Citrus Sinensis ID: 029050

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Protein Sequence
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEccEEcccccccEEcEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHHccccEEEccccccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEcccccEEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEEEEEccccccHHHHHccccccccccccccEEEEEEEEEEcccEEEEEEccccccccccccEEEEEEEEEccHHHHHHHHHHHcccEEccccHHHcccccHccccccccEEEEEcccccccccccccHccccccEEEEEccHHHHHHHHHHcccEEEEEccccEEEEEcccccccEEEEEEcc
Coil and Loop (DISEMBL)
macvltpataipvrhqvnRLSVNFTLTytssqfyqtttvrkcrcngqflttkAKMSveggilkkepirdsdkidygvVSVHHVGILCENLERSLEFYQNILGLeinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
macvltpataipvrhqvnRLSVNFTLTYTSsqfyqtttvrkcrcngqflttkakmsveggilkkepirdsdkIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MACVLTPATAIPVRHQVNRLSVNFtltytssqfyqtttVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
**CVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
*********A*PVRH*V*************************************************************SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
****LTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	200	2.2.26 [Sep-21-2011]
P45871	128	Uncharacterized protein Y	yes	no	0.59	0.921	0.298	7e-07
Q96PE7	176	Methylmalonyl-CoA epimera	yes	no	0.515	0.585	0.304	3e-05
Q9D1I5	178	Methylmalonyl-CoA epimera	yes	no	0.555	0.623	0.256	0.0003

>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1

 Score = 53.9 bits (128), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 137
           S+HH+ I+C + E+S  FY + LG + I E    ++  Y+      G+ +I L   P+P 
Sbjct: 5   SIHHIAIICSDYEKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPP 64

Query: 138 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANAL 193
               RPE  G  RH    +  + K    L + GI      T   +G+   F  DPD   L
Sbjct: 65  ERQTRPEAAGL-RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPL 123

Query: 194 EFTQ 197
           E  +
Sbjct: 124 ELYE 127

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q96PE7|MCEE_HUMAN Methylmalonyl-CoA epimerase, mitochondrial OS=Homo sapiens GN=MCEE PE=1 SV=1

 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 135
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    V    ++L    MEL +
Sbjct: 48  LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHG----VSVVFVNLGNTKMELLH 100

Query: 136 P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 184
           P     P++G  +    G   H CI + +++   M L K  I        +   G+P IF
Sbjct: 101 PLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIF 160

Query: 185 TRDPD 189
               D
Sbjct: 161 LHPKD 165

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9D1I5|MCEE_MOUSE Methylmalonyl-CoA epimerase, mitochondrial OS=Mus musculus GN=Mcee PE=2 SV=1

 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVGAEMIHLME-LPN 135
           ++HV +   +LE++  FY+++LG +++E  P   LP  G    ++ +G   + L+  L +
Sbjct: 50  LNHVAVAVPDLEKASSFYRDVLGAQVSEVVP---LPEHGVSVVFVNLGNTKMELLHPLGS 106

Query: 136 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 188
             P++G  +    G   H CI + ++S   M L K  I        +   G+P IF    
Sbjct: 107 DSPITGFLQKNKAGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKIGAHGKPVIFLHPK 166

Query: 189 DANAL 193
           D   +
Sbjct: 167 DCGGV 171

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
388493084	200	unknown [Lotus japonicus]	0.99	0.99	0.685	6e-75
297738629	199	unnamed protein product [Vitis vinifera]	0.995	1.0	0.685	9e-75
225444850	205	PREDICTED: uncharacterized protein ywkD-	0.995	0.970	0.685	1e-74
147789730	205	hypothetical protein VITISV_016330 [Viti	0.995	0.970	0.685	1e-74
359807103	206	uncharacterized protein LOC100805881 [Gl	0.995	0.966	0.676	3e-73
449489903	206	PREDICTED: uncharacterized LOC101203815	0.99	0.961	0.682	7e-73
356547897	209	PREDICTED: uncharacterized protein LOC10	0.99	0.947	0.676	6e-72
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.955	0.969	0.681	1e-71
297796591	196	lactoylglutathione lyase family protein	0.95	0.969	0.681	6e-71
449452528	175	PREDICTED: uncharacterized protein LOC10	0.825	0.942	0.760	4e-69

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  285 bits (729), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 137/200 (68%), Positives = 163/200 (81%), Gaps = 2/200 (1%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L  P+   P+  ++N +S +       S+FY  + V+  RC    ++ KA+++VEG
Sbjct: 1   MASLLRAPSFTSPLHQKLNYVSFSPLTMNLRSKFYHAS-VKNGRCYVPSMSIKAQVAVEG 59

Query: 60  GILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA 119
            +L KE    ++  DYGVVS+HHVGILCENLER L+FYQN+LGLEINEARPHDKLPYRGA
Sbjct: 60  DVLDKESEPINEGSDYGVVSIHHVGILCENLERPLDFYQNVLGLEINEARPHDKLPYRGA 119

Query: 120 WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG 179
           WLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAGISYTLS+SG
Sbjct: 120 WLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSG 179

Query: 180 RPAIFTRDPDANALEFTQVD 199
           RPAIFTRDPDANALEFTQ+D
Sbjct: 180 RPAIFTRDPDANALEFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738629|emb|CBI27874.3| unnamed protein product [Vitis vinifera]

 Score =  285 bits (728), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 137/200 (68%), Positives = 156/200 (78%), Gaps = 1/200 (0%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 1   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 59

Query: 61  ILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW 120
           ++ KE I    K D G+VS+HHVGILCENLERS +FY N+LG  +NEARP+DKLPYRGAW
Sbjct: 60  VMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAW 119

Query: 121 LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR 180
           LWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGR
Sbjct: 120 LWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGR 179

Query: 181 PAIFTRDPDANALEFTQVDG 200
           PAIFTRDPDANALEF QVD 
Sbjct: 180 PAIFTRDPDANALEFVQVDA 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444850|ref|XP_002281014.1| PREDICTED: uncharacterized protein ywkD-like [Vitis vinifera]

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/200 (68%), Positives = 156/200 (78%), Gaps = 1/200 (0%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 7   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 65

Query: 61  ILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW 120
           ++ KE I    K D G+VS+HHVGILCENLERS +FY N+LG  +NEARP+DKLPYRGAW
Sbjct: 66  VMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAW 125

Query: 121 LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR 180
           LWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGR
Sbjct: 126 LWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGR 185

Query: 181 PAIFTRDPDANALEFTQVDG 200
           PAIFTRDPDANALEF QVD 
Sbjct: 186 PAIFTRDPDANALEFVQVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789730|emb|CAN63060.1| hypothetical protein VITISV_016330 [Vitis vinifera]

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/200 (68%), Positives = 156/200 (78%), Gaps = 1/200 (0%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 7   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 65

Query: 61  ILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW 120
           ++ KE I    K D G+VS+HHVGILCENLERS +FY N+LG  +NEARP+DKLPYRGAW
Sbjct: 66  VMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAW 125

Query: 121 LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR 180
           LWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGR
Sbjct: 126 LWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGR 185

Query: 181 PAIFTRDPDANALEFTQVDG 200
           PAIFTRDPDANALEF QVD 
Sbjct: 186 PAIFTRDPDANALEFVQVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 136/201 (67%), Positives = 163/201 (81%), Gaps = 2/201 (0%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L +P+   P+  ++N +S +   T   S+F + + VR  R +   LT K++ +VEG
Sbjct: 7   MASLLKSPSFLSPLNQKLNYVSFSPMTTNLQSKFCRAS-VRNGRWHVPSLTIKSQAAVEG 65

Query: 60  GILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA 119
            +L+KE +  +++ DYGVV +HHVGILCENLERSLEFYQN+LGL+INEARPHDKLPYRGA
Sbjct: 66  DVLEKESVSINEESDYGVVCMHHVGILCENLERSLEFYQNVLGLKINEARPHDKLPYRGA 125

Query: 120 WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG 179
           WLWVG+EMIHLMELPNPDPL+GR +HGGRDRHTCIAIRDVSKLK I DKAGI YTLS SG
Sbjct: 126 WLWVGSEMIHLMELPNPDPLTGRAQHGGRDRHTCIAIRDVSKLKAIFDKAGIPYTLSHSG 185

Query: 180 RPAIFTRDPDANALEFTQVDG 200
           RPAIF RDPDANALEFTQVDG
Sbjct: 186 RPAIFARDPDANALEFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  278 bits (712), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 142/208 (68%), Positives = 161/208 (77%), Gaps = 10/208 (4%)

Query: 1   MACVL---TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRK---CRCNGQFLTTKAK 54
           MA +L   TP + I +R +VN    NF+   T+S F +   + +   C  +G   TT+AK
Sbjct: 1   MASLLSLSTPPSPINLRRKVNL--PNFSSISTNSSFKKHGKIERVGGCGYHGSCFTTRAK 58

Query: 55  MSVEGGILKK--EPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD 112
             +E  +L+K  EPI    + DYG V VHHVG+LCENLERSL FY NILGL+INEARPHD
Sbjct: 59  GGIEQDVLEKDKEPIEIDVENDYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHD 118

Query: 113 KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS 172
           KLPYRGAWLWVGAEMIHLMELPNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI 
Sbjct: 119 KLPYRGAWLWVGAEMIHLMELPNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIP 178

Query: 173 YTLSKSGRPAIFTRDPDANALEFTQVDG 200
           YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 179 YTLSKSGRPAIFTRDPDANALEFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  275 bits (704), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 136/201 (67%), Positives = 162/201 (80%), Gaps = 3/201 (1%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L  P+   P+  ++N    +F+     S+FY  + VR  R N   +T KA+ +VEG
Sbjct: 9   MAFLLKAPSFLPPLNQKLNYTHKSFSPINLQSKFYHAS-VRNGRWNVPSMTIKAQAAVEG 67

Query: 60  GIL-KKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG 118
            +L  +E I  +++ DYGVV +HHVGILCENLERSL+FYQN+LGL+INEARPH+KLPYRG
Sbjct: 68  DVLLDEESICVNEESDYGVVCMHHVGILCENLERSLDFYQNVLGLKINEARPHNKLPYRG 127

Query: 119 AWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS 178
           AWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I DKAGI+YTLS S
Sbjct: 128 AWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAIFDKAGIAYTLSHS 187

Query: 179 GRPAIFTRDPDANALEFTQVD 199
           GRPAIFTRDPDANALEFTQVD
Sbjct: 188 GRPAIFTRDPDANALEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 139/204 (68%), Positives = 166/204 (81%), Gaps = 13/204 (6%)

Query: 1   MACVLTPATA-IPVRHQVNRLSVNFTLTYTSSQF-YQTTTVRKCRCNGQFLTTKAKM--- 55
           MA +  P++A + +R +V  +  N +   T  +F +Q  +VRK R N +F + KAK    
Sbjct: 1   MASIFRPSSASLDLRPKV--ICTNLS---TKERFEFQKKSVRKERINVRFYSLKAKAQGS 55

Query: 56  SVEG-GILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL 114
           S+EG  +++++ +  ++K DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKL
Sbjct: 56  SIEGISVVQEKEL--NNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKL 113

Query: 115 PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 174
           PYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT
Sbjct: 114 PYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYT 173

Query: 175 LSKSGRPAIFTRDPDANALEFTQV 198
           +SKSGRPAIFTRDPDANALEFTQV
Sbjct: 174 MSKSGRPAIFTRDPDANALEFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 139/204 (68%), Positives = 161/204 (78%), Gaps = 14/204 (6%)

Query: 1   MACVLTPATAIPVRHQV--NRLSVNFTLTYTSSQF-YQTTTVRKCRCNGQFLT---TKAK 54
           MA +  P+ +  +R +V   +LS       T  +F +Q  ++RK R N +F +    KA+
Sbjct: 1   MASIFRPSASFDLRPKVICKKLS-------TRERFEFQKKSLRKERINVRFCSLKANKAQ 53

Query: 55  MSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL 114
            S+EG I   E  + ++K DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKL
Sbjct: 54  GSIEG-ISVVEEKQLNNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKL 112

Query: 115 PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 174
           PYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT
Sbjct: 113 PYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYT 172

Query: 175 LSKSGRPAIFTRDPDANALEFTQV 198
           +SKSGRPAIFTRDPDANALEFTQV
Sbjct: 173 MSKSGRPAIFTRDPDANALEFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  266 bits (679), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 127/167 (76%), Positives = 139/167 (83%), Gaps = 2/167 (1%)

Query: 36  TTTVRKCRCNGQFLTTKAKMSVEGGILKK--EPIRDSDKIDYGVVSVHHVGILCENLERS 93
              + +   +G   TT+AK  +E  +L+K  EPI    + DYG V VHHVG+LCENLERS
Sbjct: 9   VVVIMEVALHGSCFTTRAKGGIEQDVLEKDKEPIEIDVENDYGAVGVHHVGVLCENLERS 68

Query: 94  LEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC 153
           L FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL+GRPEHGGRDRHTC
Sbjct: 69  LHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLTGRPEHGGRDRHTC 128

Query: 154 IAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 200
           + IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 129 LGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANALEFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.79	0.802	0.786	9.4e-66
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.605	0.724	0.304	1.9e-12
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.605	0.695	0.304	1e-11
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.585	0.914	0.344	1.3e-11
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.58	0.630	0.296	8e-09
UNIPROTKB|Q9KL58	127	VC_A0890 "Glyoxylase I family	0.575	0.905	0.296	1.1e-07
TIGR_CMR|VC_A0890	127	VC_A0890 "glyoxylase I family	0.575	0.905	0.296	1.1e-07
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.585	0.914	0.284	3.8e-07
UNIPROTKB|E2REA1	189	MCEE "Uncharacterized protein"	0.55	0.582	0.285	5.2e-06
UNIPROTKB|Q96PE7	176	MCEE "Methylmalonyl-CoA epimer	0.55	0.625	0.293	1.2e-05

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 129/164 (78%), Positives = 145/164 (88%)

Query:    39 VRKCRCNGQFLTTKAKM---SVEG-GILKKEPIRDSDKIDYGVVSVHHVGILCENLERSL 94
             VRK R N +F + KAK    S+EG  +++++ +  ++K DYGVV VHHVG+LCENLERSL
Sbjct:    36 VRKERINVRFYSLKAKAQGSSIEGISVVQEKEL--NNKTDYGVVGVHHVGLLCENLERSL 93

Query:    95 EFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI 154
             EFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CI
Sbjct:    94 EFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACI 153

Query:   155 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 198
             AIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct:   154 AIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:    77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
             + S++H+ +LC ++E S+ FYQN+LG  +   RP D   + GAWL+     IHL++ P P
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEP 68

Query:   137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDAN 191
             + L  + E   +D H       +  ++  L +  I Y    + + G     +F  DPDA 
Sbjct:    69 EKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAF 128

Query:   192 ALEFTQVD 199
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:    77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
             + S++HV +LC +++ S+ FYQ +LG  I   RP + L + GAWL+     IHL+  P P
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEP 68

Query:   137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDAN 191
             + L  +     +D H       +  ++  L++ GI Y   L + G      +F  DPD  
Sbjct:    69 EKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGF 128

Query:   192 ALEFTQVD 199
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 43/125 (34%), Positives = 61/125 (48%)

Query:    80 VHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPD 137
             VHHV I+C N E S +FY  ILG + INE    ++  Y+   L VG E  I L   PNP 
Sbjct:     6 VHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPP 64

Query:   138 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANAL 193
                  PE  G  RH   A+ ++ +    L + G+     +    +G+  +F +DPD   L
Sbjct:    65 KRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPL 123

Query:   194 EFTQV 198
             E  +V
Sbjct:   124 ELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 8.0e-09, P = 8.0e-09
 Identities = 37/125 (29%), Positives = 61/125 (48%)

Query:    77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
             +++++HV  LC+++++SLEFY  +LG  +   RP     + GAWL+     IHL++  + 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGF-VEIERPAS-FDFDGAWLFNYGVGIHLVQAKDQ 75

Query:   137 DPLSGRPEH-GGRDRHTCIAIRDVSKLKMILDKAGISY---TLSKSGRPAI---FTRDPD 189
             D L    +H    D H      D+  L+  L +  + Y   T+      AI   F  DPD
Sbjct:    76 DKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPD 135

Query:   190 ANALE 194
                +E
Sbjct:   136 GFMVE 140

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q9KL58 VC_A0890 "Glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    80 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:   137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 192
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   193 LEFTQ 197
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0890 VC_A0890 "glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    80 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:   137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 192
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   193 LEFTQ 197
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:    80 VHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
             +HHV I+C + E+S +FY  ILG +I  E    D+  ++          I L   P+   
Sbjct:     5 IHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPDAPK 64

Query:   139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI---SYTLSK-SGRPAIFTRDPDANALE 194
                 PE  G  RH    + +V  +   L   G+   S  + + +G+   F  DPD   LE
Sbjct:    65 RPSFPEAQGL-RHLAFNVENVEAVSQYLTNLGVDVESIRVDEYTGKQFTFFSDPDGLPLE 123

Query:   195 FTQ 197
               Q
Sbjct:   124 LYQ 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|E2REA1 MCEE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 135
             ++H+ +   +LE++  FY+NILG +I+E  P   LP  G    ++ +G   + L+  L N
Sbjct:    61 LNHIAVAVPDLEKAKAFYKNILGAQISEVVP---LPEHGVSVVFVNLGNTKMELLHPLGN 117

Query:   136 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 187
               P++G  +    G   H CI + D++   M L +  I  +LS+       G+P IF   
Sbjct:   118 DSPIAGFLQKNKAGGMHHICIEVDDINAAVMDLKEKNIR-SLSEETKIGAHGKPVIFLHP 176

Query:   188 PDANAL 193
              D   +
Sbjct:   177 KDCGGI 182

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

UNIPROTKB|Q96PE7 MCEE "Methylmalonyl-CoA epimerase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query:    80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 135
             ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G   + L+  L  
Sbjct:    48 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGR 104

Query:   136 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 187
               P++G  +    G   H CI + +++   M L K  I  +LS+       G+P IF   
Sbjct:   105 DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIR-SLSEEVKIGAHGKPVIFLHP 163

Query:   188 PDANAL 193
              D   +
Sbjct:   164 KDCGGV 169

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IDA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0019626 "short-chain fatty acid catabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016519001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (199 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	200
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-35
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	4e-13
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-12
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	7e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-11
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	2e-11
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-08
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	5e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	1e-07
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	2e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	6e-06
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	1e-05
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	1e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	2e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	6e-04
cd08357	125	cd08357, Glo_EDI_BRP_like_18, This conserved domai	0.002
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	0.002
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	0.003

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  120 bits (303), Expect = 2e-35
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP 138
           + HV +   +LE S  FY ++LGLE     P     + GAWL+ G    +HL+E   PD 
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDA 57

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 195
           L   PE  GRD H    + D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 58  L---PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 62.8 bits (153), Expect = 4e-13
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           + HV +   +LE+SL+FY ++LG ++ E     + P R A+   G  ++ L+    P P 
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 140 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 195
           +              ++ DV      L  AG+           G    + RDPD N +E 
Sbjct: 62  AAGFGGHHI-AFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 141
           HVG+   +LE ++ FY+++LG E+      D      A+L +G   + L E   P     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEV---LERDGGGAEFAFLRLGGTRLELFEGDEP----- 52

Query: 142 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 195
            P  GG   H    + DV      L  AG+         P      + RDPD N +E 
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 59.6 bits (145), Expect = 7e-12
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 88  ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 145
           ++LE +  FY+++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 146 GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 195
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 18/136 (13%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL------ 133
           +HHV +   +LE S++FY ++LGL + +   ++     G  L          EL      
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 134 -------PNPDPLSGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRPA- 182
                     D   G P       H    + D          LD  G+   L + GR   
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 183 -IFTRDPDANALEFTQ 197
            ++ RDPD   +E   
Sbjct: 123 HVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 137
            +HHV I+C +  RS EFY  +LGL +  E    ++  Y+      G   I L   PNP 
Sbjct: 3   GIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEYQIELFSFPNPP 62

Query: 138 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--------YTLSKSGRPAIFTRDPD 189
           P    PE  G  RH   A+ D+      L   G+         +T    G+   F  DPD
Sbjct: 63  PRPSYPEACGL-RHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFT----GKRFTFFYDPD 117

Query: 190 ANALEFTQ 197
              LE  +
Sbjct: 118 GLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 49.7 bits (119), Expect = 3e-08
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 85  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 144
           +   +LE +  FY+ +LG E+ E    +   +R   +      I L+ LP PD       
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEE-EDGEYAEFRLGLVLALGGFIELIGLPEPDA------ 53

Query: 145 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 195
            GG   H    + D+  L   L  AG +        P      + RDPD N +E 
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 49.5 bits (118), Expect = 5e-08
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELP 134
           G+  VHH+ I+  +   S  FY +ILG    +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 135 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 190
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDG 121

Query: 191 NALEFTQ 197
             LE  +
Sbjct: 122 LPLELYE 128

Length = 129

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 80  VHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRGAWLWVGAEMIHLMELP 134
           +HHV ++  + + +++FY ++LGL      +N+  P     + G  L     ++   E P
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 135 NPDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPD 189
           +  P  GR   G    H   ++   + L   +  L  AG+  +  + + G  +++  DPD
Sbjct: 62  DAGP-KGRRGPGQI-HHIAFSVPSEASLEAWRERLRAAGVPVSGVVDRFGERSLYFEDPD 119

Query: 190 ANALEFT 196
              LE T
Sbjct: 120 GIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 15/128 (11%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +  + HV +   ++E +L+FY  +LG+E+               L  G++ I+L  +   
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKA----LRFGSQKINLHPVGGE 56

Query: 137 -DPLSGRPEHGGRDRHTCIAI-RDVSKLKMILDKAGISYTLSKSGR-------PAIFTRD 187
            +P +G P   G D   C+     + +L   L+  G+        R        +++ RD
Sbjct: 57  FEPAAGSPGP-GSD-DLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRD 114

Query: 188 PDANALEF 195
           PD N +E 
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 43.3 bits (103), Expect = 6e-06
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH-LMELP-NPDPL 139
           H  +  ++LE+SL+FY ++LG+++   +   +  +   +L    E    ++EL  N    
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG-- 60

Query: 140 SGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPD 189
           +  P   G    H   A+ DV      L++ G+  T           A F +DPD
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIA-FIKDPD 114

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 140
           HH+GI+  +L+ +  F+ ++LGL        +      A+  +G      +EL  P    
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGE 60

Query: 141 GRPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTR 186
              +  G    H    + D+      L+  G+          A   R
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRR 107

Length = 110

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 138
           + HVGI   +LE + +FY+++LG +++E     +   +  ++ +G   + L+E    D P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 139 LSGRPE-HGGRDRHTCIAIRDVSKLKMILDKAGI 171
           ++   E +GG   H  I + D+      L + G+
Sbjct: 62  IAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGV 95

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 89  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-- 146
           +LERSL FYQ++LGLE+ E           A L  G     L+ L   DP +     G  
Sbjct: 12  DLERSLAFYQDVLGLEVLERTDS------TAVLGTG-GKRPLLVL-EEDPDAPPAPPGTT 63

Query: 147 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 195
           G   H  I +   + L   L        L + G P           A++  DP+ N +E 
Sbjct: 64  GLY-HFAILLPSRADLARAL------RRLIELGIPLEGASDHLVSEALYLSDPEGNGIEI 116

Query: 196 T 196
            
Sbjct: 117 Y 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.9 bits (89), Expect = 6e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 80  VHHVGILCENLERSLEFYQNILGL---EINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           + H+GI   +LE +L+FY+++LG+   E  E      +  R A+L +G   I L+E  + 
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGV--RLAFLGLGNVQIELIEPLDD 58

Query: 137 DP 138
           D 
Sbjct: 59  DS 60

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176705 cd08357, Glo_EDI_BRP_like_18, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-----GAEMI-HLMELP 134
            H+ I   +LE +  FY ++LG    E R  +         WV     G +++ HL   P
Sbjct: 1   FHLAIPVRDLEAARAFYGDVLGC--KEGRSSET--------WVDFDFFGHQLVAHLS--P 48

Query: 135 NPDPLSGRPEHGGRD---RHTCIAIR--DVSKLKMILDKAGISYTLSKS----GRP---- 181
           N +  +      G      H  + +   +   L   L+ AG+ + +       G+P    
Sbjct: 49  NFNADASDNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQE 108

Query: 182 AIFTRDPDANALEF 195
             F +DP  NALEF
Sbjct: 109 TFFLKDPSGNALEF 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 79  SVHHVGILCENLERSLEFYQNILGL 103
            +HHV +   +LERS  FY  +LGL
Sbjct: 1   GIHHVELTVRDLERSRAFYDWLLGL 25

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 16/119 (13%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
            ++H+ +   +LERS+ FY ++LG      + H +   +GA+L  G   + L    N  P
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF-----KLHVRWD-KGAYLEAGDLWLCLSVDANVGP 54

Query: 139 LSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALE 194
                       H   ++   D + LK  L +AG+  +  + S   + +  DPD + LE
Sbjct: 55  AK-------DYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLE 106

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	200
PLN02367	233	lactoylglutathione lyase	99.87
PRK11478	129	putative lyase; Provisional	99.85
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.85
PLN03042	185	Lactoylglutathione lyase; Provisional	99.84
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.83
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.83
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.82
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.82
PLN02300	286	lactoylglutathione lyase	99.82
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.81
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.81
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.81
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.81
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.81
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.8
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.8
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.8
PRK10291	129	glyoxalase I; Provisional	99.79
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.78
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.78
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.78
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.78
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.78
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.77
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.77
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.77
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.77
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.77
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.76
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.76
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.76
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.76
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.76
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.76
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.76
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.75
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.75
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.75
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.75
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.75
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.75
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.75
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.75
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.75
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.74
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.74
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.74
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.74
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.73
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.73
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.72
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.72
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.72
PRK06724	128	hypothetical protein; Provisional	99.71
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.71
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.7
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.7
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.7
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.69
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.69
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.69
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.69
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.68
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.68
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.68
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.68
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.67
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.67
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.67
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.64
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.64
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.64
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.62
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.62
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.61
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.61
PLN02300	286	lactoylglutathione lyase	99.56
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.55
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.44
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.42
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.33
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.3
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.29
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.27
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.23
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.15
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.1
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.08
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.06
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.89
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.86
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.77
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.72
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.62
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.4
PRK10148	147	hypothetical protein; Provisional	98.35
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.32
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.28
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.25
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.92
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.22
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.19
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.02
PF15067	236	FAM124: FAM124 family	97.0
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.01
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.53
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	94.44
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	91.99
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	90.92
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	90.37
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	90.16
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	89.85
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	89.72
PLN02367	233	lactoylglutathione lyase	89.61
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	89.33
PRK11478	129	putative lyase; Provisional	88.17
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	87.82
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	86.12
PRK10291	129	glyoxalase I; Provisional	86.02
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	85.5
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	85.4
PLN03042	185	Lactoylglutathione lyase; Provisional	85.32
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	84.11
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	83.83
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	83.77
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	83.74
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	83.62
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	83.06
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	82.75
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	80.37

