Query 029048
Match_columns 200
No_of_seqs 86 out of 88
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 10:34:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029048.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029048hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1scjb_ d.58.3.2 (B:) Subtilis 62.7 2.2 0.00016 27.9 2.4 24 126-149 37-60 (71)
2 d2etva1 c.92.2.4 (A:25-358) Pu 52.9 9 0.00066 29.5 5.0 36 82-118 110-145 (334)
3 d1hl2a_ c.1.10.1 (A:) N-acetyl 50.4 16 0.0012 27.7 6.0 69 79-156 99-167 (295)
4 d2v94a1 d.12.1.3 (A:1-93) Ribo 48.8 9.9 0.00072 26.4 4.2 57 80-143 19-82 (93)
5 d2g1da1 d.12.1.3 (A:1-98) Ribo 35.2 12 0.00087 26.2 2.8 57 80-143 19-82 (98)
6 d1xn9a_ d.12.1.3 (A:) Ribosoma 34.6 20 0.0014 25.2 3.9 56 80-143 19-81 (101)
7 d1v5ib1 d.58.3.2 (B:1-72) Prot 33.6 9.5 0.00069 24.6 1.9 56 80-146 5-60 (72)
8 d1ywxa1 d.12.1.3 (A:1-102) Rib 33.2 20 0.0015 25.2 3.7 44 80-131 19-62 (102)
9 d1esza_ c.92.2.1 (A:) Periplas 28.9 20 0.0014 26.1 3.2 22 96-117 100-121 (260)
10 d2iida2 d.16.1.5 (A:320-432) L 28.3 21 0.0015 22.7 2.9 27 90-116 63-89 (113)
11 d1hrua_ d.115.1.1 (A:) Hypothe 27.9 27 0.002 25.0 3.8 26 118-143 19-45 (186)
12 d1wmub_ a.1.1.2 (B:) Hemoglobi 25.7 16 0.0011 25.5 2.0 29 94-122 103-136 (146)
13 d2v5za2 d.16.1.5 (A:290-401) M 25.5 19 0.0014 22.7 2.3 24 90-113 64-87 (112)
14 d1k7ja_ d.115.1.1 (A:) Hypothe 25.4 39 0.0028 24.9 4.4 26 118-143 28-54 (206)
15 d1jcua_ d.115.1.1 (A:) Hypothe 24.2 17 0.0012 27.1 2.1 27 117-143 26-53 (208)
16 d1wj7a1 a.5.2.1 (A:8-98) Ubiqu 23.5 20 0.0015 25.3 2.2 31 97-127 31-62 (91)
17 d2dw4a3 d.16.1.5 (A:655-763) L 22.7 32 0.0024 21.2 3.0 24 90-113 62-85 (109)
18 d2dn3b1 a.1.1.2 (B:2-146) Hemo 21.5 18 0.0013 25.2 1.6 30 93-122 101-135 (145)
19 d1f74a_ c.1.10.1 (A:) N-acetyl 20.8 48 0.0035 24.9 4.1 64 83-155 104-167 (293)
20 d1spgb_ a.1.1.2 (B:) Hemoglobi 20.7 24 0.0017 24.7 2.2 35 88-122 97-137 (147)
21 d1xkta_ c.69.1.22 (A:) Fatty a 20.5 75 0.0055 20.7 4.6 67 81-156 52-123 (286)
22 d1b5qa2 d.16.1.5 (A:294-405) P 20.2 36 0.0026 21.3 2.8 22 91-112 66-87 (112)
23 d1spga_ a.1.1.2 (A:) Hemoglobi 20.1 30 0.0022 23.5 2.6 30 93-122 99-133 (143)
No 1
>d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]}
Probab=62.68 E-value=2.2 Score=27.86 Aligned_cols=24 Identities=21% Similarity=0.238 Sum_probs=21.9
Q ss_pred ceeeeeeeeCHHHHHhhhCCCccc
Q 029048 126 TYTGFQCTVSEETSEKFKGDKYVN 149 (200)
Q Consensus 126 tyfGF~c~IdEE~S~KLkGd~~Vn 149 (200)
.--||.++|+|+..++|+.+|.|.
