj|BAE87414.1| unnamed protein product [Macaca fascicularis]
gi|119592223|gb|EAW71817.1| ribosomal protein S4, X-linked, isoform CRA_c [Homo sapiens]
gi|123993841|gb|ABM84522.1| ribosomal protein S4, X-linked [synthetic construct]
gi|123996497|gb|ABM85850.1| ribosomal protein S4, X-linked [synthetic construct]
gi|148682180|gb|EDL14127.1| mCG116623 [Mus musculus]
gi|148745531|gb|AAI41996.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
gi|149042162|gb|EDL95869.1| rCG36441 [Rattus norvegicus]
gi|189053066|dbj|BAG34688.1| unnamed protein product [Homo sapiens]
gi|193783638|dbj|BAG53549.1| unnamed protein product [Homo sapiens]
gi|296470839|tpg|DAA12954.1| TPA: ribosomal protein S4, X-linked [Bos taurus]
gi|327239242|gb|AEA39488.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|327239334|gb|AEA39534.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
gi|387542680|gb|AFJ71967.1| 40S ribosomal protein S4, X isoform X isoform [Macaca mulatta]
Length = 263
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|431892606|gb|ELK03039.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 263
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIDKTEENFRLIYDTKGRFAVHRITSEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KG+P++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGVPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F +GKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVVGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|395862302|ref|XP_003803397.1| PREDICTED: 40S ribosomal protein S4, X isoform [Otolemur garnettii]
Length = 263
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|402868885|ref|XP_003898513.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIVVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I N+E+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNKERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|148695326|gb|EDL27273.1| mCG127176 [Mus musculus]
Length = 245
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA++KLCK
Sbjct: 48 MQRFIKIDVKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAQYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 108 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 168 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 227
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 228 LTIAEERDKRLAAKQSSG 245
>gi|53933236|ref|NP_001005589.1| 40S ribosomal protein S4, X isoform [Danio rerio]
gi|82180997|sp|Q642H9.3|RS4X_DANRE RecName: Full=40S ribosomal protein S4, X isoform
gi|51980251|gb|AAH81584.1| Ribosomal protein S4, X-linked [Danio rerio]
Length = 263
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDVVSI KT ENFRL+YD KGRF +H I +EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKF+ GN+ MVTG
Sbjct: 126 VRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++D++G+ FATRL N+F IGKG KPWVSLP+GKG++
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S++
Sbjct: 246 LTIAEERDKRLAAKQSSS 263
>gi|444729526|gb|ELW69939.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 248
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 51 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 110
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KI++FIKFD GN+ MVTG
Sbjct: 111 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKISDFIKFDTGNLCMVTG 170
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 171 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 230
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 231 LTIAEERDKRLAAKQSSG 248
>gi|402869907|ref|XP_003898985.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
Length = 263
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK++LCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYQLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392884050|gb|AFM90857.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR++ G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRNILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392882228|gb|AFM89946.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|348570508|ref|XP_003471039.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|318037367|ref|NP_001187069.1| 40S ribosomal protein S4 [Ictalurus punctatus]
gi|50401280|sp|Q90YS0.3|RS4_ICTPU RecName: Full=40S ribosomal protein S4
gi|15294019|gb|AAK95186.1|AF402812_1 40S ribosomal protein S4 [Ictalurus punctatus]
Length = 263
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YD KGRF +H I +EEAK+KLCK
Sbjct: 66 MQRFIKVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDP+IKANDT+++DLET KITEFIKFD GN+ MVTG
Sbjct: 126 VKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K WVS+P+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S++
Sbjct: 246 LTIAEERDKRLAAKQSSS 263
>gi|392873332|gb|AFM85498.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873708|gb|AFM85686.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392873792|gb|AFM85728.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874658|gb|AFM86161.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392874704|gb|AFM86184.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875138|gb|AFM86401.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875380|gb|AFM86522.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875746|gb|AFM86705.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392875962|gb|AFM86813.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876190|gb|AFM86927.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876292|gb|AFM86978.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876322|gb|AFM86993.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392876546|gb|AFM87105.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878526|gb|AFM88095.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878612|gb|AFM88138.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878672|gb|AFM88168.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878808|gb|AFM88236.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392878934|gb|AFM88299.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879118|gb|AFM88391.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879172|gb|AFM88418.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879522|gb|AFM88593.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392879718|gb|AFM88691.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880066|gb|AFM88865.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880068|gb|AFM88866.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880320|gb|AFM88992.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880570|gb|AFM89117.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392880610|gb|AFM89137.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392881410|gb|AFM89537.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882084|gb|AFM89874.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882130|gb|AFM89897.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882582|gb|AFM90123.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392882678|gb|AFM90171.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883756|gb|AFM90710.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883898|gb|AFM90781.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883956|gb|AFM90810.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392880372|gb|AFM89018.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|291383207|ref|XP_002708125.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRADITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392879752|gb|AFM88708.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392874478|gb|AFM86071.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVRIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392874404|gb|AFM86034.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDAVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|213409335|ref|XP_002175438.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|213409962|ref|XP_002175751.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003485|gb|EEB09145.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
gi|212003798|gb|EEB09458.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
Length = 262
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 159/193 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDATFPAGFMDVISIEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDT+KL+LE NKI F+KFD ++VMVTG
Sbjct: 126 VKRVQLGAKGVPFVVTHDGRTIRYPDPLIKVNDTVKLNLENNKIESFVKFDTSSMVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ +RE+H+GSFE +HI+DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 186 GRNMGRVGVVTHRERHEGSFEIVHIKDALDREFATRLSNVFVIGEAGKAWISLPKGKGVK 245
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 246 LSIAEERDRRRAL 258
>gi|126722859|ref|NP_001075891.1| 40S ribosomal protein S4 [Bos taurus]
gi|126010823|gb|AAI33508.1| Ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|296474500|tpg|DAA16615.1| TPA: ribosomal protein S4, Y-linked 1 [Bos taurus]
gi|440910374|gb|ELR60176.1| 40S ribosomal protein S4 [Bos grunniens mutus]
Length = 263
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI K ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392873726|gb|AFM85695.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|148229573|ref|NP_001090472.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|117949829|sp|P49401.4|RS4_XENLA RecName: Full=40S ribosomal protein S4
gi|77748204|gb|AAI06701.1| MGC132392 protein [Xenopus laevis]
Length = 263
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITSEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|327287930|ref|XP_003228681.1| PREDICTED: 40S ribosomal protein S4-like [Anolis carolinensis]
Length = 263
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|449269808|gb|EMC80554.1| 40S ribosomal protein S4, partial [Columba livia]
Length = 236
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 39 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 98
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 99 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTG 158
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 159 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 218
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 219 LTIAEERDKRLAAKQSSG 236
>gi|46048780|ref|NP_990439.1| 40S ribosomal protein S4 [Gallus gallus]
gi|1350995|sp|P47836.2|RS4_CHICK RecName: Full=40S ribosomal protein S4
gi|402296|gb|AAB59946.1| ribosomal protein S4 [Gallus gallus]
Length = 263
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|339521943|gb|AEJ84136.1| 40S ribosomal protein S4 X isoform [Capra hircus]
Length = 263
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARPIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+G+GI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGRGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR+A S+
Sbjct: 246 LTIAEERDKRRAAKQSSG 263
>gi|384492812|gb|EIE83303.1| 40S ribosomal protein S4 [Rhizopus delemar RA 99-880]
Length = 263
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 155/186 (83%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+SI KT ENFRL+YD KGRF +H I DEEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDSTFPAGFMDVISIEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+PYI T+DGRTIRYPDPLIK NDT++ ++ET KI +F+KFDVGN+VMVTG
Sbjct: 126 VKKVLIGSKGVPYITTHDGRTIRYPDPLIKTNDTVRFNIETGKIEDFVKFDVGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H G FE +HI+DAL H FATR+ NVFTIG+G K W+SLPKGKG+K
Sbjct: 186 GRNIGRVGQLVHRERHIGGFEIVHIKDALDHVFATRISNVFTIGQGNKSWISLPKGKGVK 245
Query: 181 LSIIEE 186
LSI EE
Sbjct: 246 LSITEE 251
>gi|227229|prf||1617101C ribosomal protein S4
Length = 263
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDRNGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|417398042|gb|JAA46054.1| Putative 40s ribosomal protein s4 [Desmodus rotundus]
Length = 263
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/192 (68%), Positives = 158/192 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI+++LET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQINLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|45360467|ref|NP_988912.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|82186868|sp|Q6PBC4.3|RS4_XENTR RecName: Full=40S ribosomal protein S4
gi|38181707|gb|AAH59771.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|50416656|gb|AAH77671.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
gi|89272957|emb|CAJ83152.1| ribosomal protein s4 x linked [Xenopus (Silurana) tropicalis]
Length = 263
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392883816|gb|AFM90740.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGIKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|350536323|ref|NP_001232240.1| putative ribosomal protein S4 [Taeniopygia guttata]
gi|197127213|gb|ACH43711.1| putative ribosomal protein S4 [Taeniopygia guttata]
Length = 263
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|147899358|ref|NP_001084941.1| 40S ribosomal protein S4 [Xenopus laevis]
gi|47122925|gb|AAH70591.1| MGC81176 protein [Xenopus laevis]
Length = 263
Score = 281 bits (720), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|355757464|gb|EHH60989.1| Single copy abundant mRNA protein, partial [Macaca fascicularis]
Length = 263
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T D RTIRYPDPLIK NDTI++DLET KI++FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTPDARTIRYPDPLIKVNDTIQIDLETGKISDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|349802859|gb|AEQ16902.1| putative 40s ribosomal protein s4 [Pipa carvalhoi]
Length = 235
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 130/196 (66%), Positives = 159/196 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 40 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 99
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 100 VRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTG 159
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+
Sbjct: 160 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIR 219
Query: 181 LSIIEEARKRQALATS 196
L+I EE KR A S
Sbjct: 220 LTIAEERDKRLAAKQS 235
>gi|126327259|ref|XP_001365342.1| PREDICTED: 40S ribosomal protein S4-like [Monodelphis domestica]
Length = 263
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLATHDARTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|328769177|gb|EGF79221.1| hypothetical protein BATDEDRAFT_35382 [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 130/196 (66%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YD KGRF +H I DEEAK+KLCKV
Sbjct: 97 QRLIKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDVKGRFTIHRITDEEAKYKLCKV 156
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V+ GQK IPYI T+DGRTIRYPDPL+K NDT+K+D+ T K TE+IKFD GN+ VTGG
Sbjct: 157 RQVKIGQKAIPYIVTHDGRTIRYPDPLVKVNDTVKVDIATGKFTEYIKFDSGNIAYVTGG 216
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR+G+I +REKH G FE +HI+DA+ H FATR+ NVF +G+G + W+SLPKGKG+KL
Sbjct: 217 RNMGRIGVITHREKHHGGFEIVHIKDAVDHTFATRISNVFVVGQGNQSWISLPKGKGVKL 276
Query: 182 SIIEE-ARKRQALATS 196
+I EE R+R+ L S
Sbjct: 277 TISEERDRRREKLLAS 292
>gi|387018384|gb|AFJ51310.1| 40S ribosomal protein S4-like [Crotalus adamanteus]
Length = 263
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D K+RTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKIRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392884008|gb|AFM90836.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 281 bits (719), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FI+FD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIEFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392878524|gb|AFM88094.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNREGHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392882682|gb|AFM90173.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+G+GI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGEGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LAIAEERDKRLAAKQSSG 263
>gi|392877236|gb|AFM87450.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 245
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 48 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 108 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 168 GANLGRIGVITNRERHPGSFDVVHVKDTNGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 227
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 228 LTIAEERDKRLAAKQSSG 245
>gi|392881226|gb|AFM89445.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP + T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPRLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|395528794|ref|XP_003766510.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Sarcophilus
harrisii]
gi|395528796|ref|XP_003766511.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Sarcophilus
harrisii]
Length = 263
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|351705604|gb|EHB08523.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 237
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D K+RTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 40 MQRFIKIDGKIRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAIHRITPEEAKYKLCK 99
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTG
Sbjct: 100 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTG 159
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 160 GANLGRIGVITNRERHPGSFDVVHVKDTNGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 219
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 220 LTIAEERDKRLAAKHSSG 237
>gi|392877122|gb|AFM87393.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+ RL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHLRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|348540605|ref|XP_003457778.1| PREDICTED: 40S ribosomal protein S4-like [Oreochromis niloticus]
Length = 263
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE++KIT+FIKFD GN+ MVTG
Sbjct: 126 VKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLESSKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S++
Sbjct: 246 LTIAEERDKRLAAKQSSS 263
>gi|351701775|gb|EHB04694.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 263
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDVVSI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVVSIEKTGEHFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL + KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|296484165|tpg|DAA26280.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 262
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 158/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK+KLCK
Sbjct: 65 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 125 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 185 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 244
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR S+
Sbjct: 245 LTIAEERDKRLVAKQSSG 262
>gi|432920855|ref|XP_004080004.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Oryzias
latipes]
Length = 245
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 157/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 48 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 108 VRKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 168 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 227
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 228 LTIAEERDKRLA 239
>gi|395519902|ref|XP_003764080.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Sarcophilus
harrisii]
Length = 263
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392878002|gb|AFM87833.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+ I KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVIGIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|432920853|ref|XP_004080003.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Oryzias
latipes]
Length = 263
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 157/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|149712494|ref|XP_001498885.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Equus
caballus]
Length = 263
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 158/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M+R V +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MRRFVKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GNV MVTG
Sbjct: 126 VRKTFVGPKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLETGKITDFIKFDAGNVCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE++ GSFE +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERYPGSFEVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE R A S+
Sbjct: 246 LTIAEERDVRLATKQSSG 263
>gi|392884390|gb|AFM91027.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITGFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+G+GI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGRGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392875924|gb|AFM86794.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD N+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTDNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|348572544|ref|XP_003472052.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
porcellus]
Length = 263
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL + KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|392883812|gb|AFM90738.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ VTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCTVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAIQSSG 263
>gi|326917220|ref|XP_003204899.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 263
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+ EE KR A S+
Sbjct: 246 LTNAEERDKRLAAKQSSG 263
>gi|90820002|gb|ABD98758.1| putative ribosomal protein S4e [Graphocephala atropunctata]
Length = 263
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 162/199 (81%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD K+RTD YPAGFMDVV+I KT E FRL+YD KGRF +H I +EEAK+KLCK
Sbjct: 66 MQRLIKVDGKIRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITEEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI+LD+ ++KIT++I+FD GN+ M+TG
Sbjct: 126 VKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIQLDIASSKITDYIRFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D GH FATRL NVF IGKGTKP+VSLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDTNGHTFATRLVNVFIIGKGTKPYVSLPKGKGVK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSI EE KR LA AA+
Sbjct: 246 LSIAEERDKR--LAAKAAS 262
>gi|74136531|ref|NP_001028160.1| 40S ribosomal protein S4, Y isoform 1 [Monodelphis domestica]
gi|50401328|sp|O62739.3|RS4Y1_MONDO RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|3169291|gb|AAC32106.1| ribosomal protein S4 Y isoform [Monodelphis domestica]
Length = 263
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + KGIP++ T+D RTIRYPDPLIK NDT++++LET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|395823987|ref|XP_003785255.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Otolemur garnettii]
gi|395823989|ref|XP_003785256.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Otolemur garnettii]
Length = 263
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 158/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G K IP++ T+D RTIRYPDPLIK NDTI++DLET KIT+F+KFD GN+ M TG
Sbjct: 126 VRKIFVGTKEIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFVKFDTGNLCMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|124300793|dbj|BAF45892.1| ribosomal protein S4 [Solea senegalensis]
Length = 263
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 156/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEYFRLIYDVKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DLET KITEFIKFD GN+ MVTG
Sbjct: 126 VKKLLVGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITEFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|392876638|gb|AFM87151.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K WVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKLWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|291395508|ref|XP_002714210.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 158/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG F +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGCFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FAT L N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATWLSNIFVIGKGNKPWISLPQGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|351721738|ref|NP_001235428.1| uncharacterized protein LOC100500000 [Glycine max]
gi|255628423|gb|ACU14556.1| unknown [Glycine max]
Length = 205
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/140 (93%), Positives = 137/140 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSF 140
GRNRGRVG+IKNREKHKG
Sbjct: 186 GRNRGRVGVIKNREKHKGKL 205
>gi|431838156|gb|ELK00088.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 264
Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 156/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT+FIKFD N+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITDFIKFDTSNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|392883806|gb|AFM90735.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 263
Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT+E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTDEHFRLIYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTI YPDP+IK DT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKILVGTKGIPHLVTHDARTIHYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|148680472|gb|EDL12419.1| mCG124430 [Mus musculus]
Length = 263
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 158/192 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+QR + +D KVRTD TYPAGFMDV+SI K ENFRL+YDTKGRF +H I EEA++KLCK
Sbjct: 66 VQRFIKIDGKVRTDITYPAGFMDVISIDKNRENFRLIYDTKGRFAVHRITLEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+DGRTIRYPDPLIK NDTI++DLET K+T+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDGRTIRYPDPLIKVNDTIQIDLETGKVTDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKG++
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDASGNSFATRLSNIFVIGKGNKPWISLPRGKGVR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|392875736|gb|AFM86700.1| 40S ribosomal protein S4 [Callorhinchus milii]
gi|392883616|gb|AFM90640.1| 40S ribosomal protein S4 [Callorhinchus milii]
Length = 264
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 130/199 (65%), Positives = 160/199 (80%), Gaps = 1/199 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK-FKLC 59
MQR + +D KVRTD TYPAGFMDV+SI KTNE+FRL+YDTKGRF +H I EEAK +KLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKQYKLC 125
Query: 60 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
KVR + G KGIP++ T+D RTIRYPDP+IK DT+++DLET KIT+FIKFD GN+ MVT
Sbjct: 126 KVRKILVGTKGIPHLVTHDARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVT 185
Query: 120 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGI 179
GG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI
Sbjct: 186 GGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGI 245
Query: 180 KLSIIEEARKRQALATSAA 198
+L+I EE KR A S+
Sbjct: 246 RLTIAEERDKRLAAKQSSG 264
>gi|443722694|gb|ELU11454.1| hypothetical protein CAPTEDRAFT_152725 [Capitella teleta]
Length = 259
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/191 (67%), Positives = 157/191 (82%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTDKTYPAGFMDV+SI +TNENFRL+YD KGRF +H I EEAK+KLC+V
Sbjct: 67 QRLIKVDNKVRTDKTYPAGFMDVISIERTNENFRLIYDVKGRFAVHRITPEEAKYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R+++ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KI ++IKFD GN+ M+TGG
Sbjct: 127 RALKTGPKGVPFLTTHDARTIRYPDPLIKPNDTVQVDLATGKIKDYIKFDSGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG+I +REKH GSF+ IH++D GH FATR+ NVF IGKG + WVSLPKGKG+KL
Sbjct: 187 RNLGRVGLITHREKHPGSFDIIHVKDTTGHIFATRMSNVFVIGKGNRAWVSLPKGKGVKL 246
Query: 182 SIIEEARKRQA 192
SI EE KR A
Sbjct: 247 SIAEERDKRLA 257
>gi|354832417|gb|AER42698.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 263
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 157/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTG
Sbjct: 126 VKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|159145754|gb|ABW90414.1| putative ribosomal protein S4 [Barentsia elongata]
Length = 259
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 153/189 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRTD YP+GFMDV+SI +TNENFRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 66 QRLVKVDGKVRTDICYPSGFMDVISIERTNENFRLVYDVKGRFAVHRISGEEAKYKLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V KG+PY+ T+D RTIRYPDPL+K NDT+++DL T KI +FIKFD GN+ ++TGG
Sbjct: 126 RKVSVAPKGVPYLTTHDARTIRYPDPLVKMNDTVQVDLSTGKIKDFIKFDSGNLCLITGG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG++ +REKH GSF+ +HI+DA+GH FATR NVF IGKG KPW+SLPKGKG+KL
Sbjct: 186 RNTGRVGVVTHREKHPGSFDIVHIKDAVGHNFATRASNVFIIGKGNKPWISLPKGKGVKL 245
Query: 182 SIIEEARKR 190
SI EE +R
Sbjct: 246 SIAEERDRR 254
>gi|440912198|gb|ELR61790.1| hypothetical protein M91_18687, partial [Bos grunniens mutus]
Length = 278
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 156/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 84 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 143
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 144 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 203
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG KPW+SL +GKGI+
Sbjct: 204 GANLGRIGVITNRERHLGSFDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLHRGKGIR 263
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 264 LTIAEERDKRLA 275
>gi|74136523|ref|NP_001028159.1| 40S ribosomal protein S4, X isoform [Monodelphis domestica]
gi|50401327|sp|O62738.3|RS4X_MONDO RecName: Full=40S ribosomal protein S4, X isoform
gi|3169289|gb|AAC32105.1| ribosomal protein S4 X isoform [Monodelphis domestica]
Length = 263
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G K IP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|109083806|ref|XP_001094914.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Macaca mulatta]
gi|297297972|ref|XP_002805099.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Macaca mulatta]
gi|297297974|ref|XP_002805100.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Macaca mulatta]
gi|297297976|ref|XP_002805101.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 4
[Macaca mulatta]
Length = 264
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/199 (65%), Positives = 160/199 (80%), Gaps = 1/199 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLC 59
MQR + +D KVRTD TYPAGF MD++SI KT ENFRL+YDTKGRF +H I EEAK+KLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 125
Query: 60 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
KVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVT
Sbjct: 126 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 185
Query: 120 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGI 179
GG N GR+G+I NRE+H GSF+ +H++DA G+ FAT+L N+F IGKG KPW+SLP+GKGI
Sbjct: 186 GGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGI 245
Query: 180 KLSIIEEARKRQALATSAA 198
+L+I EE KR A S+
Sbjct: 246 RLTIAEERDKRLAAKQSSG 264
>gi|195128197|ref|XP_002008552.1| GI11752 [Drosophila mojavensis]
gi|193920161|gb|EDW19028.1| GI11752 [Drosophila mojavensis]
Length = 261
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/195 (66%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ T KIT++IKFD GN+ M+TG
Sbjct: 126 VRKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGSVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSISEERDKRLAAKT 260
>gi|320582410|gb|EFW96627.1| 40S ribosomal protein S4 [Ogataea parapolymorpha DL-1]
Length = 262
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/195 (67%), Positives = 160/195 (82%), Gaps = 1/195 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDSTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRITAEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDP IK NDT+K+DLET KIT+F+KFD G +VMVTG
Sbjct: 126 VKKVQLGKKGIPYVVTHDGRTIRYPDPAIKVNDTVKIDLETGKITDFLKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I N+E+H+G F+ +HI+DAL + F TRL NVF IG + KP+VSLPKGKGI
Sbjct: 186 GRNLGRVGVITNKERHEGGFDLVHIKDALENTFVTRLSNVFVIGAEAGKPYVSLPKGKGI 245
Query: 180 KLSIIEEARKRQALA 194
KLSI EE +R+ALA
Sbjct: 246 KLSIAEERDRRRALA 260
>gi|195377379|ref|XP_002047468.1| GJ13462 [Drosophila virilis]
gi|194154626|gb|EDW69810.1| GJ13462 [Drosophila virilis]
Length = 261
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR Q G KG+P++ T+DGRTIRYPDPL+ ANDT+++D+ T KIT++IKFD GN+ M+TG
Sbjct: 126 VRKTQLGAKGVPFLVTHDGRTIRYPDPLVHANDTVQVDIATGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSISEERDKRLAAKT 260
>gi|395546360|ref|XP_003775056.1| PREDICTED: 40S ribosomal protein S4, X isoform [Sarcophilus
harrisii]
Length = 291
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 94 MQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEYFRLIYDTKGRFAVHRITAEEAKYKLCK 153
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLI+ NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 154 VRKTFVGTKGIPHLVTHDARTIRYPDPLIRVNDTIQIDLETGKITDFIKFDTGNLCMVTG 213
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G++ NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 214 GANLGRIGVVTNREKHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIR 273
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 274 LTIAEERDKRLA 285
>gi|281182957|ref|NP_001162261.1| 40S ribosomal protein S4, X isoform [Papio anubis]
gi|159487313|gb|ABW97203.1| ribosomal protein S4, X-linked (predicted) [Papio anubis]
Length = 198
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 157/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMDVMSIDKTGENFRLIYDTKGRFAVHCITPEEAKYKLCK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + KG+P++ T+D TIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 61 VRKIFVSTKGVPHLVTHDAHTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG KPW+SLP+GKGI+
Sbjct: 121 GANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVTGKGNKPWISLPRGKGIR 180
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 181 LTIAEERDKRLAAKQSSG 198
>gi|452823075|gb|EME30088.1| 40S ribosomal protein S4e [Galdieria sulphuraria]
Length = 262
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/189 (68%), Positives = 155/189 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTDKT+PAGFMDV+ + +TNE FRLLYD KGRFRLH I EE K+KLC+
Sbjct: 66 MQRLVKVDGKVRTDKTFPAGFMDVIELERTNETFRLLYDVKGRFRLHRITPEEGKYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G +GIPYI T+DGRTIRYPDP IK NDT+ LDLET K+T+F+KF+VGN+ M+TG
Sbjct: 126 VKRAQMGVRGIPYIATHDGRTIRYPDPAIKHNDTVVLDLETGKVTDFLKFEVGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I++REKH GS E IH++DA G EFAT+L NVF IGKG +P+VSLPKGKGI+
Sbjct: 186 GHNIGRVGLIQHREKHPGSTEIIHVRDARGQEFATQLNNVFVIGKGNQPFVSLPKGKGIR 245
Query: 181 LSIIEEARK 189
SI+EE K
Sbjct: 246 FSILEEQEK 254
>gi|291400837|ref|XP_002716797.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
cuniculus]
Length = 263
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+S+ KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISVDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ H++D G+ FAT L N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANMGRIGVITNRERHPGSFDVAHVKDVNGNSFATWLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|295792254|gb|ADG29131.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 262
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 156/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 65 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTG
Sbjct: 125 VKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 185 GANLGRIGVITNREXHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 244
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 245 LTIAEERDKRLA 256
>gi|19112469|ref|NP_595677.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006874|sp|Q9USW5.1|RS4B_SCHPO RecName: Full=40S ribosomal protein S4-B
gi|6018736|emb|CAB57920.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIQVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTG
Sbjct: 126 VKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 186 GRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVK 245
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 246 LSITEERDRRRAL 258
>gi|125979105|ref|XP_001353585.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|195161167|ref|XP_002021441.1| GL25330 [Drosophila persimilis]
gi|54642349|gb|EAL31098.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
gi|194118554|gb|EDW40597.1| GL25330 [Drosophila persimilis]
Length = 261
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 158/195 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGFMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ T KIT++IKFD GN+ M+TG
Sbjct: 126 VKKNQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGSKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSISEERDKRLAAKT 260
>gi|195022457|ref|XP_001985577.1| GH17143 [Drosophila grimshawi]
gi|193899059|gb|EDV97925.1| GH17143 [Drosophila grimshawi]
Length = 261
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR Q G KG+P++ T+DGRTIRYPDPL+ ANDT+++D+ + KIT++IKFD GN+ M+TG
Sbjct: 126 VRKTQLGAKGVPFLVTHDGRTIRYPDPLVHANDTVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSISEERDKRLAAKT 260
>gi|22758868|gb|AAN05593.1| ribosomal protein S4 [Argopecten irradians]
Length = 259
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 155/195 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H I+ EEAK+KLC+V
Sbjct: 65 QRLIKVDGKVRTAKDYPAGFMDVITIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCRV 124
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G KG+P + T+D RTIRYPDPL K NDTI +D+ T K+ EFIKFD GN+ M+TGG
Sbjct: 125 KRVTVGAKGVPMLTTHDARTIRYPDPLAKVNDTIMVDIATGKMKEFIKFDSGNLCMITGG 184
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I++RE+H GSF+ +HI+DALGH FATRL VF IGKG KPW+SLP+GKG+KL
Sbjct: 185 HNLGRVGVIQHRERHPGSFDIVHIKDALGHTFATRLSYVFVIGKGNKPWISLPRGKGVKL 244
Query: 182 SIIEEARKRQALATS 196
SI EE +R A +S
Sbjct: 245 SIAEERDRRMAAKSS 259
>gi|355704916|gb|EHH30841.1| Single copy abundant mRNA protein, partial [Macaca mulatta]
Length = 263
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 157/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H SF+ H +DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPASFDGGHGKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|296485647|tpg|DAA27762.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+ KT ENFRL+YDT GRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVIRTDKTGENFRLIYDTTGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|19113142|ref|NP_596350.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|6094182|sp|P87158.2|RS4A_SCHPO RecName: Full=40S ribosomal protein S4-A
gi|3150141|emb|CAA19128.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTG
Sbjct: 126 VKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 186 GRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVK 245
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 246 LSITEERDRRRAL 258
>gi|296470815|tpg|DAA12930.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I +EAK+KLCK
Sbjct: 66 MQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KI +FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVISNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|358422345|ref|XP_003585334.1| PREDICTED: 40S ribosomal protein S4-like [Bos taurus]
Length = 263
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I +EAK+KLCK
Sbjct: 66 MQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KI +FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVISNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|3724352|dbj|BAA33778.1| ribosomal protein S4 [Schizosaccharomyces pombe]
Length = 260
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 64 MQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 123
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTG
Sbjct: 124 VKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTG 183
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 184 GRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVK 243
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 244 LSITEERDRRRAL 256
>gi|19115086|ref|NP_594174.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
gi|26006873|sp|Q9P4W9.1|RS4C_SCHPO RecName: Full=40S ribosomal protein S4-C
gi|8247670|emb|CAB93014.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
Length = 262
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTG
Sbjct: 126 VKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 186 GRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVK 245
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 246 LSITEERDRRRAL 258
>gi|296192615|ref|XP_002744145.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Callithrix jacchus]
Length = 263
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 158/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV++I K ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVITINKMGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE++ GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERYPGSFDAVHVKDANGNSFATRLPNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I E KR A S+
Sbjct: 246 LTIAEGRDKRLAAKQSSG 263
>gi|260808562|ref|XP_002599076.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
gi|229284352|gb|EEN55088.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
Length = 264
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YP+GFMDV++I KT ENFRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDRCYPSGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ IKFD GNV MVTG
Sbjct: 126 VRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ NRE+H GSF+ +H++D GH FATRL N+F IG+G KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGLVTNRERHPGSFDIVHVKDTAGHTFATRLANIFIIGRGNKPWVSLPKGKGIH 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE +R A+ + A
Sbjct: 246 LSIAEERDRRLAMKAATA 263
>gi|440901836|gb|ELR52713.1| 40S ribosomal protein S4, partial [Bos grunniens mutus]
Length = 271
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 127/189 (67%), Positives = 153/189 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 83 MQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAKYKLCK 142
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 143 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 202
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG KPW+SLP+GKGI
Sbjct: 203 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGIC 262
Query: 181 LSIIEEARK 189
L+I EE K
Sbjct: 263 LTIAEERDK 271
>gi|380815402|gb|AFE79575.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLATKQSSG 263
>gi|194870273|ref|XP_001972620.1| GG15623 [Drosophila erecta]
gi|190654403|gb|EDV51646.1| GG15623 [Drosophila erecta]
Length = 261
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ + KIT++IKFD GN+ M+TG
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|410906839|ref|XP_003966899.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Takifugu
rubripes]
Length = 263
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 158/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DL+T KIT+FIKFD N+ MVTG
Sbjct: 126 VKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSNMCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A +++
Sbjct: 246 LTIAEERDKRLAAKQASS 263
>gi|440911356|gb|ELR61037.1| hypothetical protein M91_01196, partial [Bos grunniens mutus]
Length = 269
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR +D KV TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 75 MQRFTKIDGKVCTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAKYKLCK 134
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK N TI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 135 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTG 194
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI
Sbjct: 195 GASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIC 254
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 255 LTIAEEREKRLA 266
>gi|291239929|ref|XP_002739871.1| PREDICTED: ribosomal protein S4, X-linked-like [Saccoglossus
kowalevskii]
Length = 269
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV++I KT ENFRL++D KGRF H I +EEAK+KLCK
Sbjct: 74 MQRLIKIDGKVRTDITYPAGFMDVITIEKTGENFRLIFDVKGRFTTHRITNEEAKYKLCK 133
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V KG+PY+ T+D RTIRYPDPLIK NDT K+D+ T KIT+FIKFD GNV M+TG
Sbjct: 134 VKKVGIAPKGVPYLVTHDARTIRYPDPLIKVNDTTKVDISTGKITDFIKFDSGNVCMITG 193
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H GSF+ +H++D LGH FATRL NVF IGKG KPW+SL KGKGI+
Sbjct: 194 GRNLGRVGLITHRERHPGSFDIVHVKDNLGHTFATRLTNVFVIGKGNKPWISLAKGKGIR 253
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 254 LTIAEERDKRIA 265
>gi|195428307|ref|XP_002062215.1| GK17425 [Drosophila willistoni]
gi|194158300|gb|EDW73201.1| GK17425 [Drosophila willistoni]
Length = 261
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ T KIT++IKFD GN+ M+TG
Sbjct: 126 VKKNQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSISEERDKRLAAKT 260
>gi|387539852|gb|AFJ70553.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|380815398|gb|AFE79573.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV G
Sbjct: 126 VRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|344229651|gb|EGV61536.1| hypothetical protein CANTEDRAFT_124333 [Candida tenuis ATCC 10573]
gi|344232943|gb|EGV64816.1| ribosomal protein S4e [Candida tenuis ATCC 10573]
Length = 262
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+S+ TNENFRL+YDTKGRF +H I +EEA +KL K
Sbjct: 66 MQQHVKVDGKVRTDATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY T+DGRTIRYPDP IKANDT+K+DLET KIT+FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKRGIPYAVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG + KP+VSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHRERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|380815400|gb|AFE79574.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV G
Sbjct: 126 VRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLATKQSSG 263
>gi|195494033|ref|XP_002094667.1| RpS4 [Drosophila yakuba]
gi|194180768|gb|EDW94379.1| RpS4 [Drosophila yakuba]
Length = 261
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MD++++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ + KIT++IKFD GN+ M+TG
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|380815404|gb|AFE79576.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV G
Sbjct: 126 VRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLATKQSSG 263
>gi|344232944|gb|EGV64817.1| hypothetical protein CANTEDRAFT_113586 [Candida tenuis ATCC 10573]
Length = 827
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+S+ TNENFRL+YDTKGRF +H I +EEA +KL K
Sbjct: 66 MQQHVKVDGKVRTDATFPAGFMDVISLEATNENFRLIYDTKGRFAVHRITNEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY T+DGRTIRYPDP IKANDT+K+DLET KIT+FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKRGIPYAVTHDGRTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG + KP+VSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHRERHEGGFDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|354486732|ref|XP_003505532.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cricetulus
griseus]
gi|344254738|gb|EGW10842.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 262
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 156/197 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L+T KIT+ IKFD GN+ MVTG
Sbjct: 126 VRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDTGKITDAIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSA 197
L+I EE KR A S
Sbjct: 246 LTIAEERDKRLAAKQSG 262
>gi|255730477|ref|XP_002550163.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
gi|240132120|gb|EER31678.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
Length = 244
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL K
Sbjct: 48 MQQHVQVDGKVRTDSTYPAGFMDVITLEATNEHFRLIYDVKGKFAVHRISAEEASYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRT+RYPDPLIKANDT+K+DL T KI +FIKFD G +VMVTG
Sbjct: 108 VKKVQLGKKGVPYVVTHDGRTLRYPDPLIKANDTVKIDLATGKIDDFIKFDTGRLVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 168 GRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 227
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 228 KLSISEERDRRRA 240
>gi|24663668|ref|NP_729871.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|24663672|ref|NP_524053.2| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|195327307|ref|XP_002030362.1| GM25394 [Drosophila sechellia]
gi|195589999|ref|XP_002084736.1| GD14426 [Drosophila simulans]
gi|76803819|sp|P41042.2|RS4_DROME RecName: Full=40S ribosomal protein S4
gi|7294504|gb|AAF49846.1| ribosomal protein S4, isoform B [Drosophila melanogaster]
gi|7294505|gb|AAF49847.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
gi|40882499|gb|AAR96161.1| RE57333p [Drosophila melanogaster]
gi|194119305|gb|EDW41348.1| GM25394 [Drosophila sechellia]
gi|194196745|gb|EDX10321.1| GD14426 [Drosophila simulans]
gi|220959550|gb|ACL92318.1| RpS4-PA [synthetic construct]
Length = 261
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ + KIT++IKFD GN+ M+TG
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|345566169|gb|EGX49115.1| hypothetical protein AOL_s00079g69 [Arthrobotrys oligospora ATCC
24927]
Length = 258
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/194 (65%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+PAGFMDV++I KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIQVDGKVRTDATFPAGFMDVITIEKTGEHFRLIYDTKGRFTIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ GQKGIPY+ T+D RTIRYPDP IK NDT+++DLET KI +F+ FD G +VMVTG
Sbjct: 126 VRRVQLGQKGIPYLVTHDARTIRYPDPSIKVNDTVQVDLETGKINDFVPFDTGAIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F+ +HI+DA+ + FATRL NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFDIVHIKDAIDNSFATRLSNVFIIGT-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+A A
Sbjct: 245 LTIAEERDRRRAAA 258
>gi|302687328|ref|XP_003033344.1| 40S ribosomal protein S4 [Schizophyllum commune H4-8]
gi|300107038|gb|EFI98441.1| hypothetical protein SCHCODRAFT_76052 [Schizophyllum commune H4-8]
Length = 263
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 155/196 (79%), Gaps = 2/196 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD YP GFMDVVSI K+ E+FRLLYD KGRF +H I EEA +KLC+
Sbjct: 66 MQRLIKIDGKVRTDTNYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G +G+P+I T+DGRTIRYPDP IK NDT+KLDLET KIT+F+KFD GN+VM+TG
Sbjct: 126 VRKVAIGARGVPHIVTHDGRTIRYPDPAIKVNDTVKLDLETGKITDFVKFDTGNIVMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G+I +REKH G F+ +H++DAL FATRL N+F IG+GTKPW+SLPKGKG K
Sbjct: 186 GRNMGRSGVIVHREKHIGDFDIVHVRDALDRTFATRLSNIFVIGEGTKPWISLPKGKGTK 245
Query: 181 LSIIEE--ARKRQALA 194
L+I EE R++Q A
Sbjct: 246 LTIAEERDVRRKQRAA 261
>gi|354544187|emb|CCE40910.1| hypothetical protein CPAR2_109480 [Candida parapsilosis]
Length = 264
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVQVDGKVRTDATFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEATYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+KFD G +VMVTG
Sbjct: 126 VKRVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSITEERDRRRA 258
>gi|194750067|ref|XP_001957453.1| GF24027 [Drosophila ananassae]
gi|190624735|gb|EDV40259.1| GF24027 [Drosophila ananassae]
Length = 261
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI ANDT+++D+ + KIT++IKFD GN+ M+TG
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
L+I EE KR A T
Sbjct: 246 LTISEERDKRLAAKT 260
>gi|50403757|sp|P79183.3|RS4Y1_MACFU RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|6519826|dbj|BAA87933.1| ribosomal protein S4Y (RPS4Y) [Macaca fuscata]
Length = 263
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|157819705|ref|NP_001103082.1| ribosomal protein S4, Y-linked 2 [Rattus norvegicus]
gi|149048928|gb|EDM01382.1| rCG29848 [Rattus norvegicus]
Length = 262
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 156/197 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L++ KIT+ IKFD GN+ MVTG
Sbjct: 126 VRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGIITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSA 197
L+I EE KR A S
Sbjct: 246 LTIAEERDKRLAAKQSG 262
>gi|222831651|ref|NP_001138538.1| 40S ribosomal protein S4, Y isoform 2 [Macaca mulatta]
gi|219880801|gb|ACL51674.1| ribosomal protein S4 Y-linked 2 [Macaca mulatta]
Length = 263
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|45187482|ref|NP_983705.1| 40S ribosomal protein S4 [Ashbya gossypii ATCC 10895]
gi|44982220|gb|AAS51529.1| ADL391Cp [Ashbya gossypii ATCC 10895]
gi|374106917|gb|AEY95825.1| FADL391Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 157/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEATYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KIT+FIKFD G +V VTG
Sbjct: 126 VKRVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGKITDFIKFDTGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLP+GKGIK
Sbjct: 186 GRNLGRIGVITHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPRGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSIAEERDRRRA 257
>gi|449548320|gb|EMD39287.1| hypothetical protein CERSUDRAFT_112935 [Ceriporiopsis subvermispora
B]
Length = 263
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 155/196 (79%), Gaps = 2/196 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA +KLCK
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+PYI T+DGRTIRYPDPLIK NDTIK D+E KI +++KFD GN+VM+TG
Sbjct: 126 VKKVAIGTKGVPYIVTHDGRTIRYPDPLIKVNDTIKFDIEQGKIADYVKFDTGNIVMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G KPW+SLPKGKG+K
Sbjct: 186 GRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRITNIFVIGEGIKPWISLPKGKGVK 245
Query: 181 LSIIEE--ARKRQALA 194
L+I EE R+RQ A
Sbjct: 246 LTIAEERDVRRRQRAA 261
>gi|241948211|ref|XP_002416828.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|223640166|emb|CAX44413.1| 40s ribosomal protein S4 (S7), putative [Candida dubliniensis CD36]
Length = 262
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL K
Sbjct: 66 MQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|126139561|ref|XP_001386303.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126093585|gb|ABN68274.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+S+ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVKVDGKVRTDSTFPAGFMDVISLEATNEHFRLIYDVKGRFAVHRITAEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++G+PY+ T+DGRT+RYPDPLI+ANDT+K+DL T KIT+FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKRGVPYVVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|354548249|emb|CCE44986.1| hypothetical protein CPAR2_407890 [Candida parapsilosis]
Length = 264
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVQVDGKVRTDTTFPAGFMDVITLEATNENFRLIYDVKGRFAVHRISAEEATYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+KFD G +VMVTG
Sbjct: 126 VKRVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSITEERDRRRA 258
>gi|357615430|gb|EHJ69651.1| 40S ribosomal protein S4 [Danaus plexippus]
Length = 245
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 158/196 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 49 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 108
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ ++KI +FIKF+ GN+ M+TGG
Sbjct: 109 RHVGTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIASSKIMDFIKFESGNLCMITGG 168
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D++GH FATRL NVF IGKGTK ++SLP+GKGI+L
Sbjct: 169 RNLGRVGTIVSRERHPGSFDIVHIKDSMGHTFATRLNNVFIIGKGTKAYISLPRGKGIRL 228
Query: 182 SIIEEARKRQALATSA 197
+I EE KR A +A
Sbjct: 229 TIAEERDKRIAAKVAA 244
>gi|91083095|ref|XP_969262.1| PREDICTED: similar to ribosomal protein S4e [Tribolium castaneum]
gi|270006993|gb|EFA03441.1| hypothetical protein TcasGA2_TC013431 [Tribolium castaneum]
Length = 261
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/195 (66%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T DGRTIRYPDP+IK NDTI+L++ T+KI +FIKF+ GN+ M+TG
Sbjct: 126 VKKVQTGPKGIPFLVTRDGRTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ +HI+DA GH FATRL NVF IGKG+KP+VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSFDIVHIKDANGHTFATRLNNVFIIGKGSKPYVSLPRGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|344302425|gb|EGW32699.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 159/192 (82%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VDAKVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVKVDAKVRTDSTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++G+PY+ T+DGRTIRYPDPLIKANDT+K+DL T KI++FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKRGVPYVVTHDGRTIRYPDPLIKANDTVKIDLATGKISDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQ 191
KLSI EE +R+
Sbjct: 246 KLSISEERDRRR 257
>gi|209733632|gb|ACI67685.1| 40S ribosomal protein S4 [Salmo salar]
gi|209736494|gb|ACI69116.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 157/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTG
Sbjct: 126 VKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A ++
Sbjct: 246 LTIAEERDKRIAAKAGSS 263
>gi|198285663|gb|ACH85370.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 157/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 62 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 121
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTG
Sbjct: 122 VKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 181
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 182 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 241
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A ++
Sbjct: 242 LTIAEERDKRIAAKAGSS 259
>gi|225716876|gb|ACO14284.1| 40S ribosomal protein S4, X isoform [Esox lucius]
Length = 263
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 157/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTG
Sbjct: 126 VKKLLVGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGIITNRERHPGSFDVVHVKDSAGNLFATRLGNIFIIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A ++
Sbjct: 246 LTIAEERDKRIAAKAGSS 263
>gi|363755780|ref|XP_003648106.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892142|gb|AET41289.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
DBVPG#7215]
Length = 261
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYP GFMDV+S+ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPTGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEAAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+PY+ T+DGRTIRYPDP +K NDT+K+DL T KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGNKGVPYVVTHDGRTIRYPDPNVKVNDTVKVDLATGKITDFIKFDTGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLPKGKGIK
Sbjct: 186 GRNLGRIGVITHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSIAEERDRRRA 257
>gi|68475117|ref|XP_718444.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68475658|ref|XP_718177.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46439933|gb|EAK99245.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46440209|gb|EAK99518.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
Length = 244
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL K
Sbjct: 48 MQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FIKFD G +VMVTG
Sbjct: 108 VKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 168 GRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 227
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 228 KLSISEERDRRRA 240
>gi|74205095|dbj|BAE21004.1| unnamed protein product [Mus musculus]
gi|148678798|gb|EDL10745.1| RIKEN cDNA 1110033J19 [Mus musculus]
Length = 262
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDVAYPAGFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP++ T+D RTIRYPDPLIK NDT+++ L++ KIT+ IKFD GN+ MVTG
Sbjct: 126 VRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSA 197
L+I EE KR A S
Sbjct: 246 LTIAEERDKRLAAKQSG 262
>gi|389608137|dbj|BAM17680.1| ribosomal protein S4 [Papilio xuthus]
gi|389610695|dbj|BAM18959.1| ribosomal protein S4 [Papilio polytes]
Length = 263
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/199 (64%), Positives = 160/199 (80%), Gaps = 2/199 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R+V G K +PY+ T+DGRT+RYPDPLIK ND+I+LD+ T+KI +FIKF+ GN+ M+TGG
Sbjct: 127 RAVGTGPKSVPYLVTHDGRTVRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D+ GH FATR+ NVF IGKGTK ++SLP+GKG++L
Sbjct: 187 RNLGRVGTIVSRERHPGSFDIVHIRDSTGHTFATRMNNVFIIGKGTKAYISLPRGKGVRL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
+I EE KR +A AAQ
Sbjct: 247 TIAEERDKR--IAAKVAAQ 263
>gi|238879347|gb|EEQ42985.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 244
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL K
Sbjct: 48 MQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISGEEAAYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FIKFD G +VMVTG
Sbjct: 108 VKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 168 GRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 227
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 228 KLSISEERDRRRA 240
>gi|158187698|gb|ABW23138.1| ribosomal protein rps4 [Arenicola marina]
Length = 262
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 154/191 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTDKTYP GFMDV++I KT ENFRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 68 QRLIKVDGKVRTDKTYPCGFMDVITIEKTGENFRLIYDVKGRFAVHRISAEEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G KG+P++ T+DGRTIRYPDPL+K NDTI++D+ + KI EFIKFD GNV M+TGG
Sbjct: 128 KKGLVGLKGVPHLVTHDGRTIRYPDPLVKVNDTIQVDIASGKIKEFIKFDSGNVCMITGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D++GH FATRL NVF IGKG KPWVSLP G+G+KL
Sbjct: 188 RNLGRVGTITHRERHPGSFDVVHIKDSMGHTFATRLNNVFVIGKGLKPWVSLPGGRGLKL 247
Query: 182 SIIEEARKRQA 192
+I EE +R A
Sbjct: 248 TIAEERDRRIA 258
>gi|340521624|gb|EGR51858.1| hypothetical protein TRIREDRAFT_74568 [Trichoderma reesei QM6a]
Length = 259
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/194 (67%), Positives = 159/194 (81%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VDAKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDAKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD GNV MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGNVAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+ALA
Sbjct: 245 LTIAEERDRRRALA 258
>gi|254573092|ref|XP_002493655.1| 40S ribosomal protein S4 [Komagataella pastoris GS115]
gi|238033454|emb|CAY71476.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328354517|emb|CCA40914.1| 40S ribosomal protein S4 [Komagataella pastoris CBS 7435]
Length = 282
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/191 (67%), Positives = 156/191 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVQVDGKVRTDATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEATYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDP IK ND+IK+DL T KI +F+KFDVG +VMVTG
Sbjct: 126 VKKVQLGKKGIPYLVTHDGRTIRYPDPDIKVNDSIKIDLATGKILDFVKFDVGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +REKH+G F+ +HI+DAL ++F TRL NVF IG+ P +SLPKGKGIK
Sbjct: 186 GRNLGRVGVITHREKHEGGFDLVHIKDALENQFVTRLSNVFIIGEANAPIISLPKGKGIK 245
Query: 181 LSIIEEARKRQ 191
LSI EE +R+
Sbjct: 246 LSIAEERDQRR 256
>gi|68477663|ref|XP_717144.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|68477826|ref|XP_717065.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|241952448|ref|XP_002418946.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
gi|46438762|gb|EAK98088.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|46438844|gb|EAK98169.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
gi|223642285|emb|CAX44254.1| 40s ribosomal protein s4 (s7) [Candida dubliniensis CD36]
gi|238883906|gb|EEQ47544.1| 40S ribosomal protein S4 [Candida albicans WO-1]
Length = 262
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 129/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD TYPAGFMDV+++ TNE+FRL+YD KG+F +H I EEA +KL K
Sbjct: 66 MQQHVQVDGKVRTDTTYPAGFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|326512954|dbj|BAK03384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/196 (66%), Positives = 158/196 (80%), Gaps = 4/196 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GF DVV+I KT ENFRLL+DTKGRF + I EEAK+KLCK
Sbjct: 66 MQRLIKIDGKVRTDGTYPCGFQDVVTIDKTGENFRLLFDTKGRFVVQPISSEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G++GIP+I T+DGR IRYPDPLIKAND++KLDLE+ KIT+F+KFD+G VVMVTG
Sbjct: 126 VKRVTVGKEGIPFITTHDGRNIRYPDPLIKANDSVKLDLESGKITDFVKFDIGQVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG----TKPWVSLPKG 176
GRN GRVG+I +RE+H GSF+ +HI+DA+G+ FATRLGNVF IGK TK +SLPK
Sbjct: 186 GRNMGRVGVIVHRERHLGSFDIVHIKDAVGNTFATRLGNVFVIGKSDGKTTKALISLPKA 245
Query: 177 KGIKLSIIEEARKRQA 192
KGIK SI+EEA R A
Sbjct: 246 KGIKKSILEEAAARLA 261
>gi|380795755|gb|AFE69753.1| 40S ribosomal protein S4, Y isoform 1 Y isoform, partial [Macaca
mulatta]
Length = 244
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 47 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 106
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV G
Sbjct: 107 VRKITMGMKGIPHLETHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIG 166
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++
Sbjct: 167 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVR 226
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 227 LTIAEERDKRLATKQSSG 244
>gi|146418285|ref|XP_001485108.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146390581|gb|EDK38739.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 244
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 48 MQEHVKVDGKVRTDSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DLE+ KI++FIKFD G +VMVTG
Sbjct: 108 VKKVQLGKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 168 GRNLGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGI 227
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 228 KLSISEERDRRRA 240
>gi|196005203|ref|XP_002112468.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190584509|gb|EDV24578.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 154/189 (81%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYPAGFMDV++I KT ENFRLLYD KGRF +H I EEA +KLCKV
Sbjct: 67 QRLIKIDGKVRTDITYPAGFMDVIAIEKTGENFRLLYDAKGRFTVHRITPEEASYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ +Q G KGIPY T+D RTIRYPDPL+K NDTIK+DL++ KIT+F+KFD GN VM GG
Sbjct: 127 KQLQIGAKGIPYAVTHDARTIRYPDPLVKVNDTIKVDLKSGKITDFLKFDSGNQVMAIGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR+G+I +RE+H GSF+ +H++DA G+ FATRL NVF IGKGTKP+VSLP+GKGI+L
Sbjct: 187 RNMGRIGVITHRERHSGSFDIVHVKDAQGNAFATRLTNVFVIGKGTKPYVSLPRGKGIRL 246
Query: 182 SIIEEARKR 190
+I EE KR
Sbjct: 247 TIAEERDKR 255
>gi|112984078|ref|NP_001037257.1| 40S ribosomal protein S4 [Bombyx mori]
gi|74782218|sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4
gi|54609289|gb|AAV34860.1| ribosomal protein S4 [Bombyx mori]
Length = 263
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/199 (65%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T KI +FIKF+ GN+ M+TGG
Sbjct: 127 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK ++SLP+GKGI+L
Sbjct: 187 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
+I EE KR +A AAQ
Sbjct: 247 TIAEERDKR--IAAKVAAQ 263
>gi|307109802|gb|EFN58039.1| hypothetical protein CHLNCDRAFT_59606 [Chlorella variabilis]
Length = 261
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 153/189 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTDKTYP GFMDV+ IPKT+E+FRL+YD KGRF +H I EEA +KLCK
Sbjct: 66 MQRLVEVDGKVRTDKTYPVGFMDVIDIPKTDEHFRLVYDAKGRFVVHRITKEEASYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + FG+ GIP+I T+DGRT+RYPDP IK NDT+ LDLE+ K+ +FIKFDVGN+ M TG
Sbjct: 126 VKRLAFGKGGIPHIGTHDGRTVRYPDPEIKVNDTVMLDLESGKVKDFIKFDVGNLAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG I ++EKHKGSF+ +HI+DA GH FATR+ NVF IGKG KP +SLPKGKGI+
Sbjct: 186 GHNNGRVGTIVHKEKHKGSFDIVHIKDAAGHTFATRMTNVFVIGKGDKPMISLPKGKGIR 245
Query: 181 LSIIEEARK 189
SI++E K
Sbjct: 246 QSILQEQAK 254
>gi|388452714|ref|NP_001252674.1| ribosomal protein S4, Y-linked 1 [Macaca mulatta]
gi|387539378|gb|AFJ70316.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
Length = 263
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV G
Sbjct: 126 VRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLATKQSSG 263
>gi|289741733|gb|ADD19614.1| ribosomal protein S4 [Glossina morsitans morsitans]
Length = 243
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 153/192 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 48 MQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRISPEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR Q G KG+P+I T+DGRTIRYPDPLIKANDT+++D+ T KI +FIKFD GN+ M+TG
Sbjct: 108 VRKTQLGAKGVPFIVTHDGRTIRYPDPLIKANDTVQVDIATGKIIDFIKFDSGNLCMITG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGK T+ ++SLPK G+K
Sbjct: 168 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHIFATRLSNVFIIGKSTRSYISLPKDLGVK 227
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 228 LSIAEERDKRLA 239
>gi|198285597|gb|ACH85337.1| 40S ribosomal protein S4 [Salmo salar]
Length = 259
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 62 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 121
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G KG+P + T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTG
Sbjct: 122 VKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 181
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 182 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 241
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A ++
Sbjct: 242 LTIAEERDKRIAAKAGSS 259
>gi|410077092|ref|XP_003956128.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
gi|372462711|emb|CCF56993.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
Length = 261
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KI+E+IKFD G +V VTG
Sbjct: 126 VRKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLATGKISEYIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KPW+SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|296482862|tpg|DAA24977.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 263
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 158/198 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG F +H I EEAK+KL K
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGHFAVHRITPEEAKYKLYK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+F+KFD GN+ MVTG
Sbjct: 126 VRKIFMGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFMKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GR+G+I +RE+H GSF+ +H++DA G+ FATRL ++F IGKG KPW+SLP GKGI+
Sbjct: 186 GASLGRIGVITSRERHPGSFDVVHVKDANGNSFATRLSDIFVIGKGNKPWISLPHGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A+ S+
Sbjct: 246 LTIAEERDKRLAVKQSSG 263
>gi|315115407|gb|ADT80676.1| ribosomal protein S4 [Euphydryas aurinia]
Length = 263
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 157/196 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T+KI +FIKF+ GN+ M+TGG
Sbjct: 127 RHVGTGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK ++SLP+GKG++L
Sbjct: 187 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGVRL 246
Query: 182 SIIEEARKRQALATSA 197
+I EE KR A +A
Sbjct: 247 TIAEERDKRIAAKVAA 262
>gi|448524476|ref|XP_003871516.1| Rps4a predicted ribosomal protein [Candida orthopsilosis Co 90-125]
gi|380353338|emb|CCG26094.1| Rps4a predicted ribosomal protein [Candida orthopsilosis]
Length = 264
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVQVDGKVRTDTTFPAGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEATYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+KFD G +VMVTG
Sbjct: 126 VKKVQLGKKGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GR+G+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRIGVIVHREKHEGGFDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSITEERDRRRA 258
>gi|302846722|ref|XP_002954897.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300259872|gb|EFJ44096.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 261
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 159/196 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYP GFMDV+SI KT+E+FRL+ DTKGRF +H I EEA +KLC+
Sbjct: 66 MQRLVKVDGKVRTDHTYPTGFMDVISIEKTDEHFRLVLDTKGRFVVHRISKEEAAYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQFG+ G+PY+ T+DGRT+RYPDP +KAND++ LD+ET KI E++K DVG +VMVTG
Sbjct: 126 VRKVQFGKGGVPYVATHDGRTVRYPDPEVKANDSVMLDIETGKIKEYVKNDVGALVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG I ++EKHKGSFE +HI+DA G+ FATRL N+F IGK KP +SLPKGKGI+
Sbjct: 186 GHNAGRVGKIVHKEKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPKGKGIR 245
Query: 181 LSIIEEARKRQALATS 196
L+II+E +KR A++
Sbjct: 246 LTIIQEQKKRYEAASA 261
>gi|126273970|ref|XP_001387773.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
gi|126213643|gb|EAZ63750.1| ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
Length = 262
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 158/192 (82%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+S+ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVKVDGKVRTDSTFPAGFMDVISLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++G+PY+ T+DGRT+RYPDPLI+ANDT+K+DL T KIT+FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKRGVPYVVTHDGRTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHREKHEGGFDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQ 191
KLSI EE +R+
Sbjct: 246 KLSISEERDRRR 257
>gi|444705790|gb|ELW47180.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 263
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EE K+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEVKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGI ++ T+D RTIRY DPLIK NDTI+++L+T KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGISHLVTHDARTIRYSDPLIKVNDTIQINLKTGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPWGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|146413813|ref|XP_001482877.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
gi|146392576|gb|EDK40734.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
Length = 262
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQEHVKVDGKVRTDSTFPAGFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY+ T+DGRT+RYPDPLI+ANDT+K+DLE+ KI++FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKRGIPYVVTHDGRTLRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|57113929|ref|NP_001009024.1| 40S ribosomal protein S4, Y isoform 2 [Pan troglodytes]
gi|51316604|sp|Q6GVM7.3|RS4Y2_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|48728364|gb|AAT46348.1| RPS4Y2 [Pan troglodytes]
gi|410308434|gb|JAA32817.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353921|gb|JAA43564.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|76803657|gb|ABA55738.1| 40S ribosomal protein S4 [Mytilus edulis]
Length = 204
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 154/191 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD T+PAGFMDVV+I KT ENFRLLYD KGRF +H I+ EEAK+KLC+V
Sbjct: 12 QRLIKVDGKVRTDMTFPAGFMDVVTIDKTQENFRLLYDVKGRFAVHRIKSEEAKYKLCRV 71
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V KG+ Y+ T+DGRTIRYPDPL+K NDTI +D+ T KI +FIKFD GN+ M+TGG
Sbjct: 72 KKVGVALKGVCYVVTHDGRTIRYPDPLVKVNDTIMVDIATGKIKDFIKFDSGNLCMITGG 131
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I++RE+H GSF+ +HI+D+LGH FATRL VF IGKG KP+VSLP+GKG+KL
Sbjct: 132 HNLGRVGVIQHRERHPGSFDIVHIKDSLGHSFATRLSYVFIIGKGNKPYVSLPRGKGVKL 191
Query: 182 SIIEEARKRQA 192
SI EE +R A
Sbjct: 192 SIAEERDRRMA 202
>gi|223646190|gb|ACN09853.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672037|gb|ACN12200.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G KG+P + T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTG
Sbjct: 126 VKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L I EE KR A ++
Sbjct: 246 LPIAEERDKRIAAKAGSS 263
>gi|159466042|ref|XP_001691218.1| ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158279190|gb|EDP04951.1| ribosomal protein S4 [Chlamydomonas reinhardtii]
Length = 261
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 156/190 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYP GFMDV+S+ KT+ENFRL+ DTKGRF +H I EEA +KLC+
Sbjct: 66 MQRLVKVDGKVRTDHTYPTGFMDVISMEKTDENFRLVLDTKGRFVVHRISKEEAAYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V+FG+ G+PY+ T+DGRTIRYPDP IKAND+I LD+ET KI EF+K DVG +VMVTG
Sbjct: 126 VRKVEFGKGGVPYVITHDGRTIRYPDPEIKANDSIMLDIETGKIKEFVKNDVGALVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG I ++EKHKGSFE +HI+DA G+ FATRL N+F IGK KP +SLPKGKGI+
Sbjct: 186 GHNAGRVGKIVHKEKHKGSFEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPKGKGIR 245
Query: 181 LSIIEEARKR 190
L+II+E +KR
Sbjct: 246 LTIIQEQKKR 255
>gi|296484630|tpg|DAA26745.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 263
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR +D KV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFTKIDGKVCTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK N TI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG KPW+SLP+GKGI
Sbjct: 186 GASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGIC 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|157690730|tpe|CAL69092.1| TPA: putative 40S ribosomal protein S4 [Spadella cephaloptera]
Length = 260
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 154/191 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTD T+P GFMDVV + KT ENFRL+YD KGR+++H I EEA +KLC V
Sbjct: 67 QRLVKVDGRVRTDHTFPTGFMDVVQMEKTGENFRLIYDVKGRYKVHRISKEEALYKLCIV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G KGIPY+ T DGRTIRYPDPLIK+ND IK+D+ TNKIT++IKF+ GNV MVTGG
Sbjct: 127 KKVSVGPKGIPYLTTTDGRTIRYPDPLIKSNDCIKVDIATNKITDYIKFESGNVAMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII +R +H GSF+ +H++DA GH FATRL +FTIGKG+KPWVSLP+GKGI++
Sbjct: 187 RNLGRVGIIMHRGRHPGSFDIVHVKDAAGHSFATRLNYIFTIGKGSKPWVSLPEGKGIRM 246
Query: 182 SIIEEARKRQA 192
++ EE KR A
Sbjct: 247 TVAEERDKRIA 257