>PLN02367 lactoylglutathione lyase

Probab=99.87  E-value=3.8e-20  Score=146.29  Aligned_cols=123  Identities=15%  Similarity=0.192  Sum_probs=96.3

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-------------------CeEEEEEecCCCC
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPNPD  137 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-------------------~~~~~l~~~~~~~  137 (200)
                      -..++|++|+|+|++++++||+++|||++..+...++.++..+||..+                   +..++|....+.+
T Consensus        73 ~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e  152 (233)
T PLN02367         73 GYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTE  152 (233)
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCC
Confidence            347999999999999999999999999999888777777788888532                   2368887655433


Q ss_pred             C--CCCCCC----CCCceeEEEEEECCHHHHHHHHHHCCCeEEecCC---CceEEEEECCCCCeEEEEEeC
Q 029050          138 P--LSGRPE----HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       138 ~--~~~~~~----~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .  ......    ...+..||||.|+|+++++++|+++|+++...+.   +.+.+||+|||||+|||+|..
T Consensus       153 ~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        153 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             ccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence            1  111111    1247899999999999999999999999976432   245789999999999999864

>PRK11478 putative lyase; Provisional

Probab=99.85  E-value=7.5e-20  Score=132.69  Aligned_cols=122  Identities=23%  Similarity=0.358  Sum_probs=87.9

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      +.+.+++||+|.|+|++++++||+++|||++......+........+.. ++..++++..+.+...... ....+..|++
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~hi~   80 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSR-PEACGLRHLA   80 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCC-CCCCceeEEE
Confidence            4577899999999999999999999999998753221111111112333 4457777765433221111 1234578999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          154 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |.|+|+++++++|+++|+++...    ..|.+.+||+|||||.|||+|
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999998643    246788999999999999987

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.85  E-value=7.3e-20  Score=135.16  Aligned_cols=121  Identities=21%  Similarity=0.338  Sum_probs=90.0

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----------CCceEEEEEe--CCeEEEEEecCCCCCCC---
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV--GAEMIHLMELPNPDPLS---  140 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~--g~~~~~l~~~~~~~~~~---  140 (200)
                      |.+++||+|.|+|++++++||++ |||++..+.....           ......++..  ++..++|+....+....   
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46899999999999999999999 9999875543211           1123345543  44588888754332211   


Q ss_pred             CCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEe
Q 029050          141 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       141 ~~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .....+.+..|+||.|+|+++++++|+++|+++...+    ++.+.+||+||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence            1122345678999999999999999999999986532    467889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.84  E-value=2.6e-19  Score=138.28  Aligned_cols=123  Identities=17%  Similarity=0.212  Sum_probs=92.6

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-------------------CCeEEEEEecCCCC
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNPD  137 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-------------------g~~~~~l~~~~~~~  137 (200)
                      -.+++|++|+|.|+++|++||+++|||++..+...+...+..+++..                   ++..++|+...+..
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~  104 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTE  104 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCc
Confidence            45799999999999999999999999999887655555556666643                   23478887644322


Q ss_pred             C-C-CC----CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecCC---CceEEEEECCCCCeEEEEEeC
Q 029050          138 P-L-SG----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       138 ~-~-~~----~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      . + ..    ....+.++.|++|.|+|+++++++|+++|+++...+.   +.+.+||+|||||+|||++..
T Consensus       105 ~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        105 SDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             ccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            1 0 00    1112246889999999999999999999999875432   345688899999999999864

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=2e-19  Score=129.17  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=85.9

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  157 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  157 (200)
                      +++||.|.|+|++++++||+++|||+..........++...|+..+ +..++++..+...... ......+..|+||.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            4789999999999999999999999986543322333455677764 4578887654332211 1222346789999996


Q ss_pred             ---CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEE
Q 029050          158 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       158 ---dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~  196 (200)
                         |+++++++|+++|+++...+    .|.+.++|+|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence               58999999999999986532    3456688999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.83  E-value=3.2e-19  Score=135.29  Aligned_cols=122  Identities=22%  Similarity=0.273  Sum_probs=90.1

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeec----CC--------------CCCCceEEEEEeCC-eEEEEEecCCCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEAR----PH--------------DKLPYRGAWLWVGA-EMIHLMELPNPDP  138 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~----~~--------------~~~~~~~~~l~~g~-~~~~l~~~~~~~~  138 (200)
                      ++++||+|.|+|+++|++||+++|||++..+.    ..              .......+++..++ ..++|+...+...
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            57999999999999999999999999886321    10              01113456676654 4799998765433


Q ss_pred             CCCC-CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC-----C---CceEEEEECCCCCeEEEEEeC
Q 029050          139 LSGR-PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S---GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       139 ~~~~-~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~-----~---g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +... ...+.+..|+||.|+|+++++++++++|+++....     .   +.+.+||+|||||.|||++.+
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            2222 12345789999999999999999999998763321     1   247899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=8.5e-19  Score=125.61  Aligned_cols=119  Identities=27%  Similarity=0.436  Sum_probs=86.8

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      .+++||+|.|.|++++++||+++|||++..............++.. ++..++++...........+ ...+..|++|.|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~-~~~g~~h~~~~v   80 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYP-EACGLRHLAFSV   80 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCC-cCCCceEEEEEe
Confidence            5799999999999999999999999999765322221112223333 45577777654432211112 234678999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          157 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +|+++++++++++|+++...    ..+.+.+|++||+||+|||.|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            99999999999999988653    235678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.82  E-value=4.9e-19  Score=130.31  Aligned_cols=118  Identities=12%  Similarity=0.039  Sum_probs=88.5

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCC--CCCCCCceeEEEEEEC
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIR  157 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~f~v~  157 (200)
                      ++|+.|.|+|++++++||+++|||++......+  .....++..++..+.+...........  ....+.+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            589999999999999999999999998765432  123455555666677665333221101  1224456789999999


Q ss_pred             CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          158 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       158 dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+++++++++++|+++...+    .+.+.++++||||++|||+|..
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~  124 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRK  124 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecC
Confidence            99999999999999996432    4568899999999999999854

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN02300 lactoylglutathione lyase

Probab=99.82  E-value=5.5e-19  Score=145.57  Aligned_cols=133  Identities=23%  Similarity=0.274  Sum_probs=99.3

Q ss_pred             eecccCCCCCCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe----EEEEEecCCCCC
Q 029050           63 KKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDP  138 (200)
Q Consensus        63 ~~e~~~~~~~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~~~l~~~~~~~~  138 (200)
                      +.|.....+++.+.|.+++||.|.|+|++++++||+++|||++..+...+...+..+|+..++.    .+.+......  
T Consensus         8 ~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--   85 (286)
T PLN02300          8 AAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV--   85 (286)
T ss_pred             ChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC--
Confidence            4455666788889999999999999999999999999999999875543333445677766532    2333321111  


Q ss_pred             CCCCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC----C-CceEEEEECCCCCeEEEEEeC
Q 029050          139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       139 ~~~~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdGn~iEl~e~~  199 (200)
                        .....+.+..|++|.|+|+++++++++++|+++...+    . +.+.+||+|||||.|||++..
T Consensus        86 --~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         86 --DKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             --CccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence              1122345678999999999999999999999886542    2 246789999999999999864

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.81  E-value=1.1e-18  Score=128.81  Aligned_cols=113  Identities=23%  Similarity=0.361  Sum_probs=88.2

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +|.+++||.|.|+|++++++||+++|||++..+.+      ..+++..++..+.+...+...    ......+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g~~l~l~~~~~~~----~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNGLWIALNEEKDIP----RNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCCeEEEeeccCCCC----CccCCCCeeEEEEE
Confidence            46789999999999999999999999999976432      346777777777665432211    11123456899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEe
Q 029050          156 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       156 v~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++  |+++++++++++|+++...+    .+++.+||+|||||+|||.+.
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            98  99999999999999985432    367999999999999999874

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.81  E-value=1.4e-18  Score=124.23  Aligned_cols=114  Identities=21%  Similarity=0.315  Sum_probs=86.4

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC----eEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      |+||.|.|+|++++++||+++||+++......+......+|+..++    ..+++........   ....+.+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            5799999999999999999999999987654333334556777654    3566554322211   11223457899999


Q ss_pred             ECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEE
Q 029050          156 IRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       156 v~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~  196 (200)
                      ++|+++++++++++|+++...+   .+++.+||+|||||+|||+
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            9999999999999999997654   3567899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.81  E-value=1.5e-18  Score=129.83  Aligned_cols=123  Identities=23%  Similarity=0.316  Sum_probs=87.6

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe----EEEEEecCCCCCCCCCCCCCCc
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGR  148 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~~~l~~~~~~~~~~~~~~~~~~  148 (200)
                      +.-.+++++||.|.|.|++++++||+++|||++..+..........+++..++.    .+.+.......    ....+.+
T Consensus        11 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~g   86 (150)
T TIGR00068        11 PKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTE----KYDLGNG   86 (150)
T ss_pred             cccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCC----cccCCCc
Confidence            344577999999999999999999999999998765543333334455554422    23332211111    1112346


Q ss_pred             eeEEEEEECCHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEeC
Q 029050          149 DRHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       149 ~~hi~f~v~dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ..|++|.|+|+++++++|+++|+++...+     .+.+.+||+|||||+|||++..
T Consensus        87 ~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        87 FGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             eeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            78999999999999999999999875432     2346789999999999999864

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.9e-18  Score=123.75  Aligned_cols=117  Identities=21%  Similarity=0.373  Sum_probs=88.1

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      |.+++||.|.|+|++++++||+++|||+.....+..    ...++..++..+++......... .......+..|++|.+
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~hi~~~~   75 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGSQKINLHPVGGEFEP-AAGSPGPGSDDLCLIT   75 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCCEEEEEecCCCccCc-CccCCCCCCceEEEEe
Confidence            468999999999999999999999999998654321    23456777777777664432211 1122334568999999


Q ss_pred             C-CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEe
Q 029050          157 R-DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       157 ~-dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      + ++++++++++++|+++...+       .+++.+||+|||||+||++++
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            7 49999999999999885432       235789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.81  E-value=5.7e-19  Score=127.52  Aligned_cols=119  Identities=20%  Similarity=0.400  Sum_probs=88.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCC--CCCCCCceeEEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  156 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~f~v  156 (200)
                      +++|+.|.|+|++++++||+++|||+..............+++..++..++|...........  ....+.+..|+||.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            478999999999999999999999998765433333446677878878888876432221111  011245678999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec-C----CCceEEEE--ECCCCCeEEEEE
Q 029050          157 RDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQ  197 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DPdGn~iEl~e  197 (200)
                      +|+++++++++++|+++..+ +    .|.+.+|+  +||||++||+.|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            99999999999999988643 1    34466677  799999999986

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.80  E-value=2.4e-18  Score=127.89  Aligned_cols=114  Identities=17%  Similarity=0.252  Sum_probs=82.2

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC-ceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      +.+.+++||+|.|+|++++++||+++|||++..+....... ..+.|+..+.. .+.+.....      +  .+++.|+|
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~~------~--~~~~~Hia   72 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVGG------P--DGKLHHFS   72 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEecC------C--CCCceEEE
Confidence            35678999999999999999999999999986654221111 23567765543 222221111      1  24578999


Q ss_pred             EEECCHHH---HHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          154 IAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~dv~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |.|+|+++   +.++|+++|+++..++     .+.+.+||+|||||.|||.+
T Consensus        73 f~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          73 FFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            99998777   5789999999986543     23578999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=1.2e-18  Score=122.35  Aligned_cols=110  Identities=40%  Similarity=0.745  Sum_probs=86.5

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe-EEEEEecCCCCCCCCCCCCCCceeEEEEEECC
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  158 (200)
                      ++|++|.|+|++++++||+++|||++.......   ....|+..++. .+++...+.....   +...++..|++|.++|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCC
Confidence            589999999999999999999999987543321   23467887765 7787765544321   2233456899999999


Q ss_pred             HHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEE
Q 029050          159 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEF  195 (200)
Q Consensus       159 v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl  195 (200)
                      +++++++++++|+++...+   .+.+.+++.|||||+|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999999999986643   466889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.80  E-value=2.9e-18  Score=125.47  Aligned_cols=115  Identities=17%  Similarity=0.279  Sum_probs=85.8

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC-CceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      |.+++||.|.|+|++++++||+++|||+...+.+.... .....|+..++..+.+......        ...+..|++|.
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~Hiaf~   73 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL--------QERTYNHIAFK   73 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC--------CCCCceEEEEE
Confidence            67899999999999999999999999988765432211 1122345556666766532211        11246899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEecC---C-CceEEEEECCCCCeEEEEEeC
Q 029050          156 IR--DVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~--dv~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+  |+++++++|+++|+++....   + +++++||+|||||.|||.+.+
T Consensus        74 v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          74 ISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             cCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecCC
Confidence            98  79999999999999886532   2 368999999999999998753

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK10291 glyoxalase I; Provisional

Probab=99.79  E-value=2.6e-18  Score=125.07  Aligned_cols=111  Identities=23%  Similarity=0.359  Sum_probs=82.0

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe----EEEEEecCCCCCCCCCCCCCCceeEEEEEECCH
Q 029050           84 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  159 (200)
Q Consensus        84 ~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv  159 (200)
                      +|.|+|++++++||+++|||++..+...+...+..+|+..++.    .+++......    .....+.+..|++|.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCC----CCCcCCCCeeEEEEEeCCH
Confidence            4789999999999999999999876655555566777766532    3444321111    1122345678999999999


Q ss_pred             HHHHHHHHHCCCeEEecC----CC-ceEEEEECCCCCeEEEEEe
Q 029050          160 SKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       160 ~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++++++|+++|+++...+    .+ .+.+||+|||||.|||++.
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~  120 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  120 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999999886431    23 3568899999999999985

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.78  E-value=3.7e-18  Score=124.92  Aligned_cols=110  Identities=23%  Similarity=0.399  Sum_probs=85.3

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC--
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  157 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--  157 (200)
                      |+||.|.|+|++++++||+++|||++....+      ..+++..++..+.+...+...    .....++..|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDIP----RNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCCC----cCCcCccceEEEEEecHH
Confidence            5899999999999999999999999875432      234577777777776544221    1112345689999998  


Q ss_pred             CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          158 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       158 dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+++++++++++|+++...+    .+++.+||+|||||+|||.+.+
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            59999999999999985432    3668999999999999999864

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.78  E-value=6.9e-18  Score=127.39  Aligned_cols=113  Identities=17%  Similarity=0.235  Sum_probs=85.2

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC---CeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +++||.|.|+|++++.+||+++|||++..+..     ....|+..+   +..+.++.......   .....+++.|++|.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQPR---GRPGAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCCC---CcccCCceEEEEEE
Confidence            57999999999999999999999999986543     133444444   45777777432211   11122457899999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~d---v~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+|   +++++++|+++|+++....  .+.+++||+|||||.|||++..
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            997   8999999999999864422  3457899999999999999864

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.78  E-value=1.3e-17  Score=127.02  Aligned_cols=118  Identities=22%  Similarity=0.358  Sum_probs=84.7

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      |.|.+++||.|.|+|++++++||+++|||++......+.......|+..++....+........      ..+++.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~------~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAG------ARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCC------CCCCceEEEE
Confidence            6788999999999999999999999999998765433322234577776543222322211111      1235689999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          155 AIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|+|   +++++++|+++|+++...+     .....+|++|||||+|||.+.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            9985   5588999999999985332     123468999999999999986

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2.5e-17  Score=118.64  Aligned_cols=113  Identities=28%  Similarity=0.369  Sum_probs=85.1

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      ++++||.|.|+|++++++||+++|||++....+      ..+++..++  ..+.+...+...   .......+..|++|.
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~f~   71 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDAP---PAPPGATGLYHFAIL   71 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCCeEEEEEEeCCCCC---cccCCCCcEEEEEEE
Confidence            479999999999999999999999999987632      346676665  345555543321   112233457899999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~---dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +.   ++++++++++++|+++....  ...+.+||+|||||+|||.+.-
T Consensus        72 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          72 LPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEec
Confidence            97   58999999999999885432  2347899999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=4.3e-17  Score=117.19  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=85.3

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHHH
Q 029050           83 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  162 (200)
Q Consensus        83 v~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~~  162 (200)
                      ..|.|+|++++++||+++||+++....+.+......+.+..++..+.+.................+..|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            46889999999999999999999876533332223445777777777765443221111112223457999999999999


Q ss_pred             HHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          163 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       163 ~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +++++++|+++...    ++|.+.++++|||||+|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            99999999988643    3567889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.77  E-value=2e-17  Score=119.84  Aligned_cols=108  Identities=19%  Similarity=0.285  Sum_probs=81.8

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      .+.+++||.|.|+|++++.+||+++|||++..+.+      ...|+..++....+......          .+..|++|.
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~i~l~~~~----------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARDHTLVYIEGD----------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCccEEEEEEeCC----------CceEEEEEE
Confidence            57899999999999999999999999999875432      24677776432222221111          134789999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~d---v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |++   +++++++++++|+++....       .+.+.+||+|||||.||+....
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            984   9999999999999886532       3356789999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.9e-17  Score=119.85  Aligned_cols=114  Identities=25%  Similarity=0.346  Sum_probs=86.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhcc---CCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      +++||.|.|+|++++++||+++|   ||++....+.     ...|... ++..+.+......... .......+..|++|
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-----~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-----GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-----CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEE
Confidence            57999999999999999999999   9999876421     2245543 5667888765544322 11123345789999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEe
Q 029050          155 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|.   |+++++++++++|+++....       .+.+.+||+|||||+|||+.+
T Consensus        75 ~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          75 RAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            997   58899999999999986532       256789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.77  E-value=1.4e-17  Score=119.80  Aligned_cols=108  Identities=20%  Similarity=0.278  Sum_probs=82.5

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC-e---EEEEEecCCCCCCCCCCCCCCcee
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-E---MIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~---~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      |.+.+++|+.|.|+|++++++||+++|||++..+.+      ..+|+..++ .   .+.+..  .         ...+..
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~--~---------~~~~~~   64 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTE--S---------PEAGLG   64 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEee--C---------CCCceE
Confidence            567899999999999999999999999999887543      235665532 1   222221  1         113578


Q ss_pred             EEEEEEC---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEEeC
Q 029050          151 HTCIAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       151 hi~f~v~---dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |++|.++   |+++++++++++|+++...   +.++..+||+|||||.||+....
T Consensus        65 h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          65 HIAWRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEec
Confidence            9999997   6889999999999987432   34567899999999999998754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.77  E-value=2.3e-17  Score=118.73  Aligned_cols=108  Identities=16%  Similarity=0.188  Sum_probs=79.8

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-C-eEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      +.+++||.|.|+|++++++||+++|||++....+.     ..+|+... + ....+.....         ...+..|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~---------~~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLREA---------DTAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEeccC---------CCCCeeEEEE
Confidence            67899999999999999999999999998765421     12455542 1 1122221111         1134689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          155 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .+.   |+++++++++++|+++...+     ..++.+||+|||||.|||.+.
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            997   88999999999999986532     235789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.77  E-value=2.3e-17  Score=118.69  Aligned_cols=106  Identities=18%  Similarity=0.225  Sum_probs=80.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC-
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  157 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-  157 (200)
                      +++||.|.|+|+++|++||+++|||++....+.     ..+|+..++..+.+...+..         ..+..|++|.++ 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-----GALYLRMDDRAWRIAVHPGE---------ADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC-----CeEEEEccCCceEEEEEeCC---------CCceeEEEEEECC
Confidence            689999999999999999999999998754221     34677776544434332221         124579999997 


Q ss_pred             --CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEe
Q 029050          158 --DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       158 --dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                        |+++++++|+++|+++...+       .+.+.+||+|||||.||+...
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence              58899999999999987532       234789999999999999854

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=2.3e-17  Score=118.46  Aligned_cols=113  Identities=14%  Similarity=0.140  Sum_probs=76.5

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECC
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  158 (200)
                      ++.|+.|.|+|++++++||+++||+++....+  .   . ..+ .++..+++...............+.+..|++|.|+|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~-~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d   74 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E---N-VTF-EGGFALQEGYSWLEGISKADIIEKSNNFELYFEEED   74 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c---e-EEE-eccceeccchhhhccCCcccccccCCceEEEEEehh
Confidence            68899999999999999999999999865332  1   1 112 122222221110000000111122344799999999


Q ss_pred             HHHHHHHHHHCCC-eEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          159 VSKLKMILDKAGI-SYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       159 v~~~~~~l~~~G~-~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +++++++|+++|+ ++...    ++|.+.++|+|||||+|||.+.
T Consensus        75 vd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          75 FDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            9999999999985 56432    3567899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.76  E-value=3.7e-17  Score=116.39  Aligned_cols=106  Identities=15%  Similarity=0.181  Sum_probs=80.5

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      |.+++||.|.|+|++++++||++ |||+.....+      ..+|+..++....++......        ..+..|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDPFVYVARKGE--------KARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCccEEEEcccCC--------cCcccEEEEEE
Confidence            46899999999999999999999 9999876532      246776644332332221111        13567999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEE
Q 029050          157 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +|.+++.+.+++.|......   +.+++.+||+|||||.|||+.
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999999999999977543   356789999999999999974

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.76  E-value=4.8e-17  Score=115.39  Aligned_cols=109  Identities=17%  Similarity=0.191  Sum_probs=83.0

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC-eEEEEEecCCCCCCCCCCCCCCceeEEEEEECC
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  158 (200)
                      +.||.|.|+|++++++||+++||+++..... ..  ...+++..++ ..+.++......      ...+...|++|.++|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GG--GDYAVFSTGGGAVGGLMKAPEPA------AGSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CC--CceEEEEeCCccEEEEecCCCCC------CCCCCeEEEEEEeCC
Confidence            3799999999999999999999999976543 11  1335566664 355555544332      112345799999999


Q ss_pred             HHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEE
Q 029050          159 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       159 v~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +++++++++++|+++..++    ++++.++|+|||||.|||+|
T Consensus        72 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          72 VDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            9999999999999886542    36688999999999999985

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.1e-17  Score=115.70  Aligned_cols=113  Identities=21%  Similarity=0.303  Sum_probs=81.2

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC---CeEEEEEecCCCCCCCCCCCCCCceeEEEEEECC
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  158 (200)
                      ||.|.|.|++++++||+++|||++........ ......+..+   +..+++........  ......++..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAA--MSGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCccc--cccccCCCceEEEEEehH
Confidence            89999999999999999999999987654211 1222223322   23444443333221  112233456799999999


Q ss_pred             HHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEE
Q 029050          159 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       159 v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +++++++++++|+++...+   .+++.+|++|||||.|||+|
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            9999999999999987543   35689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.76  E-value=2e-17  Score=119.10  Aligned_cols=107  Identities=26%  Similarity=0.413  Sum_probs=82.4

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC-
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  157 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-  157 (200)
                      +++||.|.|+|++++.+||+++|||++....+      ...|+..++..+.+...+...       ...+..|++|.++ 
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~-------~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANVG-------PAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCCC-------CCCCeeeEEEEeCH
Confidence            57999999999999999999999999876543      235676776655554322211       1234689999994 


Q ss_pred             -CHHHHHHHHHHCCCeEEecC-CCceEEEEECCCCCeEEEEEe
Q 029050          158 -DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       158 -dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdGn~iEl~e~  198 (200)
                       |+++++++++++|+++.... ..++.+||+|||||.|||+..
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeC
Confidence             89999999999999885543 345789999999999999864

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.76  E-value=2.3e-17  Score=118.42  Aligned_cols=116  Identities=21%  Similarity=0.406  Sum_probs=84.1

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC-CceEEEEEe----CCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~----g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      +++||.|.|.|++++++||+++|||+.......... .....++..    ++..++|+..+.....  ......+..|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEE
Confidence            478999999999999999999999999876542221 112233332    3446777765443221  112234568999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEE
Q 029050          154 IAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       154 f~v~---dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdGn~iEl~  196 (200)
                      |.++   |+++++++++++|+++...  ..+++.+||+|||||+|||+
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            9998   5799999999999987543  34678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.76  E-value=1e-17  Score=125.81  Aligned_cols=113  Identities=14%  Similarity=0.134  Sum_probs=80.3

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-CCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +++||+|.|+|++++++||+++||+++......+ ......+|+..++.  .+......-.      ...++++.|+||.
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~------~~~~~g~~Hiaf~   74 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALA------QGPESGVHHAAFE   74 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHh------cCCCCceeEEEEE
Confidence            4799999999999999999999999987543322 12235677776532  1111000000      0113568999999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          156 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       156 v~dv~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |+|++++.   ++|+++|+++.+++     .....+|++|||||.|||..
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~  124 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYT  124 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEc
Confidence            99999886   99999999987642     12346799999999999985

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.75  E-value=2.9e-18  Score=123.01  Aligned_cols=117  Identities=25%  Similarity=0.436  Sum_probs=85.3

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC--CCCCceEEEEEeCCeEEEEEecCCCCCCCCCCC-CCCceeEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIA  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~-~~~~~~hi~f~  155 (200)
                      +|+||+|.|+|++++++||+++|||++......  ........++..++..+.+.............. ......|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            689999999999999999999999999987651  222334566777777777776655443221110 00134678887


Q ss_pred             EC---CHHHHHHHHHHCCCeEEecC----C-CceEEEEECCCCCeEEE
Q 029050          156 IR---DVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEF  195 (200)
Q Consensus       156 v~---dv~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdGn~iEl  195 (200)
                      +.   |+++++++|+++|+++...+    . ....+|++|||||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            76   77888999999999987653    2 33446799999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.75  E-value=2.5e-17  Score=118.69  Aligned_cols=118  Identities=22%  Similarity=0.354  Sum_probs=87.9

