Query 029048
Match_columns 200
No_of_seqs 86 out of 88
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 10:34:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029048.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029048hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w2n_P Proprotein convertase s 94.5 0.035 1.2E-06 41.5 4.0 65 78-149 38-103 (114)
2 3cnq_P Subtilisin BPN'; unclea 88.2 1.4 4.9E-05 29.8 6.0 57 78-149 9-65 (80)
3 2qtw_A Proprotein convertase s 80.0 6.5 0.00022 29.8 7.1 61 78-149 48-113 (124)
4 1v5i_B POIA1, IA-1=serine prot 48.2 61 0.0021 21.9 7.0 61 78-149 3-65 (76)
5 1wj7_A Hypothetical protein (R 45.4 13 0.00044 28.5 2.6 27 99-125 40-67 (104)
6 1k7j_A Protein YCIO, protein T 44.0 27 0.00091 28.1 4.4 37 102-143 17-54 (206)
7 3md9_A Hemin-binding periplasm 43.6 14 0.00048 28.7 2.6 21 98-118 97-117 (255)
8 2etv_A Iron(III) ABC transport 42.1 35 0.0012 28.3 5.0 21 98-118 137-157 (346)
9 2z30_B TK-subtilisin; thermoco 39.5 15 0.00052 24.4 2.0 24 126-149 31-54 (65)
10 1hru_A YRDC gene product; prot 37.2 32 0.0011 27.1 3.8 37 102-143 10-47 (188)
11 1jcu_A Conserved protein MTH16 36.1 30 0.001 27.9 3.5 37 102-143 16-53 (208)
12 2q8p_A Iron-regulated surface 33.5 28 0.00094 27.0 2.8 20 98-117 96-115 (260)
13 3tef_A VCTP, iron(III) ABC tra 31.6 62 0.0021 25.0 4.6 27 93-119 112-138 (292)
14 2r7a_A Bacterial heme binding 30.9 32 0.0011 26.6 2.8 26 93-119 94-119 (256)
15 4h59_A PIAA, iron-compound ABC 30.4 63 0.0021 25.1 4.4 20 99-118 130-149 (308)
16 1efd_N Ferrichrome-binding per 29.7 40 0.0014 26.3 3.2 20 99-118 105-124 (266)
17 3g9q_A Ferrichrome-binding pro 29.5 27 0.00091 27.5 2.2 19 100-118 106-124 (279)
18 3eb2_A Putative dihydrodipicol 29.3 55 0.0019 27.4 4.2 59 86-153 107-165 (300)
19 2chu_A CEUE, enterochelin upta 28.9 36 0.0012 27.2 2.9 20 98-117 132-151 (296)
20 3gfv_A Uncharacterized ABC tra 28.4 42 0.0014 26.8 3.2 23 96-118 130-152 (303)
21 3lhs_A Ferrichrome ABC transpo 28.3 47 0.0016 26.2 3.4 25 93-118 118-142 (296)
22 2r79_A Periplasmic binding pro 28.2 38 0.0013 26.9 2.9 20 98-117 97-116 (283)
23 3be6_A Putative iron compound- 27.9 39 0.0013 26.6 2.9 20 98-117 123-142 (297)
24 2wi8_A Iron-uptake system-bind 26.5 42 0.0014 27.1 2.9 21 98-118 130-150 (311)
25 1n2z_A Vitamin B12 transport p 26.0 28 0.00097 26.9 1.7 22 98-119 94-115 (245)
26 3e96_A Dihydrodipicolinate syn 25.5 68 0.0023 27.1 4.1 56 86-154 114-169 (316)
27 3abf_A 4-oxalocrotonate tautom 25.0 40 0.0014 20.9 2.0 41 93-134 16-57 (64)
28 3mwf_A Iron-regulated ABC tran 24.8 47 0.0016 26.3 2.9 21 98-118 116-136 (298)
29 3m21_A Probable tautomerase HP 24.7 36 0.0012 22.0 1.8 44 93-136 18-61 (67)
30 3psh_A Protein HI_1472; substr 24.7 47 0.0016 26.8 2.9 21 97-117 139-159 (326)
31 4hn9_A Iron complex transport 24.0 49 0.0017 27.1 2.8 21 98-118 151-171 (335)
32 3tny_A YFIY (ABC transport sys 23.5 51 0.0018 26.2 2.8 20 100-119 132-151 (303)
33 3r5t_A Ferric vibriobactin ABC 23.5 51 0.0018 26.4 2.9 20 99-118 124-143 (305)
34 2oix_A Xanthomonas outer prote 23.1 81 0.0028 24.6 3.9 44 67-112 62-118 (186)
35 4b8y_A FHUD2; transport protei 22.8 42 0.0014 26.4 2.2 18 101-118 113-130 (277)
36 3l7v_A Putative uncharacterize 22.7 50 0.0017 28.8 2.8 26 117-143 57-82 (295)
37 3tlk_A Ferrienterobactin-bindi 21.9 57 0.002 26.4 2.9 21 99-119 153-173 (326)
38 4fxw_B Splicing factor 1; UHM, 21.8 57 0.0019 25.5 2.7 30 136-165 51-84 (124)
39 3mb2_A 4-oxalocrotonate tautom 21.7 49 0.0017 21.7 2.0 44 92-135 15-58 (72)
40 3flu_A DHDPS, dihydrodipicolin 20.4 65 0.0022 26.9 3.0 58 86-152 110-167 (297)
41 3daq_A DHDPS, dihydrodipicolin 20.3 81 0.0028 26.2 3.5 59 86-153 105-163 (292)
No 1
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=94.49 E-value=0.035 Score=41.46 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=46.7
Q ss_pred ceeEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhc-cceeeecceeeeeeeeCHHHHHhhhCCCccc
Q 029048 78 NHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKN-MYAFSTTTYTGFQCTVSEETSEKFKGDKYVN 149 (200)
Q Consensus 78 ~HWLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkk-IYsvSt~tyfGF~c~IdEE~S~KLkGd~~Vn 149 (200)
+.|+|+|..- ++ .+.++.+.+.|+.+|++ +.+.-. +|.+. ..--||.+.++|++.++|+.+|.|.
