BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029041
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2
SV=2
Length = 262
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 246 LTIIEEARKR--LASQQAA 262
>sp|P49204|RS42_ARATH 40S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2
SV=4
Length = 262
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/199 (90%), Positives = 189/199 (94%), Gaps = 2/199 (1%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIEEARKR LA+ AA
Sbjct: 246 LTIIEEARKR--LASQQAA 262
>sp|P46300|RS4_SOLTU 40S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1
Length = 264
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/199 (88%), Positives = 190/199 (95%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V+VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCK
Sbjct: 66 MQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKRQALATSAAA 199
L+IIE+ARKR A ++ A
Sbjct: 246 LTIIEDARKRLAAQSATPA 264
>sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2
SV=1
Length = 261
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/190 (92%), Positives = 184/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+ VD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLE NKI EFIKFDVGNVVMVTG
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKGTKPWVSLPKGKGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
L+IIEEARKR
Sbjct: 246 LTIIEEARKR 255
>sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 SV=1
Length = 265
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/190 (90%), Positives = 184/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKTNEN+RLLYDTKGRFRLH IRDE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1
Length = 262
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/197 (88%), Positives = 185/197 (93%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV+VD KVRTDKTYPAGFMDVVSIPKTNE+FRLLYDTKGRF LH+I +E KFKLCK
Sbjct: 66 MQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE+NKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK KGIK
Sbjct: 186 GRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIK 245
Query: 181 LSIIEEARKRQALATSA 197
LSIIEEARKR A +A
Sbjct: 246 LSIIEEARKRLAAQNAA 262
>sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4
PE=2 SV=3
Length = 265
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/190 (89%), Positives = 183/190 (96%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHVLVD KVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCK
Sbjct: 66 MQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPY+NTYDGRTIRYPDP+IKANDTIK+DLETNKI +FIKFDVGNVVMVTG
Sbjct: 126 VRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG+IKNREKHKGSFETIH++DALGH+FATRLGNVFTIGKG KPWVSLPKGKGIK
Sbjct: 186 GRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIK 245
Query: 181 LSIIEEARKR 190
LSIIEE RKR
Sbjct: 246 LSIIEEQRKR 255
>sp|O81363|RS4_PRUAR 40S ribosomal protein S4 OS=Prunus armeniaca GN=RPS4 PE=2 SV=1
Length = 261
Score = 347 bits (891), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/190 (88%), Positives = 178/190 (93%), Gaps = 4/190 (2%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRH+LVD K+ + DVVSIPKTNENFRLLYDTKGRFRLHSIRDEE+KFKLCK
Sbjct: 66 MQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESKFKLCK 121
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKIT+FIKFDVGNVVMVTG
Sbjct: 122 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNVVMVTG 181
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPKGKGIK
Sbjct: 182 GRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 241
Query: 181 LSIIEEARKR 190
L+I+EEA+KR
Sbjct: 242 LTILEEAKKR 251
>sp|P47961|RS4_CRIGR 40S ribosomal protein S4 OS=Cricetulus griseus GN=RPS4 PE=2 SV=2
Length = 263
Score = 285 bits (729), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P79103|RS4_BOVIN 40S ribosomal protein S4 OS=Bos taurus GN=RPS4 PE=2 SV=3
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P62703|RS4X_RAT 40S ribosomal protein S4, X isoform OS=Rattus norvegicus GN=Rps4x
PE=2 SV=2
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P62702|RS4X_MOUSE 40S ribosomal protein S4, X isoform OS=Mus musculus GN=Rps4x PE=2
SV=2
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P62704|RS4X_MESAU 40S ribosomal protein S4, X isoform OS=Mesocricetus auratus
GN=RPS4X PE=2 SV=2
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|Q76MY1|RS4X_MACFU 40S ribosomal protein S4, X isoform OS=Macaca fuscata fuscata