T Consensus 37 ~i~gfs~~l~~~~~~~L~~~p~V~ 60 (71)
T d1scjb_ 37 YVNAAAATLDEKAVKELKKDPSVA 60 (71)
T ss_dssp SSSEEEEEECHHHHHHHHTSTTEE
T ss_pred ecceEEEEeCHHHHHHHHcCCCce
Confidence 478999999999999999998876
No 2
>d2etva1 c.92.2.4 (A:25-358) Putative iron(III) transporter TM0189 {Thermotoga maritima [TaxId: 2336]}
Probab=52.87 E-value=9 Score=29.46 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=23.5
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhc
Q 029048 82 IVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKN 118 (200)
Q Consensus 82 VvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkk 118 (200)
|+++.......+.+++.+ .++.||+++|-|++|++-
T Consensus 110 ~~~~~~~~~~~~~~~~~~-~i~~lg~~~g~e~~A~~~ 145 (334)
T d2etva1 110 VVLSYGNLGTFEDEDLFR-SIELAGKILGREERAHEV 145 (334)
T ss_dssp EEECCCCTTCSCCHHHHH-HHHHHHHHHTCHHHHHHH
T ss_pred EEecccccccCCHHHHHH-HHHHHhcccCchHHHHHH
Confidence 444544333344455444 589999999999999754
No 3
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=50.45 E-value=16 Score=27.70 Aligned_cols=69 Identities=9% Similarity=-0.017 Sum_probs=47.3
Q ss_pred eeEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCCcccceEecCC
Q 029048 79 HWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVNGEIIPCT 156 (200)
Q Consensus 79 HWLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~VnG~IvPrp 156 (200)
+|+++| .|.--.++.++++++|.+.++.+-+- -.-+|+.- . ..+..|+.|+..+|...|.|-|.-...+
T Consensus 99 d~~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~----~ii~y~~P--~--~~g~~l~~~~l~~L~~~pnvvgiK~~~~ 167 (295)
T d1hl2a_ 99 DAVSAV-TPFYYPFSFEEHCDHYRAIIDSADGL----PMVVYNIP--A--RSGVKLTLDQINTLVTLPGVGALKQTSG 167 (295)
T ss_dssp SEEEEE-CCCSSCCCHHHHHHHHHHHHHHHTTS----CEEEEECH--H--HHCCCCCHHHHHHHHTSTTEEEEEECCC
T ss_pred ceeeee-eccccCCChHHHHHHHHHHhcccCcC----cccccccc--c--ccccccccccccccccCcchhhhccccc
Confidence 578887 44456789999999999988665320 11244432 1 3466899999999998877777655543
No 4
>d2v94a1 d.12.1.3 (A:1-93) Ribosomal protein S24e {Pyrococcus abyssi [TaxId: 29292]}
Probab=48.75 E-value=9.9 Score=26.41 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=35.7
Q ss_pred eEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceee------eeeeeC-HHHHHhhh
Q 029048 80 WLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTG------FQCTVS-EETSEKFK 143 (200)
Q Consensus 80 WLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfG------F~c~Id-EE~S~KLk 143 (200)
-.+.+..|+.+.||+.||++- ||+.+|.. +..|+-....+.|| |+=.-| +|.+.+++
T Consensus 19 i~~~v~h~g~~Tpsr~ei~~k----la~~~~~~---~~~vvv~~~~t~fG~~~stG~a~IYd~~e~~kk~E 82 (93)
T d2v94a1 19 IYFEIYHPGEPTPSRKDVKGK----LVAMLDLN---PETTVIQYIRSYFGSYKSKGYAKYYYDKDRMLYIE 82 (93)
T ss_dssp EEEEEECTTSCCCCHHHHHHH----HHHHHTCC---GGGEEEEEEECCTTCSEEEEEEEEESSHHHHHHHS
T ss_pred EEEEEEcCCCCCCCHHHHHHH----HHHHHCCC---CCEEEEEeCccCCCCceEEEEEEEECCHHHHHhhC
Confidence 345667898899999999875 67777752 23455444545554 443443 55555654
No 5
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma acidophilum [TaxId: 2303]}
Probab=35.24 E-value=12 Score=26.24 Aligned_cols=57 Identities=19% Similarity=0.318 Sum_probs=35.6
Q ss_pred eEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeeccee------eeeeeeCH-HHHHhhh
Q 029048 80 WLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYT------GFQCTVSE-ETSEKFK 143 (200)
Q Consensus 80 WLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyf------GF~c~IdE-E~S~KLk 143 (200)
-.+.+..|+.+.||+.||++- ||+.+|+ .+..|+-....+.| ||+=.-|- |.+.++.