T Consensus 38 ~~YIV~lk~~----~~-~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~-~~~~GFaa~Lt~~~~~~L~~~P~V~ 103 (114)
T 2w2n_P 38 GTYVVVLKEE----TH-LSQSERTARRLQAQAAR-RGYLTKILHVFH-GLLPGFLVKMSGDLLELALKLPHVD 103 (114)
T ss_dssp EEEEEEECTT----CC-HHHHHHHHHHHHHHHHH-TTCCCEEEEEEC-SSSSEEEEECCGGGHHHHHTSTTEE
T ss_pred CcEEEEECCC----CC-HHHHHHHHHHHHHHhhh-cccCCceEEEec-ccceEEEEEcCHHHHHHHHcCCCcc
Confidence 4699999742 22 34566788888888754 223333 56664 4678999999999999999998775
No 2
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=88.21 E-value=1.4 Score=29.78 Aligned_cols=57 Identities=16% Similarity=0.164 Sum_probs=38.0
Q ss_pred ceeEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCCccc
Q 029048 78 NHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVN 149 (200)
Q Consensus 78 ~HWLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~Vn 149 (200)
+.|+|+|... .+ .++. .+.|++.+|. +-+|.+.. --||.+.+++++.++|+.+|.|.
T Consensus 9 ~~YIV~~k~~---~~-~~~~----~~~~~~~~g~-----~i~~~y~~--~~Gfaa~l~~~~~~~L~~~p~V~ 65 (80)
T 3cnq_P 9 KKYIVGFKQG---FK-SCAK----KEDVISEKGG-----KLQKCFKY--VDAASATLNEKAVEELKKDPSVA 65 (80)
T ss_dssp CEEEEEECTT---CC-SHHH----HHHHHHTTTC-----EEEEECSS--SSEEEEECCHHHHHHHHTCTTEE
T ss_pred CCEEEEECCC---CC-hHHH----HHHHHHHcCC-----cceEEEcc--cEEEEEEcCHHHHHHHHhCCCcc
Confidence 5699999742 22 2222 2344444441 22455553 78999999999999999998876
No 3
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=80.03 E-value=6.5 Score=29.81 Aligned_cols=61 Identities=18% Similarity=0.161 Sum_probs=40.0
Q ss_pred ceeEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHh-----hccceeeecceeeeeeeeCHHHHHhhhCCCccc
Q 029048 78 NHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAK-----KNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVN 149 (200)
Q Consensus 78 ~HWLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAK-----kkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~Vn 149 (200)
+.|+|+|... .+.+ -++..++.|..++ ++ +-+|.+. ..--||.+.+++++.++|+.+|.|.
T Consensus 48 ~~YIV~~K~~----~~~~-~~~~~~~~l~~~~-----~~r~~g~~i~~~Y~-~~~~GFaa~l~~~~~~~L~~~p~V~ 113 (124)
T 2qtw_A 48 GTYVVVLKEE----THLS-QSERTARRLQAQA-----ARRGYLTKILHVFH-GLLPGFLVKMSGDLLELALKLPHVD 113 (124)
T ss_dssp EEEEEEECTT----CCHH-HHHHHHHHHHHHH-----HHTTCCCEEEEEEC-SSSCEEEEECCGGGHHHHHTSTTEE
T ss_pred CCEEEEECCC----CCHH-HHHHHHHHHHHHH-----hhcccCCceEEEec-ccceEEEEEcCHHHHHHHHcCCCCc
Confidence 3589999742 2333 3555555544321 11 2245555 4678999999999999999998875
No 4
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=48.24 E-value=61 Score=21.92 Aligned_cols=61 Identities=15% Similarity=0.325 Sum_probs=37.5
Q ss_pred ceeEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCC--Cccc
Q 029048 78 NHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGD--KYVN 149 (200)
Q Consensus 78 ~HWLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd--~~Vn 149 (200)
+-++|+|.. ..+. +.++...+.+...-|. -...|+ ...--||.+.++|++.++|+.+ |.|.