>gi|296470835|tpg|DAA12950.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 223
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I +EAK+KLCK
Sbjct: 26 MQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCK 85
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D R IRYPDPLIK NDTI+ DLET KIT+FIKFD GN+ VTG
Sbjct: 86 VRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQTDLETGKITDFIKFDTGNLCKVTG 145
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FAT L N+F IGKG KPW+SLP+GKGI+
Sbjct: 146 GANLGRIGVISNRERHPGSFDVVHVKDANGNSFATWLSNIFIIGKGNKPWISLPRGKGIR 205
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 206 LTIAEERDKRLAAKQSSG 223
>gi|448120177|ref|XP_004203912.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384780|emb|CCE78315.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD TYPAGFMDV++I TNENFRL+YD KGRF +H I EE +KL K
Sbjct: 66 MQEHVKVDGKVRTDSTYPAGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G++G+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +F+KFD G +VMVTG
Sbjct: 126 VKKVVLGKRGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNMGRVGVITHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|259089395|ref|NP_001158523.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
gi|225704068|gb|ACO07880.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
Length = 263
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTG
Sbjct: 126 VKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRIA 257
>gi|406604840|emb|CCH43715.1| 40S ribosomal protein S4 [Wickerhamomyces ciferrii]
Length = 243
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 157/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T+P+GFMDV+S+ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 48 MQRHVKVDGKVRTDATFPSGFMDVISLEATNENFRLVYDVKGRFAVHRISDEEASYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G++G+PY+ T+DGRTIRYPDP IK NDT+K+DLE+ KIT+FIKFD G +V VTG
Sbjct: 108 VKQVALGKRGVPYVVTHDGRTIRYPDPAIKINDTVKIDLESGKITDFIKFDTGKLVYVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 168 GRNLGRVGVITHRERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIK 227
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 228 LSISEERDRRRA 239
>gi|355693324|gb|EHH27927.1| hypothetical protein EGK_18242 [Macaca mulatta]
Length = 264
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 158/199 (79%), Gaps = 1/199 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGF-MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLC 59
MQR + +D KVRTD TYPAGF MD++SI KT ENFRL+YDTKGRF +H I EEAK+KLC
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 125
Query: 60 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
KVR + G KGIP++ T+D TI +PDPLIK NDTI++DLET KIT+FIKFD GN+ MVT
Sbjct: 126 KVRKIFVGTKGIPHLVTHDAHTIHHPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 185
Query: 120 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGI 179
GG N GR+G++ NRE+H GSF+ +H++DA G+ FAT+L N+F IGKG KPW+SLP+GKGI
Sbjct: 186 GGANLGRIGVLTNRERHPGSFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGI 245
Query: 180 KLSIIEEARKRQALATSAA 198
+L+I EE KR A S+
Sbjct: 246 RLTIAEERDKRLAAKQSSG 264
>gi|225680007|gb|EEH18291.1| 40S ribosomal protein S4-A [Paracoccidioides brasiliensis Pb03]
gi|226291789|gb|EEH47217.1| 40S ribosomal protein S4 [Paracoccidioides brasiliensis Pb18]
Length = 262
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 245 LSIAEERDRRRAVALAG 261
>gi|410080303|ref|XP_003957732.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
gi|372464318|emb|CCF58597.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
Length = 261
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KI+++IKFD G +V VTG
Sbjct: 126 VRKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLATGKISDYIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KPW+SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|225703238|gb|ACO07465.1| 40S ribosomal protein S4 [Oncorhynchus mykiss]
Length = 263
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G KG+P++ T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTG
Sbjct: 126 VKKNLIGTKGVPHLVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRIA 257
>gi|219880799|gb|ACL51673.1| ribosomal protein S4 Y-linked 1, partial [Macaca mulatta]
Length = 259
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 152/192 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV G
Sbjct: 126 VRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKG++
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|295667347|ref|XP_002794223.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286329|gb|EEH41895.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 262
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 245 LSIAEERDRRRAVALAG 261
>gi|156542863|ref|XP_001599933.1| PREDICTED: 40S ribosomal protein S4-like [Nasonia vitripennis]
Length = 262
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H I EAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KGIP++ T+DGRTIRYPDPLIK NDTI+L++ T KI + I+FD GN+ M+TG
Sbjct: 126 VRRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIQLEIATGKILDSIRFDTGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H+GSF+ HI+D+ GH FATRL NVF IGKGTKP+VSLP+G G+K
Sbjct: 186 GRNLGRVGTVVNRERHQGSFDICHIKDSQGHTFATRLHNVFIIGKGTKPYVSLPRGNGVK 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|440893161|gb|ELR46038.1| hypothetical protein M91_16118, partial [Bos grunniens mutus]
Length = 273
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 152/192 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR +D KV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK+KLCK
Sbjct: 79 MQRFTKIDGKVCTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCK 138
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK N TI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 139 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTG 198
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F GKG KPW+SLP+GKGI
Sbjct: 199 GASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGIC 258
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 259 LTIAEERDKRLA 270
>gi|440853|dbj|BAA03786.1| ribosomal protein S4 [Drosophila melanogaster]
Length = 261
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 156/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V V KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ + KIT++IKFD GN+ M+TG
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|358384887|gb|EHK22484.1| hypothetical protein TRIVIDRAFT_84016 [Trichoderma virens Gv29-8]
Length = 259
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/194 (67%), Positives = 158/194 (81%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VDAKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDAKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G V MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+ALA
Sbjct: 245 LTIAEERDRRRALA 258
>gi|242024748|ref|XP_002432788.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
gi|212518297|gb|EEB20050.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
Length = 245
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD K+RTD YPAGFMDV+SI K NE FRL+YD KGRF +H I +EA +KLCK
Sbjct: 48 MQRLIKVDGKIRTDPNYPAGFMDVISIEKINELFRLIYDVKGRFTIHRITPDEATYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTI+L++ T+KI +FIKF+ GN+ M+TG
Sbjct: 108 VKKVQTGPKGVPFLVTHDGRTIRYPDPLIKVNDTIQLEIATSKILDFIKFESGNLCMITG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D GH FATRL NVF IGKG+K +VSLP+GKG+K
Sbjct: 168 GRNLGRVGTVVNRERHPGSFDIVHIKDTQGHTFATRLNNVFIIGKGSKAYVSLPRGKGVK 227
Query: 181 LSIIEEARKRQALATSAAA 199
LS+ EE KR LA AA+
Sbjct: 228 LSVAEERDKR--LAAKAAS 244
>gi|227937267|gb|ACP43279.1| ribosomal protein S4 Y-linked 2 [Gorilla gorilla]
Length = 263
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAARQSSG 263
>gi|410268286|gb|JAA22109.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 246 LTVAAERDKRLATKQSSG 263
>gi|209736960|gb|ACI69349.1| 40S ribosomal protein S4 [Salmo salar]
Length = 263
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G KG+P + T+D RTIRYPDPLIK NDT+++DL T KITE KFD GN+ MVTG
Sbjct: 126 VKKNLMGTKGVPALVTHDARTIRYPDPLIKVNDTVRIDLATGKITEHTKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+GII NRE+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+
Sbjct: 186 GANLGRIGIITNRERHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A ++
Sbjct: 246 LTIAEERDKRIAAKAGSS 263
>gi|72533642|gb|AAI00906.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
Length = 263
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 246 LTVAEERDKRLAAKQSSG 263
>gi|170285559|emb|CAM34499.1| putative ribosomal protein S4 [Cotesia congregata]
Length = 262
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D+KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKIDSKVRTDINYPAGFMDVITIEKTGEYFRLIYDVKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KGIP+I T+DGRTIRYPDP+IK NDTI+L++ T+KI + I+F+ GN+ M+TG
Sbjct: 126 VRKVQTGPKGIPFIVTHDGRTIRYPDPVIKVNDTIQLEIATSKILDSIRFEPGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ HI+D+ GH FATRL NVF IGKG KP+VSLP+GKGIK
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGAKPYVSLPRGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 246 LSIAEERDKRLA 257
>gi|146285351|gb|ABQ18253.1| ribosomal protein S4e [Lygus lineolaris]
Length = 263
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/199 (64%), Positives = 157/199 (78%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGR+ +H I +EAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRYAIHRITADEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KGIP++ T+DGRTIRYPDPL K NDTI+LD+ TNKI + I+ D GN+ M+TG
Sbjct: 126 VRKVQTGPKGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATNKIIDIIRMDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG+K +VS+PKGKGIK
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHVKDATGHTFATRLNNVFIIGKGSKAYVSIPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
LSI EE +R LA AA+
Sbjct: 246 LSIAEERDRR--LAAKAAS 262
>gi|4506727|ref|NP_000999.1| 40S ribosomal protein S4, Y isoform 1 [Homo sapiens]
gi|133948|sp|P22090.2|RS4Y1_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|7959921|gb|AAF71131.1|AF116721_111 PRO2646 [Homo sapiens]
gi|337512|gb|AAA63256.1| ribosomal protein S4Y isoform [Homo sapiens]
gi|2791859|gb|AAB96967.1| ribosomal protein s4 Y isoform [Homo sapiens]
gi|16307477|gb|AAH10286.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
gi|119623176|gb|EAX02771.1| ribosomal protein S4, Y-linked 1, isoform CRA_b [Homo sapiens]
gi|123981388|gb|ABM82523.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|123996231|gb|ABM85717.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
gi|158259099|dbj|BAF85508.1| unnamed protein product [Homo sapiens]
gi|227937265|gb|ACP43278.1| ribosomal protein S4 Y-linked 1 [Gorilla gorilla]
Length = 263
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 246 LTVAEERDKRLATKQSSG 263
>gi|50550587|ref|XP_502766.1| 40S ribosomal protein S4 [Yarrowia lipolytica]
gi|6094184|sp|O59950.1|RS4_YARLI RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|2997729|gb|AAC08586.1| ribosomal protein S7 [Yarrowia lipolytica]
gi|49648634|emb|CAG80954.1| YALI0D12903p [Yarrowia lipolytica CLIB122]
Length = 260
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+ + KT ENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPAGFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEAAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDPLIK NDT+K+DL T KIT F+KF+ GN+VM TG
Sbjct: 126 VKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE+H+G F+ +HI+DAL ++F TRL NVF IG+G K +SLPKGKGIK
Sbjct: 186 GRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE R+A
Sbjct: 246 LSIAEERDARRA 257
>gi|133777261|gb|AAI00907.1| RPS4Y1 protein [Homo sapiens]
Length = 262
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 65 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 125 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 185 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 244
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 245 LTVAEERDKRLAAKQSSG 262
>gi|296470845|tpg|DAA12960.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
Length = 233
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+ I KT ENF L+YDTKGRF +H I +EAK+KLCK
Sbjct: 36 MQXFIKIDGKVRTDITYPAGFMDVIGIDKTGENFCLIYDTKGRFAVHRITPQEAKYKLCK 95
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KI +FIKFD GN+ MVTG
Sbjct: 96 VRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTG 155
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FAT L N+F IGKG KPW+SLP+GKGI+
Sbjct: 156 GANLGRIGVISNRERHLGSFDVVHVKDANGNSFATWLSNIFIIGKGNKPWISLPRGKGIR 215
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 216 LTIAEERDKRLAAKQSSG 233
>gi|407918333|gb|EKG11604.1| Ribosomal protein S4e [Macrophomina phaseolina MS6]
Length = 221
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA++KL K
Sbjct: 25 MQRLVKVDGKVRTDVTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITAEEAEYKLGK 84
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 85 VRRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGVIAMATG 144
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 145 GRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFATRESNVFIIGR-EKPWISLPKGKGVK 203
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 204 LSIAEERDRRRAYALAG 220
>gi|268306408|gb|ACY95325.1| ribosomal protein S4 [Manduca sexta]
Length = 263
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 157/199 (78%), Gaps = 2/199 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T KI +FIKF+ GN+ M+TGG
Sbjct: 127 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG + +RE+H GSF+ +H++DA GH FATRL NVF IGKGTK ++SLP+GKG++L
Sbjct: 187 RNLGRVGTLVSRERHPGSFDIVHVRDATGHTFATRLNNVFIIGKGTKAYISLPRGKGVRL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
+I EE KR +A A Q
Sbjct: 247 TIAEERDKR--IAAKVAGQ 263
>gi|50303511|ref|XP_451697.1| 40S ribosomal protein S4 [Kluyveromyces lactis NRRL Y-1140]
gi|49640829|emb|CAH02090.1| KLLA0B03652p [Kluyveromyces lactis]
Length = 261
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDP IK NDT+K+DL T IT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ +PW+SLPKGKGIK
Sbjct: 186 GRNLGRVGTIVHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTISEERDRRRA 257
>gi|70909487|emb|CAJ17168.1| ribosomal protein S4e [Mycetophagus quadripustulatus]
Length = 261
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 155/195 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T DGRTIRYPDP IK NDTI+L++ T+KI +FIKFD GN+ M+TG
Sbjct: 126 VKKVQTGPKGIPFLVTRDGRTIRYPDPNIKVNDTIQLEIATSKILDFIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GS + +H++DA GH FATRL NVF IGKG+KP+VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSVDIVHVKDANGHTFATRLNNVFIIGKGSKPYVSLPRGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|410308430|gb|JAA32815.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353917|gb|JAA43562.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
Length = 263
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 246 LTVAAERDKRLATKQSSG 263
>gi|342879232|gb|EGU80487.1| hypothetical protein FOXB_08947 [Fusarium oxysporum Fo5176]
Length = 261
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYP+GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G VVMVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A S
Sbjct: 245 LTIAEERDRRRAYAIS 260
>gi|38503307|sp|Q861U7.2|RS4Y1_PONPY RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF + I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKFD GNV MV G
Sbjct: 126 VRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLATKQSSG 263
>gi|242211537|ref|XP_002471606.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
gi|220729282|gb|EED83159.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
Length = 263
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 155/195 (79%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDV++I K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R + G KG+PYI T+DGRTIRYPDPLIK NDT+K DLE +KI +++KFD GN+VM+TGG
Sbjct: 127 RKMAIGTKGVPYIVTHDGRTIRYPDPLIKVNDTVKFDLEQSKILDYVKFDTGNLVMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +REKH G F+ +H++D+L FATR+ N+F +G+GTKPWVSLPKGKGIKL
Sbjct: 187 RNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGTKPWVSLPKGKGIKL 246
Query: 182 SIIEE--ARKRQALA 194
+I EE R+RQ A
Sbjct: 247 TITEERDVRRRQRAA 261
>gi|70909489|emb|CAJ17169.1| ribosomal protein S4e [Sphaerius sp. APV-2005]
Length = 262
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 130/198 (65%), Positives = 159/198 (80%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDVV+I KT+E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVVTIEKTSEFFRLIYDVKGRFTIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G +GIP++ T+DGRTIRYPDP+IK NDTI+L++ T+KI + IKF+ GN+ M+TG
Sbjct: 126 VRKVQTGPRGIPFLVTHDGRTIRYPDPVIKVNDTIQLEIATSKIMDSIKFESGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K +VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHIFATRLNNVFIIGKGSKAYVSLPRGKGVK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE KR LA AA
Sbjct: 246 LSIAEERDKR--LAAKAA 261
>gi|402223625|gb|EJU03689.1| 40S ribosomal protein S4 [Dacryopinax sp. DJM-731 SS1]
Length = 244
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 154/193 (79%), Gaps = 2/193 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+++ K+ E+FRLLYD KGRF +H I EEA +KL K
Sbjct: 48 MQRLIKVDGKVRTDTTYPAGFMDVITLEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KG+PYI T+DGRTIRYPDPLIK NDT+K DLET KI +F+KFD GNV ++TG
Sbjct: 108 VKKLAIGAKGVPYIVTHDGRTIRYPDPLIKVNDTVKFDLETGKIVDFVKFDTGNVAVITG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +REKH G F+ +H++D L +FATR+GN+F +G+G KPWVSLPKGKG+K
Sbjct: 168 GRNMGRVGTIVHREKHIGGFDIVHVKDVLDRDFATRIGNIFVVGEGVKPWVSLPKGKGVK 227
Query: 181 LSIIEE--ARKRQ 191
LSI EE R++Q
Sbjct: 228 LSIAEERDVRRKQ 240
>gi|28204689|gb|AAO37289.1| ribosomal protein S4 [Pongo pygmaeus]
Length = 262
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF + I EEAK+KLCK
Sbjct: 65 MQRFIKIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKFD GNV MV G
Sbjct: 125 VRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 185 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 244
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 245 LTIAEERDKRLATKQSSG 262
>gi|322701348|gb|EFY93098.1| ribosomal protein S4 [Metarhizium acridum CQMa 102]
Length = 261
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G V MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A S
Sbjct: 245 LTIAEERDRRRAYAQS 260
>gi|406606082|emb|CCH42555.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 261
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 157/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDATFPAGFMDVITLEATNENFRLVYDVKGRFAVHRISDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G++G+PY+ T+DGRTIRYPDP IK NDT+K+DLE+ KI++FIKFD G +V VTG
Sbjct: 126 VKQVALGKRGVPYVVTHDGRTIRYPDPAIKINDTVKIDLESGKISDFIKFDTGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRVGVITHRERHEGGFDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSISEERDRRRA 257
>gi|207344483|gb|EDZ71609.1| YHR203Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323308725|gb|EGA61964.1| Rps4bp [Saccharomyces cerevisiae FostersO]
gi|323333218|gb|EGA74617.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
gi|323336905|gb|EGA78163.1| Rps4ap [Saccharomyces cerevisiae Vin13]
gi|323337382|gb|EGA78635.1| Rps4bp [Saccharomyces cerevisiae Vin13]
gi|323347847|gb|EGA82109.1| Rps4ap [Saccharomyces cerevisiae Lalvin QA23]
gi|323348218|gb|EGA82468.1| Rps4bp [Saccharomyces cerevisiae Lalvin QA23]
gi|323354726|gb|EGA86561.1| Rps4bp [Saccharomyces cerevisiae VL3]
gi|365764787|gb|EHN06308.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765294|gb|EHN06806.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 196
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 181 LSIAEERDRRRA 192
>gi|121704880|ref|XP_001270703.1| 40S ribosomal protein S4 [Aspergillus clavatus NRRL 1]
gi|119398849|gb|EAW09277.1| 40S ribosomal protein S4, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDVV I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLIQVDGKVRTDPTYPAGFMDVVGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KITEF++FD G VVMVTG
Sbjct: 126 VKKVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITEFVRFDTGVVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 245 LSIAEERDRRRA 256
>gi|440894131|gb|ELR46663.1| hypothetical protein M91_05049, partial [Bos grunniens mutus]
Length = 258
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 154/197 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+ I KT ENFRL+ DTKGRF +H I +EAK+KLCK
Sbjct: 62 MQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLICDTKGRFAVHRITPQEAKYKLCK 121
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D R IRYPDPLIK NDTI++DLET KI +FIKFD GN+ MVTG
Sbjct: 122 VRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTG 181
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FAT+L N+F GKG KPW+SLP+GKGI+
Sbjct: 182 GANLGRIGVISNRERHLGSFDVVHVKDANGNSFATQLSNIFVTGKGNKPWISLPRGKGIR 241
Query: 181 LSIIEEARKRQALATSA 197
L+I EE KR A S+
Sbjct: 242 LTIAEERDKRLAAKQSS 258
>gi|38503308|sp|Q861U8.2|RS4Y1_GORGO RecName: Full=40S ribosomal protein S4, Y isoform 1
Length = 263
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 246 LTVAEERDKRLATKQSSG 263
>gi|448111276|ref|XP_004201802.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359464791|emb|CCE88496.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 154/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD TYPAGFMDV+SI TNE FRL+YD KGRF +H I EE +KL K
Sbjct: 66 MQEHVKVDGKVRTDSTYPAGFMDVISIDATNEYFRLIYDVKGRFAVHRITAEEGAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G++G+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +F+KFD G +VMVTG
Sbjct: 126 VKKVVLGKRGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNMGRVGVITHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|28204681|gb|AAO37288.1| ribosomal protein S4 [Gorilla gorilla]
Length = 262
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 65 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 125 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 185 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 244
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 245 LTVAEERDKRLATKQSSG 262
>gi|149244128|ref|XP_001526607.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449001|gb|EDK43257.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 246
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 158/197 (80%), Gaps = 4/197 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 48 MQQHVQVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEASYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+KFD G +VMVTG
Sbjct: 108 VKKVQLGKRGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GR+G I +REKH+G F+ +HI+DAL F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 168 GRNMGRIGTIVHREKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGI 227
Query: 180 KLSIIEE---ARKRQAL 193
KLSI EE AR+++ L
Sbjct: 228 KLSITEERDRARQQRGL 244
>gi|346469671|gb|AEO34680.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 152/192 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK+KLC+V
Sbjct: 67 QRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++IKFD GN+ MVTGG
Sbjct: 127 KRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNMCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVGII +RE+H GSF+ +H++DA GH FATRL +F IGK TKP++SLP+GKGIKL
Sbjct: 187 HNLGRVGIITSRERHPGSFDIVHVKDAQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKL 246
Query: 182 SIIEEARKRQAL 193
++ EE +R L
Sbjct: 247 TVAEERDRRLQL 258
>gi|62896747|dbj|BAD96314.1| ribosomal protein S4, Y-linked 1 Y isoform variant [Homo sapiens]
Length = 263
Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 246 LTVAEERDKRLATKQSSG 263
>gi|75029893|sp|Q4PMB3.1|RS4_IXOSC RecName: Full=40S ribosomal protein S4
gi|67083833|gb|AAY66851.1| ribosomal protein S4 [Ixodes scapularis]
Length = 262
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 151/189 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK+KLC+V
Sbjct: 67 QRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++IKFD GNV MVTGG
Sbjct: 127 KRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK TKP++SLP+GKGIKL
Sbjct: 187 HNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKL 246
Query: 182 SIIEEARKR 190
S+ EE +R
Sbjct: 247 SVAEERDRR 255
>gi|442755327|gb|JAA69823.1| Putative ribosomal protein s4 [Ixodes ricinus]
Length = 262
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 151/189 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK+KLC+V
Sbjct: 67 QRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++IKFD GNV MVTGG
Sbjct: 127 KRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK TKP++SLP+GKGIKL
Sbjct: 187 HNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKL 246
Query: 182 SIIEEARKR 190
S+ EE +R
Sbjct: 247 SVAEERDRR 255
>gi|403419501|emb|CCM06201.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VDAKVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA +KL K
Sbjct: 93 MQRLIKVDAKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLK 152
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KG+PYI T+DGRTIRYPDP IK NDT+K DLE KI +F+KFD GN+VM+TG
Sbjct: 153 VRKMAIGNKGVPYIVTHDGRTIRYPDPAIKVNDTVKFDLEQGKIVDFVKFDTGNIVMITG 212
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G+I +REKH G F+ +H++D+L FATR+ N+F +G+G KPW+SLPKGKG K
Sbjct: 213 GRNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVLGEGIKPWISLPKGKGTK 272
Query: 181 LSIIEE--ARKRQALA 194
L+I EE R+RQ A
Sbjct: 273 LTITEERDVRRRQRAA 288
>gi|448117738|ref|XP_004203329.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
gi|359384197|emb|CCE78901.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 154/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD TYP GFMDV++I TNENFRL+YD KGRF +H I EE +KL K
Sbjct: 66 MQEHVKVDGKVRTDSTYPTGFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +++KFD G +VMVTG
Sbjct: 126 VKKVVLGKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNMGRVGVIAHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|408392754|gb|EKJ72074.1| hypothetical protein FPSE_07699 [Fusarium pseudograminearum CS3096]
Length = 261
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 159/196 (81%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P+GFMDV++I KT ENFRL+YDTKGRF +H I++EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G VVMVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A S
Sbjct: 245 LTIAEERDRRRAYAIS 260
>gi|71000467|ref|XP_754922.1| 40S ribosomal protein S4 [Aspergillus fumigatus Af293]
gi|66852559|gb|EAL92884.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus Af293]
gi|159127935|gb|EDP53050.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F++FD G V MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVVCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVGII +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGIITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAYALA 260
>gi|410308428|gb|JAA32814.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
gi|410353915|gb|JAA43561.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 246 LTVAAERDKRLATKQSSG 263
>gi|46128673|ref|XP_388890.1| hypothetical protein FG08714.1 [Gibberella zeae PH-1]
Length = 243
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 159/196 (81%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P+GFMDV++I KT ENFRL+YDTKGRF +H I++EEA++KL K
Sbjct: 48 MQRLVKVDGKVRTDSTFPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAEYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G VVMVTG
Sbjct: 108 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 168 GRNMGRVGVITHRERHDGGFNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVK 226
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A S
Sbjct: 227 LTIAEERDRRRAYAIS 242
>gi|149239787|ref|XP_001525769.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449892|gb|EDK44148.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 264
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 158/197 (80%), Gaps = 4/197 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVQVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY+ T+DGRTIRYPDPLIK ND++K+DL T KIT+F+KFD G +VMVTG
Sbjct: 126 VKKVQLGKRGIPYVVTHDGRTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GR+G I +REKH+G F+ +HI+DAL F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNMGRIGTIVHREKHEGGFDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEE---ARKRQAL 193
KLSI EE AR+++ L
Sbjct: 246 KLSITEERDRARQQRGL 262
>gi|164429760|ref|XP_964251.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|157073608|gb|EAA35015.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
gi|336463316|gb|EGO51556.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2508]
gi|350297476|gb|EGZ78453.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2509]
Length = 261
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+DEEAK+KL K
Sbjct: 66 MQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQDEEAKYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++LET KI +F+KFD G + MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGAIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F IH++DAL + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRANALA 260
>gi|44967243|gb|AAS49567.1| ribosomal protein S4 [Latimeria chalumnae]
Length = 238
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/183 (67%), Positives = 149/183 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EE K+KLCK
Sbjct: 56 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEETKYKLCK 115
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT+FIKFD GN MV G
Sbjct: 116 VRKVFVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLNTGKITDFIKFDTGNQCMVIG 175
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 176 GANLGRVGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 235
Query: 181 LSI 183
L+I
Sbjct: 236 LTI 238
>gi|74844658|sp|Q95V34.1|RS4_SPOFR RecName: Full=40S ribosomal protein S4
gi|16566725|gb|AAL26580.1|AF429978_1 ribosomal protein S4 [Spodoptera frugiperda]
Length = 263
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTVHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G K +P++ T+DGRTIRYPDPLIK ND+++LD+ T+KI +FIKF+ GN+ M+TGG
Sbjct: 127 KRVSTGPKNVPFLVTHDGRTIRYPDPLIKVNDSVQLDIATSKIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK ++SLP+GKG++L
Sbjct: 187 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGVRL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
+I EE KR +A A Q
Sbjct: 247 TIAEERDKR--IAAKVAGQ 263
>gi|403302644|ref|XP_003941964.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
[Saimiri boliviensis boliviensis]
gi|403302646|ref|XP_003941965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
[Saimiri boliviensis boliviensis]
gi|403302648|ref|XP_003941966.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
[Saimiri boliviensis boliviensis]
Length = 263
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 152/198 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVR D TYPAGFMDV+SI K ENF L+YDTKGRF + I EEAK KLCK
Sbjct: 66 MQWFIKIDGKVRADITYPAGFMDVISIDKMGENFHLIYDTKGRFAVRRITPEEAKHKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLI+ NDTI+ DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIRVNDTIQTDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRTGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|365759818|gb|EHN01586.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365760266|gb|EHN01998.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401837629|gb|EJT41534.1| RPS4B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 196
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 181 LSIAEERDRRRA 192
>gi|6321997|ref|NP_012073.1| ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae S288c]
gi|398365603|ref|NP_012679.3| Rps4ap [Saccharomyces cerevisiae S288c]
gi|338819353|sp|P0CX35.1|RS4A_YEAST RecName: Full=40S ribosomal protein S4-A; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|338819354|sp|P0CX36.1|RS4B_YEAST RecName: Full=40S ribosomal protein S4-B; AltName: Full=RP5;
AltName: Full=S7; AltName: Full=YS6
gi|313103666|pdb|3IZB|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|364506100|pdb|3U5C|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506138|pdb|3U5G|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|172502|gb|AAA35011.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|172504|gb|AAA35012.1| ribosomal protein S7 [Saccharomyces cerevisiae]
gi|1015892|emb|CAA89678.1| RPS7B [Saccharomyces cerevisiae]
gi|2347176|gb|AAB68372.1| Rps7ap: Ribosomal protein S7 [Saccharomyces cerevisiae]
gi|151944148|gb|EDN62441.1| ribosomal protein S4B [Saccharomyces cerevisiae YJM789]
gi|151945211|gb|EDN63462.1| ribosomal protein S4A [Saccharomyces cerevisiae YJM789]
gi|190405978|gb|EDV09245.1| ribosomal protein S4B [Saccharomyces cerevisiae RM11-1a]
gi|190409613|gb|EDV12878.1| ribosomal protein S4A [Saccharomyces cerevisiae RM11-1a]
gi|259146964|emb|CAY80220.1| Rps4bp [Saccharomyces cerevisiae EC1118]
gi|259147610|emb|CAY80861.1| Rps4ap [Saccharomyces cerevisiae EC1118]
gi|285810109|tpg|DAA06896.1| TPA: ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae
S288c]
gi|285813032|tpg|DAA08930.1| TPA: Rps4ap [Saccharomyces cerevisiae S288c]
gi|349578755|dbj|GAA23920.1| K7_Rps4bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|349579328|dbj|GAA24491.1| K7_Rps4ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299017|gb|EIW10112.1| Rps4bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 261
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSIAEERDRRRA 257
>gi|255714348|ref|XP_002553456.1| 40S ribosomal protein S4 [Lachancea thermotolerans]
gi|238934836|emb|CAR23018.1| KLTH0D17248p [Lachancea thermotolerans CBS 6340]
Length = 261
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 157/192 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDTGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE+H+G F+ +HI+D+L + F TRL NVF IG+ ++P++SLPKGKGIK
Sbjct: 186 GRNLGRVGSIVHRERHEGGFDLVHIKDSLDNTFVTRLNNVFVIGEPSRPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|448097249|ref|XP_004198623.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
gi|359380045|emb|CCE82286.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
Length = 262
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 154/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ H+ VD KVRTD TYPAGFMDV+SI TNE FRL+YD KGRF +H I EE +KL K
Sbjct: 66 MQEHIKVDGKVRTDSTYPAGFMDVISIDSTNEYFRLIYDVKGRFAVHRITAEEGAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G++GIPY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI +++KFD G +VMVTG
Sbjct: 126 VKKVVLGKRGIPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNMGRVGVIAHREKHEGGFDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|400596580|gb|EJP64351.1| ribosomal family S4e [Beauveria bassiana ARSEF 2860]
Length = 259
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/194 (64%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+F+KFD G + MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGAIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+S+PKGKG+K
Sbjct: 186 GRNMGRIGVITHRERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISIPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+ALA
Sbjct: 245 LTIAEERDRRRALA 258
>gi|392589813|gb|EIW79143.1| 40S ribosomal protein S4 [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 150/192 (78%), Gaps = 2/192 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMD +SI K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKVDGKVRTDNTYPAGFMDTISIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G K +PYI T+DGRTIRYPDPLIK NDT+K DLE NKI EF KFD GN+VMVTGG
Sbjct: 127 RKVAVGAKSVPYIVTHDGRTIRYPDPLIKVNDTVKFDLEQNKILEFAKFDTGNLVMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +RE+H G F+ +H++D+L FATR+ N+F IG+G KPW+SLPKGKG+KL
Sbjct: 187 RNMGRAGVITHRERHIGDFDIVHVKDSLDRTFATRISNIFVIGEGNKPWISLPKGKGVKL 246
Query: 182 SIIEE--ARKRQ 191
+I EE R+RQ
Sbjct: 247 TISEERDMRRRQ 258
>gi|237862674|gb|ACR24962.1| ribosomal protein S4 [Lepidochitona cinerea]
Length = 253
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 151/185 (81%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +PAGFMDV++I KT ENFRL+YD KGRF +H I+ EEAK+KLCKV
Sbjct: 68 QRLIKVDGKVRTDMGFPAGFMDVITIEKTAENFRLIYDVKGRFTVHRIKPEEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R VQ G KG+P + T+DGRTIRYPDPL+K NDT+ LD+ T+KI +FIKFD GN+ M+TGG
Sbjct: 128 RRVQTGPKGVPMLYTHDGRTIRYPDPLVKVNDTVLLDIATSKIKDFIKFDSGNLCMITGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG I +RE+H GSF+ +H++D+LGH FATRL VF IGKG KPWVSLP+GKG++L
Sbjct: 188 HNLGRVGTITHRERHPGSFDIVHVKDSLGHSFATRLSYVFIIGKGNKPWVSLPRGKGVRL 247
Query: 182 SIIEE 186
SI E+
Sbjct: 248 SIAEK 252
>gi|320163608|gb|EFW40507.1| 40S ribosomal protein S4 [Capsaspora owczarzaki ATCC 30864]
Length = 263
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 158/197 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTD TYPAGFMDV+SI K+NE FRLLYD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLVKVDGRVRTDITYPAGFMDVISIEKSNEVFRLLYDVKGRFAVHRITAEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G KG+P + T+D RTIRYPDPLI AND+++++LET +I +F+KF+ GN+VM+T G
Sbjct: 127 RQVSTGAKGVPLLVTHDARTIRYPDPLIGANDSVQVELETGRIIDFVKFETGNLVMITAG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG+I +RE+H+G F+ +H++D+LGH FATR+GNVF IGKG K +VSLP+GKG++L
Sbjct: 187 RNIGRVGVIVSRERHEGGFDIVHVKDSLGHSFATRIGNVFVIGKGNKSYVSLPRGKGVRL 246
Query: 182 SIIEEARKRQALATSAA 198
SI EE +R A +A
Sbjct: 247 SIAEERDRRIAEKAKSA 263
>gi|156843178|ref|XP_001644658.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
gi|156115305|gb|EDO16800.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 196
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL T KIT++IKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPSIKVNDTVKIDLATGKITDYIKFDAGKLVYVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDTLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 181 LTIAEERDRRRA 192
>gi|57113861|ref|NP_001008987.1| 40S ribosomal protein S4, Y isoform 1 [Pan troglodytes]
gi|38503309|sp|Q861U9.2|RS4Y1_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|38503310|sp|Q861V0.2|RS4Y1_PANPA RecName: Full=40S ribosomal protein S4, Y isoform 1
gi|48728362|gb|AAT46347.1| RPS4Y [Pan troglodytes]
Length = 263
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 246 LTVAAERDKRLATKQSSG 263
>gi|367042184|ref|XP_003651472.1| 40S ribosomal protein S4 [Thielavia terrestris NRRL 8126]
gi|346998734|gb|AEO65136.1| hypothetical protein THITE_2111827 [Thielavia terrestris NRRL 8126]
Length = 262
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+DEEAK+KL K
Sbjct: 66 MQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAKYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET KIT+FIKFD G + MVTG
Sbjct: 126 VKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG KPW+SLPKG+G+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFGIVHLKDAIDNTFATRESNVFVIGS-EKPWISLPKGRGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAHALAG 261
>gi|302918408|ref|XP_003052651.1| 40S ribosomal protein S4 [Nectria haematococca mpVI 77-13-4]
gi|256733591|gb|EEU46938.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 261
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYP+GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPSGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G VVMVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAYAIA 260
>gi|28204665|gb|AAO37286.1| ribosomal protein S4 [Pan paniscus]
gi|28204673|gb|AAO37287.1| ribosomal protein S4 [Pan troglodytes]
Length = 262
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 65 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 125 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 185 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 244
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 245 LTVAAERDKRLATKQSSG 262
>gi|242812945|ref|XP_002486066.1| 40S ribosomal protein S4 [Talaromyces stipitatus ATCC 10500]
gi|218714405|gb|EED13828.1| 40S ribosomal protein S4, putative [Talaromyces stipitatus ATCC
10500]
Length = 263
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVQVDGKVRTDPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G + MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGVIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYALA 260
>gi|70909485|emb|CAJ17167.1| ribosomal protein S4e [Julodis onopordi]
Length = 261
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEYFRLIYDVKGRFTIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KG+P++ T+DGRTIRYPDP+IK NDTI+L++ T+K +FIKF+ N+ M+TG
Sbjct: 126 VRKVQTGPKGVPFLVTHDGRTIRYPDPIIKVNDTIQLEIATSKFLDFIKFESNNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+DA GH FATRL NVF IGKG+K +VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDANGHVFATRLNNVFIIGKGSKAFVSLPRGKGVK 245
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 246 LSIAEERDKRLA 257
>gi|156362157|ref|XP_001625647.1| predicted protein [Nematostella vectensis]
gi|156212490|gb|EDO33547.1| predicted protein [Nematostella vectensis]
Length = 263
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 153/191 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYPAGFMDVV+I KT ENFRLLYD KGRF +H I EEAK+KL +V
Sbjct: 67 QRLIKIDGKVRTDTTYPAGFMDVVTIDKTGENFRLLYDVKGRFAVHRITAEEAKYKLGRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G KG+PYI T+D RTIRYPDP IK NDT+ +D++T K+ ++IKFD GN+ MV GG
Sbjct: 127 RRVDVGAKGVPYIVTHDARTIRYPDPNIKVNDTVVIDIKTGKVIDYIKFDTGNMAMVVGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG++ +REKH GSF+ +H++DA GH+FATRL N+F IGKG KP+VSLPKGKG++L
Sbjct: 187 RNMGRVGMVTHREKHAGSFDIVHVKDATGHQFATRLTNIFVIGKGNKPYVSLPKGKGVRL 246
Query: 182 SIIEEARKRQA 192
SI EE +R A
Sbjct: 247 SIAEERDRRIA 257
>gi|296475761|tpg|DAA17876.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
Length = 260
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 153/198 (77%), Gaps = 3/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D R IRYPDPLIK ND I++DLET+KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARIIRYPDPLIKVNDIIQIDLETSKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW SLP GKGI
Sbjct: 186 GAN---XGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFIIGKGNKPWTSLPCGKGIC 242
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 243 LTIAEERDKRLAAKQSSG 260
>gi|358393591|gb|EHK42992.1| hypothetical protein TRIATDRAFT_300975 [Trichoderma atroviride IMI
206040]
Length = 259
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/194 (65%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDITYPAGYMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G V MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+ALA
Sbjct: 245 LTIAEERDRRRALA 258
>gi|336264577|ref|XP_003347065.1| 40S ribosomal protein S4 [Sordaria macrospora k-hell]
gi|380093082|emb|CCC09319.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 261
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H I+DEEAK+KL K
Sbjct: 66 MQRLIKVDGKVRTDITYPAGFMDVITIEKTGEHFRLIYDTKGRFTVHRIQDEEAKYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++LET KI +F+KFD G++ MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGSIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F IH++DAL + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRANAIA 260
>gi|28630198|gb|AAN77887.1| ribosomal protein S4 [Scyliorhinus canicula]
Length = 238
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/183 (66%), Positives = 152/183 (83%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP G MDV+SI KT+E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 56 MQRFIKIDGKVRTDITYPTGSMDVISIDKTSEHFRLIYDTKGRFAVHRITVEEAKYKLCK 115
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR ++ G KGIP++ T+D RTIRYPDPLIK NDT+++DL+T KIT+FIKFD GN+ MV G
Sbjct: 116 VRKIRVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLDTGKITDFIKFDTGNLCMVIG 175
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 176 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 235
Query: 181 LSI 183
L+I
Sbjct: 236 LTI 238
>gi|323308526|gb|EGA61771.1| Rps4ap [Saccharomyces cerevisiae FostersO]
gi|323354309|gb|EGA86152.1| Rps4ap [Saccharomyces cerevisiae VL3]
Length = 277
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 82 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 141
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 142 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 201
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 202 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 261
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 262 LSIAEERDRRRA 273
>gi|303289433|ref|XP_003064004.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454320|gb|EEH51626.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 151/191 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD K R DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H I E+++KLCK
Sbjct: 66 MQRLVKVDGKTRIDKCYPAGFMDVVSIDKTDEHFRLIYDQKGRFVVHRITQLESQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR+ + G KG+P +N +DGRTIRYPDP IK +DT+ +D+ +N IT KFD G + M+TG
Sbjct: 126 VRTKKLGDKGVPCVNLHDGRTIRYPDPEIKESDTVMVDISSNTITNHFKFDAGALAMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I+ REKHKGSFE IH+QDA GH+FATR NVF IG+G KP VSLPKGKGIK
Sbjct: 186 GRNAGRVGVIQRREKHKGSFEIIHVQDAAGHQFATRATNVFVIGEGNKPMVSLPKGKGIK 245
Query: 181 LSIIEEARKRQ 191
LSI+EE KR+
Sbjct: 246 LSIVEELEKRK 256
>gi|74829226|sp|Q56FH2.1|RS4_LYSTE RecName: Full=40S ribosomal protein S4
gi|62083411|gb|AAX62430.1| ribosomal protein S4 [Lysiphlebus testaceipes]
Length = 262
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YP GFMDVV+I KT E FRL+YD KGRF +H I +EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSNYPLGFMDVVTIEKTGEFFRLIYDVKGRFSIHRISNEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KG+P++ T+DGRT+RYPDP+IK NDTI+L++ TNKI + IKFD GN+ M+TG
Sbjct: 126 VRRVQTGPKGVPFLVTHDGRTLRYPDPVIKVNDTIQLEIATNKILDSIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+D+ GH FATR+ NVF IGKG+K +VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRMNNVFIIGKGSKAYVSLPRGKGVK 245
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 246 LSIAEERDKRLA 257
>gi|322705490|gb|EFY97075.1| ribosomal protein S4 [Metarhizium anisopliae ARSEF 23]
Length = 261
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDMTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G V MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A S
Sbjct: 245 LTIAEERDRRRAYTQS 260
>gi|390600199|gb|EIN09594.1| 40S ribosomal protein S4 [Punctularia strigosozonata HHB-11173 SS5]
Length = 263
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 151/198 (76%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYP GFMDVV+I K+ E+FRLLYD KGRF +H I EEA +KL K
Sbjct: 66 MQRLIKVDGKVRTDATYPTGFMDVVTIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KG+PYI T+DGRTIRYPDP IKANDT+K D E NKI +F+ F+ GN+VMVTG
Sbjct: 126 VRKVAVGSKGVPYIITHDGRTIRYPDPAIKANDTVKFDFEQNKIVDFVHFETGNIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G+I +REKH G F+ +H++D L FATR+ N+F IG+G KPWVSLP+GKG K
Sbjct: 186 GRNMGRAGVIVHREKHVGGFDIVHVKDTLDRTFATRISNIFVIGEGIKPWVSLPRGKGTK 245
Query: 181 LSIIEE--ARKRQALATS 196
LSI EE R+RQ A +
Sbjct: 246 LSIAEERDVRRRQRAAEA 263
>gi|61654708|gb|AAX48880.1| S4 [Suberites domuncula]
Length = 261
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 152/189 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VDAKVRTD T+PAGFMDVVSI KT ENFRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKVDAKVRTDPTFPAGFMDVVSIDKTGENFRLLYDIKGRFTVHRISPEEASYKLXKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R +Q G+KGIPY T+DGRTIRYPDP+I NDT+++DL T KIT+ IKFD+GN+VMVTGG
Sbjct: 127 RRIQLGKKGIPYCVTHDGRTIRYPDPVINVNDTVRIDLSTGKITDSIKFDIGNLVMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII NRE+H GSF+ IH++DA G FATR+ NVF IGKG K VS+P+ KGI+L
Sbjct: 187 RNLGRVGIITNRERHHGSFDIIHVKDAAGKSFATRMTNVFVIGKGNKAMVSIPRQKGIRL 246
Query: 182 SIIEEARKR 190
+I EE +R
Sbjct: 247 TIAEERDRR 255
>gi|391331686|ref|XP_003740274.1| PREDICTED: 40S ribosomal protein S4-like [Metaseiulus occidentalis]
Length = 262
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 152/192 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD T+P GFMDVVSI KT E FR+ YD KGRF LH I EEA++KLC+V
Sbjct: 67 QRLIKVDGKVRTDATFPTGFMDVVSIEKTGEFFRIHYDVKGRFILHRITAEEAEYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ + G K IP++ +DGRTIRYPDPLIKANDT+K+D+ T KI +FIKFD GNV MVTGG
Sbjct: 127 KKMSVGPKKIPFLVLHDGRTIRYPDPLIKANDTVKVDIATGKIDDFIKFDTGNVCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII +RE+H GSF+ +HI+D+ GH FATR +F IGKG+KPWVSLPKGKG+KL
Sbjct: 187 RNLGRVGIITSRERHPGSFDIVHIKDSSGHTFATRQSYIFVIGKGSKPWVSLPKGKGVKL 246
Query: 182 SIIEEARKRQAL 193
SI EE KR A+
Sbjct: 247 SIAEERDKRLAV 258
>gi|70909479|emb|CAJ17164.1| ribosomal protein S4e [Biphyllus lunatus]
Length = 261
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 154/195 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP++K NDTI++++ T+KI +FIKFD GN+ M+TG
Sbjct: 126 VKKVQTGPKGIPFLVTHDGRTIRYPDPMVKVNDTIQVEIATSKILDFIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GS + +HI+DA GH FATRL NVF IGKG K VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSSDIVHIKDANGHTFATRLNNVFIIGKGNKALVSLPRGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|383862866|ref|XP_003706904.1| PREDICTED: 40S ribosomal protein S4-like [Megachile rotundata]
Length = 262
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 151/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVITINKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ T I +FI+FD GN+ M+TG
Sbjct: 126 VKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIATGTILDFIRFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKGTKP++SLP+ KG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVK 245
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 246 LSIAEERDKRLA 257
>gi|367012660|ref|XP_003680830.1| 40S ribosomal protein S4 [Torulaspora delbrueckii]
gi|359748490|emb|CCE91619.1| hypothetical protein TDEL_0D00350 [Torulaspora delbrueckii]
Length = 261
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTFPAGFMDVISLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPYI T+DGRTIRYPDP IK ND++K+DL + KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKGIPYIVTHDGRTIRYPDPNIKINDSVKIDLASGKITDFIKFDTGKLVFVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIIHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSIAEERDRRRA 257
>gi|410308432|gb|JAA32816.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
gi|410353919|gb|JAA43563.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
Length = 263
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 246 LTVAAERDKRLATKQSSG 263
>gi|393233644|gb|EJD41214.1| hypothetical protein AURDEDRAFT_186691 [Auricularia delicata
TFB-10046 SS5]
Length = 361
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 154/200 (77%), Gaps = 2/200 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+QR V VD KVRTD TYP GFMDV+S+ +T E+FR+LYD KGRF +H I EEA +KL K
Sbjct: 162 LQRLVKVDGKVRTDDTYPTGFMDVISLERTGEHFRILYDVKGRFVIHRITAEEASYKLLK 221
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G +G+PYI T+DGRTIRYPDPLI+ NDT+K D+E NKI +F+KFD GN+V+VTG
Sbjct: 222 VRRVALGARGVPYIVTHDGRTIRYPDPLIRTNDTVKFDIEQNKIVDFVKFDTGNIVIVTG 281
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G+I +RE H G F+ +H++D+L FATR+ N+F IG+GTKPW+SLPKGKG K
Sbjct: 282 GRNMGRAGVITHREHHHGGFDIVHVRDSLDRTFATRISNIFVIGEGTKPWISLPKGKGTK 341
Query: 181 LSIIEE--ARKRQALATSAA 198
L+I EE R+RQ A A
Sbjct: 342 LTISEERDVRRRQKAAALEA 361
>gi|366998792|ref|XP_003684132.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|366999745|ref|XP_003684608.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
gi|357522428|emb|CCE61698.1| hypothetical protein TPHA_0B00260 [Tetrapisispora phaffii CBS 4417]
gi|357522905|emb|CCE62174.1| hypothetical protein TPHA_0C00170 [Tetrapisispora phaffii CBS 4417]
Length = 261
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKINDTVKIDLASGKITDFIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPFISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSISEERDRRRA 257
>gi|255077197|ref|XP_002502247.1| predicted protein [Micromonas sp. RCC299]
gi|226517512|gb|ACO63505.1| predicted protein [Micromonas sp. RCC299]
Length = 258
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 154/191 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD K R DK YPAGFMDVVSI KT+E+FRL+YD KGRF +H I EA++KLCK
Sbjct: 66 MQRLVKVDGKTRVDKCYPAGFMDVVSIDKTDEHFRLIYDAKGRFVVHRISSTEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V++ + G KG+P +N +DGRTIRYPDP+I +DT+ +D+ TNKIT+ IK+D G +VM+TG
Sbjct: 126 VKTKRLGDKGVPCVNLHDGRTIRYPDPVINESDTVMVDIATNKITDHIKYDAGALVMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+I+ REKHKGS E +H++DA GHEFATR N F IG+G KP +SLPKGKG++
Sbjct: 186 GRNRGRVGVIQRREKHKGSVEVVHVKDAGGHEFATRSSNTFVIGEGNKPMISLPKGKGLR 245
Query: 181 LSIIEEARKRQ 191
L+I+EE +R+
Sbjct: 246 LTIVEELERRK 256
>gi|115402491|ref|XP_001217322.1| 40S ribosomal protein S4 [Aspergillus terreus NIH2624]
gi|114189168|gb|EAU30868.1| 40S ribosomal protein S4-A [Aspergillus terreus NIH2624]
Length = 239
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 44 MQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 103
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+DL T KIT+F++FD G V MVTG
Sbjct: 104 VKRVQLGKGGIPFLVTHDARTIRYPDPAIRVNDTVKVDLATGKITDFVRFDTGVVCMVTG 163
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 164 GRNMGRVGVVTHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVK 222
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 223 LSIAEERDRRRAHAIA 238
>gi|67537248|ref|XP_662398.1| hypothetical protein AN4794.2 [Aspergillus nidulans FGSC A4]
gi|40741174|gb|EAA60364.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 239
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 44 MQRLIQVDGKVRTDPTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 103
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F +FD G V MVTG
Sbjct: 104 VKKVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTG 163
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 164 GRNMGRVGVVTHRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVK 222
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 223 LSIAEERDRRRAYALA 238
>gi|340720134|ref|XP_003398498.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
terrestris]
gi|340720136|ref|XP_003398499.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
terrestris]
gi|350408329|ref|XP_003488370.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
impatiens]
gi|350408333|ref|XP_003488371.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
impatiens]
Length = 262
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 151/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ T KI + I+FD GN+ M+TG
Sbjct: 126 VKRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIATGKILDSIRFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKGTKP++SLP+ KG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVK 245
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 246 LSIAEERDKRLA 257
>gi|119493023|ref|XP_001263767.1| 40S ribosomal protein S4 [Neosartorya fischeri NRRL 181]
gi|119411927|gb|EAW21870.1| 40S ribosomal protein S4, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F++FD G V MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVVCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAYALA 260
>gi|259482360|tpe|CBF76769.1| TPA: 40S ribosomal protein S4, putative (AFU_orthologue;
AFUA_3G06840) [Aspergillus nidulans FGSC A4]
Length = 261
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLIQVDGKVRTDPTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F +FD G V MVTG
Sbjct: 126 VKKVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVVTHRERHDGGFNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYALA 260
>gi|154273927|ref|XP_001537815.1| 40S ribosomal protein S4 [Ajellomyces capsulatus NAm1]
gi|150415423|gb|EDN10776.1| ribosomal protein S4 [Ajellomyces capsulatus NAm1]
Length = 262
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 245 LSIAEERDRRRAMALAG 261
>gi|212544592|ref|XP_002152450.1| 40S ribosomal protein S4 [Talaromyces marneffei ATCC 18224]
gi|210065419|gb|EEA19513.1| 40S ribosomal protein S4, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVQVDGKVRTDPTFPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RT+RYPDPLIK NDT+K+DL T KIT+F+KFD G + MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFVKFDTGVIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAVDNTFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAQAIA 260
>gi|444320813|ref|XP_004181063.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
gi|387514106|emb|CCH61544.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
Length = 261
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDITYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+K +PY+ T+DGRTIRYPDP IK NDT+K+DL T KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKSVPYVVTHDGRTIRYPDPNIKVNDTVKIDLATGKITDFIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSISEERDRRRA 257
>gi|321450822|gb|EFX62690.1| hypothetical protein DAPPUDRAFT_300650 [Daphnia pulex]
Length = 244
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 146/178 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSNYPAGFMDVITIDKTGEYFRLVYDVKGRFAIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+ TNKI +FIKFD GN+ M+TG
Sbjct: 126 VRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 178
GRN GRVG I NRE+H GSF+ +H++DALGH FATRL NVF IGKG+K ++SLP+ KG
Sbjct: 186 GRNLGRVGTIINRERHPGSFDIVHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKG 243
>gi|323304309|gb|EGA58083.1| Rps4ap [Saccharomyces cerevisiae FostersB]
Length = 196
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTXPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 181 LSIAEERDRRRA 192
>gi|336368345|gb|EGN96688.1| hypothetical protein SERLA73DRAFT_184826 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381154|gb|EGO22306.1| hypothetical protein SERLADRAFT_472969 [Serpula lacrymans var.
lacrymans S7.9]
Length = 263
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 151/195 (77%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYP GFMD +SI K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKVDGKVRTDATYPTGFMDTISIEKSGEHFRLLYDVKGRFTIHRITAEEASYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G KG+P++ T+DGRTIRYPDPLIK NDTIK DLE KI +F+KFD GN+VM+TGG
Sbjct: 127 RKVALGAKGVPHVVTHDGRTIRYPDPLIKVNDTIKFDLEQGKIIDFVKFDTGNIVMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+GTKPW+SLPKGKG KL
Sbjct: 187 RNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRISNIFVIGEGTKPWISLPKGKGTKL 246
Query: 182 SIIEE--ARKRQALA 194
+I EE R+RQ A
Sbjct: 247 TISEERDVRRRQRAA 261
>gi|342356395|gb|AEL28856.1| ribosomal protein S4 [Heliconius melpomene cythera]
Length = 263
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 156/196 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDV+SI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVISIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G K +PY+ T+DGRT+RYPDPLIK ND+++LD+ + +I +FIKF+ GN+ M+TGG
Sbjct: 127 RHVGTGPKNVPYLVTHDGRTLRYPDPLIKVNDSVQLDIASARIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +H++D+ GH FATRL NVF IGKGTK ++SLP+GKGI+L
Sbjct: 187 RNLGRVGTIVSRERHPGSFDIVHVRDSSGHTFATRLHNVFIIGKGTKAYISLPRGKGIRL 246
Query: 182 SIIEEARKRQALATSA 197
+I EE KR A +A
Sbjct: 247 TIAEERDKRIAAKQAA 262
>gi|367021618|ref|XP_003660094.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
gi|347007361|gb|AEO54849.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
42464]
Length = 262
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I++EEAK+KL K
Sbjct: 66 MQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQEEEAKYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET KIT+FIKFD G + M+TG
Sbjct: 126 VKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAIAMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPWVSLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFGIVHLKDAIDNTFTTRESNVFVIGT-DKPWVSLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAQALAG 261
>gi|260949501|ref|XP_002619047.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238846619|gb|EEQ36083.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 262
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I EE +KL K
Sbjct: 66 MQEHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGSYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G+K IPY+ T+DGRTIRYPDP I+ANDT+K+DL T KIT+FIKFD G +VMVTG
Sbjct: 126 VKKIALGKKAIPYVVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
G+N GRVG+I +REKH+G F+ +HI+DAL + F TR NVF +G + KPWVSLPKGKGI
Sbjct: 186 GKNLGRVGVIVHREKHEGGFDLVHIKDALDNTFVTRQSNVFVVGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSIAEERDRRRA 258
>gi|116193489|ref|XP_001222557.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
gi|88182375|gb|EAQ89843.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
Length = 262
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 157/198 (79%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+DEEAK+KL K
Sbjct: 66 MQRLVKVDGKVRTDVTYPAGFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAKYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET K T+FIKFD G + MVTG
Sbjct: 126 VKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKATDFIKFDTGAIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIG-SEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE R R+ AT A+
Sbjct: 245 LTIAEE-RDRKRAATLAS 261
>gi|189202048|ref|XP_001937360.1| 40S ribosomal protein S4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330932938|ref|XP_003303979.1| 40S ribosomal protein S4 [Pyrenophora teres f. teres 0-1]
gi|187984459|gb|EDU49947.1| 40S ribosomal protein S4-B [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311319705|gb|EFQ87929.1| hypothetical protein PTT_16383 [Pyrenophora teres f. teres 0-1]
Length = 262
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H I DEEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KI++FIKFD G +VMVTG
Sbjct: 126 VKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLTTGKISDFIKFDTGVIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYAIAG 261
>gi|327353918|gb|EGE82775.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis ATCC 18188]
Length = 302
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 106 MQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 165
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 166 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATG 225
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 226 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPKGKGVK 284
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 285 LSIAEERDRRRAMALAG 301
>gi|325184655|emb|CCA19147.1| 40S ribosomal protein S4 putative [Albugo laibachii Nc14]
Length = 261
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 152/191 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ V VD K+R D +PAGFMD+V IPK+ + FRLLYDTKGRF LH + EE K+KLCK
Sbjct: 66 MQKAVKVDGKIRVDPNFPAGFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V ++ +KGIPY+ T DGRTIRYPDPL+K+NDT+K+DLET KI +FIKF+ GN+VMVT
Sbjct: 126 VIRQEYTKKGIPYVATNDGRTIRYPDPLVKSNDTVKIDLETGKIVDFIKFETGNLVMVTR 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN G VG++ E+H+GSF I+D+ GHEFATRLGNVF IG G++PW+SLPKGKGIK
Sbjct: 186 GRNTGIVGMLHQIERHEGSFSIARIRDSTGHEFATRLGNVFAIGNGSRPWISLPKGKGIK 245
Query: 181 LSIIEEARKRQ 191
LSI+EE R+
Sbjct: 246 LSILEERSVRE 256
>gi|118573852|sp|Q4GXU6.1|RS4_CARGR RecName: Full=40S ribosomal protein S4
gi|70909481|emb|CAJ17165.1| ribosomal protein S4e [Carabus granulatus]
Length = 261
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 154/195 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YP+GFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPSGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI+L++ +KI + IKFD GN+ M+TG
Sbjct: 126 VKRVQTGPKGIPFLVTHDGRTIRYPDPIIKVNDTIQLEIANSKIMDSIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FA RL NVF IGKG+K +VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHTFANRLNNVFIIGKGSKAYVSLPRGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|451852241|gb|EMD65536.1| hypothetical protein COCSADRAFT_35575 [Cochliobolus sativus ND90Pr]
Length = 262
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 154/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P G MDV+SI KT ENFRL+YDTKGRF +H I DEEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KI++FIKFD G +VMVTG
Sbjct: 126 VKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYALAG 261
>gi|66517407|ref|XP_623050.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Apis mellifera]
gi|380027232|ref|XP_003697333.1| PREDICTED: 40S ribosomal protein S4-like [Apis florea]
Length = 262
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 151/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDANYPAGFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T KI + I+FD GN+ M+TG
Sbjct: 126 VKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+D+ GH FATRL NVF IGKGTKP++SLP+ KG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVK 245
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 246 LSIAEERDKRLA 257
>gi|451997437|gb|EMD89902.1| hypothetical protein COCHEDRAFT_1177980 [Cochliobolus
heterostrophus C5]
Length = 262
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 154/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P G MDV+SI KT ENFRL+YDTKGRF +H I DEEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPTGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KI++FIKFD G +VMVTG
Sbjct: 126 VKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EF TR NV IGK KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYALAG 261
>gi|406868524|gb|EKD21561.1| 40S ribosomal protein S4 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 262
Score = 265 bits (676), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 156/198 (78%), Gaps = 1/198 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIG-SEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE +R+A A +++
Sbjct: 245 LSIAEERDRRRAHAIASS 262
>gi|116871421|gb|ABK30794.1| ribosomal protein S4 [Branchiostoma belcheri]
Length = 264
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 152/198 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ IKFD GNV MVTG
Sbjct: 126 VRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ NRE+H GSF+ +H++D GH FATRL ++F IG+G KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGLVTNRERHPGSFDIVHVKDTAGHTFATRLADIFIIGRGNKPWVSLPKGKGIP 245
Query: 181 LSIIEEARKRQALATSAA 198
+E +R AL + A
Sbjct: 246 SVHRKERDRRLALKAATA 263
>gi|148691968|gb|EDL23915.1| mCG1288 [Mus musculus]
Length = 266
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/186 (65%), Positives = 149/186 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D K+RT YPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKIRTGFIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RT RYPDPLIK N TI++DLET K+T+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTTRYPDPLIKVNVTIQIDLETGKVTDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G FATRL N+F IGKG K W+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGKSFATRLSNIFVIGKGNKSWISLPRGKGIR 245
Query: 181 LSIIEE 186
L+I EE
Sbjct: 246 LTIAEE 251
>gi|44967294|gb|AAS49568.1| ribosomal protein S4 [Protopterus dolloi]
Length = 238
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/183 (65%), Positives = 151/183 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP+GFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 56 MQRFIKIDGKVRTDITYPSGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 115
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + KGIP++ T+D RTIRYPDPLIK NDT++++LE+ KIT+ IKFD GN+ MVTG
Sbjct: 116 VRKIFVRNKGIPHLVTHDARTIRYPDPLIKVNDTVQINLESGKITDMIKFDTGNLCMVTG 175
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 176 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 235
Query: 181 LSI 183
L+I
Sbjct: 236 LTI 238
>gi|409041189|gb|EKM50675.1| hypothetical protein PHACADRAFT_264068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 245
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGF DV+S+ K+ E+FRLLYD KGRF +H I EEA +KL K
Sbjct: 48 MQRLVKVDNKVRTDPTYPAGFQDVISLEKSGEHFRLLYDVKGRFTVHRITPEEATYKLLK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KG+PYI T+DGRTIRYPDPLIK NDT+K + ET KIT+F+KFD GN+VMVTG
Sbjct: 108 VKKIGIGAKGVPYIITHDGRTIRYPDPLIKVNDTVKFEFETGKITDFVKFDTGNIVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G+I +REKH G ++ +HI+D+L FATR+ NVF IG+G KPW+SLP+GKG K
Sbjct: 168 GRNMGRAGVIVHREKHIGGYDIVHIKDSLDRTFATRISNVFVIGEGIKPWISLPRGKGTK 227
Query: 181 LSIIEE--ARKRQALA 194
L+I EE R+RQ A
Sbjct: 228 LTITEERDVRRRQRAA 243
>gi|255944153|ref|XP_002562844.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587579|emb|CAP85619.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 65 MQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLIYDTKGRFTVHRIQAEEAEYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI +F+KFD G V+M TG
Sbjct: 125 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DAL ++FATR NVF IG+ KPWVSLPKGKG+K
Sbjct: 185 GRNMGRVGVITHRERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGKGVK 243
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 244 LSIAEERDRRRA 255
>gi|425780989|gb|EKV18971.1| 40S ribosomal protein S4, putative [Penicillium digitatum PHI26]
gi|425783252|gb|EKV21109.1| 40S ribosomal protein S4, putative [Penicillium digitatum Pd1]
Length = 260
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+S+ KT E+FRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 65 MQRLVKVDGKVRTDTTYPAGFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI +F+KFD G V+M TG
Sbjct: 125 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DAL ++FATR NVF IG+ KPWVSLPKGKG+K
Sbjct: 185 GRNMGRVGVITHRERHDGGFNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGKGVK 243
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 244 LSIAEERDRRRA 255
>gi|264667395|gb|ACY71283.1| ribosomal protein S4 [Chrysomela tremula]
Length = 261
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 154/195 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G K IP++ T+DGRT+RYPDP IK NDTI++++ T+KI ++IKF+ GN+ M+TG
Sbjct: 126 VRRVQTGPKNIPFLVTHDGRTLRYPDPNIKVNDTIQMEIATSKILDYIKFESGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG K +VSLP+GKGIK
Sbjct: 186 GRNLGRVGTVMNRERHPGSFDIVHVKDANGHVFATRLHNVFIIGKGAKAFVSLPRGKGIK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>gi|365986130|ref|XP_003669897.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343768666|emb|CCD24654.1| hypothetical protein NDAI_0D03400 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++IKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|392565330|gb|EIW58507.1| 40S ribosomal protein S4 [Trametes versicolor FP-101664 SS1]
Length = 262
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 153/193 (79%), Gaps = 2/193 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKVDGKVRTDSTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G KG+P++ T+DGRTIRYPDP IK NDT++ D+E +KIT+F+KFD GN+ +TGG
Sbjct: 127 RKVAIGNKGVPFVTTHDGRTIRYPDPAIKVNDTVRFDIEQSKITDFVKFDTGNLAFITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RNRGR G+I +REKH G F+ +H++D+L FATR+ N+F IG+GTK WVSLPKGKG+KL
Sbjct: 187 RNRGRAGVIVHREKHVGGFDIVHVKDSLERTFATRISNIFVIGEGTKSWVSLPKGKGLKL 246
Query: 182 SIIEE--ARKRQA 192
+I EE R+R+A
Sbjct: 247 TIAEERDVRRRRA 259
>gi|119192028|ref|XP_001246620.1| 40S ribosomal protein S4 [Coccidioides immitis RS]
gi|303313163|ref|XP_003066593.1| 40S ribosomal protein S4 [Coccidioides posadasii C735 delta SOWgp]
gi|240106255|gb|EER24448.1| 40S ribosomal protein S4, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320036517|gb|EFW18456.1| 40S ribosomal protein S4 [Coccidioides posadasii str. Silveira]
gi|392864147|gb|EAS35046.2| 40S ribosomal protein S4 [Coccidioides immitis RS]
Length = 262
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDATYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRISGEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVICMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG KPWVSLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHEGGFGIVHIKDAIDNTFATRESNVFVIGH-EKPWVSLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 245 LSIAEERDRRRAMALAG 261
>gi|261204631|ref|XP_002629529.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239587314|gb|EEQ69957.1| ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
gi|239614147|gb|EEQ91134.1| ribosomal protein S4 [Ajellomyces dermatitidis ER-3]
Length = 262
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 245 LSIAEERDRRRAMALAG 261
>gi|346325391|gb|EGX94988.1| ribosomal protein S4 [Cordyceps militaris CM01]
Length = 258
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 156/194 (80%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDMTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+F+KFD G + MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFVKFDTGAIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+S+PKGKG+K
Sbjct: 186 GRNMGRIGVITHRERHDGGFAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISVPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+ALA
Sbjct: 245 LTIAEERDRRRALA 258
>gi|384252070|gb|EIE25547.1| ribosomal protein S4 component of cytosolic 80S ribosome and 40S
small subunit [Coccomyxa subellipsoidea C-169]
Length = 260
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 152/192 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+ I KT+E+FRL+YD+KGRF H I EEA +KL K
Sbjct: 66 MQRLVRVDGKVRTDATYPAGFMDVIDIEKTDEHFRLIYDSKGRFVTHRITKEEAGYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V Q G+ G+PYI T+DGRTIRYPDP IK NDT+ D+ET KI +FIKFDVG +VMVTG
Sbjct: 126 VTRQQVGKGGVPYIATHDGRTIRYPDPDIKVNDTVMFDIETGKIKDFIKFDVGQLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I NR+KHKGSF+ I ++D++GH+FATRL NVF IGK KP +SLPKGKG++
Sbjct: 186 GRNVGRVGTIVNRQKHKGSFDIIVVKDSVGHQFATRLSNVFIIGKDEKPLISLPKGKGVR 245
Query: 181 LSIIEEARKRQA 192
L I++E KR A
Sbjct: 246 LDILQEQAKRDA 257
>gi|171685031|ref|XP_001907457.1| hypothetical protein [Podospora anserina S mat+]
gi|170942476|emb|CAP68128.1| unnamed protein product [Podospora anserina S mat+]
Length = 259
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 156/194 (80%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I DEE+K+KL K
Sbjct: 66 MQRLVKVDGKVRTDMTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRIGDEESKYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K++LET KI +FIKFD G + MVTG
Sbjct: 126 VKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKINLETGKIEDFIKFDTGAIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHLKDAIDNSFATRETNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +++AL
Sbjct: 245 LTIAEERDRKRALG 258
>gi|169595016|ref|XP_001790932.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
gi|111070616|gb|EAT91736.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
Length = 262
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H I DEEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T K+++FIKFD G +VMVTG
Sbjct: 126 VKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLSTGKVSDFIKFDTGVIVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ +EF TR NV IGK KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHLKDAVDNEFTTRETNVIVIGK-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYALAG 261
>gi|145245281|ref|XP_001394908.1| 40S ribosomal protein S4 [Aspergillus niger CBS 513.88]
gi|134079606|emb|CAK40823.1| unnamed protein product [Aspergillus niger]
gi|350631620|gb|EHA19991.1| hypothetical protein ASPNIDRAFT_199495 [Aspergillus niger ATCC
1015]
gi|358369177|dbj|GAA85792.1| 40S ribosomal protein S4 [Aspergillus kawachii IFO 4308]
Length = 258
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI +F+KFD G V M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKIADFVKFDTGVVAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVVTHRERHDGGFNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 245 LSIAEERDRRRAL 257
>gi|225559261|gb|EEH07544.1| 40S ribosomal protein S4 [Ajellomyces capsulatus G186AR]
gi|240282196|gb|EER45699.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H143]
gi|325088332|gb|EGC41642.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H88]
Length = 262
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYP GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPTGFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 245 LSIAEERDRRRAMALAG 261
>gi|217071784|gb|ACJ84252.1| unknown [Medicago truncatula]
Length = 196
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/141 (87%), Positives = 132/141 (93%)
Query: 59 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 118
+VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FIKFDVGNVVMV
Sbjct: 56 ARVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMV 115
Query: 119 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 178
TGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGN FTIGKGTKPWVSLPKGKG
Sbjct: 116 TGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNAFTIGKGTKPWVSLPKGKG 175
Query: 179 IKLSIIEEARKRQALATSAAA 199
IKL++IEEARKRQA AA
Sbjct: 176 IKLTVIEEARKRQAAQNVTAA 196
>gi|366987631|ref|XP_003673582.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
gi|342299445|emb|CCC67199.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++IKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|340975701|gb|EGS22816.1| 40S ribosomal protein S4-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 264
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 151/186 (81%), Gaps = 1/186 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I DEEAK+KL K