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-CCCceEEEEEeCCeEEEEEecCCCCCCCC--CCCCCCceeEEEEEE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  156 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~f~v  156 (200)
                      ++||.|.|+|++++.+||+++|||+.....+.. ......+|+..++..+++++.........  ....+.+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999998755432 22345677888888888886543322111  112446678999999


Q ss_pred             CCHHHHHHHHHHCCCeEEecC----CCceEEEEECCC---CCeEEEEE
Q 029050          157 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPD---ANALEFTQ  197 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPd---Gn~iEl~e  197 (200)
                      +|+++++++++++|+++...+    .+++.+++.||+   |++|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999986543    234555555555   99999986

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=4.8e-17  Score=118.36  Aligned_cols=110  Identities=15%  Similarity=0.180  Sum_probs=77.9

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----------CCceEEEEEeC----CeEEEEEecCCCCCCCCCC
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVG----AEMIHLMELPNPDPLSGRP  143 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g----~~~~~l~~~~~~~~~~~~~  143 (200)
                      ++.|++|+|+|+++|++||+++|||++..+...+.           .....+++..+    +..++|....+..+    .
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~----~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGD----Y   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCC----C
Confidence            68999999999999999999999999877554433           11122334432    23566665333221    1


Q ss_pred             CCCCceeEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          144 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       144 ~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ..+.+  |++|.|++. ++.++|+++|+++...+.+  .+|++||||+.|||+-
T Consensus        78 ~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence            22333  677777776 5669999999999876654  8999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.75  E-value=5.2e-17  Score=115.42  Aligned_cols=106  Identities=21%  Similarity=0.305  Sum_probs=83.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ++++|+.|.|+|++++++||+++|||++....+      ..+|+..+ +..+.+.......         .+..|++|.|
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~h~~~~v   65 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSEDDHHSLVLTEGDE---------PGVDALGFEV   65 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCCCcEEEEEEeCCC---------CCceeEEEEc
Confidence            478999999999999999999999999987543      34677776 3443333222211         2468999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEe
Q 029050          157 R---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .   ++++++++++++|+++...+    .+++.+||.||+||.||+...
T Consensus        66 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          66 ASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            7   68899999999999986543    356899999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.75  E-value=6.1e-17  Score=116.86  Aligned_cols=106  Identities=21%  Similarity=0.303  Sum_probs=80.1

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC-eEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      .+++|+.|.|+|++++++||+++|||+.....+      ..+++..++ ..+.+.....          .....|++|.+
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~~~~~~~----------~~~~~h~a~~v   66 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDNGVSLDFAQPDG----------EIPPQHYAFLV   66 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCCCcEEEEecCCC----------CCCcceEEEEe
Confidence            578999999999999999999999999876322      123344433 3455443211          12347999988


Q ss_pred             C--CHHHHHHHHHHCCCeEEec-----------CCCceEEEEECCCCCeEEEEEeC
Q 029050          157 R--DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~--dv~~~~~~l~~~G~~~~~~-----------~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +  |+++++++++++|+++...           .+|++.+||+|||||.|||++.+
T Consensus        67 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          67 SEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            7  6999999999999987432           24679999999999999999864

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=1.5e-16  Score=113.67  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=84.4

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHHH
Q 029050           83 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  162 (200)
Q Consensus        83 v~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~~  162 (200)
                      +.|+|+|++++.+||+++||+++.............+.+..++..+.+........  .......+..|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG--SPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC--CCCCCCCceEEEEEEeCCHHHH
Confidence            56889999999999999999999876543333333455677777777765322111  1112234457999999999999


Q ss_pred             HHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          163 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       163 ~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++++.++|+++..+    .+|.+.++++|||||.|||.+
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999988543    356789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.75  E-value=2.9e-17  Score=116.21  Aligned_cols=106  Identities=23%  Similarity=0.392  Sum_probs=81.2

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC--CH
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV  159 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--dv  159 (200)
                      ||.|.|+|++++++||+++|||++....+      ...|+..++..+.+...+...      ....+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~------~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAGLWICLMEEDSLQ------GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecCeEEEeccCCCcC------CCCCCccEEEEEcCHHHH
Confidence            79999999999999999999999876542      235666676666554432211      12234679999995  79


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          160 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       160 ~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++++++++++|+++...    ..+++.+|++|||||+|||+..+
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  112 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAGT  112 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeCc
Confidence            99999999999998543    13578999999999999999754

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.75  E-value=6.4e-17  Score=115.65  Aligned_cols=108  Identities=21%  Similarity=0.311  Sum_probs=81.3

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      +.+|+|+.|.|+|++++++||+++|||+.....+      ...|+..++...+++......        ..+..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGSEHHILRLRRSD--------RNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCCccEEEEeccCC--------CCCCceEEEEe
Confidence            4689999999999999999999999999875433      245666544333333322111        12357999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEecC------CCceEEEEECCCCCeEEEEEe
Q 029050          157 R---DVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~~------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .   ++++++++++++|+++...+      .+++.++|+||+||.|||+..
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            4   78999999999999986432      356789999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=8.3e-17  Score=115.78  Aligned_cols=115  Identities=17%  Similarity=0.182  Sum_probs=80.5

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCC---CCC---CCCCCCCceeEEE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD---PLS---GRPEHGGRDRHTC  153 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~---~~~---~~~~~~~~~~hi~  153 (200)
                      +.|+.|+|+|++++.+||+++|||+.....+.+    ....+..++..+.+.......   +..   ..+....+..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG----DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC----cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            469999999999999999999999987543321    112233455555554332110   000   1122223346999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          154 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       154 f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |.|+|+++++++++++|+++...    ++|.+.++++|||||.|||.++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            99999999999999999988543    3466789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.74  E-value=1.5e-16  Score=116.19  Aligned_cols=113  Identities=25%  Similarity=0.371  Sum_probs=83.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-C--eEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +++||.|.|+|++++++||+++|||++....+.    ....|+..+ +  ..+.++..+....    .....+..|++|.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~   72 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFE   72 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEE
Confidence            489999999999999999999999998765432    134566655 2  3566655433211    1223456899999


Q ss_pred             ECCHH---HHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEEeC
Q 029050          156 IRDVS---KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~dv~---~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+|.+   +++++|+++|+++...  ..+++.+|++|||||.|||.+..
T Consensus        73 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          73 VDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcC
Confidence            98655   6889999999987653  23468899999999999999753

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.74  E-value=1e-16  Score=117.54  Aligned_cols=106  Identities=20%  Similarity=0.349  Sum_probs=79.9

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--e--EEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~--~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      .+++||.|.|+|++++++||+++|||++.....     ...+|+..++  .  .+.+...+.         ...++.|++
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~---------~~~g~~hia   67 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-----GRGAFLRAAGGGDHHNLFLIKTPA---------PMAGFHHAA   67 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-----CcEEEEECCCCCCCcEEEEecCCC---------CCCcceEEE
Confidence            479999999999999999999999999876543     1356777652  2  344433221         124678999


Q ss_pred             EEECCHHHHH---HHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          154 IAIRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~dv~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |.|+|++++.   ++|+++|+++...+     .+.+.+||+|||||+|||..
T Consensus        68 f~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          68 FEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             EEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence            9999887665   69999999876432     23466899999999999985

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.74  E-value=1.1e-16  Score=121.14  Aligned_cols=112  Identities=21%  Similarity=0.324  Sum_probs=78.1

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  157 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  157 (200)
                      ++++||+|.|+|++++++||+++|||++......+.......|+..++....+.....         .+.++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~---------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG---------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC---------CCCceeEEEEEcC
Confidence            4799999999999999999999999998754332222223466655433222211111         1235789999998


Q ss_pred             C---HHHHHHHHHHCCCeE--EecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          158 D---VSKLKMILDKAGISY--TLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       158 d---v~~~~~~l~~~G~~~--~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |   +++++++|+++|+..  ...+     .+.+.+||+|||||.||+++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            5   778899999999863  2221     234679999999999999853

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.74  E-value=1.1e-16  Score=120.40  Aligned_cols=111  Identities=17%  Similarity=0.294  Sum_probs=82.1

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC---CCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      ++++||.|.|+|++++++||+++|||++.......   ......+|+..++.  .+.+...+.          ..++.|+
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~----------~~g~~Hi   77 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGPG----------PKRIHHL   77 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCCC----------CceeEEE
Confidence            47999999999999999999999999987643221   11234567776542  233332211          2457899


Q ss_pred             EEEECCHH---HHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          153 CIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       153 ~f~v~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +|.|+|.+   +++++|+++|+++...+     .+.+.+|++|||||.|||...
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            99998654   68999999999986532     356889999999999999854

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1.8e-16  Score=113.27  Aligned_cols=109  Identities=17%  Similarity=0.176  Sum_probs=78.4

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCC-CCCCCCCCceeEEEEEECC
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPL-SGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~-~~~~~~~~~~~hi~f~v~d  158 (200)
                      ++.|.|+|++++++||+++|||+.....+      ....+..++.  .+.+......... ...+..+.+ .|++|.|+|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~d   76 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQG-LILNFEVDD   76 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhcccCCce-EEEEEEECC
Confidence            57899999999999999999999986532      2234544443  4444433222111 111223333 599999999


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          159 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       159 v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +++++++++++|+++..+    ++|.+.++++|||||+|||+|
T Consensus        77 id~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          77 VDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            999999999999987543    246689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.73  E-value=2.2e-16  Score=117.49  Aligned_cols=106  Identities=16%  Similarity=0.304  Sum_probs=79.8

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeE--EEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      .+++||.|.|+|++++++||+++|||++.....     ....|+..++..  +.+..  .         ..++..|++|.
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~l~~~~~~~~~~l~~--~---------~~~~~~hiaf~   66 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG-----DQMAFLRCNSDHHSIAIAR--G---------PHPSLNHVAFE   66 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC-----CeEEEEECCCCcceEEEcc--C---------CCCceEEEEEE
Confidence            379999999999999999999999999875432     134677776433  33321  1         11356899999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~dv~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+|++++.   ++|+++|+++...+     .+.+.+||+|||||.|||++..
T Consensus        67 v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          67 MPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            99877774   89999999986432     2346789999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.72  E-value=4e-16  Score=113.85  Aligned_cols=108  Identities=19%  Similarity=0.311  Sum_probs=80.9

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeEEEEEECC
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  158 (200)
                      +||.|.|+|++++++||+++||+++......+ ......|+..++.  .+.+.....          ..+..|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLALFPGPE----------RPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEEEcCCC----------CCCeeEEEEEcCC
Confidence            59999999999999999999999997654432 2235577777654  333332111          2457899999997


Q ss_pred             H---HHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEeC
Q 029050          159 V---SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       159 v---~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +   ++++++++++|+++...+     .+.+.++|+|||||+|||.+..
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence            6   478999999999986532     2357899999999999999753

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=3e-16  Score=112.26  Aligned_cols=114  Identities=26%  Similarity=0.509  Sum_probs=83.3

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC-eEEEEEecCCCCCCC--CCCCCCCceeEEEEEE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLS--GRPEHGGRDRHTCIAI  156 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~l~~~~~~~~~~--~~~~~~~~~~hi~f~v  156 (200)
                      +.+|.|.|.|++++++||+++|||++.....  .   ..+++..++ ..+.++.........  ..+....+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~--~---~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKED--R---RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCC--C---ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            4689999999999999999999999986421  1   236677776 445555433221100  0111234567999999


Q ss_pred             C--CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEEe
Q 029050          157 R--DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       157 ~--dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +  |++++++++.++|+++...   ..+++.+||+|||||+||++++
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            5  8999999999999988654   3467899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.72  E-value=2.4e-16  Score=113.06  Aligned_cols=107  Identities=23%  Similarity=0.311  Sum_probs=79.1

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC--CeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      +++++|+.|.|+|++++++||+++|||++....+      ..+|+...  .....+......         ..+..|++|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~hi~~   66 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKAP---------VAGLGHIAF   66 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeCC---------CCceeEEEE
Confidence            6789999999999999999999999999875432      23455432  122222221111         134689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec----C-CCceEEEEECCCCCeEEEEEe
Q 029050          155 AIR---DVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~---dv~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .+.   |+++++++++++|+++...    . .+++.+|+.|||||.||++..
T Consensus        67 ~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          67 RVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            994   7899999999999998643    1 235789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>PRK06724 hypothetical protein; Provisional

Probab=99.71  E-value=3.2e-16  Score=114.39  Aligned_cols=107  Identities=22%  Similarity=0.292  Sum_probs=75.0

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhcc---CCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      ++.+++||.|.|+|+++|++||+++|   |++....         ..| ..++..+.|.......     . ...+..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~---------~~~-~~g~~~l~l~~~~~~~-----~-~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE---------VAY-STGESEIYFKEVDEEI-----V-RTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee---------Eee-eCCCeeEEEecCCccc-----c-CCCCceeE
Confidence            35579999999999999999999966   5554321         011 1233334443322110     1 12346899


Q ss_pred             EEEE---CCHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEe
Q 029050          153 CIAI---RDVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       153 ~f~v---~dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ||.|   +|+++++++++++|+++...+       +|.+.+||+|||||.||++..
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            9998   589999999999999985432       334789999999999999864

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=4.2e-16  Score=111.99  Aligned_cols=111  Identities=22%  Similarity=0.293  Sum_probs=74.8

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCC--C-CCCCCCCceeEEEE--EE
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL--S-GRPEHGGRDRHTCI--AI  156 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~--~-~~~~~~~~~~hi~f--~v  156 (200)
                      ||.|.|+|++++++||+++|||++.....      ....+..++..+.+.........  . .......+..|++|  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            89999999999999999999999865322      11223344444444332221110  0 01111223457765  55


Q ss_pred             CCHHHHHHHHHHCCCeEEecC--------CCceEEEEECCCCCeEEEEEe
Q 029050          157 RDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +|+++++++|+++|+++..++        .+.+.+||+|||||.|||..+
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            699999999999999986432        235889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=4.1e-16  Score=112.52  Aligned_cols=113  Identities=17%  Similarity=0.143  Sum_probs=78.3

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCCCC---CCCCCCceeEEEEE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSG---RPEHGGRDRHTCIA  155 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~~~---~~~~~~~~~hi~f~  155 (200)
                      +.+|.|.|+|+++|++||+. |||+.......+.    ..++..+ +..+.|...+.......   ......+..|++|.
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~   75 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLS   75 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEe
Confidence            46799999999999999987 8999875333221    2444454 45666655322110000   00123344699999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEE
Q 029050          156 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       156 v~---dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |+   |+++++++++++|+++..++   .+.+.+||+|||||+|||+.
T Consensus        76 v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          76 ADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            98   68899999999999986543   34568999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.70  E-value=5.2e-16  Score=111.44  Aligned_cols=104  Identities=25%  Similarity=0.372  Sum_probs=79.5

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHH
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  161 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~  161 (200)
                      ...|.|+|++++++||++ |||+.....+.     ...++..++..++|...+...+     .  ....|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~~-----~--~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDLDP-----A--TSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcCCC-----C--CCcceEEEEeCCHHH
Confidence            367899999999999999 99999865442     2344666777888876542211     1  112579999999999


Q ss_pred             HHHHHHHCCCeEE-------ec----CCCceEEEEECCCCCeEEEEEe
Q 029050          162 LKMILDKAGISYT-------LS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       162 ~~~~l~~~G~~~~-------~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++++|+++|+++.       ..    .+|.+.++|+|||||+|||.|+
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            9999999999742       11    2577899999999999999985

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.70  E-value=1e-15  Score=107.74  Aligned_cols=105  Identities=30%  Similarity=0.470  Sum_probs=80.1

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHHHH
Q 029050           84 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  163 (200)
Q Consensus        84 ~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~~~  163 (200)
                      .|.|+|++++++||+++|||+.....+.    ...+++..++..+++.........     ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPE----PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCC----CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHHH
Confidence            5899999999999999999999876531    123556667777777665433211     1233468999999999999


Q ss_pred             HHHHHCCCe-EEec----CCCceEEEEECCCCCeEEEEE
Q 029050          164 MILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       164 ~~l~~~G~~-~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++++++|++ +..+    ..+.+.++++|||||.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999999998 4332    245588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.5e-15  Score=108.81  Aligned_cols=107  Identities=22%  Similarity=0.375  Sum_probs=76.9

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECC--
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  158 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d--  158 (200)
                      .|+.|.|+|++++.+||+++||++.....+  .   ...|. .++..+.+.........     . ++..|++|.+.+  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~-----~-~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAKFL-LEDPRLNFVLNERPGAP-----G-GGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeEEE-ecCCceEEEEecCCCCC-----C-CCeeEEEEEeCCHH
Confidence            589999999999999999999999865432  1   22333 33333333332221110     0 356899999986  


Q ss_pred             -HHHHHHHHHHCCCeEEecCC------CceEEEEECCCCCeEEEEEeC
Q 029050          159 -VSKLKMILDKAGISYTLSKS------GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       159 -v~~~~~~l~~~G~~~~~~~~------g~~~~~~~DPdGn~iEl~e~~  199 (200)
                       ++++++++.++|+++...+.      +.+.+|++|||||.|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999865431      246799999999999999764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.69  E-value=8.2e-16  Score=110.39  Aligned_cols=112  Identities=21%  Similarity=0.303  Sum_probs=77.1

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCC-CCCCCCCCceeEEEEEEC
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPL-SGRPEHGGRDRHTCIAIR  157 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~-~~~~~~~~~~~hi~f~v~  157 (200)
                      |+||.|.|+|+++|++||+. |||++......    ...+++..+ +..+.+......... ...+....+..|++|.+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            57999999999999999975 99998654321    122445555 455555433211100 011112234568999875


Q ss_pred             ---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 029050          158 ---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       158 ---dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~  196 (200)
                         |+++++++++++|+++...    ++|.+.++|+|||||.|||+
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence               8999999999999987543    34668899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=5.4e-16  Score=110.54  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=76.9

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHHH
Q 029050           83 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  162 (200)
Q Consensus        83 v~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~~  162 (200)
                      ..|.|+|++++++||++ |||++....+      ..+++..++..+.|........        ....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~--------~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVKDW--------AENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCccc--------ccCCEEEEEECCHHHH
Confidence            46889999999999988 9999987542      3477888877776654222111        1125799999999999


Q ss_pred             HHHHHHCCCeEE---------ecCCCceEEEEECCCCCeEEEEE
Q 029050          163 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       163 ~~~l~~~G~~~~---------~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +++|+++|+++.         ...+|.+.++|+|||||+|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998642         12467899999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.69  E-value=1.1e-15  Score=107.19  Aligned_cols=100  Identities=27%  Similarity=0.509  Sum_probs=73.1

Q ss_pred             EEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe----EEEEEecCCCCCCCCCCCCCCceeEEEEEECCHH
Q 029050           85 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  160 (200)
Q Consensus        85 l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~  160 (200)
                      |.|+|++++++||+++|||++....+      ..+.+..+..    ...+...+...      ....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDPP------GPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESSS------SSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCccc------cCCCceeEEEEEEcCHH
Confidence            68999999999999999999998444      2244555422    23344332211      12245689999999999


Q ss_pred             HHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 029050          161 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       161 ~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~  196 (200)
                      +++++++++|+++...    .+|.+.++|.|||||+|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999997543    35679999999999999996

...

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.68  E-value=1.3e-15  Score=105.58  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=86.2

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHH
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  161 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~  161 (200)
                      |+.|.|+|++++++||+++||++.......  .....+++..++..+++...++....    ....+..|++|.++|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            789999999999999999999999876542  11245667767778888876654321    234556899999999999


Q ss_pred             HHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEE
Q 029050          162 LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF  195 (200)
Q Consensus       162 ~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl  195 (200)
                      ++++++++|+.+....    .+.+.+++.||+||.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            9999999999886543    467899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.9e-15  Score=107.26  Aligned_cols=106  Identities=22%  Similarity=0.264  Sum_probs=77.5

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECC---
Q 029050           83 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---  158 (200)
Q Consensus        83 v~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d---  158 (200)
                      +.|.|+|++++++||+++||+++....+      ..+++.. ++..+.++.......   .+....+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP------TFALFVLGSGVKLGLWSRHTVEP---ASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC------ceEEEEeCCCcEEEEeeccccCC---CCCCCCCceEEEEEcCCHHH
Confidence            6789999999999999999999876432      1233444 455677766443221   11122345799999985   


Q ss_pred             HHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEE
Q 029050          159 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       159 v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +++++++++++|+++...+   ..++.++|+|||||+|||+.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            8899999999999986542   33468999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.68  E-value=1.8e-15  Score=107.34  Aligned_cols=103  Identities=22%  Similarity=0.328  Sum_probs=71.6

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCCCCCCCCCCCCCceeEEEE--E
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI--A  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f--~  155 (200)
                      +|+||.|.|.|++++.+||+ .|||++....+      . .++.. ++....+......         .....|++|  .
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~   64 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD------G-LELRTAGNDHRWARLLEGA---------RKRLAYLSFGIF   64 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------c-eEEEecCCCceEEEeecCC---------CCceeeEEEEeE
Confidence            68999999999999999997 69999975432      1 23333 3232222111111         112345444  4


Q ss_pred             ECCHHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEEe
Q 029050          156 IRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       156 v~dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++|+++++++++++|+++...+  .+.+.+||.|||||.|||...
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEecC
Confidence            5799999999999999986542  345689999999999999853

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.4e-15  Score=106.42  Aligned_cols=101  Identities=18%  Similarity=0.172  Sum_probs=74.6

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC---eEEEEEecCCCCCCCCCCCCCCceeEEEEEECCH
Q 029050           83 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  159 (200)
Q Consensus        83 v~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~---~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv  159 (200)
                      ..|.|+|++++++||+++|||+.....+      ...++..++   ..+.+.......         ....|++|.|+|+
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~v~d~   68 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDHG------WIATFASPQNMTVQVSLATEGGTA---------TVVPDLSIEVDDV   68 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcCC------ceEEEeecCCCCcEEEEecCCCCC---------CCCCEEEEEeCCH
Confidence            4688999999999999999999864321      233344332   234444322111         1236999999999


Q ss_pred             HHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEe
Q 029050          160 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       160 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++++++++++|+++..++    +|.+.+||.|||||.|||++.
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          69 DAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999999986542    456889999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.67  E-value=1.6e-15  Score=112.46  Aligned_cols=104  Identities=18%  Similarity=0.273  Sum_probs=77.7

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe-EEEEEecCCCCCCCCCCCCCCceeEEEEEECC-
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  158 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d-  158 (200)
                      +||.|.|+|++++++||+++|||++......     ..+|+...+. ..+.+...        +...++++|++|.|+| 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~--------~~~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVG--------PASSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeec--------cCCCCceEEEEEECCCH
Confidence            5899999999999999999999998765321     4577765432 22333211        1123578999999985 


Q ss_pred             --HHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          159 --VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       159 --v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                        +++++++|+++|+++...+     .+.+.+||+||||+.|||..
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence              4677999999999886432     34578999999999999975

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=2.2e-15  Score=108.28  Aligned_cols=107  Identities=23%  Similarity=0.319  Sum_probs=75.7

Q ss_pred             EeEEEEEcCCHHHHHHHHHhc---cCCEEeeecCCCCCCceEEEEEeC--CeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           80 VHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ++||.|.|+|++++++||+++   ||++.....+  .   ...++..+  +..+.+.......     +....+..|++|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~hi~f   70 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGPDFWVTKPFDGE-----PATAGNGTHVAF   70 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCceEEEeccccCC-----CCCCCCceEEEE
Confidence            579999999999999999998   6999875541  1   11233333  3456665432211     111223479999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEE
Q 029050          155 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       155 ~v~d---v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~  196 (200)
                      .|++   +++++++++++|+.+..++       .+.+.+||+|||||.|||+
T Consensus        71 ~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          71 AAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            9986   7889999999999876442       2345789999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.67  E-value=1.9e-15  Score=125.19  Aligned_cols=115  Identities=21%  Similarity=0.325  Sum_probs=81.9

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-eEEEEEeCCeE--EEEEecCCCCCCCCCCCCCCce
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~--~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      ..+.+.+++||.|.|+|++++++||+++|||++........... ...|+..++..  +.+...         + ..+..
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~g~~  208 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVGD---------P-EPGKL  208 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceecC---------C-CCCce
Confidence            44668899999999999999999999999999875432222211 34566554321  211110         1 11347


Q ss_pred             eEEEEEECC---HHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          150 RHTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       150 ~hi~f~v~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +|+||.|+|   +++++++|+++|+++..++     .+.+.+||+|||||+||+.+
T Consensus       209 ~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       209 HHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            899999986   5567889999999986543     13578999999999999983

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=6.4e-15  Score=105.09  Aligned_cols=110  Identities=19%  Similarity=0.247  Sum_probs=78.8

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCC--CCCCceeEEEEEE---C
Q 029050           83 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP--EHGGRDRHTCIAI---R  157 (200)
Q Consensus        83 v~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~--~~~~~~~hi~f~v---~  157 (200)
                      |.|.|+|++++.+||+++|||++..+..     ....++..++..++++..+........+  ..+.+..|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN-----DGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC-----CceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            7899999999999999999999876511     1345677777778777644221111111  1222334566665   5


Q ss_pred             CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEE
Q 029050          158 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       158 dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |++++++++++.|+++...+    +|++.++++|||||+|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            89999999999999986432    35789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.64  E-value=8e-15  Score=120.90  Aligned_cols=114  Identities=27%  Similarity=0.427  Sum_probs=81.3

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCcee
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      ..+.+++++||.|.|+|++++++||+++|||++..............|+..++.  .+.+..           ..+.+++
T Consensus       130 ~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  198 (294)
T TIGR02295       130 RGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALTN-----------GNGPRLH  198 (294)
T ss_pred             CCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEeec-----------CCCCcee
Confidence            345788999999999999999999999999998765432222233456654332  122211           1124679


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCe--EEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          151 HTCIAIRD---VSKLKMILDKAGIS--YTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       151 hi~f~v~d---v~~~~~~l~~~G~~--~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |+||.|+|   +++++++|+++|++  +...+     .+...+|++|||||+||+++
T Consensus       199 Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~  255 (294)
T TIGR02295       199 HIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYT  255 (294)
T ss_pred             eEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEe
Confidence            99999997   55678999999987  43322     12357999999999999986

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.64  E-value=6.3e-15  Score=121.28  Aligned_cols=107  Identities=21%  Similarity=0.281  Sum_probs=80.3

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      |.+++||.|.|+|+++|++||+++|||+.......     ...|+..++....+...+...         .++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGEN-----DALYLRLDSRAHRIAVHPGES---------DDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCCC-----ceEEEEcCCCceEEEEEECCc---------CCeeeEeeee
Confidence            46899999999999999999999999997653221     234667764333332222211         2357899999


Q ss_pred             CC---HHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEE
Q 029050          157 RD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       157 ~d---v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++   ++++.++|+++|+++...+       .+.+.++|.|||||.|||..
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEE
Confidence            97   8899999999999986532       34578999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.62  E-value=7.2e-15  Score=107.74  Aligned_cols=120  Identities=18%  Similarity=0.274  Sum_probs=82.3

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCC-C---CCCCCC-ceeEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS-G---RPEHGG-RDRHT  152 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~-~---~~~~~~-~~~hi  152 (200)
                      .++.|+.|.+++.-+...||...||++.....+.+..... +|+......++|...-+.+.+. .   .....+ +++||
T Consensus        41 tr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHI  119 (170)
T KOG2944|consen   41 TRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGHI  119 (170)
T ss_pred             hhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEecccCceeeecCCCCCCCcchhhcCCCCCCCccceE
Confidence            3455566666666666666666666665544444333322 7777777778887655443332 1   122223 77999


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecCCCc---eEEEEECCCCCeEEEEEe
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLSKSGR---PAIFTRDPDANALEFTQV  198 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~~~g~---~~~~~~DPdGn~iEl~e~  198 (200)
                      ||.|+|+++++++|+++|+++......+   ..+|+.|||||.|||.-.
T Consensus       120 ci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  120 CIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             EEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            9999999999999999999987765433   569999999999999753

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.62  E-value=2e-14  Score=118.31  Aligned_cols=112  Identities=15%  Similarity=0.245  Sum_probs=80.4

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC--CCC-CceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~--~~~-~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      +.+|+||.|.|+|++++.+||+++|||++......  +.. .+..+|+..++....+......        ...+++|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~--------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP--------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC--------CCCceEEEE
Confidence            57999999999999999999999999998754221  111 1245778776443222211111        124578999


Q ss_pred             EEECCHHH---HHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          154 IAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~dv~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |.|+|.++   ++++|+++|+ ....+     .+...+||+|||||+||+..
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            99997666   7999999999 43321     34678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.61  E-value=1.8e-14  Score=119.39  Aligned_cols=107  Identities=19%  Similarity=0.261  Sum_probs=79.4

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CC-eEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      |++++||.|.|+|++++++||+++|||++..+.+.      .+++.. ++ ....+.....         ...++.|++|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~---------~~~g~~hiaf   66 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA---------DTAGLDHMAF   66 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC---------CCCceeEEEE
Confidence            67899999999999999999999999999765431      234443 21 1111211111         1135789999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          155 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|+   |+++++++|+++|+++...+     ..++.+||+|||||.|||.+.
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~  118 (303)
T TIGR03211        67 KVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAE  118 (303)
T ss_pred             EeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEc
Confidence            998   78999999999999986532     245789999999999999974

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.61  E-value=1.7e-14  Score=118.86  Aligned_cols=108  Identities=21%  Similarity=0.283  Sum_probs=80.6

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      +|.+++||.|.|+|++++++||+++|||++..+.+      ..+|+....  ....+......         ..+..|++
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~~---------~~~~~hia   65 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP---------SAALSYIG   65 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeCC---------CcCccEEE
Confidence            36789999999999999999999999999976543      234554321  11222211111         12468999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEEe
Q 029050          154 IAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       154 f~v~---dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |.|+   |+++++++|+++|+++....  .+.+.+||+|||||.|||++.
T Consensus        66 f~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        66 FRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             EEeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            9997   78999999999999986543  346899999999999999863

The enzyme from Bacillus brevis contains manganese.