T Consensus 3 ~sYIV~lk~----~~~~-~~~~~~~~~~~~~gg~----i~~~y~--~~~~~Gfa~~~~~~~l~~l~~~~~p~V~ 65 (76)
T 1v5i_B 3 GKFIVIFKN----DVSE-DKIRETKDEVIAEGGT----ITNEYN--MPGMKGFAGELTPQSLTKFQGLQGDLID 65 (76)
T ss_dssp EEEEEEECT----TCCH-HHHHHHHHHHHHHTCC----CCEEEE--ETTEEEEEEEECHHHHHHHHHTBTTTEE
T ss_pred ceEEEEECC----CCCH-HHHHHHHHHHHhhCCc----eEEEEE--cCceeEEEEEcCHHHHHHHHhcCCCCCc
Confidence 457888842 2333 3455555544443221 011332 3456899999999999999998 6665
No 5
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=45.39 E-value=13 Score=28.55 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhC-CHHHHhhccceeeec
Q 029048 99 ETYLNTLATVLG-SMEEAKKNMYAFSTT 125 (200)
Q Consensus 99 d~Yv~TLAkVLG-SEEEAKkkIYsvSt~ 125 (200)
+--|+.|+..-| +||+|+..+..+.|+
T Consensus 40 eekVk~L~EmtG~seeeAr~AL~~~ngD 67 (104)
T 1wj7_A 40 EEKVKQLIDITGKNQDECVIALHDCNGD 67 (104)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHcCCC
Confidence 556789999988 999999999999984
No 6
>1k7j_A Protein YCIO, protein TF1; structural genomics, X-RAY crystallography, putative translation factor, PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.115.1.1 PDB: 1kk9_A
Probab=43.95 E-value=27 Score=28.08 Aligned_cols=37 Identities=14% Similarity=0.355 Sum_probs=27.2
Q ss_pred HHHHHHHhCCHHHHhhccceeeecceeeeeeee-CHHHHHhhh
Q 029048 102 LNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTV-SEETSEKFK 143 (200)
Q Consensus 102 v~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~I-dEE~S~KLk 143 (200)
++..+++| .+-.|..+.|++-||++|.. +++..++|.
T Consensus 17 i~~a~~~L-----~~G~iva~pTdtvygL~~da~n~~Av~rl~ 54 (206)
T 1k7j_A 17 INQAVEIV-----RKGGVIVYPTDSGYALGCKIEDKNAMERIC 54 (206)
T ss_dssp HHHHHHHH-----HTTCCEEEEETTEEEEEEETTCHHHHHHHH
T ss_pred HHHHHHHH-----HCCCEEEEECCCEEEEEEeCCCHHHHHHHH
Confidence 44555555 23469999999999999996 677777664
No 7
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=43.58 E-value=14 Score=28.71 Aligned_cols=21 Identities=29% Similarity=0.376 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCHHHHhhc
Q 029048 98 IETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKkk 118 (200)
+.-.++.||++||-+++|++-
T Consensus 97 ~~~~i~~lg~~~g~~~~A~~l 117 (255)
T 3md9_A 97 VAMKINAVATALHQTEKGQKL 117 (255)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHH
Confidence 456789999999999998754
No 8
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=42.07 E-value=35 Score=28.28 Aligned_cols=21 Identities=19% Similarity=0.199 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhCCHHHHhhc
Q 029048 98 IETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKkk 118 (200)
+.--++.|+++||-||+|++-
T Consensus 137 ~~~~i~~lG~~lG~e~~A~~l 157 (346)
T 2etv_A 137 LFRSIELAGXILGREERAHEV 157 (346)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHH
Confidence 445578999999999988753
No 9
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=39.54 E-value=15 Score=24.44 Aligned_cols=24 Identities=17% Similarity=0.068 Sum_probs=21.3
Q ss_pred ceeeeeeeeCHHHHHhhhCCCccc
Q 029048 126 TYTGFQCTVSEETSEKFKGDKYVN 149 (200)
Q Consensus 126 tyfGF~c~IdEE~S~KLkGd~~Vn 149 (200)
---|+.++|+++...+|+++|+|.
T Consensus 31 ~I~a~~~~lp~~~~~~L~~~p~V~ 54 (65)
T 2z30_B 31 LIPAVVVDVPANAVGKLKKMPGVE 54 (65)
T ss_dssp SSSEEEEEECGGGHHHHHTSTTEE
T ss_pred CCcEEEEEeCHHHHHHHhcCCCce
Confidence 456899999999999999998876
No 10
>1hru_A YRDC gene product; protein folding, structural genomics, RNA, SUA5, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Escherichia coli} SCOP: d.115.1.1
Probab=37.20 E-value=32 Score=27.05 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=27.1
Q ss_pred HHHHHHHhCCHHHHhhccceeeecceeeeeeee-CHHHHHhhh
Q 029048 102 LNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTV-SEETSEKFK 143 (200)
Q Consensus 102 v~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~I-dEE~S~KLk 143 (200)
++..+++| .+-.|-.+.|++-||++|+. +++..++|.