T Consensus 19 i~~~v~h~g~~Tpsr~ei~~k----la~~~~~---~~~~vvv~~~~t~fG~~~stG~a~IYd~~e~~kk~E 82 (98)
T d2g1da1 19 IKYVLKFDSSRTPSREEIKEL----IAKHEGV---DKELVIVDNNKQLTGKHEIEGYTKIYADKPSAMLYE 82 (98)
T ss_dssp EEEEEECCTTSCCCHHHHHHH----HHHHHHS---CSTTEECCCCCCCSSSSEEEEEEEEESHHHHHHHHC
T ss_pred EEEEEEeCCCCCCCHHHHHHH----HHHHHCC---CcCEEEEEcCEecCCCceEEEEEEEECCHHHHHhhC
Confidence 345567898899999999875 5666664 23445555555555 45555553 4455565
No 6
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=34.58 E-value=20 Score=25.18 Aligned_cols=56 Identities=14% Similarity=0.223 Sum_probs=36.5
Q ss_pred eEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeee------eee-CHHHHHhhh
Q 029048 80 WLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQ------CTV-SEETSEKFK 143 (200)
Q Consensus 80 WLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~------c~I-dEE~S~KLk 143 (200)
-.+.+..|+ +.||+.||++ -||+.+|+. +..|+-....+.||=+ =.- |+|.+.++.
T Consensus 19 i~~~v~h~g-~Tpsr~ei~~----kla~~~~~~---~~~vvv~~~~t~fG~~~stG~a~IYd~~e~~k~~E 81 (101)
T d1xn9a_ 19 LDFIVKYEG-STPSRNDVRN----KLAAMLNAP---LELLVIQRIKTEYGMQESKGYAKLYEDADRMKQVE 81 (101)
T ss_dssp EEEEEECSS-SCCCHHHHHH----HHHHHTTCC---TTTEEEEEEEECSSSSEEEEEEEECSCHHHHHHHH
T ss_pred EEEEEECCC-CCCCHHHHHH----HHHHhHCcC---cCEEEEEcCcccCCCceEEEEEEEECCHHHHHhhC
Confidence 345566786 7999999965 578888862 4566666666666543 222 566666665
No 7
>d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]}
Probab=33.59 E-value=9.5 Score=24.55 Aligned_cols=56 Identities=13% Similarity=0.284 Sum_probs=33.3
Q ss_pred eEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCC
Q 029048 80 WLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDK 146 (200)
Q Consensus 80 WLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~ 146 (200)
.+|+|.. + .+. .-++.....++..-|. ....++...--||.+.++|+..++|+.+|
T Consensus 5 YIVvlK~---~-~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~GFaa~l~e~~l~~lr~~p 60 (72)
T d1v5ib1 5 FIVIFKN---D-VSE-DKIRETKDEVIAEGGT------ITNEYNMPGMKGFAGELTPQSLTKFQGLQ 60 (72)
T ss_dssp EEEEECT---T-CCH-HHHHHHHHHHHHHTCC------CCEEEEETTEEEEEEEECHHHHHHHHHTB
T ss_pred EEEEECC---C-CCH-HHHHHHHHHHHhcCCc------eEEEEeeeeeeEEEEecCHHHHHHHHhCC
Confidence 4677763 2 233 3345555555443321 11223334578999999999999999743