Sbjct: 66 MQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRITDEEAKYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DLET KIT+FIKFD G + M+TG
Sbjct: 126 VKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGALAMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DAL + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFGIVHLKDALDNTFATRESNVFVIGS-EKPWISLPKGKGVK 244
Query: 181 LSIIEE 186
L+I EE
Sbjct: 245 LTIAEE 250
>gi|395326662|gb|EJF59069.1| 40S ribosomal protein S4 [Dichomitus squalens LYAD-421 SS1]
Length = 261
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 154/195 (78%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDV++I K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G +G+PYI T+DGRTIRYPDP+IK NDT++ D++ KIT+F+KFD GN+V +TGG
Sbjct: 127 RKVAIGNRGVPYIVTHDGRTIRYPDPVIKVNDTVRFDIDQGKITDFVKFDTGNLVFITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RNRGR G+I +REKH G F+ +H++D+L FATR+ N+F IG+GTK WVSLPKGKGIKL
Sbjct: 187 RNRGRAGVITHREKHVGGFDIVHVKDSLDRTFATRISNIFVIGEGTKSWVSLPKGKGIKL 246
Query: 182 SIIEE--ARKRQALA 194
+I EE R++Q A
Sbjct: 247 TIAEERDVRRKQRAA 261
>gi|332017152|gb|EGI57951.1| 40S ribosomal protein S4 [Acromyrmex echinatior]
Length = 286
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 151/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD K+RTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK+KLCK
Sbjct: 90 MQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCK 149
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T+KI + I+FD GN+ M+TG
Sbjct: 150 VKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLCMITG 209
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+DA GH FATRL NVF IGKGTK +VSLP+ KG+K
Sbjct: 210 GRNLGRVGTVVSRERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVK 269
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 270 LSIAEERDKRLA 281
>gi|366997558|ref|XP_003678541.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
gi|342304413|emb|CCC72204.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPTGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEATYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++IKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|291407687|ref|XP_002720152.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 1
[Oryctolagus cuniculus]
Length = 255
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 153/198 (77%), Gaps = 8/198 (4%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK----- 120
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 121 ---IFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 177
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 178 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 237
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 238 LTIAEERDKRLAAKQSSG 255
>gi|50287861|ref|XP_446360.1| 40S ribosomal protein S4 [Candida glabrata CBS 138]
gi|49525667|emb|CAG59284.1| unnamed protein product [Candida glabrata]
Length = 261
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T DGRTIRYPDP IK NDT+K+DL + KIT++IKFD+G +V +TG
Sbjct: 126 VKKVQLGKKGVPYVVTDDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDIGKLVYITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +H++D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHVKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|94468404|gb|ABF18051.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 262
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ +D KVRTD YPAGFMDV++I KTNENFRL+YD KGRF +H I EEAK+KL K
Sbjct: 66 MQRHIKIDGKVRTDPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +KF+ GN+ M+TG
Sbjct: 126 VKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G + REKH GSFE +H++DA GH FATRL NVF IGK TK ++SLPKGKG+K
Sbjct: 186 GRNLGRCGTVIQREKHPGSFEIVHVKDATGHVFATRLTNVFIIGKATKAFISLPKGKGVK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE KR LA+ AA
Sbjct: 246 LSIAEERDKR--LASKAA 261
>gi|378728164|gb|EHY54623.1| 40S ribosomal protein S4 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 155/198 (78%), Gaps = 1/198 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EA++KL K
Sbjct: 66 MQRLIKVDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRIEQAEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIPY+ T+D RTIRYPDP IK NDT+K+DL T KIT+FI+FD G + MVTG
Sbjct: 126 VKRVQLGKGGIPYLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIRFDTGVIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IGK KPWVSLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFIIGK-EKPWVSLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE +R+A+ + A
Sbjct: 245 LSIAEERDRRRAVQLANA 262
>gi|167045794|gb|ABZ10463.1| ribosomal protein S4, X-linked X isoform (predicted) [Callithrix
jacchus]
Length = 263
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 152/198 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EE K+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEVKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T D TIRY DPLIK NDTI++DLET KIT+FI+FD GN+ MVT
Sbjct: 126 VQKIFVGTKGIPHLVTPDAHTIRYHDPLIKVNDTIQIDLETGKITDFIRFDTGNLCMVTR 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF +H++DA G+ FAT+L N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFNVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR S+
Sbjct: 246 LTIAEERDKRLVAKQSSG 263
>gi|299745325|ref|XP_001831641.2| 40S ribosomal protein S4 [Coprinopsis cinerea okayama7#130]
gi|298406535|gb|EAU90174.2| 40s ribosomal protein s4 [Coprinopsis cinerea okayama7#130]
Length = 263
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 155/195 (79%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKIDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G +G+P++ T+DGRTIRYPDPLIK NDT+K DLE NKIT+F+KFD GN+V+VTGG
Sbjct: 127 KRVALGARGVPHVVTHDGRTIRYPDPLIKVNDTVKFDLEQNKITDFVKFDTGNLVIVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G I ++EKH G F+ +HI+D+L FATR+ NVF IG+GTK W+SLPKGKG+KL
Sbjct: 187 RNMGRAGTIVHKEKHVGGFDIVHIKDSLDRTFATRVSNVFVIGEGTKAWISLPKGKGLKL 246
Query: 182 SIIEE--ARKRQALA 194
+I EE R+++A A
Sbjct: 247 TIAEERDVRRKRAAA 261
>gi|28630195|gb|AAN77886.1| ribosomal protein S4 [Myxine glutinosa]
Length = 238
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 119/183 (65%), Positives = 150/183 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV++I KT+ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 56 MQRLIKIDGKVRTDITYPAGFMDVITIDKTSENFRLIYDTKGRFAIHRITAEEAKYKLCK 115
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+R + KGIP++ T+D RTIRYPDPLIK NDT++++LE KIT+FIKF+ GN+ MVTG
Sbjct: 116 IRKRRVASKGIPFVVTHDARTIRYPDPLIKENDTVQVNLENGKITDFIKFETGNLCMVTG 175
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVGII +RE+H GSF+ +H++D G+ FATRLGN+F IGK K WVSLP+GKGI+
Sbjct: 176 GANLGRVGIITSRERHPGSFDVVHVKDTAGNTFATRLGNIFVIGKAQKAWVSLPRGKGIR 235
Query: 181 LSI 183
L+I
Sbjct: 236 LTI 238
>gi|452987335|gb|EME87091.1| hypothetical protein MYCFIDRAFT_162640 [Pseudocercospora fijiensis
CIRAD86]
Length = 262
Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I +EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITEEEAQYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K++LET KI +FI+FD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRETNVFVIGR-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYALA 260
>gi|322784955|gb|EFZ11726.1| hypothetical protein SINV_08231 [Solenopsis invicta]
Length = 261
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 151/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD K+RTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK+KLCK
Sbjct: 65 MQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T+KI + I+FD GN+ M+TG
Sbjct: 125 VKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLCMITG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+DA GH FATRL NVF IGKGTK +VSLP+ KG+K
Sbjct: 185 GRNLGRVGTVVSRERHPGSFDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVK 244
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 245 LSIAEERDKRLA 256
>gi|254584933|ref|XP_002498034.1| 40S ribosomal protein S4 [Zygosaccharomyces rouxii]
gi|238940928|emb|CAR29101.1| ZYRO0G00550p [Zygosaccharomyces rouxii]
Length = 261
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDSTFPAGFMDVISLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIR+PDP +K NDT+K+DL + KI ++IKFD G +V VTG
Sbjct: 126 VKKVQLGKKGIPYVVTHDGRTIRFPDPNVKVNDTVKIDLASGKIQDYIKFDTGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSITEERDRRRA 257
>gi|1350992|sp|P47837.1|RS4_CANAL RecName: Full=40S ribosomal protein S4; AltName: Full=S7
gi|1051260|gb|AAC49871.1| ribosomal protein S7 [Candida albicans]
Length = 262
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV V KVRTD TYPAGFMDV+++ TNE+FRL YD KG+F +H I EEA +KL K
Sbjct: 66 MQQHVQVVGKVRTDTTYPAGFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEAVYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REK +G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R A
Sbjct: 246 KLSISEERDRRXA 258
>gi|310791164|gb|EFQ26693.1| ribosomal family S4e [Glomerella graminicola M1.001]
Length = 262
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+T KI +FIKFD G++ MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRANALAG 261
>gi|193610901|ref|XP_001949785.1| PREDICTED: 40S ribosomal protein S4-like [Acyrthosiphon pisum]
Length = 265
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 156/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV+SI KT+E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVISIQKTSEHFRLIYDVKGRFTIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDP IK NDTI+ D+ T+KI + I+F+ GN+ M+TG
Sbjct: 126 VKKVQTGPKGVPFLTTHDGRTIRYPDPNIKVNDTIRYDIATSKILDHIRFETGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVGI+ NRE+H GSF+ +HI+DA H FATR+ NVF IGKG K ++SLP+ KG+K
Sbjct: 186 GRNLGRVGIVINRERHPGSFDIVHIKDANEHIFATRMNNVFIIGKGQKNYISLPRSKGVK 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A T ++
Sbjct: 246 LTISEERDKRLAAKTKSS 263
>gi|238589837|ref|XP_002392136.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
gi|215457775|gb|EEB93066.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
Length = 264
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 154/198 (77%), Gaps = 3/198 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD+TYP GFMDVVSI K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKIDGKVRTDETYPTGFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G +G+P+I T+DGRTIRYPDP I NDT+K D++ NKI +F+KFD GN+VMVTGG
Sbjct: 127 KKVALGARGVPHIVTHDGRTIRYPDPSINVNDTVKFDIQQNKIVDFVKFDTGNIVMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +R+KH G F+ +H++D+L FATRL N+F IG+GTKPW+SLPKGKG KL
Sbjct: 187 RNMGRAGVIVHRKKHIGDFDIVHVKDSLDRTFATRLSNIFVIGEGTKPWISLPKGKGTKL 246
Query: 182 SIIEE---ARKRQALATS 196
+I EE RKR A A++
Sbjct: 247 TIAEERDVRRKRAAEAST 264
>gi|149287204|gb|ABR23501.1| ribosomal protein S4 [Ornithodoros parkeri]
Length = 262
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 150/189 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD YPAGFMDV++I KT E FRLLYD KGRF LH I EEAK+KLC+V
Sbjct: 67 QRLIKVDHKVRTDTNYPAGFMDVITIEKTGEFFRLLYDVKGRFVLHRITPEEAKYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+D T KI ++IKFD GNV MVTGG
Sbjct: 127 KRVQVGPKGVPFLVTHDARTIRYPDPLIKVNDTVKVDQATGKIDDYIKFDSGNVCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG I +RE+H GSF+ +H++D+ GH FATRL +F IGKGTKP++SLP+GKG+KL
Sbjct: 187 HNLGRVGTIMSRERHPGSFDIVHVKDSQGHTFATRLSYIFIIGKGTKPYISLPRGKGVKL 246
Query: 182 SIIEEARKR 190
S+ EE +R
Sbjct: 247 SVAEERDRR 255
>gi|346977567|gb|EGY21019.1| 40S ribosomal protein S4-A [Verticillium dahliae VdLs.17]
Length = 262
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YD KGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+DL T KIT+FIKFD G + MVTG
Sbjct: 126 VKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F IH++DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIIHVKDAIDNTFATRESNVFVIGS-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAHAIAG 261
>gi|307213994|gb|EFN89201.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 198
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 149/192 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGRF H I EEAK+KLCK
Sbjct: 2 MQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCK 61
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ T KI + I+FD GN+ M+T
Sbjct: 62 VKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNLCMITS 121
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ H++DA GH FATRL NVF IGKGTK +VSLP+ KG+K
Sbjct: 122 GRNLGRVGTVVNRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVK 181
Query: 181 LSIIEEARKRQA 192
LSI EE +R A
Sbjct: 182 LSIAEERDRRLA 193
>gi|156035911|ref|XP_001586067.1| 40S ribosomal protein S4 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154698564|gb|EDN98302.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 262
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 154/196 (78%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAEYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAHAIA 260
>gi|50423849|ref|XP_460509.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49656178|emb|CAG88822.1| DEHA2F03300p [Debaryomyces hansenii CBS767]
Length = 263
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQEHVKVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEASYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY+ T+DGRTIRYPDPLI+AND++K+DL T KIT+FI FD G +VMVTG
Sbjct: 126 VKKVQLGKRGIPYVVTHDGRTIRYPDPLIRANDSVKVDLATGKITDFISFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF +G + KP +SLPKGKGI
Sbjct: 186 GRNMGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLPKGKGI 245
Query: 180 KLSIIEEARKRQ 191
KLSI EE +R+
Sbjct: 246 KLSISEERDRRR 257
>gi|365991206|ref|XP_003672432.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
gi|343771207|emb|CCD27189.1| hypothetical protein NDAI_0J02970 [Naumovozyma dairenensis CBS 421]
Length = 261
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 153/192 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYP GFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPTGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT++IKFD G +V V G
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|402075079|gb|EJT70550.1| 40S ribosomal protein S4-A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 261
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 154/192 (80%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VDAKVRTD TYP GFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDAKVRTDATYPTGFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RT+RYPDPLIK NDT+K+DL T KIT+FIKFD G + MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTVRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAMAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G+I +RE+H G F +H++DA+ + FATR NVF +G KPW+SLPKGKG+K
Sbjct: 186 GRNMGRIGVITHRERHHGGFNIVHLKDAIDNTFATRESNVFVVGT-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 245 LTIAEERDRRRA 256
>gi|307191745|gb|EFN75187.1| 40S ribosomal protein S4 [Harpegnathos saltator]
Length = 262
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 150/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD K+RTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKIRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KGIP++ T+DGRTIRYPDPLIK NDTI LD+ + KI + I+FD GN+ M+T
Sbjct: 126 VRRVQTGPKGIPFLVTHDGRTIRYPDPLIKVNDTIHLDIASGKILDSIRFDSGNLCMITS 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ H++DA GH FATRL NVF IGKGTK +VSLP+ KG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R A
Sbjct: 246 LSIAEERDRRLA 257
>gi|109509108|gb|ABG34271.1| 40S ribosomal protein S4 [Culex pipiens pallens]
Length = 262
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 155/198 (78%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ +D KVRTD YPAGFMDV++I KT+ENFRL+YD KGRF +H I EEAK+KL K
Sbjct: 66 MQRHIKIDGKVRTDINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +KF+ GN+ M+TG
Sbjct: 126 VKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G + REKH GSFE +HI+D+ GH FATRL NVF IGKGTK ++SLPKGKG+K
Sbjct: 186 GRNLGRCGTVIQREKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPKGKGVK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE KR LA+ AA
Sbjct: 246 LSIAEERDKR--LASKAA 261
>gi|170034084|ref|XP_001844905.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
gi|167875313|gb|EDS38696.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
Length = 263
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 155/198 (78%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ +D KVRTD YPAGFMDV++I KT+ENFRL+YD KGRF +H I EEAK+KL K
Sbjct: 67 MQRHIKIDGKVRTDINYPAGFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLK 126
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +KF+ GN+ M+TG
Sbjct: 127 VKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITG 186
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G + REKH GSFE +HI+D+ GH FATRL NVF IGKGTK ++SLPKGKG+K
Sbjct: 187 GRNLGRCGTVIQREKHPGSFEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPKGKGVK 246
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE KR LA+ AA
Sbjct: 247 LSIAEERDKR--LASKAA 262
>gi|453079891|gb|EMF07943.1| 40S ribosomal protein S4 [Mycosphaerella populorum SO2202]
Length = 261
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAG+MDV++I KT ENFRL+YDTKGRF +H I +EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEAQYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K++LET KI +FI+FD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATS 196
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAYAQA 260
>gi|50426545|ref|XP_461869.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
gi|49657539|emb|CAG90330.1| DEHA2G07392p [Debaryomyces hansenii CBS767]
Length = 263
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 155/192 (80%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD T+PAGFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQEHVKVDGKVRTDATFPAGFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEASYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++GIPY+ T+DGRTIRYPDPLI+AND++K+DL T K+T+FI FD G +VMVTG
Sbjct: 126 VKKVQLGKRGIPYVVTHDGRTIRYPDPLIRANDSVKVDLATGKVTDFISFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REKH+G F+ +HI+D+L + F TRL NVF +G + KP +SLPKGKGI
Sbjct: 186 GRNMGRVGVITHREKHEGGFDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLPKGKGI 245
Query: 180 KLSIIEEARKRQ 191
KLSI EE +R+
Sbjct: 246 KLSISEERDRRR 257
>gi|444722371|gb|ELW63068.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 618
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 153/197 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I +EAK+KLCKV
Sbjct: 120 QRFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCKV 179
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R + G KGIP++ T+D RTIRY DPLIK NDTI++DLET K ++FIKFD GN+ MV GG
Sbjct: 180 RKIFLGTKGIPHLVTHDARTIRYLDPLIKVNDTIQIDLETGKSSDFIKFDTGNLCMVAGG 239
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
+ GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KP +SLP+GKGI+L
Sbjct: 240 ASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPGISLPRGKGIRL 299
Query: 182 SIIEEARKRQALATSAA 198
+I +E KR A S +
Sbjct: 300 TIAKERDKRPAAKQSTS 316
>gi|452837123|gb|EME39066.1| ribosomal protein S4e-like protein [Dothistroma septosporum NZE10]
Length = 262
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVISIEKTGENFRLVYDTKGRFTVHRITTEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K++LET KI +FI+FD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIRVNDTVKINLETGKIEDFIRFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 245 LSIAEERDRRRAHALAG 261
>gi|440897387|gb|ELR49092.1| hypothetical protein M91_06956 [Bos grunniens mutus]
Length = 263
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 151/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KV TD TYPAGFMDV+SI KT ENF L+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFINIDGKVSTDITYPAGFMDVISIDKTRENFCLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D TI YP PLIK NDTI++DLET +IT+FIKFD GN+ MVTG
Sbjct: 126 VKKIFVGTKGIPHLVTHDAHTIHYPHPLIKVNDTIQIDLETGRITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I N+E+H GS + +H++D G+ FAT+L N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNQERHSGSSDVVHVKDVNGNSFATQLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>gi|385304652|gb|EIF48661.1| 40s ribosomal protein s4 [Dekkera bruxellensis AWRI1499]
Length = 262
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M+R V VD KVRTD T+PAGFMDV+S+ TNENFRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MERQVKVDGKVRTDTTFPAGFMDVISLDATNENFRLVYDIKGRFAIHRITPEEASYKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPYI T+DGRTIRYPDP IK D++K+DL+T KI+ FIKF+ G + MVTG
Sbjct: 126 VKKVQLGKKGIPYIVTHDGRTIRYPDPAIKVGDSVKVDLDTGKISSFIKFETGKLAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT-KPWVSLPKGKGI 179
GRN GRVG+I ++E+H+G F+ ++I+D+L + F TRL NVF IG+G KPW+SLPKGKG+
Sbjct: 186 GRNLGRVGVITHKERHEGGFDLVYIKDSLDNTFITRLNNVFVIGEGAGKPWISLPKGKGV 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R+A
Sbjct: 246 KLSISEERDRRRA 258
>gi|449016469|dbj|BAM79871.1| 40S ribosomal protein S4 [Cyanidioschyzon merolae strain 10D]
Length = 257
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD+T+PAGFMDV+ I KTNE FRLLYDTKGRF LH I EE K+KLC+
Sbjct: 66 MQRLVRVDGKVRTDRTFPAGFMDVIHIEKTNETFRLLYDTKGRFVLHRITPEEGKYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
++ Q G +GIPYI T+DGRTIRYPDPLIK +DT+ LD+ET KIT+F+KFD+G + M+TG
Sbjct: 126 IKRQQLGARGIPYIVTHDGRTIRYPDPLIKVHDTVVLDIETGKITDFVKFDIGALCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG++++RE+H G+ E +H++DA G EFAT++ NVF IG+ K VSLP+GKG+K
Sbjct: 186 GHNIGRVGVVQHRERHPGATEIVHLKDAAGREFATQISNVFVIGR-EKSLVSLPRGKGVK 244
Query: 181 LSIIEEARKRQAL 193
LS++EE +R L
Sbjct: 245 LSVVEERERRGLL 257
>gi|429860169|gb|ELA34915.1| 40s ribosomal protein s4 [Colletotrichum gloeosporioides Nara gc5]
Length = 262
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+PAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDHKVRTDITFPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+T KI +FIKFD G++ MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAQALAG 261
>gi|344304439|gb|EGW34671.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
Length = 262
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 153/192 (79%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VDAKVRTD T+P GFMDV+++ TNE+FRL+YD KGRF +H I EEA +KL K
Sbjct: 66 MQQHVKVDAKVRTDSTFPTGFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEAAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDPLI+ NDT+K+DL T KI++FI FD G +VMVTG
Sbjct: 126 VKKVQLGKKGIPYVVTHDGRTIRYPDPLIRVNDTVKIDLATGKISDFIPFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG I ++E H G F+ +HI+D+L + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGAIVHKEHHAGGFDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQ 191
KL+I EE +R+
Sbjct: 246 KLTISEERDRRR 257
>gi|154290538|ref|XP_001545862.1| 40S ribosomal protein S4 [Botryotinia fuckeliana B05.10]
gi|347841950|emb|CCD56522.1| similar to 40S ribosomal protein S4 [Botryotinia fuckeliana]
Length = 262
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 154/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+ I KT+ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDATYPAGFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPSIKVNDTVKIDLATGKITDFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAHAIAG 261
>gi|389739254|gb|EIM80448.1| 40S ribosomal protein S4 [Stereum hirsutum FP-91666 SS1]
Length = 263
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 151/195 (77%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYP GFMDV++I K+ E+FRLLYD KGRF +H I EEA++KL KV
Sbjct: 67 QRLIKVDGKVRTDNTYPTGFMDVLTIEKSGEHFRLLYDVKGRFTIHRITPEEAEYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G K +PYI T+DGRTIRYPDPLIK NDT+K D NKIT++ KFD GN+VM+TGG
Sbjct: 127 KKVAIGAKAVPYIVTHDGRTIRYPDPLIKVNDTVKFDFTQNKITDYAKFDTGNIVMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +REKH G F+ +H++DAL FATR+ N+F IG+GTKPW+SLPKGKG KL
Sbjct: 187 RNMGRSGVIVHREKHIGDFDIVHVKDALDRTFATRITNIFVIGEGTKPWISLPKGKGTKL 246
Query: 182 SIIEE--ARKRQALA 194
+I EE R++Q A
Sbjct: 247 TIAEERDVRRKQRAA 261
>gi|119632119|gb|EAX11714.1| hCG38986, isoform CRA_b [Homo sapiens]
Length = 245
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/198 (61%), Positives = 151/198 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVR D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H I EEAK+KLCK
Sbjct: 48 MQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV
Sbjct: 108 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIA 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 168 GANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 227
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 228 LTIAEERDKRLAAKQSSG 245
>gi|312371216|gb|EFR19456.1| hypothetical protein AND_22381 [Anopheles darlingi]
Length = 262
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 152/198 (76%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ +D +VRTD YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK+KL K
Sbjct: 66 MQRHIKIDGRVRTDPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +P++ T+DGRTIRYPDP I ND+I+ D+ T K+ E +KF+ GN+ M+TG
Sbjct: 126 VKRVQIGPKKVPFLLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G + REKH GSFE +H++DA GH FATRL NVF IGKGTK ++SLPKGKG+K
Sbjct: 186 GRNLGRCGTVMQREKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPKGKGVK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE +R LA AA
Sbjct: 246 LSISEERDRR--LANKAA 261
>gi|145355247|ref|XP_001421876.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144582115|gb|ABP00170.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 253
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/186 (63%), Positives = 149/186 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD K+R DK YP G MDVVSI K++E+FRL+YD KGRF +H I EA++KLCK
Sbjct: 66 MQRVVKVDGKIRMDKCYPCGIMDVVSIEKSDEHFRLIYDNKGRFVVHRIEAIEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+S + G KG+P + +DGRTIRYPDPLIK D++ +D+ TNKIT+F+KFDVG + M+TG
Sbjct: 126 VKSKKLGDKGVPCVGLHDGRTIRYPDPLIKEGDSVMVDIATNKITDFVKFDVGALCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I+ REKH GSFE +H++DA G EFATR NVF IG G+KP +SLPKGKGIK
Sbjct: 186 GRNAGRVGVIQRREKHIGSFEIVHLKDAAGQEFATRATNVFAIGTGSKPMISLPKGKGIK 245
Query: 181 LSIIEE 186
LSI++E
Sbjct: 246 LSIVDE 251
>gi|170086746|ref|XP_001874596.1| 40S ribosomal protein S4 [Laccaria bicolor S238N-H82]
gi|164649796|gb|EDR14037.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYPAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKIDGKVRTDPTYPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEANYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G +G+P+I T+DGRTIRYPDPLI+ NDT+K DLE KIT+++KFD GN+VM+TGG
Sbjct: 127 RRVAIGARGVPHIVTHDGRTIRYPDPLIQVNDTVKFDLEQGKITDYVKFDTGNIVMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +REKH G F+ +H++D+L FATR+ N+F IG+G KPW+SLPKGKG KL
Sbjct: 187 RNMGRAGVIVHREKHIGGFDIVHVKDSLDRTFATRVTNIFVIGEGIKPWISLPKGKGTKL 246
Query: 182 SIIEE 186
+I EE
Sbjct: 247 TISEE 251
>gi|380487060|emb|CCF38284.1| 40S ribosomal protein S4 [Colletotrichum higginsianum]
Length = 262
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL+T KI +FIKFD G++ MVTG
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPK KG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKSKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRANALAG 261
>gi|326471544|gb|EGD95553.1| 40S ribosomal protein S4 [Trichophyton tonsurans CBS 112818]
gi|326481846|gb|EGE05856.1| 40S ribosomal protein S4 [Trichophyton equinum CBS 127.97]
Length = 259
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 155/194 (79%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+F+KFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFVKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPWVSLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+A+A
Sbjct: 245 LTIAEERDRRRAMA 258
>gi|296424161|ref|XP_002841618.1| 40S ribosomal protein S4 [Tuber melanosporum Mel28]
gi|295637863|emb|CAZ85809.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV++I KT E FRL+YDTKGRF +H I + EA +KL K
Sbjct: 148 MQRLVKVDGKVRTDPTFPAGFMDVITIEKTGERFRLIYDTKGRFTIHRITETEASYKLAK 207
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIPY+ T+D RTIRYPDP I+ NDT+K+D+ET KI +FI+FD G + M TG
Sbjct: 208 VKRVQLGAKGIPYLVTHDARTIRYPDPTIRVNDTVKIDIETGKIIDFIRFDTGTIAMATG 267
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F+ +HI+DA+ + FATRL NVF +G KPW+SLPKGKG+K
Sbjct: 268 GRNMGRVGVITHRERHDGGFDIVHIKDAIDNTFATRLSNVFIVGPD-KPWISLPKGKGVK 326
Query: 181 LSIIEEARKRQALATS 196
L+I EE +R+A S
Sbjct: 327 LTIAEERDRRRAHTLS 342
>gi|258573501|ref|XP_002540932.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
gi|237901198|gb|EEP75599.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
Length = 262
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P GFMDV+SI KT ENFRL+YDTKGRF +H I EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPTGFMDVISIEKTGENFRLVYDTKGRFTVHRISGEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KI++FIKFD G + MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKISDFIKFDTGVICMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHEGGFGIVHIKDAIDNSFATRESNVFVIGH-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A+A +
Sbjct: 245 LSIAEERDRRRAVALAG 261
>gi|88703062|ref|NP_001034656.1| 40S ribosomal protein S4, Y isoform 2 [Homo sapiens]
gi|27805713|sp|Q8TD47.3|RS4Y2_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 2
gi|20269858|gb|AAM18074.1|AF497481_1 ribosomal protein S4 [Homo sapiens]
Length = 263
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/198 (61%), Positives = 151/198 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVR D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H I EEAK+KLCK
Sbjct: 66 MQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIA 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|294889902|ref|XP_002772984.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239877687|gb|EER04800.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 153/200 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD +YPAGFMDV++I KT ENFRLL+DTKGRF +H I +EA +KLC+
Sbjct: 66 MQRLIKVDGKVRTDMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAAYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+PY NT+DGRTIRYPDP IK ND++++D++T K+ +F+KF++G VM+TG
Sbjct: 126 VKKVYMGSKGVPYANTHDGRTIRYPDPEIKENDSVRVDIQTGKVLDFLKFEIGATVMMTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H G+FE IH++DA G+ FATRL NVF IG KPWVSLPKG G++
Sbjct: 186 GNNIGRVGVITHRERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPKGDGVQ 245
Query: 181 LSIIEEARKRQALATSAAAQ 200
LS +E+ R A Q
Sbjct: 246 LSTVEDRHMRMKKNRIAGQQ 265
>gi|361125389|gb|EHK97435.1| putative 40S ribosomal protein S4-B [Glarea lozoyensis 74030]
Length = 262
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDATYPAGFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+FIKFD G + MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVIAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GRNIGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIGS-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAHAIAG 261
>gi|315047114|ref|XP_003172932.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
gi|311343318|gb|EFR02521.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
Length = 259
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 155/194 (79%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+++KFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDYVKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+A+A
Sbjct: 245 LTIAEERDRRRAMA 258
>gi|296804264|ref|XP_002842984.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
gi|238845586|gb|EEQ35248.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
Length = 259
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 155/194 (79%), Gaps = 1/194 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRIQTEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPNIRVNDTVKIDIATGKITDFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H+G F +HI+DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHEGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALA 194
L+I EE +R+A+
Sbjct: 245 LTIAEERDRRRAMG 258
>gi|332376168|gb|AEE63224.1| unknown [Dendroctonus ponderosae]
Length = 261
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 153/195 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDVV+I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP++ T+DGRTIRYPDP +K NDTI+L++ T+KI ++IKF+ GN+ +TG
Sbjct: 126 VRKVGTGPKGIPFLVTHDGRTIRYPDPNVKVNDTIQLEIATSKILDYIKFESGNLCQITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+DA H FATRL NVF IGKG+K +VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDANEHVFATRLNNVFIIGKGSKAFVSLPRGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLASKT 260
>gi|403218384|emb|CCK72874.1| hypothetical protein KNAG_0M00210 [Kazachstania naganishii CBS
8797]
Length = 261
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M+RHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MERHVKVDGKVRTDTTYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G++G+PY+ T+DGRTIRYPDP IK NDT+K+DL + KI ++IKFD G +V VTG
Sbjct: 126 VKKVQLGKRGVPYVVTHDGRTIRYPDPNIKINDTVKIDLASGKIVDYIKFDTGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIIHKERHDGGFDLVHIKDSLDNTFVTRLNNVFIIGETGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 246 LTIAEERDRRRA 257
>gi|294875217|ref|XP_002767227.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
gi|239868773|gb|EEQ99944.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
ATCC 50983]
Length = 268
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 153/200 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD +YPAGFMDV++I KT ENFRLL+DTKGRF +H I +EA +KLC+
Sbjct: 66 MQRLIKVDGKVRTDMSYPAGFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAAYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+PY NT+DGRTIRYPDP IK ND++++D++T K+ +F+KF++G VM+TG
Sbjct: 126 VKKVYMGSKGVPYANTHDGRTIRYPDPEIKENDSVRIDIQTGKVLDFLKFEIGATVMMTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H G+FE IH++DA G+ FATRL NVF IG KPWVSLPKG G++
Sbjct: 186 GNNIGRVGVITHRERHPGNFEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPKGDGVQ 245
Query: 181 LSIIEEARKRQALATSAAAQ 200
LS +E+ R A Q
Sbjct: 246 LSTVEDRHLRMKKNRIAGQQ 265
>gi|326523807|dbj|BAJ93074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 154/200 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD K RTD T+PAGFMDV+SI KTNE FRLLYDTKGRF + I EAK+KL K
Sbjct: 66 MQRLVKVDGKTRTDNTFPAGFMDVISIEKTNETFRLLYDTKGRFAVQRITPAEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIPY++T+DGRTIRYPDP IK +DT+K DLE+ KIT+ F++GN+VM+TG
Sbjct: 126 VKKIYTGTKGIPYLSTHDGRTIRYPDPAIKIHDTVKYDLESGKITDIAPFELGNLVMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H GSF+ IH++DA+G +FATR+ NVF IGKGTK VSLP KGIK
Sbjct: 186 GANLGRVGVIVSRERHPGSFDIIHVKDAVGQQFATRMSNVFVIGKGTKSLVSLPARKGIK 245
Query: 181 LSIIEEARKRQALATSAAAQ 200
S++EEA + A AAQ
Sbjct: 246 KSVLEEADFARKHAAELAAQ 265
>gi|327305991|ref|XP_003237687.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
gi|326460685|gb|EGD86138.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
Length = 259
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 154/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP I+ NDT+K+D+ T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPSIRVNDTVKIDIATGKITDFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG+ KPWVSLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPKGKGVK 244
Query: 181 LSIIEEARKRQAL 193
L+I EE +R+A+
Sbjct: 245 LTIAEERDRRRAM 257
>gi|340372095|ref|XP_003384580.1| PREDICTED: 40S ribosomal protein S4-like [Amphimedon queenslandica]
Length = 262
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 150/189 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD T+PAG MDVV+I KT+E FRLLYD KGRF +H I EEAK+KL KV
Sbjct: 67 QRLIKVDGKVRTDTTFPAGLMDVVTIEKTSEQFRLLYDVKGRFCVHRITPEEAKYKLGKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ Q G KGIPY+ T+DGRTIRYPDPLIK NDT+++D+ T KIT+F+KFDVGN+VMV GG
Sbjct: 127 KRAQLGPKGIPYLVTHDGRTIRYPDPLIKVNDTVRIDIATGKITDFVKFDVGNLVMVVGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG+I NRE+H GSF+ IHI+DA G+ FATR NVF IGK K +SLPK KGI+L
Sbjct: 187 RNLGRVGVITNRERHHGSFDIIHIKDAKGNTFATRQTNVFVIGKNNKALISLPKAKGIRL 246
Query: 182 SIIEEARKR 190
+I EE +R
Sbjct: 247 TIAEERDRR 255
>gi|301101263|ref|XP_002899720.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
gi|262102722|gb|EEY60774.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
Length = 261
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 122/196 (62%), Positives = 152/196 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ V VD KVR D +PAGFMDVV +PKT + FRL+YDTKGRF LH I DEE KFKL K
Sbjct: 66 MQKSVKVDGKVRVDPDFPAGFMDVVELPKTGDQFRLMYDTKGRFVLHRISDEEKKFKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V ++ +K IPYI T DGRTIRYPDPLIK DT+K+DLET K+ + IKF+VGN+V +T
Sbjct: 126 VIRQEYTKKAIPYIATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNLVTITR 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVGI+ N E+H+GSF H++D+ G++FATRLGNVF +GK +PWVSLPKGKGIK
Sbjct: 186 GRNSGRVGILHNVERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATS 196
L+I+EE ++ A +
Sbjct: 246 LNILEERELKEKKANN 261
>gi|440633275|gb|ELR03194.1| 40S ribosomal protein S4 [Geomyces destructans 20631-21]
Length = 261
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 153/192 (79%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H ++ EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDTTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRVQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+FIKFD G + M TG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ + FATR NVF IG G KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNSFATRENNVFVIG-GEKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 245 LTIAEERDRRRA 256
>gi|395514460|ref|XP_003761435.1| PREDICTED: 40S ribosomal protein S4-like [Sarcophilus harrisii]
Length = 263
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 149/198 (75%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D K+ TD TYPAGFMDV+SI K E+F L+YDTKG F +H I E AK+KLCK
Sbjct: 66 MQHFIKIDGKIHTDITYPAGFMDVISIEKMGEHFHLVYDTKGCFAVHHITVEAAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
R + G KGIP++ T+D R IRYPDPLIK NDT+++DLE KIT+FIKFD N+ MVTG
Sbjct: 126 ARKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTVQIDLEDGKITDFIKFDTSNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+S P+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISPPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>gi|393221758|gb|EJD07242.1| hypothetical protein FOMMEDRAFT_164273 [Fomitiporia mediterranea
MF3/22]
Length = 369
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 146/185 (78%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD+T+P GFMDVV+I K+ E+FRLLYD KGRF +H I EEA +KLCKV
Sbjct: 172 QRIIRVDGKVRTDETFPTGFMDVVTIEKSGEHFRLLYDVKGRFAIHRITPEEASYKLCKV 231
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R + G+ +P+I T+DGRTIRYPDPLIK NDT+K D E NKIT+F+KFD GN+VMVTGG
Sbjct: 232 RKIGIGRNAVPHIVTHDGRTIRYPDPLIKVNDTVKFDFEQNKITDFVKFDTGNIVMVTGG 291
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +REK+ G + +H++DAL F TR+ N+F IG+G KPW+SLPKGKG KL
Sbjct: 292 RNMGRAGVIVHREKNDGGHDMVHVRDALDRTFVTRVSNIFVIGEGIKPWISLPKGKGTKL 351
Query: 182 SIIEE 186
+I EE
Sbjct: 352 TISEE 356
>gi|208657539|gb|ACI30066.1| ribosomal protein S4 [Anopheles darlingi]
Length = 262
Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 151/198 (76%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ H+ +D +VRTD YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK+KL K
Sbjct: 66 MQHHIKIDGRVRTDPNYPAGFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +P++ T+DGRTIRYPDP I ND+I+ D+ T K+ E +KF+ GN+ M+TG
Sbjct: 126 VKRVQIGPKKVPFLLTHDGRTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G + REKH GSFE +H++DA GH FATRL NVF IGKGTK ++SLPKGKG+K
Sbjct: 186 GRNLGRCGTVMQREKHPGSFEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPKGKGVK 245
Query: 181 LSIIEEARKRQALATSAA 198
LSI EE +R LA AA
Sbjct: 246 LSISEERDRR--LANKAA 261
>gi|449301876|gb|EMC97885.1| hypothetical protein BAUCODRAFT_155152 [Baudoinia compniacensis
UAMH 10762]
Length = 263
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 152/197 (77%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAG+MDV++I KT ENFRL+YDTKGRF +H I +EE +KL K
Sbjct: 67 MQRLIQVDGKVRTDPNYPAGYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEGGYKLGK 126
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+DL T KIT+F+ FD G + M TG
Sbjct: 127 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDLATGKITDFVHFDTGVIAMATG 186
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 187 GRNMGRVGVITHRERHDGGFNVVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVK 245
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 246 LSIAEERDRRRAYALAG 262
>gi|320586588|gb|EFW99258.1| 40S ribosomal protein s4 [Grosmannia clavigera kw1407]
Length = 259
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 153/192 (79%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+QR + VD KVRTD TYP GFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 LQRLIKVDHKVRTDTTYPTGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K+DL T KIT+F+KFD G + M+TG
Sbjct: 126 VRRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGALAMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +H++DA+ + FATR NVF IG KPW+SLPKG+G+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHLKDAIDNTFATRESNVFVIGT-EKPWISLPKGRGVK 244
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 245 LTIAEERDRRRA 256
>gi|348666498|gb|EGZ06325.1| hypothetical protein PHYSODRAFT_356144 [Phytophthora sojae]
Length = 261
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/196 (62%), Positives = 152/196 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ V VD KVR D +PAGFMDVV +PKT + FRLLYDTKGRF LH I DEE KFKL K
Sbjct: 66 MQKSVKVDGKVRVDPDFPAGFMDVVELPKTGDQFRLLYDTKGRFVLHRISDEEKKFKLAK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V ++ +K IPYI T DGRTIRYPDPLIK DT+K+DLET K+ + IKF+VGN+V +T
Sbjct: 126 VIRQEYTKKAIPYIATNDGRTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNLVTITR 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVGI+ + E+H+GSF H++D+ G++FATRLGNVF +GK +PWVSLPKGKGIK
Sbjct: 186 GRNSGRVGILHHIERHQGSFNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATS 196
L+I+EE ++ A +
Sbjct: 246 LNILEERELKEKKANN 261
>gi|444516549|gb|ELV11206.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 258
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 152/193 (78%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H + EEAK+KLCK
Sbjct: 66 MQWFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRVTPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G++ IP++ +D TIRYPDPLIK NDTI++ L+T KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKISVGKE-IPHLVPHDVLTIRYPDPLIKVNDTIQIYLKTGKITDFIKFDTGNLCMVTG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP GKGI+
Sbjct: 185 GANLGRIGVITNRERHPGSFDVVHMKDANGNSFATRLSNIFVIGKGNKPWISLPWGKGIR 244
Query: 181 LSIIEEARKRQAL 193
L+I EE Q +
Sbjct: 245 LTIAEERDTEQWV 257
>gi|58257447|gb|AAW69345.1| 40S ribosomal protein S4-A-like protein [Magnaporthe grisea]
Length = 244
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 152/192 (79%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDVVSI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 48 MQRLVKVDGKVRTDSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++L+T KIT+FIKFD G + MVT
Sbjct: 108 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTA 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+K
Sbjct: 168 GNNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVK 226
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 227 LTIAEERDRRRA 238
>gi|353240563|emb|CCA72427.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
DSM 11827]
Length = 262
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/190 (63%), Positives = 148/190 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRTD YP GF DV++I K+ E+FRLLYD KGRF +H I EEA +KLCKV
Sbjct: 67 QRLVKVDGKVRTDIKYPVGFQDVITIEKSGEHFRLLYDVKGRFAIHRITPEEATYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G +G+PYI T+DGRTIRYPDP IK NDT+K DLE KIT F+KFD GNVV+VTGG
Sbjct: 127 KKVLIGNRGVPYIVTHDGRTIRYPDPDIKTNDTVKYDLEQGKITGFVKFDTGNVVVVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H G F+ +H++D L FATR+ N+F IG+GTKPW+SLPKGKG+KL
Sbjct: 187 RNMGRVGTITHRERHIGGFDIVHVKDVLDRTFATRVTNIFVIGEGTKPWISLPKGKGVKL 246
Query: 182 SIIEEARKRQ 191
+I EE +R+
Sbjct: 247 TISEERDQRR 256
>gi|389646755|ref|XP_003721009.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
gi|86196449|gb|EAQ71087.1| hypothetical protein MGCH7_ch7g494 [Magnaporthe oryzae 70-15]
gi|351638401|gb|EHA46266.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
Length = 262
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 152/192 (79%), Gaps = 1/192 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDVVSI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K++L+T KIT+FIKFD G + MVT
Sbjct: 126 VKRVQLGRGGIPFLVTHDARTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTA 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H G F +H++DA+ + F TR NVF IG KPW+SLPKGKG+K
Sbjct: 186 GNNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQA 192
L+I EE +R+A
Sbjct: 245 LTIAEERDRRRA 256
>gi|226507767|ref|NP_001147360.1| 40S ribosomal protein S4 [Zea mays]
gi|195610502|gb|ACG27081.1| 40S ribosomal protein S4 [Zea mays]
Length = 261
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/197 (61%), Positives = 154/197 (78%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I KT E+FRL+YDTKGRF +H I EEA++KL K
Sbjct: 65 MQRLIKVDGKVRTDPTYPAGFMDVITIEKTGEHFRLVYDTKGRFTVHRITGEEAEYKLGK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIR+PDP IK NDT+K+DL T KI +FI+FD G + M TG
Sbjct: 125 VKRVQLGKGGIPFLVTHDARTIRFPDPAIKVNDTVKIDLTTGKIQDFIRFDTGVIAMATG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 185 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGQ-EKPWISLPKGKGVK 243
Query: 181 LSIIEEARKRQALATSA 197
LSI EE +R+A A +
Sbjct: 244 LSIAEERDRRRAHALAG 260
>gi|265141272|gb|ACY74439.1| 40S ribosomal protein S4-like protein [Carukia barnesi]
Length = 227
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 155/197 (78%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVV+I KT +NFRLLYD KGRF H I EEA +KL KV
Sbjct: 29 QRLIKVDGKVRTDPTYPAGFMDVVTIEKTGDNFRLLYDVKGRFVCHRITPEEAVYKLGKV 88
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G + +PY+ T+DGRTIRYPDPL+K NDT+ +D+ T KIT+FIKFD GN VMV GG
Sbjct: 89 KRTGVGIRSVPYLVTHDGRTIRYPDPLVKVNDTVIIDIRTGKITDFIKFDTGNAVMVIGG 148
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR+GII +RE+H GS++ +HI+DA+G++FATRLGN+F IG+GTK +++P+GKGI+L
Sbjct: 149 RNTGRIGIITHRERHPGSYDIVHIKDAVGNQFATRLGNIFIIGRGTKGMITVPRGKGIRL 208
Query: 182 SIIEEARKRQALATSAA 198
SI EE +R A + ++
Sbjct: 209 SIAEERDRRLAEKSKSS 225
>gi|307178149|gb|EFN66957.1| 40S ribosomal protein S4 [Camponotus floridanus]
Length = 261
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 148/192 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD K+R D YPAGFMDV++I KT E FRL+YD KGRF H I EEAK+KLCK
Sbjct: 65 MQRLIKVDGKIRIDPNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+ + KI + I+FD GN+ M+TG
Sbjct: 125 VKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIASGKILDSIRFDSGNLCMITG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+D GH FATRL NVF IGKGTK +VSLP+ +G+K
Sbjct: 185 GRNLGRVGTVVSRERHPGSFDICHIKDTQGHTFATRLNNVFIIGKGTKAYVSLPRDRGVK 244
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 245 LSIAEERDKRLA 256
>gi|226469682|emb|CAX76671.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 245
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 49 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKV 108
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 109 RKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 168
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+L
Sbjct: 169 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRL 228
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 229 SIIEERDKR 237
>gi|395754117|ref|XP_003780546.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, X isoform
[Pongo abelii]
Length = 319
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 152/199 (76%), Gaps = 1/199 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDT-KGRFRLHSIRDEEAKFKLC 59
MQR + +D KVRTD TYPAGFMDV+SI KT ENF T + F +H I EEAK+KLC
Sbjct: 121 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFPSGSMTPRVAFAVHRITPEEAKYKLC 180
Query: 60 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
KVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVT
Sbjct: 181 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 240
Query: 120 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGI 179
GG N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG K W+SLP+GKGI
Sbjct: 241 GGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKSWISLPRGKGI 300
Query: 180 KLSIIEEARKRQALATSAA 198
+L+I EE KR A S+
Sbjct: 301 RLTIAEERDKRLAAKQSSG 319
>gi|226469686|emb|CAX76673.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 68 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 128 RKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+L
Sbjct: 188 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRL 247
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 248 SIIEERDKR 256
>gi|47208976|emb|CAF90008.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 151/198 (76%), Gaps = 8/198 (4%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 48 MQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DLE+ KIT+FIKFD G
Sbjct: 108 VKKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLESGKITDFIKFDTGA------ 161
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
N GR+G+I NRE+H GSF+ +H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+
Sbjct: 162 --NLGRIGVITNRERHPGSFDVVHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIR 219
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A +++
Sbjct: 220 LTIAEERDKRLAAKQASS 237
>gi|401888387|gb|EJT52345.1| hypothetical protein A1Q1_04556 [Trichosporon asahii var. asahii
CBS 2479]
gi|406696387|gb|EKC99677.1| hypothetical protein A1Q2_05987 [Trichosporon asahii var. asahii
CBS 8904]
Length = 262
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 146/185 (78%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD+T+PAGFMDV+SI K+ E+FRLLYD KGRF +H I EEA FKLCKV
Sbjct: 67 QRLIQVDGKVRTDETFPAGFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATFKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ Q G KG+PY+ T+DGRTIRYPDP IK NDTIK D + NKIT +KF+ GNVVM+TGG
Sbjct: 127 KKCQLGAKGVPYVVTHDGRTIRYPDPNIKVNDTIKFDFQQNKITGHLKFEPGNVVMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I ++E+H G F+ +H++D L FATR+GNVF IG+G K VSLPKGKG+KL
Sbjct: 187 RNMGRSGVIVHKERHLGGFDIVHVRDVLDRTFATRIGNVFVIGEGAKAQVSLPKGKGVKL 246
Query: 182 SIIEE 186
+I EE
Sbjct: 247 TITEE 251
>gi|29841450|gb|AAP06482.1| SJCHGC06323 protein [Schistosoma japonicum]
gi|226469680|emb|CAX76670.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469684|emb|CAX76672.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469688|emb|CAX76674.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226469694|emb|CAX76677.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473022|emb|CAX71197.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473024|emb|CAX71198.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473026|emb|CAX71199.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
gi|226473028|emb|CAX71200.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 68 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 128 RKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+L
Sbjct: 188 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRL 247
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 248 SIIEERDKR 256
>gi|226469690|emb|CAX76675.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 68 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 128 RKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+L
Sbjct: 188 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRL 247
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 248 SIIEERDKR 256
>gi|221110073|ref|XP_002154886.1| PREDICTED: 40S ribosomal protein S4-like [Hydra magnipapillata]
Length = 259
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 150/191 (78%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD YPAGFMDVVSI +T+ENFRLLYD KGRF + I EE+ +KL KV
Sbjct: 67 QRLIKVDGKVRTDICYPAGFMDVVSIERTHENFRLLYDVKGRFVCNRISAEESAYKLAKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ GQ IPYI T+DGRTIRYPDP IK NDT+ +D++T KIT+FIKFD GN+VMVT G
Sbjct: 127 KRSAVGQNSIPYIVTHDGRTIRYPDPSIKVNDTVIVDIKTGKITDFIKFDTGNLVMVTAG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII NRE+H S++ +H++D G++FATRL N+F IGKG+KP VSLP+GKG++L
Sbjct: 187 RNTGRVGIITNRERHPSSYDIVHVKDVTGNQFATRLSNIFLIGKGSKPLVSLPRGKGVRL 246
Query: 182 SIIEEARKRQA 192
+I +E +R A
Sbjct: 247 TIADERDRRMA 257
>gi|226469692|emb|CAX76676.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
Length = 264
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 68 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G G+P+I T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 128 RKVLVGHGGVPFIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+L
Sbjct: 188 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRL 247
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 248 SIIEERDKR 256
>gi|426243307|ref|XP_004015500.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 251
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 150/198 (75%), Gaps = 12/198 (6%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NR++H GSF+ +H++DA G+ F G KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRKRHPGSFDVVHVKDANGNSF------------GNKPWISLPRGKGIR 233
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 234 LTIAEERDKRLAAKQSSG 251
>gi|256072591|ref|XP_002572618.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044251|emb|CCD81798.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 245
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 49 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKV 108
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G G+PYI T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 109 KKVLVGHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 168
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+L
Sbjct: 169 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRL 228
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 229 SIIEERDKR 237
>gi|256072589|ref|XP_002572617.1| 40S ribosomal protein S4 [Schistosoma mansoni]
gi|360044250|emb|CCD81797.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
Length = 264
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 68 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G G+PYI T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 128 KKVLVGHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK KPW+SLPK +GI+L
Sbjct: 188 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRL 247
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 248 SIIEERDKR 256
>gi|392576968|gb|EIW70098.1| hypothetical protein TREMEDRAFT_43729 [Tremella mesenterica DSM
1558]
Length = 263
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 120/183 (65%), Positives = 143/183 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+TYP GFMDV++I ++ ENFRLLYD KGRF +H I EEA FKLCK
Sbjct: 66 MQRTIKVDGKVRTDETYPTGFMDVITIDRSGENFRLLYDVKGRFTVHRISPEEATFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR Q G KG+PY+ T+DGRTIRYPDP IK NDTIK D NK+ IKF+VGNVVMVTG
Sbjct: 126 VRKHQLGPKGVPYVVTHDGRTIRYPDPAIKVNDTIKYDFVQNKVVGIIKFEVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G+I +RE+H G F+ +H++D L FATRL N+F IG+G+K VSLPKGKG+K
Sbjct: 186 GRNMGRSGVIVHRERHLGGFDIVHVRDVLDRTFATRLSNIFVIGEGSKVQVSLPKGKGVK 245
Query: 181 LSI 183
LSI
Sbjct: 246 LSI 248
>gi|358056143|dbj|GAA97883.1| hypothetical protein E5Q_04563 [Mixia osmundae IAM 14324]
Length = 283
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 152/208 (73%), Gaps = 18/208 (8%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYP GFMDVVSI K+ E+FR+LYD KGRF +H I EEA++KLCKV
Sbjct: 68 QRLIKVDGKVRTDPTYPTGFMDVVSIEKSGEHFRILYDVKGRFAIHRITAEEAQYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE------------------TNK 103
+ VQ G KG+PY+ T+DGRTIRYPDP IK ND+IKL L +K
Sbjct: 128 KKVQLGAKGVPYLVTHDGRTIRYPDPAIKVNDSIKLVLPDTINPAATHSGAASAVATVHK 187
Query: 104 ITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 163
I IKF+VGN+VM TGGRN GR G+I +RE+H G F+ +H++D++ H F+TRLGNVF +
Sbjct: 188 IDGHIKFEVGNLVMCTGGRNMGRAGVIVHRERHMGGFDIVHVRDSMDHTFSTRLGNVFLV 247
Query: 164 GKGTKPWVSLPKGKGIKLSIIEEARKRQ 191
G+G+K WVSLPKGKGIKLSI EE +R+
Sbjct: 248 GEGSKAWVSLPKGKGIKLSIAEERDQRR 275
>gi|398388631|ref|XP_003847777.1| 40S ribosomal protein S4 [Zymoseptoria tritici IPO323]
gi|339467650|gb|EGP82753.1| hypothetical protein MYCGRDRAFT_106489 [Zymoseptoria tritici
IPO323]
Length = 262
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 151/197 (76%), Gaps = 1/197 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H I EEA++KL K
Sbjct: 66 MQRLIKVDGKVRTDPTYPAGFMDVIGIEKTGENFRLVYDTKGRFTVHRITGEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+++ T KI +FI FD G + M TG
Sbjct: 126 VNRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKINIATGKIEDFIHFDTGVIAMATG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+I +RE+H G F +HI+DA+ +EFATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVITHRERHDGGFNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVK 244
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R+A A +
Sbjct: 245 LTIAEERDRRRAQALAG 261
>gi|238505502|ref|XP_002383974.1| 40S ribosomal protein S4 [Aspergillus flavus NRRL3357]
gi|317151420|ref|XP_001824650.2| 40S ribosomal protein S4 [Aspergillus oryzae RIB40]
gi|220690088|gb|EED46438.1| 40S ribosomal protein S4, putative [Aspergillus flavus NRRL3357]
gi|391863079|gb|EIT72393.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 261
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/183 (63%), Positives = 148/183 (80%), Gaps = 1/183 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+PAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLIQVDGKVRTDPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+ GIP++ T+D RTIRYPDP IK NDT+K+D+ T KIT+F +FD G V+MVTG
Sbjct: 126 VKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKVDVATGKITDFARFDTGVVIMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ +RE+H G F +H++DA+ + FATR NVF IG+ KPW+SLPKGKG+K
Sbjct: 186 GRNMGRVGVVTHRERHDGGFNIVHVKDAVDNTFATRESNVFVIGQ-DKPWISLPKGKGVK 244
Query: 181 LSI 183
LSI
Sbjct: 245 LSI 247
>gi|108861826|gb|ABG21815.1| 40S ribosomal protein S4-like protein [Schistosoma mansoni]
Length = 264
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/189 (62%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF + I +EAK+KLCKV
Sbjct: 68 QRLVKVDGRVRTDKKYPAGFMDVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G G+PYI T+D RTIRYPDP IK NDTI++D+ T K+ IKF+ GN+ MVTGG
Sbjct: 128 KKVLVGHGGVPYIVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I E+H GS E +H++D+ GH+F TRL N+F IGK +PW+SLPK +GI+L
Sbjct: 188 RNLGRVGTITQWERHPGSVEMVHVRDSTGHQFVTRLNNIFIIGKSNQPWISLPKNRGIRL 247
Query: 182 SIIEEARKR 190
SIIEE KR
Sbjct: 248 SIIEERDKR 256
>gi|28630193|gb|AAN77885.1| ribosomal protein S4 [Branchiostoma lanceolatum]
Length = 238
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 143/183 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YP+GFMD ++I KT ENFRL+ D KGRF +H I EEAK+KLCK
Sbjct: 56 MQRLIKVDGKVRTDRCYPSGFMDAITIEKTAENFRLICDVKGRFTVHRITPEEAKYKLCK 115
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ IKFD GNV MVTG
Sbjct: 116 VRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTG 175
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++ NRE+H GS + +H++D GH FATRL N+F IG+G KPWVSL KGKGI
Sbjct: 176 GRNLGRVGLVTNRERHPGSLDIVHVKDTAGHTFATRLSNIFVIGRGNKPWVSLLKGKGIH 235
Query: 181 LSI 183
L+I
Sbjct: 236 LTI 238
>gi|339245843|ref|XP_003374555.1| 40S ribosomal protein S4 [Trichinella spiralis]
gi|316972227|gb|EFV55914.1| 40S ribosomal protein S4 [Trichinella spiralis]
Length = 263
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 147/195 (75%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV++I +T E+FRL+YD KGR+ +H I EE+K KLCK
Sbjct: 66 MQRLIKVDGKVRTDLTYPAGFMDVITIDRTGEHFRLIYDVKGRYVVHRISHEESKLKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G K IP I T+DGRTIRYPDPLIKAND+I ++E NKI +F+KFD GNV MVTG
Sbjct: 126 VRKVMVGPKNIPMIITHDGRTIRYPDPLIKANDSIVYNIEKNKIVDFVKFDTGNVCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVGII +RE+H GSF+ +H++D G FATRL +F IGKG P +SLP KGIK
Sbjct: 186 GHNVGRVGIITHRERHPGSFDIVHVRDTTGSTFATRLNYIFVIGKGKDPLISLPSCKGIK 245
Query: 181 LSIIEEARKRQALAT 195
LSI +E KR A T
Sbjct: 246 LSIGDERAKRLAAKT 260
>gi|443916876|gb|ELU37810.1| 40s ribosomal protein s4 [Rhizoctonia solani AG-1 IA]
Length = 331
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 142/182 (78%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYP G+MDV+SI K+ E+FRLLYD KGRF +H I EEA +KL KV
Sbjct: 135 QRLIKVDGKVRTDNTYPTGYMDVISIEKSGEHFRLLYDVKGRFVIHRITPEEATYKLLKV 194
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R G +G+PYI T+DGRTIRYPDP IK NDT+K D+ T KITEF+KFD GN+VM+TGG
Sbjct: 195 RKTAVGARGVPYIVTHDGRTIRYPDPQIKVNDTVKFDITTGKITEFVKFDTGNLVMITGG 254
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H G F+ +H++D L FATR+ N+F IG+G+K W+SLPKGKG KL
Sbjct: 255 RNMGRVGTITHRERHVGGFDIVHVKDVLDRTFATRISNIFVIGEGSKAWISLPKGKGTKL 314
Query: 182 SI 183
+I
Sbjct: 315 TI 316
>gi|223646542|gb|ACN10029.1| 40S ribosomal protein S4 [Salmo salar]
gi|223672389|gb|ACN12376.1| 40S ribosomal protein S4 [Salmo salar]
Length = 213
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 143/178 (80%)
Query: 15 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYI 74
K PAGFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCKV+ G KG+P++
Sbjct: 30 KVVPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHL 89
Query: 75 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNRE 134
T+D RTIRYPDPLIK NDT+++DL T KITE IKFD GN+ MVTGG N GR+GII NRE
Sbjct: 90 VTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRE 149
Query: 135 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
+H GSF+ +H++D+ G+ FATRLGN+F IGKG KPWVSLP+GKGI+L+I EE KR A
Sbjct: 150 RHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIA 207
>gi|198415701|ref|XP_002127921.1| PREDICTED: similar to ribosomal protein S4, X-linked X [Ciona
intestinalis]
Length = 259
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 147/192 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT E FRL+YD KGRF +H I +EAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDTTYPAGFMDVITIDKTAEYFRLIYDVKGRFAVHRITSDEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V KG+PY+ T+D RTIRYP+P IK +DT+ +D+ + KIT F+ D GN+ M+TG
Sbjct: 126 VKKVATAPKGVPYLVTHDARTIRYPNPDIKVHDTVVVDIASGKITGFVHLDSGNMCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG + +RE+H GSF+ IH++DALGH FATRL NVF IG+ KP VSLP+GKGIK
Sbjct: 186 GHNLGRVGTVMHRERHPGSFDIIHVKDALGHTFATRLSNVFIIGQANKPMVSLPRGKGIK 245
Query: 181 LSIIEEARKRQA 192
L+I EE +R A
Sbjct: 246 LTIAEERDRRLA 257
>gi|440791779|gb|ELR13017.1| ribosomal family s4e, putative [Acanthamoeba castellanii str. Neff]
Length = 242
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 151/192 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGF DV++I KT+E FRLLYDTKGRF H I EE+K+KL K
Sbjct: 44 MQRLVKVDGKVRTDPTFPAGFQDVITIEKTDEVFRLLYDTKGRFIAHRISAEESKYKLGK 103
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V+ G+KGIPY+ T+DGRTIRYPDP IK +DT+K+DLET KI + +KF+ GN+ MVT
Sbjct: 104 VRRVEIGKKGIPYLVTHDGRTIRYPDPSIKVHDTVKIDLETGKIVDHVKFEAGNLCMVTA 163
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG++++RE+H GSF+ IH++DA G FATR NVF IG+ TK VSLPK KGIK
Sbjct: 164 GRNIGRVGLMESRERHAGSFDIIHVKDAAGQTFATRGSNVFIIGQTTKSLVSLPKRKGIK 223
Query: 181 LSIIEEARKRQA 192
SII+E + R A
Sbjct: 224 TSIIQEQQHRLA 235
>gi|412985609|emb|CCO19055.1| 40S ribosomal protein S4 [Bathycoccus prasinos]
Length = 276
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 144/190 (75%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD K+R +K YP G MDVV I KT+E+FRL+YD KGRF +H I EA++KLCKV
Sbjct: 85 QRLVKVDGKIRMEKCYPCGIMDVVDIEKTDEHFRLMYDQKGRFVVHRITGIEAQYKLCKV 144
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G KG+P + +D RTIRYPDP+IK D++ +D+ +NKIT+F+KFD G + MVTGG
Sbjct: 145 IKKKLGDKGVPCVQLHDSRTIRYPDPMIKEGDSVMVDIASNKITDFVKFDAGALCMVTGG 204
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGI+ REKHKGSFE +H+ DA G FATR NVF IG G KP VSLPKGKGIKL
Sbjct: 205 RNAGRVGIVNRREKHKGSFEVVHLTDAAGQNFATRFSNVFAIGTGNKPMVSLPKGKGIKL 264
Query: 182 SIIEEARKRQ 191
+I+EE RK++
Sbjct: 265 TILEEQRKQE 274
>gi|95007264|emb|CAJ20484.1| 40s ribosomal protein s4, putative [Toxoplasma gondii RH]
Length = 263
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H IR+EEA +KLC+
Sbjct: 66 MQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL T KI + +KF+ GN+ MVTG
Sbjct: 126 VKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK KGI+
Sbjct: 186 GHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIR 245
Query: 181 LSIIEEARKRQAL 193
LSI+E RQ L
Sbjct: 246 LSIMEN---RQVL 255
>gi|221482770|gb|EEE21101.1| 40S ribosomal protein S4, putative [Toxoplasma gondii GT1]
gi|221503435|gb|EEE29133.1| 40S ribosomal protein S4, putative [Toxoplasma gondii VEG]
Length = 312
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H IR+EEA +KLC+
Sbjct: 115 MQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCR 174
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL T KI + +KF+ GN+ MVTG
Sbjct: 175 VKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTG 234
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK KGI+
Sbjct: 235 GHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIR 294
Query: 181 LSIIEEARKRQAL 193
LSI+E RQ L
Sbjct: 295 LSIMEN---RQVL 304
>gi|237840521|ref|XP_002369558.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
gi|211967222|gb|EEB02418.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
Length = 301
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YPAGFMDV+SI KT ENFR+L+DTKGRF H IR+EEA +KLC+
Sbjct: 104 MQRLIKVDNKVRTDQCYPAGFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCR 163
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+P + T+DGRT+RYP P IKA+D I+LDL T KI + +KF+ GN+ MVTG
Sbjct: 164 VKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTG 223
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +RE+H G F+ IH++DA +EFATR+ NVF IGKG K W+SLPK KGI+
Sbjct: 224 GHNVGRVGVIVHRERHLGGFDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIR 283
Query: 181 LSIIEEARKRQAL 193
LSI+E RQ L
Sbjct: 284 LSIMEN---RQVL 293
>gi|145286314|gb|ABP52061.1| ribosomal protein s4a [Ancylostoma caninum]
Length = 261
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 147/191 (76%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD K+RTD +PAGFMDV+SI +TNE FRLLYD KGR+ +H I E +FKLCKV
Sbjct: 67 QRVIKVDGKIRTDHKFPAGFMDVISIERTNETFRLLYDVKGRYTVHRITAAEGQFKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+++ ++ IPYI T DGRTIRYPDP IK NDT+ +DL +NKIT+++KF+ GN+ M+TGG
Sbjct: 127 KALHVAKQNIPYITTNDGRTIRYPDPHIKVNDTVVIDLSSNKITDYVKFEAGNLAMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG+I +REK G+F+ IH++DA GH FATR+ NVF IGKG K VSLP KGI+L
Sbjct: 187 RNVGRVGVIGHREKLPGAFDIIHVKDAAGHSFATRVSNVFVIGKGNKALVSLPAAKGIRL 246
Query: 182 SIIEEARKRQA 192
+I EE KR A
Sbjct: 247 TIAEERDKRLA 257
>gi|392495106|gb|AFM74216.1| 40S ribosomal protein S4-like protein [Spirometra erinaceieuropaei]
Length = 264
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 144/189 (76%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VRTD+ +PAGFMDV+SI +TNE+FRL+YDTK RF +H I EEAK+KLCK+
Sbjct: 68 QRLVKVDGRVRTDRKFPAGFMDVISIDRTNEHFRLIYDTKKRFAIHRIHPEEAKYKLCKI 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G +PYI T+D RTIRYPDP IK NDT+++D T K+ FIKF+ GNV MVTGG
Sbjct: 128 RKVLTGPGNVPYIVTHDARTIRYPDPEIKVNDTVQIDRATGKVLNFIKFEPGNVCMVTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I E+H GS E +H++D GH+F TRL N+F IGK K WVSLPKGKGI+L
Sbjct: 188 HNLGRVGVITQWERHPGSVEMVHVRDNTGHQFVTRLNNIFIIGKSNKAWVSLPKGKGIRL 247
Query: 182 SIIEEARKR 190
SI+EE +R
Sbjct: 248 SILEERDRR 256
>gi|302505080|ref|XP_003014761.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|302664454|ref|XP_003023857.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|291178067|gb|EFE33858.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
gi|291187875|gb|EFE43239.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
gi|307752099|gb|ADN93070.1| putative 40S ribosomal subunit protein S4 [Arthroderma benhamiae]
Length = 215
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 155/215 (72%), Gaps = 22/215 (10%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 1 MQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 60
Query: 61 VRSVQFGQKGIPYINTYDGRT---------------------IRYPDPLIKANDTIKLDL 99
V+ VQ G+ GIP++ T+D RT IRYPDP I+ NDT+K+D+
Sbjct: 61 VKRVQLGKGGIPFLVTHDARTRWTKVWFDSRRAWSERRWQLNIRYPDPSIRVNDTVKIDI 120
Query: 100 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGN 159
T KIT+F+KFD G + M TGGRN GRVG+I +RE+H G F +HI+DA+ + FATR N
Sbjct: 121 ATGKITDFVKFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESN 180
Query: 160 VFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALA 194
VF IG+ KPWVSLPKGKG+KL+I EE +R+A+A
Sbjct: 181 VFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRAMA 214
>gi|426257601|ref|XP_004022414.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
Length = 266
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 150/201 (74%), Gaps = 3/201 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFR---LLYDTKGRFRLHSIRDEEAKFK 57
MQR + +D KV TD TYPAGFMDV+SI KT ENF+ L+YDTK F ++ I EEAK+K
Sbjct: 66 MQRFIKIDGKVHTDITYPAGFMDVISIDKTGENFQNFCLIYDTKDHFAVYCITPEEAKYK 125
Query: 58 LCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 117
LCKVR + G KGIP++ T+D TI YPDPLIK NDTI++DLET KIT+FIKF GN+ +
Sbjct: 126 LCKVRKIFVGTKGIPHLVTHDAHTIHYPDPLIKVNDTIQIDLETGKITDFIKFGTGNLCI 185
Query: 118 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
VTGG + GR+G+I N+E+H SF+ +H++D G+ FATRL ++F IGKG KPW+SLP GK
Sbjct: 186 VTGGAHLGRIGVITNQERHPDSFDLVHVKDVNGNSFATRLSSIFVIGKGNKPWISLPHGK 245
Query: 178 GIKLSIIEEARKRQALATSAA 198
GI L+I EE KR A S+
Sbjct: 246 GIHLTIAEERDKRLAAKQSSG 266
>gi|302172089|gb|ADK97882.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172095|gb|ADK97885.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172097|gb|ADK97886.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172099|gb|ADK97887.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172101|gb|ADK97888.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172103|gb|ADK97889.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172111|gb|ADK97893.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172113|gb|ADK97894.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172115|gb|ADK97895.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172121|gb|ADK97898.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097681|gb|ADW09575.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097683|gb|ADW09576.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
gi|320097685|gb|ADW09577.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097687|gb|ADW09578.1| putative 40S ribosomal protein S4-like protein [Schiedea
membranacea]
gi|320097689|gb|ADW09579.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097693|gb|ADW09581.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097697|gb|ADW09583.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097701|gb|ADW09585.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097705|gb|ADW09587.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097707|gb|ADW09588.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097717|gb|ADW09593.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097719|gb|ADW09594.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097721|gb|ADW09595.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097723|gb|ADW09596.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097725|gb|ADW09597.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097727|gb|ADW09598.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097729|gb|ADW09599.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097731|gb|ADW09600.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097733|gb|ADW09601.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097735|gb|ADW09602.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097737|gb|ADW09603.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097739|gb|ADW09604.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097741|gb|ADW09605.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097743|gb|ADW09606.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097745|gb|ADW09607.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097747|gb|ADW09608.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097749|gb|ADW09609.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097751|gb|ADW09610.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097753|gb|ADW09611.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097757|gb|ADW09613.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097761|gb|ADW09615.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097781|gb|ADW09625.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 127/132 (96%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGT+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 176 GKGIKLSIIEEA 187
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|326918854|ref|XP_003205701.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
Length = 182
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 142/176 (80%)
Query: 23 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 82
DV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 7 DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 66
Query: 83 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 142
RYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 67 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 126
Query: 143 IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 198
+H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A S+
Sbjct: 127 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG 182
>gi|158286707|ref|XP_308886.4| AGAP006871-PA [Anopheles gambiae str. PEST]
gi|157020596|gb|EAA04244.5| AGAP006871-PA [Anopheles gambiae str. PEST]
Length = 262
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 149/198 (75%), Gaps = 2/198 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV +D KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KL K
Sbjct: 66 MQRHVKIDGKVRTDPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +P++ T+DGRTIRYPDP I +D+I+ D+ T K+ + +KF+ GN+ M+TG
Sbjct: 126 VKRVQIGPKRVPFLLTHDGRTIRYPDPQIHQHDSIQYDIATGKVLDVLKFEPGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR G + REKH GSFE +H++D GH FATRL NVF IGK TK ++SLPKGKG+K
Sbjct: 186 GRNLGRCGTVILREKHPGSFEIVHVKDTTGHVFATRLSNVFIIGKSTKAYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE +R LA AA
Sbjct: 246 LTIAEERDRR--LANKAA 261
>gi|326432455|gb|EGD78025.1| ribosomal protein s4 X isoform [Salpingoeca sp. ATCC 50818]
Length = 263
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 148/190 (77%), Gaps = 1/190 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R++ VD KVRTD TYPAGFMDV+SIPKTNENFRLLYD KGR+ +H I D EAK+KLCKV
Sbjct: 67 ERNIKVDGKVRTDMTYPAGFMDVISIPKTNENFRLLYDAKGRYTVHRIDDAEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G +G+P + T+D RTIRYPDP IK +D++K+DLET +ITEF+KFD + M+TGG
Sbjct: 127 TKTFVGPRGVPMVVTHDARTIRYPDPHIKVHDSVKVDLETGRITEFVKFDNNMLAMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +R++H G F+ + ++DA GH+FATRL N+F IG KP VSLPKGKG+KL
Sbjct: 187 RNMGRVGTIVHRDRHLGGFDIVTLRDANGHQFATRLSNIFVIGD-KKPLVSLPKGKGVKL 245
Query: 182 SIIEEARKRQ 191
+I EE +R
Sbjct: 246 TIAEERDRRM 255
>gi|167526949|ref|XP_001747807.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773556|gb|EDQ87194.1| predicted protein [Monosiga brevicollis MX1]
Length = 264
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 149/198 (75%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD K RTD T+P G MDV+SIP TNE+FRLL+DTKGR+ +H I+D+EA FKLCKV
Sbjct: 67 QRKVYVDGKARTDLTFPTGLMDVISIPDTNEHFRLLFDTKGRYTVHKIQDDEASFKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G +PY+ T+DGRTIRYPDP IK NDT+K+DL++ +IT+FIKFD+G +V+ TGG
Sbjct: 127 KQAAIGPNAVPYVVTHDGRTIRYPDPHIKVNDTVKVDLDSGRITDFIKFDIGVLVLCTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG + +R+K G+ + +H++D+ G +F T L NVF +G G KP +SLP+GKG++L
Sbjct: 187 RNMGRVGTLMSRDKMMGATDVVHVRDSAGQQFTTLLSNVFAVGSGKKPAISLPRGKGVRL 246
Query: 182 SIIEEARKRQALATSAAA 199
+I EE +R AAA
Sbjct: 247 TIAEERDRRLKDKAKAAA 264
>gi|302172081|gb|ADK97878.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172083|gb|ADK97879.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172085|gb|ADK97880.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172087|gb|ADK97881.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172105|gb|ADK97890.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172107|gb|ADK97891.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172109|gb|ADK97892.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172127|gb|ADK97901.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172129|gb|ADK97902.1| 40S ribosomal protein S4-like protein [Schiedea adamantis]
Length = 132
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 126/132 (95%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLXTQKIEDFVKFDVGNV 60
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGT+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 176 GKGIKLSIIEEA 187