T Consensus 10 i~~a~~~L-----~~G~iva~ptdt~ygL~~da~~~~av~rl~ 47 (188)
T 1hru_A 10 IAAAIDVL-----NEERVIAYPTEAVFGVGCDPDSETAVMRLL 47 (188)
T ss_dssp HHHHHHHH-----HTTCCEEEECSSSEEEEECTTCHHHHHHHH
T ss_pred HHHHHHHH-----HCCCEEEEeCCCEeeeEEcCCCHHHHHHHH
Confidence 45556666 23468999999999999986 666666664
No 11
>1jcu_A Conserved protein MTH1692; mixed alpha-beta structure, structural genomics; NMR {Methanothermobacterthermautotrophicus} SCOP: d.115.1.1
Probab=36.11 E-value=30 Score=27.92 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=27.0
Q ss_pred HHHHHHHhCCHHHHhhccceeeecceeeeeeee-CHHHHHhhh
Q 029048 102 LNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTV-SEETSEKFK 143 (200)
Q Consensus 102 v~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~I-dEE~S~KLk 143 (200)
++..++.| .+-.|-.+.|++-||++|.. +++..++|.
T Consensus 16 i~~a~~~L-----~~G~vVa~pTdtvygL~~da~n~~Av~rl~ 53 (208)
T 1jcu_A 16 LEEAISVM-----EGGGIVIYPTDTIYGLGVNALDEDAVRRLF 53 (208)
T ss_dssp HHHHHHHH-----HTTCEEECCCSSSCEEEEETTSHHHHHHHH
T ss_pred HHHHHHHH-----HCCCEEEEECCCEEEEEEeCCCHHHHHHHH
Confidence 44455555 22469999999999999997 667777664
No 12
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=33.54 E-value=28 Score=27.02 Aligned_cols=20 Identities=15% Similarity=0.302 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHhCCHHHHhh
Q 029048 98 IETYLNTLATVLGSMEEAKK 117 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKk 117 (200)
+.-.+++||++||.+++|++
T Consensus 96 ~~~~i~~lg~~~g~~~~A~~ 115 (260)
T 2q8p_A 96 MQKSITQLGDQFNRKAQAKE 115 (260)
T ss_dssp HHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhCChHHHHH
Confidence 44557899999999988865
No 13
>3tef_A VCTP, iron(III) ABC transporter, periplasmic iron-compo binding protein; siderophore-binding protein, transport protein; 1.70A {Vibrio cholerae}
Probab=31.65 E-value=62 Score=24.95 Aligned_cols=27 Identities=7% Similarity=0.040 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHHHHhCCHHHHhhcc
Q 029048 93 TREQMIETYLNTLATVLGSMEEAKKNM 119 (200)
Q Consensus 93 Sr~EmId~Yv~TLAkVLGSEEEAKkkI 119 (200)
..-+-+.-.++.|+++||-+++|++-|
T Consensus 112 ~~~~~~~~~~~~lg~~~g~~~~A~~~~ 138 (292)
T 3tef_A 112 GYWESTQQQWRNLGKVFAIEPAVEAKI 138 (292)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhHhhhHHHHHHHHH
Confidence 344556667889999999999998654
No 14
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=30.86 E-value=32 Score=26.63 Aligned_cols=26 Identities=27% Similarity=0.249 Sum_probs=18.8
Q ss_pred CHHHHHHHHHHHHHHHhCCHHHHhhcc
Q 029048 93 TREQMIETYLNTLATVLGSMEEAKKNM 119 (200)
Q Consensus 93 Sr~EmId~Yv~TLAkVLGSEEEAKkkI 119 (200)
+-++ +.-.+++||++||-+++|++-|
T Consensus 94 ~~~~-~~~~i~~lg~~~g~~~~A~~~~ 119 (256)
T 2r7a_A 94 TLEQ-MYANIRQLAKTLQVPEQGDALV 119 (256)
T ss_dssp CHHH-HHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHH-HHHHHHHHHHHhCCHHHHHHHH
Confidence 3444 4446789999999999887643
No 15
>4h59_A PIAA, iron-compound ABC transporter, iron compound-BIND protein; center for structural genomics of infectious diseases; HET: MSE B3P; 1.66A {Streptococcus pneumoniae}
Probab=30.44 E-value=63 Score=25.05 Aligned_cols=20 Identities=15% Similarity=0.197 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCCHHHHhhc
Q 029048 99 ETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 99 d~Yv~TLAkVLGSEEEAKkk 118 (200)
.-.++.|+++||-+++|++-
T Consensus 130 ~~~i~~lg~~~g~~~~A~~~ 149 (308)
T 4h59_A 130 RDMIKIDSKALGMEKEGDEL 149 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 34578899999999998764
No 16
>1efd_N Ferrichrome-binding periplasmic protein; periplasmic binding protein-siderophore complex, FHUD complex with gallichrome; HET: GCR; 1.90A {Escherichia coli} SCOP: c.92.2.1 PDB: 1k7s_N* 1k2v_N* 1esz_A*
Probab=29.74 E-value=40 Score=26.29 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhCCHHHHhhc
Q 029048 99 ETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 99 d~Yv~TLAkVLGSEEEAKkk 118 (200)
.-.+++||++||-+++|++-
T Consensus 105 ~~~i~~lg~~~g~~~~A~~~ 124 (266)
T 1efd_N 105 RKSLTEMADLLNLQSAAETH 124 (266)
T ss_dssp HHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 34578999999999988753
No 17