No 8
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=33.24 E-value=20 Score=25.23 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=29.4
Q ss_pred eEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeee
Q 029048 80 WLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQ 131 (200)
Q Consensus 80 WLVvMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~ 131 (200)
-.+.+..|+ +.||+.||++ -||+.+|. -++.|+-....+.||=+
T Consensus 19 i~~~v~h~g-~Tpsr~ei~~----kla~~~~~---~~~~vvv~~~~t~fG~~ 62 (102)
T d1ywxa1 19 IKFTVSFDA-ATPSIKDVKM----KLVAVLNA---NKQVLVVDTLDQIFGKL 62 (102)
T ss_dssp EEEEEECSS-CCCCHHHHHH----HHHHHHTS---CSTTEEEEEEEECSSSS
T ss_pred EEEEEECCC-CCCCHHHHHH----HHHHHHCc---CcCEEEEEcCEecCCCC
Confidence 345566786 8899999965 57888885 23456666666666533
No 9
>d1esza_ c.92.2.1 (A:) Periplasmic ferric siderophore binding protein FhuD {Escherichia coli [TaxId: 562]}
Probab=28.90 E-value=20 Score=26.06 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHhCCHHHHhh
Q 029048 96 QMIETYLNTLATVLGSMEEAKK 117 (200)
Q Consensus 96 EmId~Yv~TLAkVLGSEEEAKk 117 (200)
+-+.-.+++||+++|.+++|++
T Consensus 100 ~~~~~~i~~lg~~~g~~~~A~~ 121 (260)
T d1esza_ 100 AMARKSLTEMADLLNLQSAAET 121 (260)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhhhcCcHHHHHH
Confidence 4456667999999999999964
No 10
>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=28.33 E-value=21 Score=22.72 Aligned_cols=27 Identities=11% Similarity=0.044 Sum_probs=22.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHh
Q 029048 90 PAPTREQMIETYLNTLATVLGSMEEAK 116 (200)
Q Consensus 90 ~~pSr~EmId~Yv~TLAkVLGSEEEAK 116 (200)
..-+.+|+++.-++.|++++|+.+++.
T Consensus 63 ~~l~~e~~~~~~l~~L~~~~~~~~~~~ 89 (113)
T d2iida2 63 QALDFKDCADIVFNDLSLIHQLPKKDI 89 (113)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHcCCccccc
Confidence 455789999999999999999755443
No 11
>d1hrua_ d.115.1.1 (A:) Hypothetical protein YrdC {Escherichia coli [TaxId: 562]}
Probab=27.95 E-value=27 Score=24.97 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=21.2
Q ss_pred ccceeeecceeeeeeee-CHHHHHhhh
Q 029048 118 NMYAFSTTTYTGFQCTV-SEETSEKFK 143 (200)
Q Consensus 118 kIYsvSt~tyfGF~c~I-dEE~S~KLk 143 (200)
.|=.+-|+|-||++|.. +++..++|.