>PLN02300 lactoylglutathione lyase

Probab=99.56  E-value=1e-13  Score=114.27  Aligned_cols=119  Identities=20%  Similarity=0.234  Sum_probs=87.3

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC----eEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      ...+.|+.|.|+|++++.+||+++|||++......+...+...++..++    ..+++....+.    ..+..+.+..|+
T Consensus       152 ~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~i  227 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQI  227 (286)
T ss_pred             CCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeEE
Confidence            4478899999999999999999999999986544333445556665432    13444321111    112234567899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecC---CC--ceEEEEECCCCCeEEEEEeC
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLSK---SG--RPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~~---~g--~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|.|+|+++++++++++|+++...+   ++  .+.++|+|||||.++|++..
T Consensus       228 ~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        228 AIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            9999999999999999999987642   22  37899999999999999854

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.55  E-value=4.7e-14  Score=99.88  Aligned_cols=94  Identities=26%  Similarity=0.393  Sum_probs=77.3

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCceeEEEEEECC
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  158 (200)
                      +||+|.|+|++++++||+++||++.......+....+.+|+..++  ..++|++..+....  ....+.+++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~--~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSP--LDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCH--HHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcc--cccCCCCEEEEEEEeCC
Confidence            699999999999999999999999877666556667888999987  58999986665411  12367789999999999


Q ss_pred             HHHHHHHHHHCCCeEEec
Q 029050          159 VSKLKMILDKAGISYTLS  176 (200)
Q Consensus       159 v~~~~~~l~~~G~~~~~~  176 (200)
                      ++++.++|+++|+++...
T Consensus        79 ~d~~~~~l~~~G~~~~~~   96 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDE   96 (109)
T ss_dssp             HHHHHHHHHHTTECEEEC
T ss_pred             HHHHHHHHHHCCCEEccc
Confidence            999999999999998553

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.44  E-value=3.5e-12  Score=101.70  Aligned_cols=112  Identities=24%  Similarity=0.365  Sum_probs=88.8

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe-EEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      +.++.|.|.|+|++++..||+++||+++..+..      ..+-+..|+. -+.|.+.++...+.   ....++.|++|.+
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~~~---~~~aGLyH~AfLl   79 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARRPP---PRAAGLYHTAFLL   79 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCCCC---ccccceeeeeeec
Confidence            468999999999999999999999999998765      3355777877 56666666554321   2445789999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEEe
Q 029050          157 R---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +   |+..+..++.+.|+.+...  .....++||.||+||-||+...
T Consensus        80 P~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          80 PTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             CCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEec
Confidence            8   6778888999999998632  2346789999999999999864

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.42  E-value=6.7e-12  Score=90.48  Aligned_cols=113  Identities=19%  Similarity=0.215  Sum_probs=80.6

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC-e-EEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-E-MIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~-~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      ..+.|..|+++|++++++||+++|||+.........  .....+..++ . .-.+...+...     +.  +....+.|.
T Consensus         8 ~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~~~~~~-----p~--~~~~~iy~~   78 (127)
T COG3324           8 GTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMARPGSP-----PG--GGGWVIYFA   78 (127)
T ss_pred             CccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceeccCCcCC-----CC--CCCEEEEEe
Confidence            458899999999999999999999999986543322  2333333332 1 11121111111     11  223578889


Q ss_pred             ECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+|+++..++++++|.++...+    .+++.+.+.||+||+|.|+++.
T Consensus        79 v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          79 VDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             cCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            9999999999999999987653    4789999999999999999865

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.33  E-value=2.1e-11  Score=86.29  Aligned_cols=118  Identities=19%  Similarity=0.196  Sum_probs=83.4

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCC---CCCCCCCceeEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS---GRPEHGGRDRHTCIA  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~---~~~~~~~~~~hi~f~  155 (200)
                      ++-.|+|.|+|++++.+||+. ||++.......+.   ..+.+..+...+.|........-.   -.......-.-+|+.
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls   78 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLS   78 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEec
Confidence            466799999999999999998 9999987665433   234455566677776644332111   011122233468888


Q ss_pred             EC---CHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeCC
Q 029050          156 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       156 v~---dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      +.   +++++.++..++|++...++   ...++..|.|||||.||+...+|
T Consensus        79 ~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          79 AGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             cCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeCH
Confidence            76   78999999999999884443   34578899999999999998764

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.30  E-value=2.3e-11  Score=94.61  Aligned_cols=98  Identities=18%  Similarity=0.166  Sum_probs=70.9

Q ss_pred             ceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCC--CCceEEEEEeC--CeEEEEEecCCCCCCCC-----CCCCC
Q 029050           78 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVG--AEMIHLMELPNPDPLSG-----RPEHG  146 (200)
Q Consensus        78 ~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g--~~~~~l~~~~~~~~~~~-----~~~~~  146 (200)
                      .+++||++.|+  |++++++||+++|||+.........  .+.....+..+  +..+.|.+.........     ....+
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G   81 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGG   81 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCC
Confidence            57999999999  9999999999999999987654332  22333445553  34666765443211100     01235


Q ss_pred             CceeEEEEEECCHHHHHHHHHHCCCeEEe
Q 029050          147 GRDRHTCIAIRDVSKLKMILDKAGISYTL  175 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~~G~~~~~  175 (200)
                      .+++||||.|+|+++++++|+++|+++..
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~  110 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRARGVEFLP  110 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHHcCCeecc
Confidence            78899999999999999999999999843

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.29  E-value=1.1e-11  Score=96.87  Aligned_cols=120  Identities=18%  Similarity=0.199  Sum_probs=90.6

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----------CCceEEEEEeCCeEEEEEecCCCCCCCCC
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVGAEMIHLMELPNPDPLSGR  142 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~l~~~~~~~~~~~~  142 (200)
                      ..+-.++-|+++.|.|.+++++||+++|||++....+.++           ....-.++..|...-||+.--...-....
T Consensus        12 ~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~   91 (299)
T KOG2943|consen   12 KADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSK   91 (299)
T ss_pred             hccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccc
Confidence            3445679999999999999999999999999998776655           23333557777665555433333333456


Q ss_pred             CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          143 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       143 ~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      .+-|+++.||.+.++|+-...+.++..|.+    ..|.-.+++.||||+.|++.+
T Consensus        92 YelGndfg~i~I~s~dv~~~ve~v~~p~~~----~~g~~~~~v~dPdGykF~l~~  142 (299)
T KOG2943|consen   92 YELGNDFGGITIASDDVFSKVEKVNAPGGK----GSGCGIAFVKDPDGYKFYLID  142 (299)
T ss_pred             eeccCCcccEEEeHHHHHHHHHHhcCcCCc----ccceEEEEEECCCCcEEEEec
Confidence            778888999999999999888888877652    234557899999999999985

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.27  E-value=1.1e-10  Score=81.32  Aligned_cols=110  Identities=27%  Similarity=0.485  Sum_probs=74.1

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC--CeEEEEEecCCCCCC-CCC-CCCCCceeEEEE-
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPL-SGR-PEHGGRDRHTCI-  154 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~~~l~~~~~~~~~-~~~-~~~~~~~~hi~f-  154 (200)
                      +=|+.|.|+|++++++||.++||.+.....+        .|+..+  +.++.....+..+.. .++ ..++--..|++. 
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvV   76 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVV   76 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEE
Confidence            4589999999999999999999999876443        343332  334333333332211 111 112222346655 


Q ss_pred             -EECCHHHHHHHHHHCCCeEEecC--------CCceEEEEECCCCCeEEEEE
Q 029050          155 -AIRDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       155 -~v~dv~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdGn~iEl~e  197 (200)
                       .++|--++.++|+++|+.+...+        ...+.+|+.||.||.+|+-.
T Consensus        77 l~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          77 LPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             EEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence             45588899999999999874432        34688999999999999865

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.23  E-value=6.6e-10  Score=80.76  Aligned_cols=108  Identities=18%  Similarity=0.135  Sum_probs=76.4

Q ss_pred             EEEEc-CCHHHHHHHHHhccCCEEeeecCCC----------CCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeE
Q 029050           83 VGILC-ENLERSLEFYQNILGLEINEARPHD----------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        83 v~l~v-~Dl~~s~~FY~~vLG~~~~~~~~~~----------~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      ..|.+ .|.+++++||+++||+++......+          ......+.+.+++..+.+.........     ..+...+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~-----~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF-----TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC-----CCCCCEE
Confidence            35667 9999999999999999998755321          122234567888888877764432211     1123357


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 029050          152 TCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       152 i~f~v~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~  196 (200)
                      +++.|+|   +++++++|.+.| ++...    .+|.+..+++||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            8999885   778889987776 55432    36778999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.15  E-value=1.2e-10  Score=82.76  Aligned_cols=120  Identities=22%  Similarity=0.284  Sum_probs=72.7

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc---eEEEEEeCCeEEEEEecC--------CCCCCCCCCCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY---RGAWLWVGAEMIHLMELP--------NPDPLSGRPEHG  146 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~---~~~~l~~g~~~~~l~~~~--------~~~~~~~~~~~~  146 (200)
                      ++++||.|.|+|++++++||+++||++............   ...+..............        ............
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            368999999999999999999999999998665433221   111111111000110000        000000001111


Q ss_pred             --CceeEEEEEECC---HHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEE
Q 029050          147 --GRDRHTCIAIRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       147 --~~~~hi~f~v~d---v~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e  197 (200)
                        .+..|+++.+.+   ..+........|..+....  .....+||+||||+.||+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence              235799999997   6666777777788764432  22238999999999999974

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.10  E-value=4.9e-10  Score=95.03  Aligned_cols=104  Identities=17%  Similarity=0.191  Sum_probs=73.7

Q ss_pred             CCCceeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCC--CCceEEEEEe--CCeEEEEEecCCCCCCCC----
Q 029050           72 KIDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWV--GAEMIHLMELPNPDPLSG----  141 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~--g~~~~~l~~~~~~~~~~~----  141 (200)
                      .+.+.+.+++||++.|+  |+++++.||+++|||+.........  ......++..  |+..++|.+.........    
T Consensus       151 ~~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~f  230 (353)
T TIGR01263       151 PPGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEF  230 (353)
T ss_pred             CCCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHH
Confidence            35677999999999999  9999999999999999986544221  1111122332  345777776422211111    


Q ss_pred             -CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEe
Q 029050          142 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  175 (200)
Q Consensus       142 -~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~  175 (200)
                       ....+.+++||||.|+|+++++++|+++|+++..
T Consensus       231 l~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~  265 (353)
T TIGR01263       231 LEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLD  265 (353)
T ss_pred             HHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCc
Confidence             1123678899999999999999999999998854

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.08  E-value=1.1e-08  Score=74.92  Aligned_cols=113  Identities=19%  Similarity=0.164  Sum_probs=83.6

Q ss_pred             EEEcC-CHHHHHHHHHhccCCEEeeecCCCC----------CCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           84 GILCE-NLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        84 ~l~v~-Dl~~s~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      .|..+ |.+++++||+++||.+.....+..+          ...-.+-|.+++..+.+........   ....++...-|
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~---~~~~~~~s~~l   81 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG---ATEGGGTSLSL   81 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC---cccCCCeeEEE
Confidence            46677 9999999999999999987665544          3344466888888777765333222   11112222467


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .+.++|++++++++.+.|+++...    .+|.+...++||.|+.|-|....
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCc
Confidence            778889999999999999888654    36889999999999999998653

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.06  E-value=4.2e-09  Score=89.38  Aligned_cols=96  Identities=13%  Similarity=0.124  Sum_probs=71.8

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCC--CCCCCCceeEEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  156 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~f~v  156 (200)
                      +++||.|+|+|++++++||.+.|||+........... ....+..|+..+.|...........  ...++.+..|++|.|
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V   80 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRV   80 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEE
Confidence            6899999999999999999999999998762211111 2333566777888876544321111  123667889999999


Q ss_pred             CCHHHHHHHHHHCCCeEEe
Q 029050          157 RDVSKLKMILDKAGISYTL  175 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~  175 (200)
                      +|+++++++++++|+++..
T Consensus        81 ~Dv~~a~~~l~~~Ga~~v~   99 (353)
T TIGR01263        81 DDAAAAFEAAVERGAEPVQ   99 (353)
T ss_pred             CCHHHHHHHHHHCCCEecc
Confidence            9999999999999998844

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.89  E-value=1.3e-08  Score=84.57  Aligned_cols=104  Identities=16%  Similarity=0.165  Sum_probs=71.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  157 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  157 (200)
                      .++-||+|.|+|+++|++||+.+|++.. +..+  .    ..-+  ++..+.+..... +    ...  ..-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde--~----a~cm--~dtI~vMllt~~-D----~~~--~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD--K----LFLL--GKTSLYLQQTKA-E----KKN--RGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC--c----cccc--cCcEEEEEecCC-C----CCC--cceEEEEeccC
Confidence            3577999999999999999999988875 3222  1    1112  444444443332 1    111  12245888887


Q ss_pred             ---CHHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEEe
Q 029050          158 ---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       158 ---dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e~  198 (200)
                         +++++.++..++|++.....  .|. .--|.|||||.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf-~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP-LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC-cceeECCCCCEEEEEEE
Confidence               78999999999999663332  345 78899999999999863

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.86  E-value=1.3e-08  Score=87.03  Aligned_cols=102  Identities=14%  Similarity=0.121  Sum_probs=75.3

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----CCceEEEEEeCC--eEEEEEecCCC---CCCCC--
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVGA--EMIHLMELPNP---DPLSG--  141 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~--~~~~l~~~~~~---~~~~~--  141 (200)
                      +..+.+++||++.|++++.++.||+++|||+..+......     .+.+...+..++  ..+.|.+....   .....  
T Consensus       175 ~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eF  254 (398)
T PLN02875        175 DYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTY  254 (398)
T ss_pred             CCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHH
Confidence            3457899999999999999999999999999886544322     123455566654  56777775421   11111  


Q ss_pred             -CCCCCCceeEEEEEECCHHHHHHHHHHC----CCeEEe
Q 029050          142 -RPEHGGRDRHTCIAIRDVSKLKMILDKA----GISYTL  175 (200)
Q Consensus       142 -~~~~~~~~~hi~f~v~dv~~~~~~l~~~----G~~~~~  175 (200)
                       ....|.|++||||.++|+.++.++|+++    |+++..
T Consensus       255 L~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        255 LEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             HHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCC
Confidence             1234578999999999999999999999    998854

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.77  E-value=3.6e-08  Score=77.44  Aligned_cols=111  Identities=23%  Similarity=0.321  Sum_probs=74.4

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC-
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  157 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-  157 (200)
                      .+-.|.|.|.|++++++||+++|||++.....    .+..+.|..++.+..|-.....+.-  ....  +...++|.++ 
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekee----k~t~~~mgYgd~q~~LElt~~~~~i--d~~k--g~griafaip~  220 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEE----KYTRARMGYGDEQCVLELTYNYDVI--DRAK--GFGRIAFAIPT  220 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhh----hhhhhhhccCCcceEEEEEeccCcc--cccc--cceeEEEeccc
Confidence            37789999999999999999999999997532    2334557777665444332222211  1122  2345666665 


Q ss_pred             -CHHHHHHHHHHCCCeE----Ee-cCC---CceEEEEECCCCCeEEEEE
Q 029050          158 -DVSKLKMILDKAGISY----TL-SKS---GRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       158 -dv~~~~~~l~~~G~~~----~~-~~~---g~~~~~~~DPdGn~iEl~e  197 (200)
                       ++..+.+.++..+.++    +. ..+   +...+.+.||||+.|.|+.
T Consensus       221 d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVd  269 (299)
T KOG2943|consen  221 DDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVD  269 (299)
T ss_pred             cccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEec
Confidence             7888888888775554    22 222   3467889999999999985

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.72  E-value=1.1e-07  Score=76.22  Aligned_cols=97  Identities=23%  Similarity=0.294  Sum_probs=67.6

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEe--cCCCCCCCCCCCCCCceeEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME--LPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~--~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      -+.|+||.|.|.|++++.+||+++|||+...+.+      ...|+..|+.+.|+..  ...... ........++..+.+
T Consensus       166 ~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~-~~~~~~~~GLa~~~i  238 (265)
T COG2514         166 GTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGA-RPRNANASGLAWLEI  238 (265)
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCC-CCCCCCCCCcceEEE
Confidence            4679999999999999999999999999998733      4478999998766653  233222 122234456677888


Q ss_pred             EECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEE
Q 029050          155 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       155 ~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~  196 (200)
                      .+++-..+.......                .||+|+.|+++
T Consensus       239 ~~~~~~~l~~~~~~~----------------~Dp~G~~i~~~  264 (265)
T COG2514         239 HTPDPEKLDATGTRL----------------TDPWGIVIRVV  264 (265)
T ss_pred             EcCCcccccccccce----------------ecCCCceEEEe
Confidence            877643332211111                89999999875

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.62  E-value=1e-07  Score=72.99  Aligned_cols=93  Identities=19%  Similarity=0.316  Sum_probs=59.5

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCC--CC------CCCCCceeE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GR------PEHGGRDRH  151 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~--~~------~~~~~~~~h  151 (200)
                      |+|+.+.|+|++++.++|++.|||.+.........+.....+..++..++|+...+.....  +.      ...+.+..+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999998889999998776666667777777788899999865432221  11      124677889


Q ss_pred             EEEEECCHHHHHHHHHHCCCe
Q 029050          152 TCIAIRDVSKLKMILDKAGIS  172 (200)
Q Consensus       152 i~f~v~dv~~~~~~l~~~G~~  172 (200)
                      +|+.++|+++..++++++|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999985

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.40  E-value=3.7e-05  Score=54.48  Aligned_cols=110  Identities=18%  Similarity=0.192  Sum_probs=64.2

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC--CeEEEEEecCCCCCCCCCCCCCCceeEEEEEECC
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  158 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~d  158 (200)
                      .+-.|+|.|-+..++||++.|||++..+..      ..++|...  ...+.+-+.|.......  +..-.+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V--~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAV--EGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B----SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccc--cCcceeeEEEEEcCC
Confidence            456899999999999999999999998765      33555443  23666666666542111  111135789999987


Q ss_pred             HHHHHHHHHHCCCeEE--ecCCCceEEEEECCCCCeEEEEEeC
Q 029050          159 VSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       159 v~~~~~~l~~~G~~~~--~~~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      -+++-+ |.++|.++.  .....++++-..+|+|+.|.+...+
T Consensus        74 ~~EIe~-LLar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   74 PKEIEA-LLARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHHHH-HHHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHHHH-HHhcccccceeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            766644 444555442  2334577888999999999998543

>PRK10148 hypothetical protein; Provisional

Probab=98.35  E-value=6.1e-05  Score=56.15  Aligned_cols=109  Identities=14%  Similarity=0.030  Sum_probs=71.9

Q ss_pred             EEEEc-CCHHHHHHHHHhccCCEEeeecC-----C---------------CCCCceEEEEEeCCeEEEEEecCCCCCCCC
Q 029050           83 VGILC-ENLERSLEFYQNILGLEINEARP-----H---------------DKLPYRGAWLWVGAEMIHLMELPNPDPLSG  141 (200)
Q Consensus        83 v~l~v-~Dl~~s~~FY~~vLG~~~~~~~~-----~---------------~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~  141 (200)
                      ..|.. .|.+++++||+++||.++.....     .               .....-.+.|.+++..+.+.......    
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~----   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG----   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc----
Confidence            34555 48999999999999999864321     0               11223346678888766665422111    


Q ss_pred             CCCCCCceeEEEEEECCHHH---HHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          142 RPEHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       142 ~~~~~~~~~hi~f~v~dv~~---~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                       +..+. ..++++.++|.++   +++.| +.|.++...    .++.+...++||.|+.|.|...
T Consensus        81 -~~~~~-~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 -KAHYS-GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             -CCCCC-eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence             11112 3578888888776   56666 577777543    3567889999999999999764

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.32  E-value=4.6e-06  Score=61.37  Aligned_cols=120  Identities=11%  Similarity=0.034  Sum_probs=77.3

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      +++.+.++.+|.+.++|.+++..|++ .|||+.+......    ....++-|+..+.|...++.........+|.+..-+
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            46789999999999999877777775 5999999754321    233456688777776633321111123467788899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEE
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +|.|+|.++++++..++|.+....+   .....--++-++|.++-|++
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVd  125 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVD  125 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEe
Confidence            9999999999999999999774432   12233455666666666665

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.28  E-value=2.9e-06  Score=69.38  Aligned_cols=102  Identities=16%  Similarity=0.149  Sum_probs=70.8

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc--eEEEEEeCCeEEEEEecCCCCCC-C--CCCCCCCce
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY--RGAWLWVGAEMIHLMELPNPDPL-S--GRPEHGGRD  149 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~--~~~~l~~g~~~~~l~~~~~~~~~-~--~~~~~~~~~  149 (200)
                      ..+.+++||.+.|.|.+.+..||+..|||++....+.+....  .-.-++.|...+.+...-++... -  ....++.+.
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccch
Confidence            347799999999999999999999999999986443211100  00113334444444443333221 1  235577778


Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEec
Q 029050          150 RHTCIAIRDVSKLKMILDKAGISYTLS  176 (200)
Q Consensus       150 ~hi~f~v~dv~~~~~~l~~~G~~~~~~  176 (200)
                      .-+||+|+|.+++.+.+.++|+++...
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~  119 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRP  119 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCC
Confidence            899999999999999999999998654

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.25  E-value=3e-05  Score=66.59  Aligned_cols=118  Identities=15%  Similarity=0.160  Sum_probs=79.2

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC--CCceEEEEEeCCeEEEEEecCCCC--C----------CC---C-
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPD--P----------LS---G-  141 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~l~~~~~~~--~----------~~---~-  141 (200)
                      ++||.++|.|.+.+..||+..|||+.+.......  .......++.|+..+.|.....+.  .          ..   . 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            5899999999999999999999999987554211  112234456677676666552221  0          00   0 


Q ss_pred             -----CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecCC-------C--ceEEEEECCCCCeEEEEE
Q 029050          142 -----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS-------G--RPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       142 -----~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~-------g--~~~~~~~DPdGn~iEl~e  197 (200)
                           ...++.++.-++|+|+|++++++++.++|.+....+.       +  ....-+.-++|..+-|++
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVd  150 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVS  150 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEc
Confidence                 1246778889999999999999999999998744321       1  122335556666666665

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.92  E-value=2e-05  Score=65.53  Aligned_cols=103  Identities=15%  Similarity=0.188  Sum_probs=70.7