>3g9q_A Ferrichrome-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.60A {Bacillus subtilis subsp} PDB: 3hxp_A
Probab=29.47 E-value=27 Score=27.49 Aligned_cols=19 Identities=26% Similarity=0.368 Sum_probs=15.6
Q ss_pred HHHHHHHHHhCCHHHHhhc
Q 029048 100 TYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 100 ~Yv~TLAkVLGSEEEAKkk 118 (200)
-.++.||++||-+++|++-
T Consensus 106 ~~i~~lg~~~g~e~~A~~l 124 (279)
T 3g9q_A 106 EQLKEFAKMTGTEDKAEKW 124 (279)
T ss_dssp HHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHH
Confidence 4588999999999988653
No 18
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.30 E-value=55 Score=27.45 Aligned_cols=59 Identities=5% Similarity=0.010 Sum_probs=39.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCCcccceEe
Q 029048 86 FPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVNGEII 153 (200)
Q Consensus 86 ~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~VnG~Iv 153 (200)
.|--.+|+.++++++| +.+|...+ ----||++--.+ |..|+.|+..+|+..|-|-|.--
T Consensus 107 ~P~y~~~~~~~l~~~f-~~va~a~~----lPiilYn~P~~t----g~~l~~~~~~~La~~pnIvgiKd 165 (300)
T 3eb2_A 107 LEAYFPLKDAQIESYF-RAIADAVE----IPVVIYTNPQFQ----RSDLTLDVIARLAEHPRIRYIKD 165 (300)
T ss_dssp ECCSSCCCHHHHHHHH-HHHHHHCS----SCEEEEECTTTC----SSCCCHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCCCCHHHHHHHH-HHHHHHCC----CCEEEEECcccc----CCCCCHHHHHHHHcCCCEEEEEc
Confidence 3444578999999877 45555443 223377765432 67899999999997666655443
No 19
>2chu_A CEUE, enterochelin uptake periplasmic binding protein; iron, mecam, SELF assembly, siderophore; HET: ECA; 2.40A {Campylobacter jejuni} SCOP: c.92.2.4
Probab=28.88 E-value=36 Score=27.16 Aligned_cols=20 Identities=25% Similarity=0.317 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhCCHHHHhh
Q 029048 98 IETYLNTLATVLGSMEEAKK 117 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKk 117 (200)
+.-.++.||++||-+|+|++
T Consensus 132 ~~~~i~~lg~~~g~~~~A~~ 151 (296)
T 2chu_A 132 FENNVLSVAKLYGLEKEALE 151 (296)
T ss_dssp HHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHH
Confidence 45568899999999998864
No 20
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ; alpha-beta-sandwich, periplasmic binding protein fold (PBP fold); 1.75A {Bacillus subtilis subsp}
Probab=28.40 E-value=42 Score=26.76 Aligned_cols=23 Identities=9% Similarity=0.273 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhCCHHHHhhc
Q 029048 96 QMIETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 96 EmId~Yv~TLAkVLGSEEEAKkk 118 (200)
+-+.-.+++||++||-+++|++-
T Consensus 130 ~~~~~~i~~lg~~~g~~~~A~~l 152 (303)
T 3gfv_A 130 ESFKSDAETIGKIFDKEDKVKDE 152 (303)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCChHHHHHH
Confidence 33456689999999999988653
No 21
>3lhs_A Ferrichrome ABC transporter lipoprotein; siderophore, iron, receptor, binding protein, T protein; HET: SF8; 1.30A {Staphylococcus aureus subsp} PDB: 3eiw_A 3eix_A* 3li2_A*
Probab=28.34 E-value=47 Score=26.19 Aligned_cols=25 Identities=28% Similarity=0.344 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHHHHHhCCHHHHhhc
Q 029048 93 TREQMIETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 93 Sr~EmId~Yv~TLAkVLGSEEEAKkk 118 (200)
+.+++. --++.||++||-+++|++-
T Consensus 118 ~~~~~~-~~i~~lg~~~g~~~~A~~~ 142 (296)
T 3lhs_A 118 DYKQNI-NSFKTIAKALNKEKEGEKR 142 (296)
T ss_dssp CHHHHH-HHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHH-HHHHHHHHHhCCHHHHHHH
Confidence 566665 4677999999999998654
No 22
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=28.18 E-value=38 Score=26.93 Aligned_cols=20 Identities=30% Similarity=0.431 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhCCHHHHhh
Q 029048 98 IETYLNTLATVLGSMEEAKK 117 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKk 117 (200)
+.--+++||++||-+++|++
T Consensus 97 ~~~~i~~lg~~~g~~~~A~~ 116 (283)
T 2r79_A 97 LESNLKKLGDWLGVPQRAEA 116 (283)
T ss_dssp HHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHH
Confidence 44557899999999888864
No 23
>3be6_A Putative iron compound-binding protein of ABC TRA family; open form, closed form, group III periplasmic binding protei structural genomics; HET: MSE; 1.82A {Escherichia coli O157} PDB: 3be5_A*