T Consensus 19 ~iv~~PTdt~Ygl~~~~~~~~av~~i~ 45 (186)
T d1hrua_ 19 RVIAYPTEAVFGVGCDPDSETAVMRLL 45 (186)
T ss_dssp CCEEEECSSSEEEEECTTCHHHHHHHH
T ss_pred CEEEEECCceeEEEEeCCChHHHHHHH
Confidence 47888999999999986 577766665
No 12
>d1wmub_ a.1.1.2 (B:) Hemoglobin, beta-chain {Aldabra giant tortoise (Geochelone gigantea) [TaxId: 167804]}
Probab=25.74 E-value=16 Score=25.48 Aligned_cols=29 Identities=14% Similarity=0.021 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhCC-----HHHHhhcccee
Q 029048 94 REQMIETYLNTLATVLGS-----MEEAKKNMYAF 122 (200)
Q Consensus 94 r~EmId~Yv~TLAkVLGS-----EEEAKkkIYsv 122 (200)
-+.|-.+.+++|+++||. .++|=.|+|++
T Consensus 103 f~~~~~~ll~~l~~~lg~~~t~e~~~AW~k~~~~ 136 (146)
T d1wmub_ 103 FKLLGNILIIVLATHFPKEFTPASQAAWTKLVNA 136 (146)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHH
Confidence 456789999999999995 36677777763
No 13
>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.48 E-value=19 Score=22.75 Aligned_cols=24 Identities=33% Similarity=0.466 Sum_probs=21.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCHH
Q 029048 90 PAPTREQMIETYLNTLATVLGSME 113 (200)
Q Consensus 90 ~~pSr~EmId~Yv~TLAkVLGSEE 113 (200)
..-+.+|+++..++.|++++|..+
T Consensus 64 ~~ls~~e~~~~~l~~L~~~~g~~~ 87 (112)
T d2v5za2 64 ARLTKEERLKKLCELYAKVLGSLE 87 (112)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCGG
T ss_pred HhCCHHHHHHHHHHHHHHHhCccc
Confidence 456899999999999999999654
No 14
>d1k7ja_ d.115.1.1 (A:) Hypothetical protein YciO {Escherichia coli [TaxId: 562]}
Probab=25.42 E-value=39 Score=24.90 Aligned_cols=26 Identities=12% Similarity=0.350 Sum_probs=21.2
Q ss_pred ccceeeecceeeeeeeeC-HHHHHhhh
Q 029048 118 NMYAFSTTTYTGFQCTVS-EETSEKFK 143 (200)
Q Consensus 118 kIYsvSt~tyfGF~c~Id-EE~S~KLk 143 (200)
.|-.+-|+|-||++|... ++..++|-
T Consensus 28 ~vv~~PTdTvYgl~~da~~~~av~~i~ 54 (206)
T d1k7ja_ 28 GVIVYPTDSGYALGCKIEDKNAMERIC 54 (206)
T ss_dssp CCEEEEETTEEEEEEETTCHHHHHHHH
T ss_pred CEEEEECCceeEEEEeCCChHHHHHHH
Confidence 588999999999999874 66666654
No 15
>d1jcua_ d.115.1.1 (A:) Hypothetical protein MTH1692 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.24 E-value=17 Score=27.06 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=22.2
Q ss_pred hccceeeecceeeeeeee-CHHHHHhhh
Q 029048 117 KNMYAFSTTTYTGFQCTV-SEETSEKFK 143 (200)
Q Consensus 117 kkIYsvSt~tyfGF~c~I-dEE~S~KLk 143 (200)
-.|-.+-|+|-|||+|.. +++..++|.