Q ss_pred             CCceeceEeEEEEEc--CCHHHHHHHHHhccCCEEeeecCCCC--CCceEEEEEeC--CeEEEEEecCCCCCCCC---CC
Q 029050           73 IDYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVG--AEMIHLMELPNPDPLSG---RP  143 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v--~Dl~~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g--~~~~~l~~~~~~~~~~~---~~  143 (200)
                      ....+..++|+...|  ..++.+..||+++|||+.....+.+.  ...+..-|...  ...+-|-...+.....+   ..
T Consensus       161 ~~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~  240 (363)
T COG3185         161 GGVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLRE  240 (363)
T ss_pred             cccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHH
Confidence            344567899998886  89999999999999999986544322  22222223333  33444444333322111   12


Q ss_pred             CCCCceeEEEEEECCHHHHHHHHHHCCCeEEe
Q 029050          144 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  175 (200)
Q Consensus       144 ~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~  175 (200)
                      -+|.|++||+|.++|+-++.++++++|+++..
T Consensus       241 y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~  272 (363)
T COG3185         241 YRGEGIQHIAFGTDDIYATVAALRERGVKFLP  272 (363)
T ss_pred             hCCCcceEEEecccHHHHHHHHHHHcCCccCC
Confidence            36778999999999999999999999999843

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.22  E-value=0.014  Score=41.71  Aligned_cols=97  Identities=20%  Similarity=0.139  Sum_probs=60.3

Q ss_pred             cCCHHHHHHHHHhccCCEEee---ecCC----CCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCH
Q 029050           87 CENLERSLEFYQNILGLEINE---ARPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  159 (200)
Q Consensus        87 v~Dl~~s~~FY~~vLG~~~~~---~~~~----~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv  159 (200)
                      -.+.+++.+||.++||-..+.   ..+.    .....-.+.|.+++..+.+.......      ..+.+ ..+++.++|.
T Consensus        10 ~g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~~------~~~~~-~sl~i~~~~~   82 (116)
T PF06983_consen   10 NGNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPDF------PFGNN-ISLCIECDDE   82 (116)
T ss_dssp             SS-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS----------TT-EEEEEEESSH
T ss_pred             CCCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCCC------CCCCc-EEEEEEcCCH
Confidence            379999999999999953322   1111    11223345688888887776654111      11222 5788888865


Q ss_pred             ---HHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEE
Q 029050          160 ---SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       160 ---~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~  196 (200)
                         ++++++|.+.|-      +......+.|--|..|.|+
T Consensus        83 ee~~~~f~~Ls~gG~------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   83 EEIDRIFDKLSEGGQ------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHHTTTE------TCCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHHcCCC------ccceeEEEEeCCCCEEEeC
Confidence               455777777775      3337889999999999885

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.19  E-value=0.0003  Score=57.84  Aligned_cols=104  Identities=15%  Similarity=0.070  Sum_probs=70.1

Q ss_pred             CCCceeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCCCceE-----EEEEeCCeEEEEEecCCCCCCCC---
Q 029050           72 KIDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRG-----AWLWVGAEMIHLMELPNPDPLSG---  141 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~-----~~l~~g~~~~~l~~~~~~~~~~~---  141 (200)
                      -+.+.+..++|++..++  .++.+.+||.+.|||...+..+....+...     .-+...+..+.+...........   
T Consensus       171 l~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQ  250 (381)
T KOG0638|consen  171 LPKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQ  250 (381)
T ss_pred             CCccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHH
Confidence            34578899999999998  788999999999999998876643322111     01222233333222111111111   


Q ss_pred             -----CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEe
Q 029050          142 -----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  175 (200)
Q Consensus       142 -----~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~  175 (200)
                           ....|.|++||++.++|+-++.+.|+++|.++..
T Consensus       251 Iqeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs  289 (381)
T KOG0638|consen  251 IQEYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLS  289 (381)
T ss_pred             HHHHHHhcCCCceeeeeecchHHHHHHHHHHhcCCcccc
Confidence                 1235678999999999999999999999999853

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.02  E-value=0.0096  Score=49.87  Aligned_cols=111  Identities=13%  Similarity=0.050  Sum_probs=75.6

Q ss_pred             CCceeceEeEEEEEcCCH-HHHHHHHHhccCCEEeeecCCCCCCceEEEE-EeCCeEEEEEecCCCCCCCCCCCCCCcee
Q 029050           73 IDYGVVSVHHVGILCENL-ERSLEFYQNILGLEINEARPHDKLPYRGAWL-WVGAEMIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl-~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      .++...++.+|.+.|.|. ++...++.. |||....+-..     ..+.+ +-|+..+.+...+..........++....
T Consensus        16 ~P~~~~GfeFvEf~~~d~~~~l~~l~~~-lGF~~~~~Hrs-----k~v~l~rQGdinlvvn~~~~s~a~~f~~~Hgps~~   89 (363)
T COG3185          16 NPEGTDGFEFVEFAVPDPQEALGALLGQ-LGFTAVAKHRS-----KAVTLYRQGDINLVVNAEPDSFAAEFLDKHGPSAC   89 (363)
T ss_pred             CCCCCCceeEEEEecCCHHHHHHHHHHH-hCccccccccc-----cceeEEEeCCEEEEEcCCCcchhhHHHHhcCCchh
Confidence            455678999999999999 555556655 99998864432     22333 44665665554443311112245677778


Q ss_pred             EEEEEECCHHHHHHHHHHCCCeEEec-------------CCCceEEEEECCC
Q 029050          151 HTCIAIRDVSKLKMILDKAGISYTLS-------------KSGRPAIFTRDPD  189 (200)
Q Consensus       151 hi~f~v~dv~~~~~~l~~~G~~~~~~-------------~~g~~~~~~~DPd  189 (200)
                      -++|.|+|...++++.++.|.+....             .-|+..+||-|.+
T Consensus        90 a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~  141 (363)
T COG3185          90 AMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRY  141 (363)
T ss_pred             eeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccC
Confidence            89999999999999999999854221             1356778888887

>PF15067 FAM124: FAM124 family

Probab=97.00  E-value=0.0067  Score=48.03  Aligned_cols=98  Identities=20%  Similarity=0.281  Sum_probs=58.3

Q ss_pred             eEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC---Ce--EEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           81 HHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AE--MIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        81 ~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      --++|+|+  |.+.+++||+-+|+-+.....+      +..|+.+-   +.  ++.|-..+  ......+...   .-+.
T Consensus       130 lRftly~~~~N~~d~vr~Yelil~~~~~~~k~------~FC~F~lys~~~~~iQlsLK~lp--~~~~p~p~es---avLq  198 (236)
T PF15067_consen  130 LRFTLYCSFDNYEDMVRFYELILQREPTQQKE------DFCFFTLYSQPGLDIQLSLKQLP--PGMSPEPTES---AVLQ  198 (236)
T ss_pred             EEEEEEecCCCHHHHHHHHHHHhccCcceeeC------CcEEEEEecCCCeEEEEEeccCC--CCCCcccccc---eEEE
Confidence            34788898  9999999999999998866544      22444332   22  33333321  1111122222   3599


Q ss_pred             EEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEE
Q 029050          154 IAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE  194 (200)
Q Consensus       154 f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iE  194 (200)
                      |.|.|+.++...|=.-=..++..     .--..|||||.|=
T Consensus       199 F~V~~igqLvpLLPnpc~PIS~~-----rWqT~D~DGNkIL  234 (236)
T PF15067_consen  199 FRVEDIGQLVPLLPNPCSPISET-----RWQTEDYDGNKIL  234 (236)
T ss_pred             EEecchhhhcccCCCCcccccCC-----cceeeCCCCCEec
Confidence            99999999865432221122222     2457899999873

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.01  E-value=0.036  Score=38.62  Aligned_cols=50  Identities=18%  Similarity=0.122  Sum_probs=39.6

Q ss_pred             eEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCC-CeEEEEEeC
Q 029050          150 RHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDA-NALEFTQVD  199 (200)
Q Consensus       150 ~hi~f~v~dv~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdG-n~iEl~e~~  199 (200)
                      +|++|.|+|++++.+.+.+ .|++....    ..+.+..++..++| ..|||+++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 89865332    34456788889988 689999875

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.53  E-value=0.11  Score=35.92  Aligned_cols=90  Identities=20%  Similarity=0.283  Sum_probs=43.0

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC--
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  157 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~--  157 (200)
                      +..|.|.|+| +++..||+++||-..                   ...+.+.+..+++-........ .+..+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~-------------------~~~l~f~ea~G~DL~~~~~~tw-DLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQL-------------------PFFLTFQEAQGPDLTIENNETW-DLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHH-------------------TTTEEEEE---CCGSS-TTSBS-SEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCC-------------------CceEEEeeccCCccccCCCcEE-eeEEEEEEecCc
Confidence            5678999999 889999999886221                   1224555544443332222233 3567888888  


Q ss_pred             -CHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeE
Q 029050          158 -DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  193 (200)
Q Consensus       158 -dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~i  193 (200)
                       |+.++.+++.+.+. +..  ...+.+-+.||.|..|
T Consensus        65 ~Dl~~L~~~le~~~~-fid--Kk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   65 FDLAALKSHLEEQEF-FID--KKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             --HHHHHHHTTTS-E-E----TT-SEEEEE-TTS-EE
T ss_pred             ccHHHHHHHhcccce-Eec--CCceEEEEECCcceEE
Confidence             77888999888443 222  2346788899987543

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=94.44  E-value=0.19  Score=37.61  Aligned_cols=53  Identities=15%  Similarity=0.163  Sum_probs=38.4

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEe
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLME  132 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~  132 (200)
                      ++++||+|.|+|+..+..-+++ +|.+.....+.... -..+|+.-. +.++++..
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk~-K~iaF~~dpDgywiei~~  167 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGKM-KPIAFLHDPDGYWIEIEL  167 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCccc-cceeEEECCCCCeEEEee
Confidence            6899999999999999999999 99996655543333 245665543 44666543

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.99  E-value=0.72  Score=33.15  Aligned_cols=54  Identities=15%  Similarity=0.226  Sum_probs=37.3

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEe
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLME  132 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~  132 (200)
                      .++.|+++.|.|++++.+-..+ .|.++.........+.+.+|+.-. +..++|++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4789999999999999999998 798887532222223344555543 44667665

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=90.92  E-value=1.9  Score=30.95  Aligned_cols=59  Identities=10%  Similarity=-0.042  Sum_probs=44.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPD  137 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~  137 (200)
                      .++.|+.+.|.|++++.+=.++ .|.++.........+.+.++++-. +..++|++.....
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~~  127 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGYK  127 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCCC
Confidence            4688999999999999988887 899998644433444556666654 5689999876653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=90.37  E-value=1.2  Score=29.45  Aligned_cols=39  Identities=18%  Similarity=0.244  Sum_probs=32.9

Q ss_pred             CHHHHHHHHHHCCCeEEe---cCCCceEEEEECCCCCeEEEE
Q 029050          158 DVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       158 dv~~~~~~l~~~G~~~~~---~~~g~~~~~~~DPdGn~iEl~  196 (200)
                      ..+++.+.+++.|+++..   +.+|.+.+...|.||+.+|+.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~   71 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVY   71 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEE
Confidence            688999999999997743   245678899999999999986

This is family M4 in the peptidase classification.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=90.16  E-value=1.7  Score=30.15  Aligned_cols=31  Identities=13%  Similarity=0.374  Sum_probs=26.6

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeec
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEAR  109 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~  109 (200)
                      .++.|+.+.|.|++++.+...+ .|.++....
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~~  101 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQEG  101 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeeccC
Confidence            5789999999999999999987 799887643

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=89.85  E-value=2.3  Score=31.71  Aligned_cols=52  Identities=13%  Similarity=0.153  Sum_probs=37.7

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEec-----CC------------C-----ceEEEEECCCCCeEEEEEeC
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLS-----KS------------G-----RPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~-----~~------------g-----~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++.|+++.|.|+++..+-.++ .|.++...     ..            +     ....++..++|..||+++..
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            468999999999999998876 68866311     00            1     23456666778889999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=89.72  E-value=1.9  Score=32.06  Aligned_cols=50  Identities=10%  Similarity=0.120  Sum_probs=34.7

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEEC--CCCCeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD--PDANALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~D--PdGn~iEl~e~  198 (200)
                      |+.|+++.|+|+++..+...+ .|.++.....+. ..++..  .+|..|++.+.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGDR-VRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCE-EEEEecCCCCCCEEEEEeC
Confidence            468999999999999998866 598876543332 222332  24788888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02367 lactoylglutathione lyase

Probab=89.61  E-value=1.7  Score=34.83  Aligned_cols=57  Identities=19%  Similarity=0.278  Sum_probs=41.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  136 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~  136 (200)
                      .+++||+|.|.|++++.+-.++ .|.++..... .......+|+.- ++..++|++....
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~-~g~~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPN-DGKMKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCc-cCCceEEEEEECCCCCEEEEEecccc
Confidence            4899999999999999999988 9999985332 211123456654 4568888875544

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.33  E-value=2  Score=29.97  Aligned_cols=50  Identities=14%  Similarity=0.164  Sum_probs=34.5

Q ss_pred             ceeEEEEEECCHHHHHHHHHHC----CCeEEecCCCceEEEEECCCCCeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~----G~~~~~~~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++.|+.+.|.|++++.+...+.    |.+......+ ...|+...++..+++++.
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~   54 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQA   54 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEec
Confidence            3579999999999998888775    8887654322 233443345677777754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11478 putative lyase; Provisional

Probab=88.17  E-value=3.8  Score=28.62  Aligned_cols=54  Identities=9%  Similarity=0.174  Sum_probs=34.4

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEe
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  132 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~  132 (200)
                      .++.|+++.|.|++++.+-..+ .|.++.........+...+|+.- ++..+++++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            4689999999999999998877 79987643211112223444443 234555543

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.82  E-value=3.9  Score=28.00  Aligned_cols=50  Identities=16%  Similarity=0.023  Sum_probs=35.2

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEecC--CC--ceEEEEECCCCCeEEEEE
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK--SG--RPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~--~g--~~~~~~~DPdGn~iEl~e  197 (200)
                      ++.|+++.|.|++++.+...+ .|..+....  .+  ...+.+..+++..+|+..
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            468999999999999999975 798875432  11  223444556677788764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=86.12  E-value=11  Score=29.21  Aligned_cols=77  Identities=19%  Similarity=0.125  Sum_probs=42.7

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeec-CCCCCCceEE----EEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGA----WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~~----~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      ..++||.++|++.+.+.+|-...+..-..-.. .....+....    =+..++..+.+++.+-+..  ..+ ...|.-||
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~--K~Y-p~eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKD--KRY-PQEGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---S--S---SS-EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCC--CCC-CCCCceEE
Confidence            36899999999999999999987755433221 1111111111    1445777888888776543  112 22467899


Q ss_pred             EEEEC
Q 029050          153 CIAIR  157 (200)
Q Consensus       153 ~f~v~  157 (200)
                      -|.++
T Consensus       110 E~Vip  114 (185)
T PF06185_consen  110 EFVIP  114 (185)
T ss_dssp             EEE--
T ss_pred             EEEec
Confidence            99997

; PDB: 1K4N_A.

>PRK10291 glyoxalase I; Provisional

Probab=86.02  E-value=6.6  Score=27.59  Aligned_cols=57  Identities=16%  Similarity=0.132  Sum_probs=38.5

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeec-CCCCCCceEEEEEe-CCeEEEEEecCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWV-GAEMIHLMELPN  135 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~-g~~~~~l~~~~~  135 (200)
                      .+++|+.+.|.|++++.+-..+ .|.++.... +........+|+.- ++..++|++...
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            4689999999999999888877 898876432 11122223455443 456888887553

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=85.50  E-value=3.9  Score=26.80  Aligned_cols=48  Identities=15%  Similarity=0.214  Sum_probs=36.1

Q ss_pred             EEEEEECCHHHHHHHHHH-CCCeEEecCC--CceEEEEECCCCCeEEEEEeC
Q 029050          151 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       151 hi~f~v~dv~~~~~~l~~-~G~~~~~~~~--g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+.+.+.|+++..+.+.+ .|.+......  .....++.++ +..|+|.+..
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~   51 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGD   51 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCC
Confidence            788999999999999987 8988766543  2455666655 7888887643

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=85.40  E-value=4.9  Score=27.48  Aligned_cols=50  Identities=24%  Similarity=0.286  Sum_probs=35.0

Q ss_pred             eeEEEEEECCHHHHHHHHHHC-CCeEEecC---C-CceEEEEECCC---CCeEEEEEe
Q 029050          149 DRHTCIAIRDVSKLKMILDKA-GISYTLSK---S-GRPAIFTRDPD---ANALEFTQV  198 (200)
Q Consensus       149 ~~hi~f~v~dv~~~~~~l~~~-G~~~~~~~---~-g~~~~~~~DPd---Gn~iEl~e~  198 (200)
                      +.|+++.|+|++++.+...+. |.+.....   + +...+++..++   +..+++.+.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~   58 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYN   58 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEec
Confidence            369999999999999999874 98875432   2 23345565554   577887653

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=85.32  E-value=4.5  Score=31.22  Aligned_cols=57  Identities=19%  Similarity=0.278  Sum_probs=39.2

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  136 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~  136 (200)
                      .+++|+.|.|.|++++.+.+.+ .|..+..... ........|+.- ++..++|++..+-
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~-~~~~~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKKPD-DGKMKGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeCCc-cCCceeEEEEECCCCCEEEEEECCCc
Confidence            4899999999999999999988 8998874322 111123345443 4557888875543

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=84.11  E-value=4.2  Score=27.04  Aligned_cols=50  Identities=12%  Similarity=0.143  Sum_probs=33.9

Q ss_pred             eeEEEEEECCHHHHHHHHH-HCCCeEEecCCC-ceEEEEECCCCCeEEEEEe
Q 029050          149 DRHTCIAIRDVSKLKMILD-KAGISYTLSKSG-RPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       149 ~~hi~f~v~dv~~~~~~l~-~~G~~~~~~~~g-~~~~~~~DPdGn~iEl~e~  198 (200)
                      +.|+++.|+|++++.+... -.|.+....... ....++..+++..++|...
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            3699999999999988886 568776543221 2345666555557777653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=83.83  E-value=6.8  Score=26.82  Aligned_cols=50  Identities=18%  Similarity=0.239  Sum_probs=35.2

Q ss_pred             eeEEEEEECCHHHHHHHHHH-CCCeEEecC---C--CceEEEEECC---CCCeEEEEEe
Q 029050          149 DRHTCIAIRDVSKLKMILDK-AGISYTLSK---S--GRPAIFTRDP---DANALEFTQV  198 (200)
Q Consensus       149 ~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~---~--g~~~~~~~DP---dGn~iEl~e~  198 (200)
                      +.|+++.|.|++++.+..++ .|.+.....   .  +....++.+.   +|..+++++.
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            57999999999999999876 698775432   1  1234555554   5678888764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.77  E-value=8.6  Score=26.30  Aligned_cols=49  Identities=20%  Similarity=0.268  Sum_probs=34.1

Q ss_pred             eeEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          149 DRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       149 ~~hi~f~v~dv~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +.|+++.|+|+++..+-..+ .|.+....    ..+....|+.-.+|..+++++
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   55 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMT   55 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEc
Confidence            47999999999999888876 57775321    123334455545677888875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=83.74  E-value=4.7  Score=27.83  Aligned_cols=46  Identities=15%  Similarity=0.248  Sum_probs=29.6

Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEE
Q 029050          150 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  195 (200)
Q Consensus       150 ~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl  195 (200)
                      .|+.+.|+|+++..+-.+..|.+......+...+.+..++|..+.+
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~l   47 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLAW   47 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEEE
Confidence            6899999999999888877888764432221233344444544433

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=83.62  E-value=9.3  Score=26.83  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.2

Q ss_pred             eeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECC--CCCeEEEEEe
Q 029050          149 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  198 (200)
Q Consensus       149 ~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP--dGn~iEl~e~  198 (200)
                      +.|+.+.|.|+++..+...+ .|.++.....+....|+..+  .+..+++++.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            57999999999999998876 79887654432234455443  3456776643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.06  E-value=6.2  Score=26.60  Aligned_cols=47  Identities=13%  Similarity=0.157  Sum_probs=33.3

Q ss_pred             EEEEEECCHHHHHHHHHH-CCCeEEecC---CCceEEEEECCCC--CeEEEEE
Q 029050          151 HTCIAIRDVSKLKMILDK-AGISYTLSK---SGRPAIFTRDPDA--NALEFTQ  197 (200)
Q Consensus       151 hi~f~v~dv~~~~~~l~~-~G~~~~~~~---~g~~~~~~~DPdG--n~iEl~e  197 (200)
                      |+++.|.|++++.+-..+ .|.++....   .+...+.+.++++  ..+++.+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   53 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAP   53 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeC
Confidence            789999999999998886 899886543   2344555666654  4555543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=82.75  E-value=5.8  Score=27.44  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=25.3

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeee
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEA  108 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~  108 (200)
                      .++.|+++.|.|++++.+.... .|.++...
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~~  100 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLIDE  100 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccCC
Confidence            4688999999999999998877 78887653

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=80.37  E-value=21  Score=26.49  Aligned_cols=74  Identities=18%  Similarity=0.153  Sum_probs=45.4

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEE------EEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW------LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~------l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      ++||.++|.+.+.+.+|-...+..--.-... .=.+.-..-      +.+++..+..++.+-+.. ...+  ..|.-||-
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen-~INGRPI~l~~L~qPl~~~~~~I~cvELP~P~~-k~Yp--~eGWEHIE   77 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSEN-EINGRPIALIKLEKPLQFAGWSISIVELPFPKD-KKYP--QEGWEHIE   77 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhcc-ccCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC-CCCC--CCCceEEE
Confidence            5899999999999999998765333221111 001111121      344677888888776543 1122  23578999


Q ss_pred             EEEC
Q 029050          154 IAIR  157 (200)
Q Consensus       154 f~v~  157 (200)
                      +.++
T Consensus        78 ~Vlp   81 (149)
T cd07268          78 IVIP   81 (149)
T ss_pred             EEec
Confidence            9887

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	200
3rmu_A	134	Crystal Structure Of Human Methylmalonyl-Coa Epimer		3e-06

>pdb|3RMU|A Chain A, Crystal Structure Of Human Methylmalonyl-Coa Epimerase, Mcee Length = 134

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVG---AEMIHLMEL 133
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G    E++H + L
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGL 62
Query: 134 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 188
            +P     +    G   H CI + +++   M L K  I        +   G+P IF    
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122
Query: 189 D 189
           D
Sbjct: 123 D 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	200
2p25_A	126	Glyoxalase family protein; structural genomics, MC	7e-32
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-28
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	8e-28
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-25
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-23
3ghj_A	141	Putative integron gene cassette protein; integron	1e-22
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	9e-22
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-20
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-19
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	7e-19
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	7e-18
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	3e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	4e-17
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-16
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-16
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	8e-16
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-14
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	5e-14
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	7e-14
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	7e-14
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	4e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-05
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	1e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-05
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-11
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	5e-11
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	1e-10
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-10
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-10
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	6e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-10
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-09
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	9e-09
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	3e-08
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	4e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	4e-08
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	5e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	8e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	7e-06
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	8e-08
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	9e-08
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-07
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	3e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	4e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-05
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	5e-07
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	9e-07
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	3e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	4e-06
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	5e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	5e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	5e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	3e-04
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	1e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	6e-05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	8e-05
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	1e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	1e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	1e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	1e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-04
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	2e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	3e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	3e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  110 bits (278), Expect = 7e-32
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
            +HHV I   N + +  FY   LG E+       +       L +G++ + +        
Sbjct: 5   EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPA 64

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALE 194
               PE  G  RH    +  + ++   L++ GI     +    +G+   F  DPD   LE
Sbjct: 65  RPSYPEALGL-RHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123

Query: 195 FTQ 197
             +
Sbjct: 124 LHE 126

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score =  101 bits (254), Expect = 3e-28
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 77  VVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 134
           +  + HV +       E +  FY   +G+E    +P +     G W   G + IH+    
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQ 66

Query: 135 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANA 192
           N +P         +  H    +  + + K  L K GI      +       +  DP  N 
Sbjct: 67  NFNP--------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNR 118

Query: 193 LEFTQ 197
           +EF +
Sbjct: 119 IEFME 123

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  100 bits (252), Expect = 8e-28
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------E 132
           VHHV ++  + ++S EFY N LG E+       K       L  G   + +         
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 133 LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDP 188
              P      P      RH    + DV   +  L   GI          +G+   F  DP
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDP 125

Query: 189 DANALEFTQ 197
           D   LE  +
Sbjct: 126 DGLPLELHE 134

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 94.5 bits (235), Expect = 4e-25
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           + S++H+ +   +L++S+ F+  +LGL ++           GA+L  G   + L      
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDLWVCLSYDEAR 55

Query: 137 DPLSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANAL 193
                 P       H    +   D   L   L++AG++    +KS   + +  DPD + L
Sbjct: 56  QY---VPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 194 EF 195
           E 
Sbjct: 113 EL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 88.7 bits (220), Expect = 4e-23
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +  ++H+ +   +L  S+ FY+++LG  +      +    +GA+L +G+  + L   P  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRL------EARWDQGAYLELGSLWLCLSREPQY 55

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 195
               G P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 56  ----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 88.1 bits (219), Expect = 1e-22
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
            +  V +  +NLE+S +FY  ILG E        +  +   W+   A M+ L E      
Sbjct: 28  GLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE------ 79

Query: 139 LSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANA 192
                +   + +H    +   ++  LK  L+  G+S     +       +++  DP+ +A
Sbjct: 80  ----EKENWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHA 135

Query: 193 LEFT 196
           LEFT
Sbjct: 136 LEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 86.1 bits (213), Expect = 9e-22
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEI------NEARPHDKLPYRGAWLWVGAE-MIHLME 132
           VHH+ +  ++++ S  FY  ILGL                   + A        ++ L  
Sbjct: 20  VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFG 79

Query: 133 LPNPDPLSGRPEH-GGRDRHTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTR 186
            P   P    PE    R  H    I      + +  + +  I+       RP    ++  
Sbjct: 80  EPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFY 139