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|225713724|gb|ACO12708.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 260
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 146/189 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD +VR D +PAGFMDV+ I +TNENFRL+YD KGRF +H I +EAK+KLC+V
Sbjct: 67 QRLVKVDGRVRMDPRFPAGFMDVIQIERTNENFRLIYDVKGRFTVHRITAQEAKYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
++V+ G K +PY+ T DGRTIRYPDP+I+ ND+I+LD+ T K + +KFD GN+ MVTGG
Sbjct: 127 KAVKTGPKNVPYLYTSDGRTIRYPDPVIRVNDSIRLDINTGKTMDSVKFDTGNLCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +H++D+ GH FATRL F IGK KP++SLPKG GIKL
Sbjct: 187 RNTGRVGAIMHRERHPGSFDIVHVKDSNGHTFATRLDYTFVIGKDNKPYISLPKGGGIKL 246
Query: 182 SIIEEARKR 190
+I EE KR
Sbjct: 247 TIAEERDKR 255
>gi|320097679|gb|ADW09574.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 127/132 (96%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 176 GKGIKLSIIEEA 187
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|300121745|emb|CBK22320.2| unnamed protein product [Blastocystis hominis]
gi|300124038|emb|CBK25309.2| unnamed protein product [Blastocystis hominis]
gi|300175830|emb|CBK21826.2| unnamed protein product [Blastocystis hominis]
Length = 194
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 148/191 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD K+RTD T+PAGFMDVV++ +++ FRLLYD KGRF LH I + EA++KLCK
Sbjct: 1 MQRLVKVDGKIRTDSTFPAGFMDVVTLEGSSDRFRLLYDVKGRFVLHRIDENEAQYKLCK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V Q K IP+I T+D RTIR+PDP +K NDT+K+DL+TNK+ +KF+VGN+ +T
Sbjct: 61 VVKRQLSSKKIPFIVTHDARTIRFPDPTVKVNDTVKVDLKTNKVIGHVKFEVGNLCFITK 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +R++H GSF+ +H++DA GHEFATRL NVF IG+G +P VSLPKG G+K
Sbjct: 121 GHNIGRVGVIVHRDRHFGSFDIVHVRDAAGHEFATRLSNVFIIGEGNQPMVSLPKGNGVK 180
Query: 181 LSIIEEARKRQ 191
LSIIEE R+
Sbjct: 181 LSIIEEKEMRE 191
>gi|320097677|gb|ADW09573.1| putative 40S ribosomal protein S4-like protein [Schiedea
stellarioides]
Length = 132
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 127/132 (96%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDATGHEFATRQGNVFIVGKGSRPWVSLPK 120
Query: 176 GKGIKLSIIEEA 187
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|330789883|ref|XP_003283028.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
gi|325087100|gb|EGC40481.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
Length = 267
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 144/186 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD YPAGFMDV++I KT ENFRLLYD KGRF L I EEAKFKL +
Sbjct: 66 MQRLVKVDGKVRTDPNYPAGFMDVITIDKTKENFRLLYDPKGRFTLQRITPEEAKFKLAR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ G +GIPY++T DGRTIRYPDP IK +DT+K+D+E+ KIT FI FD+ N+ M+ G
Sbjct: 126 VVKVESGNQGIPYVHTDDGRTIRYPDPAIKIHDTVKIDIESGKITAFIPFDINNLCMIVG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG I NRE+H GSF+ +HI D+ G++FATRL NVF IGK ++ +VSLP GKG++
Sbjct: 186 GHNLGRVGAINNRERHAGSFDIVHITDSAGNQFATRLSNVFVIGKSSQTFVSLPAGKGVR 245
Query: 181 LSIIEE 186
S I+E
Sbjct: 246 RSRIDE 251
>gi|126697462|gb|ABO26688.1| ribosomal protein S4 [Haliotis discus discus]
Length = 242
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD +VRTDK +P GFMDVV+I KT+ENFR+LYD KGRF +H I+ EEAK+KLC+V
Sbjct: 68 QRLIKVDGRVRTDKNFPTGFMDVVTIEKTSENFRVLYDVKGRFIVHRIKPEEAKYKLCRV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V G KG+PY+ T DGRTIRYPDP++K NDTI +D+ T K+ +++KF+ GN+ +TGG
Sbjct: 128 RGVATGPKGVPYLTTNDGRTIRYPDPVVKVNDTIMVDIATGKMKDYVKFESGNLCTITGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
N GRVG+I NREKH GSF+ +H++D+LGH FATR+ VF IGKG KPW+SLP+G
Sbjct: 188 HNLGRVGVIINREKHPGSFDIVHVKDSLGHTFATRMSYVFVIGKGNKPWISLPRG 242
>gi|302172091|gb|ADK97883.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172093|gb|ADK97884.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172117|gb|ADK97896.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172119|gb|ADK97897.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172123|gb|ADK97899.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|302172125|gb|ADK97900.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097691|gb|ADW09580.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097695|gb|ADW09582.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097699|gb|ADW09584.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097703|gb|ADW09586.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097709|gb|ADW09589.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097711|gb|ADW09590.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097713|gb|ADW09591.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097715|gb|ADW09592.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097755|gb|ADW09612.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097759|gb|ADW09614.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097763|gb|ADW09616.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097765|gb|ADW09617.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097767|gb|ADW09618.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097769|gb|ADW09619.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097771|gb|ADW09620.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097773|gb|ADW09621.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097775|gb|ADW09622.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097777|gb|ADW09623.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097779|gb|ADW09624.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
gi|320097783|gb|ADW09626.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
Length = 132
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 126/132 (95%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L T KI +F+KFDVGNV
Sbjct: 1 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLYTQKIEDFVKFDVGNV 60
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGT+PWVSLPK
Sbjct: 61 VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120
Query: 176 GKGIKLSIIEEA 187
GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132
>gi|403308090|ref|XP_003944510.1| PREDICTED: 40S ribosomal protein S4, X isoform [Saimiri boliviensis
boliviensis]
Length = 360
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 139/176 (78%)
Query: 25 VSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 84
+SI KT ENFRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D RTIRY
Sbjct: 70 ISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRY 129
Query: 85 PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIH 144
PDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GSF +H
Sbjct: 130 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFNVVH 189
Query: 145 IQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 200
++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A S +
Sbjct: 190 VKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSRVCE 245
>gi|298707012|emb|CBJ29820.1| 40S ribosomal protein S4 [Ectocarpus siliculosus]
Length = 262
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 147/186 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ + VD KVRTD +PAGFMDVV I K+ + FRLLY+TKGRF LH I +EE+KFKLC+
Sbjct: 66 MQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ + IPY+ T+DGRTIRYPDPLIK NDTIK+DLET K + IKF++GNV M+
Sbjct: 126 VNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIAR 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVGI+++ E+H GSF+ + ++D GH FATRL N+FT+G GT+ VSLPKGKG+K
Sbjct: 186 GRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRAMVSLPKGKGVK 245
Query: 181 LSIIEE 186
L+I+EE
Sbjct: 246 LTILEE 251
>gi|430812711|emb|CCJ29887.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 259
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 150/212 (70%), Gaps = 16/212 (7%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV+SI +T ENFRL+YDTKGR+ +H I EA +KLCK
Sbjct: 48 MQRLVKVDGKVRTDHTYPAGFMDVISIERTGENFRLVYDTKGRYMIHRITSMEATYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTI----------------RYPDPLIKANDTIKLDLETNKI 104
++ VQ G K IPY T+DGRTI RYP+P I ANDT+K DL +NKI
Sbjct: 108 IKKVQLGPKAIPYAVTHDGRTIVCIDQMLLIFLISFLQRYPNPDIHANDTVKFDLVSNKI 167
Query: 105 TEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
I F+VG + MVTGGR++GRVG+I +RE H G F+ +HI+D+L H FATRL NVF IG
Sbjct: 168 DGHIPFEVGKLAMVTGGRSKGRVGLIIDREHHNGGFDIVHIKDSLDHTFATRLSNVFVIG 227
Query: 165 KGTKPWVSLPKGKGIKLSIIEEARKRQALATS 196
+ PW+SLPKGKG+KL+I EE +R+ L +
Sbjct: 228 DISGPWISLPKGKGLKLTISEERDRRRNLQNA 259
>gi|359496057|ref|XP_003635141.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
[Vitis vinifera]
Length = 205
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/139 (83%), Positives = 128/139 (92%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV VD KVR DKTYP+GFMDVVSIPK N+NFRLLYDTKGRF LH +R+EEAKFKL K
Sbjct: 66 MQQHVFVDGKVRIDKTYPSGFMDVVSIPKKNKNFRLLYDTKGRFXLHLVRNEEAKFKLWK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V SVQ GQKGIPY+NTYD RTIRYP+PLIKANDT KLDL++NKIT+FIKFDVGNVVMVTG
Sbjct: 126 VXSVQLGQKGIPYLNTYDERTIRYPNPLIKANDTTKLDLKSNKITDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGS 139
GRNRGRVG+IKNREKHKG+
Sbjct: 186 GRNRGRVGVIKNREKHKGN 204
>gi|351700252|gb|EHB03171.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 258
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 148/198 (74%), Gaps = 5/198 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M R + +D KVRT+ TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEA++KLCK
Sbjct: 66 MHRFIKIDGKVRTEITYPAGFMDVISIDKTGENFRLIYDTKGRFAIHRITPEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++ L+T KIT + N+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIHLDTGKIT-----NTSNLCMVTG 180
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N G +G+I N E+H GSF+ +H++D G+ FAT L N+F IGKG KPW+SLP+GKGI+
Sbjct: 181 GANLGGIGVITNGERHPGSFDVVHVKDTNGNSFATWLSNIFLIGKGNKPWISLPRGKGIR 240
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 241 LTIAEERDKRLAAKQSSG 258
>gi|444515837|gb|ELV10992.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 376
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 110/161 (68%), Positives = 135/161 (83%)
Query: 23 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 82
DV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCKVR + G KGIP++ T+D RTI
Sbjct: 173 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 232
Query: 83 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 142
RYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 233 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 292
Query: 143 IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
+H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I
Sbjct: 293 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 333
>gi|58259587|ref|XP_567206.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107185|ref|XP_777723.1| 40S ribosomal protein S4 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321249797|ref|XP_003191577.1| hypothetical protein CGB_A6670W [Cryptococcus gattii WM276]
gi|50260419|gb|EAL23076.1| hypothetical protein CNBA6010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223343|gb|AAW41387.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458044|gb|ADV19790.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
gi|405117993|gb|AFR92768.1| 40s ribosomal protein [Cryptococcus neoformans var. grubii H99]
Length = 263
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 142/182 (78%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD+T+PAGFMDV+SI ++ E+FRLLYD KGRF +H I EEA FKL KV
Sbjct: 67 QRLIKVDGKVRTDETFPAGFMDVISIERSGEHFRLLYDVKGRFTIHRITPEEATFKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R Q G KG+P+I T+DGRTIRYPDP IK NDT+K D NKI + IKF+ GNVVMVTGG
Sbjct: 127 RKHQLGAKGVPHIVTHDGRTIRYPDPAIKVNDTVKFDFVQNKIVDHIKFEPGNVVMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I ++E+H G F+ +H++D L FATRL N+F IG+G+K VSLPKGKG+KL
Sbjct: 187 RNMGRSGVIVHKERHLGGFDIVHVKDVLDRTFATRLSNIFVIGEGSKAQVSLPKGKGVKL 246
Query: 182 SI 183
SI
Sbjct: 247 SI 248
>gi|119592222|gb|EAW71816.1| ribosomal protein S4, X-linked, isoform CRA_b [Homo sapiens]
Length = 231
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 136/165 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 230
>gi|354683887|gb|AER35072.1| 40S ribosomal protein S4 [Dictyostelium lacteum]
Length = 267
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 142/186 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTD +PAGFMDVV I +T E+FRLLYD KGRF L I EEAKFKL +
Sbjct: 66 MQRHLRVDGKVRTDPNFPAGFMDVVQIKETKEDFRLLYDPKGRFTLQRITPEEAKFKLAR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ G +GIPY++T DGRTIRYPDP IK +DT+K+D+ + KIT FI F+V N+ M+ G
Sbjct: 126 VTKVETGNQGIPYVHTDDGRTIRYPDPSIKIHDTVKIDIASGKITSFIPFEVNNLCMIVG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +REKH GSF+ +HI D++GH+FATRL NVF IGK VSLP GKG++
Sbjct: 186 GHNLGRVGVITSREKHPGSFDIVHITDSVGHQFATRLSNVFVIGKANHTLVSLPAGKGVR 245
Query: 181 LSIIEE 186
S I+E
Sbjct: 246 RSRIDE 251
>gi|66823117|ref|XP_644913.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
gi|6226700|sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4
gi|3647233|gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum]
gi|60473102|gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
Length = 267
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 142/186 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD YPAGFMDV+SI KT ENFRLL+D KGRF L I EEAKFKL +
Sbjct: 66 MQRLVKVDGKVRTDPNYPAGFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAKFKLAR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ G +GIPY++T DGRTIRYPDP I +DTIK+D+E+ KIT FI F+V N+ M+ G
Sbjct: 126 VTRVETGNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG + +REKH GSF+ +H+ D GH+FATRL NVF IGK ++ +VSLP GKG++
Sbjct: 186 GHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVR 245
Query: 181 LSIIEE 186
S ++E
Sbjct: 246 RSRVDE 251
>gi|343429529|emb|CBQ73102.1| probable ribosomal protein S4.e, cytosolic [Sporisorium reilianum
SRZ2]
Length = 264
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 146/195 (74%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H I EEA +KL KV
Sbjct: 67 QRLIKIDGKVRTDPTYPTGFQDVVSIDKSGEHFRILYDVKGRFIVHRITAEEATYKLLKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G +G+P+I T+DGRTIRYPDP IK NDT++ D+E+ KI +F+ FD G VMVTGG
Sbjct: 127 KKVQLGARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIESQKILDFVAFDTGATVMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN+GR G+I RE+H G F+ +HI+D LG +F+TRL NVF IG KP +S+P+G G+KL
Sbjct: 187 RNQGRAGVITGRERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGADGKPMISMPRGGGVKL 246
Query: 182 SIIEE--ARKRQALA 194
+I EE R+RQ A
Sbjct: 247 TITEERDQRRRQKEA 261
>gi|47197900|emb|CAF89133.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 141/176 (80%)
Query: 23 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 82
DV+SI KT E+FRL+YD KGRF +H I EEAK+KLCKV+ + G KGIP++ T+D RTI
Sbjct: 1 DVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTI 60
Query: 83 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 142
RYPDPLIK NDT+++DLE+ KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 61 RYPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDV 120
Query: 143 IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 198
+H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE KR A +++
Sbjct: 121 VHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQASS 176
>gi|358340045|dbj|GAA33707.2| small subunit ribosomal protein S4e [Clonorchis sinensis]
Length = 285
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/196 (59%), Positives = 143/196 (72%), Gaps = 12/196 (6%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q+ + VD KVRTDK YPAGFMDV++I KTNE+FRL+YDTKGRF +H I EEAK+KLCKV
Sbjct: 77 QKLIKVDGKVRTDKKYPAGFMDVITIEKTNEHFRLVYDTKGRFAIHRIHPEEAKYKLCKV 136
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDV--------- 112
R V G+PY+ T+D RTIRYPDP IK NDTI++D+ T K+ IKFD
Sbjct: 137 RKVLTASGGVPYLVTHDARTIRYPDPNIKPNDTIQVDIATGKVLNHIKFDPGLFLFIIFY 196
Query: 113 ---GNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 169
GN+ M+TGGRN GRVG I E+H GS E +H++D+ GH+F TRL NVF IGK K
Sbjct: 197 YDQGNICMITGGRNLGRVGTITQWERHPGSVEMVHVRDSTGHQFLTRLNNVFIIGKSNKA 256
Query: 170 WVSLPKGKGIKLSIIE 185
W+SLPKGKG++LSIIE
Sbjct: 257 WISLPKGKGVRLSIIE 272
>gi|312077176|ref|XP_003141188.1| 40S ribosomal protein S4 [Loa loa]
gi|307763646|gb|EFO22880.1| 40S ribosomal protein S4 [Loa loa]
Length = 263
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 147/197 (74%), Gaps = 1/197 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +PAGFMDV+ I +TNE FRLLYD KGR+ H I ++E FKLCK+
Sbjct: 67 QRLIKVDGKVRTDMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGNFKLCKI 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++KFD GN+ MVTGG
Sbjct: 127 VKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNLCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP-KGKGIK 180
RN GRVGI+ +REKH GSF+ +HI+DA GH FATRL NVF IGKGTK VSLP KG++
Sbjct: 187 RNMGRVGIVGHREKHPGSFDIVHIKDAAGHSFATRLNNVFIIGKGTKSMVSLPGPTKGVR 246
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R A +A
Sbjct: 247 LTIAEERDRRLAQKRAA 263
>gi|324523515|gb|ADY48258.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 263
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 147/197 (74%), Gaps = 1/197 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRT+ +PAGFMDV++I KTNE FRLLYD KGR+ +H I + E +FKLCKV
Sbjct: 67 QRLIKIDGKVRTEMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGRFKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G KG+P+I T+D RTIRYPDP +K NDTI LD+ + K +++KFD GN+ MVTGG
Sbjct: 127 VKKSVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNLCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG-KGIK 180
RN GRVG++ +REKH GSF+ +H++DA GH FATRL NVF IGKGTK VSLP KG++
Sbjct: 187 RNMGRVGVVGHREKHPGSFDIVHVKDAAGHTFATRLNNVFIIGKGTKSLVSLPGATKGVR 246
Query: 181 LSIIEEARKRQALATSA 197
L+I EE KR A +A
Sbjct: 247 LTIAEERDKRLAQKKAA 263
>gi|443894390|dbj|GAC71738.1| uncharacterized conserved protein [Pseudozyma antarctica T-34]
Length = 315
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 145/195 (74%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H I EEA +KL KV
Sbjct: 118 QRLIKVDGKVRTDPTYPTGFQDVVSIEKSGEHFRILYDAKGRFIVHRITAEEATYKLLKV 177
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G +G+P++ T+DGRTIRYPDP IK NDT++ D+E+ KI +F+ FD G VMVTGG
Sbjct: 178 KKVQLGARGVPHVVTHDGRTIRYPDPAIKVNDTVRFDIESQKILDFVTFDTGATVMVTGG 237
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G+I +E+H G F+ +HI+D LG +F+TRL NVF IG KP +S+P+G G+KL
Sbjct: 238 RNMGRAGVITGKERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGTDGKPMISMPRGGGVKL 297
Query: 182 SIIEE--ARKRQALA 194
+I EE R+RQ A
Sbjct: 298 TITEERDQRRRQKEA 312
>gi|388583766|gb|EIM24067.1| 40S ribosomal protein S4, partial [Wallemia sebi CBS 633.66]
Length = 260
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 149/196 (76%), Gaps = 3/196 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V +D K RTD+TYP GF DV+SI + E+FR+LYD KGRF +H I DEEA+FKL KV
Sbjct: 65 QRLVKIDGKARTDRTYPTGFQDVISIEASGEHFRILYDVKGRFTIHRITDEEAQFKLLKV 124
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G +G+P+I T+DGRTIRYPDPLIK NDT+K DL NKI +F+KF+ GNVVM TGG
Sbjct: 125 KKQAIGARGVPFIVTHDGRTIRYPDPLIKVNDTVKFDLINNKIVDFVKFETGNVVMATGG 184
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN+GR+G I RE+H G ++ ++I+D L +FATRL NVF +G+ K WVSLPKG G+KL
Sbjct: 185 RNQGRIGTIIGRERHLGGYDIVNIKDPLDRQFATRLTNVFVVGQ-QKSWVSLPKGGGVKL 243
Query: 182 SIIEE--ARKRQALAT 195
+I EE R+R+A A+
Sbjct: 244 TITEERDMRRRRAQAS 259
>gi|388853330|emb|CCF52950.1| probable ribosomal protein S4.e, cytosolic [Ustilago hordei]
Length = 246
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 146/195 (74%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H I EEA +KL KV
Sbjct: 49 QRLIKIDGKVRTDPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEATYKLLKV 108
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G +G+P+I T+DGRTIRYPDP IK NDT++ D+++ KI +F+ FD G VMVTGG
Sbjct: 109 KKVQLGARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGG 168
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN+GR G+I +E+H G F+ +HI+D LG +F+TRLGNVF IG KP +S+P+G G+ L
Sbjct: 169 RNQGRAGVIVGKERHLGGFDIVHIRDVLGRDFSTRLGNVFVIGSEGKPMISMPRGGGVAL 228
Query: 182 SIIEE--ARKRQALA 194
+I EE R+RQ A
Sbjct: 229 TITEERDQRRRQKEA 243
>gi|71015994|ref|XP_758861.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
gi|46098379|gb|EAK83612.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
Length = 386
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 146/195 (74%), Gaps = 2/195 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H I EEA +KL KV
Sbjct: 189 QRLIKIDGKVRTDPTYPTGFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEATYKLLKV 248
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G +G+P+I T+DGRTIRYPDP IK NDT++ D+++ KI +F+ FD G VMVTGG
Sbjct: 249 KKVQLGARGVPHIVTHDGRTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGG 308
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN+GR G+I +E+H G F+ +HI+D LG +F+TRL NVF IG KP +S+P+G G+KL
Sbjct: 309 RNQGRAGVITGKERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGTDGKPMISMPRGGGVKL 368
Query: 182 SIIEE--ARKRQALA 194
+I EE R+RQ A
Sbjct: 369 TITEERDQRRRQKEA 383
>gi|432097049|gb|ELK27547.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 287
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 135/166 (81%)
Query: 27 IPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 86
I KT ENFRL+YDTKGRF +H IR EEAK+KLCKVR + G KGIP++ T+D RTI YPD
Sbjct: 116 IDKTGENFRLVYDTKGRFAVHRIRPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTICYPD 175
Query: 87 PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 146
PLIK NDTI++DLE+ KIT+FIKFD GN+ M+TGG N GR+G+I NREKH GSF+ +H++
Sbjct: 176 PLIKVNDTIQIDLESGKITDFIKFDTGNLCMITGGANLGRIGVITNREKHPGSFDVVHVK 235
Query: 147 DALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
D G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE KR A
Sbjct: 236 DTTGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLA 281
>gi|47196669|emb|CAF89132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 140/175 (80%)
Query: 24 VVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 83
V+SI KT E+FRL+YD KGRF +H I EEAK+KLCKV+ + G KGIP++ T+D RTIR
Sbjct: 1 VISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIR 60
Query: 84 YPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 143
YPDPLIK NDT+++DLE+ KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +
Sbjct: 61 YPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDVV 120
Query: 144 HIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 198
H++D G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE KR A +++
Sbjct: 121 HVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQASS 175
>gi|164656677|ref|XP_001729466.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
gi|159103357|gb|EDP42252.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
Length = 287
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 142/185 (76%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD T+P GFMDVVSI K+ E+FR+LYD KGRF +H I EEA++KL KV
Sbjct: 92 QRIIKVDNKVRTDPTFPTGFMDVVSIEKSGEHFRILYDVKGRFVVHRITAEEAQYKLLKV 151
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P I T+DGRT+RYPDPL++ANDT+K DL NK+ +FIKFD G VM+TGG
Sbjct: 152 KRVQLGAKGVPLIVTHDGRTLRYPDPLVRANDTVKFDLINNKMVDFIKFDTGAQVMITGG 211
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR G + +RE+H G F+ +H++D G EF+TRL NVF IG K W+S+P+G G+KL
Sbjct: 212 RNVGRAGQMIHRERHHGGFDIVHVRDPAGREFSTRLSNVFVIGDHEKRWISMPRGGGVKL 271
Query: 182 SIIEE 186
+I EE
Sbjct: 272 TITEE 276
>gi|328859105|gb|EGG08215.1| hypothetical protein MELLADRAFT_42942 [Melampsora larici-populina
98AG31]
Length = 265
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 142/185 (76%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +P GFMDVVSI K+ ENFR+LYD KGRF +H I EEA +KLCKV
Sbjct: 68 QRLIKVDNKVRTDPKFPTGFMDVVSIEKSGENFRVLYDVKGRFTIHRISAEEAAYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P++ T+DGRTIRYPDP+IK NDTI+ DLE NKI ++I F+ G++VM TGG
Sbjct: 128 KRVQLGAKGVPFLVTHDGRTIRYPDPIIKVNDTIRFDLENNKIVDYIPFEAGSLVMCTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN+GRVG I +REKH G ++ +H++D L F+TR+GN+ IG K +SLP+G G+KL
Sbjct: 188 RNQGRVGTIVHREKHIGGYDIVHVRDVLDRAFSTRIGNIQVIGTHGKAGISLPRGGGVKL 247
Query: 182 SIIEE 186
SI EE
Sbjct: 248 SIAEE 252
>gi|345324726|ref|XP_001510806.2| PREDICTED: 40S ribosomal protein S4-like, partial [Ornithorhynchus
anatinus]
Length = 279
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 136/165 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 115 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 174
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T++ RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTG
Sbjct: 175 VRKIFVGTKGIPHLVTHEARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTG 234
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGK
Sbjct: 235 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGK 279
>gi|189484049|gb|ACE00318.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 212
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 144/191 (75%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV
Sbjct: 19 QRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKV 78
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+F+KF+ GN+ VTGG
Sbjct: 79 KSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAYVTGG 138
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII +RE+ G+F+ IHI+DA GH FATR+ NVF IGKG K VSLP G G++L
Sbjct: 139 RNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGGGVRL 198
Query: 182 SIIEEARKRQA 192
+I EE KR A
Sbjct: 199 TIAEERDKRMA 209
>gi|281206604|gb|EFA80790.1| 40S ribosomal protein S4 [Polysphondylium pallidum PN500]
Length = 284
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 144/186 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V ++ VRTD +P GFMDVVSI KTNENFRLL+DTKGRF+L I+ EAKF L K
Sbjct: 83 MQRLVKINGVVRTDVNFPVGFMDVVSIEKTNENFRLLFDTKGRFQLQRIQPNEAKFILTK 142
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ G +GIPY++T +G T RYPDP IK +DT+K+DLET+KI F+ F++ N+ M+TG
Sbjct: 143 VTKVETGLQGIPYLHTDNGHTYRYPDPAIKIHDTVKIDLETSKIVSFVPFELNNLCMITG 202
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H+ D++GH FATRL NVF IGKG+ +VSL GKG+K
Sbjct: 203 GHNLGRVGVITNRERHLGSFDIVHVTDSVGHSFATRLSNVFIIGKGSTTFVSLLAGKGVK 262
Query: 181 LSIIEE 186
S+I+E
Sbjct: 263 KSLIDE 268
>gi|222088017|gb|ACM41869.1| 40S ribosomal protein S4 [Epinephelus coioides]
Length = 173
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 136/167 (81%)
Query: 26 SIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 85
SI KT E+FRL+YD KGRF +H I EEAK+KLCKV+ + G KGIP++ T+D RTIRYP
Sbjct: 1 SIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIRYP 60
Query: 86 DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
DPLIK NDTI++DL+T KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 61 DPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV 120
Query: 146 QDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
+D+ G+ FATRL N+F IGKG KPWVSLP+GKGI+L+I EE KR A
Sbjct: 121 KDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLA 167
>gi|170574390|ref|XP_001892793.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601467|gb|EDP38373.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 201
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H I ++E KLCK+
Sbjct: 5 QRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKI 64
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++KFD GN+ MVTGG
Sbjct: 65 VKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGG 124
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP-KGKGIK 180
RN GRVGI+ +REKH GSF+ +HI+DA H FATRL NVF IGKGTK VSLP KG++
Sbjct: 125 RNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVR 184
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R A +A
Sbjct: 185 LTIAEERDRRLAQKRAA 201
>gi|341888765|gb|EGT44700.1| CBN-RPS-4 protein [Caenorhabditis brenneri]
gi|341900288|gb|EGT56223.1| hypothetical protein CAEBREN_12475 [Caenorhabditis brenneri]
Length = 259
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 144/191 (75%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV
Sbjct: 66 QRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+F+KF+ GN+ VTGG
Sbjct: 126 KSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAYVTGG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII +RE+ G+F+ IHI+DA GH FATR+ NVF IGKG K VSLP G G++L
Sbjct: 186 RNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGGGVRL 245
Query: 182 SIIEEARKRQA 192
+I EE KR A
Sbjct: 246 TIAEERDKRMA 256
>gi|170574388|ref|XP_001892792.1| 40S ribosomal protein S4 [Brugia malayi]
gi|158601466|gb|EDP38372.1| 40S ribosomal protein S4, putative [Brugia malayi]
Length = 263
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H I ++E KLCK+
Sbjct: 67 QRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKI 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++KFD GN+ MVTGG
Sbjct: 127 VKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP-KGKGIK 180
RN GRVGI+ +REKH GSF+ +HI+DA H FATRL NVF IGKGTK VSLP KG++
Sbjct: 187 RNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVR 246
Query: 181 LSIIEEARKRQALATSA 197
L+I EE +R A +A
Sbjct: 247 LTIAEERDRRLAQKRAA 263
>gi|331216263|ref|XP_003320811.1| 40S ribosomal protein S4 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299801|gb|EFP76392.1| 40S ribosomal protein S4-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 145/190 (76%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD +P GFMDV+SI K+ E+FR+++D KGRF +H I EEA +KLCKV
Sbjct: 68 QRLIKIDNKVRTDPKFPTGFMDVISIEKSGEHFRVMFDIKGRFTVHRISAEEATYKLCKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P+I T+DGRTIRYPDP+IK NDTIK DL NKI + + F+VGN+VM TGG
Sbjct: 128 KRVQLGNKGVPFIVTHDGRTIRYPDPIIKVNDTIKFDLVQNKIVDTLPFEVGNLVMCTGG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN+GRVG I +REKH G ++ +H++D + F+TR+GNV IG KP VSLP+G G+KL
Sbjct: 188 RNQGRVGTILSREKHVGGYDIVHVRDVIDRTFSTRIGNVQVIGAHGKPSVSLPRGGGVKL 247
Query: 182 SIIEEARKRQ 191
+I EE +R+
Sbjct: 248 TIAEERDQRR 257
>gi|290983375|ref|XP_002674404.1| predicted protein [Naegleria gruberi]
gi|284087994|gb|EFC41660.1| predicted protein [Naegleria gruberi]
Length = 274
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 145/193 (75%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD VRTDK+YP+GF DV+SI KTNE+FRLL+DTKGRF +H I + EA +KLCKV
Sbjct: 67 QRLVKVDGLVRTDKSYPSGFNDVISIDKTNEHFRLLFDTKGRFVIHPISEREANYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+G+PYI T DGR IR+PDP IK NDT+K+D+ET K+T+ + F+ GN+ MVTGG
Sbjct: 127 TKRGTATQGVPYIQTNDGRLIRFPDPSIKVNDTVKVDIETGKVTKSVHFESGNLCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N+GR+G I NRE H GSFE +H++D G+ F TR NVF +G+G ++LPKGKG+KL
Sbjct: 187 HNQGRIGEIVNRELHPGSFEIVHVKDIAGNNFTTRANNVFVLGQGHSSMITLPKGKGLKL 246
Query: 182 SIIEEARKRQALA 194
+++E+ +K+ LA
Sbjct: 247 NVVEDRKKQMRLA 259
>gi|268535888|ref|XP_002633079.1| C. briggsae CBR-RPS-4 protein [Caenorhabditis briggsae]
Length = 259
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 143/191 (74%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV
Sbjct: 66 QRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFKLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+F+KF+ GN+ VTGG
Sbjct: 126 KSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAYVTGG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR+GII +RE+ G+ + IHI+DA GH FATR+ NVF IGKG K VSLP G G++L
Sbjct: 186 RNVGRIGIIGHRERLPGASDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGNGVRL 245
Query: 182 SIIEEARKRQA 192
SI EE KR A
Sbjct: 246 SIAEERDKRIA 256
>gi|444721070|gb|ELW61824.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 252
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 142/189 (75%), Gaps = 5/189 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+Y +H I +EA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDTTYPAGFMDVISIDKTRENFRLIY-----VAVHRITPQEAQYKLCK 120
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KG P++ T+D TI YPDPLIK NDTI++D+ET K ++FI+FD GN+ MVTG
Sbjct: 121 VRKIFEGTKGTPHLVTHDAHTICYPDPLIKVNDTIQIDVETGKSSDFIEFDTGNLCMVTG 180
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GS + +H++DA + FATRL N+F IGKG KPW+SLP+GKG+
Sbjct: 181 GANLGRIGVITNRERHPGSSDVVHVKDANDNSFATRLSNIFVIGKGHKPWISLPRGKGVH 240
Query: 181 LSIIEEARK 189
L+I E K
Sbjct: 241 LTIARERDK 249
>gi|17543386|ref|NP_501103.1| Protein RPS-4 [Caenorhabditis elegans]
gi|75023042|sp|Q9N3X2.1|RS4_CAEEL RecName: Full=40S ribosomal protein S4
gi|351051215|emb|CCD74049.1| Protein RPS-4 [Caenorhabditis elegans]
Length = 259
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 142/191 (74%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV
Sbjct: 66 QRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+ +KF+ GN+ VTGG
Sbjct: 126 KSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG K VSLP G GI+L
Sbjct: 186 RNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRL 245
Query: 182 SIIEEARKRQA 192
SI EE KR A
Sbjct: 246 SIAEERDKRMA 256
>gi|357017173|gb|AET50615.1| hypothetical protein [Eimeria tenella]
Length = 262
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 141/186 (75%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD+ YPAGFMDVVS+ KT ++FRLL DTKGRF I EEA +KLC+
Sbjct: 66 MQRLVKVDGKVRTDQCYPAGFMDVVSLEKTQQHFRLLLDTKGRFVPRPISAEEASYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G K IP + T+D RTIR+P P IK +DTI+L + +KI + KF+VGNV MVTG
Sbjct: 126 VKKVLIGPKAIPMLVTHDARTIRFPHPNIKVHDTIRLSIADSKIVDTYKFEVGNVAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG I NRE+H GSF+ +H++D+ G+EFATR+ NVF IGKG KP VSLPK KGI+
Sbjct: 186 GHNVGRVGTIVNRERHLGSFDIVHLRDSRGNEFATRISNVFVIGKGEKPMVSLPKDKGIR 245
Query: 181 LSIIEE 186
L+I E+
Sbjct: 246 LTIFED 251
>gi|308491676|ref|XP_003108029.1| CRE-RPS-4 protein [Caenorhabditis remanei]
gi|308249976|gb|EFO93928.1| CRE-RPS-4 protein [Caenorhabditis remanei]
Length = 259
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 143/191 (74%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV
Sbjct: 66 QRIVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFKLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
RSV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KI++F+KF+ GN+ VTGG
Sbjct: 126 RSVRTLNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKISDFVKFEPGNLAYVTGG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR+GII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG K VSLP G G++L
Sbjct: 186 RNVGRIGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPSGNGVRL 245
Query: 182 SIIEEARKRQA 192
SI EE KR A
Sbjct: 246 SIAEERDKRIA 256
>gi|321448588|gb|EFX61505.1| hypothetical protein DAPPUDRAFT_304892 [Daphnia pulex]
Length = 176
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 138/178 (77%), Gaps = 3/178 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD +VRTD YPAGFMDV++I T E FRL+Y+ KG F +H I A++KLCK
Sbjct: 1 MQRLIKVDGEVRTDSNYPAGFMDVITIDNTGEYFRLVYNVKGCFAIHRI---TAEYKLCK 57
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+ TNKI +FIKFD GN+ M+ G
Sbjct: 58 VRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNLWMIIG 117
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 178
G N GRVG NRE++ GSF+ H++DALGH FATRL NVF IGKG+K ++SLP+ KG
Sbjct: 118 GCNLGRVGTTINRERYPGSFDIAHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKG 175
>gi|313236165|emb|CBY11489.1| unnamed protein product [Oikopleura dioica]
gi|313240142|emb|CBY32493.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 146/192 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD +PAGFMDV+S+ +TNE+FRL+YD KGRF +H I EE K+KLC+
Sbjct: 66 MQRLVKVDGKVRTDVNFPAGFMDVISMERTNEHFRLIYDVKGRFAVHRITPEEGKYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + KG+P++ T+D RTIRYP+P IK ND++ +D+E+ +TE ++FD G++ M+TG
Sbjct: 126 ITKIGVAAKGVPFVVTHDARTIRYPNPDIKVNDSVIVDIESGAVTEHVRFDTGSLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I +R++H GSF+ ++I+DA G FATRL NVF IG+G + VSLP+ KGI+
Sbjct: 186 GHNLGRVGVIASRDRHPGSFDIVNIKDATGAVFATRLDNVFIIGRGKQALVSLPRQKGIR 245
Query: 181 LSIIEEARKRQA 192
+SI EE KR A
Sbjct: 246 ISIAEEREKRLA 257
>gi|2463335|emb|CAA75242.1| ribosomal protein S4 [Oryza sativa Japonica Group]
Length = 268
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
VRSVQFGQKGIPY+NTY T Y + + + + + + + ++ G ++ +
Sbjct: 126 VRSVQFGQKGIPYLNTYVVPTDTYMATIATRPTSGKRHNQDRSGDQQELRLHQGLMLAMC 185
Query: 120 GGRNRGRVGIIKNREK--HKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
G R + ++++ KGSFETIH++DALGH+FATRLGNVFTIGKG KPWVSLPKGK
Sbjct: 186 HGDWRRNTAVWCDQQQGEAKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGK 245
Query: 178 GIKLSIIE 185
GIKLSIIE
Sbjct: 246 GIKLSIIE 253
>gi|323304664|gb|EGA58427.1| Rps4bp [Saccharomyces cerevisiae FostersB]
Length = 167
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 133/165 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 1 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 61 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGE 165
>gi|323457181|gb|EGB13047.1| hypothetical protein AURANDRAFT_69604 [Aureococcus anophagefferens]
Length = 260
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 137/190 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M +HV VD KVRTD TYPAGFMDV+S+ + + FRL+YDTKGRF LH I DEE +KLC+
Sbjct: 66 MSKHVKVDGKVRTDPTYPAGFMDVISMDASGDQFRLMYDTKGRFTLHRISDEEKGYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V +V K IP + T+DGRT+RYPDP + +DT+KLD+ T KI F KF+VG +T
Sbjct: 126 VNAVYVTAKKIPVLTTHDGRTVRYPDPSVAVHDTVKLDIATGKIVSFQKFEVGKTCTITK 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I EKH GSF+ + ++DA H FATRLGNVF IGK V+LPKGKGIK
Sbjct: 186 GRNTGRVGTIMTVEKHPGSFDIVTVKDASNHTFATRLGNVFVIGKDDDLDVTLPKGKGIK 245
Query: 181 LSIIEEARKR 190
L+IIEE K+
Sbjct: 246 LTIIEERTKK 255
>gi|355336756|gb|AER57863.1| 40S ribosomal protein S4 [Acytostelium subglobosum]
Length = 267
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 144/186 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ V+ VRTD +P GFMDV++I KT E+FRLL+DTKGRF+L I+ EAKF L +
Sbjct: 66 MQRHIQVNGVVRTDPRFPVGFMDVITIEKTKEHFRLLFDTKGRFQLQRIQPNEAKFILTR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ G +GIPY++T +G+T RYPDP IK +DT+K+DL+T KIT FI F++ N+ MVTG
Sbjct: 126 VTKVETGLQGIPYVHTDNGQTFRYPDPAIKIHDTVKIDLDTQKITAFIPFELNNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H+ D++GH FATRLGNVF IGKG+ +VSL KG++
Sbjct: 186 GHNLGRVGVITNRERHPGSFDIVHVTDSVGHSFATRLGNVFVIGKGSTTFVSLLSSKGVR 245
Query: 181 LSIIEE 186
S +++
Sbjct: 246 KSRMDD 251
>gi|255710091|gb|ACU30865.1| 40S ribosomal protein S4 [Ochlerotatus triseriatus]
Length = 178
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 140/179 (78%), Gaps = 2/179 (1%)
Query: 20 GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 79
GFMDV++I KT+ENFRL+YD KGRF +H I EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 1 GFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 60
Query: 80 RTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGS 139
RTIRYPDP+I ND+I+ D+ T K+ + +KF+ GN+ M+TGGRN GRVG + REKH GS
Sbjct: 61 RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRVGTVIQREKHPGS 120
Query: 140 FETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 198
FE +HI+D+ GH FATRL NVF IGK TK ++SLPKGKG+KLSI EE +R LA+ AA
Sbjct: 121 FEIVHIKDSTGHVFATRLTNVFIIGKATKAFISLPKGKGVKLSIAEERDRR--LASKAA 177
>gi|399218543|emb|CCF75430.1| unnamed protein product [Babesia microti strain RI]
Length = 261
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 146/192 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ V VD K+RTD YP G+MDVV+I +TNENFRLLYDTKGRF I EEA++KLC+
Sbjct: 65 MQKLVKVDGKIRTDTCYPIGYMDVVTIDRTNENFRLLYDTKGRFVPIKISPEEAEYKLCR 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G K IP T+DGRTIR+ P +KA DT++LD+ + K+ EF+KF++GN+ MVTG
Sbjct: 125 VKRVVLGPKEIPLAVTHDGRTIRFIHPEVKAGDTLRLDISSGKVLEFLKFEIGNLAMVTG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVGII +R+KH G F+ I+I+D++G+ F+TR+ NVF IGKG K +V+LPK KGIK
Sbjct: 185 GHNVGRVGIITSRQKHDGGFDIINIRDSIGNSFSTRVSNVFVIGKGPKSYVTLPKYKGIK 244
Query: 181 LSIIEEARKRQA 192
+IIEE R A
Sbjct: 245 HTIIEERNARLA 256
>gi|167393127|ref|XP_001740437.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165895490|gb|EDR23170.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 308
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 136/185 (73%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AKFKLCK+
Sbjct: 50 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIE 109
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG
Sbjct: 110 KRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGN 169
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KGIK
Sbjct: 170 GMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKP 229
Query: 183 IIEEA 187
++++
Sbjct: 230 LLQQV 234
>gi|401396346|ref|XP_003879799.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
gi|325114207|emb|CBZ49764.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
Length = 263
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/185 (62%), Positives = 148/185 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YPAGFMDV+SI KT E+FR+L+DTKGRF H IRDEEA +KLC+
Sbjct: 66 MQRLIKVDNKVRTDQCYPAGFMDVISIEKTKEHFRMLFDTKGRFVPHPIRDEEASYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ V G KG+P + T+DGRT+RYP P IKA+D ++LDL T KI + +KF+ GN+ MVTG
Sbjct: 126 VKKVVVGPKGVPALITHDGRTMRYPHPSIKAHDCVRLDLNTGKIVDTLKFEAGNLAMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG++ +RE+H G F+ IH++DA G+EFATR+ NVF IGKG K W+SLPK KGI+
Sbjct: 186 GHNVGRVGVVVHRERHLGGFDIIHLRDAKGNEFATRISNVFIIGKGEKAWISLPKEKGIR 245
Query: 181 LSIIE 185
LSI+E
Sbjct: 246 LSIME 250
>gi|167379757|ref|XP_001735270.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165902828|gb|EDR28553.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 317
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 136/185 (73%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AKFKLCK+
Sbjct: 59 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIE 118
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG
Sbjct: 119 KRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGN 178
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KGIK
Sbjct: 179 GMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKP 238
Query: 183 IIEEA 187
++++
Sbjct: 239 LLQQV 243
>gi|67465453|ref|XP_648911.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67466127|ref|XP_649211.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|67481379|ref|XP_656039.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|167381290|ref|XP_001735654.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|56465221|gb|EAL43529.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56465596|gb|EAL43825.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56473205|gb|EAL50644.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902270|gb|EDR28139.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 136/185 (73%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AKFKLCK+
Sbjct: 68 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIE 127
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG
Sbjct: 128 KRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGN 187
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KGIK
Sbjct: 188 GMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKP 247
Query: 183 IIEEA 187
++++
Sbjct: 248 LLQQV 252
>gi|429329492|gb|AFZ81251.1| 40S ribosomal protein S4, putative [Babesia equi]
Length = 263
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 142/197 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYP GFMD+VS+ +TNE FR+LYDTKGRF H I EEA +KLC+
Sbjct: 66 MQRLVKVDGKVRTDITYPTGFMDIVSLDRTNEFFRMLYDTKGRFCPHKITPEEASYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G K + T+DGRTIRY P IKA D++++DL T KI +F+KF++GN+VMVTG
Sbjct: 126 VKKTFLGPKEVNIAITHDGRTIRYVHPEIKAGDSVRVDLATGKILDFLKFEIGNLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG I N+EKH GSF+ IHI+D+ F+TR NVF IG G++P+VSLP GI+
Sbjct: 186 GHNVGRVGTIVNKEKHPGSFDLIHIKDSQDSTFSTRSSNVFVIGLGSQPYVSLPSDNGIR 245
Query: 181 LSIIEEARKRQALATSA 197
SIIE+ R A A A
Sbjct: 246 KSIIEQRAIRLAKAARA 262
>gi|167391306|ref|XP_001739715.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165896474|gb|EDR23879.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 326
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 136/185 (73%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AKFKLCK+
Sbjct: 68 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIE 127
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG
Sbjct: 128 KRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGN 187
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KGIK
Sbjct: 188 GMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKP 247
Query: 183 IIEEA 187
++++
Sbjct: 248 LLQQV 252
>gi|167389537|ref|XP_001738997.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
gi|165897520|gb|EDR24644.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
SAW760]
Length = 390
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 136/185 (73%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AKFKLCK+
Sbjct: 132 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIE 191
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG
Sbjct: 192 KRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGN 251
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KGIK
Sbjct: 252 GMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKP 311
Query: 183 IIEEA 187
++++
Sbjct: 312 LLQQV 316
>gi|37779112|gb|AAP20216.1| 40S ribosomal protein S4 [Pagrus major]
Length = 225
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/160 (63%), Positives = 129/160 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDPLIK NDT+++DL+T KIT+FIKFD N+ MVTG
Sbjct: 126 VKKLIVGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTANLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNV 160
G N GR+G+I NRE+H GSF+ +H+ D+ G+ FATRL N+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVTDSTGNNFATRLSNI 225
>gi|156088951|ref|XP_001611882.1| ribosomal protein S4e [Babesia bovis T2Bo]
gi|154799136|gb|EDO08314.1| ribosomal protein S4e, putative [Babesia bovis]
Length = 262
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 142/195 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+ V +D KVRTD TYP GFMDVVS+ +TNE+FRLLYDTKGRF H I EEA +KLC+
Sbjct: 66 MQKVVRIDGKVRTDMTYPIGFMDVVSLERTNEHFRLLYDTKGRFVPHKITPEEASYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V G K + T+DGRTIR+ P +K D++++DLET K+ EF KF+VGN+VM+TG
Sbjct: 126 VIKTFLGPKEVGMAVTHDGRTIRFVHPDVKPGDSLRIDLETGKVLEFFKFEVGNLVMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N+GRVG I ++E+H GSF+ IH++D LG+ F TR NVF IG GT +VSLPK +GIK
Sbjct: 186 GHNQGRVGTIVHKERHPGSFDLIHVRDELGNNFCTRCSNVFVIGVGTNNYVSLPKERGIK 245
Query: 181 LSIIEEARKRQALAT 195
IIE+ R A A+
Sbjct: 246 KGIIEDRADRLARAS 260
>gi|395748095|ref|XP_003778710.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pongo abelii]
Length = 266
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 133/192 (69%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D +VR TYPAGFMDV I KT E+F L+YDTKG F ++ I EEAK+ LCK
Sbjct: 66 MQRFIKIDGEVRVAITYPAGFMDVTGIEKTGEHFCLVYDTKGCFAVYRITVEEAKYNLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIPY+ T+D TI Y DPLIK N+T+++DL T KI FIKF GNV MV G
Sbjct: 126 VRKVTMGMKGIPYLVTHDTGTIHYADPLIKVNNTVQIDLGTGKIINFIKFHAGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + VG+ NRE+H GS +H++DA G+ A RL N+F G G+KPW+SLP+ KG +
Sbjct: 186 GASLSHVGVTTNRERHPGSLSVVHVRDANGNSLALRLSNIFVTGNGSKPWISLPREKGTR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEEGEKRLA 257
>gi|334184265|ref|NP_001189539.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
gi|330251523|gb|AEC06617.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
Length = 184
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/116 (90%), Positives = 109/116 (93%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVG V
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181
>gi|444708012|gb|ELW49140.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 177
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 131/177 (74%)
Query: 22 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 81
MDV+SI KT ENF L+YD KGR +H I EEAK+KLCK+R + G KGIP++ T+D T
Sbjct: 1 MDVISIDKTRENFHLIYDIKGRVAVHCITPEEAKYKLCKMRKIFVGTKGIPHLVTHDAHT 60
Query: 82 IRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
I YPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG N R+G+I NRE+H GSF+
Sbjct: 61 ICYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGHANLKRIGVITNRERHPGSFD 120
Query: 142 TIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAA 198
H++D G+ FAT+ N+F I KG KPWV LP+GKGI+L+I EE KR A S+
Sbjct: 121 VAHVKDPNGNSFATQPSNIFVISKGNKPWVYLPRGKGIRLTIAEERDKRLAAKQSSG 177
>gi|428174786|gb|EKX43680.1| small subunit ribosomal protein S4e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 263
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R + VD K+RTD TYP GFMDV+SI KT E+FRLL+DTKGRF LH + +A+ KLC+V
Sbjct: 67 SRSIKVDGKIRTDVTYPCGFMDVLSIEKTGEHFRLLHDTKGRFVLHRLTQADAQHKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+S+ G +PYI T+DGRTIRYPDPLIK NDT+++DL TN I F KF+VGNV +TGG
Sbjct: 127 KSLGVGINKVPYIVTHDGRTIRYPDPLIKPNDTVQIDLATNTIIGFSKFEVGNVCAITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS-LPKGKGIK 180
N GRVGII++ EKH GS +HI+D G +ATR NVF + G KP + + + +GIK
Sbjct: 187 HNIGRVGIIQSTEKHPGSHNIVHIKDKTGATWATRQSNVFVLATGKKPEKAYILRTQGIK 246
Query: 181 LSIIEEARKRQ 191
SIIEE R+RQ
Sbjct: 247 HSIIEEQRRRQ 257
>gi|2500489|sp|P55832.1|RS4_HORSE RecName: Full=40S ribosomal protein S4
gi|4432936|dbj|BAA21075.1| ribosomal protein S4 [Macaca fuscata]
gi|4432938|dbj|BAA21077.1| ribosomal protein S4 [Felis catus]
gi|4432940|dbj|BAA21079.1| ribosomal protein S4 [Canis lupus familiaris]
gi|4432941|dbj|BAA21080.1| ribosomal protein S4 [Equus caballus]
gi|4432942|dbj|BAA21081.1| ribosomal protein S4 [Sus scrofa]
Length = 194
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/148 (68%), Positives = 123/148 (83%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 47 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 106
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 107 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 166
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDA 148
G N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 167 GANLGRIGVITNRERHPGSFDVVHVKDA 194
>gi|47935075|gb|AAT39884.1| ribosomal protein S4 [Branchiostoma belcheri tsingtauense]
Length = 158
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/158 (63%), Positives = 124/158 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H I EEAK+KLCK
Sbjct: 1 MQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGIP + T+D RTIRYPDP I+ ND++++D+ T KIT+ IKFD GNV MVTG
Sbjct: 61 VRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTG 120
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLG 158
GRN GRVG++ NRE+H GSF+ +H++D H FATRL
Sbjct: 121 GRNLGRVGLVTNRERHPGSFDIVHVKDTASHTFATRLA 158
>gi|440293545|gb|ELP86648.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
gi|440298945|gb|ELP91560.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
Length = 328
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 135/189 (71%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R+V +D KVRTD +P GFMDV+SIP+T E FRLLY+TK RF L + E++ KLCKV
Sbjct: 67 NRNVKIDGKVRTDSRFPVGFMDVLSIPRTKEYFRLLYNTKRRFCLVPLSKEQSTIKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G GIPYI T+DGRTIRYP P I+ANDTIKLDL NKI +F+KFDVGN M+ GG
Sbjct: 127 EKRTLGTFGIPYIITHDGRTIRYPHPEIQANDTIKLDLVNNKIVDFVKFDVGNTAMLIGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
+ GR+G++ RE H GSFE +HI+DA G F TRL NVF IGKGT+ V+LP +GIK
Sbjct: 187 NSMGRIGVVVKREVHPGSFEIVHIKDANGTIFTTRLANVFIIGKGTETLVNLPLDQGIKK 246
Query: 182 SIIEEARKR 190
+I+ +R
Sbjct: 247 PLIKAVNER 255
>gi|4432939|dbj|BAA21078.1| ribosomal protein S4 [Bos taurus]
Length = 194
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/148 (68%), Positives = 122/148 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI K ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 47 MQRFIKIDGKVRTDVTYPAGFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCK 106
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 107 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 166
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDA 148
G N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 167 GANLGRIGVITNRERHPGSFDVVHVKDA 194
>gi|402909065|ref|XP_003917249.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Papio
anubis]
Length = 246
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D VR TYPAGFMDV+ I KT E+F L+YDTKG F ++ I EEAK+ LCK
Sbjct: 48 MQCFIKIDGTVRVATTYPAGFMDVIGIEKTGEHFCLVYDTKGCFAVYRIPVEEAKYNLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
R G KGIPY+ ++D TI YPDPLIK N +K+DL T KI FIKF GNV MV G
Sbjct: 108 GRKSTVGMKGIPYLVSHDTGTIHYPDPLIKVNHAVKIDLGTGKIINFIKFHTGNVCMVIG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + RVG+ NR++H GS +H++DA G+ FATRL N+F IG G+KPW+SLP+ KGI+
Sbjct: 168 GASLSRVGVTTNRQRHPGSLN-VHVRDASGNSFATRLSNIFVIGNGSKPWISLPRRKGIR 226
Query: 181 LSIIEE 186
L+I EE
Sbjct: 227 LTIAEE 232
>gi|431891055|gb|ELK01933.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 452
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 129/174 (74%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ + +D+KV TD TYPAGFMDV+SI KT EN L+YD +G F +H I E+AK+KLCK
Sbjct: 66 IQQFIKIDSKVWTDVTYPAGFMDVISIDKTRENLCLIYDIRGHFPIHQITPEKAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+R KGIP++ +D T+ YPDPLIK N TI++DL+T KIT+FIKFD GN+ MVT
Sbjct: 126 MRKTFVSTKGIPHLVIHDACTMCYPDPLIKVNGTIRIDLQTGKITDFIKFDTGNLCMVTV 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G N GR+G+I NRE H GSF+ ++++DA G FATRL N+ IGK KPW+SLP
Sbjct: 186 GDNLGRIGVITNRESHSGSFDVVNVKDANGDSFATRLSNICIIGKDNKPWLSLP 239
>gi|440466935|gb|ELQ36176.1| 40S ribosomal protein S4-A [Magnaporthe oryzae Y34]
gi|440478756|gb|ELQ59557.1| 40S ribosomal protein S4-A [Magnaporthe oryzae P131]
Length = 280
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 143/210 (68%), Gaps = 19/210 (9%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDVVSI KT ENFRL+YDTKGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDSTYPAGFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQF----GQKGIP------------YINTYDGR--TIRYPDPLIKANDTIKLDLETN 102
G G P + + GR IRYPDPLIK NDT+K++L+T
Sbjct: 126 PLDQALVDPQGPLGRPEPSDLFRYEVLGWKWDFWGRNGCIRYPDPLIKVNDTVKINLDTG 185
Query: 103 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFT 162
KIT+FIKFD G + MVT G N GRVG+I +RE+H G F +H++DA+ + F TR NVF
Sbjct: 186 KITDFIKFDTGALAMVTAGNNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFV 245
Query: 163 IGKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
IG KPW+SLPKGKG+KL+I EE +R+A
Sbjct: 246 IGT-EKPWISLPKGKGVKLTIAEERDRRRA 274
>gi|340509077|gb|EGR34650.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 260
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 138/189 (73%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+++V VD K R D+++P G MDVVSIPKT+E FR+LYDTKGRF L ++ +EA+FKL KV
Sbjct: 69 EQNVFVDGKCRRDRSFPTGLMDVVSIPKTDEQFRVLYDTKGRFVLKTLNKQEAQFKLLKV 128
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G +PYI T+D RTIR+P+P IK DTIK D+ NKI EF + GN+ V G
Sbjct: 129 KGKAIGPNQVPYIVTHDSRTIRFPNPNIKIGDTIKYDIVKNKILEFAHLESGNICFVQNG 188
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I + EKH GSF+ +H++D G+ FATR+GN+F IG+G KPWVSLP+G GI
Sbjct: 189 NNIGRVGLITHIEKHPGSFDIVHVKDTKGNSFATRIGNIFVIGQGKKPWVSLPEGDGIYE 248
Query: 182 SIIEEARKR 190
+++E+ +++
Sbjct: 249 TVMEQRQRK 257
>gi|188572462|gb|ACD65137.1| putative 40S ribosomal protein RPS4 [Phoronis muelleri]
Length = 229
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KT ENFRL+YD KGRF +H I EEA +KLCK
Sbjct: 66 MQRLIKVDGKVRTDFCYPAGFMDVITIEKTGENFRLIYDVKGRFTVHRITKEEAGYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KG+P I T+DGRTIRYPDP+ K NDT+++D+ + KI +FIKFD GN+ M+TG
Sbjct: 126 VRKVYTGPKGVPLIVTHDGRTIRYPDPMCKVNDTVQVDIASGKIKDFIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
GRN RVG++ +RE+H GSF+ HI+D GH FAT++G IG
Sbjct: 186 GRNLRRVGLVTHRERHPGSFDVCHIKDVNGHTFATKVGKCVIIG 229
>gi|219110737|ref|XP_002177120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411655|gb|EEC51583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 135/184 (73%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M+R V VD KVRTD YP GFMDVV + K+ + FR+L+D+KGRF LH I EE+++KLC+
Sbjct: 66 MERCVKVDGKVRTDHNYPTGFMDVVELEKSGDRFRILFDSKGRFVLHRINREESQYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + G K IP T+DGRTIRYPDP K NDT+K+DL T K+++ IKF++G +V +
Sbjct: 126 INKIYIGSKKIPVAVTHDGRTIRYPDPDAKVNDTVKVDLATGKMSDIIKFELGAMVTLVR 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + + E+H SF+ + ++DA GH FATRL NVF IG GT P +SLPKG+GIK
Sbjct: 186 GRNAGRVGTLMHIERHLNSFDIVTVKDAKGHTFATRLHNVFVIGNGTTPQISLPKGRGIK 245
Query: 181 LSII 184
SII
Sbjct: 246 KSII 249
>gi|55982009|gb|AAV69397.1| 40S ribosomal protein S4 [Aedes aegypti]
Length = 270
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 140/196 (71%), Gaps = 4/196 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ +D KVRTD YPAGFMDV++I KTNENFRL+YD KGRF +H I EEAK+KL K
Sbjct: 66 MQRHIKIDGKVRTDPNYPAGFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +P+I T+DGRTIRYPDP+I ND+I+ D+ T K+ + +KF+ GN M+TG
Sbjct: 126 VKRVQIGPKKVPFILTHDGRTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNPCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL-GNVFTIG-KGTKPWVS-LPKGK 177
GRN GR G + REKH GSFE +H++DA GH FATR VF + T+ + S PKG+
Sbjct: 186 GRNLGRCGTVIQREKHPGSFEIVHVKDATGHVFATRSEPTVFHHWVRATQGFSSRCPKGQ 245
Query: 178 GI-KLSIIEEARKRQA 192
G+ +L + E QA
Sbjct: 246 GVSRLVHLAEGNAEQA 261
>gi|260950591|ref|XP_002619592.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
gi|238847164|gb|EEQ36628.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
Length = 224
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/153 (64%), Positives = 123/153 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I EE +KL K
Sbjct: 48 MQEHVKVDGKVRTDSTYPAGFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGSYKLGK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G+K IPY+ T+DGRTIRYPDP I+ANDT+K+DL T KIT+FIKFD G +VMVTG
Sbjct: 108 VKKIALGKKAIPYVVTHDGRTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEF 153
G+N GRVG+I +REKH+G F+ +HI+DAL + F
Sbjct: 168 GKNLGRVGVIVHREKHEGGFDLVHIKDALDNTF 200
>gi|340505756|gb|EGR32063.1| hypothetical protein IMG5_097290 [Ichthyophthirius multifiliis]
Length = 260
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 139/189 (73%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+++V VD K R D+ +P G MDVV+IPKT+ENFR+LYDTKGRF L ++ +EA+FKL KV
Sbjct: 69 EQNVFVDGKCRRDRGFPTGLMDVVNIPKTDENFRVLYDTKGRFVLKTLNKQEAQFKLLKV 128
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G +PYI T+D RTIR+P+P IK DTIK DL NKI E + GN+ V G
Sbjct: 129 KGKAIGPNQVPYIVTHDSRTIRFPNPNIKIGDTIKYDLVKNKILEHTHLESGNICFVQNG 188
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I + EKH GSF+ +H++D+ G+ FATR+GN+F IG+G KPW+SLP+G+GI
Sbjct: 189 NNIGRVGLITHIEKHPGSFDIVHVKDSKGNSFATRIGNIFVIGQGKKPWISLPEGEGIYE 248
Query: 182 SIIEEARKR 190
+++E+ +++
Sbjct: 249 TVMEQRQRK 257
>gi|328866983|gb|EGG15366.1| 40S ribosomal protein S4 [Dictyostelium fasciculatum]
Length = 266
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 131/186 (70%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V ++ VRTD +P GFMDV++I KT ENFRLLYDTKG F+L I+ EAKF L +
Sbjct: 67 MQRLVKINGVVRTDPKFPVGFMDVITIDKTKENFRLLYDTKGHFQLQRIQPSEAKFILTR 126
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ G GIPY++T DG T RYPDP I +DT+K+DLET KI I N+ M+ G
Sbjct: 127 VTKVETGIHGIPYLHTEDGHTHRYPDPEIHRHDTVKVDLETGKIAAHIPLATHNLCMIIG 186
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVGII N EKH GSF+ +I D++GH FATRL NVF IG+G +VSLP GKG++
Sbjct: 187 GHNTGRVGIINNIEKHPGSFDVAYITDSVGHSFATRLSNVFIIGQGQTTFVSLPAGKGVR 246
Query: 181 LSIIEE 186
S ++E
Sbjct: 247 RSAVDE 252
>gi|319443378|pdb|2XZM|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443413|pdb|2XZN|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|315570299|tpg|DAA33968.1| TPA_exp: 40S ribosomal protein rpS4e [Tetrahymena thermophila]
Length = 260
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+++V VD KVR DK YP G MDVV I KT+++FR+LYDTKGRF L S+ EEAK+KL KV
Sbjct: 69 EQNVFVDGKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKV 128
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G IPYI T+D RTIR+P+P IK DT+K DL NKI F + GNV + G
Sbjct: 129 TAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQG 188
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K W+ LP G G++
Sbjct: 189 NNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRE 248
Query: 182 SIIEEARKRQ 191
+I+EE RKR+
Sbjct: 249 TILEE-RKRK 257
>gi|118376768|ref|XP_001021565.1| Ribosomal family S4e containing protein [Tetrahymena thermophila]
gi|89303332|gb|EAS01320.1| Ribosomal family S4e containing protein [Tetrahymena thermophila
SB210]
Length = 370
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 136/189 (71%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+++V VD KVR DK YP G MDVV I KT+++FR+LYDTKGRF L S+ EEAK+KL KV
Sbjct: 179 EQNVFVDGKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKV 238
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G IPYI T+D RTIR+P+P IK DT+K DL NKI F + GNV + G
Sbjct: 239 TAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQG 298
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K W+ LP G G++
Sbjct: 299 NNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRE 358
Query: 182 SIIEEARKR 190
+I+EE +++
Sbjct: 359 TILEERKRK 367
>gi|71029346|ref|XP_764316.1| 40S ribosomal protein S4 [Theileria parva strain Muguga]
gi|68351270|gb|EAN32033.1| 40S ribosomal protein S4, putative [Theileria parva]
Length = 262
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 139/191 (72%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRTD TYP GFMDVVS+ KTNE FR+LYDTKGRF H I DEEA +KLC+V
Sbjct: 67 QRLVKVDGKVRTDITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEATYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G K + T+DGRT R P +KA D++++++ T K+ EF+KF+ GN+VM+TGG
Sbjct: 127 KKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLVMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG + ++EKH GSF+ +H++D+ + F+TR NVF IG GTK +VSLP +G++
Sbjct: 187 HNVGRVGTVVSKEKHPGSFDLVHVKDSQDNTFSTRSSNVFVIGVGTKSYVSLPYERGLRK 246
Query: 182 SIIEEARKRQA 192
+IIE+ +R A
Sbjct: 247 TIIEQRNERLA 257
>gi|84997205|ref|XP_953324.1| 40s ribosomal protein s4 [Theileria annulata strain Ankara]
gi|65304320|emb|CAI76699.1| 40s ribosomal protein s4, putative [Theileria annulata]
Length = 254
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 138/191 (72%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRTD TYP GFMDVVS+ KTNE FR+LYDTKGRF H I DEEA +KLC+V
Sbjct: 59 QRLVKVDGKVRTDITYPTGFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEATYKLCRV 118
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G K + T+DGRT R P +KA D++++++ T K+ EF+KF+ GN+VM+TGG
Sbjct: 119 KKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLVMITGG 178
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG + ++EKH GSF+ +H++D+ F+TR NVF IG GTK +VSLP +G++
Sbjct: 179 HNVGRVGTVVSKEKHPGSFDLVHVKDSQDSTFSTRSTNVFVIGVGTKSYVSLPAERGLRK 238
Query: 182 SIIEEARKRQA 192
+IIE+ +R A
Sbjct: 239 TIIEQRNERLA 249
>gi|432089928|gb|ELK23579.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 210
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 130/198 (65%), Gaps = 35/198 (17%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 48 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK----- 102
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
NDTI+ DLET KIT+FIKFD GN+ MVTG
Sbjct: 103 ------------------------------VNDTIQTDLETGKITDFIKFDTGNLCMVTG 132
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 133 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 192
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 193 LTIAEERDKRLAAKQSSG 210
>gi|160331849|ref|XP_001712631.1| rps4 [Hemiselmis andersenii]
gi|159766080|gb|ABW98306.1| rps4 [Hemiselmis andersenii]
Length = 250
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 132/179 (73%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD K+RT+K YPAG MD++SI KT ENFRLL DT GRF LH I ++E+ FKLCKV
Sbjct: 67 QRSIKVDKKIRTEKNYPAGLMDIISIEKTEENFRLLVDTFGRFILHRIEEKESMFKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
GQ+GIPYI T+DGRTIR+PDP IK NDTI DL KI +FIKF+VG++ ++TGG
Sbjct: 127 TKSTKGQRGIPYIVTHDGRTIRFPDPFIKTNDTILFDLSEKKIIDFIKFEVGSLCIITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
N GR+GI+ + K+ E I ++DA G EF+T+ +F IGKG K ++SLPKGKGI+
Sbjct: 187 PNVGRIGIVLQQGKNFLEEEMIKLKDAKGSEFSTKFSFIFVIGKGKKSFISLPKGKGIR 245
>gi|402697606|gb|AFQ90988.1| X-linked ribosomal protein S4, partial [Draco beccarii]
Length = 193
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 118/143 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 51 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCK 110
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KITEFIKFD GN+ MVTG
Sbjct: 111 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITEFIKFDTGNLCMVTG 170
Query: 121 GRNRGRVGIIKNREKHKGSFETI 143
G N GR+G+I NRE+H GSF+ +
Sbjct: 171 GANLGRIGVITNRERHPGSFDVV 193
>gi|403223747|dbj|BAM41877.1| 40S ribosomal protein S4 [Theileria orientalis strain Shintoku]
Length = 261
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRTD TYP GFMDVVS+ +TNE FR+LYDTKGRF H I DEEA +KLC+V
Sbjct: 67 QRLVKVDGKVRTDMTYPTGFMDVVSLDRTNEKFRMLYDTKGRFCPHKITDEEATYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G K + T+DGRT R P +KA D++++++ T KI E++KF+ GN+VMVTGG
Sbjct: 127 KKTFLGPKEVNLAVTHDGRTFRCVHPEVKAGDSLRVEVATGKILEYLKFEPGNLVMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG + ++EKH GSF+ +H++D+ F TR NVF IG GTK +VSLP +GI+
Sbjct: 187 HNVGRVGTVVSKEKHPGSFDLVHVRDSNDSTFTTRSSNVFVIGVGTKSYVSLPAERGIRK 246
Query: 182 SIIEEARKRQALATSA 197
+IIE+ R LA SA
Sbjct: 247 TIIEQRNLR--LAKSA 260
>gi|223996813|ref|XP_002288080.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
gi|220977196|gb|EED95523.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
Length = 261
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 139/192 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M+R V +D KVRTD YPAGFMDVV + K+ + FRLLYDTKGRF LH I+ +EA++KLC+
Sbjct: 66 MERCVKIDGKVRTDHNYPAGFMDVVELEKSGDRFRLLYDTKGRFVLHRIQKDEAEYKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
++ K +P T+DGRT+R+PDP + NDT+K+++ T K+++ KF++G ++MVT
Sbjct: 126 IQKGYMSAKKVPVAVTHDGRTLRFPDPDVAVNDTVKVNIATGKMSDIYKFEIGAMIMVTK 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG +++ EKH GSF + I+D G+ FATR NVF IG G P V+LPKG+GIK
Sbjct: 186 GHNAGRVGTLEHVEKHDGSFSIVTIKDKKGNTFATRQANVFVIGSGDHPQVTLPKGRGIK 245
Query: 181 LSIIEEARKRQA 192
+I++E + +A
Sbjct: 246 KTILQERAEAEA 257
>gi|323332920|gb|EGA74323.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
Length = 164
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 126/158 (79%)
Query: 35 RLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDT 94
RL+YD KGRF +H I DEEA +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT
Sbjct: 3 RLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDT 62
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 154
+K+DL + KIT+FIKFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F
Sbjct: 63 VKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFV 122
Query: 155 TRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
TRL NVF IG+ KP++SLPKGKGIKLSI EE +R+A
Sbjct: 123 TRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRA 160
>gi|4432937|dbj|BAA21076.1| Y-chromosome linked ribosomal protein S4 [Macaca fuscata]
Length = 165
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 118/148 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 18 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 77
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKF+ GNV MV G
Sbjct: 78 VRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIG 137
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDA 148
G N GRVG+I NRE+H GSF+ +H++DA
Sbjct: 138 GANLGRVGVITNRERHPGSFDVVHVKDA 165
>gi|258597201|ref|XP_001347741.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
gi|254832593|gb|AAN35654.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
Length = 261
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 138/190 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ V VD KVRTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K+KLCK
Sbjct: 66 IQKIVKVDNKVRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +KF VG++VMVT
Sbjct: 126 VKKILLRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQVGSLVMVTA 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GRVG+I + +K+ G+++ IH++D+ FATRL NVF IG TKP++SLP+ KGIK
Sbjct: 186 GHSVGRVGVISSIDKNMGTYDIIHVKDSRNKVFATRLSNVFVIGDNTKPYISLPREKGIK 245
Query: 181 LSIIEEARKR 190
L IIEE R R
Sbjct: 246 LDIIEERRNR 255
>gi|402697610|gb|AFQ90991.1| X-linked ribosomal protein S4, partial [Malaclemys terrapin]
Length = 193
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 118/143 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 51 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 110
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 111 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 170
Query: 121 GRNRGRVGIIKNREKHKGSFETI 143
G N GR+G+I NRE+H GSF+ +
Sbjct: 171 GANLGRIGVITNRERHPGSFDVV 193
>gi|70946979|ref|XP_743149.1| ribosomal protein S4 [Plasmodium chabaudi chabaudi]
gi|56522509|emb|CAH81099.1| ribosomal protein S4, putative [Plasmodium chabaudi chabaudi]
Length = 266
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K+KLCK
Sbjct: 71 IQKIVKVDNKTRTDCTFPVGLMDVIHITKSNEYFRLLYDVKGRFVPHRITNEESKYKLCK 130
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + + + T+DGR+I Y P +K NDTI+LDLE+ K+ E +KF VGN+VMVT
Sbjct: 131 VKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMVMVTA 190
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG TKP++SLP+ KGIK
Sbjct: 191 GHSVGRVGTILSIDKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDATKPYISLPREKGIK 250
Query: 181 LSIIEEARKR 190
L IIEE R R
Sbjct: 251 LDIIEERRNR 260
>gi|402593341|gb|EJW87268.1| ribosomal protein S4e [Wuchereria bancrofti]
Length = 197
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 23 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 82
DV+ I KTNE FRLLYD KGR+ H I ++E KLCK+ G KG+P+I T+D RTI
Sbjct: 22 DVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVRKCVGPKGVPFIVTHDARTI 81
Query: 83 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 142
RYPDP +K NDTI +D+ T K+++++KFD GN+ MVTGGRN GRVGI+ +REKH GSF+
Sbjct: 82 RYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREKHPGSFDI 141
Query: 143 IHIQDALGHEFATRLGNVFTIGKGTKPWVSLP-KGKGIKLSIIEEARKRQA 192
+HI+DA H FATRL NVF IGKGTK VSLP KG++L+I EE +R A
Sbjct: 142 VHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVRLTIAEERDRRLA 192
>gi|145495133|ref|XP_001433560.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400678|emb|CAK66163.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 138/188 (73%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V VD KVR+D YP G +DV++I KT E++R+LYD +G+F L SI+ +EAKFKL KV
Sbjct: 63 NVKVDGKVRSDFGYPVGLLDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQ 122
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +PYI T D RTIRYP+P I NDT+K+DLET K+ +FIK + GN+ + GG N
Sbjct: 123 KKVGPNNVPYIVTNDARTIRYPNPEIHINDTLKIDLETGKVVDFIKEEPGNICYIVGGNN 182
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG KP +SLP G+ L+
Sbjct: 183 IGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKPLISLPDDNGLYLTA 242
Query: 184 IEEARKRQ 191
+E+ + R+
Sbjct: 243 LEKKQARE 250
>gi|444721029|gb|ELW61786.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 219
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/141 (69%), Positives = 116/141 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQWFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLKTGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFE 141
G N GR+G+I NRE+H GSFE
Sbjct: 186 GANLGRIGVITNRERHPGSFE 206
>gi|82539137|ref|XP_723981.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii 17XNL]
gi|23478464|gb|EAA15546.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii]
Length = 253
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K+KLCK
Sbjct: 58 IQKIVKVDNKTRTDCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKYKLCK 117
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
++ + + + T+DGR+I Y P +K NDTI+LDLE+ K+ E +KF VGN+VMVT
Sbjct: 118 IKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMVMVTA 177
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG TKP++SLP+ KGIK
Sbjct: 178 GHSVGRVGTILSIDKNIGTYDIIHVKDSRGKVFATRLSNIFVIGDNTKPYISLPREKGIK 237
Query: 181 LSIIEEARKR 190
L IIEE R R
Sbjct: 238 LDIIEERRNR 247
>gi|397590955|gb|EJK55222.1| hypothetical protein THAOC_25064 [Thalassiosira oceanica]
Length = 261
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 140/192 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M+R V +D KVRTD YPAGFMD+V + K+ + FRLLYDTKGRF LH + +EA++KLC+
Sbjct: 66 MERCVKIDGKVRTDYNYPAGFMDIVELEKSGDIFRLLYDTKGRFVLHRVDKKEAEWKLCR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
++ V K IP T+DGRT+R+PDP +K NDT+K+++ T K+ E F++G+VVMVT
Sbjct: 126 IQKVYVTAKKIPVAVTHDGRTLRFPDPNVKVNDTVKVNIATGKMGEIFPFEMGSVVMVTK 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVGI+++ EKH GSF + ++D G+ FATR NVF IG G + +SLPKG+GIK
Sbjct: 186 GHNAGRVGILQHLEKHDGSFSIVTVKDKKGNVFATRQSNVFIIGAGERVELSLPKGRGIK 245
Query: 181 LSIIEEARKRQA 192
+II+E + +A
Sbjct: 246 KNIIQERAEAEA 257
>gi|402697604|gb|AFQ90987.1| X-linked ribosomal protein S4, partial [Cyrtodactylus sp. JJF-2012]
Length = 193
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 118/143 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 51 MQRFIKIDGKVRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCK 110
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI+++LET KIT+FIKFD GN+ MVTG
Sbjct: 111 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTG 170
Query: 121 GRNRGRVGIIKNREKHKGSFETI 143
G N GR+G+I NRE+H GSF+ +
Sbjct: 171 GANLGRIGVITNRERHPGSFDVV 193
>gi|340546083|gb|AEK51840.1| X-linked ribosomal protein S4 [Heteronotia binoei]
Length = 193
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 118/143 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 51 MQRFIKIDGKVRTDITYPAGFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCK 110
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI+++LET KIT+FIKFD GN+ MVTG
Sbjct: 111 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTG 170
Query: 121 GRNRGRVGIIKNREKHKGSFETI 143
G N GR+G+I NRE+H GSF+ +
Sbjct: 171 GANLGRIGVITNRERHPGSFDVV 193
>gi|118573853|sp|P0C233.1|RS4_TETTH RecName: Full=40S ribosomal protein S4; AltName: Full=40S ribosomal
protein S7
gi|1096035|prf||2110340A ribosomal protein S7
Length = 259
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V VD KVR DK YP G MDVV I KT+++FR+LYDTKGRF L S+ EEAK+KL KV +
Sbjct: 70 NVFVDQKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTA 129
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G IPYI T+D RTIR+P+P IK DT+K DL NKI F + GNV + G N
Sbjct: 130 KAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNN 189
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K ++ LP G G++ +I
Sbjct: 190 IGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKLYIELPSGDGVRETI 249
Query: 184 IEEARKRQ 191
+EE RKR+
Sbjct: 250 LEE-RKRK 256
>gi|221055832|ref|XP_002259054.1| ribosomal protein s4 [Plasmodium knowlesi strain H]
gi|193809125|emb|CAQ39827.1| ribosomal protein s4, putative [Plasmodium knowlesi strain H]
Length = 261
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 139/190 (73%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K+KLCK
Sbjct: 66 IQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +KF +G++VMVT
Sbjct: 126 VKKIILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTA 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG +KP++SLP+ KGIK
Sbjct: 186 GHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIK 245
Query: 181 LSIIEEARKR 190
L IIEE R +
Sbjct: 246 LDIIEERRNK 255
>gi|68073433|ref|XP_678631.1| ribosomal protein S4 [Plasmodium berghei strain ANKA]
gi|56499160|emb|CAI00409.1| ribosomal protein S4, putative [Plasmodium berghei]
Length = 260
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 136/190 (71%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ V VD K RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K+KLCK
Sbjct: 65 IQKIVKVDNKTRTDCTFPVGLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + + + T+DGR+I Y P +K NDTI+LDLET K+ E +KF VGN+VMVT
Sbjct: 125 VKKIILRKGKLSIAITHDGRSIPYIHPEVKVNDTIRLDLETGKVLEHLKFQVGNMVMVTA 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GRVG I + +K+ G+++ IH++D+ G FATRL N+F IG KP++SLP+ KGIK
Sbjct: 185 GHSVGRVGTILSIDKNIGTYDIIHVKDSRGKIFATRLSNIFVIGDALKPYISLPREKGIK 244
Query: 181 LSIIEEARKR 190
L IIEE R R
Sbjct: 245 LDIIEERRNR 254
>gi|183231631|ref|XP_001913602.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169802405|gb|EDS89621.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 318
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 131/185 (70%), Gaps = 8/185 (4%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK L
Sbjct: 68 RTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKRVL---- 123
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG
Sbjct: 124 ----GTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGN 179
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
GRVG+I RE H GSFE +HI+DA G+ F TRL NVF IGKGT+ V+LP KGIK
Sbjct: 180 GMGRVGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKP 239
Query: 183 IIEEA 187
++++
Sbjct: 240 LLQQV 244
>gi|403356345|gb|EJY77764.1| 40S ribosomal protein S4 [Oxytricha trifallax]