GN=RPS4X PE=2 SV=3
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P62701|RS4X_HUMAN 40S ribosomal protein S4, X isoform OS=Homo sapiens GN=RPS4X PE=1
SV=2
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P62705|RS4X_FELCA 40S ribosomal protein S4, X isoform OS=Felis catus GN=RPS4X PE=2
SV=2
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|Q76N24|RS4X_CHLAE 40S ribosomal protein S4, X isoform OS=Chlorocebus aethiops
GN=RPS4X PE=2 SV=3
Length = 263
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|Q642H9|RS4X_DANRE 40S ribosomal protein S4, X isoform OS=Danio rerio GN=rps4x PE=2
SV=3
Length = 263
Score = 283 bits (724), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDVVSI KT ENFRL+YD KGRF +H I +EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKF+ GN+ MVTG
Sbjct: 126 VRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++D++G+ FATRL N+F IGKG KPWVSLP+GKG++
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S++
Sbjct: 246 LTIAEERDKRLAAKQSSS 263
>sp|Q90YS0|RS4_ICTPU 40S ribosomal protein S4 OS=Ictalurus punctatus GN=rps4 PE=2 SV=3
Length = 263
Score = 283 bits (723), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 161/198 (81%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD TYPAGFMDV+SI KT ENFRL+YD KGRF +H I +EEAK+KLCK
Sbjct: 66 MQRFIKVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ + G KGIP++ T+D RTIRYPDP+IKANDT+++DLET KITEFIKFD GN+ MVTG
Sbjct: 126 VKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++D+ G+ FATRL N+F IGKG K WVS+P+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S++
Sbjct: 246 LTIAEERDKRLAAKQSSS 263
>sp|P49401|RS4_XENLA 40S ribosomal protein S4 OS=Xenopus laevis GN=rps4 PE=2 SV=4
Length = 263
Score = 282 bits (722), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITSEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P47836|RS4_CHICK 40S ribosomal protein S4 OS=Gallus gallus GN=RPS4 PE=2 SV=2
Length = 263
Score = 282 bits (721), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 160/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|Q6PBC4|RS4_XENTR 40S ribosomal protein S4 OS=Xenopus tropicalis GN=rps4 PE=2 SV=3
Length = 263
Score = 282 bits (721), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|O62739|RS4Y1_MONDO 40S ribosomal protein S4, Y isoform 1 OS=Monodelphis domestica
GN=RPS4Y1 PE=2 SV=3
Length = 263
Score = 279 bits (713), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/198 (65%), Positives = 159/198 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + KGIP++ T+D RTIRYPDPLIK NDT++++LET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|O62738|RS4X_MONDO 40S ribosomal protein S4, X isoform OS=Monodelphis domestica
GN=RPS4X PE=2 SV=3
Length = 263
Score = 278 bits (710), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR G K IP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 126 VRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GR+G+I NREKH GSF+ +H++DA G+ FATRL N+F IGKG KPW+SLP+GKGI+
Sbjct: 186 GANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQA 192
L+I EE KR A
Sbjct: 246 LTIAEERDKRLA 257
>sp|Q9USW5|RS4B_SCHPO 40S ribosomal protein S4-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps4b PE=1 SV=1
Length = 262
Score = 276 bits (707), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIQVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTG
Sbjct: 126 VKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 186 GRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVK 245
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 246 LSITEERDRRRAL 258
>sp|P87158|RS4A_SCHPO 40S ribosomal protein S4-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps4a PE=2 SV=2
Length = 262
Score = 275 bits (704), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTG
Sbjct: 126 VKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 186 GRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVK 245
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 246 LSITEERDRRRAL 258
>sp|Q9P4W9|RS4C_SCHPO 40S ribosomal protein S4-C OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps4c PE=1 SV=1
Length = 262
Score = 275 bits (704), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 154/193 (79%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTG
Sbjct: 126 VKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+K