Probab=27.92 E-value=39 Score=26.64 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhCCHHHHhh
Q 029048 98 IETYLNTLATVLGSMEEAKK 117 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKk 117 (200)
+.--++.||++||-+++|++
T Consensus 123 ~~~~~~~lg~~~g~~~~A~~ 142 (297)
T 3be6_A 123 APEIYRKLAELTGTQSQLAI 142 (297)
T ss_dssp HHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHH
Confidence 34457889999999998864
No 24
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=26.46 E-value=42 Score=27.15 Aligned_cols=21 Identities=29% Similarity=0.275 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhCCHHHHhhc
Q 029048 98 IETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKkk 118 (200)
+.--++.||++||-+|+|++-
T Consensus 130 ~~~~i~~lg~~lg~e~~A~~l 150 (311)
T 2wi8_A 130 WKENMMLLAQLTGKEKKAKKI 150 (311)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHH
Confidence 445578999999999988753
No 25
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=26.01 E-value=28 Score=26.87 Aligned_cols=22 Identities=23% Similarity=0.193 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCHHHHhhcc
Q 029048 98 IETYLNTLATVLGSMEEAKKNM 119 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKkkI 119 (200)
+.--+++||++||-+++|++-|
T Consensus 94 ~~~~i~~lg~~lg~~~~A~~~~ 115 (245)
T 1n2z_A 94 IANALRQLAPWSPQPDKAEQAA 115 (245)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHH
Confidence 4556789999999999988644
No 26
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=25.51 E-value=68 Score=27.11 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=39.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCCcccceEec
Q 029048 86 FPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVNGEIIP 154 (200)
Q Consensus 86 ~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~VnG~IvP 154 (200)
.|--.+||.++++++|-+....+ + ----||++ ++.|+.|+..+|...|-|-|.--.
T Consensus 114 ~P~y~~~s~~~l~~~f~~va~a~-~----lPiilYn~--------g~~l~~~~~~~La~~pnIvgiKds 169 (316)
T 3e96_A 114 MPIHPYVTAGGVYAYFRDIIEAL-D----FPSLVYFK--------DPEISDRVLVDLAPLQNLVGVKYA 169 (316)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHH-T----SCEEEEEC--------CTTSCTHHHHHHTTCTTEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhC-C----CCEEEEeC--------CCCCCHHHHHHHHcCCCEEEEEeC
Confidence 45557789999999887665543 2 12236764 678999999999977666554443
No 27
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=25.04 E-value=40 Score=20.95 Aligned_cols=41 Identities=10% Similarity=0.178 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHHHhCCHHHHhhc-cceeeecceeeeeeee
Q 029048 93 TREQMIETYLNTLATVLGSMEEAKKN-MYAFSTTTYTGFQCTV 134 (200)
Q Consensus 93 Sr~EmId~Yv~TLAkVLGSEEEAKkk-IYsvSt~tyfGF~c~I 134 (200)
.+++++....+.|+++||-.++.=+- |..+. ...+||+-..
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v~V~i~e~~-~~~w~~gG~~ 57 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEVRVILYEVR-RDQWAAGGVL 57 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC-GGGEEETTEE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEEEEEEEcC-HHHeeECCEE
Confidence 46678888899999999955444333 33333 2457776543
No 28
>3mwf_A Iron-regulated ABC transporter siderophore-bindin SIRA; ABC transporter binding protein, transport protein; HET: SE8; 1.70A {Staphylococcus aureus subsp} PDB: 3mwg_A
Probab=24.83 E-value=47 Score=26.31 Aligned_cols=21 Identities=19% Similarity=0.265 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhCCHHHHhhc
Q 029048 98 IETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKkk 118 (200)
+.-.++.||++||-+++|++-
T Consensus 116 ~~~~i~~lg~~~g~~~~A~~l 136 (298)
T 3mwf_A 116 FKDTTKLMGKALGKEKEAEDL 136 (298)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHH
Confidence 445678999999999887653
No 29
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=24.73 E-value=36 Score=21.97 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCH
Q 029048 93 TREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSE 136 (200)
Q Consensus 93 Sr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdE 136 (200)
.|+++++...+.|+++||-..|.-.-+..---...||||-..-.