Length = 264
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 133/184 (72%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
+D K+R D +P G MDVV+I +T E+FR+LYD KGR++ H I +EA+FKLC +R
Sbjct: 74 IDGKIRRDPRFPLGIMDVVTIDRTGEHFRILYDVKGRYQAHKIDAKEAQFKLCSIRRKAM 133
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 126
G +PY+ T+DGRT+R+P P IK +DT+KL+LETN++ IKF+ G V++ GG N GR
Sbjct: 134 GPNKVPYVITHDGRTLRFPHPDIKKHDTVKLNLETNEVESLIKFENGAQVLLVGGNNIGR 193
Query: 127 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 186
VG++++ EKH SF+ HI+DA GH FATR+ NVF IG+G K +SL KGIKLS+I+E
Sbjct: 194 VGVLQHIEKHPSSFDIAHIKDAAGHSFATRVNNVFVIGEGKKSVISLLPAKGIKLSLIDE 253
Query: 187 ARKR 190
KR
Sbjct: 254 RNKR 257
>gi|389583604|dbj|GAB66338.1| 40S ribosomal protein S4, partial [Plasmodium cynomolgi strain B]
Length = 260
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 139/190 (73%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K+KLCK
Sbjct: 65 IQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +KF +G++VMVT
Sbjct: 125 VKKMILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTA 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG +KP++SLP+ KGIK
Sbjct: 185 GHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIK 244
Query: 181 LSIIEEARKR 190
L IIEE R +
Sbjct: 245 LDIIEERRNK 254
>gi|156098302|ref|XP_001615183.1| 40S ribosomal protein S4 [Plasmodium vivax Sal-1]
gi|148804057|gb|EDL45456.1| 40S ribosomal protein S4, putative [Plasmodium vivax]
Length = 261
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 139/190 (73%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q+ V VD K+RTD T+P G MDV+ I K+NE FRLLYD KGRF H I +EE+K+KLCK
Sbjct: 66 IQKIVKVDNKIRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + + + T+DGR+I Y P +K NDT++LDLET K+ E +KF +G++VMVT
Sbjct: 126 VKKMILRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTA 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + GRVGII + +K+ G+++ IH++D+ G FATRL NVF IG +KP++SLP+ KGIK
Sbjct: 186 GHSVGRVGIISSIDKNIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIK 245
Query: 181 LSIIEEARKR 190
L IIEE R +
Sbjct: 246 LDIIEERRNK 255
>gi|159114046|ref|XP_001707248.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
gi|157435352|gb|EDO79574.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
Length = 268
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
++VL+D K RTD T+P GFMDV IPK ++ FR+LYD KGRF L I+ EA FKLC+V+
Sbjct: 68 KNVLIDGKPRTDPTFPVGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAGFKLCRVQ 127
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
+ G KG+PY++T+D RTIR+P P IK NDTIK++L+T KI E+ KFD+G +VMVTGGR
Sbjct: 128 KIFLGDKGMPYLSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKIVMVTGGR 187
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
N GR+G I+ +KH GS+ I ++D G EF TRL NVF IG + P V++P KGI+
Sbjct: 188 NCGRIGTIQAIDKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPTTKGIRPD 246
Query: 183 IIEEARKR 190
II+ R
Sbjct: 247 IIKNRELR 254
>gi|308161402|gb|EFO63851.1| Ribosomal protein S4 [Giardia lamblia P15]
Length = 268
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
++VL+D K RTD T+P GFMDV IPK ++ FR+LYD KGRF L I+ EA FKLC+V+
Sbjct: 68 KNVLIDGKPRTDPTFPIGFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAGFKLCRVQ 127
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
+ G KG+PY++T+D RTIR+P P IK NDTIK++L+T KI E+ KFD+G +VMVTGGR
Sbjct: 128 KIFLGDKGMPYLSTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKIVMVTGGR 187
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
N GR+G I+ +KH GS+ I ++D G EF TRL NVF IG + P V++P KGI+
Sbjct: 188 NCGRIGTIQAIDKHMGSYTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPPTKGIRPD 246
Query: 183 IIEEARKR 190
II+ R
Sbjct: 247 IIKNRELR 254
>gi|145528524|ref|XP_001450056.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417656|emb|CAK82659.1| unnamed protein product [Paramecium tetraurelia]
Length = 816
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 136/188 (72%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD KVR+D YP G DV++I KT E++R+LYD +G+F L SI+ +EAKFKL KV
Sbjct: 621 NIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQ 680
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +PYI T D RTIRYP+P I NDT+K+DLET KI +FIK + GN+ + GG N
Sbjct: 681 KKVGPNNVPYIVTNDSRTIRYPNPEIHVNDTLKIDLETGKIVDFIKEEPGNICYIIGGNN 740
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+
Sbjct: 741 IGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTA 800
Query: 184 IEEARKRQ 191
+E+ + R+
Sbjct: 801 LEKKQARE 808
>gi|399949930|gb|AFP65586.1| 40S ribosomal protein S4 [Chroomonas mesostigmatica CCMP1168]
Length = 250
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 127/170 (74%)
Query: 11 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKG 70
+RT+K YP G MDV+S+ KTNENFRLLYDT GRF LH I +E+ FKLCK+ + GQ+G
Sbjct: 76 IRTEKNYPTGIMDVISLEKTNENFRLLYDTFGRFVLHRIEQKESFFKLCKIVKLTKGQRG 135
Query: 71 IPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGII 130
IPYI T+DGRT R+PDP +K NDTI +L KI +FIKFDVG++ ++TGG N GR+GI+
Sbjct: 136 IPYITTHDGRTCRFPDPFVKKNDTILFNLSEKKIIDFIKFDVGSLCLITGGNNIGRIGIV 195
Query: 131 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
+EK+ G E I ++D+ G EF +++ +F IGKG K ++SLPK KG++
Sbjct: 196 MQQEKNSGPAEMIRLKDSEGFEFFSKMSYIFVIGKGKKSFISLPKEKGLR 245
>gi|393912410|gb|EJD76721.1| 40S ribosomal protein S4, variant [Loa loa]
Length = 222
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 119/156 (76%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +PAGFMDV+ I +TNE FRLLYD KGR+ H I ++E FKLCK+
Sbjct: 67 QRLIKVDGKVRTDMRFPAGFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGNFKLCKI 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G KG+P+I T+D RTIRYPDP +K NDTI +D+ T K+++++KFD GN+ MVTGG
Sbjct: 127 VKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNLCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRL 157
RN GRVGI+ +REKH GSF+ +HI+DA GH FATR
Sbjct: 187 RNMGRVGIVGHREKHPGSFDIVHIKDAAGHSFATRF 222
>gi|56199522|gb|AAV84250.1| ribosomal protein S4 [Culicoides sonorensis]
Length = 211
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 116/146 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD +PAGFMDV++I KTNE FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 65 MQRLIKVDGKVRTDSNFPAGFMDVITIEKTNEYFRLIYDVKGRFTVHRISAEEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ G K +PY+ T+DGRTIR+PDPLIK NDT++LD+ T KIT+ IKF+ GN+ M+TG
Sbjct: 125 VKKTCVGPKKVPYLITHDGRTIRFPDPLIKINDTVQLDIATGKITDTIKFESGNLCMITG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQ 146
GRN GRVG + NREKH GSFE +HIQ
Sbjct: 185 GRNLGRVGTVMNREKHPGSFEIVHIQ 210
>gi|145475847|ref|XP_001423946.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391008|emb|CAK56548.1| unnamed protein product [Paramecium tetraurelia]
Length = 292
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 136/189 (71%), Gaps = 3/189 (1%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD KVRTD YP G DV++I KT E++R+LYD +G+F L SI+ EEAKFKL KV
Sbjct: 98 NIKVDGKVRTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEEAKFKLVKVTQ 157
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +PYI T D RTIRYP+P I NDT+K+DLE+ K+ EF+K + GN+ + GG N
Sbjct: 158 KKVGPNNVPYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPGNLCYIIGGNN 217
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+
Sbjct: 218 IGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTA 277
Query: 184 IEEARKRQA 192
+E K+QA
Sbjct: 278 LE---KKQA 283
>gi|209879451|ref|XP_002141166.1| 40S ribosomal protein S4 [Cryptosporidium muris RN66]
gi|209556772|gb|EEA06817.1| 40S ribosomal protein S4, putative [Cryptosporidium muris RN66]
Length = 261
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 134/186 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD +P G MDV++I + N+N R++YDTKGRF + +EA++KLCK
Sbjct: 66 MQRLIKVDGKVRTDTCFPLGLMDVITIDRINKNMRIMYDTKGRFVPVQVSSKEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V G KG+P T D RT+RY P I+ANDT+K+DLET K+ EFIK +VGN+ VTG
Sbjct: 126 VTRVALGPKGVPTATTNDARTLRYIHPEIRANDTVKIDLETGKVMEFIKCEVGNLCTVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GR++GRVG+I + E+ +G+ + ++D GH FAT + N+F +G+G K V+LPK KGI+
Sbjct: 186 GRSQGRVGVITHLERKQGAQCIVSVRDKKGHTFATLIKNIFVLGEGDKSLVTLPKDKGIR 245
Query: 181 LSIIEE 186
LS +E+
Sbjct: 246 LSNVED 251
>gi|145488765|ref|XP_001430386.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397483|emb|CAK62988.1| unnamed protein product [Paramecium tetraurelia]
Length = 290
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 136/189 (71%), Gaps = 3/189 (1%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD KVRTD YP G DV++I KT E++R+LYD +G+F L SI+ EEAKFKL KV
Sbjct: 96 NIKVDGKVRTDSGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEEAKFKLVKVTQ 155
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +PYI T D RTIRYP+P I NDT+K+DLE+ K+ EF+K + GN+ + GG N
Sbjct: 156 KKVGPNNVPYIVTNDARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPGNLCYIIGGNN 215
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+
Sbjct: 216 IGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTA 275
Query: 184 IEEARKRQA 192
+E K+QA
Sbjct: 276 LE---KKQA 281
>gi|324508881|gb|ADY43745.1| 40S ribosomal protein S4 [Ascaris suum]
Length = 221
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 119/155 (76%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRT+ +PAGFMDV++I KTNE FRLLYD KGR+ +H I + E +FKLCKV
Sbjct: 67 QRLIKIDGKVRTEMRFPAGFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGRFKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G KG+P+I T+D RTIRYPDP +K NDTI LD+ + K +++KFD GN+ MVTGG
Sbjct: 127 VKKSVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNLCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 156
RN GRVG++ +REKH GSF+ +H++DA GH FATR
Sbjct: 187 RNMGRVGVVGHREKHPGSFDIVHVKDAAGHTFATR 221
>gi|410043724|ref|XP_003951666.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pan
troglodytes]
Length = 153
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 116/153 (75%)
Query: 22 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 81
MDV+SI K ENF L+YDTK F +H I E AK+KLCKVR + G KGIP++ T+D T
Sbjct: 1 MDVISIDKMRENFCLIYDTKSCFDVHLITPEVAKYKLCKVRKIFVGTKGIPHLVTHDAHT 60
Query: 82 IRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
I Y DPLIK NDTI++DLET KIT+FIKFD G + MVTGG N R+G+I NRE+H GSF+
Sbjct: 61 IHYLDPLIKVNDTIQIDLETGKITDFIKFDAGKLCMVTGGANLERIGVITNRERHPGSFD 120
Query: 142 TIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
+H++DA G+ FA RL N+F IGKG KPW+SLP
Sbjct: 121 VVHVKDANGNSFAARLSNIFVIGKGNKPWISLP 153
>gi|145500014|ref|XP_001435991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403128|emb|CAK68594.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 137/188 (72%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD KVR+D YP G DV++I KT E++R+LYD +G+F L SI+ +EAKFKL KV
Sbjct: 63 NIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQ 122
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +PYI T DGRTIRYP+P I NDT+K++LET KI +F+K + GN+ + GG N
Sbjct: 123 KKVGPNNVPYIVTNDGRTIRYPNPEIHVNDTLKIELETGKIVDFLKEEPGNLCYIIGGNN 182
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+
Sbjct: 183 IGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTA 242
Query: 184 IEEARKRQ 191
+E+ + R+
Sbjct: 243 LEKKQARE 250
>gi|253741437|gb|EES98307.1| Ribosomal protein S4 [Giardia intestinalis ATCC 50581]
Length = 267
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 134/189 (70%), Gaps = 1/189 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
++VL+D K R D T+P GFMDV IPK ++ FR+LYD KGRF L I+ EA FKLC+V
Sbjct: 67 DKNVLIDNKPRIDPTFPIGFMDVFEIPKVHKVFRVLYDVKGRFTLIPIQSNEAGFKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ + G KG+PY+ T+D RTIR+P P IK NDTIK++L+T KI E+ KFD+G VVMVTGG
Sbjct: 127 QKIFLGDKGMPYLVTHDARTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKVVMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GR+G I+ +KH GS+ I ++D+ G EF TRL NVF IG + P V++P KGI+
Sbjct: 187 RNCGRIGTIQAIDKHMGSYTMIRMKDSEGAEFITRLCNVFIIGNDS-PAVTVPSTKGIRP 245
Query: 182 SIIEEARKR 190
II+ R
Sbjct: 246 DIIKNRELR 254
>gi|145499397|ref|XP_001435684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402818|emb|CAK68287.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 136/188 (72%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD KVR+D YP G DV++I KT E++R+LYD +G+F L SI+ +EAKFKL KV
Sbjct: 94 NIKVDGKVRSDFGYPVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQ 153
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +PYI T D RTIRYP+P I NDT+K+DLET K+ +F+K + GN+ + GG N
Sbjct: 154 KKVGPNNVPYIVTSDARTIRYPNPDIHVNDTLKIDLETGKVVDFLKEEPGNLCYIIGGNN 213
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVG+I++RE+H GSF+ +H++D+ G F+TR+ N+FTIGKG K +SLP G+ L+
Sbjct: 214 IGRVGLIQHRERHLGSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTA 273
Query: 184 IEEARKRQ 191
+E+ + R+
Sbjct: 274 LEKKQARE 281
>gi|431916529|gb|ELK16507.1| Contactin-5, partial [Pteropus alecto]
Length = 713
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
Query: 23 DVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 82
DV+SI KT ENF +YDTKG F +H I EEAK+KLCK+R + G+K + ++ T+D TI
Sbjct: 347 DVISIDKTRENFLQIYDTKGLFAVH-ITPEEAKYKLCKMRKIFVGRKELLHLVTHDAGTI 405
Query: 83 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 142
R PDPLIK NDTI++DLET KI EFIKFD N+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 406 RCPDPLIKVNDTIQIDLETEKIIEFIKFDTDNLFMVTGGDNLGRIGVITNRERHPGSFDL 465
Query: 143 IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
+H++DA G+ FAT L N+F IGKG KPW+SLP GK
Sbjct: 466 VHVKDANGNNFATWLSNIFVIGKGNKPWISLPHGK 500
>gi|160550143|gb|ABX44776.1| putative 40S ribosomal protein RPS4 [Flustra foliacea]
Length = 214
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 116/149 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+PAGFMDV+SI KT+ENFRL+YD KGRF +H I EEA +KLCK
Sbjct: 66 MQRLIKVDNKVRTDLTFPAGFMDVISIEKTSENFRLIYDVKGRFAIHRITAEEATYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V G KG+PY+ T+DGRTIRYPDPL+K NDTI+++ +T KI +FIKF+ GN+ M+TG
Sbjct: 126 VAKQCTGPKGVPYVTTHDGRTIRYPDPLVKVNDTIQVNTQTGKIMDFIKFEGGNMCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDAL 149
G N GRVG I + EKH GSF H++DAL
Sbjct: 186 GHNIGRVGQIVHVEKHPGSFHIGHVKDAL 214
>gi|323508791|dbj|BAJ77289.1| cgd7_4760 [Cryptosporidium parvum]
gi|323510165|dbj|BAJ77976.1| cgd7_4760 [Cryptosporidium parvum]
Length = 261
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 129/186 (69%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD +P G MDVVSI + +N R++YDTKGRF I +EA FKLCK
Sbjct: 66 MQRLIKVDGKVRTDICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V G KGIP T D RT+RY P +KANDT+K+DL T K+ +F+K +VGN+ MVTG
Sbjct: 126 VTKVALGAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNMCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GR++GRVG I + E+ G+ + I+D G FAT + N+F IG+ KP V+LPK KGI+
Sbjct: 186 GRSQGRVGTITHFERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPKDKGIR 245
Query: 181 LSIIEE 186
LS +E+
Sbjct: 246 LSNVED 251
>gi|330038406|ref|XP_003239588.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
gi|327206512|gb|AEA38690.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
Length = 242
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 127/174 (72%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q+ + VD KVRT K YP G MD++SI KT E FRLLYD+ G F LH I E+ K+CKV
Sbjct: 67 QKMIYVDGKVRTQKNYPVGIMDIISIKKTKEIFRLLYDSIGSFTLHRIGKNESSIKICKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
SV+ G GIPYI T+DGRTIRYPDP+IK+ND++ ++ KI +FIKFD+G++ +VTGG
Sbjct: 127 ISVKIGNMGIPYIVTHDGRTIRYPDPVIKSNDSVIFNIFKKKIIDFIKFDIGSLCIVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
N G+VGII +EK+ + E I++++ ++F T++ NVF IGKG K ++SLPK
Sbjct: 187 YNTGKVGIIYYKEKYYNNQEMIYLKNFEENQFFTKISNVFIIGKGNKSFISLPK 240
>gi|126654348|ref|XP_001388411.1| ribosomal protein S4 [Cryptosporidium parvum Iowa II]
gi|126117504|gb|EAZ51604.1| ribosomal protein S4, putative [Cryptosporidium parvum Iowa II]
Length = 260
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 129/186 (69%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD +P G MDVVSI + +N R++YDTKGRF I +EA FKLCK
Sbjct: 65 MQRLIKVDGKVRTDICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V G KGIP T D RT+RY P +KANDT+K+DL T K+ +F+K +VGN+ MVTG
Sbjct: 125 VTKVALGAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNMCMVTG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GR++GRVG I + E+ G+ + I+D G FAT + N+F IG+ KP V+LPK KGI+
Sbjct: 185 GRSQGRVGTITHFERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPKDKGIR 244
Query: 181 LSIIEE 186
LS +E+
Sbjct: 245 LSNVED 250
>gi|432102129|gb|ELK29938.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 183
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 123/162 (75%), Gaps = 2/162 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + ++ KV+TD TYPAGF+DV+SI KT EN RL+YDTK RF +H R EEAK+KLCK
Sbjct: 1 MQWFIEINGKVQTDVTYPAGFVDVISIDKTGENVRLVYDTKSRFAVHR-RPEEAKYKLCK 59
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T D RTIRYP+PLIK NDTI++DLE+ KIT+FI D G + M+T
Sbjct: 60 VRKIFMGTKGIPHLVTQDARTIRYPEPLIKVNDTIQIDLESGKITDFITLDTGKLCMITR 119
Query: 121 GRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVF 161
G N G++G+I +REKH GSF+ I H++ A G+ FAT L N+F
Sbjct: 120 GANLGKIGVITDREKHPGSFDIIVHVKYATGNSFATLLSNIF 161
>gi|414884607|tpg|DAA60621.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 109/145 (75%), Gaps = 19/145 (13%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD K+ S P + T G FRL+ I+DE+AKF LCK
Sbjct: 228 MQRHVLVDGKM--------------SFPSLRQT-----RTTGCFRLYPIKDEDAKFMLCK 268
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR +QFGQKGIPY+NTYD RTIRYPDPLIKANDTI +DLETNKI +FIKFDVGNV+MVTG
Sbjct: 269 VRPIQFGQKGIPYMNTYDDRTIRYPDPLIKANDTITIDLETNKIMDFIKFDVGNVIMVTG 328
Query: 121 GRNRGRVGIIKNREKHKGSFETIHI 145
GRN GRVG+IKNREKHK SFETIH+
Sbjct: 329 GRNTGRVGVIKNREKHKSSFETIHV 353
>gi|440904091|gb|ELR54652.1| hypothetical protein M91_21175, partial [Bos grunniens mutus]
Length = 130
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 107/130 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 1 MQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAKYKLCK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 61 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120
Query: 121 GRNRGRVGII 130
G N GR+G+I
Sbjct: 121 GANLGRIGVI 130
>gi|332213865|ref|XP_003256051.1| PREDICTED: 40S ribosomal protein S4, Y isoform 2-like [Nomascus
leucogenys]
Length = 170
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 109/143 (76%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+KLCKVR + G KGIP++ T+D RTIRYPDPLIK N+T+++DL T KIT FIKFD GNV
Sbjct: 28 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNNTVQIDLGTGKITSFIKFDTGNV 87
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
MV GG N GRVG++ NRE+H GS +H++DA G+ FATR+ N+F IG G KPW+SLP+
Sbjct: 88 CMVIGGANLGRVGVVTNRERHPGSCNVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 147
Query: 176 GKGIKLSIIEEARKRQALATSAA 198
GKGI+L+I EE KR A S+
Sbjct: 148 GKGIRLTIAEEREKRLAAKQSSG 170
>gi|414587746|tpg|DAA38317.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 193
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 110/145 (75%), Gaps = 19/145 (13%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ +VLVD K+ S P + T G FRLH IRDE+AKFKLCK
Sbjct: 60 MQHYVLVDGKM--------------SFPSLRQ-----MRTTGFFRLHPIRDEDAKFKLCK 100
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTY+ TIRYPD LIKANDTIK++LETNKI +FIKFDVGNVVMVTG
Sbjct: 101 VRSIQFGQKGIPYLNTYNDCTIRYPDLLIKANDTIKIELETNKIMDFIKFDVGNVVMVTG 160
Query: 121 GRNRGRVGIIKNREKHKGSFETIHI 145
GRN GRVG+IKN+EKHKGSFETIH+
Sbjct: 161 GRNTGRVGVIKNKEKHKGSFETIHV 185
>gi|123376214|ref|XP_001297934.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|123468788|ref|XP_001317610.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154417078|ref|XP_001581560.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|154420837|ref|XP_001583433.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121878306|gb|EAX85004.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121900348|gb|EAY05387.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121915788|gb|EAY20574.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
gi|121917674|gb|EAY22447.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 126/184 (68%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R V VD KVRT+ YP G MDV+ + K+NE FR++YD KGRF +H I +EA FKL +V
Sbjct: 67 RRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G KGIP++ T+DGRTI Y DP ++ +D +K +++T ++ IKF VG+V MVT G
Sbjct: 127 NQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+ P +SLP +G++
Sbjct: 187 GNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRP 246
Query: 182 SIIE 185
SI+E
Sbjct: 247 SILE 250
>gi|123477532|ref|XP_001321933.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121904769|gb|EAY09710.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 269
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 126/184 (68%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R V VD KVRT+ YP G MDV+ + K+NE FR++YD KGRF +H I +EA FKL +V
Sbjct: 81 RRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRV 140
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G KGIP++ T+DGRTI Y DP ++ +D +K +++T ++ IKF VG+V MVT G
Sbjct: 141 NQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAG 200
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+ P +SLP +G++
Sbjct: 201 GNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRP 260
Query: 182 SIIE 185
SI+E
Sbjct: 261 SILE 264
>gi|123439290|ref|XP_001310418.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
gi|121892187|gb|EAX97488.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
Length = 255
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 126/184 (68%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R V VD KVRT+ YP G MDV+ + K+NE FR++YD KGRF +H I +EA FKL +V
Sbjct: 67 RRLVKVDGKVRTNYRYPTGLMDVIGLGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G KGIP++ T+DGRTI Y DP ++ +D +K +++T ++ IKF VG+V MVT G
Sbjct: 127 NQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+ P +SLP +G++
Sbjct: 187 GNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRP 246
Query: 182 SIIE 185
SI+E
Sbjct: 247 SILE 250
>gi|162606302|ref|XP_001713181.1| 40S ribosomal protein S4 [Guillardia theta]
gi|4583659|emb|CAB40397.1| 40S ribosomal protein S4 [Guillardia theta]
Length = 257
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 125/179 (69%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+ + VD KVR DK +PAG MDV+SI T EN+R+LYD G F LH I +E+ FKLCKV
Sbjct: 67 KNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
V G KGIPYI T+DGRTIR+P+ LIK+ND+I LDL NK+ +FIKF +G++ +V G
Sbjct: 127 IRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
N GR+G+ N +GS + ++D G F+T+ N+F IGKGTK ++SLP+ +G++
Sbjct: 187 SNIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLR 245
>gi|414884904|tpg|DAA60918.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 361
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 110/152 (72%), Gaps = 10/152 (6%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPK----TNENFRLLYDTKGRFRLHS---IRDEE 53
MQ HVLVD KV TDKTYPAGFMD + T R+ G+F S + E
Sbjct: 205 MQHHVLVDGKVTTDKTYPAGFMDKRELQAASVFTQSGMRM--PRLGQFSYTSSLIVLVEH 262
Query: 54 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 113
C VRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLETNKI +FIKFDV
Sbjct: 263 DDLGSC-VRSVQFGQKGIPYLNTYDDRTILYPDPLIKANDTIKIDLETNKIMDFIKFDVD 321
Query: 114 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
NVVMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 322 NVVMVTGKRNTGRVGVIKNREKHKGSFETIHV 353
>gi|82393859|gb|ABB72228.1| ribosomal protein S4 X-linked [Bos taurus]
Length = 127
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/123 (71%), Positives = 103/123 (83%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
+D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCKVR +
Sbjct: 4 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFV 63
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 126
G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR
Sbjct: 64 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 123
Query: 127 VGI 129
+G+
Sbjct: 124 IGV 126
>gi|413944948|gb|AFW77597.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 271
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/106 (83%), Positives = 96/106 (90%)
Query: 40 TKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 99
T G FRLH IRDE+AKF LCKV SVQFGQKGIPY+NTY RTIRYPDPLIKANDT K+DL
Sbjct: 158 TIGCFRLHPIRDEDAKFMLCKVGSVQFGQKGIPYLNTYGDRTIRYPDPLIKANDTNKIDL 217
Query: 100 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
ETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 218 ETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 263
>gi|379072624|gb|AFC92944.1| ribosomal protein S4, X-linked, partial [Pipa carvalhoi]
Length = 129
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 106/128 (82%)
Query: 69 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 128
KGIP++ T+D RTIRYPDPLIK NDT+++DLET KIT+FIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 129 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAR 188
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERD 121
Query: 189 KRQALATS 196
KR A S
Sbjct: 122 KRLAAKQS 129
>gi|379072626|gb|AFC92945.1| ribosomal protein S4, X-linked, partial [Rhinophrynus dorsalis]
Length = 129
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 105/128 (82%)
Query: 69 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 128
KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GRVG
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRVG 61
Query: 129 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAR 188
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERG 121
Query: 189 KRQALATS 196
KR A S
Sbjct: 122 KRLAAKQS 129
>gi|297694118|ref|XP_002824341.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pongo abelii]
Length = 134
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 108/134 (80%)
Query: 22 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 81
M+V+SI KT ENF L+YDTK F +H I EEAK+KLCKVR + G KGIP++ T+DGRT
Sbjct: 1 MEVISIDKTEENFCLIYDTKSLFAVHHITPEEAKYKLCKVRKIFLGTKGIPHLVTHDGRT 60
Query: 82 IRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
I YPDPLIK NDTI++DLET+KIT+FIKFD G++ MVTG N GR+G+I NRE+H GSF+
Sbjct: 61 IHYPDPLIKVNDTIQIDLETSKITDFIKFDTGHLCMVTGSANLGRIGVITNRERHPGSFD 120
Query: 142 TIHIQDALGHEFAT 155
IH++DA G+ FAT
Sbjct: 121 IIHMKDANGNSFAT 134
>gi|379072628|gb|AFC92946.1| ribosomal protein S4, X-linked, partial [Hymenochirus curtipes]
Length = 129
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 105/128 (82%)
Query: 69 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 128
KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G
Sbjct: 2 KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61
Query: 129 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAR 188
+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+L+I EE
Sbjct: 62 VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 121
Query: 189 KRQALATS 196
KR A S
Sbjct: 122 KRLAAKQS 129
>gi|413948238|gb|AFW80887.1| hypothetical protein ZEAMMB73_153699 [Zea mays]
Length = 377
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 107/145 (73%), Gaps = 19/145 (13%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ HVLVD K M S+ +T T G FRLH IRDE+AKFKL K
Sbjct: 244 MQHHVLVDGK-----------MSFPSLRQTR--------TTGCFRLHPIRDEDAKFKLYK 284
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQK IPY+NTYD RTIRYPDPLIKANDTIK+DLETNKI +FI FDVGNVVMV G
Sbjct: 285 VRSVQFGQKDIPYLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIMFDVGNVVMVIG 344
Query: 121 GRNRGRVGIIKNREKHKGSFETIHI 145
RN GRVG+IK REKHKG+FETIH+
Sbjct: 345 RRNTGRVGVIKIREKHKGNFETIHV 369
>gi|344244607|gb|EGW00711.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 187
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 105/136 (77%), Gaps = 4/136 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT + FRL+YDTKG F +H I EEAK+K CK
Sbjct: 48 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGQKFRLIYDTKGHFAVHRITPEEAKYKWCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIPY+ ++D RTIRYPDPLIK NDTI++DLET IKFD GN+ MVTG
Sbjct: 108 VRKIFVGTKGIPYLVSHDARTIRYPDPLIKVNDTIQIDLETGA----IKFDTGNLCMVTG 163
Query: 121 GRNRGRVGIIKNREKH 136
G N GR+G+I NRE+H
Sbjct: 164 GANLGRIGVITNRERH 179
>gi|255641952|gb|ACU21243.1| unknown [Glycine max]
Length = 123
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/103 (86%), Positives = 94/103 (91%)
Query: 97 LDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 156
LDLE+NKIT+FIKFDVGNVVMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR
Sbjct: 21 LDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATR 80
Query: 157 LGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAAA 199
+GNVF IGKGTKPWVSLPKGKGIKLSIIEEARKR A A
Sbjct: 81 MGNVFIIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQNETVA 123
>gi|355703406|gb|EHH29897.1| hypothetical protein EGK_10441, partial [Macaca mulatta]
Length = 245
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 119/175 (68%), Gaps = 5/175 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + VD K+RTD P MDV+SI K E+F L+Y RF LH I EE K+KLCK
Sbjct: 76 MQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCK 135
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+R + KGIP++ +D T+R+PD LIK NDTI++DLET KIT +KFD GN+ +VTG
Sbjct: 136 MRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTG 194
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
G N GR+G+I NRE+H SF+T H++DA + F+ +F I KG KPW+SLP+
Sbjct: 195 GANWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLPR 245
>gi|291410370|ref|XP_002721473.1| PREDICTED: ribosomal protein S4, X-linked-like [Oryctolagus
cuniculus]
Length = 291
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
+ V+T YPAGF+DV+S K ENF L DTKG F +H I EEAK+KLCKVR +
Sbjct: 101 ISWDVQTGTCYPAGFVDVMSFDKIRENFCLTCDTKGHFAVHCIIPEEAKYKLCKVRKILV 160
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 126
G KGI + T+D TI YP LIK TI DLE K+T+ D ++ MV G GR
Sbjct: 161 GTKGILHCVTHDAPTIGYPHTLIKVKGTIPTDLEAGKVTDITTSDTNSLCMVPGDATLGR 220
Query: 127 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 186
G++ NRE+H GSF+ + I DA G FAT+L N+FT GKG KPW SL +G+GI L+ EE
Sbjct: 221 TGVVTNRERHPGSFDVVDINDANGSSFATQLANIFT-GKGNKPWTSLHQGRGICLTFAEE 279
Query: 187 ARKRQALATSAA 198
R+A S+
Sbjct: 280 RDGRRAARQSSG 291
>gi|109124282|ref|XP_001109776.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Macaca
mulatta]
Length = 244
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 118/174 (67%), Gaps = 5/174 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + VD K+RTD P MDV+SI K E+F L+Y RF LH I EE K+KLCK
Sbjct: 76 MQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCK 135
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+R + KGIP++ +D T+R+PD LIK NDTI++DLET KIT +KFD GN+ +VTG
Sbjct: 136 MRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTG 194
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G N GR+G+I NRE+H SF+T H++DA + F+ +F I KG KPW+SLP
Sbjct: 195 GGNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>gi|323332828|gb|EGA74232.1| Rps4ap [Saccharomyces cerevisiae AWRI796]
Length = 203
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 101/122 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 82 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 141
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 142 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 201
Query: 121 GR 122
GR
Sbjct: 202 GR 203
>gi|342906104|gb|AEL79335.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 132
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 106/131 (80%)
Query: 60 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
KV+ VQ G +GIP++ T+DGRTIRYPDPL K NDTI+LD+ T+KI + I+ D GN+ M+T
Sbjct: 2 KVKKVQTGPRGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMIT 61
Query: 120 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGI 179
GGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG+K +VSLPKGKG+
Sbjct: 62 GGRNLGRVGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGV 121
Query: 180 KLSIIEEARKR 190
KLSI EE KR
Sbjct: 122 KLSIAEERDKR 132
>gi|397518940|ref|XP_003829632.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Pan paniscus]
Length = 270
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 124/199 (62%), Gaps = 5/199 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVR TYPAGF DV+ I KT E+F L+ D KG + + EEAK+ LCK
Sbjct: 66 MQCFIKIDGKVRVAITYPAGFTDVIGI-KTGEHFCLVCDXKGCSAVDRVTVEEAKYNLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR V G KGI + T+D TI YPDP+IK N+T++ DL T KI F KF GN MV G
Sbjct: 125 VRKVTMGMKGIQRLVTHDTGTIHYPDPVIKVNNTVQTDLGTGKIINFSKFHTGNACMVIG 184
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G + VG+ NRE H GS H++DA G+ FA RL N+F G+KPW+SLP+GKG +
Sbjct: 185 GASLRHVGVT-NREGHPGSLNVGHVRDANGNSFALRLSNIFVTANGSKPWISLPRGKGTR 243
Query: 181 LSIIEEAR---KRQALATS 196
L+ E R K+Q L +
Sbjct: 244 LAEKREKRLVTKQQWLNCT 262
>gi|183233913|ref|XP_001913934.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
gi|169801348|gb|EDS89291.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449701849|gb|EMD42590.1| 40S ribosomal protein S4 [Entamoeba histolytica KU27]
Length = 197
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 104/142 (73%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AKFKLCK+
Sbjct: 49 NRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKI 108
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G IPYI T+DGRTIRYP P ++ANDTIKL+LET KI +F+KFD+GN M+ GG
Sbjct: 109 EKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGG 168
Query: 122 RNRGRVGIIKNREKHKGSFETI 143
GRVG+I RE H GSFE I
Sbjct: 169 NGMGRVGVIVKREVHPGSFEII 190
>gi|431915230|gb|ELK15917.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 204
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 106/140 (75%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D +V TD TYPAGFMD +SI KT ENFRL+YDTKG F +H I EEAK+KLCK
Sbjct: 48 MQRFIKIDGQVWTDVTYPAGFMDDISIDKTGENFRLVYDTKGCFPVHQITSEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T TIRY +PLIK NDTI++ LET +IT+FIKFD GN+ VTG
Sbjct: 108 VRKIFVGTKGIPHLVTDGAHTIRYSNPLIKVNDTIQIYLETGEITDFIKFDTGNMHTVTG 167
Query: 121 GRNRGRVGIIKNREKHKGSF 140
G N G++G+I NRE+H GS
Sbjct: 168 GANLGKIGVITNRERHPGSL 187
>gi|222064029|emb|CAQ86677.1| putative ribosomal protein L18 [Histomonas meleagridis]
Length = 172
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 117/164 (71%)
Query: 22 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 81
MDV+ + K+NE FRLLYD KGRF H I +EA+FKL ++ G++G+P++ +DG T
Sbjct: 1 MDVIELGKSNEQFRLLYDAKGRFVAHKIEPKEAEFKLLRINKYFIGERGVPHLVAHDGHT 60
Query: 82 IRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
+RY DP I+ NDT+K +L+T+++ FIKF+ GNV MVT G N GRVG+I++ E F
Sbjct: 61 LRYVDPSIRMNDTVKYNLKTHEVDNFIKFEKGNVAMVTSGGNVGRVGVIQSIEPQMVGFS 120
Query: 142 TIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIE 185
+HI+DA G EFATR+ NVF IG+G P +SLP+ G++ SI+E
Sbjct: 121 IVHIKDASGAEFATRIPNVFVIGQGENPLISLPRRAGVRPSILE 164
>gi|71755051|ref|XP_828440.1| 40s ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|71755053|ref|XP_828441.1| 40S ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802195|pdb|3ZEY|1 Chain 1, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833826|gb|EAN79328.1| 40s ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|70833827|gb|EAN79329.1| 40S ribosomal protein S4, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 273
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + E+ K+ KV +V
Sbjct: 67 VCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMKVVNV 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
G IP T+DG IRYPDP DT+ D++ K+ + IK G VVMVTGG NR
Sbjct: 127 YTGTGRIPVAVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I + E+H G+F+ ++DA GHEFATR N+F IGK V+LPK +G+++++
Sbjct: 187 GRIGEIVSIERHPGAFDIARLKDASGHEFATRATNIFVIGKDMSSVPVTLPKQQGLRINV 246
Query: 184 IEE 186
I+E
Sbjct: 247 IQE 249
>gi|414588932|tpg|DAA39503.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 143
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/106 (80%), Positives = 91/106 (85%)
Query: 40 TKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 99
T G FRLH IRDE+ KFKLCKVRSVQFGQ GIPY+NTYDG TIRYPDPLIKAND IK+DL
Sbjct: 30 TTGCFRLHPIRDEDIKFKLCKVRSVQFGQTGIPYLNTYDGHTIRYPDPLIKANDNIKIDL 89
Query: 100 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
ETNKI +F KFDVGNVVMVT GRN RVG+IKN EKHKGSFE I +
Sbjct: 90 ETNKIMDFFKFDVGNVVMVTDGRNTERVGVIKNWEKHKGSFEVIDV 135
>gi|343473039|emb|CCD14964.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+ KV
Sbjct: 5 QGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMKV 64
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+V G IP T+DG IRYPDP DT+ D++ K+T+ IK G VVMVTGG
Sbjct: 65 VNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTGG 124
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIK 180
NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK V+LPK G++
Sbjct: 125 ANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGLR 184
Query: 181 LSIIEE 186
++I E
Sbjct: 185 KNVIVE 190
>gi|342185473|emb|CCC94956.1| putative 40S ribosomal protein S4 [Trypanosoma congolense IL3000]
Length = 273
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+ KV
Sbjct: 64 QGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMKV 123
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+V G IP T+DG IRYPDP DT+ D++ K+T+ IK G VVMVTGG
Sbjct: 124 VNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTGG 183
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIK 180
NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK V+LPK G++
Sbjct: 184 ANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGLR 243
Query: 181 LSIIEE 186
++I E
Sbjct: 244 KNVIVE 249
>gi|71415246|ref|XP_809696.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71415254|ref|XP_809700.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|71653417|ref|XP_815346.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
gi|2981290|gb|AAC38966.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|2981292|gb|AAC38967.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
gi|70874118|gb|EAN87845.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70874122|gb|EAN87849.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|70880395|gb|EAN93495.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
gi|83375600|gb|ABC17643.1| ribosomal protein S4 copy 1 [Trypanosoma cruzi]
gi|83375601|gb|ABC17644.1| ribosomal protein S4 copy 2 [Trypanosoma cruzi]
gi|83375604|gb|ABC17646.1| ribosomal protein S4 copy 3 [Trypanosoma cruzi]
gi|205278880|gb|ACI02315.1| ribosomal protein S4-like protein [Trypanosoma cruzi]
gi|407852324|gb|EKG05879.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
Length = 273
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD K R D YP GFMDVV IP+T + FR+LYD KGRF L + + E KL KV +V
Sbjct: 67 VCVDGKPRKDTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLKVENV 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
IP T+DG IRYPDP DT+ +L+ K+ + IK G VVMVTGG NR
Sbjct: 127 YTSTGRIPVAMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I + E+H G+F+ ++DA GHEFATR N+F IGK + V+LPK +G+++++
Sbjct: 187 GRIGEIMSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGLRINV 246
Query: 184 IEEARKRQALATSA 197
I+E R+ + +A A
Sbjct: 247 IQE-REEKLIAAEA 259
>gi|343473038|emb|CCD14963.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 307
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + EA K+ KV
Sbjct: 98 QGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMKV 157
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+V G IP T+DG IRYPDP DT+ D++ K+T+ IK G VVMVTGG
Sbjct: 158 VNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTGG 217
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIK 180
NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK V+LPK G++
Sbjct: 218 ANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGLR 277
Query: 181 LSIIEE 186
++I E
Sbjct: 278 KNVIVE 283
>gi|431917973|gb|ELK17202.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 258
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 118/198 (59%), Gaps = 36/198 (18%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D +V+TD TYPAGFMDV+SI K EN+ LL DTKG F + I EEAK KLCK
Sbjct: 97 MQRFIKIDGQVQTDVTYPAGFMDVISIDKIRENYCLLCDTKGHFTVREITTEEAKHKLCK 156
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ DLET KIT+FIKFD GN+ MVTG
Sbjct: 157 I------------------------------------DLETGKITDFIKFDTGNLCMVTG 180
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
N GR+G+I NRE+H GS + +H++DA G+ FATRL N+F IGKG +SLP GKGI
Sbjct: 181 SANLGRIGVITNRERHPGSCDVVHVKDANGNSFATRLSNIFVIGKGNNQGISLPCGKGIH 240
Query: 181 LSIIEEARKRQALATSAA 198
L+I ++ KR A S+
Sbjct: 241 LTIAKDRDKRLAAKQSSG 258
>gi|261334297|emb|CBH17291.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
gi|261334298|emb|CBH17292.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
DAL972]
Length = 273
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 119/183 (65%), Gaps = 1/183 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD K R D YPAGFMDVV IPKT + FR+LYD KGRF L + + E+ K+ KV +V
Sbjct: 67 VCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMKVVNV 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
G IP T+DG IRYPDP DT+ D++ K+ + IK G VVMVTGG NR
Sbjct: 127 YTGTGRIPVAVTHDGHRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I + E+H G+F+ ++DA GHEFATR N+F IG V+LPK +G+++++
Sbjct: 187 GRIGEIVSIERHPGAFDIARLKDASGHEFATRATNIFVIGNDMSSVPVTLPKQQGLRINV 246
Query: 184 IEE 186
I+E
Sbjct: 247 IQE 249
>gi|413948199|gb|AFW80848.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 225
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 89/93 (95%)
Query: 51 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
D +A FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKF
Sbjct: 118 DHKAHFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 177
Query: 111 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 143
DVGNVVMVTGGRN GRVG+IKNREKHKGSFETI
Sbjct: 178 DVGNVVMVTGGRNTGRVGVIKNREKHKGSFETI 210
>gi|407412707|gb|EKF34479.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi marinkellei]
Length = 273
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD K R D YP GFMDVV IP+T + FR+LYD KGRF L + + E KL KV +V
Sbjct: 67 VCVDGKPRKDTKYPVGFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLKVVNV 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
IP T+DG IRYPDP DT+ +L+ K+ + IK G VVMVTGG NR
Sbjct: 127 YTSTGRIPVAMTHDGHRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I + E+H G+F+ ++DA GHEFATR N+F IGK + V+LPK +G+++++
Sbjct: 187 GRIGEIMSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGLRINV 246
Query: 184 IEEARKRQALATSA 197
I+E R+ + +A A
Sbjct: 247 IQE-REEKLIAAEA 259
>gi|242052939|ref|XP_002455615.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
gi|241927590|gb|EES00735.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
Length = 129
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/115 (77%), Positives = 97/115 (84%), Gaps = 12/115 (10%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
HVLVD K RTDKTY GFMDV+SIPKT EN+R+LYDTKGRFRLHS+RDE+AKF
Sbjct: 26 HVLVDGKFRTDKTY--GFMDVISIPKTGENYRILYDTKGRFRLHSVRDEDAKF------- 76
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMV 118
GQKGIPY+NTYDGRTIRYPDPLIKANDTIK+ L TNKI +FIKFDVGNVVMV
Sbjct: 77 ---GQKGIPYLNTYDGRTIRYPDPLIKANDTIKIYLVTNKIVDFIKFDVGNVVMV 128
>gi|413925809|gb|AFW65741.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 140
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/92 (88%), Positives = 86/92 (93%)
Query: 54 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 113
+FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI FDVG
Sbjct: 41 VQFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVG 100
Query: 114 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
NVVMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 101 NVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 132
>gi|414589886|tpg|DAA40457.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 190
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 88/93 (94%)
Query: 51 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
D +A FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKF
Sbjct: 83 DHKAHFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 142
Query: 111 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 143
DVGNVVMVTGGRN RVG+IKNREKHKGSFETI
Sbjct: 143 DVGNVVMVTGGRNTRRVGVIKNREKHKGSFETI 175
>gi|355428416|gb|AER92524.1| hypothetical protein, partial [Triatoma rubida]
Length = 133
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 105/133 (78%), Gaps = 2/133 (1%)
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 126
G + IP++ T+DGRTIRYPDPL K NDTI+LD+ T+KI + I+ D GN+ M+TGGRN GR
Sbjct: 2 GAERIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMITGGRNLGR 61
Query: 127 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 186
VG + NRE+H GSF+ +H++DA GH FATRL NVF IGKG+K +VSLPKGKG+KLSI EE
Sbjct: 62 VGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGVKLSIAEE 121
Query: 187 ARKRQALATSAAA 199
KR LA AA+
Sbjct: 122 RDKR--LAAKAAS 132
>gi|340058530|emb|CCC52888.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q V VD K R D YPAGFMDVV IP+T + FR+LYD KGRF L I + EA K+ KV
Sbjct: 64 QGFVHVDGKPRKDGKYPAGFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKMLKV 123
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+V G +P T+DG IRYPDP + DT+ D++ K + I+ G VV+VTGG
Sbjct: 124 INVYTGTGRVPVAVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGKGRVVLVTGG 183
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIK 180
NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK K ++LPK +G++
Sbjct: 184 ANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQGLR 243
Query: 181 LSIIEE 186
+++I+E
Sbjct: 244 INVIQE 249
>gi|340058531|emb|CCC52889.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
Length = 273
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q V VD K R D YPAGFMDVV IP+T + FR+LYD KGRF L I + EA K+ KV
Sbjct: 64 QGFVHVDGKPRKDGKYPAGFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKMLKV 123
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+V G +P T+DG IRYPDP + DT+ D++ K + I+ G VV+VTGG
Sbjct: 124 INVYTGTGRVPVAVTHDGHRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGNGRVVLVTGG 183
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIK 180
NRGR+G I + E+H G+F+ ++DA GHEFATR N+F IGK K ++LPK +G++
Sbjct: 184 ANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQGLR 243
Query: 181 LSIIEE 186
+++I+E
Sbjct: 244 INVIQE 249
>gi|413925805|gb|AFW65737.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 167
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/100 (83%), Positives = 88/100 (88%)
Query: 46 LHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 105
+ S E FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI
Sbjct: 60 MDSASVETNMFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIM 119
Query: 106 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+FI FDVGNVVMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 120 DFINFDVGNVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 159
>gi|413933474|gb|AFW68025.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 387
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 91/103 (88%)
Query: 43 RFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN 102
+ + S E FKLCKVRSVQFGQKGIPY+NTYDGRTIRY DPLIKANDTIK++LETN
Sbjct: 277 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYHDPLIKANDTIKINLETN 336
Query: 103 KITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
KI +FIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 337 KIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 379
>gi|293336106|ref|NP_001169793.1| uncharacterized protein LOC100383683 [Zea mays]
gi|223949565|gb|ACN28866.1| unknown [Zea mays]
gi|224031705|gb|ACN34928.1| unknown [Zea mays]
Length = 107
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/92 (89%), Positives = 87/92 (94%)
Query: 54 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 113
A F LCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DLETNKI +FIKFDVG
Sbjct: 8 AFFMLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 67
Query: 114 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
NVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 68 NVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 99
>gi|70909483|emb|CAJ17166.1| ribosomal protein S4e [Curculio glandium]
Length = 188
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 99/123 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD K+RTD YPAGFMDVV+I KT E FRL+YD KG +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKIRTDPNYPAGFMDVVTIEKTGEFFRLIYDDKGTVSIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KG+P++ T+DG+TIRYPDP+IK NDTI+L++ T+KI +FIKF+ GN+ M+TG
Sbjct: 126 VRKVQTGPKGVPFLVTHDGKTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNLCMITG 185
Query: 121 GRN 123
GRN
Sbjct: 186 GRN 188
>gi|413925806|gb|AFW65738.1| putative ribosomal protein S4 (RPS4A) family protein isoform 1 [Zea
mays]
gi|413925807|gb|AFW65739.1| putative ribosomal protein S4 (RPS4A) family protein isoform 2 [Zea
mays]
gi|413925808|gb|AFW65740.1| putative ribosomal protein S4 (RPS4A) family protein isoform 3 [Zea
mays]
Length = 99
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 85/90 (94%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FI FDVGNV
Sbjct: 2 FKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVGNV 61
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 62 VMVTGGRNTGRVGAIKNREKHKGSFETIHV 91
>gi|344246835|gb|EGW02939.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 130
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 97/121 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFM+V+SI KT ENF L+YDTKGRF +H I EEAK+KLCK
Sbjct: 1 MQRFIKIDGKVRTDITYPAGFMNVISIDKTGENFGLIYDTKGRFAVHRITPEEAKYKLCK 60
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGI ++ T+D RTI+YPDPLIK NDTI++DLET KI +FIKFD N+ MVTG
Sbjct: 61 VRKIFVGTKGILHLMTHDARTIQYPDPLIKVNDTIQIDLETGKIIDFIKFDAANLCMVTG 120
Query: 121 G 121
G
Sbjct: 121 G 121
>gi|154333974|ref|XP_001563242.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060254|emb|CAM45663.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 273
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD R D YPAGFMDV+ IPKT + FRLLYD KGRF L S+ + EA+ KL KV ++
Sbjct: 67 VHVDNHPRRDGKYPAGFMDVIEIPKTGDRFRLLYDVKGRFALVSVSEAEAQIKLMKVVNL 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+P T+DG IRYPDP DTI ++ K + IK G V+VTGG NR
Sbjct: 127 YTATGRVPVAVTHDGHRIRYPDPHCSIGDTIVYNVNEKKCVDLIKNRQGKAVIVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I E+H G+F+ H++DA G EFATR N+F IGK V++PK +G+++++
Sbjct: 187 GRIGEIVKVERHPGAFDIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNV 246
Query: 184 IEEARKRQALATS 196
I+E +R A +
Sbjct: 247 IQEREERLIAAEA 259
>gi|414884816|tpg|DAA60830.1| TPA: hypothetical protein ZEAMMB73_165124 [Zea mays]
Length = 877
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 85/94 (90%)
Query: 52 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 111
E FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLET KI FIKFD
Sbjct: 776 ETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETYKIKNFIKFD 835
Query: 112 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
VGN+VMVT RN GRVG+IKNREKHKGSFETIH+
Sbjct: 836 VGNMVMVTSRRNTGRVGVIKNREKHKGSFETIHV 869
>gi|413923241|gb|AFW63173.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 457
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 88/100 (88%)
Query: 46 LHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 105
+ S E FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE NKI
Sbjct: 350 MDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEINKIM 409
Query: 106 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+FIKFDV NVVMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 410 DFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 449
>gi|413923240|gb|AFW63172.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 442
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 88/100 (88%)
Query: 46 LHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 105
+ S E FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE NKI
Sbjct: 335 MDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEINKIM 394
Query: 106 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+FIKFDV NVVMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 395 DFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 434
>gi|146080976|ref|XP_001464142.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|134068232|emb|CAM66518.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
Length = 480
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L S+ + EA+ KL KV ++
Sbjct: 274 VHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMKVVNL 333
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+P T+DG IRYPDP DTI +++ K + IK G V+VTGG NR
Sbjct: 334 YTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANR 393
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I E H G+F H++DA G EFATR N+F IGK V++PK +G+++++
Sbjct: 394 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGLRMNV 453
Query: 184 IEEARKR 190
I+E +R
Sbjct: 454 IQEREER 460
>gi|146080974|ref|XP_001464141.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|398012258|ref|XP_003859323.1| 40S ribosomal protein S4, putative [Leishmania donovani]
gi|134068231|emb|CAM66517.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
gi|322497537|emb|CBZ32611.1| 40S ribosomal protein S4, putative [Leishmania donovani]
Length = 273
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L S+ + EA+ KL KV ++
Sbjct: 67 VHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMKVVNL 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+P T+DG IRYPDP DTI +++ K + IK G V+VTGG NR
Sbjct: 127 YTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I E H G+F H++DA G EFATR N+F IGK V++PK +G+++++
Sbjct: 187 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGLRMNV 246
Query: 184 IEEARKRQALATS 196
I+E +R A +
Sbjct: 247 IQEREERLIAAEA 259
>gi|413936191|gb|AFW70742.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 210
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 82/90 (91%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLETNKI +F KFDV NV
Sbjct: 83 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPFIKANDTIKIDLETNKIMDFFKFDVSNV 142
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
VMVTGGRN GRVG+IKN EKHKGSFE I +
Sbjct: 143 VMVTGGRNTGRVGVIKNWEKHKGSFEVIDV 172
>gi|413935851|gb|AFW70402.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 166
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/92 (85%), Positives = 84/92 (91%)
Query: 54 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 113
A F LCKVRSVQFGQKGIP +NTYD RTIRYPDPLIKANDTIK+DLETNKI +FIKFDVG
Sbjct: 67 AFFMLCKVRSVQFGQKGIPCLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 126
Query: 114 NVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
NVVMV GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 127 NVVMVISGRNTGRVGVIKNREKHKGSFETIHV 158
>gi|401417661|ref|XP_003873323.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489552|emb|CBZ24810.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 430
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L ++ + EA+ KL KV ++
Sbjct: 224 VHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNL 283
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+P T+DG IRYPDP DTI +++ K + IK G V+VTGG NR
Sbjct: 284 YTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANR 343
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I E H G+F H++DA G EFATR N+F IGK V++PK +G+++++
Sbjct: 344 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNV 403
Query: 184 IEEARKR 190
I+E +R
Sbjct: 404 IQEREER 410
>gi|148700270|gb|EDL32217.1| mCG6316 [Mus musculus]
Length = 180
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 93/115 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D K+RT YPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKIRTGIIYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
VR + G KGIP++ T+D TIRYPDPLIK NDTI++DLET KIT+FIKFD GN+
Sbjct: 126 VRKIFVGTKGIPHLVTHDALTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
>gi|401417663|ref|XP_003873324.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489553|emb|CBZ24811.1| putative 40S ribosomal protein S4 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 273
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L ++ + EA+ KL KV ++
Sbjct: 67 VHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNL 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+P T+DG IRYPDP DTI +++ K + IK G V+VTGG NR
Sbjct: 127 YTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I E H G+F H++DA G EFATR N+F IGK V++PK +G+++++
Sbjct: 187 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNV 246
Query: 184 IEEARKRQALATS 196
I+E +R A +
Sbjct: 247 IQEREERLIAAEA 259
>gi|440493255|gb|ELQ75750.1| 40S ribosomal protein S4 [Trachipleistophora hominis]
Length = 267
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 124/199 (62%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R + ++ ++RTDK +P G DV+SIPKT E++RLLY+ GRF LH I +EE+KF+L +
Sbjct: 67 ERMIKINGRIRTDKRFPVGIFDVLSIPKTGEHYRLLYNVAGRFILHQISEEESKFRLSII 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R + +PY+ T DG + Y D I +DT+K+DLET +I++F+ VGN+ + G
Sbjct: 127 RKKLLRKGKVPYLYTNDGASFSYCDQDIVPSDTVKVDLETGRISDFLHISVGNLAFIKKG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN G VG+I N E+ +++ D G FATR NV IG W+SLP+ +G+KL
Sbjct: 187 RNMGCVGVITNIEEKGVEDCKVYLVDKKGRVFATRKVNVCVIGPDGNSWISLPENEGVKL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
S+ +E+ R T AA+
Sbjct: 247 SVFDESNIRYEGETLKAAE 265
>gi|157866320|ref|XP_001681866.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|157866322|ref|XP_001681867.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|11066280|gb|AAG28535.1|AF199018_1 40S ribosomal protein S4 [Leishmania major]
gi|68125165|emb|CAJ03041.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
gi|68125166|emb|CAJ03044.1| putative 40S ribosomal protein S4 [Leishmania major strain
Friedlin]
Length = 273
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD R D YPAGFMDVV IPKT + FRL+YD KGRF L ++ + EA+ KL KV ++
Sbjct: 67 VHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNL 126
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+P T+DG IRYPDP DTI +++ K + IK G V+VTGG NR
Sbjct: 127 YTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANR 186
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIKLSI 183
GR+G I E H G+F H++DA G EFATR N+F IGK V++PK +G+++++
Sbjct: 187 GRIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNV 246
Query: 184 IEEARKRQALATS 196
I+E +R A +
Sbjct: 247 IQEREERLIAAEA 259
>gi|390331682|ref|XP_001192878.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 253
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 111/192 (57%), Gaps = 47/192 (24%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+Y+ KGRF +H I EEAK +
Sbjct: 106 MQRLIKVDGKVRTDITYPAGFMDVISINKTGENFRLIYNVKGRFVVHRIGSEEAKVRFVI 165
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
P +K G++ M+TG
Sbjct: 166 -------------------------HPRLK----------------------GHLCMITG 178
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +REKH GSFE +HI+DA H +ATRLGNVF IGK K +VSLPKGKGI+
Sbjct: 179 GRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKGKGIR 238
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 239 LTIAEEREKRIA 250
>gi|351708512|gb|EHB11431.1| 40S ribosomal protein S4 [Heterocephalus glaber]
Length = 224
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 97/128 (75%)
Query: 39 DTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLD 98
D G F +H I EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++D
Sbjct: 60 DITGHFAIHHITPEEAKYKLCKVRKICVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQID 119
Query: 99 LETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLG 158
L+T KIT+FIKFD GN+ MVTGG N G++G+I NR++H GSF+ H++DA + FAT+L
Sbjct: 120 LDTGKITDFIKFDTGNLCMVTGGANLGKIGVITNRKRHPGSFDVAHVKDANDNRFATQLS 179
Query: 159 NVFTIGKG 166
++ + K
Sbjct: 180 HILLLAKA 187
>gi|414867192|tpg|DAA45749.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 528
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/96 (80%), Positives = 83/96 (86%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
FKLCK+RSVQFGQKGIPY+NTYDG TI YPDPLIKANDTIK+DLETNKI +F KFDV NV
Sbjct: 209 FKLCKMRSVQFGQKGIPYLNTYDGCTILYPDPLIKANDTIKIDLETNKIMDFFKFDVSNV 268
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGH 151
VMVTGGRN GRVG+IKN EKHKGSFE + DA H
Sbjct: 269 VMVTGGRNTGRVGVIKNWEKHKGSFEQLAGPDAAQH 304
>gi|414878754|tpg|DAA55885.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 325
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 86/100 (86%)
Query: 46 LHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 105
+ S E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DL+TNKI
Sbjct: 218 MDSASVETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLQTNKIM 277
Query: 106 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+FIKFDV N+VMVTGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 278 DFIKFDVDNMVMVTGGRNTRRVGVIKNREKHKGSFETIHV 317
>gi|195548072|gb|ACG49261.1| 40S ribosomal protein S4 [Anopheles stephensi]
Length = 187
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 94/122 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV +D KVRTD YPAGFMDV++I KT E FRL+YD KGRF +H I EEAK+KL K
Sbjct: 66 MQRHVKIDGKVRTDPNYPAGFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAKYKLLK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G K +PY+ T+DGRTIRYPDP I +D+I+ D+ T KI + +KF+ GN+ M+TG
Sbjct: 126 VKRVQIGPKRVPYLLTHDGRTIRYPDPAIHQHDSIQYDIATGKILDVLKFEPGNLYMITG 185
Query: 121 GR 122
GR
Sbjct: 186 GR 187
>gi|241710443|ref|XP_002413398.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
gi|215507212|gb|EEC16706.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
Length = 160
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 89/112 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK+KLC+V
Sbjct: 40 QRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRV 99
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 113
+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++IKFD G
Sbjct: 100 KRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSG 151
>gi|429964745|gb|ELA46743.1| hypothetical protein VCUG_01769 [Vavraia culicis 'floridensis']
Length = 267
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 123/199 (61%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
++ + ++ ++RTDK +P G DV+SIPKT E++RL+Y+ GRF LH I +EE+KF+L V
Sbjct: 67 EKMIKINGRIRTDKRFPVGIFDVLSIPKTGEHYRLMYNVAGRFILHQIGEEESKFRLAIV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R + + +PY+ T DG + Y D I DT+K+DLET +I+E + +GN+ + G
Sbjct: 127 RKKRLRKGKVPYLYTNDGGSFSYCDQDIVPGDTVKVDLETGRISEHLHVAIGNLAFIKKG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN G VG++ N E+ +++ D FATR NV+ IG W+SLP+G G+KL
Sbjct: 187 RNMGCVGVVTNIEEKGIGDRKVYLVDKKERVFATRQVNVYVIGPDGSSWISLPEGDGVKL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
S+ +E+ R T AA+
Sbjct: 247 SVFDESNIRYEGETVKAAE 265
>gi|119623175|gb|EAX02770.1| ribosomal protein S4, Y-linked 1, isoform CRA_a [Homo sapiens]
Length = 179
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 90/114 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 114
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGQ 179
>gi|413921922|gb|AFW61854.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 184
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 81/91 (89%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
KLCKVRSVQFGQKGIPY+NTY+GRTIRYPDPLIKANDTIK+DLE NKI +F KFD+GNV
Sbjct: 87 LKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDPLIKANDTIKIDLENNKIMDFFKFDIGNV 146
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 146
VMVTGGRN VG+IKN EKHKGSFE I +Q
Sbjct: 147 VMVTGGRNTRCVGVIKNWEKHKGSFEVIDVQ 177
>gi|414886273|tpg|DAA62287.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 287
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 81/94 (86%)
Query: 52 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 111
E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLETNKI +FIKFD
Sbjct: 178 ETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFD 237
Query: 112 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
V N+VMVTGGRN RVG+IKNREKHKGSF + +
Sbjct: 238 VDNMVMVTGGRNTERVGVIKNREKHKGSFCCLEL 271
>gi|414886272|tpg|DAA62286.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 183
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 81/94 (86%)
Query: 52 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 111
E FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLETNKI +FIKFD
Sbjct: 74 ETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFD 133
Query: 112 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
V N+VMVTGGRN RVG+IKNREKHKGSF + +
Sbjct: 134 VDNMVMVTGGRNTERVGVIKNREKHKGSFCCLEL 167
>gi|194691268|gb|ACF79718.1| unknown [Zea mays]
Length = 102
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/83 (89%), Positives = 80/83 (96%)
Query: 108 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 167
IKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG
Sbjct: 10 IKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGN 69
Query: 168 KPWVSLPKGKGIKLSIIEEARKR 190
KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 70 KPWVSLPKGKGIKLSIIEEQRKR 92
>gi|402468372|gb|EJW03536.1| hypothetical protein EDEG_02120 [Edhazardia aedis USNM 41457]
Length = 274
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
++ + V+ +VR+++ YP G DV++I TN ++RLLY+ RF LH I ++EA +LCKV
Sbjct: 66 KKMIKVNGRVRSERKYPVGLFDVLTIQPTNTSYRLLYNITKRFYLHKIDEKEANVRLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
RS + G+PY+ T DG R+ P I DT+K+D+ +NK+ + IKF G + MVT G
Sbjct: 126 RSKKV-VNGVPYVFTEDGMCYRFLSPNIDKKDTLKIDVNSNKVIDSIKFSSGKLAMVTRG 184
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N G VG+I E H+ + ++++D +G FATR NVF +G W+SLP G G+K
Sbjct: 185 NNMGCVGVIVKIETHEIGTDLVYLKDKVGRNFATRGSNVFVVGTTKDTWISLPHGLGVKT 244
Query: 182 SIIEEA 187
S E++
Sbjct: 245 SEYEKS 250
>gi|413943350|gb|AFW75999.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 336
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/90 (81%), Positives = 78/90 (86%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
FKLCKVRSVQFGQKGI Y+NTYDGRTIRYPD LIKANDTIK+DLETNKI +F KFDV NV
Sbjct: 227 FKLCKVRSVQFGQKGISYLNTYDGRTIRYPDLLIKANDTIKIDLETNKIMDFFKFDVSNV 286
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
MVTGGRN RVG+IKN EKHK SFE I +
Sbjct: 287 FMVTGGRNTRRVGVIKNWEKHKASFEVIDV 316
>gi|27363136|gb|AAO11521.1| 40S ribosomal protein S4 [Azumapecten farreri]
Length = 105
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 85/105 (80%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
VD KVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H I+ EEAK+KLC+V+SV
Sbjct: 1 VDGKVRTAKDYPAGFMDVIAIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCRVKSVTV 60
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFD 111
G KG+P + T+D RTIRYPDPL K NDT+ +D+ T K+ EFIKFD
Sbjct: 61 GAKGVPMLTTHDARTIRYPDPLAKVNDTVMVDIATGKMKEFIKFD 105
>gi|119632118|gb|EAX11713.1| hCG38986, isoform CRA_a [Homo sapiens]
Length = 160
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 89/113 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVR D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H I EEAK+KLCK
Sbjct: 48 MQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 113
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD G
Sbjct: 108 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTG 160
>gi|387594076|gb|EIJ89100.1| ribosomal protein S4 [Nematocida parisii ERTm3]
gi|387595723|gb|EIJ93346.1| ribosomal protein S4 [Nematocida parisii ERTm1]
Length = 277
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 110/185 (59%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R V VD KVR D YPAG MDVVS K +EN+RLLY+ +F L I EEAKFKLCKV
Sbjct: 68 RLVKVDGKVRKDPKYPAGVMDVVSFDKIHENYRLLYNVNKKFCLQPITKEEAKFKLCKVL 127
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
S + + I ++T DGRTI+Y DP IK D+IK DLE+ ++ F +VG G+
Sbjct: 128 SKRLEGRSILTLHTNDGRTIKYADPSIKIGDSIKFDLESGEVQGFYSLEVGKTAYAFRGK 187
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
N G VGII+ + H F ++D G + TR N+ IG + ++LPK +GI+ +
Sbjct: 188 NLGCVGIIREIKVHISGFSISILEDLNGRMYTTRTDNLMVIGNAGESLITLPKERGIRTN 247
Query: 183 IIEEA 187
+ ++
Sbjct: 248 AMMDS 252
>gi|414869427|tpg|DAA47984.1| TPA: hypothetical protein ZEAMMB73_281063 [Zea mays]
Length = 282
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 76/80 (95%)
Query: 107 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG 166
IKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH++D++GH+FAT +GNVFTIGKG
Sbjct: 203 LIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSMGHQFATCMGNVFTIGKG 262
Query: 167 TKPWVSLPKGKGIKLSIIEE 186
KPWVSLPKG+GIKLSIIEE
Sbjct: 263 NKPWVSLPKGRGIKLSIIEE 282
>gi|290561513|gb|ADD38157.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
Length = 266
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI--RDEEAKFKLCKVR 62
V VD K+R + YP G MDV+ +PK +R+ YD KGRF+L + + E +K+C++
Sbjct: 72 VRVDQKIRREPKYPVGLMDVIDLPKCGLAYRVFYDVKGRFKLMPLEKKTNEQNYKICRIV 131
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
I Y+ ++DGRT+RY D + +D++KL+L TN+I + I GN +++ G
Sbjct: 132 KKSVANNKIGYLISHDGRTLRYVDGAVMVHDSVKLNLSTNEIEDHIPLQNGNKALISHGN 191
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
NRGR+GII +K GS++ + ++DA G F TR+ V IG G K ++SLP +G+K +
Sbjct: 192 NRGRIGIIHQIKKFPGSYDLVTLKDARGTTFTTRIDYVMPIGVGNKTFLSLPAEEGVKKT 251
Query: 183 IIE 185
I+E
Sbjct: 252 ILE 254
>gi|378755999|gb|EHY66024.1| ribsomal protein S4 [Nematocida sp. 1 ERTm2]
Length = 278
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 109/185 (58%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R V VD K+R D YPAG MDV+S K +EN+RLLY+ +F L I EEAKFK+CKV
Sbjct: 68 RLVKVDGKIRKDPKYPAGIMDVISFDKIHENYRLLYNVNQKFCLQPITKEEAKFKICKVL 127
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
+ + + I ++T DGRTI+Y DP I D++K +LET ++ E VGN G+
Sbjct: 128 AKRLEGRSILTLHTNDGRTIKYADPSINIGDSVKFNLETGEVMESFPLKVGNTAYAFRGK 187
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLS 182
N G VGII+ + H F ++D G + TR N+ IG + ++LPK +GI+ +
Sbjct: 188 NLGCVGIIREVKVHISGFTISILEDLNGRMYTTRTDNLMAIGTAGESLITLPKERGIRTN 247
Query: 183 IIEEA 187
+ E+
Sbjct: 248 ALMES 252
>gi|413942294|gb|AFW74943.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 307
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 73/77 (94%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+TNKI +F KFDVGNV
Sbjct: 231 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 290
Query: 116 VMVTGGRNRGRVGIIKN 132
VMVTGGRN GRVG+IKN
Sbjct: 291 VMVTGGRNTGRVGVIKN 307
>gi|413942295|gb|AFW74944.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 152
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 73/77 (94%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+TNKI +F KFDVGNV
Sbjct: 76 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 135
Query: 116 VMVTGGRNRGRVGIIKN 132
VMVTGGRN GRVG+IKN
Sbjct: 136 VMVTGGRNTGRVGVIKN 152
>gi|457682|dbj|BAA04961.1| SS620 [Oryza sativa]
Length = 90
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 71/75 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCK
Sbjct: 14 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 73
Query: 61 VRSVQFGQKGIPYIN 75
VRSVQFGQKGI Y+N
Sbjct: 74 VRSVQFGQKGIRYLN 88
>gi|414868312|tpg|DAA46869.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 161
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 75/83 (90%), Gaps = 2/83 (2%)
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
S++ KGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGN MVTGGR
Sbjct: 73 SIETNMKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGN--MVTGGR 130
Query: 123 NRGRVGIIKNREKHKGSFETIHI 145
N RVG+IK+REKHKGSFETIH+
Sbjct: 131 NTRRVGVIKHREKHKGSFETIHV 153
>gi|302420133|ref|XP_003007897.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
gi|261353548|gb|EEY15976.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
Length = 187
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 81/98 (82%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAGFMDV++I KT ENFRL+YD KGRF +H I+ EEA++KL K
Sbjct: 66 MQRLVKVDGKVRTDITYPAGFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAEYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLD 98
V+ VQ G+ G+P++ T+D RTIRYPDPLIK NDT+K+D
Sbjct: 126 VKRVQLGRGGVPFLVTHDARTIRYPDPLIKVNDTVKID 163
>gi|189484003|gb|ACE00295.1| ribosomal protein S4 [Caenorhabditis brenneri]
Length = 177
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 85/112 (75%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV
Sbjct: 66 QRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVG 113
+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+F+KF+ G
Sbjct: 126 KSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPG 177
>gi|432114688|gb|ELK36527.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 269
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 81/103 (78%)
Query: 90 KANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 149
+ NDTI++DLET++IT+ IKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 165 RVNDTIQIDLETDRITDCIKFDAGNLCMVTGGANLGRIGMITNRERHPGSFDGVHVKDAN 224
Query: 150 GHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
G+ FA +L N F GKG KPW+SLP+GKGI L+I EE KR A
Sbjct: 225 GNSFAAQLSNSFVTGKGNKPWISLPRGKGICLTIAEERDKRLA 267
>gi|158187822|gb|ABW23200.1| ribosomal protein rps4 [Eurythoe complanata]
Length = 113
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 84/104 (80%)
Query: 33 NFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 92
NFR +YD KGRF +H I+ EEAK+KLC+V + + G KG+P++ T+D RTIRYPDPLI+ N
Sbjct: 1 NFRPIYDVKGRFTVHRIQPEEAKYKLCRVGAWETGPKGVPFLVTHDARTIRYPDPLIRVN 60
Query: 93 DTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKH 136
D++++D+ KI +FIKFD GN+ M+TGGRN GRVG++ +RE+H
Sbjct: 61 DSVQVDIAAGKIKDFIKFDSGNLCMITGGRNLGRVGLVTHRERH 104
>gi|344257870|gb|EGW13974.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 137
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 80/107 (74%)
Query: 86 DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
D LIK NDTI++DLET KI FIKFD GN+ MVTGG N GR G+I NRE+H GSF+ +H+
Sbjct: 6 DTLIKVNDTIQIDLETGKIAYFIKFDTGNLCMVTGGANLGRTGVITNRERHPGSFDVVHV 65
Query: 146 QDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
+DA G+ FATR N+ IGK KPW+SLP+GKG L+I EE ++ +
Sbjct: 66 KDANGNSFATRPSNILVIGKSNKPWISLPQGKGTCLTIAEERQEASS 112
>gi|388506280|gb|AFK41206.1| unknown [Lotus japonicus]
Length = 141
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/69 (89%), Positives = 67/69 (97%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+LVD KVRTDKTYP+GFMDVVSIPKTNENFRLLYD KGRFRLHS+RD+EAKFKLCK
Sbjct: 66 MQRHILVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDIKGRFRLHSVRDDEAKFKLCK 125
Query: 61 VRSVQFGQK 69
VRSVQFGQ+
Sbjct: 126 VRSVQFGQR 134
>gi|60418888|gb|AAX19871.1| putative ribosomal protein S4, partial [Doryanthes excelsa]
Length = 131
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/66 (95%), Positives = 66/66 (100%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHVMVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQF 66
VR+VQF
Sbjct: 126 VRNVQF 131
>gi|166952347|gb|ABZ04256.1| ribosomal protein rps4 [Lineus viridis]
Length = 153
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 72/88 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTDK YPAGFMDVVSI KTNENFRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDKNYPAGFMDVVSIEKTNENFRLIYDVKGRFAIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPL 88
V+ + KG+PY+ T+DGRTIRYPDPL
Sbjct: 126 VKKLGVAAKGVPYVVTHDGRTIRYPDPL 153
>gi|407081049|gb|AFS89697.1| ribosomal protein S4, partial [Plutella xylostella]
Length = 92
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 74/92 (80%)
Query: 84 YPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI 143
YPDPLIK ND+I+LD+ T +I + IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +
Sbjct: 1 YPDPLIKVNDSIQLDIATCRIMDIIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIV 60
Query: 144 HIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
HI+D GH FATRL NVF IGKGTK ++SLP+
Sbjct: 61 HIKDTTGHTFATRLNNVFIIGKGTKAYISLPR 92
>gi|414868034|tpg|DAA46591.1| TPA: hypothetical protein ZEAMMB73_160801 [Zea mays]
Length = 956
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 64/70 (91%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +F KFDVGN+
Sbjct: 886 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFFKFDVGNM 945
Query: 116 VMVTGGRNRG 125
VMVT G G
Sbjct: 946 VMVTAGGTPG 955
>gi|396081888|gb|AFN83502.1| 40S ribosomal protein S4 [Encephalitozoon romaleae SJ-2008]
Length = 268
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 119/186 (63%), Gaps = 5/186 (2%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
+++ V+ KVRT+ +P G DV+SI KT E+FR+LY+T +F LH I +EA ++L KV
Sbjct: 68 KNIKVNGKVRTNSHFPVGLFDVISIEKTGEHFRVLYNTHKKFHLHKISSQEAGYRLAKV- 126
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
+ ++ +GIPY+ + G +IR+ DP I+ TIK+ ET+K+ E I V VV V+ G+
Sbjct: 127 TKKYTSRGIPYVVSSCGLSIRFCDPAIEQEYTIKISNETSKVVEHIAPGVDKVVFVSRGK 186
Query: 123 NRGRVGIIKNREKHKGSFETIHIQ-DALGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIK 180
RGR+G+I N +G ET+++ D G+ F+ + IG+ ++ W++LPK GI+
Sbjct: 187 ARGRIGVI-NTIDVQGK-ETVYVMTDFAGNTFSCTSKSCIIIGESSENIWITLPKENGIR 244
Query: 181 LSIIEE 186
LS +E+
Sbjct: 245 LSELEK 250
>gi|388281854|dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyrus pyrifolia var.