Sbjct: 186 GRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVK 245
Query: 181 LSIIEEARKRQAL 193
LSI EE +R+AL
Sbjct: 246 LSITEERDRRRAL 258
>sp|P41042|RS4_DROME 40S ribosomal protein S4 OS=Drosophila melanogaster GN=RpS4 PE=2
SV=2
Length = 261
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 157/195 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD TYPAG+MDV+++ KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ Q G KG+P++ T+DGRTIRYPDPLI AND++++D+ + KIT++IKFD GN+ M+TG
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FATRL NVF IGKG KP++SLPKGKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>sp|P79183|RS4Y1_MACFU 40S ribosomal protein S4, Y isoform 1 OS=Macaca fuscata fuscata
GN=RPS4Y1 PE=2 SV=3
Length = 263
Score = 273 bits (698), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 155/198 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL + KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|Q5UAP0|RS4_BOMMO 40S ribosomal protein S4 OS=Bombyx mori GN=RpS4 PE=2 SV=1
Length = 263
Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/199 (65%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T KI +FIKF+ GN+ M+TGG
Sbjct: 127 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK ++SLP+GKGI+L
Sbjct: 187 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
+I EE KR +A AAQ
Sbjct: 247 TIAEERDKR--IAAKVAAQ 263
>sp|Q6GVM7|RS4Y2_PANTR 40S ribosomal protein S4, Y isoform 2 OS=Pan troglodytes GN=RPS4Y2
PE=2 SV=3
Length = 263
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV G
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P22090|RS4Y1_HUMAN 40S ribosomal protein S4, Y isoform 1 OS=Homo sapiens GN=RPS4Y1
PE=1 SV=2
Length = 263
Score = 270 bits (689), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 246 LTVAEERDKRLATKQSSG 263
>sp|O59950|RS4_YARLI 40S ribosomal protein S4 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPS4 PE=2 SV=1
Length = 260
Score = 270 bits (689), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD T+PAGFMDV+ + KT ENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRLVKVDGKVRTDSTFPAGFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEAAYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KGIPY+ T+DGRTIRYPDPLIK NDT+K+DL T KIT F+KF+ GN+VM TG
Sbjct: 126 VKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG I +RE+H+G F+ +HI+DAL ++F TRL NVF IG+G K +SLPKGKGIK
Sbjct: 186 GRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE R+A
Sbjct: 246 LSIAEERDARRA 257
>sp|Q861U7|RS4Y1_PONPY 40S ribosomal protein S4, Y isoform 1 OS=Pongo pygmaeus GN=RPS4Y1
PE=3 SV=2
Length = 263
Score = 269 bits (687), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF + I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDITYPAGFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KI FIKFD GNV MV G
Sbjct: 126 VRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLATKQSSG 263
>sp|Q861U8|RS4Y1_GORGO 40S ribosomal protein S4, Y isoform 1 OS=Gorilla gorilla gorilla
GN=RPS4Y1 PE=3 SV=2
Length = 263
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 154/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ EE KR A S+
Sbjct: 246 LTVAEERDKRLATKQSSG 263
>sp|Q4PMB3|RS4_IXOSC 40S ribosomal protein S4 OS=Ixodes scapularis GN=RpS4 PE=2 SV=1
Length = 262
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 151/189 (79%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD YPAGFMDVV+I KT E FRLLYD KGRF LH I EEAK+KLC+V
Sbjct: 67 QRLIKVDGKVRTDTNYPAGFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL T KI ++IKFD GNV MVTGG
Sbjct: 127 KRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK TKP++SLP+GKGIKL
Sbjct: 187 HNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKL 246
Query: 182 SIIEEARKR 190
S+ EE +R
Sbjct: 247 SVAEERDRR 255
>sp|Q95V34|RS4_SPOFR 40S ribosomal protein S4 OS=Spodoptera frugiperda GN=RpS4 PE=2 SV=1
Length = 263
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV
Sbjct: 67 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTVHRITPEEAKYKLCKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ V G K +P++ T+DGRTIRYPDPLIK ND+++LD+ T+KI +FIKF+ GN+ M+TGG
Sbjct: 127 KRVSTGPKNVPFLVTHDGRTIRYPDPLIKVNDSVQLDIATSKIMDFIKFESGNLCMITGG 186
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKGTK ++SLP+GKG++L
Sbjct: 187 RNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGVRL 246
Query: 182 SIIEEARKRQALATSAAAQ 200
+I EE KR +A A Q