T Consensus 26 Ggivi~PTdtvYgl~c~a~~~~av~~i~ 53 (208)
T d1jcua_ 26 GGIVIYPTDTIYGLGVNALDEDAVRRLF 53 (208)
T ss_dssp TCEEECCCSSSCEEEEETTSHHHHHHHH
T ss_pred CCEEEEEcCceeeeEEeCCCcHHHHHHH
Confidence 358889999999999985 788776664
No 16
>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.45 E-value=20 Score=25.34 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhC-CHHHHhhccceeeecce
Q 029048 97 MIETYLNTLATVLG-SMEEAKKNMYAFSTTTY 127 (200)
Q Consensus 97 mId~Yv~TLAkVLG-SEEEAKkkIYsvSt~ty 127 (200)
-|...|+.|..+-| ||+||-..+|+|--+.+
T Consensus 31 ~i~~kVkql~e~T~rsede~~~ALhDcn~D~~ 62 (91)
T d1wj7a1 31 DFEEKVKQLIDITGKNQDECVIALHDCNGDVN 62 (91)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhcCCccHH
Confidence 37889999999999 99999999999877553
No 17
>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.68 E-value=32 Score=21.25 Aligned_cols=24 Identities=17% Similarity=0.296 Sum_probs=20.8
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCHH
Q 029048 90 PAPTREQMIETYLNTLATVLGSME 113 (200)
Q Consensus 90 ~~pSr~EmId~Yv~TLAkVLGSEE 113 (200)
..-+.+|+++.-++.|++++|+..
T Consensus 62 ~~l~~~~~~~~~l~~L~~~~~~~~ 85 (109)
T d2dw4a3 62 ENISDDVIVGRCLAILKGIFGSSA 85 (109)
T ss_dssp TTSCHHHHHHHHHHHHHHHHCTTT
T ss_pred HhcCHHHHHHHHHHHHHHHhCccc
Confidence 456899999999999999999643
No 18
>d2dn3b1 a.1.1.2 (B:2-146) Hemoglobin, beta-chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.55 E-value=18 Score=25.20 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHHHhCCH-----HHHhhcccee
Q 029048 93 TREQMIETYLNTLATVLGSM-----EEAKKNMYAF 122 (200)
Q Consensus 93 Sr~EmId~Yv~TLAkVLGSE-----EEAKkkIYsv 122 (200)
--+.|-++.+.+|+..||.. ++|=.|+|++
T Consensus 101 ~f~~~~~~ll~~l~~~lg~~~t~e~~~AW~k~~~~ 135 (145)
T d2dn3b1 101 NFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAG 135 (145)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCccCCHHHHHHHHHHHHH
Confidence 34788999999999999954 6677888863
No 19
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=20.75 E-value=48 Score=24.87 Aligned_cols=64 Identities=14% Similarity=0.053 Sum_probs=41.5
Q ss_pred EEcCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhhCCCcccceEecC
Q 029048 83 VMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGDKYVNGEIIPC 155 (200)
Q Consensus 83 vMd~P~~~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLkGd~~VnG~IvPr 155 (200)
.+=.|.--.+|.+|++++|.+ ++...+- ---||+.-.. + |..|+.|+..+|...+.|-|.-...
T Consensus 104 ~~~pP~~~~~s~~~~~~~~~~-v~~~~~~----pi~iYn~P~~--t--g~~l~~~~l~~L~~~~~v~giK~~~ 167 (293)
T d1f74a_ 104 SAVTPFYYKFSFPEIKHYYDT-IIAETGS----NMIVYSIPFL--T--GVNMGIEQFGELYKNPKVLGVKFTA 167 (293)
T ss_dssp ECCCCCSSCCCHHHHHHHHHH-HHHHHCC----CEEEECCSSC--S--CHHHHHHHHHHHHTSTTEEEEEECC
T ss_pred eccCccccccchHHHHHHHhc-ccccCCc----eEEEEeeccc--e--eccccchhhhhhhhcccccccccCC
Confidence 333444567899999999954 4554431 1236665432 2 3469999999999888777654433
No 20
>d1spgb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Fish (Leiostomus xanthurus) [TaxId: 59837]}
Probab=20.71 E-value=24 Score=24.71 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=26.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CH-----HHHhhcccee
Q 029048 88 KDPAPTREQMIETYLNTLATVLG-SM-----EEAKKNMYAF 122 (200)
Q Consensus 88 ~~~~pSr~EmId~Yv~TLAkVLG-SE-----EEAKkkIYsv 122 (200)
+.....-+.|-++.+++|+.+|| +. ++|=.|+|++
T Consensus 97 gV~~~~F~~l~~~ll~~l~~~lG~~~fT~e~~~AW~k~~~~ 137 (147)
T d1spgb_ 97 HVDPDNFRLLGEIITMCVGAKFGPSAFTPEIHEAWQKFLAV 137 (147)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHH
Confidence 34444556789999999999999 53 5677777764
No 21
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.46 E-value=75 Score=20.67 Aligned_cols=67 Identities=10% Similarity=0.133 Sum_probs=39.5
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHHHHHHHhCCHHHHhhccceeeecceeeeeeeeCHHHHHhhh----CCCcccceEecC
Q 029048 81 LIVMEFPKD-PAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFK----GDKYVNGEIIPC 155 (200)
Q Consensus 81 LVvMd~P~~-~~pSr~EmId~Yv~TLAkVLGSEEEAKkkIYsvSt~tyfGF~c~IdEE~S~KLk----Gd~~VnG~IvPr 155 (200)
++.+|.|+. +-.+.++|.+.|+..+.++++-+ +-.|.-.| +|+.|-=+.+.++. +...+++.+...