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~v~V~i~e~~~~~w~~gG~~~~ 61 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESVH 61 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCEEEEEECCTTTEEETTEEHH
T ss_pred HHHHHHHHHHHHHHHHHCcCcccEEEEEEEeCHHHeEECCEEHH
Confidence 46788899999999999965555444444334467888765433
No 30
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=24.73 E-value=47 Score=26.78 Aligned_cols=21 Identities=10% Similarity=0.207 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhCCHHHHhh
Q 029048 97 MIETYLNTLATVLGSMEEAKK 117 (200)
Q Consensus 97 mId~Yv~TLAkVLGSEEEAKk 117 (200)
-+.--++.||++||-+++|++
T Consensus 139 ~~~~~i~~lg~~lg~e~~A~~ 159 (326)
T 3psh_A 139 GLKQGIELIAEVFEKKQQGDE 159 (326)
T ss_dssp HHHHHHHHHHHHHTCHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHH
Confidence 355678999999999998864
No 31
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.96 E-value=49 Score=27.12 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhCCHHHHhhc
Q 029048 98 IETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 98 Id~Yv~TLAkVLGSEEEAKkk 118 (200)
+.-.++.||++||-+++|++-
T Consensus 151 ~~~~i~~lg~~lg~e~~A~~l 171 (335)
T 4hn9_A 151 LEECITLVGKITNNAGRAEAL 171 (335)
T ss_dssp HHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHH
Confidence 456788999999999988654
No 32
>3tny_A YFIY (ABC transport system substrate-binding PROT; schizokinen, nutrient binding protein, ABC transporter, metal transport; HET: SKZ; 1.55A {Bacillus cereus}
Probab=23.53 E-value=51 Score=26.24 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=16.2
Q ss_pred HHHHHHHHHhCCHHHHhhcc
Q 029048 100 TYLNTLATVLGSMEEAKKNM 119 (200)
Q Consensus 100 ~Yv~TLAkVLGSEEEAKkkI 119 (200)
-.++.||++||-+++|++-|
T Consensus 132 ~~i~~lg~~~g~e~~A~~li 151 (303)
T 3tny_A 132 DNFKFYAKALNKEKEGQKVV 151 (303)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhCchHHHHHHH
Confidence 35789999999999987643
No 33
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding protein; iron-vibriobactin transport protein; HET: VBN; 1.45A {Vibrio cholerae} PDB: 3r5s_A*
Probab=23.47 E-value=51 Score=26.44 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhCCHHHHhhc
Q 029048 99 ETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 99 d~Yv~TLAkVLGSEEEAKkk 118 (200)
.-.+++||++||-+++|++-
T Consensus 124 ~~~i~~lg~~lg~~~~A~~l 143 (305)
T 3r5t_A 124 QSLAQQLGLATGLEEQAERT 143 (305)
T ss_dssp HHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 34589999999999998754
No 34
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A
Probab=23.11 E-value=81 Score=24.64 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=28.5
Q ss_pred CcccccCCCC-Ccee-EEEEcCCCCCC-----------CCHHHHHHHHHHHHHHHhCCH
Q 029048 67 RETIMLPGCD-YNHW-LIVMEFPKDPA-----------PTREQMIETYLNTLATVLGSM 112 (200)
Q Consensus 67 ~~tiLf~GCD-y~HW-LVvMd~P~~~~-----------pSr~EmId~Yv~TLAkVLGSE 112 (200)
++.|++|=++ -.|| |+|++.+.... ..+. ....++.|.+.||.+
T Consensus 62 ~~~i~iPin~~~~HWsLlvi~~~~~~~~~~~~~DSl~~~~~~--~~~l~~~l~~~l~~~ 118 (186)
T 2oix_A 62 PPIVFLPINQPNAHWSLLVVDRRNKDAVAAYHYDSMAQKDPQ--QRYLADMAAYHLGLD 118 (186)
T ss_dssp CSEEEEEEEETTTEEEEEEEECSSTTSCEEEEECCCSSCCHH--HHHHHHHHHHHTTCC
T ss_pred cCEEEEEEeCCCCccEEEEEECCCCeeeeeEEEcCCCCCCHH--HHHHHHHHHHHhCCC
Confidence 8889999887 6899 56777775422 2222 334566677777743
No 35
>4b8y_A FHUD2; transport protein-siderophore complex, transport protein, VA siderophore, class III solute binding, inhibitor protein (S; HET: AHO; 1.90A {Staphylococcus aureus subsp}
Probab=22.81 E-value=42 Score=26.40 Aligned_cols=18 Identities=17% Similarity=0.268 Sum_probs=14.7
Q ss_pred HHHHHHHHhCCHHHHhhc
Q 029048 101 YLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 101 Yv~TLAkVLGSEEEAKkk 118 (200)
-++.||++||-+++|++-
T Consensus 113 ~~~~lg~~~g~~~~A~~~ 130 (277)
T 4b8y_A 113 QQEMLGKIVGKEDKVKAW 130 (277)
T ss_dssp HHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHH
Confidence 359999999999888653
No 36
>3l7v_A Putative uncharacterized protein SMU.1377C; transcription; 2.26A {Streptococcus mutans}
Probab=22.72 E-value=50 Score=28.82 Aligned_cols=26 Identities=8% Similarity=-0.125 Sum_probs=22.8
Q ss_pred hccceeeecceeeeeeeeCHHHHHhhh
Q 029048 117 KNMYAFSTTTYTGFQCTVSEETSEKFK 143 (200)
Q Consensus 117 kkIYsvSt~tyfGF~c~IdEE~S~KLk 143 (200)
-.|-.+.|++-||++| .+++..++|.