culta]
Length = 90
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 66/70 (94%)
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
M GG NRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPW+SLPKG
Sbjct: 8 MGAGGWNRGRVGVIKNREKHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWISLPKG 67
Query: 177 KGIKLSIIEE 186
KGIKL+IIEE
Sbjct: 68 KGIKLTIIEE 77
>gi|110456358|gb|ABG74702.1| ribosomal protein S4-like protein [Diaphorina citri]
Length = 104
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 154
I+ ++ T+KI + I+FD GN+ M+TGGRN GRVG + NRE+H GSF+ +H++D GH FA
Sbjct: 1 IQYEIATSKIIDHIRFDTGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHVKDGNGHVFA 60
Query: 155 TRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSAAAQ 200
TRL NVF IGKGTK ++SLPKGKGIKL+I EE KR LA AA+
Sbjct: 61 TRLNNVFIIGKGTKAYISLPKGKGIKLTISEERDKR--LAAKAASS 104
>gi|401827348|ref|XP_003887766.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
gi|392998773|gb|AFM98785.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
Length = 268
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
+++ V+ K RT+ +P G DV+SI KT E+FR+LY+ + +F LH I EEAK++L KV
Sbjct: 68 KNIKVNGKARTNSHFPVGLFDVISIEKTGEHFRVLYNVQKKFHLHRINSEEAKYRLAKV- 126
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
+ ++ +GIPY+ + G +IR+ DP I+ TIK+ ET+K+ E+I V +V V+ G+
Sbjct: 127 TKKYKYQGIPYVVSSCGLSIRFCDPAIEQEYTIKISNETSKVIEYIAPGVDKIVFVSRGK 186
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIKL 181
RGR+GII E +G + D G+ F+ + IG+ ++ ++LP KGI+L
Sbjct: 187 ARGRIGIINTIEV-QGKDTVYVMTDFAGNTFSCTSKSCIIIGESSENILITLPSEKGIRL 245
Query: 182 SIIEE--ARKRQALATSA 197
S +E+ A+ + + TSA
Sbjct: 246 SELEKINAQLGEMIDTSA 263
>gi|225714340|gb|ACO13016.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
gi|290462551|gb|ADD24323.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
Length = 265
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 1/185 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R + V+ VRTDK +P G D +++ + RLLY+T G+F L I E++ K+ KV
Sbjct: 67 NRMIKVNNNVRTDKDFPVGIFDTLTVGDNKDFLRLLYNTDGKFVLKRISKEDSMTKIVKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R + +PY+ T DG R+ D IK N T+K+D ETNKI +F+K VG++V G
Sbjct: 127 RETAIRKGNVPYVYTMDGCCYRFCDQNIKKNFTVKIDFETNKIVKFLKLVVGSIVFTING 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPW-VSLPKGKGIK 180
+NRG VG + E+++ S I IQD G EF+T + IG + + L KGIK
Sbjct: 187 KNRGSVGKVIGIEENEYSENIIKIQDFNGREFSTIESSTICIGNKVDNYEIQLLDTKGIK 246
Query: 181 LSIIE 185
SI+E
Sbjct: 247 KSILE 251
>gi|62002191|gb|AAX58703.1| 40S ribosomal protein S4 [Hydractinia echinata]
Length = 91
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 74/90 (82%)
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 126
G+K +PYI T+D RTIRYPDP IK NDT+ +D++T K+T+FIKFD GN VMV GGRN GR
Sbjct: 2 GKKSVPYIVTHDARTIRYPDPSIKINDTVVIDVKTGKVTDFIKFDTGNTVMVIGGRNTGR 61
Query: 127 VGIIKNREKHKGSFETIHIQDALGHEFATR 156
VGII +RE+H S++ +HI+DA G++FATR
Sbjct: 62 VGIITHRERHASSYDIVHIKDAAGNQFATR 91
>gi|449328827|gb|AGE95103.1| 40S ribosomal protein S4 [Encephalitozoon cuniculi]
Length = 268
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
++++ V+ +VRT+ +P G DVVSI KT E+FR+LY+ +F LH I EEA ++L KV
Sbjct: 67 EKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ ++ +GIPYI + G +IR+ DP I TIK+ ET+K+ E+I V+ V+ G
Sbjct: 127 -TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSKG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIK 180
+ RGRVG+I N +G + D G+ F+ + IG+ ++ W++LPK +GI+
Sbjct: 186 KARGRVGVI-NTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIR 244
Query: 181 LSIIEE 186
S +E+
Sbjct: 245 QSELEK 250
>gi|19173414|ref|NP_597217.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
gi|74621136|sp|Q8SRB9.1|RS4_ENCCU RecName: Full=40S ribosomal protein S4
gi|19171003|emb|CAD26393.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
Length = 268
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
++++ V+ +VRT+ +P G DVVSI KT E+FR+LY+ +F LH I EEA ++L KV
Sbjct: 67 EKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ ++ +GIPYI + G +IR+ DP I TIK+ ET+K+ E+I V+ V+ G
Sbjct: 127 -TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIK 180
+ RGRVG+I N +G + D G+ F+ + IG+ ++ W++LPK +GI+
Sbjct: 186 KARGRVGVI-NTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIR 244
Query: 181 LSIIEE 186
S +E+
Sbjct: 245 QSELEK 250
>gi|303390290|ref|XP_003073376.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
gi|303302522|gb|ADM12016.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
Length = 268
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 111/184 (60%), Gaps = 3/184 (1%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
++V V+ KVRT+ +P G DVVSI KT E+FR+LY+ +F LH I EA ++L KV
Sbjct: 68 KNVKVNGKVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRINSSEASYRLAKV- 126
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
+ ++ + +PY+ + G +IR+ DP I TIK+ ET+K+ E+I+ V VV V+ G+
Sbjct: 127 TKKYESQNVPYVVSSCGLSIRFCDPAIDVGYTIKISNETSKVIEYIEPGVDKVVFVSSGK 186
Query: 123 NRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIKL 181
RGR+G+I N +G + D GH F+ + IG+ + ++LPK +GI+L
Sbjct: 187 ARGRIGVI-NTISIQGKEVVYGMTDFAGHTFSCTSKSCILIGESEENILITLPKERGIRL 245
Query: 182 SIIE 185
S +E
Sbjct: 246 SSLE 249
>gi|219880767|gb|ACL51658.1| ribosomal protein S4 Y-linked 1 [Callithrix jacchus]
Length = 153
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 70/88 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYP G MDV+SI KT E+FRL+YDTKGRF +H IR EEA++KLCK
Sbjct: 66 MQRFIRIDGKVRVDITYPVGLMDVISIEKTGEHFRLVYDTKGRFAVHRIRVEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPL 88
VR + G KGIP++ T+D RTIRYPDP+
Sbjct: 126 VRKITMGTKGIPHLVTHDARTIRYPDPV 153
>gi|429963313|gb|ELA42857.1| hypothetical protein VICG_00172 [Vittaforma corneae ATCC 50505]
Length = 255
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 1/191 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R + V+ K T +P G DVV+I KTN++FRL ++ +F+LH I +EAK ++ KV
Sbjct: 56 SRMIAVNGKEITSIKFPVGLFDVVTILKTNQHFRLYFNANRKFKLHKISSDEAKVRISKV 115
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
S ++ IP +T DG ++ DP IK NDT+K+D+ TN+I + F+ G + V G
Sbjct: 116 VS-KYTNDSIPMTHTKDGYNFKFADPSIKINDTVKIDIATNRIVGHLPFEAGKIGYVFSG 174
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GR+G IK ++ E +QD F+ + V IG+ +S+ + GI+L
Sbjct: 175 PNAGRIGTIKYIDRSPDGKEIAFLQDPREKPFSVSMDKVMVIGESNSLLISMDENDGIRL 234
Query: 182 SIIEEARKRQA 192
+ E + + A
Sbjct: 235 NAFEISNNKYA 245
>gi|38047855|gb|AAR09830.1| similar to Drosophila melanogaster RpS4, partial [Drosophila
yakuba]
Length = 150
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 68/85 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MD++++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYP 85
V+ Q G KG+P++ T+DGRTIRYP
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYP 150
>gi|262401341|gb|ACY66573.1| ribosomal protein S4 [Scylla paramamosain]
Length = 93
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 104 ITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 163
+ + IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +H++DA+GH FATRL NVF I
Sbjct: 1 MKDIIKFDSGNLCMITGGRNLGRVGTIVSRERHAGSFDIVHVKDAVGHTFATRLNNVFVI 60
Query: 164 GKGTKPWVSLPKGKGIKLSIIEEARKRQA 192
GKG K +VSLP+GKGIKLSI EE +R A
Sbjct: 61 GKGNKAYVSLPRGKGIKLSIAEERDRRLA 89
>gi|444724744|gb|ELW65342.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 145
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 69/96 (71%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + V KVRTD TYP GFM V SI KT ENFRL+YDTKG F +H + EEAK+KLCKV
Sbjct: 49 QRFIKVAGKVRTDITYPVGFMGVTSIDKTRENFRLIYDTKGHFTVHRVTPEEAKYKLCKV 108
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKL 97
R + G KG P++ T+ T RYPDPLIK NDT +L
Sbjct: 109 RKIFEGTKGTPHLVTHVAHTTRYPDPLIKVNDTFRL 144
>gi|347524208|ref|YP_004781778.1| 30S ribosomal protein S4E, central domain containing protein
[Pyrolobus fumarii 1A]
gi|343461090|gb|AEM39526.1| Ribosomal protein S4E, central domain protein [Pyrolobus fumarii
1A]
Length = 255
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 12/184 (6%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
H VD +VR D +P GFMDVV + T E +R+L F LH I DEEAK KLC++
Sbjct: 70 HFKVDGRVRRDYKFPVGFMDVVEVVDTGEKYRILPYPTRFFILHPISDEEAKVKLCRIED 129
Query: 64 VQFGQKGIPYINTYDGRT--IRYPDPLIKAND--------TIKLDLETNKITEFIKFDVG 113
+ G ++ +DGR IR DP +A++ T+K+ + +I +++ +VG
Sbjct: 130 KSTVKGGHVQLHCHDGRNVLIRVSDP-TRADEAKPYRTLGTLKITIPGQEILDYVPLEVG 188
Query: 114 NVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGTKPWVS 172
N+ +V GGRN GRVG I ++ G +I ++DA G +F T L VF IGKG +P +S
Sbjct: 189 NLAIVFGGRNVGRVGKIVEIQRGMGRKRSIVTLEDARGEKFQTSLDYVFVIGKGDEPLIS 248
Query: 173 LPKG 176
LP+G
Sbjct: 249 LPEG 252
>gi|67621222|ref|XP_667747.1| 40S ribosomal protein S4 [Cryptosporidium hominis TU502]
gi|54658904|gb|EAL37512.1| 40S ribosomal protein S4 [Cryptosporidium hominis]
Length = 152
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 72/105 (68%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD +P G MDVVSI + +N R++YDTKGRF I +EA FKLCK
Sbjct: 48 MQRLIKVDGKVRTDICFPLGLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCK 107
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 105
V V G KGIP T D RT+RY P +KANDT+K+DL T K++
Sbjct: 108 VTKVALGAKGIPTATTNDARTLRYIHPDVKANDTVKVDLATGKVS 152
>gi|444721894|gb|ELW62603.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 188
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 60 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
KVR + G KGI ++ T+D TI PDPLIK N TI+ D++T K+T+ I FD G++ MVT
Sbjct: 39 KVRQIFVGTKGILHLVTHDAPTICSPDPLIKVNTTIQTDVQTGKVTDCIVFDTGSLCMVT 98
Query: 120 GGRNRGRVGIIKNREKH-KGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKG 178
GG + GR+G++ +RE+ F+ +H++DA + FATRL ++F IGK KPW+S P
Sbjct: 99 GGADLGRIGVLTSRERDILAFFDVVHVKDANDNSFATRLLSIFVIGKDNKPWISPPTSPW 158
Query: 179 IK 180
+K
Sbjct: 159 LK 160
>gi|300707086|ref|XP_002995766.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
gi|239604977|gb|EEQ82095.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
Length = 263
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 109/187 (58%), Gaps = 6/187 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
++++++ KV + +P G DV+S+ KTN ++R+L+ F LH I +EE+K+KL KV
Sbjct: 67 SKNIMINGKVIEKRKFPVGVGDVISVVKTNLHYRVLFGVDKSFILHQIDEEESKYKLAKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ + +PYI T DG +Y +P I N+T+K+ L+T + +++ F G +V V G
Sbjct: 127 LNKKTMYNNVPYIFTNDGACFKYCNPAIDINNTVKICLKTRTVVDYVSFREGGIVYVYTG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIK 180
N GR+GIIK + +++ +D +F + ++ IG +SLP+ KG++
Sbjct: 187 ENTGRIGIIKTIKD-----KSLICEDFGSKQFEASISSLIAIGDSEDSLLISLPEEKGVR 241
Query: 181 LSIIEEA 187
L+ +EE+
Sbjct: 242 LTALEES 248
>gi|83773390|dbj|BAE63517.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 146
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 66/81 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+PAGFMDV+ I KT ENFRL+YDTKGRF +H I+ EEA++KLCK
Sbjct: 66 MQRLIQVDGKVRTDPTFPAGFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRT 81
V+ VQ G+ GIP++ T+D RT
Sbjct: 126 VKRVQLGKGGIPFLVTHDART 146
>gi|219881173|gb|ACL51789.1| putative ribosomal protein S4 [Picea abies]
gi|219881175|gb|ACL51790.1| putative ribosomal protein S4 [Picea glauca]
Length = 71
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 128 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA 187
G+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTKPWVSLPKGKG+KLSIIEEA
Sbjct: 1 GVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEA 60
Query: 188 RKRQ 191
RKR
Sbjct: 61 RKRH 64
>gi|269861121|ref|XP_002650275.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
gi|220066289|gb|EED43777.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
Length = 270
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS- 63
VLV+ + + G DV+SI KTNE++RL+ +F+L I +EA+F+L KV S
Sbjct: 70 VLVNNRKLLNHKSVVGLFDVISIKKTNEHYRLILGINRKFKLQKISSDEARFRLTKVTSK 129
Query: 64 ------VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 117
+ + +P T G RY +P I+ NDT+K+D+ NKI E KF+ G +V
Sbjct: 130 STDKLIIDGVETNVPMTRTLCGYNFRYANPEIEVNDTVKIDIVENKILEHYKFETGAIVF 189
Query: 118 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
+ G N GRVG IK+ E I + D + F T L + IGK ++L + K
Sbjct: 190 IYSGSNIGRVGTIKSIESQTNKKILIELVDGNMNHFTTLLSSAMVIGKDDSTLITLDESK 249
Query: 178 GIKLSIIEEA 187
GIKL+ E++
Sbjct: 250 GIKLTEYEKS 259
>gi|396468642|ref|XP_003838223.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214790|emb|CBX94744.1| predicted protein [Leptosphaeria maculans JN3]
Length = 81
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 65/81 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H I DEEA++KL K
Sbjct: 1 MQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 60
Query: 61 VRSVQFGQKGIPYINTYDGRT 81
V+ VQ G+ GIPY+ T+D RT
Sbjct: 61 VKRVQLGKGGIPYLVTHDART 81
>gi|413936106|gb|AFW70657.1| putative protein disulfide isomerase family protein isoform 1 [Zea
mays]
gi|413936107|gb|AFW70658.1| putative protein disulfide isomerase family protein isoform 2 [Zea
mays]
Length = 84
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 83 RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFET 142
RYPDPLIKA DTIK+DLETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKG FET
Sbjct: 14 RYPDPLIKAIDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGIFET 73
Query: 143 IHI 145
IH+
Sbjct: 74 IHM 76
>gi|218117277|emb|CAQ37766.1| 40S ribosomal protein S4 [Echinorhynchus truttae]
Length = 83
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V VQ G KG+P+++T+DGRTIRYPDP IK +DTIK+++ET KI +FIKF+VGN+ M+TG
Sbjct: 1 VNHVQTGPKGVPFLSTHDGRTIRYPDPHIKVHDTIKINVETGKIEDFIKFEVGNICMITG 60
Query: 121 GRNRGRVGIIKNREKHKGSFETI 143
G N GR+G + +REKH GSFE I
Sbjct: 61 GNNLGRIGALISREKHPGSFEII 83
>gi|444732233|gb|ELW72539.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 512
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KV TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +EAK+KLCK
Sbjct: 65 MQRFIKIDGKVCTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRNTPQEAKYKLCK 124
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPD 86
VR + G +GIP + T+D TI YPD
Sbjct: 125 VRKIFVGTEGIPRLVTHDAHTICYPD 150
>gi|215809334|gb|ACJ70374.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809336|gb|ACJ70375.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809338|gb|ACJ70376.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809340|gb|ACJ70377.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809342|gb|ACJ70378.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809344|gb|ACJ70379.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809346|gb|ACJ70380.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809348|gb|ACJ70381.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809350|gb|ACJ70382.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809352|gb|ACJ70383.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809354|gb|ACJ70384.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809356|gb|ACJ70385.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809358|gb|ACJ70386.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809360|gb|ACJ70387.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809362|gb|ACJ70388.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809364|gb|ACJ70389.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809366|gb|ACJ70390.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809368|gb|ACJ70391.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809370|gb|ACJ70392.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809372|gb|ACJ70393.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809374|gb|ACJ70394.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809376|gb|ACJ70395.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809378|gb|ACJ70396.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809380|gb|ACJ70397.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809382|gb|ACJ70398.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809384|gb|ACJ70399.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809386|gb|ACJ70400.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809388|gb|ACJ70401.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809390|gb|ACJ70402.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809392|gb|ACJ70403.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809394|gb|ACJ70404.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809396|gb|ACJ70405.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809398|gb|ACJ70406.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809400|gb|ACJ70407.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809402|gb|ACJ70408.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809404|gb|ACJ70409.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809406|gb|ACJ70410.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809408|gb|ACJ70411.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809410|gb|ACJ70412.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|215809412|gb|ACJ70413.1| putative ribosomal protein S4 [Pinus sylvestris]
gi|219881163|gb|ACL51784.1| putative ribosomal protein S4 [Pinus contorta]
gi|219881165|gb|ACL51785.1| putative ribosomal protein S4 [Pinus nigra]
gi|219881167|gb|ACL51786.1| putative ribosomal protein S4 [Pinus pinaster]
gi|219881169|gb|ACL51787.1| putative ribosomal protein S4 [Pinus ponderosa]
gi|219881171|gb|ACL51788.1| putative ribosomal protein S4 [Pinus resinosa]
Length = 71
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 128 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEA 187
G IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKGTKPWVSLPKGKG+KLSII+EA
Sbjct: 1 GTIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIDEA 60
Query: 188 RKR 190
RKR
Sbjct: 61 RKR 63
>gi|300174368|gb|ADJ68152.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 122
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H I EAK+KLCK
Sbjct: 44 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCK 103
Query: 61 VRSVQFGQKGIPYINTYDG 79
VR VQ G KGIP++ T+DG
Sbjct: 104 VRRVQTGPKGIPFLVTHDG 122
>gi|300174358|gb|ADJ68147.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174362|gb|ADJ68149.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174366|gb|ADJ68151.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174374|gb|ADJ68155.1| putative RpS4 protein [Caenacis lauta]
Length = 122
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H I EAK+KLCK
Sbjct: 44 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCK 103
Query: 61 VRSVQFGQKGIPYINTYDG 79
VR VQ G KGIP++ T+DG
Sbjct: 104 VRRVQTGPKGIPFLVTHDG 122
>gi|300174364|gb|ADJ68150.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174370|gb|ADJ68153.1| putative RpS4 protein [Cecidostiba fungosa]
gi|300174372|gb|ADJ68154.1| putative RpS4 protein [Cecidostiba fungosa]
gi|401878838|gb|AFQ30711.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878840|gb|AFQ30712.1| putative RpS4, partial [Cecidostiba semifascia]
gi|401878842|gb|AFQ30713.1| putative RpS4, partial [Cecidostiba semifascia]
Length = 121
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 62/79 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H I EAK+KLCK
Sbjct: 43 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCK 102
Query: 61 VRSVQFGQKGIPYINTYDG 79
VR VQ G KGIP++ T+DG
Sbjct: 103 VRRVQTGPKGIPFLVTHDG 121
>gi|414872252|tpg|DAA50809.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 255
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 79/145 (54%), Gaps = 49/145 (33%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+QRHVLVD K M S+ +T TK RLH IRDE+AKFKLCK
Sbjct: 152 LQRHVLVDGK-----------MPFPSLRQTG--------TKRCLRLHPIRDEDAKFKLCK 192
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
ANDTIK+DLETNKI +F KFDVGNVVMVTG
Sbjct: 193 ------------------------------ANDTIKIDLETNKIMDFFKFDVGNVVMVTG 222
Query: 121 GRNRGRVGIIKNREKHKGSFETIHI 145
GRN GRVG IKN EKHKGSFE I +
Sbjct: 223 GRNIGRVGEIKNWEKHKGSFEVIDV 247
>gi|329009625|gb|AEB71432.1| Y-linked ribosomal protein S4 [Bubalus bubalis]
Length = 77
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 61/75 (81%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
+D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCKVR +
Sbjct: 3 IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFV 62
Query: 67 GQKGIPYINTYDGRT 81
G KGIP++ T+D RT
Sbjct: 63 GTKGIPHLVTHDART 77
>gi|414868249|tpg|DAA46806.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 194
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 79/145 (54%), Gaps = 54/145 (37%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD K+ S P + R++ G FRLH IRDE+AK
Sbjct: 96 MQRHVLVDGKM--------------SFPSLRQT-RII----GCFRLHPIRDEDAK----- 131
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
ANDTIK+DLETNKI +FIKFD+GNVVMVTG
Sbjct: 132 ------------------------------ANDTIKIDLETNKIMDFIKFDIGNVVMVTG 161
Query: 121 GRNRGRVGIIKNREKHKGSFETIHI 145
GRN VG+IKNREKHKGSFETIH+
Sbjct: 162 GRNTRHVGVIKNREKHKGSFETIHV 186
>gi|304314266|ref|YP_003849413.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
gi|302587725|gb|ADL58100.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
Marburg]
Length = 242
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 3/174 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD + R + +P GFMDVVSIP+T E +R+L D +GR LH I +E A FKLCK+ +
Sbjct: 71 VLVDGRPRKNYKFPVGFMDVVSIPRTGEVYRVLPDERGRLVLHPIGEENAGFKLCKIVNK 130
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DGR D + D +KL + +I E I F+ G++ +VTGGR+
Sbjct: 131 TTIRGGKTQLNLHDGRNYLSEDEF-RVGDVVKLAVPEQEILERIPFEKGSLGLVTGGRHT 189
Query: 125 GRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
G +G IK + S T I+ G F T VF IGK + +SLP GK
Sbjct: 190 GEIGRIKKINITRSSMPNTAVIETEAGKTFLTLKDYVFVIGK-DESVISLPGGK 242
>gi|396468646|ref|XP_003838224.1| predicted protein [Leptosphaeria maculans JN3]
gi|312214791|emb|CBX94745.1| predicted protein [Leptosphaeria maculans JN3]
Length = 83
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 64/81 (79%)
Query: 81 TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSF 140
+IRYPDP IK NDT+K+DL T KI++FIKFD G +VMVTGGRN GRVG+I +RE+H G F
Sbjct: 3 SIRYPDPAIKVNDTVKIDLSTGKISDFIKFDTGVLVMVTGGRNMGRVGVITHRERHDGGF 62
Query: 141 ETIHIQDALGHEFATRLGNVF 161
+H++DA+ +EF TR NV
Sbjct: 63 NIVHLKDAVDNEFTTRETNVM 83
>gi|413932716|gb|AFW67267.1| putative threonine aldolase family protein [Zea mays]
Length = 467
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 54 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
+FKLCKVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 389 CEFKLCKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 445
>gi|414875901|tpg|DAA53032.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 215
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 52/55 (94%)
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
FKLCKVRSVQFGQKGIPY+NTYDGRTI YPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 139 FKLCKVRSVQFGQKGIPYLNTYDGRTIHYPDPLIKANDTIKIDLETNKIMDFIKL 193
>gi|413936658|gb|AFW71209.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 150
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 55 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
+FKLCKVR VQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 73 QFKLCKVRFVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKL 128
>gi|15678046|ref|NP_275160.1| 30S ribosomal protein S4 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3914912|sp|O26123.1|RS4E_METTH RecName: Full=30S ribosomal protein S4e
gi|2621043|gb|AAB84516.1| ribosomal protein S4 [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 242
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD + R + +P GFMDVVSIP+T + +R+L D +GR LH I +E A FKLCK+ +
Sbjct: 71 VLVDGRPRKNYKFPVGFMDVVSIPRTGDVYRVLPDERGRLVLHPIDEENAGFKLCKIVNK 130
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DGR D + D +KL + +I E I F+ ++ +VTGGR+
Sbjct: 131 TTIKGGRTQLNLHDGRNYLSDDEF-RVGDVVKLSIPEQEILERIPFEKDSLGLVTGGRHT 189
Query: 125 GRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
G +G IK + S T I+ G F T VF IGK + +SLP GK
Sbjct: 190 GEIGKIKKINITRSSMPNTAVIETGAGKTFLTLKDYVFVIGK-DESVISLPGGK 242
>gi|119621546|gb|EAX01141.1| hCG1643126, isoform CRA_b [Homo sapiens]
Length = 128
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 37/160 (23%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR-----FRLHSIRDEEAK 55
MQ+ + +D KV TD TY G +DV SI KT ENF L+ DT+ + ++L + A
Sbjct: 1 MQQFIKIDDKVLTDITYATGSLDV-SINKTRENFHLICDTRAQKKSLIWQLMMLAPSAAL 59
Query: 56 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
LIK ND ++ DLET KIT+FI+F+ GN+
Sbjct: 60 -------------------------------ALIKVNDIVQTDLETGKITDFIRFNTGNL 88
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 155
MVTGG N GR+G I NREKH G F+ +H++DA + FAT
Sbjct: 89 CMVTGGANLGRIGAITNREKHPGFFDVVHVKDANSNSFAT 128
>gi|444706232|gb|ELW47581.1| EF-hand domain-containing family member A1 [Tupaia chinensis]
Length = 426
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 62/79 (78%)
Query: 55 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 114
++KLCKVR + G KGIP++ T+D RTI Y DPLIK NDTI++D+E K ++FIKFD GN
Sbjct: 348 QYKLCKVRKIFVGIKGIPHLVTHDARTISYLDPLIKVNDTIQIDMEIGKSSDFIKFDTGN 407
Query: 115 VVMVTGGRNRGRVGIIKNR 133
+ MVTGG N GR+G+I NR
Sbjct: 408 LCMVTGGANLGRIGVITNR 426
>gi|388516491|gb|AFK46307.1| unknown [Lotus japonicus]
Length = 98
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 66 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRG 125
G K +PYI T+D RTIRYPDP IKANDTI+LD+ T KI E IKFD GN+VM+TGG N G
Sbjct: 1 MGPKKVPYIITHDARTIRYPDPHIKANDTIQLDIATGKIQEHIKFDTGNIVMITGGHNLG 60
Query: 126 RVGIIKNREKHKGSF 140
RVG+I++RE+H G
Sbjct: 61 RVGVIQSRERHPGHL 75
>gi|379994273|gb|AFD22763.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 74
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 56/71 (78%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD K RTD TYPAGFMDV+SI KTNENFRLLYDTK RF L I EEAKFKLC+V
Sbjct: 4 QRLLKVDGKARTDATYPAGFMDVISIEKTNENFRLLYDTKARFALKKITAEEAKFKLCRV 63
Query: 62 RSVQFGQKGIP 72
+ + GQKGIP
Sbjct: 64 KKLLVGQKGIP 74
>gi|413941845|gb|AFW74494.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 173
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 71 IPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGII 130
IPY+NTYDGRTIR PD LIKANDT K+DLETNKI +F KFDVGNVVMV GGRN GRVG+I
Sbjct: 112 IPYLNTYDGRTIRNPDQLIKANDTTKIDLETNKIMDFFKFDVGNVVMVIGGRNIGRVGVI 171
Query: 131 KN 132
KN
Sbjct: 172 KN 173
>gi|300174360|gb|ADJ68148.1| putative RpS4 protein [Cecidostiba fungosa]
Length = 119
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 60/77 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H I EAK+KLCK
Sbjct: 43 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCK 102
Query: 61 VRSVQFGQKGIPYINTY 77
VR VQ G KGIP++ T+
Sbjct: 103 VRRVQTGPKGIPFLVTH 119
>gi|444707815|gb|ELW48989.1| 40S ribosomal protein S4 [Tupaia chinensis]
Length = 239
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 63/81 (77%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD YPAGFMDV+SI K+ ENFRL+YDTKGRF +H I EEAK+KL KV
Sbjct: 63 QRFIEIDGKVRTDIPYPAGFMDVISIDKSGENFRLIYDTKGRFAVHRITPEEAKYKLRKV 122
Query: 62 RSVQFGQKGIPYINTYDGRTI 82
R + G KGIP++ T+D RT+
Sbjct: 123 RKIFEGTKGIPHLVTHDARTM 143
>gi|148691067|gb|EDL23014.1| mCG3585 [Mus musculus]
Length = 157
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 61/77 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTY 77
VR + G KGI ++ T+
Sbjct: 126 VRKIFVGTKGILHLVTH 142
>gi|288560121|ref|YP_003423607.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
gi|288542831|gb|ADC46715.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
Length = 244
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+VL+D + + D +P GFMD++SIPKT EN+R+L DTKGR LH I E+A+FKL K+ +
Sbjct: 70 NVLIDGRAKKDYKFPVGFMDILSIPKTGENYRILLDTKGRLTLHPISAEDAEFKLAKIVN 129
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +N +DGR + + A D + L++ +I E +F VV+VTGG++
Sbjct: 130 KSTIKGGKTQLNLHDGRNVIVEEDNYSAYDVVCLNIPEQEIKENFEFGEDVVVLVTGGKH 189
Query: 124 RGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G +G I+ + S T+ I+ A F T F IGK +P + L
Sbjct: 190 TGELGKIQEVIVDQSSKANTVIIEKANKDTFLTLKDYAFVIGK-DEPAIDL 239
>gi|390363321|ref|XP_788494.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
purpuratus]
Length = 79
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 60/76 (78%)
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
M+TGGRN GRVG I +REKH GSFE +HI+DA H +ATRLGNVF IGK K +VSLPKG
Sbjct: 1 MITGGRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKG 60
Query: 177 KGIKLSIIEEARKRQA 192
KGI+L+I EE KR A
Sbjct: 61 KGIRLTIAEEREKRIA 76
>gi|414877860|tpg|DAA54991.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 476
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 52 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
E FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 396 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 454
>gi|413943660|gb|AFW76309.1| putative ribosomal protein S4 (RPS4A) family protein, partial [Zea
mays]
Length = 414
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 57/66 (86%), Gaps = 2/66 (3%)
Query: 45 RLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKI 104
++HS +E FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLETNKI
Sbjct: 97 QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154
Query: 105 TEFIKF 110
+FIK
Sbjct: 155 MDFIKL 160
>gi|413943661|gb|AFW76310.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 182
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 57/66 (86%), Gaps = 2/66 (3%)
Query: 45 RLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKI 104
++HS +E FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLETNKI
Sbjct: 97 QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154
Query: 105 TEFIKF 110
+FIK
Sbjct: 155 MDFIKL 160
>gi|414877859|tpg|DAA54990.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 491
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 52 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
E FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 411 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 469
>gi|431897155|gb|ELK06417.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 155
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + +D KVRTD TYPAGFMD +SI KT ENFRL+Y TK RF +H I EEA +KLCKV
Sbjct: 71 QRFINIDGKVRTDMTYPAGFMDAISINKTRENFRLVYGTKCRFAVHRITTEEADYKLCKV 130
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDP 87
R + G K +P +D RTIRYP+P
Sbjct: 131 RKIFVGTKKVP----HDPRTIRYPNP 152
>gi|158563815|gb|ABW74359.1| ribosomal protein S4, partial [Modiolus modiolus]
Length = 73
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
R V KG+PY+ T+DGRTIRYPDPL+K NDT+ +D+ET KI +FIKFD GN+ M+TGG
Sbjct: 1 RKVGVALKGVPYVTTHDGRTIRYPDPLVKVNDTVMVDIETGKIKDFIKFDSGNLCMITGG 60
Query: 122 RNRGRVGIIKNRE 134
N GRVG++++RE
Sbjct: 61 HNLGRVGVVQHRE 73
>gi|255098783|gb|ACU00732.1| 40S ribosomal protein S4 [Nosema bombycis]
gi|326559168|gb|ADZ95623.1| 40S ribosomal protein S4 [Nosema bombycis]
Length = 172
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Query: 36 LLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTI 95
+LY +F +H I EA FKL KV S + + +PYI T DG RY DP I+ NDT+
Sbjct: 1 MLYSVDKKFHIHKIDKAEASFKLAKVISKKTMYEDVPYIFTNDGSCFRYCDPKIEVNDTV 60
Query: 96 KLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 155
K+DL + K+ +FI F+ VV V G + GRV +IK+ ++ S I ++D F
Sbjct: 61 KIDLASRKVVDFIPFETDKVVYVIKGEDMGRVCVIKHIKEVDYSDSIITVEDFAKKVFTI 120
Query: 156 RLGNVFTIGKGTKP-WVSLPKGKGIKLSIIEEA 187
N+ IG +SLP +GIKL+ +EE+
Sbjct: 121 PSKNLIVIGNSEDNLLISLPAQRGIKLNELEES 153
>gi|118431012|ref|NP_147175.2| 30S ribosomal protein S4 [Aeropyrum pernix K1]
gi|17380578|sp|Q9YF85.2|RS4E_AERPE RecName: Full=30S ribosomal protein S4e
gi|116062338|dbj|BAA79311.2| 30S ribosomal protein S4e [Aeropyrum pernix K1]
Length = 253
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
H VD VR D +P GFMDV+ + T E FR+L F+LH I +EE K ++ +
Sbjct: 70 HFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVKFFKLHPIPEEEGDLKPVRIEN 129
Query: 64 VQFGQKGIPYINTYDGRTI--RYPDP------LIKANDTIKLDLETNKITEFIKFDVGNV 115
+ G +N +DGR I R DP + + DT+ + + +I IKF G +
Sbjct: 130 KTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAI 189
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
++ GGRN GRVG++K+ +K G T + ++DA G+ F T L VF IG +P +SLP
Sbjct: 190 AIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLP 248
Query: 175 KG 176
+G
Sbjct: 249 EG 250
>gi|401878898|gb|AFQ30741.1| putative RpS4, partial [Hobbya stenonota]
gi|401878900|gb|AFQ30742.1| putative RpS4, partial [Hobbya stenonota]
gi|401878902|gb|AFQ30743.1| putative RpS4, partial [Hobbya stenonota]
Length = 114
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 56/72 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YPAGFMDV++I KTNE FRL+YD KGRF +H I EAK+KLCK
Sbjct: 43 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCK 102
Query: 61 VRSVQFGQKGIP 72
VR VQ G KGIP
Sbjct: 103 VRRVQTGPKGIP 114
>gi|414588670|tpg|DAA39241.1| TPA: putative threonine aldolase family protein [Zea mays]
Length = 472
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 52/59 (88%)
Query: 52 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
E FKL KVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 392 ETNMFKLYKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 450
>gi|209737924|gb|ACI69831.1| 40S ribosomal protein S4 [Salmo salar]
Length = 172
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 59/81 (72%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YD KGRF +H I EEA++KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRT 81
V+ G KG+P T R+
Sbjct: 126 VKKNLMGTKGVPATQTPSSRS 146
>gi|51011518|gb|AAT92168.1| ribosomal protein S4 [Ixodes pacificus]
Length = 81
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 60/74 (81%)
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK TKP++SLP+G
Sbjct: 1 MVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRG 60
Query: 177 KGIKLSIIEEARKR 190
KGIKLS+ EE +R
Sbjct: 61 KGIKLSVAEERDRR 74
>gi|344247051|gb|EGW03155.1| 40S ribosomal protein S4 [Cricetulus griseus]
Length = 176
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
VD KV TD YPAGF + ++I K+++N L+ DTKG F +H I +EAK KLC++R V
Sbjct: 67 VDGKVTTDVAYPAGFTNAITINKSSKNLCLVCDTKGHFIMHHITSKEAKNKLCRMRMVFV 126
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGN 114
G KGI + +D T+ YP+PLIK N T+ L+T+ I E KF+ N
Sbjct: 127 GTKGILNVMIHDKHTVHYPNPLIKVNGTVLDLLDTDNIIEVFKFNTDN 174
>gi|414869820|tpg|DAA48377.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 207
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 79/162 (48%), Gaps = 65/162 (40%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDV-VSIPKTNENFR--LLYD------------------ 39
+QRHVLVD KVRTDKTYPAGFM + +S+ + + L+ D
Sbjct: 70 LQRHVLVDGKVRTDKTYPAGFMGMPISLLMHKDTYTPILVADLWCHFFGRCHFHSLRQTR 129
Query: 40 TKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 99
T FRLH IRDE+AKFKLC RS+Q
Sbjct: 130 TTCCFRLHPIRDEDAKFKLCNGRSIQ---------------------------------- 155
Query: 100 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
FDVGNVVMVTGGRN GRVG+IKN EKHKG FE
Sbjct: 156 ----------FDVGNVVMVTGGRNTGRVGVIKNWEKHKGIFE 187
>gi|296109308|ref|YP_003616257.1| ribosomal protein S4E, central domain protein [methanocaldococcus
infernus ME]
gi|295434122|gb|ADG13293.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
infernus ME]
Length = 245
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +VR ++ P GFMDVVS+P+ NEN+R+L+D KGR +L+ E KLCK+++
Sbjct: 71 ILVDGRVRKEEKLPVGFMDVVSLPEANENYRVLFDRKGRVKLYPT--ENPDVKLCKIKNK 128
Query: 65 QFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR I+ DP + K DT+ + + +I + I F+VG +
Sbjct: 129 TVVKGGHIQLNLHDGRNIIIKVSDPTKAEEDVYKTGDTLLISIPDQEIKDHIPFEVGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+TGG++ G + I + EK + ++ G +F T VF IG KP + L
Sbjct: 189 YITGGKHVGEIAKIVDIEKKPLHKTVVTLETPDGEKFKTVKDYVFVIG-DEKPVIKL 244
>gi|414884682|tpg|DAA60696.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 169
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 51/56 (91%)
Query: 55 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKF 110
+FKLCKV S QFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DLET+KI +FIK
Sbjct: 92 EFKLCKVSSAQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDLETSKIMDFIKL 147
>gi|325958544|ref|YP_004290010.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
gi|325329976|gb|ADZ09038.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
Length = 241
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 4/174 (2%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD + R D YP GFMDV+ +PK+ + +R+L D KGR LH I ++ +FKLC+V
Sbjct: 71 ILVDGRARKDYKYPVGFMDVIELPKSEKVYRVLPDHKGRLILHPISEKNREFKLCRVTDK 130
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DGR + D + +++ K+T+ IKF+ G V ++ GG++
Sbjct: 131 TIIKGGKTQLNLHDGRNCIV-EKQYSTGDVVVVEIPEQKVTDHIKFESGTVGLIIGGKHI 189
Query: 125 GRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
G +G +K + S T+ ++ G F T VF +GK +P +SLP GK
Sbjct: 190 GELGKVKQINITQSSKPNTVEVETDEG-IFLTLADYVFVLGK-EEPVISLPGGK 241
>gi|124028167|ref|YP_001013487.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
gi|189045349|sp|A2BMD1.1|RS4E_HYPBU RecName: Full=30S ribosomal protein S4e
gi|123978861|gb|ABM81142.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
Length = 255
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 10/183 (5%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
H +D +VR + YP GFMDV+ I T E +R+L F LH I EEA+FKL ++
Sbjct: 70 HFKIDGRVRRNYKYPVGFMDVIEIVDTGEFYRVLPYPTRFFTLHPISKEEAQFKLGRIED 129
Query: 64 VQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKLDLETNKITEFIKFDVGN 114
+ G ++ +DGR IR DP K T+K+ + ++ + +VG+
Sbjct: 130 KSTVKGGHIQLHLHDGRNVLIRVSDPTNPVEAKPYKTLGTVKISIPEQQLLGYAPLEVGS 189
Query: 115 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSL 173
+V++ GGRN GRVG I + + + I+DA G + T L VF I +PW+SL
Sbjct: 190 LVIIFGGRNVGRVGRIVSIQPGMRRRGIVTIEDARGEKIQTSLEYVFVIAPPNEEPWISL 249
Query: 174 PKG 176
P+G
Sbjct: 250 PEG 252
>gi|379994415|gb|AFD22834.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
Length = 124
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 55/65 (84%)
Query: 73 YINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKN 132
++ T+DGRTIRYPDPLI+AND++K+DL + KITEF+KF+ GN M+TGG N GRVG++ N
Sbjct: 1 FVVTHDGRTIRYPDPLIRANDSVKVDLASGKITEFVKFETGNTCMITGGHNMGRVGVVTN 60
Query: 133 REKHK 137
EKH+
Sbjct: 61 VEKHE 65
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/54 (87%), Positives = 51/54 (94%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 340 NGTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 393
>gi|389860661|ref|YP_006362901.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
gi|388525565|gb|AFK50763.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
Length = 250
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
H +D +V D +P GFMDV+ I T+E +R++ I EEA FKLC++++
Sbjct: 67 HFEIDGRVVRDYKFPVGFMDVLRIKPTDEYYRVVPVPTKVIGFVKIPKEEAAFKLCRIQN 126
Query: 64 VQFGQKGIPYINTYDGRT--IRYPDPLIKAND------TIKLDLETNKITEFIKFDVGNV 115
+ G +N +DGR IR DP D T++L L NKI +++ N+
Sbjct: 127 KTTVKGGHIQLNLHDGRNVLIRVNDPRNPVEDVYETLGTVQLSLADNKIVDYVPLAENNL 186
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETIH-IQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
V+++GGRN GRVG++K + G ++ I+D G+ F T L VF IG+ KP ++LP
Sbjct: 187 VIISGGRNVGRVGLLKKVHRGMGVKRSVAVIEDKNGNLFQTSLSYVFVIGR-DKPLITLP 245
Query: 175 KG 176
+
Sbjct: 246 EA 247
>gi|350594665|ref|XP_003483943.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Sus scrofa]
Length = 221
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M R + +D KV TD TYPAGFMDVVSI KT E+F L+YDTKG F +H I EEAK+KLCK
Sbjct: 66 MPRFIKIDGKVCTDITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDG 79
V + G +GIP++ T+DG
Sbjct: 126 VGKIFMGIQGIPHLVTHDG 144
>gi|333987666|ref|YP_004520273.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
gi|333825810|gb|AEG18472.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
Length = 242
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD + R D +P GFMDV+ IPK+ + +R+L + KG L+ I E A+FKLC++
Sbjct: 71 ILVDGRARKDYKFPVGFMDVIEIPKSEKVYRILPNHKGNLVLYPITKENAEFKLCRIEDK 130
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DGR + K+ D + +++ +T IKF+ G + ++TGG++
Sbjct: 131 TTIKGGKTQLNLHDGRNCLV-EKEYKSGDVVVVEVPEQTVTNHIKFESGTIGLITGGKHI 189
Query: 125 GRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
G +G IK + S T+ I+ F T VF IGK KP +SLP G
Sbjct: 190 GELGKIKEINVTRSSKSNTVLIETDDKKTFLTLTDYVFVIGK-DKPVISLPGG 241
>gi|350594667|ref|XP_003483944.1| PREDICTED: hypothetical protein LOC100738356 [Sus scrofa]
Length = 365
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
M R + +D KV TD TYPAGFMDVVSI KT E+F L+YDTKG F +H I EEAK+KLCK
Sbjct: 66 MPRFIKIDGKVCTDITYPAGFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDG 79
V + G +GIP++ T+DG
Sbjct: 126 VGKIFMGIQGIPHLVTHDG 144
>gi|386001173|ref|YP_005919472.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
gi|357209229|gb|AET63849.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
Length = 211
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD K R D +P G DV+S+P ++NFRLL D KGRF LH + EA+ KLC++
Sbjct: 43 VLVDGKARKDLNFPVGIFDVISVPALDKNFRLLTDAKGRFNLHELEAGEAR-KLCRIEKK 101
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
Q G +N DG I + I L + +I++ I+F GN+ MV GG +
Sbjct: 102 TVLQGGKTQLNLNDGTNILAEGDYTTRSSVI-LSIPDKEISDVIEFKEGNLAMVVGGTHS 160
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G VG IK E K S I EF T + +VF IG+ KP + L
Sbjct: 161 GEVGTIKVIEVVKSSRPNRVIISG-KEEFETTVDHVFMIGR-DKPAIKL 207
>gi|414868178|tpg|DAA46735.1| TPA: hypothetical protein ZEAMMB73_851694 [Zea mays]
Length = 411
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 49/51 (96%)
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+K+DLETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 353 VKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 403
>gi|160948194|emb|CAO94698.1| putative ribosomal protein S4 [Pomphorhynchus laevis]
Length = 137
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +P+GFMDV++I KTNENFRL+YD KGRF +H I +EEA +KLC+V
Sbjct: 65 QRDIKVDGKVRTDFRFPSGFMDVITIDKTNENFRLIYDVKGRFVVHRITNEEASYKLCQV 124
Query: 62 RSVQFGQKGIPYI 74
+ Q G KG+P++
Sbjct: 125 TNAQTGFKGVPFL 137
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 50/54 (92%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFDVGNVVM+TGGRN G VG+IKNREKHKGSFETIH+
Sbjct: 188 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTGHVGVIKNREKHKGSFETIHV 241
>gi|223477731|ref|YP_002582376.1| 30S ribosomal protein S4e [Thermococcus sp. AM4]
gi|214032957|gb|EEB73785.1| SSU ribosomal protein S4e [Thermococcus sp. AM4]
Length = 243
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEAK K ++ +
Sbjct: 71 ILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNK 130
Query: 65 QFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + +N +DG ++ D K + TI + + +I E I F+VG V VT
Sbjct: 131 RMVKGAKVQLNLHDGSNHLVSLAEKDSF-KTSYTIIMKVPEREIVEVIPFEVGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G I++ R G + + I+D G +F T F +GK KP +SLP
Sbjct: 190 GKNVARKGRIVEVRHFPMGWPDVVTIEDESGEKFDTLKEYAFVVGK-EKPEISLP 243
>gi|408381909|ref|ZP_11179456.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
gi|407815357|gb|EKF85942.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
Length = 241
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD + R D +P GFMDV+ +PK+ + +R++ D KG LH I + + +FKLC++
Sbjct: 71 VLVDGRARKDYKFPVGFMDVIQLPKSGKAYRVVPDEKGELVLHPIEEGDTQFKLCRIEDK 130
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DGR + K D + L++ +I + IKF+ G + ++TGG++
Sbjct: 131 VTIKGGKTQLNLHDGRNYLTEEDY-KTGDVVLLNVPDQEIKDTIKFEDGAIGLITGGKHI 189
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
G G +K + S + + F T VF +GK KP +SLP G+
Sbjct: 190 GEKGTVKEINITRSSMPNTVLIETDETTFQTLQEYVFVLGK-DKPVISLPGGQ 241
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 50/54 (92%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFDVGNVVM+TGG N GRVG+IKNREKHKGSFETIH+
Sbjct: 303 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGTNTGRVGVIKNREKHKGSFETIHV 356
>gi|410721705|ref|ZP_11361035.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
gi|410598451|gb|EKQ53024.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
Length = 241
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD ++R D +P GFMDV+ +P + + +R++ + +G LH I + +FKLC++
Sbjct: 71 ILVDGRIRKDYKFPVGFMDVIQLPTSGKAYRVVPNERGTLVLHPIEEGNTEFKLCRIEDK 130
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DGR + K D + L++ +I E IKF+ G + ++TGG++
Sbjct: 131 VTIKGGKTQLNLHDGRNYLTEEDY-KTGDVVVLNVPDQEIKETIKFEDGAIGLITGGKHI 189
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGK 177
G G +K + S + + G F T VF +GK KP +SLP G+
Sbjct: 190 GEKGTVKEINITRSSMPNTILIETDGTTFQTLQEYVFVLGK-DKPMISLPGGQ 241
>gi|402697608|gb|AFQ90989.1| X-linked ribosomal protein S4, partial [Draco sumatranus]
Length = 193
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 69/143 (48%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+S K EB RL+ DTKGRF +H I EEAK+KLCK
Sbjct: 51 MQRFIKIDGKVRTDITYPXGFMDVISXEKXGEBXRLVXDTKGRFAVHRIXPEEAKYKLCK 110
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++
Sbjct: 111 VRKIFVGTKGIPHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 170
Query: 121 GRNRGRVGIIKNREKHKGSFETI 143
R+G+I N E+H GSF+ +
Sbjct: 171 XXXXXRIGVITNXERHPGSFDVV 193
>gi|333910781|ref|YP_004484514.1| 30S ribosomal protein S4 [Methanotorris igneus Kol 5]
gi|333751370|gb|AEF96449.1| 30S ribosomal protein S4e [Methanotorris igneus Kol 5]
Length = 244
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD + R + +P G MDVVSIP TNE+FR L+D KGR L E KLC++R+
Sbjct: 71 ILVDGRKRKEHKFPVGLMDVVSIPDTNEHFRALFDEKGRIVLRPT--ENPDVKLCRIRNK 128
Query: 65 QFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR IR DP + K D I + + +I I F+VG +
Sbjct: 129 TVVKGGHIQLNLHDGRNHLIRVSDPTKAEEDVYKTGDVILMGIPEQEIKAHIPFEVGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+TGG++ G I + EK + I +++A G +F T VF +G
Sbjct: 189 YITGGKHIGEFAKIVDIEKRILYPDIITLENADGEKFKTIKDYVFVVG 236
>gi|312137088|ref|YP_004004425.1| 30S ribosomal protein S4e [Methanothermus fervidus DSM 2088]
gi|311224807|gb|ADP77663.1| SSU ribosomal protein S4E [Methanothermus fervidus DSM 2088]
Length = 240
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 4/173 (2%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD + R D +P GFMD++ IPK ++++R+L D KGR LH ++EE ++KLCK+ +
Sbjct: 71 ILVDGRPRKDHKFPVGFMDLLEIPKIDKSYRVLIDKKGRLYLHETKEEE-RYKLCKILNK 129
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DGR D K D IKL + +I + I+F GN+ +TGG++
Sbjct: 130 TTVKGGKIQLNLHDGRN-HLVDNDFKTGDVIKLRIPDQEILDKIEFKEGNLAFITGGKHV 188
Query: 125 GRVGIIKNREKHKG-SFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
G + ++ K + T+ ++ G F T VF IG+ +P + LP+G
Sbjct: 189 GEIARVEKINIIKAPTPNTVILKSRDGKMFETIHEYVFMIGE-KEPVIPLPEG 240
>gi|337283657|ref|YP_004623131.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
gi|334899591|gb|AEH23859.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
Length = 248
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD KVR D +P G MDVVSIP+T E++R+L + G+ LH I +EEAK K ++R+
Sbjct: 71 ILVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKIKPFRIRNK 130
Query: 65 QFGQKGIPYINTYDGRT--IRYPDPL------IKANDTIKLDLETNKITEFIKFDVGNVV 116
+ + G +N +DG IR +DT+ + + +I E + F+VG V
Sbjct: 131 RMVKGGNLQLNLHDGSNHLIRLSSLTDETKDRYHTSDTLIMRVPEREIIEVLPFEVGAYV 190
Query: 117 MVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
VT G+N R G I++ R G + + I+D G F T F +GK + P +SLP
Sbjct: 191 FVTQGKNVARKGRIVEIRHFPMGWPDVVTIEDEEGELFDTLKEYAFVVGKDS-PRISLP 248
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 50/54 (92%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFDVGNVVM+TGGRN RVG+IKNREKHKGSFETIH+
Sbjct: 158 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTMRVGVIKNREKHKGSFETIHV 211
>gi|240104047|ref|YP_002960356.1| 30S ribosomal protein S4e [Thermococcus gammatolerans EJ3]
gi|239911601|gb|ACS34492.1| SSU ribosomal protein S4E (rps4E) [Thermococcus gammatolerans EJ3]
Length = 243
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEAK K ++ +
Sbjct: 71 ILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNK 130
Query: 65 QFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + +N +DG ++ D + + TI + + +I E I F+VG V VT
Sbjct: 131 RMVKGARVQLNLHDGSNHLVSLAEKDSF-RTSYTIIMKVPEREIIEVIPFEVGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G I++ R G + + I+D G +F T F +GK KP +SLP
Sbjct: 190 GKNVARKGRIVEVRHFPMGWPDVVTIEDESGEKFDTLKEYAFVVGK-EKPEISLP 243
>gi|413950347|gb|AFW82996.1| hypothetical protein ZEAMMB73_922081 [Zea mays]
Length = 138
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 49/51 (96%)
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+K++LETNKI +FIKFDVGNVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 80 VKINLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 130
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFDVGNVVMVT GRN G VG+IKNREKHKGSFETIH+
Sbjct: 210 NGTIKIDLETNKIMDFIKFDVGNVVMVTSGRNTGHVGVIKNREKHKGSFETIHV 263
>gi|119620364|gb|EAW99958.1| hCG1789217 [Homo sapiens]
Length = 96
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 55/76 (72%)
Query: 22 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 81
MDV+SI KT EN RL+YDTKG +H I EEAK+KLCKVR + G KGIP++ +D T
Sbjct: 1 MDVISIDKTGENVRLIYDTKGHSAVHHITSEEAKYKLCKVRKIFVGTKGIPHLVIHDVHT 60
Query: 82 IRYPDPLIKANDTIKL 97
I YPDPLIK ++ +L
Sbjct: 61 IHYPDPLIKVSNRFRL 76
>gi|315229869|ref|YP_004070305.1| 30S ribosomal protein S4e [Thermococcus barophilus MP]
gi|315182897|gb|ADT83082.1| SSU ribosomal protein S4e [Thermococcus barophilus MP]
Length = 248
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFK------- 57
+LVD K R D +P G MDVVSIP+T E++R+L + G+ LH I +EEAK K
Sbjct: 71 ILVDGKARKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKIKPLRITRK 130
Query: 58 -LCKVRSVQFG-QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+ K ++Q G G Y+ T D K + T+ + + +ITE + F++G
Sbjct: 131 VMVKGGNLQIGFHDGTNYLVKLSSLTDEVKD-RFKTSYTVFMKMPEREITEILPFEIGAY 189
Query: 116 VMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
V VT G+N R+G I++ R G + + I+D G F T F IGK KP +SLP
Sbjct: 190 VFVTQGKNVARIGKIVEVRHFPAGWPDVVTIEDQEGELFDTLKEYAFVIGK-DKPGISLP 248
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFDVGN VMVTGGRN RVG+IKN EKHKGSFETIH+
Sbjct: 205 NGTIKIDLETNKIMDFIKFDVGNAVMVTGGRNTVRVGVIKNMEKHKGSFETIHV 258
>gi|414888286|tpg|DAA64300.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
Length = 387
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+K+DLETNKI +FIKFDVGNVVMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 329 VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 379
>gi|256810634|ref|YP_003128003.1| 30S ribosomal protein S4e [Methanocaldococcus fervens AG86]
gi|256793834|gb|ACV24503.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
fervens AG86]
Length = 244
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 10/168 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +VR ++ P G MDVVS+P NEN+R+L+D KGR +L E KLCK+++
Sbjct: 71 VLVDGRVRKEEKLPVGLMDVVSLPDANENYRVLFDRKGRVKLKPT--ENPDVKLCKIKNK 128
Query: 65 QFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR I+ DP + K DT+ + + +I I F+VG +
Sbjct: 129 TVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+TGG++ G I + EK + + +++ G +F T VF +G
Sbjct: 189 YITGGKHIGDFARIVDIEKRGIYPDIVTLENLEGDKFKTVKDYVFVVG 236
>gi|126465928|ref|YP_001041037.1| 30S ribosomal protein S4 [Staphylothermus marinus F1]
gi|189045360|sp|A3DNB9.1|RS4E_STAMF RecName: Full=30S ribosomal protein S4e
gi|126014751|gb|ABN70129.1| SSU ribosomal protein S4E [Staphylothermus marinus F1]
Length = 252
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
H VD +VR + YP G MDV+ I T E +R++ L I EEAK+KL ++ +
Sbjct: 70 HFKVDGRVRKNYKYPVGLMDVIEIVDTGETYRVIPVPVKVLGLIEIDKEEAKYKLSRIEN 129
Query: 64 VQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNV 115
+ G +N +DGR I+ DP + K T+++ + +I +I D G +
Sbjct: 130 KTTVKGGHIQLNLHDGRNVLIKVSDPKNPVEDIYKTLGTLQISIPEQQILNYIPLDEGTL 189
Query: 116 VMVTGGRNRGRVGIIKNREKHKG---SFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 172
V+++GGRN GRVG K HKG + I+D G++F T L VF IGK +P +
Sbjct: 190 VIISGGRNVGRVG--KVVSIHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPIGK-EEPLIK 246
Query: 173 LPKG 176
LP+G
Sbjct: 247 LPEG 250
>gi|413948894|gb|AFW81543.1| hypothetical protein ZEAMMB73_624427 [Zea mays]
Length = 76
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 49/51 (96%)
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+K+DLETNKI +FIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 18 VKIDLETNKIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 68
>gi|15668645|ref|NP_247443.1| 30S ribosomal protein S4e [Methanocaldococcus jannaschii DSM 2661]
gi|1710764|sp|P54039.1|RS4E_METJA RecName: Full=30S ribosomal protein S4e
gi|1591170|gb|AAB98457.1| SSU ribosomal protein S4E [Methanocaldococcus jannaschii DSM 2661]
Length = 244
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 10/168 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +VR ++ P G MDVVS+P NEN+R+L+D KGR +L E KLCK+++
Sbjct: 71 VLVDGRVRKEEKLPVGLMDVVSLPDANENYRVLFDRKGRIKLKPT--ENPDVKLCKIKNK 128
Query: 65 QFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR I+ DP + K DT+ + + +I I F+VG +
Sbjct: 129 TVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+TGG++ G I E+ + + +++ G +F T VF +G
Sbjct: 189 YITGGKHVGDFAKIVEIERRGIYPDIVTLENMDGEKFKTVKDYVFVVG 236
>gi|435852126|ref|YP_007313712.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
gi|433662756|gb|AGB50182.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
Length = 237
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +R D +P G +DVVSIPK +++R+L D KGR LH + E+ KLC++
Sbjct: 66 ILVDGIIRKDLRFPIGLLDVVSIPKMEQSYRVLLDRKGRLELHKLEGTESS-KLCRILGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N DG + + KA D++ L + KI IK++VGN+ ++ GG++
Sbjct: 125 TVIKGGKVQLNLNDGSNLIGSNDY-KAKDSVILSVPDKKILTHIKYEVGNLALIIGGKHT 183
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G++G IK+ + S + G EF T V IG KP + L
Sbjct: 184 GKIGAIKDINTVRSSNSNTVLIAGEGEEFHTIEDYVVVIGT-DKPEIKL 231
>gi|375083281|ref|ZP_09730307.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
gi|374742012|gb|EHR78424.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
Length = 248
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +VR D +P G MDVVSIP+T E++R+ + G+ LH I +EEAK K ++ +
Sbjct: 71 VLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVFPNRIGKLILHPISEEEAKIKPLRINNK 130
Query: 65 QFGQKGIPYINTYDGR---------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNV 115
+ + G +N +DG T D K +DT+ + + +I E + F++G
Sbjct: 131 RMVKGGNLQLNFHDGTNHLIKLSSLTDETKDQF-KTSDTVLMKVPEREIVEVLSFEIGAY 189
Query: 116 VMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
V V G+N RVG I++ R G + + I+D G F T F +GK +P +SLP
Sbjct: 190 VFVVQGKNVARVGKIVEVRHFPGGWPDVVTIEDKEGELFDTLKDYAFVLGK-EEPKISLP 248
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFD+ NVVMVT GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 235 NGTIKIDLETNKIMDFIKFDIDNVVMVTSGRNTGRVGVIKNREKHKGSFETIHV 288
>gi|242398292|ref|YP_002993716.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
gi|242264685|gb|ACS89367.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
Length = 248
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 12/183 (6%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+ VLVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEAK K ++
Sbjct: 68 EEKVLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPITEEEAKLKPLRI 127
Query: 62 RSVQFGQKGIPYINTYDGR---------TIRYPDPLIKANDTIKLDLETNKITEFIKFDV 112
+ + + G +N +DG T D + DT+ + + +I E + F+V
Sbjct: 128 SNKRMVKGGNLQLNFHDGTNHLVKLSSLTDETKDSF-RTADTVLVKVPEREIVEVVPFEV 186
Query: 113 GNVVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWV 171
G V V G+N RVG I++ R G + + I+D G F T F +GK +P +
Sbjct: 187 GAFVFVVQGKNVARVGKIVEVRHFPGGWPDVVTIEDRDGELFDTLKDYAFVLGK-EEPRI 245
Query: 172 SLP 174
SLP
Sbjct: 246 SLP 248
>gi|413947184|gb|AFW79833.1| putative leucine-rich repeat receptor-like protein kinase family
protein [Zea mays]
Length = 368
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 44/45 (97%)
Query: 55 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 99
+FKLCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DL
Sbjct: 324 QFKLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDL 368
>gi|288931522|ref|YP_003435582.1| ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
gi|288893770|gb|ADC65307.1| Ribosomal protein S4E, central domain protein [Ferroglobus placidus
DSM 10642]
Length = 232
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+LVD R D +P G DVVS+PK + N+R+++D KGR+ I D + KL K+