T Consensus 52 v~~~d~~g~~~~~~~~~~a~~~~~~~~~~~~~~---~~~lvGhS------~Gg~vA~~~A~~~p~~~~~v~~l~~~~~~~ 122 (286)
T d1xkta_ 52 TYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEG---PYRVAGYS------YGACVAFEMCSQLQAQQSPAPTHNSLFLFD 122 (286)
T ss_dssp EEEECCCTTSCCSCHHHHHHHHHHHHHHHCCSS---CCEEEEET------HHHHHHHHHHHHHHHC------CCEEEEES
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCC---ceEEeecC------CccHHHHHHHHHHHHcCCCceeEEEeeccc
Confidence 567898875 34578999999999888888631 11122223 46666666666554 444556544444
Q ss_pred C
Q 029048 156 T 156 (200)
Q Consensus 156 p 156 (200)
+
T Consensus 123 ~ 123 (286)
T d1xkta_ 123 G 123 (286)
T ss_dssp C
T ss_pred c
Confidence 3
No 22
>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}
Probab=20.17 E-value=36 Score=21.27 Aligned_cols=22 Identities=14% Similarity=0.178 Sum_probs=19.0
Q ss_pred CCCHHHHHHHHHHHHHHHhCCH
Q 029048 91 APTREQMIETYLNTLATVLGSM 112 (200)
Q Consensus 91 ~pSr~EmId~Yv~TLAkVLGSE 112 (200)
.-+.+|+++..++.|++++|..
T Consensus 66 ~l~~~~~~~~~l~~L~~~~~~~ 87 (112)
T d1b5qa2 66 QQSDEQTKAEIMQVLRKMFPGK 87 (112)
T ss_dssp TSCHHHHHHHHHHHHHHHCTTS
T ss_pred hCCHHHHHHHHHHHHHHHhCcc
Confidence 4478999999999999999853
No 23
>d1spga_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Fish (Leiostomus xanthurus) [TaxId: 59837]}
Probab=20.07 E-value=30 Score=23.52 Aligned_cols=30 Identities=3% Similarity=0.054 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHHHHhCC-----HHHHhhcccee
Q 029048 93 TREQMIETYLNTLATVLGS-----MEEAKKNMYAF 122 (200)
Q Consensus 93 Sr~EmId~Yv~TLAkVLGS-----EEEAKkkIYsv 122 (200)
--+.|-++.+.+|+.+||. .++|=.|+|++
T Consensus 99 ~f~~~~~~ll~~l~~~lg~~~t~e~~~AW~k~~~~ 133 (143)
T d1spga_ 99 NFKILAHNIILVISMYFPGDFTPEVHLSVDKFLAC 133 (143)
T ss_dssp HHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHH
Confidence 3467889999999999994 46788888874
Done!