Sbjct: 247 TIAEERDKR--IAAKVAGQ 263
>sp|P0CX36|RS4B_YEAST 40S ribosomal protein S4-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS4B PE=1 SV=1
Length = 261
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSIAEERDRRRA 257
>sp|P0CX35|RS4A_YEAST 40S ribosomal protein S4-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS4A PE=1 SV=1
Length = 261
Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL K
Sbjct: 66 MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIK
Sbjct: 186 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 245
Query: 181 LSIIEEARKRQA 192
LSI EE +R+A
Sbjct: 246 LSIAEERDRRRA 257
>sp|Q861U9|RS4Y1_PANTR 40S ribosomal protein S4, Y isoform 1 OS=Pan troglodytes GN=RPS4Y1
PE=2 SV=2
Length = 263
Score = 267 bits (683), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 246 LTVAAERDKRLATKQSSG 263
>sp|Q861V0|RS4Y1_PANPA 40S ribosomal protein S4, Y isoform 1 OS=Pan paniscus GN=RPS4Y1
PE=3 SV=2
Length = 263
Score = 267 bits (683), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 153/198 (77%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVR D TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 66 MQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL T KI FIKFD GN+ MV G
Sbjct: 126 VRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L++ E KR A S+
Sbjct: 246 LTVAAERDKRLATKQSSG 263
>sp|Q56FH2|RS4_LYSTE 40S ribosomal protein S4 OS=Lysiphlebus testaceipes GN=RpS4 PE=2
SV=1
Length = 262
Score = 267 bits (682), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 154/192 (80%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YP GFMDVV+I KT E FRL+YD KGRF +H I +EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDSNYPLGFMDVVTIEKTGEFFRLIYDVKGRFSIHRISNEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR VQ G KG+P++ T+DGRT+RYPDP+IK NDTI+L++ TNKI + IKFD GN+ M+TG
Sbjct: 126 VRRVQTGPKGVPFLVTHDGRTLRYPDPVIKVNDTIQLEIATNKILDSIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + +RE+H GSF+ HI+D+ GH FATR+ NVF IGKG+K +VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRMNNVFIIGKGSKAYVSLPRGKGVK 245
Query: 181 LSIIEEARKRQA 192
LSI EE KR A
Sbjct: 246 LSIAEERDKRLA 257
>sp|Q4GXU6|RS4_CARGR 40S ribosomal protein S4 OS=Carabus granulatus GN=RpS4 PE=2 SV=1
Length = 261
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 154/195 (78%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + VD KVRTD YP+GFMDV++I KT E FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRLIKVDGKVRTDPNYPSGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI+L++ +KI + IKFD GN+ M+TG
Sbjct: 126 VKRVQTGPKGIPFLVTHDGRTIRYPDPIIKVNDTIQLEIANSKIMDSIKFDSGNLCMITG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
GRN GRVG + NRE+H GSF+ +HI+D+ GH FA RL NVF IGKG+K +VSLP+GKG+K
Sbjct: 186 GRNLGRVGTVVNRERHPGSFDIVHIKDSQGHTFANRLNNVFIIGKGSKAYVSLPRGKGVK 245
Query: 181 LSIIEEARKRQALAT 195
LSI EE KR A T
Sbjct: 246 LSIAEERDKRLAAKT 260
>sp|P47837|RS4_CANAX 40S ribosomal protein S4 OS=Candida albicans GN=RPS4 PE=3 SV=1
Length = 262
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ+HV V KVRTD TYPAGFMDV+++ TNE+FRL YD KG+F +H I EEA +KL K
Sbjct: 66 MQQHVQVVGKVRTDTTYPAGFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEAVYKLGK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V+ VQ G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI FIKFD G +VMVTG
Sbjct: 126 VKKVQLGKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVMVTG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGI 179
GRN GRVG+I +REK +G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGI
Sbjct: 186 GRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGI 245
Query: 180 KLSIIEEARKRQA 192
KLSI EE +R A
Sbjct: 246 KLSISEERDRRXA 258
>sp|Q8TD47|RS4Y2_HUMAN 40S ribosomal protein S4, Y isoform 2 OS=Homo sapiens GN=RPS4Y2
PE=2 SV=3
Length = 263
Score = 260 bits (664), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 121/198 (61%), Positives = 151/198 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQ + +D KVR D TYPAGF+DV+SI KT E+FRL+Y+TKG F +H I EEAK+KLCK
Sbjct: 66 MQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCK 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL T KIT FIKFD GNV MV
Sbjct: 126 VRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIA 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+
Sbjct: 186 GANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIR 245
Query: 181 LSIIEEARKRQALATSAA 198
L+I EE KR A S+