Sbjct: 62 EILVDGVPRKDYKFPVGLFDVVSVPKLDLNYRIVFDEKGRYVPIEITDPD--LKLYKITG 119
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +N +DG I + K D+I + + +I + +KF+ G +VMVTGG +
Sbjct: 120 KTMVKGGRIQLNLFDGTNILASNEY-KTKDSILMKIPEKEIVDHLKFEEGALVMVTGGTH 178
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG--TKPWVSL 173
G +GI+K + + S + + G+EF T VF IGK TKP + L
Sbjct: 179 AGEIGILKEYKIVRSSAPNLVTIEVEGNEFTTIEDYVFVIGKKGETKPVIQL 230
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 49/54 (90%)
Query: 92 NDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
N TIK+DLETNKI +FIKFDV NVVM++GGRN G VG+IKNREKHKGSFETIH+
Sbjct: 218 NGTIKIDLETNKIMDFIKFDVDNVVMMSGGRNTGHVGVIKNREKHKGSFETIHV 271
>gi|57641464|ref|YP_183942.1| 30S ribosomal protein S4e [Thermococcus kodakarensis KOD1]
gi|73919021|sp|Q5JJG0.1|RS4E_PYRKO RecName: Full=30S ribosomal protein S4e
gi|57159788|dbj|BAD85718.1| SSU ribosomal protein S4E [Thermococcus kodakarensis KOD1]
Length = 243
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEAK K ++ +
Sbjct: 71 ILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNK 130
Query: 65 QFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + +N +DG ++ D K + T+ + + +I + + F+VG V VT
Sbjct: 131 RMVKGAKVQLNLHDGSNHLVSLAEKD-AYKTSYTVIMQVPERQIVKVLPFEVGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G I++ R+ G + + I+D G F T F IGK KP +SLP
Sbjct: 190 GKNVARKGKIVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVIGK-DKPEISLP 243
>gi|148642809|ref|YP_001273322.1| 30S ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222445040|ref|ZP_03607555.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
DSM 2375]
gi|261350391|ref|ZP_05975808.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
gi|189045354|sp|A5UL76.1|RS4E_METS3 RecName: Full=30S ribosomal protein S4e
gi|148551826|gb|ABQ86954.1| ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
gi|222434605|gb|EEE41770.1| Ribosomal family S4e [Methanobrevibacter smithii DSM 2375]
gi|288861174|gb|EFC93472.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
Length = 242
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+VLVD +V D +P GFMD++ IPKT E +R+L D KGR +L+ I EE KLCK+ +
Sbjct: 70 NVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVN 127
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +N +DG+ + + D I L + ++I E + G V++TGG++
Sbjct: 128 KSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKH 187
Query: 124 RGRVGIIKNREKHKGSF-ETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G +G + ++ S TI I+++ EF T F +G+ P +SL
Sbjct: 188 TGELGTVSEIIVNESSNPNTIIIENSAKDEFLTLKDYAFVVGEDA-PAISL 237
>gi|289193204|ref|YP_003459145.1| ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
gi|288939654|gb|ADC70409.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
sp. FS406-22]
Length = 244
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 10/168 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +VR ++ P G MDVVS+P+ +EN+R+L+D KGR +L E KLCK+++
Sbjct: 71 VLVDGRVRKEEKLPVGLMDVVSLPEADENYRVLFDRKGRIKLKPT--ENPDVKLCKIKNK 128
Query: 65 QFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR I+ DP + K DT+ + + +I I F+VG +
Sbjct: 129 TVIKGGHIQLNLHDGRNIVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+TGG++ G I E+ + + +++ G +F T VF +G
Sbjct: 189 YITGGKHVGDFAKIVEIERRGIYPDIVTLENMDGEKFKTVKDYVFVVG 236
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 11 VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG---------------RFRLHSIRDEEAK 55
VRT + Y G+M T EN L+ G RF DEE
Sbjct: 76 VRTCRLYVQGWM------VTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTDEEGA 129
Query: 56 FKLCKVRSVQFGQKGI----------PYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT 105
+ + G + P T+ R + L + ++DLETNKI
Sbjct: 130 RAALNLSGTELGYYPVNVLPSKTAIAPVNETFLPRVTQADLKLFFESICGEIDLETNKIM 189
Query: 106 EFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+FIKFDV NVVMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 190 DFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 229
>gi|218884474|ref|YP_002428856.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
gi|254764558|sp|B8D5V8.1|RS4E_DESK1 RecName: Full=30S ribosomal protein S4e
gi|218766090|gb|ACL11489.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
Length = 252
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
+D +VR D +P G MDV+ I N+ +R++ L I EEA FKLC++ +
Sbjct: 73 IDGRVRRDYKFPVGVMDVIEIVGVNKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTT 132
Query: 67 GQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLETNKITEFIKFDVGNVVMV 118
+ G +N +DGR IR DP DT +KL + +I +++ G + +V
Sbjct: 133 VKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIV 192
Query: 119 TGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
+GGRN GRVG I + K + +I ++D G++F T L +F IG KP + LP+G
Sbjct: 193 SGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-EKPLIKLPEG 250
>gi|432091279|gb|ELK24482.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 203
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG F LH I EEAK+ LCK
Sbjct: 81 MQRFIKIDDKVRTDITYPAGFMDVISIDKTAENFRLIYDTKGHFALHCITPEEAKYNLCK 140
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 138 GSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSA 197
GSF+ +H++DA G+ FA +L N+F KG KPW+SLP GKGI L+I EE KR A S+
Sbjct: 145 GSFDVVHVKDANGNSFAIQLSNIFV--KGNKPWISLPHGKGIHLTIAEERDKRLAAKQSS 202
>gi|390938979|ref|YP_006402717.1| 30S ribosomal protein S4E, central domain-containing protein
[Desulfurococcus fermentans DSM 16532]
gi|390192086|gb|AFL67142.1| Ribosomal protein S4E, central domain protein [Desulfurococcus
fermentans DSM 16532]
Length = 252
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
+D +VR D +P G MDV+ I N+ +R++ L I EEA FKLC++ +
Sbjct: 73 IDGRVRRDYKFPVGVMDVIEIVGINKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTT 132
Query: 67 GQKGIPYINTYDGRT--IRYPDPLIKANDT------IKLDLETNKITEFIKFDVGNVVMV 118
+ G +N +DGR IR DP DT +KL + +I +++ G + +V
Sbjct: 133 VKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIV 192
Query: 119 TGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
+GGRN GRVG I + K + +I ++D G++F T L +F IG KP + LP+G
Sbjct: 193 SGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-EKPLIKLPEG 250
>gi|320101354|ref|YP_004176946.1| 30S ribosomal protein S4 [Desulfurococcus mucosus DSM 2162]
gi|319753706|gb|ADV65464.1| SSU ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
Length = 252
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
H VD KVR D +P G MDV+ + +T E +R++ L I EEA FKLC++ +
Sbjct: 70 HFKVDGKVRKDYKFPVGLMDVIEVVETGELYRVIPVPTRVLGLVKIPREEASFKLCRIEN 129
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKAND-------------TIKLDLETNKITEFIKF 110
+ G +N +DGR + L++ ND +KL + ++ ++I
Sbjct: 130 KVTVKGGHIQLNLHDGRNL-----LVRVNDARNPVEDVYETLGAVKLSIPVQQLLDYIPL 184
Query: 111 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGTKP 169
G + +V+GGRN GRVG + + + + +I I+D G+ F T L +F IG KP
Sbjct: 185 KEGVIAIVSGGRNVGRVGKVVSIHRGMKRYRSIVTIEDRSGNRFQTSLDYIFPIGL-EKP 243
Query: 170 WVSLPKG 176
++LP+G
Sbjct: 244 LITLPEG 250
>gi|409096171|ref|ZP_11216195.1| 30S ribosomal protein S4e [Thermococcus zilligii AN1]
Length = 243
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEAK K ++ +
Sbjct: 71 VLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRITNK 130
Query: 65 QFGQKGIPYINTYDGRT--IRYPDP-LIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ + +N +DG + + + + + T+ + + +I E I F+VG V VT G
Sbjct: 131 RMVKGSKVQLNLHDGSNHLVGFAEKDSFRTSYTVLMKVPEREIVEVIPFEVGAYVFVTQG 190
Query: 122 RNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
+N R G +++ R+ G + + I+D G +F T F +GK +P +SLP
Sbjct: 191 KNVARRGKVVEIRQFPMGWPDVVTIEDENGEKFDTLKEYAFVLGK-DRPIISLP 243
>gi|414888288|tpg|DAA64302.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
Length = 76
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
+K+DLETNKI +FIKFDVGNVVMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 18 VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 68
>gi|261402344|ref|YP_003246568.1| 30S ribosomal protein S4e [Methanocaldococcus vulcanius M7]
gi|261369337|gb|ACX72086.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
vulcanius M7]
Length = 244
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 10/168 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD +VR ++ P G MDVVS+P+ +EN+R+L+D KGR +L E KLCK+++
Sbjct: 71 VFVDGRVRKEEKLPVGLMDVVSLPEADENYRVLFDRKGRVKLKPT--ENPDVKLCKIKNK 128
Query: 65 QFGQKGIPYINTYDGR--TIRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR I+ DP + K DT+ + + +I I F+VG +
Sbjct: 129 TVVKGGHIQLNLHDGRNVVIKVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+TGG++ G I E+ + + +++ G +F T VF +G
Sbjct: 189 YITGGKHVGDFAKIVEIERRGIYPDIVTLENMEGEKFKTVKDYVFVVG 236
>gi|374635652|ref|ZP_09707246.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
gi|373561505|gb|EHP87738.1| Ribosomal protein S4E, central domain protein [Methanotorris
formicicus Mc-S-70]
Length = 244
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 10/168 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD + R + +P GFMDV+SIP TNE+FR L+D KGR L E KLC++++
Sbjct: 71 ILVDGRKRKEHKFPVGFMDVISIPDTNEHFRALFDEKGRIVLRPT--ENPDVKLCRIKNK 128
Query: 65 QFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR IR +P + K D + + + +I I F+VG +
Sbjct: 129 TVVKGGHIQLNLHDGRNHLIRVSNPTKAEEDVYKTGDVVLMGVPEQEIKAHIPFEVGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+TGG++ G I + EK + I ++++ G +F T VF IG
Sbjct: 189 YITGGKHIGEFVKIVDIEKRVFYPDIITLENSDGEKFKTIKDYVFVIG 236
>gi|159145674|gb|ABW90374.1| putative ribosomal protein S4 [Sipunculus nudus]
Length = 67
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%)
Query: 132 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQ 191
+RE+H GSFE +HI+DA+GH FATRL NVF IGKG KPW+SLP+GKG+KL+I EE +R
Sbjct: 3 HRERHPGSFEIVHIRDAVGHSFATRLTNVFIIGKGNKPWISLPRGKGVKLTIAEERDRRI 62
Query: 192 A 192
A
Sbjct: 63 A 63
>gi|84489695|ref|YP_447927.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
gi|121729294|sp|Q2NFW9.1|RS4E_METST RecName: Full=30S ribosomal protein S4e
gi|84373014|gb|ABC57284.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
Length = 241
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD R + +P GFMDV+SIPK N+ FR+L D KGR L I ++++ FKL K+
Sbjct: 71 VLVDGIPRKNHRFPVGFMDVISIPKINKTFRVLQDYKGRLVLKEIEEKDSTFKLVKILGK 130
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N GR I D K D + L++ KI++ IKF+ G + ++TGG++
Sbjct: 131 TTIKGGKTQLNLEGGRNIIADDDY-KTGDVLLLNIPEQKISDSIKFEEGALGLITGGKHI 189
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
VG I + + S + + F T VF +G+ KP +SL
Sbjct: 190 SEVGKIDEIKITQSSKSNTVLMETEEGSFLTLARYVFVVGQ-DKPVISL 237
>gi|341582050|ref|YP_004762542.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
gi|340809708|gb|AEK72865.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
Length = 243
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA K ++ +
Sbjct: 71 ILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEKEANIKPLRISNK 130
Query: 65 QFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + +N +DG T+ D + A+ T+ + + ++ E + F+VG V VT
Sbjct: 131 RMVKGAKVQLNLHDGSNHLVTMDEKDRYMTAS-TVLMKVPEREVIEVLPFEVGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G +++ R+ G + + I+D G F T F +GK KP +SLP
Sbjct: 190 GKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVVGK-EKPEISLP 243
>gi|390960782|ref|YP_006424616.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
gi|390519090|gb|AFL94822.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
Length = 243
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +VR D +P G MDV+SIP+T E++R+L + G+ LH I ++EA K ++ +
Sbjct: 71 ILVDGRVRKDYKFPVGIMDVISIPETGEHYRVLPNRIGKLILHPISEKEANIKPLRISNK 130
Query: 65 QFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + +N +DG TI D + A T+ + + ++ E + F+VG V VT
Sbjct: 131 RMVKGAKVQLNLHDGSNHLVTIDEKDKYMTAY-TVLMKVPDREVIEVLPFEVGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G +++ R+ G + + I+D G F T F +GK KP +SLP
Sbjct: 190 GKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVVGK-DKPEISLP 243
>gi|431899548|gb|ELK07511.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 76
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 22 MDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 81
MDV+SI KT +NF L+YDT+GRF + + E+AKFK CKVR + G KGIP++ T+D
Sbjct: 1 MDVISIDKTRQNFLLVYDTQGRFAIDRMTPEKAKFKSCKVRKIFVGTKGIPHLETHDA-- 58
Query: 82 IRYPDPLIKANDTIKLDL 99
RYPDPLI+ N TI++D+
Sbjct: 59 -RYPDPLIEVNGTIQIDI 75
>gi|14591522|ref|NP_143603.1| 30S ribosomal protein S4e [Pyrococcus horikoshii OT3]
gi|6647808|sp|O59430.1|RS4E_PYRHO RecName: Full=30S ribosomal protein S4e
gi|3258198|dbj|BAA30881.1| 243aa long hypothetical 30S ribosomal protein S4 [Pyrococcus
horikoshii OT3]
Length = 243
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 9/175 (5%)
Query: 6 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQ 65
LVD KVR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA K ++R+ +
Sbjct: 72 LVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLVLHPISEEEANIKPLRIRNKR 131
Query: 66 FGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETNKITEFIKFDVGNVVMVTG 120
+ +N +DG + PL + ++ T+ + + +I E + F+ G V VT
Sbjct: 132 MVKGAKVQLNFHDGTN--HLIPLTEKDNYFTSYTVLMKVPEREIMEVLPFEKGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G I++ ++ G + + I+D G F T F +GK KP +SLP
Sbjct: 190 GKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGK-DKPKISLP 243
>gi|284162448|ref|YP_003401071.1| 30S ribosomal protein S4E, central domain-containing protein
[Archaeoglobus profundus DSM 5631]
gi|284012445|gb|ADB58398.1| Ribosomal protein S4E, central domain protein [Archaeoglobus
profundus DSM 5631]
Length = 232
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+LVD R D +P G DV+ IPK N+++R+++D KGR+ I D+ KL K+ +
Sbjct: 62 EILVDGVPRKDYKFPVGLFDVIKIPKLNKSYRMVFDEKGRYVPIEIEDDN--LKLYKIVN 119
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +N +DG + D K D+I +++ KI +++ F++G +VM+TGG +
Sbjct: 120 KTTIKGGRIQLNLFDGTNV-LGDNSFKTKDSILMEIPEKKIVDYLPFEIGALVMITGGTH 178
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GTKPWVSL 173
G +G IK+ + + S + + G E T VF IGK KP + L
Sbjct: 179 AGEIGRIKDYKIVRSSSPNLVTVEVEGRELTTIEDYVFVIGKKDDEKPVIDL 230
>gi|289597181|ref|YP_003483877.1| ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
gi|289534968|gb|ADD09315.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
boonei T469]
Length = 236
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R V VD +V D +P GFMDV+SI N+++R +YD G R+ I ++ A++KL ++
Sbjct: 63 SRKVKVDGRVVRDVKFPIGFMDVISIGDINKHYRAVYDVNGNMRIVEIPEDHAEWKLVRI 122
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G +N +DGR I + K D +K+ L T +I G+V +VTGG
Sbjct: 123 ENKSVVPGGKIQLNLHDGRNILLDENKYKTGDVLKIKLPTQEILSHYPLAEGSVAIVTGG 182
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
+RGRV IK + + + ++ G E R VF IG G KP +++P+
Sbjct: 183 THRGRVAHIKEYVVVRSPQDNM-VRFEEGFEIPKRY--VFVIGVG-KPEITIPE 232
>gi|327400860|ref|YP_004341699.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
gi|327316368|gb|AEA46984.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
Length = 231
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+LVD + R D +P G DV+SIPK +++R+L+D KGR+ I D+ K KL K+ +
Sbjct: 62 EILVDGRPRKDYKFPVGLFDVISIPKLGKSYRILFDDKGRYIPKEIGDD--KLKLYKIVN 119
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +N +DG I D K D++ L+L KI + +KF+ G +VM+ GG +
Sbjct: 120 KTIVKGGKVQLNLFDGTNI-LADNTYKTKDSVLLELPEKKIVDHLKFEEGALVMIVGGTH 178
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGT-KPWVSL 173
G +G IK + +GS + ++ T +VF +GK KP + L
Sbjct: 179 AGEIGRIKEYKVVRGSAPNLVTIESEKGVITTIEDHVFVVGKPDGKPVIDL 229
>gi|302348026|ref|YP_003815664.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
gi|302328438|gb|ADL18633.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
Length = 250
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
V VD KV D +P G MD+V +P N +R++ D G RL I EEA KL ++
Sbjct: 70 QVKVDGKVVRDYKFPIGVMDIVELPSLNLYYRVVPDPTGTLRLVPISKEEASLKLLRIEG 129
Query: 64 VQFGQKGIPYINTYDGRTI-------RYPDPL-IKANDTIKLDLETNKITEFIKFDVGNV 115
V + G ++ DGR + R P L K D++ L++ + + I+F G++
Sbjct: 130 VTTLKGGHFQVHLSDGRNVLVRVEDSRKPGQLPYKPLDSLVLNVPEGTVKDHIEFKEGSL 189
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
+V GRN G++G I + + G ++ +QD+ G+ F T L N++ +G+ KP V++
Sbjct: 190 ALVVWGRNMGKLGKIVSVTRGWGWDRSVASLQDSAGNSFETSLSNIYVVGR-DKPVVTVT 248
Query: 175 KG 176
+G
Sbjct: 249 QG 250
>gi|297527395|ref|YP_003669419.1| 30S ribosomal protein S4E, central domain-containing protein
[Staphylothermus hellenicus DSM 12710]
gi|297256311|gb|ADI32520.1| Ribosomal protein S4E, central domain protein [Staphylothermus
hellenicus DSM 12710]
Length = 252
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 14/184 (7%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
H VD ++R + YP G MDV+ I T + +R++ L I EEAK+KL ++ +
Sbjct: 70 HFKVDGRIRKNYKYPVGLMDVIEIVDTGQTYRVIPVPVKVLGLIEIDKEEAKYKLSRIEN 129
Query: 64 VQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLETNKITEFIKFDVGNV 115
+ G +N +DGR I+ DP + K T+++ + +I +I + G +
Sbjct: 130 KTTVKGGHIQLNLHDGRNVLIKVGDPKNPVEDIYKTLGTLQITIPEQQILNYIPLEEGML 189
Query: 116 VMVTGGRNRGRVGIIKNREKHKG---SFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 172
V+++GGRN GRVG K HKG + I+D G++F T L VF IGK +P +
Sbjct: 190 VIISGGRNVGRVG--KVVSIHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPIGK-EEPLIK 246
Query: 173 LPKG 176
LP+G
Sbjct: 247 LPEG 250
>gi|432329001|ref|YP_007247145.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
gi|432135710|gb|AGB04979.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
Length = 236
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R + VD +V TD +P GFMDV++I ++N+R +YD G R+ I + A++KL ++
Sbjct: 63 SRKIKVDGRVVTDIKFPIGFMDVITIDDMDKNYRAVYDIYGNLRIVEIPKDNAEWKLVRI 122
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G +N +DGR I + D +K+ + T +I G+V ++ GG
Sbjct: 123 EDKHIVPGGKIQLNLHDGRNILLDENKYHTKDVLKIKVPTQEIIAHYPMAEGSVAIIIGG 182
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
++RGRV IK +G + + ++ G E +R NVF IG G KP +++P+
Sbjct: 183 KHRGRVAHIKEYVVVRGPQDNM-VKFEEGFEVNSR--NVFVIGVG-KPEITIPE 232
>gi|212223224|ref|YP_002306460.1| 30S ribosomal protein S4e [Thermococcus onnurineus NA1]
gi|212008181|gb|ACJ15563.1| SSU ribosomal protein S4E [Thermococcus onnurineus NA1]
Length = 243
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA K ++ +
Sbjct: 71 ILVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPITEKEANIKPLRISNK 130
Query: 65 QFGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ + +N +DG D + A T+ + + +I E I F+VG V VT
Sbjct: 131 RMVKGAKVQLNLHDGSNHLVAFSEKDRFMTAY-TVLMKVPEREIIEVIPFEVGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G +++ R+ G + + I+D G F T F +GK KP +SLP
Sbjct: 190 GKNVARKGKVVEVRQFPMGWPDVVTIEDENGELFDTLKEYAFVVGK-DKPEISLP 243
>gi|432102968|gb|ELK30365.1| 40S ribosomal protein S4 [Myotis davidii]
Length = 301
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 27 IPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 86
I KT ENFRL+YDTKG F +H R EEAK+KLCKVR + G KGIP++ T+D RTI YPD
Sbjct: 70 IDKTGENFRLVYDTKGCFAVHR-RPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTICYPD 128
Query: 87 PLIKANDTIKLDLETNK 103
PLIK + + E+ K
Sbjct: 129 PLIKLSQKLPEKWESVK 145
>gi|390460190|ref|XP_003732439.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
1-like [Callithrix jacchus]
Length = 231
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 47/202 (23%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+Q + D +VR D T+P+GF+DV+ + +T E+FRL +DT R H
Sbjct: 54 VQHFIRTDGQVRVDGTHPSGFLDVIRMEQTGEHFRLAHDTNSRLASH------------- 100
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ GR + AN T+++ + T +KF+ G +VT
Sbjct: 101 --------------RRHGGRLL--------ANGTVQVQGRAREST--MKFNTGTGCVVT- 135
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
+I NRE+ GS +H++ G+ FAT L ++F G G PW+SL K I+
Sbjct: 136 ------ACVISNRERQAGSSRVVHLKGDGGNSFATSLSSIFVTGNGNTPWISLCGAKAIQ 189
Query: 181 LSIIEEAR---KRQALATSAAA 199
L +++ R KR + +T+ A+
Sbjct: 190 LILLKXERLTTKRSSGSTAVAS 211
>gi|353238128|emb|CCA70083.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
DSM 11827]
Length = 74
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 53/67 (79%)
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSII 184
GRVG I +RE+H G F+ +H++D L FATR+ N+F IG+GTKPW+SLPKGKG+KL+I
Sbjct: 2 GRVGTITHRERHIGGFDIVHVKDVLDRTFATRVTNIFVIGEGTKPWISLPKGKGVKLTIS 61
Query: 185 EEARKRQ 191
EE +R+
Sbjct: 62 EERDQRR 68
>gi|389853105|ref|YP_006355339.1| 30S ribosomal protein S4e [Pyrococcus sp. ST04]
gi|388250411|gb|AFK23264.1| RPS4, small subunit ribosomal protein S4e [Pyrococcus sp. ST04]
Length = 243
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 6 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQ 65
LVD KVR D +P G MDVVSIP+T E++R+L ++ G+ LH I +EEA K ++R+ +
Sbjct: 72 LVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLPNSIGKLILHPISEEEANIKPLRIRNKR 131
Query: 66 FGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETNKITEFIKFDVGNVVMVTG 120
+ +N +DG + PL + ++ T+ + + +I E + F+ G V VT
Sbjct: 132 MVKGAKIQLNFHDGTN--HLIPLSEKDNYFTSYTVLMKVPDREILEVLPFEKGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G I+ + G + + I+D G F T F +G+ KP +SLP
Sbjct: 190 GKNVARKGRIVDIKRFPMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPKISLP 243
>gi|14520545|ref|NP_126020.1| 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
gi|17369748|sp|Q9V1U8.1|RS4E_PYRAB RecName: Full=30S ribosomal protein S4e
gi|5457761|emb|CAB49251.1| rps4E SSU ribosomal protein S4E [Pyrococcus abyssi GE5]
gi|380741072|tpe|CCE69706.1| TPA: 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
Length = 243
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 9/175 (5%)
Query: 6 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQ 65
LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA K ++R+ +
Sbjct: 72 LVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKR 131
Query: 66 FGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETNKITEFIKFDVGNVVMVTG 120
+ +N +DG + PL + ++ T+ + + +I E + F+ G V VT
Sbjct: 132 MVKGAKIQLNFHDGTN--HLIPLSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVTQ 189
Query: 121 GRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G I++ ++ G + + I+D G F T F +G+ KP +SLP
Sbjct: 190 GKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPRISLP 243
>gi|307595641|ref|YP_003901958.1| 30S ribosomal protein S4 [Vulcanisaeta distributa DSM 14429]
gi|307550842|gb|ADN50907.1| Ribosomal protein S4E, central domain protein [Vulcanisaeta
distributa DSM 14429]
Length = 247
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 13/175 (7%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
VD KVR D YP G MDVV I TNE +R++ I EEA++KLC++ +
Sbjct: 69 VDGKVRRDYKYPVGLMDVVEIVPTNEVYRMVPHPTKFLWPVLISQEEARYKLCRIENKTM 128
Query: 67 GQKGIPYINTYDGRTIRYP-------DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
+ G +N +DGR I+ P D L D++ +D+ NKI +++K ++G++ ++
Sbjct: 129 VKGGQIQLNLHDGRNIQLPYEEGSKYDTL----DSVLIDIAENKIVDYVKLELGSLGLIV 184
Query: 120 GGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G+N G G I + + ++ T+ I G E T + +F +GK KP +++
Sbjct: 185 DGKNVGYYGKITEIVQTYRKRESTVKIITNEGKEVRTIVDYLFAVGK-EKPLITI 238
>gi|410670339|ref|YP_006922710.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
gi|409169467|gb|AFV23342.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
Length = 236
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +R D +P G +DV+S+P N +R+L D KGR LH I+ E KLC++
Sbjct: 66 VLVDGVIRKDLRFPVGLLDVISMPVENVAYRVLLDGKGRLELHKIK-ESTDNKLCRINGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G+ +N DG I + D+I L L K+ + IK+ GN+ ++ GG++
Sbjct: 125 TVLKGGVIQLNLNDGSNIIGSNDY-NTKDSIILSLPDKKVVQHIKYQAGNLALIVGGKHT 183
Query: 125 GRVGIIK 131
G +G IK
Sbjct: 184 GSIGTIK 190
>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
Length = 273
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
Query: 96 KLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKH--KGSFETIHI 145
++DLETNKI +FIKFDVGNVVM+TGGRN GRVG IKNREKH KGSFETIH+
Sbjct: 214 EIDLETNKIMDFIKFDVGNVVMMTGGRNTGRVGAIKNREKHKGKGSFETIHV 265
>gi|296242597|ref|YP_003650084.1| 30S ribosomal protein S4 [Thermosphaera aggregans DSM 11486]
gi|296095181|gb|ADG91132.1| SSU ribosomal protein S4E [Thermosphaera aggregans DSM 11486]
Length = 252
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
+D KVR D +P G MDV+ + TNE +R++ L I EEA FKL ++
Sbjct: 73 IDGKVRRDYKFPVGMMDVIEVVGTNEYYRVVPVPTKVLDLVKIAKEEASFKLVRIEDKTT 132
Query: 67 GQKGIPYINTYDGRTI--RYPDPLIKAND------TIKLDLETNKITEFIKFDVGNVVMV 118
+ G +N +DGR I R DP D T+++ L +I +I+ G + ++
Sbjct: 133 VKNGHIQLNLHDGRNILVRVSDPRNPVEDVYETLGTLQIALPGQEILNYIQLKEGVIAII 192
Query: 119 TGGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
+GGRN GRVG I+ + + I+D G + T L +F IG KP ++LP+G
Sbjct: 193 SGGRNVGRVGRIVSIHRGMRRHRSIVTIEDKNGVKVQTSLDYIFPIGV-EKPLITLPEG 250
>gi|325967619|ref|YP_004243811.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28]
gi|323706822|gb|ADY00309.1| 30S ribosomal protein S4E, central domain-containing protein
[Vulcanisaeta moutnovskia 768-28]
Length = 248
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 5/171 (2%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
VD K+R D YP G MDV+ I TNE +RL+ I EEA++KLC++ +
Sbjct: 69 VDGKIRRDYKYPVGLMDVIEIIPTNETYRLVPHPTKFLWPVPISQEEARYKLCRIENKTM 128
Query: 67 GQKGIPYINTYDGRTIRYP---DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +N +DG+ ++ P + D++ +D+ NKI + +K ++G++ ++ G+N
Sbjct: 129 VKGGQIQLNLHDGKNLQLPYEEGSKYETLDSVLIDISGNKILDHVKLELGSLGLIVDGKN 188
Query: 124 RGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G G II+ + ++ T I + G E T + +F +GK KP V++
Sbjct: 189 VGYYGKIIEIIQTYRKRGSTAKIMTSDGKEVRTIIDYLFAVGK-EKPLVTI 238
>gi|310771952|emb|CBH28913.1| 40S RIBOSOMAL PROTEIN S4 [Anncaliia algerae]
Length = 171
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 68/100 (68%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LV+ VRTD TYP G MDV++I TNE++R++YD +F LH I EE+ K+CKV
Sbjct: 70 ILVNGVVRTDTTYPLGIMDVLTIQSTNEHYRVMYDVFKKFVLHKIDAEESNIKVCKVIKK 129
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKI 104
+ +K +PYI T DG + RY DP IK ND++ +D++ K+
Sbjct: 130 KICKKNVPYIYTADGYSFRYCDPKIKTNDSLIVDIKEMKV 169
>gi|332158011|ref|YP_004423290.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
gi|331033474|gb|AEC51286.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
Length = 243
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 6 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQ 65
LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I +EEA K ++R+ +
Sbjct: 72 LVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKR 131
Query: 66 FGQKGIPYINTYDGRTIRYPDPLIKAND------TIKLDLETNKITEFIKFDVGNVVMVT 119
+ +N +DG P D T+ + + +I E + F+ G V VT
Sbjct: 132 MVKGAKVQLNFHDGTNHLVP---FSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVT 188
Query: 120 GGRNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
G+N R G I++ ++ G + + I+D G F T F +G+ KP +SLP
Sbjct: 189 QGKNVARKGRIVEIKKFPMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPKISLP 243
>gi|150401818|ref|YP_001325584.1| 30S ribosomal protein S4 [Methanococcus aeolicus Nankai-3]
gi|189045351|sp|A6UWV0.1|RS4E_META3 RecName: Full=30S ribosomal protein S4e
gi|150014521|gb|ABR56972.1| Ribosomal protein S4E, central [Methanococcus aeolicus Nankai-3]
Length = 244
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD R D YP G MDV+S+P NE+F ++ D KGR +L+ I+D KLCK+ +
Sbjct: 71 VLVDGVKRKDHRYPTGLMDVISLPDANESFLVVLDEKGRIKLNKIKDNTK--KLCKIENK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR + + + K D + L + I ++F G +
Sbjct: 129 TVIKGGHIQLNLHDGRNQIVKLADATKAEEDIYKTGDCVILSIPEQSIVGHVQFGEGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+TGG++ G I EK + + I ++ G +F T VF +G KP +S+
Sbjct: 189 YITGGKHVGDFAKIIGIEKKQLYPDIITLETENGEQFKTIRDYVFIVGD-DKPVISM 244
>gi|336121758|ref|YP_004576533.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
gi|334856279|gb|AEH06755.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
Length = 247
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD R + YPAG MDV+SIP TNENF +L D KGR L + ++ KLCK+++
Sbjct: 71 ILVDGVKRKEHRYPAGLMDVISIPDTNENFLVLLDEKGRITLK--KTDKNDVKLCKIKNK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR + + + K D + + + +I ++F G +
Sbjct: 129 TVIKGGHIQLNLHDGRNQIVKVSDATKAEEDIYKTGDCVLISIPEQEIVGHVQFGEGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+TGG++ G I EK K + I ++ G +F T VF +G
Sbjct: 189 YITGGKHAGDFAKIIEIEKRKLYPDIITLETKDGEQFKTIKDYVFVVG 236
>gi|11499497|ref|NP_070738.1| 30S ribosomal protein S4e [Archaeoglobus fulgidus DSM 4304]
gi|3914913|sp|O28366.1|RS4E_ARCFU RecName: Full=30S ribosomal protein S4e
gi|2648630|gb|AAB89340.1| SSU ribosomal protein S4E (rps4E) [Archaeoglobus fulgidus DSM 4304]
Length = 235
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+LVD VR D +P G DVV+IPK +++R+L+D KGR+ + E+A KL K+ +
Sbjct: 65 EILVDGVVRKDYKFPVGLFDVVTIPKLEKSYRILFDEKGRYIPKEV--EDADLKLYKITN 122
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G +N +DG I + K D+I L + ++ + +KF+ G +VM+TGG +
Sbjct: 123 KTLVRGGKVQLNLFDGTNILGSNDY-KTKDSILLRIPEKEVVDHLKFEEGALVMITGGTH 181
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK--GTKPWVSL 173
G +G IK+ + + S + + + T VF +GK KP + L
Sbjct: 182 AGEIGRIKSYKIVRSSAPNLVTVEGEERDITTIEDYVFVVGKKDSDKPVIDL 233
>gi|242052941|ref|XP_002455616.1| hypothetical protein SORBIDRAFT_03g014423 [Sorghum bicolor]
gi|241927591|gb|EES00736.1| hypothetical protein SORBIDRAFT_03g014423 [Sorghum bicolor]
Length = 67
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 43/50 (86%)
Query: 148 ALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRQALATSA 197
LGH FATR+GNVFTIGKG KPWVSLPKGKGIKLSIIEE RKR A A +A
Sbjct: 18 GLGHAFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQTA 67
>gi|91694809|gb|ABE41835.1| ribosomal protein S4 [Marmota monax]
Length = 120
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 55
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|395644928|ref|ZP_10432788.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
gi|395441668|gb|EJG06425.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
Length = 240
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V+++ K TD G D++SIPK +++R+L D KGR I E AK +LCK+
Sbjct: 62 QRQVILNGKPVTDPKLGLGIFDIISIPKIGKHYRVLTDKKGRMVTIEIDAEAAKTRLCKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK---ITEFIKFDVGNVVMV 118
R+ + G +N G + D D+I + LE I + F +GN+ MV
Sbjct: 122 RNKSIVRGGKVQLNLLYGANL-LADNTYHPKDSIVVTLEGENRFAIVDHFPFAIGNMAMV 180
Query: 119 TGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGT 167
GG++ G+VG I GS + +QD G F T VF IG+ T
Sbjct: 181 IGGKHSGKVGRISEIRVAAGSIPNRVILQDKDGETFETVEQYVFMIGRET 230
>gi|298674790|ref|YP_003726540.1| 30S ribosomal protein S4e [Methanohalobium evestigatum Z-7303]
gi|298287778|gb|ADI73744.1| Ribosomal protein S4E, central domain protein [Methanohalobium
evestigatum Z-7303]
Length = 240
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 5/173 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VLVD K R D +P G D+++IP+ NE++RLL + K + L + + + KLCK+
Sbjct: 63 QGKVLVDGKPRKDLKFPVGLFDIITIPEMNESYRLLINQKSKLILQKLEESDTN-KLCKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G +N DG + + KA D+I + + I +++ GN+ M+ GG
Sbjct: 122 NDKTTVKSGAIQLNLSDGTNLIGSNDY-KAKDSIIITVPDKNIVNHLEYKEGNLAMIVGG 180
Query: 122 RNRGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
++ G +G IK K +GS T+ I ++F T V IG+ KP ++L
Sbjct: 181 KHTGEIGTIKTITKTRGSEANTVEIS-GQNYDFETIEDYVVVIGE-DKPEINL 231
>gi|297619576|ref|YP_003707681.1| 30S ribosomal protein S4E [Methanococcus voltae A3]
gi|297378553|gb|ADI36708.1| Ribosomal protein S4E, central domain protein [Methanococcus voltae
A3]
Length = 244
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L+D K R + P G MD++S+P NEN+ +L+D GR L + EEA KLCK+ +
Sbjct: 71 ILIDGKKRKEYKLPVGLMDLISVPLINENYVVLFDESGRLTLKKV--EEAGVKLCKIVNK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR + + + K D+I L + KI ++F +
Sbjct: 129 TVIKGGHIQLNLHDGRNQIITVADATKAEEDVYKTGDSILLSIPEQKIAGHVQFGENKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
VTGG++ G I E+ K + I ++ G +F T VF +G +P ++L
Sbjct: 189 YVTGGKHVGEFAKIIEIEERKLYADIITLETKDGEQFKTVKDYVFIVGD-NEPVINL 244
>gi|402582302|gb|EJW76248.1| 40S ribosomal protein S4, partial [Wuchereria bancrofti]
Length = 135
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 47/69 (68%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD +PAGFMDV+ I KTNE FRLLYD KGR+ H I ++E KLCK+
Sbjct: 67 QRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKI 126
Query: 62 RSVQFGQKG 70
G KG
Sbjct: 127 VRKCVGPKG 135
>gi|221039598|dbj|BAH11562.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 44/55 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 55
MQR + +D KVRTD TYPAG MDV+SI KT ENFRL+YDTKGRF +H I EEAK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGLMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|268325727|emb|CBH39315.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V+V+ KVR + +P G DV+S+PK ++ +L D KG+ L I +E A +KLC+V
Sbjct: 64 NVVVNGKVRKEHKFPIGIFDVLSVPKLKAHYMVLLDKKGKLSLIEIDEEAAFWKLCRVDG 123
Query: 64 VQFGQKGIPYINTYDGRTIRYP---DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ G +N +DGR I P + IK +D++ + + N+I + ++ GN +V G
Sbjct: 124 RTMIKAGKRQLNLHDGRNI-LPGERNEAIKTHDSLMISVPDNEILQHFAYEAGNKAVVIG 182
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
G++ G I+ K K S + F T VF +GK
Sbjct: 183 GKHSAETGEIEEIRKTKSSDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|330835813|ref|YP_004410541.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
gi|329567952|gb|AEB96057.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
Length = 241
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +VR D YP G MDV+SIP ++R++ D + I +EEAKFKL ++
Sbjct: 65 VLVDGRVRRDYKYPVGLMDVISIPHAGLHYRIVPDKARLLKPIKISEEEAKFKLVRLTGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPD-----PLIKANDTIKLDLETNKITEFIKFDVGNVVMVT 119
+ G+ ++ DGR I + I T+K+ + I + G VM
Sbjct: 125 SIIKGGLYQLHLEDGRNILLGNENSELSKIPTLSTLKVSIPVQSILSVYQMREGAQVMAI 184
Query: 120 GGRNRGRVGIIKNRE--KHKG-SFETIHIQDALGHEFATRLGNVFTIGK 165
GG+N G +G +K + +K + + I++ G E+ T L N IG+
Sbjct: 185 GGKNAGAIGQVKKIQIAPYKAKKYSIVIIRNPSGAEYETNLANAMVIGE 233
>gi|414587464|tpg|DAA38035.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
mays]
Length = 171
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 64/145 (44%), Gaps = 63/145 (43%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+QRHVLVD K+ S P + T G FRLH IRDE+AKFKLC
Sbjct: 70 LQRHVLVDGKM--------------SFPPLRQT-----RTTGCFRLHPIRDEDAKFKLCN 110
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
RS+Q FDV NVVMVTG
Sbjct: 111 GRSIQ--------------------------------------------FDVDNVVMVTG 126
Query: 121 GRNRGRVGIIKNREKHKGSFETIHI 145
GRN GRVG+IKN EKHKG FE I +
Sbjct: 127 GRNTGRVGVIKNWEKHKGIFEVIDV 151
>gi|227827703|ref|YP_002829483.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.14.25]
gi|227830399|ref|YP_002832179.1| 30S ribosomal protein S4e [Sulfolobus islandicus L.S.2.15]
gi|229579218|ref|YP_002837616.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.G.57.14]
gi|229582030|ref|YP_002840429.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.N.15.51]
gi|229584907|ref|YP_002843409.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.27]
gi|238619874|ref|YP_002914700.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.4]
gi|284997906|ref|YP_003419673.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|385773375|ref|YP_005645941.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
gi|385776013|ref|YP_005648581.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|259495262|sp|C3N5T9.1|RS4E_SULIA RecName: Full=30S ribosomal protein S4e
gi|259495263|sp|C4KHG8.1|RS4E_SULIK RecName: Full=30S ribosomal protein S4e
gi|259495264|sp|C3MQ71.1|RS4E_SULIL RecName: Full=30S ribosomal protein S4e
gi|259495265|sp|C3MVJ0.1|RS4E_SULIM RecName: Full=30S ribosomal protein S4e
gi|259495266|sp|C3NH97.1|RS4E_SULIN RecName: Full=30S ribosomal protein S4e
gi|259495267|sp|C3NEF5.1|RS4E_SULIY RecName: Full=30S ribosomal protein S4e
gi|227456847|gb|ACP35534.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus L.S.2.15]
gi|227459499|gb|ACP38185.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.14.25]
gi|228009932|gb|ACP45694.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.G.57.14]
gi|228012746|gb|ACP48507.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus Y.N.15.51]
gi|228019957|gb|ACP55364.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.27]
gi|238380944|gb|ACR42032.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus M.16.4]
gi|284445801|gb|ADB87303.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
gi|323474761|gb|ADX85367.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus REY15A]
gi|323477489|gb|ADX82727.1| Ribosomal protein S4E, central domain protein [Sulfolobus
islandicus HVE10/4]
Length = 239
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD KVR D YP G MD+VSIP + FR++ D RL I +EA +K ++ +
Sbjct: 65 VLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKAND---TIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G +N DGR I K+ T+K++L + I + G+ + GG
Sbjct: 125 TTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGG 184
Query: 122 RNRGRVGIIKNREKHK---GSFETIHIQDALGHEFATRLGNVFTIGK 165
+N G G++KN K + I ++ G+ + T L NV +IG+
Sbjct: 185 KNVGIHGVVKNINLSKFKSRKYSVITLESKDGNTYQTNLMNVMSIGR 231
>gi|18978184|ref|NP_579541.1| 30S ribosomal protein S4 [Pyrococcus furiosus DSM 3638]
gi|397652540|ref|YP_006493121.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
gi|22096123|sp|Q8U011.1|RS4E_PYRFU RecName: Full=30S ribosomal protein S4e
gi|428697934|pdb|3J20|E Chain E, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18893993|gb|AAL81936.1| SSU ribosomal protein S4E [Pyrococcus furiosus DSM 3638]
gi|393190131|gb|AFN04829.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
Length = 243
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 6 LVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQ 65
LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA K ++R+ +
Sbjct: 72 LVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEDEAFIKPLRIRNKR 131
Query: 66 FGQKGIPYINTYDGR----TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ +N +DG +I D + T+ + + +I E + F+ G V VT G
Sbjct: 132 MIKGARVQLNFHDGTNHIVSIAEKDNYFTSY-TVLMKVPEREILEVLPFEKGAYVFVTQG 190
Query: 122 RNRGRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
+N R G I++ + G + + I+D G F T F +G KP +SLP
Sbjct: 191 KNVARKGRIVEIKRFPMGWPDVVTIEDEEGELFDTLKEYAFVVGT-DKPKISLP 243
>gi|147919321|ref|YP_686943.1| 30S ribosomal protein S4e [Methanocella arvoryzae MRE50]
gi|121690304|sp|Q0W1X6.1|RS4E_UNCMA RecName: Full=30S ribosomal protein S4e
gi|110622339|emb|CAJ37617.1| 30S ribosomal protein S4E [Methanocella arvoryzae MRE50]
Length = 234
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD KVR D Y G D +SIP N N+R++ G+F L + D A K+CK+ +
Sbjct: 67 VLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKFHLVPVTDASA--KICKIVNK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N +DG T+ + K D++ L + KI + + VG++VMVT G++
Sbjct: 125 TALRGGKIQLNLHDGTTMIASNDY-KTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHS 183
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G +G +K + + S + +F T VF IGK + P +G+K
Sbjct: 184 GEIGKVKEIKVVRSSAPNTVVITTPEGDFETIEQYVFVIGKDS------PAVQGVK 233
>gi|355733706|gb|AES11115.1| ribosomal protein S4, Y-linked 2 [Mustela putorius furo]
Length = 69
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 19 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYD 78
AGFM V+S+ K ENF +YDTK RF LH I EAK+KL KVR + G KGIP++ T++
Sbjct: 1 AGFMAVISMDKPGENFLPIYDTKRRFALHRI-TLEAKYKLYKVRKIFVGTKGIPHLVTHE 59
Query: 79 GRTIRYPDPL 88
RTIRYPDPL
Sbjct: 60 VRTIRYPDPL 69
>gi|413950057|gb|AFW82706.1| hypothetical protein ZEAMMB73_177941 [Zea mays]
Length = 395
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 62/141 (43%), Gaps = 63/141 (44%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
+QRH+LVD G M S+ +T T FRLH IRDE+AKFKLC
Sbjct: 298 LQRHILVD-----------GMMSFPSLRQTR--------TTSCFRLHPIRDEDAKFKLCN 338
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
RSVQ FDV NVVMV G
Sbjct: 339 GRSVQ--------------------------------------------FDVDNVVMVAG 354
Query: 121 GRNRGRVGIIKNREKHKGSFE 141
GRN GRVG+IKNREKHKG FE
Sbjct: 355 GRNIGRVGVIKNREKHKGIFE 375
>gi|170291174|ref|YP_001737990.1| 30S ribosomal protein S4e [Candidatus Korarchaeum cryptofilum OPF8]
gi|259495261|sp|B1L778.1|RS4E_KORCO RecName: Full=30S ribosomal protein S4e
gi|170175254|gb|ACB08307.1| Ribosomal protein S4E [Candidatus Korarchaeum cryptofilum OPF8]
Length = 235
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+ +LVD K R D + G MDV+SIP+ N+R++ D RL I E+K KL KV
Sbjct: 68 MKKILVDGKPRYDYKFQVGLMDVISIPEIGVNYRMVPDPHRFLRLIEIPQSESKMKLVKV 127
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ + G + ++DGR +K D++ ++L + + + ++FD G+ V+VT G
Sbjct: 128 IGKRTIRGGRIQLTSHDGRNFLLDGRDVKPGDSLLIELPSQSVIDHLRFDTGSSVLVTRG 187
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR--LGNVFTIGK 165
R GR+G + +G I ++D E + R N+ +GK
Sbjct: 188 RMAGRIG------RVEGIGTIIEMRDLENPELSYRGVKENLIVVGK 227
>gi|20089954|ref|NP_616029.1| 30S ribosomal protein S4 [Methanosarcina acetivorans C2A]
gi|22096115|sp|Q8TRT5.1|RS4E_METAC RecName: Full=30S ribosomal protein S4e
gi|19914915|gb|AAM04509.1| ribosomal protein S4e [Methanosarcina acetivorans C2A]
Length = 235
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD R D +P G DV+++P NE +R+L D KGR LH + + KLC++ +
Sbjct: 65 VLVDGIPRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLTLHKLNETNVN-KLCRINNK 123
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N DG I + D++ L + ++ + +KF+VGN+ MV GG++
Sbjct: 124 TTVKGGKFQLNLNDGTNIIGSNEY-GTKDSLILSIPDKQVVKHLKFEVGNLAMVVGGQHS 182
Query: 125 GRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G G I++ RE T+ I +F T V IG+ KP + L
Sbjct: 183 GETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|150399473|ref|YP_001323240.1| 30S ribosomal protein S4e [Methanococcus vannielii SB]
gi|133944|sp|P14023.1|RS4E_METVA RecName: Full=30S ribosomal protein S4e
gi|189045356|sp|A6UQ56.1|RS4E_METVS RecName: Full=30S ribosomal protein S4e
gi|44760|emb|CAA34692.1| unnamed protein product [Methanococcus vannielii]
gi|150012176|gb|ABR54628.1| Ribosomal protein S4E, central [Methanococcus vannielii SB]
Length = 244
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L+D R + +P G MDV+SIP+ NEN+ +L+D GR L + E+ KLCK+ +
Sbjct: 71 ILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLK--KTEKTGVKLCKIVNK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR ++ + + K D++ + L + ++F+ G +
Sbjct: 129 TVIKGGHIQLNLHDGRNQIVKVANALKAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+TGG++ G + EK + + +++ G +F T VF +G+ +P +S+
Sbjct: 189 YITGGKHVGEFAKVVEVEKRTLYSDIVTLENKDGEKFKTIKPYVFIVGQ-DEPVISM 244
>gi|390986591|gb|AFM35815.1| hypothetical protein, partial [Oryza eichingeri]
Length = 77
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYD 39
MQRHV+VD KVRTDKTYPAGFMDVVSIPKT ENFRLLYD
Sbjct: 39 MQRHVMVDGKVRTDKTYPAGFMDVVSIPKTGENFRLLYD 77
>gi|20094656|ref|NP_614503.1| 30S ribosomal protein S4 [Methanopyrus kandleri AV19]
gi|22654091|sp|Q8TW18.1|RS4E_METKA RecName: Full=30S ribosomal protein S4e
gi|19887817|gb|AAM02433.1| Ribosomal protein S4E [Methanopyrus kandleri AV19]
Length = 260
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 15/176 (8%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+ VD VR + +P G MDVV IP+T + +R++ + R + I +EEA+ K+C++++
Sbjct: 74 IYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNK 133
Query: 65 QFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDL------ETNKITEFIKF 110
+ + G I +DG+ + DP + D++ L+L E+ K+ + I F
Sbjct: 134 TYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPF 193
Query: 111 DVGNVVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGK 165
+ G V GR+ G VG + + +G E I +++ G +F T G + IGK
Sbjct: 194 EEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK 249
>gi|268323249|emb|CBH36837.1| 30S ribosomal protein S4e [uncultured archaeon]
Length = 235
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V+V+ KVR + +P G DV+S+PK ++ +L D KG+ L I +E A KLC+V
Sbjct: 64 NVVVNGKVRKEHKFPIGIFDVLSVPKLKAHYMVLLDKKGKLSLIEIDEEVASRKLCRVDG 123
Query: 64 VQFGQKGIPYINTYDGRTIRYP---DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
++G +N +DGR I P IK +D++ + + N+I + ++ GN +V G
Sbjct: 124 RTMIKEGKRQLNLHDGRNI-LPGERSEEIKTHDSLMISVPDNEILQHFAYEAGNKAVVIG 182
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
G++ G I+ K + S + F T VF +GK
Sbjct: 183 GKHSAETGEIEEIRKTESSDPNVVRIKQDERSFETIEDYVFVVGK 227
>gi|15897612|ref|NP_342217.1| 30S ribosomal protein S4 [Sulfolobus solfataricus P2]
gi|284174936|ref|ZP_06388905.1| 30S ribosomal protein S4e [Sulfolobus solfataricus 98/2]
gi|384434225|ref|YP_005643583.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
gi|11134765|sp|Q9UX94.1|RS4E_SULSO RecName: Full=30S ribosomal protein S4e
gi|6015771|emb|CAB57598.1| ribosomal protein S4E [Sulfolobus solfataricus P2]
gi|13813875|gb|AAK41007.1| SSU ribosomal protein S4E (rps4E) [Sulfolobus solfataricus P2]
gi|261602379|gb|ACX91982.1| Ribosomal protein S4E, central domain protein [Sulfolobus
solfataricus 98/2]
Length = 239
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD KVR D YP G MD+VSIP + FR+L D R I +EA++K ++ +
Sbjct: 65 VLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVLPDNVRFMRFSKISADEARYKYVRIINK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
++G +N DGR I K T+K++L + +I + + + GG
Sbjct: 125 TTIKEGRIQLNLEDGRNILVDKETAKNFKTLMTLKIELPSQQILDSFTISERSYAIFVGG 184
Query: 122 RNRGRVGIIKNREKHK---GSFETIHIQDALGHEFATRLGNVFTIGK 165
RN G GI+KN K + I ++ G+ + T + NV +IG+
Sbjct: 185 RNVGIHGIVKNINLSKFKSRKYSVITLESRDGNTYQTNIMNVMSIGR 231
>gi|73667650|ref|YP_303665.1| 30S ribosomal protein S4 [Methanosarcina barkeri str. Fusaro]
gi|121725704|sp|Q46GA7.1|RS4E_METBF RecName: Full=30S ribosomal protein S4e
gi|72394812|gb|AAZ69085.1| SSU ribosomal protein S4E [Methanosarcina barkeri str. Fusaro]
Length = 235
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD R D +P G DV+++P NE +R+ D KGR LH + KLC++ +
Sbjct: 65 VLVDGIPRKDLRFPVGLFDVITLPLVNETYRMFQDEKGRLALHKLNATNVN-KLCRINNK 123
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N DG I + D++ L L +I + ++F VGN+ MV GG++
Sbjct: 124 TTLKGGKVQLNLNDGTNILGSNEY-STKDSLILSLPDKQIVKHLQFKVGNLAMVVGGQHS 182
Query: 125 GRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G +G I + RE T+ I +F T V IG+ KP + L
Sbjct: 183 GEIGKITEIREVKSSRHNTVAISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|116755004|ref|YP_844122.1| 30S ribosomal protein S4e [Methanosaeta thermophila PT]
gi|116666455|gb|ABK15482.1| SSU ribosomal protein S4E [Methanosaeta thermophila PT]
Length = 233
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD VR D +P G DV+++P N+ +R++ TKG F L I+ + + KL +V +
Sbjct: 64 VLVDGTVRRDARFPVGLFDVITVPALNKQYRMVKSTKGYFVLIEIQPDTPR-KLVRVENK 122
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ +N DG I + + D++ + L I + IKF+VGN+ MVTGG +
Sbjct: 123 TTLKGNRMQLNLSDGSNI-IAEGDVGTGDSLLISLPERSIEDIIKFEVGNLAMVTGGSHT 181
Query: 125 GRVGIIKNREKHKGSFE---TIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
G G IK+ + + S TI D + T + VF IG+ P + L G
Sbjct: 182 GMTGRIKSVQIVRSSMPNRVTISTDDG---DIETIIDYVFVIGRDA-PVIELEAG 232
>gi|195552762|ref|XP_002076537.1| GD17639 [Drosophila simulans]
gi|194202148|gb|EDX15724.1| GD17639 [Drosophila simulans]
Length = 145
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 55
MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
>gi|315427720|dbj|BAJ49316.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q +VD +V D +P G MDV+SIP+ EN+R+L L EEA FK+C+V
Sbjct: 60 QGKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQV 119
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPL------IKANDTIKLDLETNKITEFIKFDVGNV 115
+ G I +DGRTI + + IK DT+K+ + + +I E I D G
Sbjct: 120 VRKNHVRGGALMIGLHDGRTILFRGEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVY 179
Query: 116 VMVTGGRNRGRVGIIK--NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+ G G G I RE T ++ G T L N+ +G G PW++L
Sbjct: 180 AYIHSGARAGLHGKIMRIRREVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237
>gi|315425862|dbj|BAJ47515.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
gi|343484677|dbj|BAJ50331.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
subterraneum]
Length = 238
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q +VD +V D +P G MDV+SIP+ EN+R+L L EEA FK+C+V
Sbjct: 60 QGKFMVDGRVVKDPRFPLGLMDVLSIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQV 119
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPL------IKANDTIKLDLETNKITEFIKFDVGNV 115
+ G I +DGRTI + + IK DT+K+ + + +I E I D G
Sbjct: 120 VRKNHVRGGALMIGLHDGRTILFRGEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVY 179
Query: 116 VMVTGGRNRGRVGIIK--NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+ G G G I RE T ++ G T L N+ +G G PW++L
Sbjct: 180 AYIHSGARAGLHGKIMRIRREVVFPDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237
>gi|161751098|ref|NP_376299.2| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
gi|54039526|sp|Q975J2.2|RS4E_SULTO RecName: Full=30S ribosomal protein S4e
gi|342306184|dbj|BAK54273.1| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
Length = 243
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
++VD +VR D +P G MDV+SIP ++ FR++ D I E+AK+K ++ +
Sbjct: 65 IMVDGRVRKDYKFPVGLMDVISIPSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIVNK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLETNKITEFIKFDVGNVVMVT 119
+ G +N DGR I P + + T+K+++ + I + + G ++
Sbjct: 125 TTNKNGNIQLNLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAIII 184
Query: 120 GGRNRGRVGIIKN---REKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
GGRN G G+IK + K + + I+ G T L NV IG
Sbjct: 185 GGRNVGLHGVIKTIQYAKYKKRKYSIVTIEQKNGESVQTNLQNVMVIG 232
>gi|91772095|ref|YP_564787.1| 30S ribosomal protein S4e [Methanococcoides burtonii DSM 6242]
gi|91711110|gb|ABE51037.1| SSU ribosomal protein S4E [Methanococcoides burtonii DSM 6242]
Length = 236
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+VLVD R D +P G MD+++IP N +R++ D K R L+ + D KLC++
Sbjct: 65 NVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKL-DGTGADKLCRIEG 123
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
++G + DG I + D+I L + K+ + IK++VGN+ M+ GG +
Sbjct: 124 KTSIKEGKIQMRLNDGVNIIGSNNY-NTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSH 182
Query: 124 RGRVGIIKNREKHKGS-FETIHIQDALGHEFATRLGNVFTIGKGTKP 169
G VG IK K S T+ I + EF T VF IG+ +KP
Sbjct: 183 AGEVGSIKEINTVKSSKNNTVTISGEI--EFETIEDYVFVIGE-SKP 226
>gi|161899455|ref|XP_001712961.1| ribosomal protein S4 [Bigelowiella natans]
gi|2500490|sp|Q40941.1|RS4_BIGNA RecName: Full=40S ribosomal protein S4
gi|1401207|gb|AAD05368.1| small subunit ribosomal protein 4 [Bigelowiella natans]
gi|75756456|gb|ABA27349.1| ribosomal protein S4 [Bigelowiella natans]
Length = 242
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
V+ K +P MD +S P N+++R+L G+ ++ I E K+CKV +
Sbjct: 72 VNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIIN 131
Query: 67 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGR 126
I T D R ++ IK D++ + ++I +KF+VG++ ++T G++ G
Sbjct: 132 ASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGT 191
Query: 127 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+ +IK K K + IH++ G + + ++ IG+ +SL
Sbjct: 192 IAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>gi|413953820|gb|AFW86469.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
Length = 232
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 50/102 (49%), Gaps = 44/102 (43%)
Query: 40 TKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 99
T G FRLH IRDE+AKFKLC RSVQ
Sbjct: 155 TTGCFRLHPIRDEDAKFKLCNRRSVQ---------------------------------- 180
Query: 100 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
FDVGN+VMVTGGRN GRVG+IKN EKHKG FE
Sbjct: 181 ----------FDVGNMVMVTGGRNTGRVGVIKNWEKHKGIFE 212
>gi|290558898|gb|EFD92288.1| RNA-binding S4 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 220
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIR-DEEAKFKLCKVR 62
+V VD K ++ Y GF D+VS+ +N+ L++ G+ +L S++ DE+ KL KV
Sbjct: 70 YVFVDGKKVIEEKYVVGFSDIVSV---KDNYFLVW-LSGKGKLISVKKDEKIDSKLIKVM 125
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGR 122
S G+KG+ + T D R I YP ++ ND++ LDL++ IT I F+ G ++V G+
Sbjct: 126 SKHKGKKGMNILFTNDSRNIVYPKDDVQINDSVSLDLKSYSITGKIPFESGKNIIVFSGK 185
Query: 123 NRGRVGIIK 131
N G+ G+IK
Sbjct: 186 NAGKKGVIK 194
>gi|226505810|ref|NP_001144419.1| uncharacterized protein LOC100277363 [Zea mays]
gi|195610924|gb|ACG27292.1| hypothetical protein [Zea mays]
gi|195641838|gb|ACG40387.1| hypothetical protein [Zea mays]
Length = 97
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 51/106 (48%), Gaps = 44/106 (41%)
Query: 40 TKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 99
T G FRLH IRDE+AKFKLC SVQ
Sbjct: 16 TTGCFRLHPIRDEDAKFKLCNGMSVQ---------------------------------- 41
Query: 100 ETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
FDVGN+VMVTGGRN GRVG+IKN EKHKG FE I +
Sbjct: 42 ----------FDVGNMVMVTGGRNTGRVGVIKNWEKHKGIFEVIDV 77
>gi|70606400|ref|YP_255270.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius DSM 639]
gi|449066612|ref|YP_007433694.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449068886|ref|YP_007435967.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
gi|3914911|sp|O05634.1|RS4E_SULAC RecName: Full=30S ribosomal protein S4e
gi|2052258|emb|CAA69089.1| ribosomal protein S4E [Sulfolobus acidocaldarius]
gi|68567048|gb|AAY79977.1| 30S ribosomal protein S4E [Sulfolobus acidocaldarius DSM 639]
gi|449035120|gb|AGE70546.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
gi|449037394|gb|AGE72819.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
Length = 244
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD KVR D YP G MDVV IP + R++ D +I E+AK+K ++ +
Sbjct: 65 VLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNK 124
Query: 65 QFGQKGIPYINTYDGRTI--------RYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G+ +N DGR I +Y P + T+K++L KIT G
Sbjct: 125 TTLKSGVLQLNLEDGRNILLKGEELSQYNLPTL---TTLKIELPEQKITTAYTIKEGVYA 181
Query: 117 MVTGGRN---RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
M+ GGRN G++ I+ + + + + ++ G F T L NV IG+
Sbjct: 182 MIIGGRNAGLHGKISKIQLAKYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>gi|21228238|ref|NP_634160.1| 30S ribosomal protein S4 [Methanosarcina mazei Go1]
gi|452210673|ref|YP_007490787.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
gi|23822141|sp|Q8PV38.1|RS4E_METMA RecName: Full=30S ribosomal protein S4e
gi|20906694|gb|AAM31832.1| SSU ribosomal protein S4E [Methanosarcina mazei Go1]
gi|452100575|gb|AGF97515.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
Length = 235
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD R D +P G DV+++P NE +R+L D KGR L+ + + KLC++ +
Sbjct: 65 VLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLNETNVN-KLCRINNK 123
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N DG I + D++ L + + + +KF+VGN+ MV GG++
Sbjct: 124 TTVKGGKIQLNLNDGTNILGSNDY-GTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHS 182
Query: 125 GRVG-IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
G G I++ RE T+ I +F T V IG+ KP + L
Sbjct: 183 GETGKIMEIREVKSSRHNTVMISGET--DFETIEDYVIVIGE-DKPEIRL 229
>gi|119595939|gb|EAW75533.1| hCG2043550 [Homo sapiens]
Length = 157
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 55
MQR + ++ KVRTD TY AGFMDV SI K+ ENFRL+YDTKGRF +H I EEAK
Sbjct: 66 MQRFIKINGKVRTDITYSAGFMDVNSIDKSGENFRLIYDTKGRFAVHRITPEEAK 120
>gi|134045213|ref|YP_001096699.1| 30S ribosomal protein S4e [Methanococcus maripaludis C5]
gi|189045352|sp|A4FWA9.1|RS4E_METM5 RecName: Full=30S ribosomal protein S4e
gi|132662838|gb|ABO34484.1| SSU ribosomal protein S4E [Methanococcus maripaludis C5]
Length = 244
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L + ++A KLCK+ +
Sbjct: 71 ILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLK--KTDKADAKLCKIVNK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR + + + K D++ + + I + F G +
Sbjct: 129 TVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
VTGG++ G I E + + +++ G +F T VF +G+ +P +S+
Sbjct: 189 YVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|431897154|gb|ELK06416.1| 40S ribosomal protein S4 [Pteropus alecto]
Length = 131
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 95 IKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 154
I++DLET KIT FI+ D GN+ MVTGG N GR+ +I NRE+H GS + +H++D G+ FA
Sbjct: 28 IQIDLETGKITNFIRSDTGNLCMVTGGGNLGRIAVITNRERHPGSSDVVHVKDVNGNSFA 87
>gi|262118828|pdb|3KBG|A Chain A, Crystal Structure Of The 30s Ribosomal Protein S4e From
Thermoplasma Acidophilum. Northeast Structural Genomics
Consortium Target Tar28