Query: 187 DPDANALEFT 196
           DPD   +E  
Sbjct: 140 DPDGFMIEIR 149

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 78.6 bits (194), Expect = 3e-19
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +  V HV +   +L+ S  +Y  IL  +       D   +       G   I L E    
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGG 61

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDAN 191
                     G D H   ++  ++ L ++   L KAG ++T          +  RD D  
Sbjct: 62  GTDLFDETRPGLD-HLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNI 120

Query: 192 ALEF 195
           ALE 
Sbjct: 121 ALEA 124

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 78.7 bits (194), Expect = 7e-19
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN- 135
             ++    +  ++L+ +  FY+++ GLE        KLP +  +   G +M+ L +    
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQES 60

Query: 136 --PDPLSGRPEHGGRDR-HTCIAIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTR 186
              D  +  P HG   + H C       +V + K   +   I    Y    +G  +++ R
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIR 120

Query: 187 DPDANALEFTQ 197
           DP  N++E  +
Sbjct: 121 DPAGNSVEVGE 131

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 75.2 bits (185), Expect = 7e-18
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP- 138
           ++HV I   +LE++  FY+NILG +++EA P  +      ++ +G   + L+     D  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 139 --LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPD 189
                +    G   H CI + +++   M L K  I        +   G+P IF   +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 190 ANALEFTQ 197
              +E  Q
Sbjct: 126 GVLVELEQ 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 74.9 bits (184), Expect = 1e-17
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 135
           +  + H+  +  +LER     + +       A   ++    R  +  +G   + +M+   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 136 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 191
                   E         I   D  +    + K G+     +        +I+  D D +
Sbjct: 62  L------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNH 115

Query: 192 ALEF 195
             E 
Sbjct: 116 MFEL 119

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 73.2 bits (180), Expect = 3e-17
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 138
           VHH+G   +N++ +L+ ++ +  +E +E    +       ++  G   + L+     D P
Sbjct: 8   VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSP 67

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANA 192
           ++   + G    H C  + D+ K    + + G +         +   R   F    D   
Sbjct: 68  INKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGL 127

Query: 193 LEFTQ 197
           +E  +
Sbjct: 128 IELLE 132

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 73.9 bits (181), Expect = 4e-17
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +  + H+ +   ++  ++ FY+ +LG      + +         L  GA+ I+L +    
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR------KALIFGAQKINLHQQEME 74

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 189
                     G      I    ++ +   + +AGIS       R        +I+ RDPD
Sbjct: 75  FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134

Query: 190 ANALEFTQ 197
            N +E +Q
Sbjct: 135 GNLIEISQ 142

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 71.4 bits (175), Expect = 2e-16
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 135
           +  + H+ ++ ++L ++  F QNI   E   +         +  +  +    I +ME  +
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 136 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 191
                   E         I   +V +    +   G+     +        +I+  D D +
Sbjct: 62  L------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNH 115

Query: 192 ALEF 195
             E 
Sbjct: 116 LFEL 119

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 71.1 bits (174), Expect = 3e-16
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDP 138
           + HV +   NLE+  +FY    G   N+   +    +   +L       + +M   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDAN 191
            +     G    H  I+      +  +   L + G +      ++  G       DP+ N
Sbjct: 64  KTTGENLGW--AHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 192 ALEFT 196
            +E T
Sbjct: 122 RIEIT 126

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 70.0 bits (171), Expect = 8e-16
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +  + H+ +   ++  +  FY+ +LG++                L  G + I+L +L N 
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNE 61

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-------PAIFTRDPD 189
                +    G      I    +S     ++  G++       R        + + RDPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 190 ANALEF 195
            N +E 
Sbjct: 122 GNLIEV 127

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 67.2 bits (164), Expect = 2e-14
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-- 137
           + H+GI   +++  L FY   L L++           + A+L +G   I L+E  + +  
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 138 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDA 190
                 + G    H  I ++ + +    + + G+            G    F   R    
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARG 128

Query: 191 NALEFTQ 197
              EF +
Sbjct: 129 VLYEFCE 135

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 65.3 bits (159), Expect = 5e-14
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           +HHV I  ++LE S+ F+  +LG    E         RG     G   +  ++  +    
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYE-DYQS--WSRGKSYKHGKTYLVFVQTEDRFQT 77

Query: 140 SGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 189
                      H          V +L   L + G                  A+F  DP+
Sbjct: 78  PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPN 137

Query: 190 ANALEF 195
              +E 
Sbjct: 138 RIKVEI 143

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 65.1 bits (158), Expect = 7e-14
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 13/124 (10%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
            + H+ +  ++++ +  FY  ILG+E+   +           L  G +  +L E+     
Sbjct: 27  RLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFE 80

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDAN 191
                   G      I    + ++   L    +        R        +I+ RDPD N
Sbjct: 81  PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRN 140

Query: 192 ALEF 195
            +E 
Sbjct: 141 LIEV 144

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 65.3 bits (159), Expect = 7e-14
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLP------YRGAWLWV-- 123
           ++ + +V I+ E+L+ ++ F++  +GL +      E     ++          A +    
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 124 GAEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISYTLSKSGR 180
           G   I L     P  ++                  + D+ ++   L K G    + +  +
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQ 126

Query: 181 P-----AIFTRDPDANALEFTQ 197
                   + R  +   +   +
Sbjct: 127 YENSYRLCYIRGVEGILIGLAE 148

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 60.4 bits (146), Expect = 4e-12
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 85  ILCENLERSLEFYQNILGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSG 141
           + C ++  S  F+ ++LG E+   RP ++  Y    G  +     M+  +   +   LSG
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSG 65

Query: 142 RPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDP 188
             E   G   +    + D+  L   ++++                  S + +     + P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 189 DANALEFTQ 197
           D     F Q
Sbjct: 126 DGYLFRFCQ 134

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 62.8 bits (152), Expect = 4e-12
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMELP 134
           +HH+  +  + + + +FY  +LGL +     N   P     Y G     G     +   P
Sbjct: 9   IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGN--EGGKPGTIITFFP 66

Query: 135 NPDPLSGRPEHGGRDRHT-CIAIRDVSKLKMILDKAGISYTLSKS-GRPAIFTRDPDANA 192
                 G    G     +  +    ++  +  L+K  + YT  +  G   +   DP    
Sbjct: 67  WAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLH 126

Query: 193 LEFTQVD 199
           LE  + +
Sbjct: 127 LEIVERE 133

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 21/122 (17%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
                +L E  +++ +  +NI+GLE                      +I L   P     
Sbjct: 154 FGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGD---IGNVIDLKLTPIGRGQ 210

Query: 140 SGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGR---PAIFTRDPDANAL 193
            G     G   H      D              G   T     R    AI+ R+      
Sbjct: 211 MGA----GTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRNYFNAIYFREHGEILF 265

Query: 194 EF 195
           E 
Sbjct: 266 EI 267

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 61.6 bits (149), Expect = 1e-11
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL----PN 135
            HH+ ++ +N   +  FY+N+LGL   +   +   P     L+ G +             
Sbjct: 31  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEI 89

Query: 136 PDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPDA 190
           P                 + +     L   K   +K  + ++   + + RPA+   D + 
Sbjct: 90  PLVGRTYRGTNA-ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 148

Query: 191 NALEFTQVD 199
             L     +
Sbjct: 149 LRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           +  V +    L++       I G          +      +  +  E    + +   D  
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVVKYLDGP 235

Query: 140 SGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYTLSKSGR---PAIFTRDPDANAL 193
           + +P  G    H  I +++ ++L   +  + + G   +     R    +++ R+ +    
Sbjct: 236 TEKPGRGS-IHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILF 293

Query: 194 EFT 196
           E  
Sbjct: 294 EIA 296

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 57.2 bits (138), Expect = 5e-11
 Identities = 25/130 (19%), Positives = 38/130 (29%), Gaps = 13/130 (10%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG---AEMIHLMELP 134
            + +V I   ++     FYQ + G +  E+               +G    E   LM+L 
Sbjct: 8   DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA 67

Query: 135 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS-----YTLSKSGRPAIFTRDPD 189
                SG                 V KL  +   AG +     Y        A+   DP+
Sbjct: 68  QFSETSGIKFLLN---FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVL-LDPE 123

Query: 190 ANALEFTQVD 199
            N      V 
Sbjct: 124 RNVFRINNVL 133

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 57.2 bits (138), Expect = 5e-11
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 140
            +      ++ RS  FY++ LGL+I E      L   G  +  G  +   +   + D   
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDA-- 67

Query: 141 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFT 196
            +  +G R+        DV      +    +           G+      DPD +A+E  
Sbjct: 68  -QEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVFRFYDPDGHAIEVG 125

Query: 197 Q 197
           +
Sbjct: 126 E 126

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 55.9 bits (135), Expect = 1e-10
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 140
            H+ +   ++  + EF +   GL  +            A+  +      ++ L     + 
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGT-------RGNAFAVMRDNDGFILTL-----MK 52

Query: 141 GRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-AIFTRDPDANALE 194
           G+     +  H         ++  I  +    G      K       +   P    +E
Sbjct: 53  GKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 58.1 bits (140), Expect = 1e-10
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 25/129 (19%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           + S+  + +    L+R L FY N+LG +    +           + +G   I        
Sbjct: 24  MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRA---- 73

Query: 137 DPLSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP--------AIFTR 186
              +          H  I I      + K  L   G   T +   +         + +  
Sbjct: 74  ---AADGTKPF--YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVE 128

Query: 187 DPDANALEF 195
           DP  N +E 
Sbjct: 129 DPSGNIIEL 137

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 55.1 bits (132), Expect = 3e-10
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 16/125 (12%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
            V H+ I   +L+ + +FY   LG ++    P           +    + HL +  + + 
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYPD----RITLDFFGDQLVCHLSDRWDREV 64

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR--------PAIFTRDPDA 190
                  G     T    +    L  +  + GI +    S R           F  DP  
Sbjct: 65  SMYPRHFG----ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 191 NALEF 195
           N LEF
Sbjct: 121 NLLEF 125

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 54.2 bits (130), Expect = 6e-10
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 78  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 137
           + +  + I   +L+  L FY+ I+G +   A   DK                L  + NP 
Sbjct: 5   LLITSITINTSHLQGMLGFYR-IIGFQF-TASKVDKGSEVHR-AVHNGVEFSLYSIQNPQ 61

Query: 138 PLSGRPEHGGRDRHTCIAIRDVSK-LKMILDKAGISYTL----SKSGRPAIFTRDPDANA 192
                             I D+ K ++ ++   G    L       G+ AI   DPD ++
Sbjct: 62  R------SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIV-LDPDGHS 114

Query: 193 LEFTQVDG 200
           +E  +++G
Sbjct: 115 IELCELEG 122

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 54.7 bits (131), Expect = 7e-10
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 8/126 (6%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           +H   +  ++  ++  FY   LG  +    P     +         +   L+  P+    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 140 SG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANA 192
                             A+ D++     L   G+ +T           AI   D   N 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL-DDTCGNL 145

Query: 193 LEFTQV 198
           ++  Q+
Sbjct: 146 IQLMQI 151

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 51.8 bits (124), Expect = 5e-09
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 141
              +   +L  +LEFY+ +L   +  A   +          +   ++          ++G
Sbjct: 9   LSRLYVADLNPALEFYEELLETPV--AMRFEIPQTGVELAQISTILL----------IAG 56

Query: 142 RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEF 195
             E     R+T        + K K  L++ G           +GR     R  D + +E+
Sbjct: 57  SEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTV-RHSDGSVIEY 115

Query: 196 TQ 197
            +
Sbjct: 116 VE 117

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 51.4 bits (123), Expect = 9e-09
 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 20/142 (14%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRG---------AWL 121
            + +   +GI+  ++E SL+ Y    G+E       +        + G         A+ 
Sbjct: 16  DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF 75

Query: 122 WVGAEMIHLMELPNPD-PLSGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGIS--YTLSK 177
            +G   + L+E            +  G    H    ++D+ +    L + G+        
Sbjct: 76  ELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF 135

Query: 178 SGRPAIF--TRDPDANALEFTQ 197
            G    +  T       +E  +
Sbjct: 136 EGGRYAYIDTLRALKVMIELLE 157

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 49.5 bits (118), Expect = 3e-08
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 85  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 144
           +   +++ +L  + + LG E+     +       A+L +    + L+E P          
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY------AYLELSGCGLRLLEEPARKI----IP 62

Query: 145 HGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 196
            G      CI + D+    +KL   L+             P        R PD + L FT
Sbjct: 63  DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFT 122

Query: 197 Q 197
            
Sbjct: 123 A 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 49.6 bits (118), Expect = 4e-08
 Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
            V  + +   +LE S  FY    G       P         +  +   ++    + N   
Sbjct: 5   QVAVITLGIGDLEASARFYGEGFGWAPVFRNPE------IIFYQMNGFVLATWLVQNLQE 58

Query: 139 LSGRPEHGGRDRHT----CIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 190
             G                 A  +V+ L   L  AG          P      +  DPD 
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDG 118

Query: 191 NALEF 195
           +  E 
Sbjct: 119 HIWEI 123

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 141
            + I+  N+ +     ++IL  + + A          A   +G+  + L +         
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDG------FAQFTIGSHCLMLSQNH-----LV 56

Query: 142 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 197
             E+        I + DV +    L++ GI      +       ++  + P    L+F +
Sbjct: 57  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR 116

Query: 198 V 198
           +
Sbjct: 117 M 117

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE------MIHLMELPN 135
           H  I   +L+RS++FY   LG++    R  D    +   +++G        ++ L     
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMK--VLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 136 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKSGRPAIFTRDPD 189
                   +H     H  I + DV +L   + K  +      +SG  A F  DPD
Sbjct: 69  VTS----YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA-FVVDPD 118

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 50.2 bits (120), Expect = 8e-08
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 74  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 133
           + GV+   HV +   ++ ++LE Y  +LGL   +     ++  +                
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKA--------------W 47

Query: 134 PNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAI 183
              D  S             +  +      + +L+  L   G +     +G        +
Sbjct: 48  TEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRV 107

Query: 184 FTRDPDANALEF 195
             + P  +  E 
Sbjct: 108 RFQAPSGHHFEL 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 44.4 bits (105), Expect = 7e-06
 Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 22/132 (16%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 147 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 206

Query: 136 PDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT- 185
           P+         GR  H         D+ +   ++      I        R          
Sbjct: 207 PEK--------GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP---TRHGLTHGKTIY 255

Query: 186 -RDPDANALEFT 196
             DP  N  E  
Sbjct: 256 FFDPSGNRNEVF 267

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 48.5 bits (115), Expect = 8e-08
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 140
               +  +N   S +FY+ +LG++  E+ P         ++      + L      +P  
Sbjct: 27  DFTILYVDNPPASTQFYKALLGVDPVESSPT-----FSLFVLANGMKLGLWSRHTVEP-- 79

Query: 141 GRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKSGRP---AIFTRDPDANALE 194
            +    G        + + +++         +G++     +           DPD++ L 
Sbjct: 80  -KASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLR 138

Query: 195 FTQVDG 200
                G
Sbjct: 139 VYAFAG 144

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.5 bits (115), Expect = 9e-08
 Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 11/145 (7%)

Query: 61  ILKKEPIRDSDKIDYGVVSVHHVGIL-CENLERSLEFYQNILGLEINEARPHDKLPYRGA 119
           +  +  I+ S   + G V   +  +   +++++++++++ ILG   +     D+      
Sbjct: 2   LENERLIKMSRFSERGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYG 61

Query: 120 WLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS 176
            ++       + HL          G P  G       + I  +  L   + + G      
Sbjct: 62  CVFDYPSEVAVAHLTPFRGFHLFKGEPIKGV---AGFMMIEGIDALHKYVKENGWDQISD 118

Query: 177 KSGRP----AIFTRDPDANALEFTQ 197
              +P           D   L F +
Sbjct: 119 IYTQPWGARECSITTTDGCILRFFE 143

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-------------------RGAWL 121
               +  ++ ++SL+FY  +LGL + +      + +                   + AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 122 WVGAEMIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-L 175
           +     + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 176 SKSGRPAI--FTRDPD 189
              G+     F +DPD
Sbjct: 153 PDDGKMKGLAFIQDPD 168

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 17/119 (14%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHD------KLPYRGAWLWVGAEMIHLMELPN 135
           H  +   +L+RS++FY  +LG++    R  +       L + G        +I L     
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMK--LLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 136 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAI-FTRDPD 189
            D      E G    H  +++ + ++    + + G + T      K G   I F  DPD
Sbjct: 63  VDK----YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPD 117

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 75  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 134
           + +  +    +     + +L+F+   LG+ +   R    +  RG                
Sbjct: 7   FDIAHLARAELFSPKPQETLDFFTKFLGMYVTH-REGQSVYLRG--------------YE 51

Query: 135 NPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS---GRPAIFTR 186
           +P P S +            A+R      + +    L    +  T S+           +
Sbjct: 52  DPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQ 111

Query: 187 DPDANALEF 195
            PD + L+ 
Sbjct: 112 SPDGHNLQL 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 15/128 (11%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           V  + H+ ++  ++    + ++  LG    E R  D     GAW+        +  + + 
Sbjct: 151 VKRIDHLNLMSSDVTAVKDSFERHLGFRTTE-RVVDGNVEIGAWMSSNLLGHEVACMRDM 209

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT--RDP 188
               G+  H      T    +       +       I        +     + F    +P
Sbjct: 210 TGGHGKLHHLAFFYGT---GQHNIDAVEMFRDYDIQIEAGP---DKHGITQSQFLYVFEP 263

Query: 189 DANALEFT 196
             N +E  
Sbjct: 264 GGNRIELF 271

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 46.6 bits (110), Expect = 5e-07
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 140
           + V    +N  +S EFY+N+L  +  E+ P         ++      + L      +P +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPT-----FAMFVMKTGLRLGLWAQEEIEPKA 62

Query: 141 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEF 195
            +   G        +   V ++        IS     +           DPD + L  
Sbjct: 63  HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 45.8 bits (108), Expect = 9e-07
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------GAEMIHL 130
            + + HV   C + + + ++YQ   G        + +       +            + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 131 MELPNPD-PLSGRPEHGGRDR---HTCIAIRDVSKLKMILDKAGISY-----TLSKSGRP 181
           M   N +  ++             H    + D+  +   L + G+        L   G  
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 182 AIF--TRDPDANALEFTQ 197
             F   +      +E TQ
Sbjct: 127 INFMHPKSGKGVLIELTQ 144

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 45.7 bits (108), Expect = 3e-06
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +V   ++ I+  +L +S EFY ++LGL + E    + +  R               L   
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTE-EDENTIYLRS--------------LEEF 59

Query: 137 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYT-----LSKSGRPAIFTR 186
              +     G        A R     +V   +    + G          +K    ++   
Sbjct: 60  IHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVE 119

Query: 187 DPDANALEF 195
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 43.6 bits (103), Expect = 4e-06
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 16/124 (12%)

Query: 78  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 137
           V      I      R+  FY +ILG+ +  A  H              E    +      
Sbjct: 6   VRRVVANIATPEPARAQAFYGDILGMPV--AMDHG----WIVTHASPLEAHAQVSFAREG 59

Query: 138 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 193
                   G       I + +  ++   + KAG+               +F RDP    +
Sbjct: 60  G------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLI 113

Query: 194 EFTQ 197
               
Sbjct: 114 NILS 117

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           ++   +  ++  +L +S  FY ++LGL ++     +++  R                   
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSY-EDENQIYLRSFE--------------EF 59

Query: 137 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAIFTR 186
              +     G       +A R     DV K +    + G      K G       A+   
Sbjct: 60  IHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVE 119

Query: 187 DPDANALEF 195
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 43.3 bits (102), Expect = 5e-06
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 9/122 (7%)

Query: 81  HHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 137
               ++ E++ +SLEFY+  LG+EI    ++ PH +    G    +  + +  +   +P+
Sbjct: 6   SLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIR-LAWDTVETVRSYDPE 63

Query: 138 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 193
             +    H             V K    L  AG    L              +DPD N +
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 123

Query: 194 EF 195
           + 
Sbjct: 124 DL 125

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
           GV+   H  +   NLE  + FY+N+LGL         ++ ++              +   
Sbjct: 5   GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKC------------WD--E 50

Query: 136 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRP-----AIFT 185
            D                   +      + KL   L   G++ T   +G        +  
Sbjct: 51  RDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF 110

Query: 186 RDPDANALEF 195
             P  + +E 
Sbjct: 111 ELPSGHLIEL 120

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 23/132 (17%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELP 134
             + + H  +   N+    + +  +LG  + E     D     G WL    ++  +  + 
Sbjct: 148 APIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVE 207

Query: 135 NPDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT 185
            P+         G+  H          V +   I+      +        R         
Sbjct: 208 YPEK--------GKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGP---TRHGVTRGCTI 256

Query: 186 --RDPDANALEF 195
              DP  N  E 
Sbjct: 257 YAWDPSGNRFET 268

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 42.2 bits (99), Expect = 1e-05
 Identities = 15/122 (12%), Positives = 34/122 (27%), Gaps = 25/122 (20%)

Query: 87  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 146
             ++  ++EF+ + LG         D      A +      + +  + +           
Sbjct: 13  ARDVAEAVEFWTDRLGFSR--VFVEDDF----AGVVRDDVTLFISAVQDQVV-------- 58

Query: 147 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 195
             +    + +R + +L     +   +     SG                 RDP  N + F
Sbjct: 59  PDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHF 118

Query: 196 TQ 197
             
Sbjct: 119 VA 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
            V  + +VG   ++ +    FY ++ GLE       +   ++                  
Sbjct: 5   RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVG-EDANNAWFKAQG--------------A 49

Query: 136 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDA 190
            +    +      +R   IA+      DV  L+  ++ AG          PA+       
Sbjct: 50  DEHHVVQLRRADENRIDVIALAADSRSDVDALRASVEAAGCKVA----SEPAVLATPGGG 105

Query: 191 NALEFTQVDG 200
               F   DG
Sbjct: 106 YGFRFFSPDG 115

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
            V  + ++G+   NL+   ++   I+G+++ +    D++ Y                   
Sbjct: 3   KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRI-YLRMD--------------- 46

Query: 136 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 183
                      G D    I  R     ++ +L   L  AGI + ++             +
Sbjct: 47  RWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLV 106

Query: 184 FTRDPDANALEF 195
              DP  N  E 
Sbjct: 107 KLHDPGGNPTEI 118

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 39.9 bits (93), Expect = 8e-05
 Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 89  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 148
            L+  + FY+  L L+           Y G    +     HL E                
Sbjct: 21  QLDEIIRFYEEGLCLKR-IGEFSQHNGYDGVMFGLPHADYHL-EF-TQYEGGSTAPVPHP 77

Query: 149 DRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVDG 200
           D      + +  +L  I   L   G     S++       +   DPD   + F    G
Sbjct: 78  DSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG 135

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 27/123 (21%)

Query: 87  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 146
             ++  ++ F+ + LG E  +    D   +  A +  G   +H+    +        ++ 
Sbjct: 13  AVDVPANVSFWVDTLGFEK-DFGDRD---F--AGVRRGDIRLHISRTEHQIV----ADNT 62

Query: 147 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-----------FT-RDPDANALE 194
                  I + D   L     +A  +   + +  PA+           F  RDP  N + 
Sbjct: 63  S----AWIEVTDPDALHEEWARAVSTD-YADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 195 FTQ 197
           FT 
Sbjct: 118 FTA 120

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 87  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPE 144
             + + +  FY+  LG  I              W+ +  G  M+     P  DPL+    
Sbjct: 11  SRDFDSTAAFYER-LGFGIVFRDAG--------WMILQRGDLMLEFFAHPGLDPLASWFS 61

Query: 145 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR----------PAIFT-RDPDANAL 193
                   C+ + D+++        GI  T S   R            +    DPD   L
Sbjct: 62  -------CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 194 EFTQVD 199
              Q +
Sbjct: 115 RLIQNE 120

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 19/132 (14%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
            ++ +   +   N+ERS +FY+ I   E     P      R        + +  +     
Sbjct: 11  TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGE 64

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK------AGISYTLSKSGRP---AIFTRD 187
           +P++  P          I +     +  + ++        I                  D
Sbjct: 65  EPVAEIPRFS----EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISD 120

Query: 188 PDANALEFTQVD 199
           PD + +    +D
Sbjct: 121 PDGHIIRVCPLD 132

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 28/132 (21%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
            V+ + ++GI  ++ +    F  ++LGL++ +    D+   R                 +
Sbjct: 6   AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRM----------------D 49

Query: 136 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAI 183
                    H G+D    +  R     +   L   L  AG    +              +
Sbjct: 50  YWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLM 109

Query: 184 FTRDPDANALEF 195
            T DP  N  E 
Sbjct: 110 KTEDPGGNPTEI 121

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 83  VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR 142
           V +   + +R++++   + G  +   +P        A L  G  ++ +     P  +S  
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRH-ADLDTGGGIVMVRRTGEPYTVS-- 62

Query: 143 PEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKS---GRPAIFTRDPDANALEFTQ 197
              G   +   + + DV +  M    AG  I   L       R  +  RD + +  EFT+
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLV-RDLEGHLWEFTR 121

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 29/131 (22%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +  + ++G   +++     F    +GL        D   YR                 + 
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAG-SAGDAALYRA----------------DQ 44

Query: 137 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAIF 184
                  + G  D      +       + ++   L +AG+++T               + 
Sbjct: 45  RAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLC 104

Query: 185 TRDPDANALEF 195
            +DP    LE 
Sbjct: 105 LQDPFGLPLEI 115

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
           G   + HV +   +   +L FY+++LG  + ++                A +       N
Sbjct: 139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGC--N 196

Query: 136 PDPLS---GRPEHGGRDRHTCIAIRDVSKLKMILDKAG-----ISYTLSKSGR----PAI 183
           P   S             H  + +     + + LD+A      +S TL   GR      +
Sbjct: 197 PRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATL---GRHVNDLML 253

Query: 184 FT--RDPDANALEFT 196
               + P    +EF 
Sbjct: 254 SFYMKTPGGFDIEFG 268

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 28/132 (21%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
            + S+ ++ I   ++    E+   +LG+   +  P   L  R          + +     
Sbjct: 2   SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRM---DDFPARLVV----- 53

Query: 136 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 183
                     G  DR             + +++  LD  G  Y  + +           I
Sbjct: 54  --------VPGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMI 105