Sbjct: 246 LTIAEERDKRLAAKQSSG 263
>sp|P51405|RS4_DICDI 40S ribosomal protein S4 OS=Dictyostelium discoideum GN=rps4 PE=1
SV=3
Length = 267
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 142/186 (76%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR V VD KVRTD YPAGFMDV+SI KT ENFRLL+D KGRF L I EEAKFKL +
Sbjct: 66 MQRLVKVDGKVRTDPNYPAGFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAKFKLAR 125
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
V V+ G +GIPY++T DGRTIRYPDP I +DTIK+D+E+ KIT FI F+V N+ M+ G
Sbjct: 126 VTRVETGNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVG 185
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIK 180
G N GRVG + +REKH GSF+ +H+ D GH+FATRL NVF IGK ++ +VSLP GKG++
Sbjct: 186 GHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVR 245
Query: 181 LSIIEE 186
S ++E
Sbjct: 246 RSRVDE 251
>sp|Q9N3X2|RS4_CAEEL 40S ribosomal protein S4 OS=Caenorhabditis elegans GN=rps-4 PE=1
SV=1
Length = 259
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 142/191 (74%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
QR V VD KVRT +P GFMDVV+I +TNE FR+LYDTKGR+ +H I+ EA FKLCKV
Sbjct: 66 QRVVRVDGKVRTCHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKV 125
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+SV+ KG+P + T DGRTIRYPDP +K NDTI ++ T KIT+ +KF+ GN+ VTGG
Sbjct: 126 KSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKL 181
RN GRVGII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG K VSLP G GI+L
Sbjct: 186 RNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRL 245
Query: 182 SIIEEARKRQA 192
SI EE KR A
Sbjct: 246 SIAEERDKRMA 256
>sp|P55832|RS4_HORSE 40S ribosomal protein S4 (Fragment) OS=Equus caballus GN=RPS4 PE=2
SV=1
Length = 194
Score = 223 bits (567), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 102/148 (68%), Positives = 123/148 (83%)
Query: 1 MQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK 60
MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H I EEAK+KLCK
Sbjct: 47 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 106
Query: 61 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTG 120
VR + G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTG
Sbjct: 107 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 166
Query: 121 GRNRGRVGIIKNREKHKGSFETIHIQDA 148
G N GR+G+I NRE+H GSF+ +H++DA
Sbjct: 167 GANLGRIGVITNRERHPGSFDVVHVKDA 194
>sp|P0C233|RS4_TETTH 40S ribosomal protein S4 OS=Tetrahymena thermophila PE=1 SV=1
Length = 259
Score = 209 bits (533), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Query: 4 HVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRS 63
+V VD KVR DK YP G MDVV I KT+++FR+LYDTKGRF L S+ EEAK+KL KV +
Sbjct: 70 NVFVDQKVRRDKGYPTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTA 129
Query: 64 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRN 123
G IPYI T+D RTIR+P+P IK DT+K DL NKI F + GNV + G N
Sbjct: 130 KAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNN 189
Query: 124 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSI 183
GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K ++ LP G G++ +I
Sbjct: 190 IGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKLYIELPSGDGVRETI 249
Query: 184 IEEARKRQ 191
+EE RKR+
Sbjct: 250 LEE-RKRK 256
>sp|Q8SRB9|RS4_ENCCU 40S ribosomal protein S4 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RPS4 PE=1 SV=1
Length = 268
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 2 QRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKV 61
++++ V+ +VRT+ +P G DVVSI KT E+FR+LY+ +F LH I EEA ++L KV
Sbjct: 67 EKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV 126
Query: 62 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGG 121
+ ++ +GIPYI + G +IR+ DP I TIK+ ET+K+ E+I V+ V+ G
Sbjct: 127 -TKKYENQGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRG 185
Query: 122 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKP-WVSLPKGKGIK 180
+ RGRVG+I N +G + D G+ F+ + IG+ ++ W++LPK +GI+
Sbjct: 186 KARGRVGVI-NTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIR 244
Query: 181 LSIIEE 186
S +E+
Sbjct: 245 QSELEK 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,641,926
Number of Sequences: 539616
Number of extensions: 3124490
Number of successful extensions: 7049
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6888
Number of HSP's gapped (non-prelim): 109
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)