Length = 213
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD K +K + GF DV+ I E++R++Y+ +G L E A KL KVRS
Sbjct: 36 VKVDGKTVREKKFAVGFXDVIEI--NGESYRVVYNDQGALVLXKETKERASXKLLKVRSK 93
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ T+DGRT D IK D + + + KI+E IK GN +T G +
Sbjct: 94 VIAPGNRIQLGTHDGRTFITDDKSIKVGDVLAVSVPDXKISEIIKXQPGNKAYITAGSHV 153
Query: 125 GRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
+ G I E +GS +H Q+ F+T +VF IG +V P+
Sbjct: 154 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFXIGSSKFSFVLSPE 201
>gi|414873615|tpg|DAA52172.1| TPA: putative glycogen synthase kinase family protein [Zea mays]
Length = 263
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 47 HSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 106
++ R + + + + VQ Q + Y+NTYDGRT+ YPDPLIKANDTIK+DLETNKI +
Sbjct: 178 YAYRADYSGLSFGRDQYVQALQGEVSYLNTYDGRTMHYPDPLIKANDTIKIDLETNKIMD 237
Query: 107 FIKF 110
FIK
Sbjct: 238 FIKL 241
>gi|414873616|tpg|DAA52173.1| TPA: putative glycogen synthase kinase family protein [Zea mays]
Length = 217
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 47 HSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITE 106
++ R + + + + VQ Q + Y+NTYDGRT+ YPDPLIKANDTIK+DLETNKI +
Sbjct: 132 YAYRADYSGLSFGRDQYVQALQGEVSYLNTYDGRTMHYPDPLIKANDTIKIDLETNKIMD 191
Query: 107 FIKF 110
FIK
Sbjct: 192 FIKL 195
>gi|16082261|ref|NP_394715.1| 30S ribosomal protein S4e [Thermoplasma acidophilum DSM 1728]
gi|1373335|gb|AAB02244.1| ribosomal protein s4e [Thermoplasma acidophilum]
gi|10640605|emb|CAC12383.1| 30S RIBOSOMAL PROTEIN S4E [Thermoplasma acidophilum]
Length = 237
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD K +K + GFMDV+ I E++R++Y+ +G L E A KL KVRS
Sbjct: 68 VKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSK 125
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ T+DGRT D K D + + KI+E IK GN +T G +
Sbjct: 126 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 185
Query: 125 GRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
+ G I E +GS +H Q+ F+T +VF IG +V P+
Sbjct: 186 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 233
>gi|17380573|sp|Q56230.2|RS4E_THEAC RecName: Full=30S ribosomal protein S4e
Length = 235
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD K +K + GFMDV+ I E++R++Y+ +G L E A KL KVRS
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ T+DGRT D K D + + KI+E IK GN +T G +
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHV 183
Query: 125 GRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPK 175
+ G I E +GS +H Q+ F+T +VF IG +V P+
Sbjct: 184 NQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 231
>gi|282164903|ref|YP_003357288.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
gi|282157217|dbj|BAI62305.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
Length = 234
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD KVR D +P G DV+SIP + N+R++ G+F+L + D A KL K+ +
Sbjct: 66 VLVDGKVRKDHHFPVGLFDVISIPDISANYRVMIGQDGKFKLVPVSD--ANSKLLKIVNK 123
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
G +N +DG T+ + D+I L + I + K++VG+ VTGG++
Sbjct: 124 TTVTGGRTQLNFHDGTTMLASNDY-HTKDSIILKVPEKSIDQHFKYEVGSTAFVTGGKHA 182
Query: 125 GRVGIIK 131
G VG IK
Sbjct: 183 GVVGKIK 189
>gi|351699091|gb|EHB02010.1| Strumpellin [Heterocephalus glaber]
Length = 1187
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 25 VSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 84
+S KT ++F L Y+TKG +H E AK LCKV + G KG P + T++ T
Sbjct: 4 ISTDKTAQHFHLTYETKGCPAVHRATPEVAKNMLCKVSGLSVGIKGAPQLVTHNACTTHC 63
Query: 85 PDPLIKANDTIKLDLETNKITEFIKFD 111
PDP +K NDTI+ DL T KIT+F K D
Sbjct: 64 PDPFVKVNDTIQTDLGTGKITDFTKAD 90
>gi|156938197|ref|YP_001435993.1| 30S ribosomal protein S4 [Ignicoccus hospitalis KIN4/I]
gi|189045350|sp|A8ACD4.1|RS4E_IGNH4 RecName: Full=30S ribosomal protein S4e
gi|156567181|gb|ABU82586.1| SSU ribosomal protein S4E [Ignicoccus hospitalis KIN4/I]
Length = 255
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 7 VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQF 66
VD +VR D +P G MDV+ I +E +R++ I EEAK K+C++ +
Sbjct: 74 VDGRVRKDYKFPVGAMDVIEIVGADEYYRMIPYPVKYLVPMRIDAEEAKKKICRIENKVT 133
Query: 67 GQKGIPYINTYDGRT--IRYPDP--LIKANDT-----IKLDLETNKITEFIKFDVGNVVM 117
+ G +N +DGR IR DP ++A + + + + +I +++ F+ G + +
Sbjct: 134 VKGGHVQLNLHDGRNVLIRVEDPRNPVEAQEYKTLGGLLITVPEQEILDYVPFEEGVIAI 193
Query: 118 VTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
V GRN GRVG I+ K G +T + ++D F T VF IGK +P + LP+G
Sbjct: 194 VKSGRNVGRVGRIEEIVKGMGRKKTLVKMRDVHDEVFYTVAEYVFPIGK-EEPLIKLPEG 252
>gi|150402580|ref|YP_001329874.1| 30S ribosomal protein S4e [Methanococcus maripaludis C7]
gi|189045353|sp|A6VGZ7.1|RS4E_METM7 RecName: Full=30S ribosomal protein S4e
gi|150033610|gb|ABR65723.1| Ribosomal protein S4E, central [Methanococcus maripaludis C7]
Length = 244
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L +A KLCK+ +
Sbjct: 71 ILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--KLCKIVNK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR + + + K D++ + + I + F G +
Sbjct: 129 TVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
VTGG++ G I E + + +++ G +F T VF +G+ +P +S+
Sbjct: 189 YVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|336477149|ref|YP_004616290.1| 30S ribosomal protein S4 [Methanosalsum zhilinae DSM 4017]
gi|335930530|gb|AEH61071.1| Ribosomal protein S4E, central domain protein [Methanosalsum
zhilinae DSM 4017]
Length = 236
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LVD VR D +P G D+++IP N ++ +L D KGR L+ ++D KLCK+
Sbjct: 66 ILVDGTVRKDVRFPIGLFDIITIPLNNLSYIVLLDRKGRLVLNQLQDITTT-KLCKINGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N DG I K ND++ + L +I + I++ GN+ M+ GG +
Sbjct: 125 TTVKGGKVQLNLSDGTNIIATSEY-KPNDSVIISLPDKEIVKHIEYKEGNLAMIVGGTHS 183
Query: 125 GRVGIIKNREKHKGS 139
G +G I++ K + S
Sbjct: 184 GELGTIRSINKVRSS 198
>gi|305662603|ref|YP_003858891.1| 30S ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
gi|304377172|gb|ADM27011.1| SSU ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
Length = 252
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLL-YDTKGRFRLHSIRDEEAKFKLCKVRS 63
+ VD R D +P G MD +SIP+ + R++ Y TK + + +I EEA KL ++ +
Sbjct: 71 IYVDGVQRRDYKFPIGPMDSISIPEIDMYLRMVPYPTKYLWYI-NISKEEACLKLVRIEN 129
Query: 64 VQFGQKGIPYINTYDGRTI--RYPDPL-------IKANDTIKLDLETNKITEFIKFDVGN 114
+ G + T+DGR I R DP K DT+ +++ + +I + I D+G
Sbjct: 130 KLTVKNGHIQLGTHDGRNILIRVKDPRNPVEAMNYKTLDTLLIEVPSQRIIQHIPLDIGK 189
Query: 115 VVMVTGGRNRGRVG---IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWV 171
+V GRN GR+G I+ RE K + ++D GH F T L V +G KP +
Sbjct: 190 YAIVIHGRNVGRLGKILSIEVREGMKRRRALVTMEDINGHRFQTILDYVMVVG-DEKPVI 248
Query: 172 SL 173
L
Sbjct: 249 KL 250
>gi|159905645|ref|YP_001549307.1| 30S ribosomal protein S4e [Methanococcus maripaludis C6]
gi|226697783|sp|A9A9Q2.1|RS4E_METM6 RecName: Full=30S ribosomal protein S4e
gi|159887138|gb|ABX02075.1| Ribosomal protein S4E, central domain protein [Methanococcus
maripaludis C6]
Length = 244
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L +A KLCK+ +
Sbjct: 71 ILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLKKTDKTDA--KLCKIVNK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR + + + K D++ + + I + F G +
Sbjct: 129 TVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+TGG++ G I E + + +++ G +F T VF +G+ +P +S+
Sbjct: 189 YITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|1001943|gb|AAA76860.1| ribosomal protein S4, partial [Dictyostelium discoideum]
Length = 73
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 130 IKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 186
+ +REKH GSF+ +H+ D GH+FATRL NVF IGK ++ +VSLP GKG++ S ++E
Sbjct: 1 VTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDE 57
>gi|432331999|ref|YP_007250142.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
gi|432138708|gb|AGB03635.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
Length = 241
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q+ V+V+ + D G D++++PK N+ +R+L D GR I E AK +LCKV
Sbjct: 62 QKDVIVNGRPCRDPKMGIGIFDIIALPKINKYYRILRDRDGRHVSVEIDAEAAKTRLCKV 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIKFDVGNVVMV 118
++ G +N DG I D K+ D++ + LE KI + F VGN+ M+
Sbjct: 122 KNKTTIAGGKVQLNLRDGANI-LADNTYKSGDSVVVSLEPENRFKIVDHFPFVVGNMAMI 180
Query: 119 TGGRNRGRVGIIKNREKHKGSFET-IHIQDA-LGHEFATRLGNVFTIGK 165
GG++ G V I + K GS I +QD G +F T ++ +GK
Sbjct: 181 IGGKHSGNVARIVDIVKMPGSVPNKIILQDEKTGTKFDTIAPYIYMVGK 229
>gi|126178526|ref|YP_001046491.1| 30S ribosomal protein S4 [Methanoculleus marisnigri JR1]
gi|125861320|gb|ABN56509.1| SSU ribosomal protein S4E [Methanoculleus marisnigri JR1]
Length = 242
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR VLV+ + D G D+VSIPK +++R+ D KG I E AK +LCK+
Sbjct: 62 QRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN-----KITEFIKFDVGNVV 116
R+ + G +N G + D KA D++ + L T+ +I + + GNV
Sbjct: 122 RNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVA 180
Query: 117 MVTGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGK 165
M+ GG++ G+VG I + S I D+ G F T VF +G+
Sbjct: 181 MIVGGKHSGKVGRIVEIIRTASSVPNHVILTDDSAGERFETIEEYVFMVGR 231
>gi|77024951|gb|ABA61378.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 232
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R + VD +V TD G MDV+S+ ++++R + D G+ R SI +EA KLC++
Sbjct: 65 RKIRVDGRVTTDIRRGVGVMDVLSV--GDDHYRCVLDKNGKLRYASISAKEAGHKLCRID 122
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ G+ +N +DGR I D DT+ LD+E+ KI KF+ G + GG
Sbjct: 123 GKTTIKGGVTQLNLHDGRNILVDDANKYNTMDTLVLDVESQKIEGHHKFEAGANCYLIGG 182
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 169
+ G + + S + + L +F T + +VF IG P
Sbjct: 183 SHTGGTAAMNEYLVKRSSKD----NEVLFEDFGTIVDHVFVIGDANLP 226
>gi|281343266|gb|EFB18850.1| hypothetical protein PANDA_013892 [Ailuropoda melanoleuca]
Length = 283
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q+ + + K RTD D KT ENF L+ DTK F + EEAK++LCKV
Sbjct: 86 QQFIKIKCKGRTDSPLRCFREDQPD--KTEENFYLICDTKRCFAVLPFAPEEAKYQLCKV 143
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLET 101
R++ KGIP++ T+D TI PD LI D I+++L+T
Sbjct: 144 RTILVCMKGIPHLVTHDACTICCPDSLINVKDAIQINLDT 183
>gi|146302888|ref|YP_001190204.1| 30S ribosomal protein S4e [Metallosphaera sedula DSM 5348]
gi|189045355|sp|A4YCX8.1|RS4E_METS5 RecName: Full=30S ribosomal protein S4e
gi|145701138|gb|ABP94280.1| SSU ribosomal protein S4E [Metallosphaera sedula DSM 5348]
Length = 241
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD +VR D YP G MDV++IP + R++ D + I +EE+KFKL ++ +
Sbjct: 65 VLVDGRVRRDYKYPVGLMDVIAIPHADLYLRIVPDRARLLKPVKISEEESKFKLVRLLNK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKAND----------TIKLDLETNKITEFIKFDVGN 114
+ G+ N DGR + LI T+K+ + +I F
Sbjct: 125 TLVKGGLLQFNLEDGRNL-----LISKESTEMFKLPTLTTLKISIPNQEILGVYGFKENV 179
Query: 115 VVMVTGGRNRGRVGIIKNREKHKGS---FETIHIQDALGHEFATRLGNVFTIGK 165
VM GG+N G +G +K + + + I+ G E+ T L N IG+
Sbjct: 180 YVMAVGGKNAGIIGQLKRIQTSPYKTRRYSIVVIRSPDGSEYETNLENAMVIGE 233
>gi|45358974|ref|NP_988531.1| 30S ribosomal protein S4e [Methanococcus maripaludis S2]
gi|340624721|ref|YP_004743174.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
gi|50403627|sp|P62428.1|RS4E_METMP RecName: Full=30S ribosomal protein S4e
gi|45047840|emb|CAF30967.1| SSU ribosomal protein S4E [Methanococcus maripaludis S2]
gi|339904989|gb|AEK20431.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
Length = 244
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L+D R + +PAG MDV+SIP+ +E + +L+D GR L + ++ KLCK+ +
Sbjct: 71 ILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLK--KTDKTDVKLCKIVNK 128
Query: 65 QFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVV 116
+ G +N +DGR + + + K D++ + + I + F G +
Sbjct: 129 TVVKGGNIQLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLA 188
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+TGG++ G I E + + +++ G +F T VF +G+ +P +S+
Sbjct: 189 YITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
>gi|383319766|ref|YP_005380607.1| 30S ribosomal protein S4 [Methanocella conradii HZ254]
gi|379321136|gb|AFD00089.1| SSU ribosomal protein S4E [Methanocella conradii HZ254]
Length = 236
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD KVR D +P G DV+SIP+ N N+R++ G+F+L I D A KL K+ +
Sbjct: 68 VLVDGKVRKDHRFPVGLFDVISIPELNANYRVMIGQDGKFKLVPIAD--AGMKLLKIVNK 125
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
G + +DG T+ + D++ L + I + +K++VG++ V G++
Sbjct: 126 TMVPGGKIQLGFHDGTTMLASNDY-HTKDSLVLKVPEKSIDQHLKYEVGSMAFVIDGKHA 184
Query: 125 GRVGIIKN 132
G +G IK+
Sbjct: 185 GTLGKIKD 192
>gi|414588562|tpg|DAA39133.1| TPA: hypothetical protein ZEAMMB73_139696 [Zea mays]
Length = 383
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 35/38 (92%)
Query: 108 IKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHI 145
IKFDV NVVMVTGGRN GRVG+IKNREKHK SFETIH+
Sbjct: 338 IKFDVDNVVMVTGGRNTGRVGVIKNREKHKASFETIHV 375
>gi|429217547|ref|YP_007175537.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
gi|429134076|gb|AFZ71088.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
Length = 252
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+ + VD +V D YP MDV+ IP+ +E +R++ L+ I EEA K ++
Sbjct: 68 ENKIKVDGRVVNDYKYPLSVMDVLEIPENDEYYRVIPYPTDYLGLYKITKEEASLKPVRI 127
Query: 62 RSVQFGQKGIPYINTYDGRTI-------RYPDPLIKANDTIKLDLETNKITEFIKFDVGN 114
+ + G +N GR I + K DT+ + L +I E I F +G+
Sbjct: 128 ENKTIVKGGNLQLNLSGGRNILVKFKEGEKKEVPYKTLDTLLITLPNQEIKEHIPFQIGD 187
Query: 115 VVMVTGGRNRGRVGIIKNREKHKG-SFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSL 173
+V G+N G++G I + K G T+ ++ G + T L + +GK KP +SL
Sbjct: 188 YALVIWGKNVGKLGKIVSVNKQWGRKSSTVTLEGKSGRKIQTILDYILIVGK-EKPVISL 246
Query: 174 P 174
P
Sbjct: 247 P 247
>gi|119719161|ref|YP_919656.1| 30S ribosomal protein S4e [Thermofilum pendens Hrk 5]
gi|119524281|gb|ABL77653.1| SSU ribosomal protein S4E [Thermofilum pendens Hrk 5]
Length = 251
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R + VD +V TD +P G MDV+ I + +R++ D + R I+ EEA +KL ++
Sbjct: 70 SRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQI 129
Query: 62 RSVQFGQKGIPYINTYDGRTI-------RYPDPL-IKANDTIKLDLETNKITEFIKFDVG 113
R + G +DGR + Y + K D + + + I + F+VG
Sbjct: 130 RRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVG 189
Query: 114 NVVMVTGGRNRGRVGIIKN-REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVS 172
+ +V GRN G +G I ++ K S + ++DA G + T L V +GK KP V+
Sbjct: 190 TLAIVVDGRNVGFMGRINAIQQVFKRSRALVELEDASGAKSRTILQYVLPVGK-EKPLVT 248
Query: 173 L 173
+
Sbjct: 249 V 249
>gi|307354335|ref|YP_003895386.1| 30S ribosomal protein S4E [Methanoplanus petrolearius DSM 11571]
gi|307157568|gb|ADN36948.1| Ribosomal protein S4E, central domain protein [Methanoplanus
petrolearius DSM 11571]
Length = 242
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R V+++ TD G D++SIPK ++ +R+L D KG + I ++AK +LCKV
Sbjct: 62 ERSVILNGVPCTDSKLGIGVFDIISIPKVDKYYRILRDKKGDYVSIPISADDAKTRLCKV 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIKFDVGNVVMV 118
+ + G +N G + K D+I + LE + K+T+ F G+V M+
Sbjct: 122 ENKTIVKGGKIQLNLRYGANLIVDSQDYKPKDSIVIGLEGDNRFKVTDHYPFAEGSVAMI 181
Query: 119 TGGRNRGRVGIIKNREKHKGSFET-IHIQDA-LGHEFATRLGNVFTIGKGTKPWV 171
GG + G++G I + GS ++++D G +F T +F IG T+P V
Sbjct: 182 IGGSHSGKIGRISKIDTIPGSISNRVYLKDEKSGEDFDTIEEYIFVIGT-TEPAV 235
>gi|294496005|ref|YP_003542498.1| 30S ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
gi|292667004|gb|ADE36853.1| SSU ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
Length = 236
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD VR D P G MD+++IP N ++R+L D GR L I E K KLC++
Sbjct: 66 VLVDGVVRKDVRLPVGIMDIITIPSDNTSYRVLLDRMGRLSLQKIGGIEEK-KLCRIDGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ G +N DG + + K D+I + + +I + I++ GN+ ++ GG +
Sbjct: 125 TCIKGGKLQLNLDDGSNVLGSNDY-KRKDSIVISIPGKEILKHIEYKEGNLALIVGGSHT 183
Query: 125 GRVGII 130
G VG I
Sbjct: 184 GEVGKI 189
>gi|123477528|ref|XP_001321931.1| 40S ribosomal protein S4 [Trichomonas vaginalis G3]
gi|121904767|gb|EAY09708.1| 40S ribosomal protein S4, putative [Trichomonas vaginalis G3]
Length = 74
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
MVT G N GRVG I+ EK SF+ +H++D G FATR+ NVF IG+ P +SLP
Sbjct: 1 MVTAGGNVGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAR 60
Query: 177 KGIKLSIIE 185
+G++ SI+E
Sbjct: 61 EGVRPSILE 69
>gi|403260022|ref|XP_003922488.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Saimiri
boliviensis boliviensis]
Length = 58
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 112 VGNVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP 169
+GNV MV GG N G VG+I NRE++ GSF +H++DA + FA RL N+F IG KP
Sbjct: 1 MGNVCMVIGGANLGCVGVITNRERYPGSFNVVHVKDANDNSFAMRLSNIFVIGNDNKP 58
>gi|374633056|ref|ZP_09705423.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
gi|373524540|gb|EHP69417.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
Length = 242
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V+VD +VR D YP G MDV++IP + +R++ D ++ I EEA +KL ++
Sbjct: 65 VMVDGRVRRDYKYPVGLMDVITIPSASLYYRVVPDRVRLLKVVKISSEEAGYKLVRLTGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPL------IKANDTIKLDLETNKITEFIKFDVGNVVMV 118
+ +N DGR I D + T K+ + + +I + G VM
Sbjct: 125 TVVKGSALQLNFEDGRNILLKDKQEASQFNMPTLTTFKIAIPSQQILGTYQLKEGVYVMA 184
Query: 119 TGGRNRGRVGIIK-----NREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
GG+N G +G +K N +K + + I +D G E+ T L N +G+
Sbjct: 185 IGGKNAGVIGTLKRIQWANYKKKRHTIVVIRGED--GTEYETNLENSMVVGE 234
>gi|330508486|ref|YP_004384914.1| 30S ribosomal protein S4E [Methanosaeta concilii GP6]
gi|328929294|gb|AEB69096.1| ribosomal protein S4E [Methanosaeta concilii GP6]
Length = 234
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLVD K + D P G DV+ +P ++ +R+L D KG F L + A+ KL ++ +
Sbjct: 66 VLVDGKSQKDHKLPIGIFDVIGLPLLDQQYRMLKDEKGMFYLSLLEPGSAR-KLARIENK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ +N DG + + K D++ L + I E I+F VGN+ MV GG++
Sbjct: 125 TVLRGNKQQLNLSDGSN-KLAEGDYKVGDSLVLSIPEKDIDERIEFKVGNLAMVVGGKHS 183
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
G+ G IK+ K K S I EF T V+ IG
Sbjct: 184 GQTGKIKDIIKVKSSQPNRVIISG-DKEFETIEEYVYMIG 222
>gi|13541168|ref|NP_110856.1| 30S ribosomal protein S4e [Thermoplasma volcanium GSS1]
gi|17368559|sp|Q97BW4.1|RS4E_THEVO RecName: Full=30S ribosomal protein S4e
gi|14324556|dbj|BAB59483.1| ribosomal protein small subunit S4 [Thermoplasma volcanium GSS1]
Length = 235
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD KV ++ + GFMDV+ I + E++R++Y+ +G L S + A K +V++
Sbjct: 66 VKVDGKVVKERKFGVGFMDVIEI--SGESYRVVYNNQGALVLVSESKDRANMKPLQVKNK 123
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ +DGR + D I D + L KITE IK GN +TGG +
Sbjct: 124 VIAPGNKIQLGFHDGRVMVTEDRSISVGDVVIASLPDMKITEIIKMQPGNKAFITGGSHV 183
Query: 125 GRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIG 164
G G I E K S +H + F T +VF IG
Sbjct: 184 GETGTISKIEIKESSSANLVHFDEG----FTTVKDHVFVIG 220
>gi|449707481|gb|EMD47134.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 112
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 55
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK
Sbjct: 49 NRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102
>gi|449703142|gb|EMD43643.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
gi|449709756|gb|EMD48960.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
Length = 106
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 55
R + +D K+RTD YP GFMDV+SIP+T ENFRL+Y+TK RF L + E+AK
Sbjct: 49 NRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102
>gi|355571371|ref|ZP_09042623.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
gi|354825759|gb|EHF09981.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
NOBI-1]
Length = 241
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q+ V+++ + + G D++SIP+ +FR+L D KGR + I E AK +L K+
Sbjct: 62 QKEVIINGRPCRNPRMGIGIFDIISIPRIGRHFRILRDKKGRHKTIEIDAEAAKSRLAKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK---ITEFIKFDVGNVVMV 118
R+ G +N G + D D+I L LE I + F VGN+ MV
Sbjct: 122 RNKTIVPGGKVQLNLRFGANV-IADNRYHPGDSIVLSLEPENRFAILDHFPFAVGNMAMV 180
Query: 119 TGGRNRGRVGIIKNREKHKGSFET-IHIQD-ALGHEFATRLGNVFTIGK 165
GGR+ G+V I EK GS + ++D A G F T ++ +G+
Sbjct: 181 IGGRHSGKVARIVGIEKVPGSVPNRVILEDPADGSRFETIDEYIYMVGR 229
>gi|342319363|gb|EGU11312.1| Sensitive to high expression protein 9 [Rhodotorula glutinis ATCC
204091]
Length = 583
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 140 FETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 186
++ +H++D L EFATRL NVF IG G K +VSLPKGKG+KLSI EE
Sbjct: 136 YDIVHVRDVLDREFATRLSNVFVIGAGAKAFVSLPKGKGVKLSIAEE 182
>gi|413948141|gb|AFW80790.1| hypothetical protein ZEAMMB73_670275 [Zea mays]
Length = 135
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 34/35 (97%)
Query: 75 NTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIK 109
+TYDGRTIRYPDPLIKANDTIK+DLETNKI +FIK
Sbjct: 78 STYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIK 112
>gi|193083853|gb|ACF09534.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 194
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R V VD ++ TD++ G MDV+++ +++R + DT G+ R I + K+C+V
Sbjct: 26 SRKVSVDGRIETDRSRGVGLMDVLTVGA--DSYRCVLDTNGKLRYRPIPKKAVGSKICRV 83
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
S + G I+ +DGR I D K+ D++ + L I+ ++ G + +TG
Sbjct: 84 MSKTTIKGGKTQIHLHDGRNIVVDDASKYKSGDSLSISLPDQAISSHVEMKNGALAYLTG 143
Query: 121 GRNRGRVGIIKNRE------KHKGSFETIHIQDALGHEFATRLGNVFTIGKGT 167
G + G +I++++ ++ SFE +F T VF IGK T
Sbjct: 144 GSHIGETAVIQDQDVKRSSKPNETSFE----------DFGTITDYVFVIGKAT 186
>gi|67621151|ref|XP_667746.1| ribosomal protein S4 [Cryptosporidium hominis TU502]
gi|54658907|gb|EAL37515.1| ribosomal protein S4 [Cryptosporidium hominis]
Length = 82
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%)
Query: 115 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLP 174
+ MVTGGR++GRVG I + E+ G+ + I+D G FAT + N+F IG+ KP V+LP
Sbjct: 1 MCMVTGGRSQGRVGTITHFERKMGAQCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLP 60
Query: 175 KGKGIKLSIIEE 186
K KGI+LS +E+
Sbjct: 61 KDKGIRLSNVED 72
>gi|159042387|ref|YP_001541639.1| 30S ribosomal protein S4e [Caldivirga maquilingensis IC-167]
gi|189045348|sp|A8MB20.1|RS4E_CALMQ RecName: Full=30S ribosomal protein S4e
gi|157921222|gb|ABW02649.1| Ribosomal protein S4E, central [Caldivirga maquilingensis IC-167]
Length = 237
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V VD KVR D YP G MDV+ + NE +R++ D R I EA K+C++
Sbjct: 64 YVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIED 123
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDT---IKLDLETNKITEFIKFDVGNVVMVTG 120
+ G +N +DGR I + +T + ++LE K+ ++ V+
Sbjct: 124 KTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFN 183
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 165
G N GR G + N + + I A EF T L + IGK
Sbjct: 184 GVNVGRHGTLINWVRSFRKRDAIATVKAKDSEFRTVLNYLLVIGK 228
>gi|374630578|ref|ZP_09702963.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
gi|373908691|gb|EHQ36795.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
Length = 242
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R ++V+ TD G D++SIPK + +R+L + KG + I ++ AK +LCK+
Sbjct: 62 DRSLIVNGSPCTDSKMGIGVFDIISIPKIGKYYRILRNKKGDYVSVEITEDAAKSRLCKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIKFDVGNVVMV 118
+ G +N G + D++ L LE K+ + F VG+V M+
Sbjct: 122 SDKTIVKGGRIQLNLRYGANVIVDSQEYNPKDSVVLSLEPETRFKVIDHFPFAVGSVAMI 181
Query: 119 TGGRNRGRVGIIKNREKHKGSFET-IHI-QDALGHEFATRLGNVFTIGK 165
GG++ G+VG I GS I++ ++ G EF T VF +GK
Sbjct: 182 IGGKHSGKVGKISEICVVPGSIPNRIYLTEEKTGVEFDTIEDYVFIVGK 230
>gi|219851119|ref|YP_002465551.1| 30S ribosomal protein S4e [Methanosphaerula palustris E1-9c]
gi|219545378|gb|ACL15828.1| Ribosomal protein S4E, central domain protein [Methanosphaerula
palustris E1-9c]
Length = 241
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R V+V+ + D G D+++IPK + +R+L GR SI E+AK +LCKV
Sbjct: 62 ERSVIVNGRPCRDPKMGIGIFDIIAIPKMGKYYRILLAKNGRLVAISIEAEDAKSRLCKV 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK---ITEFIKFDVGNVVMV 118
+ G +N G + + D++ L LE + + + + GN+ MV
Sbjct: 122 QDKTIVSGGKTQVNLTYGANV-LTEEACSPKDSLVLSLEPEQRFTVLDHFPYKEGNMAMV 180
Query: 119 TGGRNRGRVGIIKNREKHKGSFETIHIQDAL--GHEFATRLGNVFTIGKGT 167
GGR+ G++G I+ GS I + + G +F T ++ +G+ T
Sbjct: 181 IGGRHSGKIGKIQTITTVMGSTPNTVILEEVGTGTQFDTIDSYIYMVGRET 231
>gi|374724277|gb|EHR76357.1| 30S ribosomal protein S4e [uncultured marine group II
euryarchaeote]
Length = 233
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 3 RHVL------VDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKF 56
RH+L +D +V + G MDV+S+ + ++R + D GR R I +EA +
Sbjct: 60 RHILHNGLAMIDGRVCKETRRGVGLMDVLSL--GDNHYRCVLDHNGRLRYRPISADEAGW 117
Query: 57 KLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFDVGNV 115
K+C++ + G +N +DGR I D ++KL L + +I E IKF G
Sbjct: 118 KVCRIEGKSTIKGGKTQLNLHDGRNIIVDDAAEYSTGSSLKLALPSQEIIEHIKFAEGVR 177
Query: 116 VMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGTKP 169
+ GG + G + + E + S + +D F T NVF +G T P
Sbjct: 178 CYLIGGAHVGGFANMTSFEVKRSSMANEVQFED-----FGTVATNVFAVGSATLP 227
>gi|47079417|gb|AAT10160.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 232
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 3 RHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVR 62
R VLVD ++ TD G MDV+++ + ++FR + D G+ R SI D+ A KLC+V
Sbjct: 65 RQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVM 122
Query: 63 SVQFGQKGIPYINTYDGRTIRYPDP-LIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
G I+ +DGR I D L + DT+ + L + F G +TGG
Sbjct: 123 GKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGG 182
Query: 122 RNRGRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIG 164
+ G + +R+ K + D F T VF IG
Sbjct: 183 SHIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>gi|41615262|ref|NP_963760.1| 30S ribosomal protein S4e [Nanoarchaeum equitans Kin4-M]
gi|54039525|sp|P62429.1|RS4E_NANEQ RecName: Full=30S ribosomal protein S4e
gi|40068986|gb|AAR39321.1| NEQ478 [Nanoarchaeum equitans Kin4-M]
Length = 234
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK-VRS 63
VLVD + D +P G DV++IP+ NE +R+L D +G+ L I EEA K K +R
Sbjct: 71 VLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRK 130
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
V I Y T DGRT D K + + ++ KI E I + + G++
Sbjct: 131 VSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGKH 188
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 163
GR+G+IK K + I + G T L N+ +
Sbjct: 189 TGRIGVIKEVIKTDMPWPNIVRLEVAGEVGETWLDNIIPV 228
>gi|448503700|ref|ZP_21613329.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
gi|445691901|gb|ELZ44084.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
Length = 237
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LV+ +D+ P G D+++ P+ E FR+ D GR L + ++ A +L K+ +
Sbjct: 65 ILVNGDAVSDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G+ + +DG +R D + ND+I +D ET +I +++ G +V G++
Sbjct: 125 TVVPGGVVQLTLHDGTNVRVDDDADYETNDSIVVDNETKEIVAHFEYEEGELVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
G++G I++ + GS
Sbjct: 185 AGQIGEIEDIDVTLGS 200
>gi|170516825|gb|ACB15227.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 231
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R V+VD ++ TD G MDV+S+ + +NFR + DT G+ R I A K+C+V
Sbjct: 64 SRQVMVDGRIETDDGRGVGLMDVLSVGE--KNFRCVLDTNGKLRYRPIPKNAAGSKICRV 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ ++ +DGR + D K+ D++ + L +IT + F G +TG
Sbjct: 122 TGKTTIRGAKTQLHLHDGRNLLMDDASAYKSGDSVIISLPEQQITSHLPFTEGAQSYMTG 181
Query: 121 GRNRGRVGIIKNRE-KHKGSFETIHIQDALGHEFATRLGNVFTIG 164
G + G + ++ + K + D F T VF IG
Sbjct: 182 GSHTGEIATVRGHDVKRSSKANEVQFDD-----FLTIADYVFVIG 221
>gi|342905996|gb|AEL79281.1| ribosomal protein S4e [Rhodnius prolixus]
Length = 92
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRF 44
MQR + VD KVRTD YPAGFMDV++I KT E FRL+YD KGR+
Sbjct: 47 MQRLIKVDGKVRTDPNYPAGFMDVITIEKTGEFFRLIYDVKGRY 90
>gi|154150087|ref|YP_001403705.1| 30S ribosomal protein S4 [Methanoregula boonei 6A8]
gi|153998639|gb|ABS55062.1| Ribosomal protein S4E, central [Methanoregula boonei 6A8]
Length = 241
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q+ V+++ + D G DV+++P+ + FR+L D KGR + I E A+ +LCK+
Sbjct: 62 QKDVVINGRPVRDPKMGIGIFDVIALPRIGKYFRVLRDLKGRHKTVEIDAEAAQKRLCKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETN---KITEFIKFDVGNVVMV 118
+ G +N G I D K+ND++ + L+ KI E F GN+ +
Sbjct: 122 ENKTIVPGGKVQLNLRYGANI-IADNTYKSNDSVVISLKPEDRFKILEHYPFVAGNMATI 180
Query: 119 TGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHE-FATRLGNVFTIGKGT 167
GGR+ G+V I K GS + ++D E F T ++ IGK T
Sbjct: 181 IGGRHSGKVARIIEIIKTPGSVPNKVILEDEKTKERFDTITPYIYMIGKET 231
>gi|397780856|ref|YP_006545329.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
gi|396939358|emb|CCJ36613.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
Length = 244
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR VLV+ + + G D+VSIPK +++R+ D G I +E AK +LCK+
Sbjct: 62 QRDVLVNGRPCRNPQIGLGVFDIVSIPKLGKHYRIQLDKLGNLISVEIPEESAKTRLCKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNK-------ITEFIKFDVGN 114
R+ + G +N G I D KA D++ + L K I + F GN
Sbjct: 122 RNKTVIKGGRVQLNLAFGANI-LADNTYKAKDSVVVTLGDPKSGEDRFRIIDHFPFAEGN 180
Query: 115 VVMVTGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGK-GTKP 169
V M+ GG++ G+VG I + S + + D+ F T +F +G+ G P
Sbjct: 181 VAMIVGGKHSGKVGRIVEITRTASSVPNRVVLVDDSADERFETIEEYIFMVGRSGIAP 238
>gi|448489452|ref|ZP_21607675.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
gi|445694824|gb|ELZ46942.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
19288]
Length = 214
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LV+ +D+ P G D+++ P+ E FR+ D GR L + ++ A +L K+ +
Sbjct: 65 ILVNGDAISDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G+ + +DG +R D + ND+I +D ET +I +++ G +V G++
Sbjct: 125 TVVPGGVVQLTLHDGTNVRVDDDADYETNDSIVVDNETKEIVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
G++G I + + GS
Sbjct: 185 AGQIGEIDDIDVTLGS 200
>gi|379003364|ref|YP_005259036.1| 30S ribosomal protein S4E [Pyrobaculum oguniense TE7]
gi|375158817|gb|AFA38429.1| Ribosomal protein S4E [Pyrobaculum oguniense TE7]
Length = 238
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD VR D +P G MDV+ I T E +R++ D + L SI EA KL +V
Sbjct: 65 YIKVDGVVRKDYRFPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLSIPSSEASLKLLRVEG 124
Query: 64 VQFGQKGIPYINTYDGRT-IRYPD--PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
G ++ +DGR I PD IK DTI DLE I I +G + +VT
Sbjct: 125 KTTVNGGRLQLHFHDGRNLITSPDMGAKIKTFDTILYDLENKSIKTHIPMKLGVMAVVTH 184
Query: 121 GRNRGRVG 128
G N G G
Sbjct: 185 GSNVGFSG 192
>gi|119872074|ref|YP_930081.1| 30S ribosomal protein S4 [Pyrobaculum islandicum DSM 4184]
gi|189045359|sp|A1RS06.1|RS4E_PYRIL RecName: Full=30S ribosomal protein S4e
gi|119673482|gb|ABL87738.1| SSU ribosomal protein S4E [Pyrobaculum islandicum DSM 4184]
Length = 238
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V +D +R D +P G MDVV I T E +R++ D K + L I EEA KL +V
Sbjct: 65 YVKIDGVIRKDYKFPVGLMDVVEIVPTGEIYRVVPDEKKYYALIPISSEEATLKLLRVEG 124
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ G ++ +DGR + + IK DT+ DL+ I I F +G +VT
Sbjct: 125 KTAVKGGKLQLHFHDGRNLIVSQDVGRHIKTFDTVLYDLQNKNIKMHIPFKLGAYAVVTR 184
Query: 121 GRNRGRVG 128
G N G G
Sbjct: 185 GGNVGFSG 192
>gi|354610525|ref|ZP_09028481.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
gi|353195345|gb|EHB60847.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
Length = 233
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ D P G D+++ P +E +R+ D GR L I + A KL KV
Sbjct: 65 VLVNGASVGDVKRPIGMFDILAFPARDEYYRVFPDEGGRLGLTPIEADAADSKLNKVEDK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
G +N +DG + D +D++ ++ ETN+I +++ G +V G++
Sbjct: 125 TTVSGGQTQLNFHDGTNLLVEDDSYSGSDSVVVENETNEIVAHFEYEEGALVTAVAGQHA 184
Query: 125 GRVGIIKNREKHKGSFE 141
G +G +++ GS E
Sbjct: 185 GEIGTVEDITVQPGSAE 201
>gi|448730389|ref|ZP_21712697.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
gi|445793557|gb|EMA44129.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
Length = 265
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VLV+ D+ P G D++ + NE++R+ D GR L +I ++A KL K+
Sbjct: 62 QGSVLVNGDALDDEERPIGMFDILEFDERNEHYRVFPDEGGRLALTTIDADDADSKLGKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKA-NDTIKLDLETNKITEFIKFDVGNVVMVTG 120
Q G + +DGRT+ D A +D+I +D E ++I ++ G +V
Sbjct: 122 EGKQQVSGGATQLALHDGRTLEVDDASEYAGSDSIVVD-EDDEILAHFSYEEGALVTAVE 180
Query: 121 GRNRGRVGIIKNREKHKGS 139
GR+ G VG I + + GS
Sbjct: 181 GRHAGEVGEIDDIQVTPGS 199
>gi|413920916|gb|AFW60848.1| hypothetical protein ZEAMMB73_467708 [Zea mays]
Length = 456
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 107 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
F++FDVGNVVMVTGGRN G VG+IKN EKHKG FE
Sbjct: 405 FLQFDVGNVVMVTGGRNTGCVGVIKNWEKHKGIFE 439
>gi|227115798|ref|ZP_03829454.1| hypothetical protein PcarbP_22726 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 37
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 85 PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
PDPLIK NDT+++DLET KIT+FIKFD GN+ MVTGG
Sbjct: 1 PDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGG 37
>gi|88603487|ref|YP_503665.1| 30S ribosomal protein S4 [Methanospirillum hungatei JF-1]
gi|121731773|sp|Q2FT37.1|RS4E_METHJ RecName: Full=30S ribosomal protein S4e
gi|88188949|gb|ABD41946.1| SSU ribosomal protein S4E [Methanospirillum hungatei JF-1]
Length = 241
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
+R ++V+ + G D+VSIPK+ +++R+L D KGR I ++ A +L K+
Sbjct: 62 EREIIVNGRPVRHPDMGIGIFDIVSIPKSGKHYRILRDKKGRHVTIPIDEDAASSRLVKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL---ETNKITEFIKFDVGNVVMV 118
+ + G +N DG + D K+ D+I L L + N+I + F GN+ M+
Sbjct: 122 TNKTIVKGGRIQLNLRDGSNV-LTDKQYKSGDSIVLSLKEGQKNEIIDHFPFQPGNMAMI 180
Query: 119 TGGRNRGRVGIIKNREKHKGSF--ETIHIQDALGHEFATRLGNVFTIGK 165
GG++ G VG I GS I ++ G F T V +G+
Sbjct: 181 IGGKHSGVVGRIIEHIPVPGSLPNRVILKDESSGESFETIDEYVVMVGR 229
>gi|145591931|ref|YP_001153933.1| 30S ribosomal protein S4 [Pyrobaculum arsenaticum DSM 13514]
gi|189045357|sp|A4WLL4.1|RS4E_PYRAR RecName: Full=30S ribosomal protein S4e
gi|145283699|gb|ABP51281.1| SSU ribosomal protein S4E [Pyrobaculum arsenaticum DSM 13514]
Length = 238
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD VR D +P G MDV+ I T E +R++ D + L I EA KL +V
Sbjct: 65 YIKVDGVVRKDYRFPVGLMDVIEIVPTGEVYRVVPDQDRYYNLLPIPSSEASLKLLRVEG 124
Query: 64 VQFGQKGIPYINTYDGRT-IRYPD--PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
G ++ +DGR I PD IK DTI DLE I I +G V +VT
Sbjct: 125 KTTVNGGRLQLHFHDGRNLITSPDMGAKIKTFDTILYDLENKTIKTHIPMKLGVVAVVTH 184
Query: 121 GRNRGRVG 128
G N G G
Sbjct: 185 GSNVGFSG 192
>gi|257053371|ref|YP_003131204.1| 30S ribosomal protein S4e [Halorhabdus utahensis DSM 12940]
gi|256692134|gb|ACV12471.1| Ribosomal protein S4E, central domain protein [Halorhabdus
utahensis DSM 12940]
Length = 286
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VL++ +D+T P G D+++ + E +R+ GR L I ++ A+ KL K+
Sbjct: 62 QDQVLINGDPESDETRPVGMFDILAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLGKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYP-DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
QF G + +DG T+ D + ND++ ++ ++ +I +++ G +V
Sbjct: 122 VGKQFVPGGDLQLTLHDGETLLVSEDAPYEGNDSVVVENDSEEIVAHFEYEEGALVTAVD 181
Query: 121 GRNRGRVGIIKNREKHKGSFE 141
G++ G +G I+ + GS E
Sbjct: 182 GQHAGEIGTIEEIQVTPGSAE 202
>gi|126460352|ref|YP_001056630.1| 30S ribosomal protein S4 [Pyrobaculum calidifontis JCM 11548]
gi|189045358|sp|A3MWZ7.1|RS4E_PYRCJ RecName: Full=30S ribosomal protein S4e
gi|126250073|gb|ABO09164.1| SSU ribosomal protein S4E [Pyrobaculum calidifontis JCM 11548]
Length = 237
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD VR D +P G MDVV I T E +R++ D + L I EA K +V
Sbjct: 65 YIKVDGVVRKDYKFPIGLMDVVEIVPTGEIYRVVPDEAKYYDLKPIPSSEAALKPLRVEG 124
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
G ++ +DGR + P + IK DT+ DLE I + +G + +VT
Sbjct: 125 KTAVSGGRIQLHFHDGRNLILPPDVGRQIKTFDTVVYDLENKAIKTHLPLRLGQLAVVTH 184
Query: 121 GRNRGRVG 128
G N G VG
Sbjct: 185 GGNIGFVG 192
>gi|335437500|ref|ZP_08560276.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|335438897|ref|ZP_08561628.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334890168|gb|EGM28442.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
gi|334895848|gb|EGM34011.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
Length = 277
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VL++ +D+T P G D+++ + E +R+ GR L I ++ A+ KL K+
Sbjct: 62 QDQVLINGDPESDETRPVGMFDILAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLGKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYP-DPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
QF G + +DG T+ D + ND+I ++ ++ ++ +++ G +V
Sbjct: 122 VQKQFVPGGDLQLTLHDGETLLVSEDAPYEGNDSIVVENDSEEVIAHFEYEEGALVTAVD 181
Query: 121 GRNRGRVGIIKNREKHKGSFE 141
G++ G +G I+ + GS E
Sbjct: 182 GQHAGEIGTIEEIQVTPGSAE 202
>gi|413920697|gb|AFW60629.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 872
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 107 FIKFDVGNVVMVTGGRNRGRVGIIKNREKHKGSFE 141
+++FDVGNVVMVTGGRN GRVG+IKN EKHKG FE
Sbjct: 818 YLQFDVGNVVMVTGGRNTGRVGVIKNWEKHKGIFE 852
>gi|48477724|ref|YP_023430.1| 30S ribosomal protein S4e [Picrophilus torridus DSM 9790]
gi|73918003|sp|Q6L1B5.1|RS4E_PICTO RecName: Full=30S ribosomal protein S4e
gi|48430372|gb|AAT43237.1| small subunit ribosomal protein S4E [Picrophilus torridus DSM 9790]
Length = 234
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V+VD KV ++ GFMD +++ + ++ + YD KG+ + E KL +V+
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTV--SGNDYLVSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
+ + G I+ +DG T+ IK D++ + + +I + +KF GN V +TGG +
Sbjct: 124 TYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHV 183
Query: 125 GRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIG 164
G + IK+ E S E +H+ + F+T VF +G
Sbjct: 184 GEIATIKSIEIKSSSGENMVHMNEG----FSTVSSYVFVMG 220
>gi|374326782|ref|YP_005084982.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
gi|356642051|gb|AET32730.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
Length = 238
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V VD VR D +P G MDVV I T E +R++ D++ + L I EE+ KL +V
Sbjct: 65 YVKVDGVVRRDYKFPVGLMDVVEIVPTGEVYRVVPDSEKYYNLLPIPSEESSMKLLRVEG 124
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ G ++ +DGR + L IK D++ DL+ I I +G V+
Sbjct: 125 KTAVKGGKLQLHFHDGRNLITTPELGRQIKTFDSVLYDLQNKSIKMHIPLKLGVNVLAIH 184
Query: 121 GRNRGRVGII 130
G N G G++
Sbjct: 185 GSNVGFAGVL 194
>gi|448735123|ref|ZP_21717340.1| 30S ribosomal protein S4e [Halococcus salifodinae DSM 8989]
gi|445798736|gb|EMA49127.1| 30S ribosomal protein S4e [Halococcus salifodinae DSM 8989]
Length = 264
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VLV+ D+ P G D++ + NE++R+ D GR L +I ++A KL K+
Sbjct: 53 QGSVLVNGDTLDDEERPIGMFDILEFVERNEHYRVFPDEGGRLALTTIDADDADSKLGKI 112
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKA-NDTIKLDLETNKITEFIKFDVGNVVMVTG 120
Q G + +DGRT+ D A +D+I +D E ++I ++ G +V
Sbjct: 113 EGKQQVPGGATQLALHDGRTLEIDDASEYAGSDSIVVD-EDDEILAHFPYEEGALVTAVE 171
Query: 121 GRNRGRVGIIKNREKHKGS 139
GR+ G +G I + + GS
Sbjct: 172 GRHAGEIGEIDDIQVTPGS 190
>gi|448386101|ref|ZP_21564309.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
gi|445655999|gb|ELZ08841.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
Length = 232
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L++ D+ P G D+V+ P E +R+ D GR L I +E A+ +L K+
Sbjct: 65 ILINGDAINDEQRPIGMFDIVAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLGKIEGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
Q G + +DG + D +AND+I +D + I ++ G +V G +
Sbjct: 125 QQVPGGDTQLTLHDGTNVLVDDDEYQANDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHG 184
Query: 125 GRVGIIKNREKHKGS 139
G++G + + GS
Sbjct: 185 GKIGEVDAIDVTPGS 199
>gi|15790644|ref|NP_280468.1| 30S ribosomal protein S4 [Halobacterium sp. NRC-1]
gi|169236383|ref|YP_001689583.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
gi|17368985|sp|Q9HPC2.1|RS4E_HALSA RecName: Full=30S ribosomal protein S4e
gi|226697782|sp|B0R668.1|RS4E_HALS3 RecName: Full=30S ribosomal protein S4e
gi|10581171|gb|AAG19948.1| 30S ribosomal protein S4E [Halobacterium sp. NRC-1]
gi|167727449|emb|CAP14237.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
Length = 233
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ D P G D+++ P +E +R+ D GR L I + A KL KV
Sbjct: 65 VLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
G +N +DG + + D++ +D +TN+I +++ G +V G++
Sbjct: 125 TTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHA 184
Query: 125 GRVGIIKNREKHKGSFE-TIHIQDALG 150
G +G I GS T+ + D G
Sbjct: 185 GDIGEIAEINVQPGSASNTVRVDDENG 211
>gi|193083743|gb|ACF09430.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 231
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R V+VD ++ TD G MDV+++ N+R + DT G+ R I +A K+C+V
Sbjct: 64 SRQVMVDGRIETDGGRGVGLMDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCRV 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ ++ +DGR + D K+ DT+ + L I+ F G V +TG
Sbjct: 122 MGKTTLRGSKSQLHLHDGRNLIMDDASAYKSGDTVVISLPEQDISAHHPFGDGATVYLTG 181
Query: 121 GRNRGRVGIIKNREKHKGS 139
G + G + ++ + + S
Sbjct: 182 GSHIGEIVTVRGHDVKRSS 200
>gi|171186001|ref|YP_001794920.1| 30S ribosomal protein S4e [Pyrobaculum neutrophilum V24Sta]
gi|226697784|sp|B1Y9S4.1|RS4E_THENV RecName: Full=30S ribosomal protein S4e
gi|170935213|gb|ACB40474.1| Ribosomal protein S4E, central domain protein [Pyrobaculum
neutrophilum V24Sta]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
++ VD VR + +P G MDVV I T E +R++ D + + L I EEA KL +V
Sbjct: 65 YIKVDGVVRRNYKFPVGLMDVVEIVPTGEIYRVVPDERSYYALVPITSEEADLKLLRVEG 124
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPL---IKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ G ++ +DGR + P IK D++ DL+ + I +G +VT
Sbjct: 125 KTAVKGGRLQVHFHDGRNLIMPAETARQIKTFDSVLYDLKARTVRSHIPMRLGVYAVVTH 184
Query: 121 GRNRG 125
G N G
Sbjct: 185 GGNVG 189
>gi|409731012|ref|ZP_11272562.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|448724770|ref|ZP_21707275.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
gi|445784979|gb|EMA35775.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
Length = 253
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VLV+ + +D+ P G D+V + +E++R+ D GR L I +A KL K+
Sbjct: 62 QGSVLVNNETLSDEQRPIGMFDIVEFAERDEHYRVFPDEGGRLALTPIDAADADSKLGKI 121
Query: 62 RSVQFGQKGIPYINT----YDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVM 117
G++ +P NT +DGRT+ + ND+I +D + N+I ++ G +V
Sbjct: 122 E----GKRQVPGGNTQLSLHDGRTLEIDEGDYAGNDSIVVDTD-NEILAHFPYEEGALVT 176
Query: 118 VTGGRNRGRVGIIKNREKHKGS 139
G++ G +G I + GS
Sbjct: 177 AVRGQHAGEIGEIDEIQVTPGS 198
>gi|193084304|gb|ACF09963.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 221
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
R V+VD ++ TD G MDV+++ N+R + DT G+ R I +A K+C+V
Sbjct: 54 SRQVMVDGRIETDGGRGVGLMDVLTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCRV 111
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPD-PLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ ++ +DGR + D K+ DT+ + L I+ F G V +TG
Sbjct: 112 MGKTTLRGSKSQLHFHDGRNLIMDDTSAYKSGDTVVISLPEQDISAHHPFGDGATVYLTG 171
Query: 121 GRNRGRVGIIKNREKHKGS 139
G + G + ++ + + S
Sbjct: 172 GSHIGEIVTVRGHDVKRSS 190
>gi|257076572|ref|ZP_05570933.1| 30S ribosomal protein S4e [Ferroplasma acidarmanus fer1]
Length = 240
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
V VD ++ D+ +P GFMDV+SI ++ ++YD KG+ + KL KV
Sbjct: 66 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKK 125
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
G + +DG+TI I +D + + + +I +K G+ V +TGG +
Sbjct: 126 TIIGTGKIQLGFHDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHV 185
Query: 125 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG 164
G + IK+ E K S + + L F+T +F +G
Sbjct: 186 GELATIKSIEVKKSSVKNMV---YLNEGFSTIKDYMFVVG 222
>gi|448475298|ref|ZP_21603016.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
gi|445816769|gb|EMA66656.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
Length = 241
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ +D+ P G D+V+ P+ E FR+ D GR L + ++ A +L K+ +
Sbjct: 65 VLVNGDAISDEQRPIGMFDIVAFPERGEFFRVFPDEGGRLALTPVDEDAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G + +DG +R D D+I +D E+ ++ +++ G +V G++
Sbjct: 125 AVVPGGDVQLTLHDGTNVRVDADTPYDTKDSIIIDNESKEVVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
GR+G + + + GS
Sbjct: 185 AGRIGEVDDIDVTLGS 200
>gi|448377818|ref|ZP_21560514.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
gi|445655762|gb|ELZ08607.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
Length = 244
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ +D+ P G D+++ P E +R+ D GR L I E A+ +L KV
Sbjct: 65 VLVNGDEISDEERPIGMFDILAFPDREEAYRVFPDEGGRLSLTPIDAESAESRLGKVEGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKA-NDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G+ ++ +DG + D ND++ +D E+ +I ++ G +V G +
Sbjct: 125 RQVTGGVTQLSLHDGTNVTVDDEATYGVNDSVVVDNESKEIVAHFPYEDGALVTAVRGNH 184
Query: 124 RGRVGIIKNREKHKGSFETI 143
G++G I + GS I
Sbjct: 185 AGKIGQIAEIDVTPGSGSNI 204
>gi|345005643|ref|YP_004808496.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
gi|344321269|gb|AEN06123.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
Length = 234
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VLV+ D+ P G D+++ P E FR+ GR L I +E +L K+
Sbjct: 62 QDAVLVNGDAIADEARPIGMFDILAFPSREEFFRVFPGEGGRLALTPIDEESGSSRLGKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
Q G + +DG T + D AND++ +D ET I ++ G +V
Sbjct: 122 TGKQQVSGGDFQLTLHDGTTTQVEDASDYSANDSLVVDNETKDIVAHFTYEEGALVTAVN 181
Query: 121 GRNRGRVGIIKN 132
G++ G +G I +
Sbjct: 182 GQHAGEIGEIDD 193
>gi|222480845|ref|YP_002567082.1| 30S ribosomal protein S4e [Halorubrum lacusprofundi ATCC 49239]
gi|254764559|sp|B9LSR5.1|RS4E_HALLT RecName: Full=30S ribosomal protein S4e
gi|222453747|gb|ACM58012.1| Ribosomal protein S4E, central domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 240
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ +D+ P G D+++ P+ E FR+ D GR L S+ +E A +L K+ +
Sbjct: 65 VLVNGDAISDEQRPIGMFDILAFPERGEFFRVFPDEGGRLALTSVDEEAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G + +DG + D D+I +D E+ + +++ G +V G++
Sbjct: 125 SVVPGGDAQLTLHDGTNVLVDADTEYDTKDSIVVDNESKDVVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
GR+G + + + GS
Sbjct: 185 AGRIGEVADIDVTLGS 200
>gi|110668729|ref|YP_658540.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
gi|109626476|emb|CAJ52937.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
Length = 265
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR VLV+ V +D+ P G D+++ + E +R+ + GR L I +A +L K+
Sbjct: 62 QRSVLVNGDVVSDEQRPVGLFDILAFTEREEYYRVFPEAGGRLALTPIDISDANSRLGKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRY-PDPLIKAN--DTIKLDLETNKITEFIKFDVGNVVMV 118
+ Q G + +DG IR D + N D++ +D ET +I ++ G +V
Sbjct: 122 INKQQVSGGAIQLTLHDGANIRVNADEIDTYNPRDSLVIDNETKEIVAHFPYEEGALVTA 181
Query: 119 TGGRNRGRVGIIKNREKHKGSFE 141
G++ G +G I+ GS E
Sbjct: 182 VSGKHSGEIGEIETITVTAGSSE 204
>gi|433590206|ref|YP_007279702.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|448332388|ref|ZP_21521632.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
gi|433304986|gb|AGB30798.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
gi|445627492|gb|ELY80816.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
Length = 232
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+L++ D+ P G D+V+ P E +R+ D GR L I +E A+ +L K+
Sbjct: 65 ILINGDAINDEQRPIGMFDIVAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLGKIEGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
Q G + +DG + D +A D+I +D + I ++ G +V G +
Sbjct: 125 QQVPGGDTQLTLHDGTNVLVDDDEYQAKDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHG 184
Query: 125 GRVGIIKNREKHKGS 139
G++G + + GS
Sbjct: 185 GKIGEVDAIDVTPGS 199
>gi|385804229|ref|YP_005840629.1| 30S ribosomal protein S4 [Haloquadratum walsbyi C23]
gi|339729721|emb|CCC40999.1| 30S ribosomal protein S4e [Haloquadratum walsbyi C23]
Length = 265
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR VLV+ V +D+ P G D+++ + E +R+ + GR L I +A +L K+
Sbjct: 62 QRSVLVNGDVVSDEQRPVGLFDILAFTEREEYYRVFPEAGGRLALTPIDISDANSRLGKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRY-PDPLIKAN--DTIKLDLETNKITEFIKFDVGNVVMV 118
+ Q G + +DG IR D + N D++ +D ET +I ++ G +V
Sbjct: 122 INKQQVSGGAIQLTLHDGANIRVNADEIDTYNPRDSLVIDNETKEIVAHFPYEEGALVTA 181
Query: 119 TGGRNRGRVGIIKNREKHKGSFE 141
G++ G +G I+ GS E
Sbjct: 182 VSGKHSGEIGEIETITVTAGSSE 204
>gi|429190332|ref|YP_007176010.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|448326244|ref|ZP_21515611.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
gi|429134550|gb|AFZ71561.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
gi|445612901|gb|ELY66618.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
Length = 243
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LV+ + D+ P G D+V+ P E +R+ D GR L I + A+ +L K+ S
Sbjct: 65 ILVNGEPINDEQRPIGIFDIVAFPGREEYYRVFPDEGGRLSLTGIDADSAESRLGKIESK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNR 124
Q G + +DG + D D+I +D + I ++ G +V G +
Sbjct: 125 QQVSGGDTQLTLHDGTNVIADDDGYSTTDSIVVDNDDKSIVAHFPYEEGALVTAVRGNHG 184
Query: 125 GRVGIIKNREKHKGS 139
G++G I++ E GS
Sbjct: 185 GKIGEIESIEVTPGS 199
>gi|448415407|ref|ZP_21578207.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
gi|445681065|gb|ELZ33506.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
Length = 252
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VLV+ +D++ P G D+++ + E FR+ D GR L I E A +L KV
Sbjct: 62 QDTVLVNGDAVSDESRPIGMFDILAFTEREEYFRVFPDEGGRLALTPIDAESADSRLGKV 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDP----LIKANDTIKLDLETNKITEFIKFDVGNVVM 117
Q + G + +DG +R D + D++ +D ET +I ++ G +V
Sbjct: 122 AGKQSVKGGATQLTLHDGSNVRVEDEDDPDQYHSKDSLVVDNETKEIVAHFPYEEGALVT 181
Query: 118 VTGGRNRGRVGII 130
G + G +G +
Sbjct: 182 AVDGTHAGEIGEV 194
>gi|448460065|ref|ZP_21596985.1| 30S ribosomal protein S4e [Halorubrum lipolyticum DSM 21995]
gi|445807783|gb|EMA57864.1| 30S ribosomal protein S4e [Halorubrum lipolyticum DSM 21995]
Length = 241
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ +D+ P G D+++ P+ E FR+ D GR L + +E A +L K+ +
Sbjct: 65 VLVNGDAISDEQRPIGMFDILAFPERGEFFRVFPDEGGRLALTPVDEEAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G + +DG + D D+I +D E+ +I +++ G +V G++
Sbjct: 125 SVVPGGDAQLTLHDGTNVLVDADTEYDTKDSIVVDNESKEIVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
GR+G + + + GS
Sbjct: 185 AGRIGEVADIDVTLGS 200
>gi|452206436|ref|YP_007486558.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
gi|452082536|emb|CCQ35794.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
Length = 269
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
Q VLV+ K +D+ P G D+++ + E +R+ D GR L I E A KL K+
Sbjct: 62 QDSVLVNGKAVSDERQPIGMFDILAFREREEYYRVFPDEGGRLSLTPIDAESAGSKLGKI 121
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
G + +DG+T+ D ND+I + + +I ++ G +V
Sbjct: 122 VGKAQVPGGDTQLTLHDGQTLLVEDATTYDGNDSIVVSNDAEEIVAHFTYEKGALVTAVS 181
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHE 152
G + GR+G I + GS + +A G E
Sbjct: 182 GAHAGRIGTIDEIQVTPGSSPNNVLIEAAGGE 213
>gi|448441437|ref|ZP_21589100.1| 30S ribosomal protein S4e [Halorubrum saccharovorum DSM 1137]
gi|445688846|gb|ELZ41093.1| 30S ribosomal protein S4e [Halorubrum saccharovorum DSM 1137]
Length = 241
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ +D+ P G D+++ P+ E FR+ D GR L + +E A +L K+ +
Sbjct: 65 VLVNGDAVSDEQRPIGMFDILAFPERGEFFRVFPDEGGRLALTPVDEEAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPL-IKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G + +DG + D D+I +D E+ +I +++ G +V G++
Sbjct: 125 SVVPGGDVQLTLHDGTNVLVDDDAEYDTKDSIVVDNESKEIVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
GR+G + + + GS
Sbjct: 185 AGRIGEVADIDVTLGS 200
>gi|149023117|gb|EDL80011.1| rCG27353 [Rattus norvegicus]
Length = 62
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 117 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKG 176
MVTGG N GR+G+I NRE+H GSF+ +++ ++ + N+ I KG KP + PK
Sbjct: 1 MVTGGANLGRIGVIANRERHPGSFDMVYVNESCQCQQLYHSANISVICKGNKPQILFPKE 60
Query: 177 K 177
K
Sbjct: 61 K 61
>gi|18313980|ref|NP_560647.1| 30S ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
gi|23822150|sp|Q8ZTD3.1|RS4E_PYRAE RecName: Full=30S ribosomal protein S4e
gi|18161555|gb|AAL64829.1| ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
Length = 238
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V VD VR D +P G MDV+ I T E +R++ D + L I EEA KL +V
Sbjct: 65 YVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEG 124
Query: 64 VQFGQKGIPYINTYDGR---TIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
+ G ++ +DGR T IK D++ DL I I +G +V
Sbjct: 125 KTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIH 184
Query: 121 GRNRGRVGII 130
G N G G +
Sbjct: 185 GSNVGFSGTL 194
>gi|448426495|ref|ZP_21583344.1| 30S ribosomal protein S4e [Halorubrum terrestre JCM 10247]
gi|448484346|ref|ZP_21606053.1| 30S ribosomal protein S4e [Halorubrum arcis JCM 13916]
gi|448508616|ref|ZP_21615567.1| 30S ribosomal protein S4e [Halorubrum distributum JCM 9100]
gi|448517701|ref|ZP_21617275.1| 30S ribosomal protein S4e [Halorubrum distributum JCM 10118]
gi|445679375|gb|ELZ31842.1| 30S ribosomal protein S4e [Halorubrum terrestre JCM 10247]
gi|445697242|gb|ELZ49312.1| 30S ribosomal protein S4e [Halorubrum distributum JCM 9100]
gi|445705916|gb|ELZ57804.1| 30S ribosomal protein S4e [Halorubrum distributum JCM 10118]
gi|445820121|gb|EMA69950.1| 30S ribosomal protein S4e [Halorubrum arcis JCM 13916]
Length = 241
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LV+ +D+ P G D+++ P+ E FR+ D GR L S+ ++ A +L K+ +
Sbjct: 65 ILVNGDAVSDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTSVDEDAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G+ + +DG +R D ND+I +D ET +I +++ G +V G++
Sbjct: 125 SVVPGGVVQLTLHDGTNVRVDDDADYDTNDSIVVDNETKEIVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
G +G I + + GS
Sbjct: 185 AGHIGEIDDIDVTLGS 200
>gi|448463242|ref|ZP_21598020.1| 30S ribosomal protein S4e [Halorubrum kocurii JCM 14978]
gi|445817237|gb|EMA67113.1| 30S ribosomal protein S4e [Halorubrum kocurii JCM 14978]
Length = 241
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ +D+ P G D+++ P+ E FR+ D GR L + +E A +L K+ +
Sbjct: 65 VLVNGDAISDEQRPIGMFDILAFPERGEFFRVFPDEGGRLALTPVDEEAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G + +DG + D D+I +D E+ ++ +++ G +V G++
Sbjct: 125 SVVPGGDVQLTLHDGTNVLVDADAEYDTKDSIVVDNESKEVVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
GR+G + + + GS
Sbjct: 185 AGRIGEVADIDVTLGS 200
>gi|448436264|ref|ZP_21587065.1| 30S ribosomal protein S4e [Halorubrum tebenquichense DSM 14210]
gi|448535696|ref|ZP_21622216.1| 30S ribosomal protein S4e [Halorubrum hochstenium ATCC 700873]
gi|445682932|gb|ELZ35342.1| 30S ribosomal protein S4e [Halorubrum tebenquichense DSM 14210]
gi|445703197|gb|ELZ55132.1| 30S ribosomal protein S4e [Halorubrum hochstenium ATCC 700873]
Length = 239
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
+LV+ +D+ P G D+++ P+ E FR+ D GR L + +E A +L K+ +
Sbjct: 65 ILVNGDAISDEQRPIGMFDILAFPERGEYFRVFPDEGGRLALTPVDEEAAGSRLGKITNK 124
Query: 65 QFGQKGIPYINTYDGRTIRY-PDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G+ + +DG +R D ND+I +D ET +I +++ G +V G++
Sbjct: 125 TVVPGGVVQLTLHDGTNVRVDDDADYDTNDSIVVDNETKEIVAHFEYEEGALVTAVAGQH 184
Query: 124 RGRVGIIKNREKHKGS 139
G++G I + + GS
Sbjct: 185 AGQIGEIDDIDVTLGS 200
>gi|433638921|ref|YP_007284681.1| ribosomal protein S4E [Halovivax ruber XH-70]
gi|433290725|gb|AGB16548.1| ribosomal protein S4E [Halovivax ruber XH-70]
Length = 254
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 5 VLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSV 64
VLV+ +D+ P G D+++ P E +R+ D GR L I E A+ +L KV
Sbjct: 65 VLVNGDEISDEERPIGMFDILAFPDREEAYRVFPDEGGRLSLTPIDAESAESRLGKVEGK 124
Query: 65 QFGQKGIPYINTYDGRTIRYPDPLI-KANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
+ G+ ++ +DG + D ND++ +D E+ +I ++ +V G +
Sbjct: 125 RQVTGGVTQLSLHDGTNVTVDDEATYGVNDSVVVDNESKEIVAHFPYEESALVTAVRGNH 184
Query: 124 RGRVGIIKNREKHKGSFETI 143
G++G + + GS I
Sbjct: 185 AGKIGQVAEIDVTPGSGSNI 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,078,912,862
Number of Sequences: 23463169
Number of extensions: 125918686
Number of successful extensions: 249226
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 247758
Number of HSP's gapped (non-prelim): 1131
length of query: 200
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 65
effective length of database: 9,191,667,552
effective search space: 597458390880
effective search space used: 597458390880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)