Query: 184 FTRDPDANALEF 195
              DP  N LE 
Sbjct: 106 RFADPSGNCLEV 117

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	200
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.91
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.88
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.87
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.87
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.86
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.86
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.86
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.86
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.86
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.85
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.85
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.85
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.85
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.84
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.84
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.83
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.83
3ghj_A	141	Putative integron gene cassette protein; integron	99.83
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.83
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.82
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.82
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.82
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.81
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.81
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.81
2i7r_A	118	Conserved domain protein; structural genomics cons	99.81
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.8
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.8
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.79
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.79
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.79
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.79
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.79
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.79
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.78
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.78
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.78
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.78
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.77
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.77
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.76
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.76
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.75
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.75
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.74
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.74
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.72
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.71
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.7
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.7
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.68
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.68
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.68
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.67
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.67
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.67
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.67
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.66
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.66
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.66
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.65
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.65
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.65
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.65
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.64
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.63
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.62
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.62
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.62
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.61
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.59
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.58
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.58
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.57
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.57
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.57
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.55
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.53
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.52
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.5
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.48
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.48
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.44
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.41
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.37
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.35
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.33
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.33
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.33
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.31
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.25
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.17
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.16
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.14
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.13
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.06
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.3
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.12
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.01
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.78
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.26
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	91.91
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	91.53
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	91.37
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	91.28
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	91.22
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	91.1
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	91.09
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	90.85
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	90.66
3ghj_A	141	Putative integron gene cassette protein; integron	89.44
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	89.32
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	89.16
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	89.07
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	88.11
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	87.03
2p25_A	126	Glyoxalase family protein; structural genomics, MC	86.23
3huh_A	152	Virulence protein STM3117; structural genomics, ny	86.14
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	85.81
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	84.97
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	84.47
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	84.2
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	83.78
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	83.51
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	82.99
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	82.75
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	81.54
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	81.03

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.91  E-value=4.4e-23  Score=147.84  Aligned_cols=123  Identities=25%  Similarity=0.329  Sum_probs=98.7

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEe-------cCCCCCCCCCCCCCC
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGG  147 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~-------~~~~~~~~~~~~~~~  147 (200)
                      |.+++++||.|.|+|++++++||+++|||++.............+++..++..++|+.       .+........+..+.
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            5688999999999999999999999999999876554444445678888999999988       333322222333556


Q ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          148 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +..|++|.|+|+++++++|+++|+++...    .+|.+.+||+|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            77899999999999999999999988543    346789999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.88  E-value=6e-22  Score=142.80  Aligned_cols=121  Identities=17%  Similarity=0.270  Sum_probs=95.2

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeec-CCCCCCceEEEEEeCCeEEEEEecCCCCCCCCC-CCCCCceeEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHTC  153 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~-~~~~~~~~hi~  153 (200)
                      ++++++||+|.|+|++++++||+ +|||++.... .....+...+|+..++..++|++.......... ...+.+.+|++
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            46799999999999999999999 9999997642 122334567888889999999886543221100 01156778999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCeEEEEE
Q 029050          154 IAIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~dv~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |.|+|+++++++|+++|+++...      .+|.+.+|++|||||+|||+|
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence            99999999999999999988542      256789999999999999997

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.87  E-value=1e-21  Score=139.53  Aligned_cols=122  Identities=20%  Similarity=0.250  Sum_probs=93.6

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      |++.+++|+.|.|+|++++++||+++|||++.............+++..++..++|+..+....... ...+.+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPS-YPEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCC-SSCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCC-CCCCccceEEEE
Confidence            5678999999999999999999999999999864321122223456888888888887554322111 123345679999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          155 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       155 ~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      .|+|+++++++|+++|+++...    ..|.+.+||+|||||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999987543    246689999999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.87  E-value=9.9e-21  Score=139.36  Aligned_cols=128  Identities=17%  Similarity=0.205  Sum_probs=97.1

Q ss_pred             CCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC------CCceEEEEEeCC-eEEEEEecCCCCCCCCC-C
Q 029050           72 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLSGR-P  143 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~------~~~~~~~l~~g~-~~~~l~~~~~~~~~~~~-~  143 (200)
                      .+.+++.+++||.|.|+|++++++||+++|||++........      .....+|+..++ ..++|+......+.... .
T Consensus        12 ~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           12 LAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             CCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTT
T ss_pred             cCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCC
Confidence            445678999999999999999999999999999986322111      111347788865 68899887654322211 1


Q ss_pred             CCCCceeEEEEEEC--CHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          144 EHGGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       144 ~~~~~~~hi~f~v~--dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ....+..|++|.|+  |+++++++|+++|+++...+   .+++.+||+|||||.|||++..
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence            23356789999999  99999999999999986432   4457999999999999999864

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.86  E-value=7.8e-22  Score=146.92  Aligned_cols=132  Identities=17%  Similarity=0.201  Sum_probs=102.6

Q ss_pred             CCCCCCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--------------CCCceEEEEEeCCeEEEEEec
Q 029050           68 RDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMEL  133 (200)
Q Consensus        68 ~~~~~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~l~~~  133 (200)
                      ......+..+.+++||+|.|+|++++++||+++|||++......+              ......+|+..|+..++|++.
T Consensus         8 ~~~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~   87 (159)
T 3gm5_A            8 HSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEP   87 (159)
T ss_dssp             -CCCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEE
T ss_pred             ccccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEE
Confidence            344556678899999999999999999999999999987543221              234567889999999999986


Q ss_pred             CCCCCCCCC--CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEec--CCCceEEEEECCC--CCeEEEEEeC
Q 029050          134 PNPDPLSGR--PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  199 (200)
Q Consensus       134 ~~~~~~~~~--~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPd--Gn~iEl~e~~  199 (200)
                      .........  ...+.+++|++|.|+|+++++++|+++|+++...  ..|.+.+||+|||  |++|||+|.+
T Consensus        88 ~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           88 DENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             CSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             CCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            443211000  1135578999999999999999999999998543  3577899999999  9999999974

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.86  E-value=2.3e-21  Score=138.79  Aligned_cols=123  Identities=26%  Similarity=0.409  Sum_probs=95.5

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCC---CCCCCceeEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHT  152 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~---~~~~~~~~hi  152 (200)
                      ++.+++||.|.|+|++++++||+++|||++......+..+...+|+..++..++|+...........   .....+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            3779999999999999999999999999998654433334567889999889999876544321110   1134567999


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCeEEEEEe
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQV  198 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~-----~~g~~~~~~--~DPdGn~iEl~e~  198 (200)
                      +|.|+|+++++++|+++|+++...     ..|.+.+|+  +|||||.|||+|.
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            999999999999999999987443     235566777  8999999999973

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.86  E-value=1e-20  Score=135.76  Aligned_cols=119  Identities=17%  Similarity=0.269  Sum_probs=95.0

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      .|.+.+++|+.|.|+|++++++||+++|||++....+      ..+++..++..+.+.......... ......+..|++
T Consensus         5 ~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~   77 (133)
T 3ey7_A            5 LMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINLHQLGNEFEPK-AQNVRVGSADLC   77 (133)
T ss_dssp             CCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSC-CTTCCTTCCEEE
T ss_pred             EeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCCEEEEEEcCCCCcccc-CCCCCCCccEEE
Confidence            3678899999999999999999999999999987642      346788898888888765442221 122334568999


Q ss_pred             EEECC-HHHHHHHHHHCCCeEEecC----C---CceEEEEECCCCCeEEEEEeC
Q 029050          154 IAIRD-VSKLKMILDKAGISYTLSK----S---GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       154 f~v~d-v~~~~~~l~~~G~~~~~~~----~---g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |.|+| +++++++|+++|+++...+    .   +.+.+||+|||||.|||+++.
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            99996 9999999999999875432    1   137899999999999999975

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.86  E-value=1.9e-20  Score=137.17  Aligned_cols=120  Identities=21%  Similarity=0.279  Sum_probs=93.0

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC----eEEEEEecCCCCCCCCCCCCCCce
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      .|.+.+++||.|.|+|++++++||+++|||++......+...+..+|+..++    ..++|+.......    ...+.+.
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~----~~~~~~~   78 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS----YKHDEAY   78 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC----CCCCCCc
Confidence            3678899999999999999999999999999987543222234557888774    5788877554221    1123467


Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEecCCCceEE-EEECCCCCeEEEEEe
Q 029050          150 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQV  198 (200)
Q Consensus       150 ~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~-~~~DPdGn~iEl~e~  198 (200)
                      .|++|.|+|+++++++|+++|+++... +|.+.+ ||+|||||.|||++.
T Consensus        79 ~h~~f~v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           79 GHIAIGVEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEH
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEc
Confidence            899999999999999999999998776 565555 999999999999985

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.86  E-value=1.7e-20  Score=134.12  Aligned_cols=117  Identities=21%  Similarity=0.310  Sum_probs=93.4

Q ss_pred             ceeceEeEEEEEc--CCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           75 YGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        75 ~~i~~l~hv~l~v--~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      |++.+++||.|.|  +|++++++||+++|||++........ .....|+..++..++|...+...        ..+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELK-KRGGCWFKCGNQEIHIGVEQNFN--------PAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGG-GGCCEEEEETTEEEEEEECTTCC--------CCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCccccc-CCCceEEEeCCEEEEEEecCCCC--------CCCceEE
Confidence            5688999999999  89999999999999999986432110 11347888888888887643211        1345799


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEEeCC
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      +|.|+|+++++++|+++|+++...+  +|.+.+||+|||||.|||+++.+
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENKN  126 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCCC
Confidence            9999999999999999999886543  46789999999999999998753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.85  E-value=3.1e-20  Score=137.08  Aligned_cols=120  Identities=21%  Similarity=0.323  Sum_probs=92.9

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      ..|.+.+++||.|.|+|++++++||+++|||++....+      ..+++..++..+.|.......... ......+..|+
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~~-~~~~~~g~~hi   89 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEPK-ASRPTPGSADL   89 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETTEEEEEEETTBCCSSC-CSSCCTTCCEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCCeEEEEeccCCcCCCc-CcCCCCCccEE
Confidence            34778999999999999999999999999999987632      346788898888888765432111 12223456899


Q ss_pred             EEEEC-CHHHHHHHHHHCCCeEEecC----C--C-ceEEEEECCCCCeEEEEEeC
Q 029050          153 CIAIR-DVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       153 ~f~v~-dv~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|.+. |+++++++|+++|+++...+    .  | .+.+||+|||||.|||++..
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  144 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYV  144 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecc
Confidence            99997 99999999999999874422    1  2 38899999999999999865

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.85  E-value=7.3e-21  Score=137.94  Aligned_cols=124  Identities=23%  Similarity=0.188  Sum_probs=93.1

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      |++.+++||.|.|+|++++++||+++|||++....+.....+..+++. ++..+.|+......... ......+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~-~~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDL-FDETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSC-CCTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccC-CCCCCCCcceEEE
Confidence            568899999999999999999999999999987654322223334455 67788888765432111 1123346689999


Q ss_pred             EE---CCHHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEEeCC
Q 029050          155 AI---RDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       155 ~v---~dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      .|   +|+++++++|+++|+++....  ..++.+||+|||||.|||++..+
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99   799999999999999875321  23489999999999999998753

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.85  E-value=9.8e-22  Score=146.21  Aligned_cols=122  Identities=15%  Similarity=0.201  Sum_probs=83.3

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-C-e-EEEEEecCCCCCCCC--CCCCCCcee
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-E-MIHLMELPNPDPLSG--RPEHGGRDR  150 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~-~-~~~l~~~~~~~~~~~--~~~~~~~~~  150 (200)
                      ..++++|+.|+|+|+++|++||+++|||++..+.+...  .....+... + . .+.+...........  ....+.+..
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~  100 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIP  100 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCce
Confidence            34579999999999999999999999999987554322  122222222 1 1 222222111111000  011234567


Q ss_pred             EEEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEEeC
Q 029050          151 HTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       151 hi~f~v~dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |++|.|+|+++++++|+++|+++..+   .++++.+||+|||||+|||+|..
T Consensus       101 ~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          101 AASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             EEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            99999999999999999999998543   24568899999999999999964

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=8.5e-20  Score=131.35  Aligned_cols=118  Identities=22%  Similarity=0.355  Sum_probs=90.7

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC----eEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      ++++|+.|.|+|++++++||+++|||++..........+..+|+..++    ..++|........    ...+.+..|++
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~   76 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----YELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSEEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----ccCCCCccEEE
Confidence            368999999999999999999999999987654333334567787764    5777775433221    11234668999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec----CCCc-eEEEEECCCCCeEEEEEeC
Q 029050          154 IAIRDVSKLKMILDKAGISYTLS----KSGR-PAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       154 f~v~dv~~~~~~l~~~G~~~~~~----~~g~-~~~~~~DPdGn~iEl~e~~  199 (200)
                      |.|+|+++++++|+++|+++...    ..|. +.+||+|||||.|||++..
T Consensus        77 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999999998653    2343 6799999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.85  E-value=3.4e-21  Score=144.11  Aligned_cols=125  Identities=18%  Similarity=0.285  Sum_probs=97.3

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCC--CCCCCceeEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHT  152 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~--~~~~~~~~hi  152 (200)
                      +++.+++||.|.|+|++++++||+++|||++.........+...+|+..|+..++|+...........  ...+.++.|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            34679999999999999999999999999998754433444577889999999999886544311100  1234578899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec-C----CCceEEEE--ECCCCCeEEEEEeC
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQVD  199 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DPdGn~iEl~e~~  199 (200)
                      +|.|+|+++++++|+++|+++... +    .|.+.+|+  +|||||+|||++..
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~  137 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKK  137 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecC
Confidence            999999999999999999998543 1    34566777  49999999999865

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.85  E-value=2e-20  Score=133.28  Aligned_cols=117  Identities=20%  Similarity=0.285  Sum_probs=91.4

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ++++||.|.|+|++++++||+++|||++.........+...+|+..+ +..++|+..+......  .....+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT--TGENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC--CSSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC--CcCCCceEEEEEEc
Confidence            46899999999999999999999999998754322333466777774 5688888766443221  11345568999999


Q ss_pred             CC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 029050          157 RD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       157 ~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~  196 (200)
                      +|   +++++++++++|+++...    .+|.+.+||+|||||.|||+
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            98   889999999999998653    24568899999999999997

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.84  E-value=1.9e-19  Score=130.34  Aligned_cols=111  Identities=23%  Similarity=0.383  Sum_probs=91.0

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      +.+++||.|.|+|++++++||+++|||++....+      ...|+..++..+.+...+..      +....+..|++|.|
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~v   69 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFGI   69 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEEE
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEEc
Confidence            6789999999999999999999999999987543      24678888888888765321      11234568999999


Q ss_pred             C--CHHHHHHHHHHCCCeEEecC-CCceEEEEECCCCCeEEEEEeC
Q 029050          157 R--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~--dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +  |+++++++++++|+++...+ .+++.++|+|||||.|||++..
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           70 AAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             cHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            8  99999999999999986643 3678999999999999999753

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.84  E-value=2e-19  Score=131.19  Aligned_cols=115  Identities=23%  Similarity=0.363  Sum_probs=92.8

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      ++.+++||.|.|+|++++++||+++|||++....+      ..+|+..++..+.|.......   ..+....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~~~   71 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ---YVPPQESDYTHYAFT   71 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCC---CCCGGGSCSCEEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCC---CCCCCCCCceEEEEE
Confidence            36789999999999999999999999999987643      246788888888887754321   112233456899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEecC-CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~--dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+  |+++++++|+++|+++...+ .+++.+||+|||||.|||++..
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            97  99999999999999986543 4678999999999999999853

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.83  E-value=1.4e-19  Score=138.10  Aligned_cols=125  Identities=15%  Similarity=0.199  Sum_probs=95.1

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC-------------------eEEEEEecCC
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN  135 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-------------------~~~~l~~~~~  135 (200)
                      ....+++||.|.|+|++++++||+++|||++..........+..+++..++                   ..++|+....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            445789999999999999999999999999988665555556677777654                   4778865433


Q ss_pred             CCCCC-CC----CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          136 PDPLS-GR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       136 ~~~~~-~~----~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ..... ..    .....+..|++|.|+|+++++++|+++|+++...+   .+++.+||+|||||.|||+|+.
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            21110 00    11224678999999999999999999999997654   2345689999999999999864

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.83  E-value=2.5e-19  Score=131.53  Aligned_cols=124  Identities=14%  Similarity=0.224  Sum_probs=93.0

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC-----------CCCCceEEEEEeCC--eEEEEEecCCCCCC--
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPL--  139 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~--~~~~l~~~~~~~~~--  139 (200)
                      +.+.+++|+.|.|+|++++++||++ |||++......           .......+++..++  ..++|+........  
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            4578999999999999999999999 99999864321           11233567788754  57888764322111  


Q ss_pred             -CCCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          140 -SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       140 -~~~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                       ......+.+..|++|.|+|+++++++|+++|+++...    .+|.+.+||+|||||.|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence             0112234466799999999999999999999998543    25668999999999999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.83  E-value=1.8e-19  Score=131.95  Aligned_cols=117  Identities=26%  Similarity=0.433  Sum_probs=87.8

Q ss_pred             CCCCCCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCC
Q 029050           68 RDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEH  145 (200)
Q Consensus        68 ~~~~~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~  145 (200)
                      +......|++.+++||.|.|+|++++++||+++|||++....+..    ..+|+..++  ..+.|...+..         
T Consensus        17 ~~~~~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~---------   83 (141)
T 3ghj_A           17 LYFQGVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR----RWNFLWVSGRAGMVVLQEEKEN---------   83 (141)
T ss_dssp             ---------CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT----TEEEEEETTTTEEEEEEECCSS---------
T ss_pred             hhhccCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC----cEEEEEecCCCcEEEEeccCCC---------
Confidence            333445678899999999999999999999999999998765321    346777764  57777765221         


Q ss_pred             CCceeEEEEEEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          146 GGRDRHTCIAIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       146 ~~~~~hi~f~v~--dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                       .+..|++|.|+  |+++++++|+++|+++...    ..+.+.+||+|||||.|||++.
T Consensus        84 -~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (141)
T 3ghj_A           84 -WQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTAL  141 (141)
T ss_dssp             -CCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEEC
T ss_pred             -CCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEEC
Confidence             23579999998  9999999999999988632    1356899999999999999863

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.83  E-value=1.9e-19  Score=132.52  Aligned_cols=118  Identities=18%  Similarity=0.299  Sum_probs=90.6

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      .|.+.+++||.|.|+|++++++||+++|||++....+      ...++..++..+.|........+... ....+..|++
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~~~-~~~~g~~~~~   94 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPKAA-HPVPGSLDIC   94 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSCCS-SCCTTCCEEE
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCcccC-CCCCCCceEE
Confidence            3678899999999999999999999999999986543      23567888888888875533221111 1223457899


Q ss_pred             EEEC-CHHHHHHHHHHCCCeEEecC---C---C-ceEEEEECCCCCeEEEEEe
Q 029050          154 IAIR-DVSKLKMILDKAGISYTLSK---S---G-RPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       154 f~v~-dv~~~~~~l~~~G~~~~~~~---~---g-~~~~~~~DPdGn~iEl~e~  198 (200)
                      |.+. |+++++++|+++|+++...+   .   | .+.+||+|||||.|||+++
T Consensus        95 ~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           95 LITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            9886 99999999999999875322   1   1 3589999999999999974

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.82  E-value=4.5e-19  Score=127.07  Aligned_cols=119  Identities=22%  Similarity=0.274  Sum_probs=88.9

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC--CeEEEEEecCCCCCCCCCCCCCCceeE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      .+++.+++||.|.|+|++++++||+++|||++....+... ......+..+  +..+.+........    +...++..|
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~   82 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYED----GRKPGGYTG   82 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCSS----CCCSCEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCccccc----ccCCCCeEE
Confidence            4568899999999999999999999999999987653211 1122334433  33677766442111    112245689


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEE
Q 029050          152 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       152 i~f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++|.|+|+++++++|+++|+++...    ++|.+.++|+|||||.|||+|
T Consensus        83 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           83 ISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999999998642    345699999999999999987

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.82  E-value=2.8e-19  Score=128.67  Aligned_cols=116  Identities=16%  Similarity=0.269  Sum_probs=88.2

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-eEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ++.+++|+.|.|+|++++++||+++|||++....+...... ...++..++..+.+...+...        ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~h~~~   72 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQ--------ERTYNHIAF   72 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSCC--------CCCSCEEEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCCC--------CCCeeEEEE
Confidence            36789999999999999999999999999986543211100 113677888788887643211        235689999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          155 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       155 ~v~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .|+  |+++++++++++|+++...+    ++++.+||+|||||.|||++..
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            995  99999999999999987643    3568999999999999999854

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.82  E-value=6e-19  Score=127.37  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=87.4

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      .+.+++||.|.|+|++++++||+++|||++....+      ..+++..+ +..+.|+......     +...++..|++|
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~~~   78 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEEP-----VAEIPRFSEIGI   78 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCCC-----CTTSCCCEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCCC-----cCCCCCcceEEE
Confidence            35689999999999999999999999999987544      22345544 5678887655211     122235589999


Q ss_pred             EECC---HHHHHHHHHH---CCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          155 AIRD---VSKLKMILDK---AGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       155 ~v~d---v~~~~~~l~~---~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .|+|   ++++++++++   +|+++..++   ..++.++|+|||||.|||++++
T Consensus        79 ~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           79 MLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             EESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEECC
T ss_pred             EeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeCC
Confidence            9986   9999999999   999986432   2338999999999999999875

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.82  E-value=2.9e-19  Score=130.03  Aligned_cols=114  Identities=15%  Similarity=0.271  Sum_probs=88.5

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-eEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +.+++|+.|.|+|++++++||+++|||++....+...... ...|+..++..+.++..+...        ..+..|++|.
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~--------~~~~~h~~~~   73 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA--------ERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS--------SCCSCEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCCC--------CCCeeEEEEE
Confidence            6789999999999999999999999999987643211110 112677888888887643211        2356899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEe
Q 029050          156 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       156 v~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |+  |+++++++++++|+++...+    ++.+.+||+|||||.|||.+.
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence            99  99999999999999886542    357889999999999999974

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.81  E-value=6.5e-20  Score=133.98  Aligned_cols=125  Identities=15%  Similarity=0.250  Sum_probs=94.0

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC------eEEEEEecCCCCCCCC--CCCCC
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSG--RPEHG  146 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~------~~~~l~~~~~~~~~~~--~~~~~  146 (200)
                      .++.+++||.|.|+|++++++||+++|||++.........+...+++..++      ..++|++.........  ....+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            357899999999999999999999999999987543222334567888876      6788887554321100  01122


Q ss_pred             --CceeEEEEEECCHHHHHHHHHHCCCeEEe-c----CCCceEEEE--ECCCCCeEEEEEeC
Q 029050          147 --GRDRHTCIAIRDVSKLKMILDKAGISYTL-S----KSGRPAIFT--RDPDANALEFTQVD  199 (200)
Q Consensus       147 --~~~~hi~f~v~dv~~~~~~l~~~G~~~~~-~----~~g~~~~~~--~DPdGn~iEl~e~~  199 (200)
                        .+..|++|.|+|+++++++|+++|+++.. .    .+|.+.+|+  +|||||.|||++..
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence              46789999999999999999999998862 2    234466666  99999999999864

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.81  E-value=1.2e-19  Score=135.66  Aligned_cols=120  Identities=18%  Similarity=0.313  Sum_probs=93.2

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCC-C---CCCCCCCCcee
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L---SGRPEHGGRDR  150 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~-~---~~~~~~~~~~~  150 (200)
                      +.+.+++||.|.|+|++++++||+++|||++....+.     ..+|+..|+..+.++....... .   ......+.+..
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~   78 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQG   78 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCccee
Confidence            4678999999999999999999999999999876542     3567888887777775332211 0   01112233568


Q ss_pred             EEEEEE---CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEEeC
Q 029050          151 HTCIAI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       151 hi~f~v---~dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |++|.|   +|+++++++|+++|+++...   ..+.+.+||+|||||.|||++..
T Consensus        79 hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           79 HFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            999999   79999999999999988543   24789999999999999999853

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.81  E-value=9.3e-20  Score=134.54  Aligned_cols=119  Identities=17%  Similarity=0.123  Sum_probs=90.3

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCC-CCCCceeEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC  153 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~-~~~~~~~hi~  153 (200)
                      |++.+++|+.|.|+|++++++||+++|||++....+      ..+++..++..+.|+...........+ ..+.+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEE
Confidence            456789999999999999999999999999886542      346778888888888753210000000 0123457999


Q ss_pred             EEE---CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          154 IAI---RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       154 f~v---~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |.|   +|+++++++|+++|+++...    +.|.+.+||+|||||.|||++.+
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999   79999999999999998543    23668999999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.81  E-value=6.6e-19  Score=124.43  Aligned_cols=112  Identities=17%  Similarity=0.223  Sum_probs=85.4

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      .++++|+.|.|+|++++++||+++|||++....+      ..+++..++..+.+..... .+   ....+.+ .|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~-~~---~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHL-VP---LENFQSG-IIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCS-SS---CCCCCSC-EEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEcCCC-CC---cccCCCe-EEEEEEE
Confidence            3589999999999999999999999999976433      2466788877665533211 11   1112223 5899999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          157 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|+++++++|+++|+++..+    +.|.+.++|+|||||.|||++.+
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            99999999999999987443    34668999999999999999863

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.80  E-value=1.2e-18  Score=132.81  Aligned_cols=126  Identities=16%  Similarity=0.212  Sum_probs=91.4

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-------------------CeEEEEEecC
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELP  134 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-------------------~~~~~l~~~~  134 (200)
                      .+.+.+++|+.|.|+|++++++||+++|||++..........+...++..+                   +..++|+...
T Consensus        26 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           26 STKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             CccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            345779999999999999999999999999998654322222334455543                   3578887643


Q ss_pred             CCC--CCCC---CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          135 NPD--PLSG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       135 ~~~--~~~~---~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ...  +...   ......+..|++|.|+|+++++++|+++|+++...+   .+.+.+||+|||||.|||++..
T Consensus       106 ~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          106 GTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             TGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            311  1000   011124568999999999999999999999987643   2446799999999999999854

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.80  E-value=2.2e-18  Score=124.36  Aligned_cols=112  Identities=22%  Similarity=0.261  Sum_probs=84.8