T Consensus 57 GgIVa~PTdTvYGL~c-~n~~AV~rL~ 82 (295)
T 3l7v_A 57 GGVIVCPTKVGYIIMT-SDKKGLERKF 82 (295)
T ss_dssp TCEEEEEETTEEEEEE-SSHHHHHHHH
T ss_pred CCEEEEECCCEEEEEE-cCHHHHHHHH
Confidence 3599999999999999 9999888665
No 37
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=21.88 E-value=57 Score=26.43 Aligned_cols=21 Identities=19% Similarity=0.433 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhCCHHHHhhcc
Q 029048 99 ETYLNTLATVLGSMEEAKKNM 119 (200)
Q Consensus 99 d~Yv~TLAkVLGSEEEAKkkI 119 (200)
.-.++.||++||-+++|++-|
T Consensus 153 ~~~i~~lg~~lg~~~~A~~li 173 (326)
T 3tlk_A 153 QSLLTQLGEITGHEKQAAERI 173 (326)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHH
Confidence 345899999999999987643
No 38
>4fxw_B Splicing factor 1; UHM, protein binding, phosphorylat; HET: SEP; 2.29A {Homo sapiens} PDB: 4fxx_A
Probab=21.84 E-value=57 Score=25.54 Aligned_cols=30 Identities=23% Similarity=0.483 Sum_probs=17.7
Q ss_pred HHHHHhhh-CCCccc---ceEecCCCCCCCCCCC
Q 029048 136 EETSEKFK-GDKYVN---GEIIPCTYPTYQPNKR 165 (200)
Q Consensus 136 EE~S~KLk-Gd~~Vn---G~IvPrp~p~yq~~~~ 165 (200)
||++.||+ |+..|. +.=.|+|.|.|.....
T Consensus 51 eeIt~kL~~g~l~i~~~~~~RSPSPpP~Yd~~G~ 84 (124)
T 4fxw_B 51 EDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGK 84 (124)
T ss_dssp HHHHHHHHHCCCCCCSSTTSSCCCCCCCBCTTSC
T ss_pred HHHHHHHhcCCcCCCCCcccCCCCCCCccCcccc
Confidence 56666666 443332 4557777777775543
No 39
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=21.69 E-value=49 Score=21.68 Aligned_cols=44 Identities=5% Similarity=-0.091 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeC
Q 029048 92 PTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVS 135 (200)
Q Consensus 92 pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~Id 135 (200)
-.|+++++...+.|+++||-.+|.-.-+..---...||||-..-
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~v~V~i~e~~~~~w~~gG~~~ 58 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAEVRLIIQEVPPTHWTVGGISM 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECGGGEEETTEET
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEEH
Confidence 35678899999999999996655544443333336677775543
No 40
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=20.36 E-value=65 Score=26.90 Aligned_cols=58 Identities=14% Similarity=0.218 Sum_probs=39.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCCcccceE
Q 029048 86 FPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVNGEI 152 (200)
Q Consensus 86 ~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~VnG~I 152 (200)
.|--.+|+.++++++|-+ +|...+ ----||++--.+ |+.|+.|+..+|+..|-|-|.-
T Consensus 110 ~P~y~~~~~~~l~~~f~~-va~a~~----lPiilYn~P~~t----g~~l~~~~~~~La~~pnivgiK 167 (297)
T 3flu_A 110 VPYYNKPSQEGIYQHFKT-IAEATS----IPMIIYNVPGRT----VVSMTNDTILRLAEIPNIVGVK 167 (297)
T ss_dssp CCCSSCCCHHHHHHHHHH-HHHHCC----SCEEEEECHHHH----SSCCCHHHHHHHTTSTTEEEEE
T ss_pred CCCCCCCCHHHHHHHHHH-HHHhCC----CCEEEEECCchh----ccCCCHHHHHHHHcCCCEEEEE
Confidence 455567899999988754 444432 223378775432 7899999999999776665544
No 41
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=20.29 E-value=81 Score=26.25 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=39.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCCcccceEe
Q 029048 86 FPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVNGEII 153 (200)
Q Consensus 86 ~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~VnG~Iv 153 (200)
.|--.+|+.++++++|-+.... .+ ----||++--.+ |..|+.|+..+|...|-|-|.--
T Consensus 105 ~P~y~~~~~~~l~~~f~~ia~a-~~----lPiilYn~P~~t----g~~l~~~~~~~La~~pnivgiK~ 163 (292)
T 3daq_A 105 TPYYNKTNQRGLVKHFEAIADA-VK----LPVVLYNVPSRT----NMTIEPETVEILSQHPYIVALKD 163 (292)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHH-HC----SCEEEEECHHHH----SCCCCHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHh-CC----CCEEEEeccccc----CCCCCHHHHHHHhcCCCEEEEEe
Confidence 4555678999999988655433 32 223377765432 78999999999998766655443
Done!