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ..+++||.|.|+|++++++||+++|||++....+      ..+.+..++..+.+........    + ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~~----~-~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWDR----E-VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSCS----S-CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCcccc----c-CCCCCCeEEEEE
Confidence            4689999999999999999999999999976543      2244565566666665443221    1 223457999998


Q ss_pred             C---CHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCeEEEEEeC
Q 029050          157 R---DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~--------~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .   |+++++++|+++|+++..+        ..+.+.+||+|||||.|||.++.
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            6   5999999999999988442        12347899999999999999874

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.80  E-value=9.4e-19  Score=129.39  Aligned_cols=114  Identities=18%  Similarity=0.202  Sum_probs=85.9

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +.+++||.|.|+|++++++||+++|||++....+      ..+++.. ++..+.|+......+.   +....+..|++|.
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f~   74 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSFQ   74 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEEE
Confidence            5689999999999999999999999999987643      3456776 5678888765443221   1122345799999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~d---v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+|   +++++++|+++|+++...+   ..++.++|+|||||.|||++..
T Consensus        75 v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           75 VNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcC
Confidence            987   9999999999999985432   2348899999999999999865

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.79  E-value=1.1e-18  Score=128.48  Aligned_cols=119  Identities=19%  Similarity=0.242  Sum_probs=91.0

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHH---HhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCcee
Q 029050           74 DYGVVSVHHVGILCENLERSLEFY---QNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      .+.+.+++||.|.|+|++++++||   +++|||++....+.     ...|+. ++..+.|+................+..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~   88 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGLN   88 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSCC
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCce
Confidence            456789999999999999999999   99999999876542     225666 777888887653110001111223568


Q ss_pred             EEEEEEC---CHHHHHHHHHHCCCeEEec-C------CCceEEEEECCCCCeEEEEEe
Q 029050          151 HTCIAIR---DVSKLKMILDKAGISYTLS-K------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       151 hi~f~v~---dv~~~~~~l~~~G~~~~~~-~------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |++|.|+   |+++++++|+++|+++... +      ++.+.+||+|||||.|||+++
T Consensus        89 hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           89 HLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            9999999   9999999999999998652 1      246789999999999999874

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.79  E-value=2.4e-18  Score=124.02  Aligned_cols=111  Identities=18%  Similarity=0.258  Sum_probs=81.3

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEE-eCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ..++||.|.|+|++++++||++ |||++....... .  ..+++. .++..+.|.......     . ...+..|++|.|
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~-~--~~~~~~~~~~~~l~l~~~~~~~-----~-~~~~~~~l~f~v   74 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKVDK-G--SEVHRAVHNGVEFSLYSIQNPQ-----R-SQIPSLQLGFQI   74 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS-----S-CCCCSEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCC-C--CEEEEEeCCCeEEEEEECCCCc-----C-CCCCceEEEEEe
Confidence            4799999999999999999999 999987652211 1  224565 577777776543311     1 122336899999


Q ss_pred             CCHHHHHHHHHHCCCe-EEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          157 RDVSKLKMILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~-~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|+++++++++++|++ +..+    ++|.+ ++|+|||||+|||.+..
T Consensus        75 ~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~  121 (128)
T 3g12_A           75 TDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELE  121 (128)
T ss_dssp             SCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC--
T ss_pred             CCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEec
Confidence            9999999999999999 6432    24555 99999999999999864

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.79  E-value=1.3e-18  Score=122.80  Aligned_cols=108  Identities=18%  Similarity=0.213  Sum_probs=82.3

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC---eEEEEEecCCCCCCCCCCCCCCceeE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~---~~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      |.+.++ |+.|.|+|++++++||+++|||++....+      ...++..++   ..+.+.....         ......|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~~   67 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGG---------SGTDVPD   67 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSB---------TTBCCCS
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCC------EEEEEecCCCCcEEEEEEcCCC---------CCCceeE
Confidence            668889 99999999999999999999999987421      234555543   2444443211         1123469


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          152 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       152 i~f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++|.|+|+++++++++++|+++...    +.|.+.+||+|||||.|||++.
T Consensus        68 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           68 LSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            9999999999999999999987432    3456899999999999999985

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.79  E-value=1.4e-18  Score=126.21  Aligned_cols=119  Identities=20%  Similarity=0.251  Sum_probs=88.1

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCCC--CCCCCCCCCCceeEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD--PLSGRPEHGGRDRHTC  153 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~~--~~~~~~~~~~~~~hi~  153 (200)
                      +++++|+.|.|+|++++++||++ |||++....+..    ..+.+.. ++..+.|+......  .+...+..+.+..|++
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~   76 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   76 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEE
Confidence            46899999999999999999998 999987654311    1344555 56678887632110  0000112334568999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeCC
Q 029050          154 IAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       154 f~v~---dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      |.|+   |+++++++|+++|+++...    ++|.+.+||+|||||.|||++..|
T Consensus        77 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           77 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCc
Confidence            9999   9999999999999988543    346689999999999999998754

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.79  E-value=7e-18  Score=122.23  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=87.0

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCcee-EEEEEECCH
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV  159 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-hi~f~v~dv  159 (200)
                      -.|.|.|+|++++++||+++|||++....+.+ .....+.+..++..+.|.........   ...++... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---SCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---EECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---cCCCCCcEEEEEEEeCCH
Confidence            35889999999999999999999999765433 22334567778888888764322111   11222234 999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          160 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       160 ~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++++++++++|+++...    .+|.+.++|+|||||.|||+++.
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            99999999999998543    35668999999999999999863

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.78  E-value=6.7e-18  Score=120.62  Aligned_cols=108  Identities=12%  Similarity=0.149  Sum_probs=85.4

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      .....|+.|.|+|++++++||+++|||++....+      ..+++..++..++|...+...        .++..|++|.|
T Consensus         3 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (124)
T 1xrk_A            3 KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQV--------VPDNTQAWVWV   68 (124)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTT--------TGGGCEEEEEE
T ss_pred             cccceeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECCEEEEEEcCCCCC--------CCCceEEEEEE
Confidence            3456899999999999999999999999987522      235677788888887654311        12336999999


Q ss_pred             CCHHHHHHHHHHC------CC--eEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          157 RDVSKLKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~dv~~~~~~l~~~------G~--~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|+++++++++++      |+  ++..+    ++| +.++|+|||||.|||.+..
T Consensus        69 ~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           69 RGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             ECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEEec
Confidence            9999999999999      99  76543    234 8999999999999999864

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.78  E-value=1.7e-18  Score=127.29  Aligned_cols=114  Identities=16%  Similarity=0.215  Sum_probs=88.5

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      .+++||.|.|+|++++++||+++|||++....+      ..+++..+ +..+.|+......+.   +....+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~~---~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEPK---ASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSSC---CCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCCc---cCCCCCceEEEEEe
Confidence            489999999999999999999999999986542      23567776 467888765433211   12234568999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeCC
Q 029050          157 R---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      +   |+++++++|+++|+++...+   .+++.+||+|||||.|||+++.+
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecCC
Confidence            7   58999999999999875432   23488999999999999999764

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.78  E-value=5.6e-18  Score=122.69  Aligned_cols=110  Identities=21%  Similarity=0.252  Sum_probs=82.7

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCH
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  159 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv  159 (200)
                      --++.|.|+|++++++||+++|||++....+      ..+++..++..++|........   .+.. .+..|++|.|+|+
T Consensus         8 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~---~~~~-~~~~~l~~~v~dv   77 (134)
T 3fcd_A            8 QITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKI---IPDG-IARVAICIDVSDI   77 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSCH
T ss_pred             cceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCc---CCCC-CceEEEEEEeCCH
Confidence            4457899999999999999999999987654      2477888888898887654321   1111 2336999999999


Q ss_pred             HHHHHHHHHCCC----eE----EecCCCceEEEEECCCCCeEEEEEeC
Q 029050          160 SKLKMILDKAGI----SY----TLSKSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       160 ~~~~~~l~~~G~----~~----~~~~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++++++++++|+    ++    ...++|.+.++|+|||||.|||.+..
T Consensus        78 ~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           78 DSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            999999996654    32    22345668999999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.78  E-value=7.2e-18  Score=124.10  Aligned_cols=120  Identities=13%  Similarity=0.124  Sum_probs=82.2

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCC---CCCCCCCCCCCceeEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP---DPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~---~~~~~~~~~~~~~~hi~  153 (200)
                      ..+|.||.|.|+|+++|++||++ ||+........+.   ...+...++..+.+......   ......+....+..|++
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   82 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES---CACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVC   82 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT---EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEE
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc---eeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEE
Confidence            35789999999999999999998 5665554433222   23333444555555442211   11111122334457999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEEeCC
Q 029050          154 IAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       154 f~v~---dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      |.|.   ++++++++++++|+++...   .++++++||+|||||+|||+.++|
T Consensus        83 ~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           83 VSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEECh
Confidence            9996   6789999999999998654   356789999999999999998764

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.77  E-value=1.6e-18  Score=128.11  Aligned_cols=119  Identities=13%  Similarity=0.089  Sum_probs=85.5

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCC--CCCCCCceeEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTC  153 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~  153 (200)
                      +..+++||.|.|+|++++++||+++|||++....+     ...+++..++..++|+..........  ......+ .|++
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~   95 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIPD-----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVT   95 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEETT-----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEE
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEECCC-----CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEE
Confidence            34689999999999999999999999999987321     13467777765443333222110000  0000123 4999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEecC---C-CceEEEEECCCCCeEEEEEeCC
Q 029050          154 IAIRDVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       154 f~v~dv~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      |.|+|+++++++|+++|+++...+   . .++.+||+|||||.|||+++.+
T Consensus        96 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           96 VDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence            999999999999999999985432   2 2589999999999999998753

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.77  E-value=2.8e-18  Score=126.34  Aligned_cols=114  Identities=14%  Similarity=0.232  Sum_probs=84.1

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      |.+.++. +.|.|+|++++++||+++|||++..+..........  ...++  ++++..+....      ...+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~--~~~~~--~~l~~~~~~~~------~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVEL--AQIST--ILLIAGSEEAL------KPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEE--EEETT--EEEEESCHHHH------GGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEE--EEecc--EEEecCCcccC------CCCcceEEEE
Confidence            4577788 999999999999999999999988765432222222  33444  55555432110      1123479999


Q ss_pred             EECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          155 AIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       155 ~v~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .|+|+++++++|+++|+++...+   .+++.+||+|||||.|||++..
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            99999999999999999985542   3348899999999999999864

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.76  E-value=1.2e-17  Score=121.62  Aligned_cols=116  Identities=17%  Similarity=0.112  Sum_probs=84.9

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCC---CCCCCCCCCCCCceeEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~---~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +++|+.|.|+|++++++||+++|||++......+    ..+++..++..+.+.....   ..........+.+ .|++|.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~~f~   82 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP----IFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK-FLLNFD   82 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT----TEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCC-EEEEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC----ceEEeecCCEEEEEcCccccccccccccCCCCCCe-EEEEEE
Confidence            8999999999999999999999999997543211    1345666766776654210   0000001112233 599999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          156 IR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~---dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+   |+++++++|+++|+++...    ++|.+.+||+|||||.|||++..
T Consensus        83 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           83 VDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            99   5999999999999987543    24678999999999999999864

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.76  E-value=6.9e-17  Score=115.51  Aligned_cols=106  Identities=20%  Similarity=0.273  Sum_probs=84.0

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCH
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  159 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv  159 (200)
                      ..++.|.|+|++++++||++ |||++....+      ..+++..++..++|...+...     +  ..+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-----~--~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLD-----P--LASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCC-----G--GGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecCC------CEEEEEeCCEEEEEEeCCCCC-----C--CCcceEEEEEECCH
Confidence            46799999999999999998 9999987521      345678888888887654321     1  12457999999999


Q ss_pred             HHHHHHHHHCCCeE-------Eec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          160 SKLKMILDKAGISY-------TLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       160 ~~~~~~l~~~G~~~-------~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++++++++++|+++       ...    ++|.+.++|+|||||.|||.+..
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999999999983       322    24668999999999999999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.75  E-value=8.3e-18  Score=117.70  Aligned_cols=106  Identities=16%  Similarity=0.234  Sum_probs=82.4

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC-eEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ++++||.|.|+|++++++||+++|||++....+.     ..+|+..++ ..+.+.......        ..+..|++|.|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCCC-----cEEEEEcCCCcEEEEEeCCCCC--------CCceeEEEEEc
Confidence            4789999999999999999999999999865321     346677654 467777643211        13457999999


Q ss_pred             ---CCHHHHHHHHHHCCCeEEecC-CCceEEEEECCCCCeEEEE
Q 029050          157 ---RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       157 ---~dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdGn~iEl~  196 (200)
                         +|+++++++++++|+++.... .+++.+||+|||||.|||+
T Consensus        69 ~~~~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence               799999999999999874321 2368899999999999997

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.75  E-value=1e-17  Score=121.71  Aligned_cols=116  Identities=12%  Similarity=0.144  Sum_probs=83.3

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ...||.|.|+|++++++||+++|||++...... ...+..+++..++.  .+++.......+    ...+.+..|++|.|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~~v   85 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFYV   85 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEEC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCC----CCCCCCccEEEEEe
Confidence            567888999999999999999999999865432 12345567776643  466655433221    11233557999999


Q ss_pred             CCH---HHHHHHHHHCCCeEE--ecC-CCceEEEEECCCCCeEEEEEeC
Q 029050          157 RDV---SKLKMILDKAGISYT--LSK-SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~dv---~~~~~~l~~~G~~~~--~~~-~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|+   ++++++|+++|+++.  ..+ .+....||+|||||.|||++..
T Consensus        86 ~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           86 PNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             CCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            999   999999999999987  321 1112247999999999999753

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.74  E-value=1.5e-17  Score=118.42  Aligned_cols=104  Identities=17%  Similarity=0.197  Sum_probs=82.6

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCH
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  159 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv  159 (200)
                      ..++.|.|+|++++++||+++|||++....+      ..+++..++..++|.......       . +...|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-------~-~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQI-------V-ADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHH-------H-HTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCCC------CEEEEEECCEEEEEEcCCCCC-------C-CCceEEEEEECCH
Confidence            3468999999999999999999999987521      246677888888887643211       1 1226999999999


Q ss_pred             HHHHHHHHHC------CC--eEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          160 SKLKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       160 ~~~~~~l~~~------G~--~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++++++++++      |+  ++...    ++| +.++|+|||||.|||.+.
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEecC
Confidence            9999999999      99  76543    244 889999999999999985

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.74  E-value=6.9e-17  Score=134.66  Aligned_cols=122  Identities=16%  Similarity=0.256  Sum_probs=92.0

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceEEEEEeC----CeEEEEEecCCCCCCCCCCCCCCce
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g----~~~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      |.+.+++||.|.|+|++++++||+++|||+++.+..... ......++...    +..+.|+..+....  ..+ ..+++
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~--~~~-~~~~~   80 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ--GVI-GDGQV   80 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB--CBC-CBSEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC--CCC-CCCce
Confidence            468899999999999999999999999999987643221 11222333322    35788887654321  111 22457


Q ss_pred             eEEEEEEC--CHHHHHHHHHHCCCeEEe-cCCCceEEEEECCCCCeEEEEEeC
Q 029050          150 RHTCIAIR--DVSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       150 ~hi~f~v~--dv~~~~~~l~~~G~~~~~-~~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .|++|.|+  |+++++++|+++|+++.. ...+.+.+||+|||||.|||++..
T Consensus        81 ~hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           81 GVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             EEEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            89999999  999999999999998764 345778999999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.72  E-value=1.1e-16  Score=117.19  Aligned_cols=114  Identities=18%  Similarity=0.238  Sum_probs=82.3

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCC-C---CCCCCCCCceeEEEEEE
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L---SGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~-~---~~~~~~~~~~~hi~f~v  156 (200)
                      -.+.|.|+|++++++||+++|||++....+..    ..+++..++..+.|........ .   ......+.+. +++|.|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v   81 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQWDV   81 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETTEEEEEEEC-----------CCSSTTTTE-EEEEEC
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCce-EEEEEE
Confidence            35889999999999999999999998533211    2367888888888886522111 0   0111222344 599999


Q ss_pred             CCHHHHHHHHHH-CCCeEEec-----------CCCceEEEEECCCCCeEEEEEeC
Q 029050          157 RDVSKLKMILDK-AGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~dv~~~~~~l~~-~G~~~~~~-----------~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|+++++++|++ +|+++...           .++.+.++|+|||||.|||++..
T Consensus        82 ~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           82 IDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             SCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999 99987532           23458899999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.71  E-value=2.4e-16  Score=131.38  Aligned_cols=117  Identities=16%  Similarity=0.170  Sum_probs=89.1

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCceeE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      ...+.+|+||.|.|+|++++.+||+++|||+.....+      ...++..|+  ..+++...++...  ..+ ..++++|
T Consensus       148 ~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~~~l~l~~~~~~~~--~~~-g~g~~~H  218 (335)
T 3oaj_A          148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIGR--GQM-GAGTVHH  218 (335)
T ss_dssp             TTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSSSCEEEEESSCCCB--CBC-SBTEEEE
T ss_pred             hhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCCcEEEEEeCCCCCc--CCC-CCcceEE
Confidence            4578999999999999999999999999999987643      123455543  4677776443221  112 2246789


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEEeC
Q 029050          152 TCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       152 i~f~v~d---v~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +||.|+|   ++++.++|+++|+.+...  +...+++||+|||||+|||.+..
T Consensus       219 iAf~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          219 IAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeCC
Confidence            9999997   667899999999987532  34568999999999999999863

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.70  E-value=1.7e-16  Score=127.46  Aligned_cols=110  Identities=18%  Similarity=0.230  Sum_probs=87.7

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      ...+.+++||.|.|+|++++++||+++|||++....+      ..+++..++..+.|...+..         +.+..|++
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~---------~~~~~hia   85 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG---------TKPFYHIA   85 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT---------CCCCCEEE
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC---------CCCeeEEE
Confidence            3456799999999999999999999999999987644      34778888888888775422         12468999


Q ss_pred             EEEC--CHHHHHHHHHHCCCeEEe---------cCCCceEEEEECCCCCeEEEEEeC
Q 029050          154 IAIR--DVSKLKMILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       154 f~v~--dv~~~~~~l~~~G~~~~~---------~~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |.|+  ++++++++|+++ +++..         ..++.+.+||+|||||.|||++..
T Consensus        86 f~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           86 INIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             EEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             EEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            9996  799999999999 98854         235678999999999999999853

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.70  E-value=1.5e-17  Score=120.86  Aligned_cols=114  Identities=18%  Similarity=0.144  Sum_probs=79.5

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEE-----Ee-cCCCCCCCCCCCCCCce
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL-----ME-LPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l-----~~-~~~~~~~~~~~~~~~~~  149 (200)
                      .+++++|+.|.|+|++++++||+++|||++....+      ...++. ++..++.     .. .+....  .....+.+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~-~g~~l~~~~~~~~~~~~~~~~--~~~~~~~~~   75 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG------SFVLFE-TGFAIHEGRSLEETIWRTSSD--AQEAYGRRN   75 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS------SEEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCSS
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC------CcEEEe-ccceeccCchhhhhccccCCc--cccccCCCc
Confidence            45789999999999999999999999999986542      112232 2323321     01 000110  011123456


Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          150 RHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       150 ~hi~f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .|++|.|+|++++++++++ |+++..+    +.|.+.++|+|||||.|||.+..
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            8999999999999999999 9987543    24568999999999999999863

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.68  E-value=2.5e-16  Score=131.24  Aligned_cols=115  Identities=14%  Similarity=0.191  Sum_probs=89.3

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      .+.+.+++||.|.|+|++++++||+++|||++..... +.......|+..++.  .+.+......        ..++..|
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~~--------~~~~~~H  218 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMTG--------GHGKLHH  218 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTTS--------CCSEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCCC--------CCCceeE
Confidence            4578999999999999999999999999999987644 222235678887653  4666552211        2246799


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          152 TCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       152 i~f~v~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++|.|+|   +++++++|+++|+++..++     .+.+.+||+|||||.|||++
T Consensus       219 iaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  272 (339)
T 3lm4_A          219 LAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFG  272 (339)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEE
Confidence            9999998   8888999999999986542     23477999999999999984

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.68  E-value=4.1e-16  Score=126.99  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=84.8

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      |++++||.|.|+|++++++||+++|||++....+      ..+++..++..+.+...+..         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEe
Confidence            6789999999999999999999999999987543      23567766543322222111         13568999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEeC
Q 029050          157 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +   |+++++++|+++|+++...+       .+.+.+||+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            8   99999999999999886432       4678999999999999999753

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.68  E-value=4.8e-16  Score=114.18  Aligned_cols=114  Identities=13%  Similarity=0.122  Sum_probs=76.0

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeee-cCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE--
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT--  152 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~-~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi--  152 (200)
                      .+.+++|+.|.|+|++++++||+++|||++... ...+.    ..++  | ..++|. ......  ..........++  
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~----~~~~--g-~~l~l~-~~~~~~--~~~~~~~~~~~~g~   87 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG----FGDY--G-CVFDYP-SEVAVA--HLTPFRGFHLFKGE   87 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS----CEEE--E-EEESSC-TTTTSC--C--CCCSEEEEESC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC----ccEE--c-cEEEEe-ccCCCc--ccccccccceeecc
Confidence            367899999999999999999999999999642 21111    1333  2 223331 111110  000000111122  


Q ss_pred             ------EE-EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          153 ------CI-AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       153 ------~f-~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                            +| .|+|+++++++|+++|+++...    ++|.+.+||+|||||.|||.++.
T Consensus        88 ~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           88 PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence                  55 8999999999999999987543    34668899999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.67  E-value=4.9e-16  Score=129.12  Aligned_cols=117  Identities=12%  Similarity=0.069  Sum_probs=88.0

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC-----------CCCceEEEEEeCC----eEEEEEecCCCCC
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVGA----EMIHLMELPNPDP  138 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~----~~~~l~~~~~~~~  138 (200)
                      .|.+++++||+|.|+|++++++||+++|||++..+....           ......+|+..+.    ..++|....... 
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~-  100 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG-  100 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC-
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC-
Confidence            466789999999999999999999999999998755433           2334456676642    356666543322 


Q ss_pred             CCCCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEEeC
Q 029050          139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       139 ~~~~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                         ....+.++.|++|.|+|+   +++++++|+++...+.  ..+||+|||||.|||++..
T Consensus       101 ---~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~--~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          101 ---DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVAE--GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             ---CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEET--TEEEEECTTSCEEEEESSC
T ss_pred             ---ccccCCCeeEEEEECchH---HHHHHHcCCceeccCC--ceEEEECCCCCEEEEEecC
Confidence               122345789999999987   6778889999876553  3899999999999999753

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.67  E-value=7.2e-16  Score=126.39  Aligned_cols=115  Identities=17%  Similarity=0.281  Sum_probs=86.6

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCcee
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      .+.+.+++||.|.|+|++++++||+++|||++........ ......|+..++.  .+.+...+          ..++..
T Consensus       146 ~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  215 (309)
T 3hpy_A          146 GIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP----------EKGKLH  215 (309)
T ss_dssp             SSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS----------STTEEE
T ss_pred             CcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC----------CCCcee
Confidence            4568899999999999999999999999999976543222 2245678877654  34443321          124579


Q ss_pred             EEEEEECCHH---HHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          151 HTCIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       151 hi~f~v~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |++|.|+|++   +++++|+++|+++..++     .+.+.+||+|||||+|||...
T Consensus       216 Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          216 HCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            9999998765   56889999999875432     345789999999999999864

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.67  E-value=6.7e-16  Score=126.58  Aligned_cols=108  Identities=19%  Similarity=0.220  Sum_probs=84.4

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCcee
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~---~~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      |.+.+++||.|.|+|++++++||+++|||++....+.     ...|+.. ++   ..+.+....           ..+..
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   67 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-----GRVYFKCWDERDHSCYIIREAD-----------TAGID   67 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS-----------SCEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-----CeEEEEeccCCCceEEEEEeCC-----------CCcee
Confidence            4578999999999999999999999999999876431     2356665 43   234443321           13568


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEEe
Q 029050          151 HTCIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       151 hi~f~v~d---v~~~~~~l~~~G~~~~~~-----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |++|.|.+   +++++++|+++|+++...     ..+++.+||+|||||.|||++.
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAE  123 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEc
Confidence            99999986   899999999999988654     2456899999999999999974

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.67  E-value=5e-16  Score=126.22  Aligned_cols=108  Identities=13%  Similarity=0.135  Sum_probs=83.8

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      |++++||.|.|+|++++++||+++|||++....+      ..+|+..++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccCC---------CCCccEEEEEE
Confidence            6789999999999999999999999999987542      23566666543222221111         13568999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEeC
Q 029050          157 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +   |+++++++|+++|+++...+       .+.+.++|+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   89999999999999886532       4678899999999999999753

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.66  E-value=1.7e-15  Score=123.83  Aligned_cols=115  Identities=16%  Similarity=0.274  Sum_probs=84.7

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      .+.+.+++||.|.|+|++++++||+++|||++..............|+..++.  .+.+...+          ..+...|
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~g~~~h  214 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP----------EKGRLHH  214 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS----------SSSEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC----------CCCcceE
Confidence            46788999999999999999999999999999865432211122356666432  44444321          1123689


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          152 TCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       152 i~f~v~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++|.|+   |+++++++|+++|+++...+     ..++.+||+|||||.|||++.
T Consensus       215 i~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          215 VSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            999999   56778899999999885432     235789999999999999985

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.66  E-value=5.5e-16  Score=126.43  Aligned_cols=107  Identities=17%  Similarity=0.161  Sum_probs=83.2

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEee-ecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      |.+.+++||.|.|+|++++++||+++|||++.. ..+      ..+|+..++.  .+.+...+           ..+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   63 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPARLVVVPGE-----------HDRLLE   63 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSCSEEEEECS-----------SCEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcEEEEEecCC-----------CCCcce
Confidence            467899999999999999999999999999976 322      2356666553  34443311           135689


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEe
Q 029050          152 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       152 i~f~v~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++|.|+   |+++++++|+++|+++...+       .+.+.+||+|||||.|||++.
T Consensus        64 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           64 AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            999997   48899999999999986432       457899999999999999986

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.66  E-value=2.5e-15  Score=124.88  Aligned_cols=121  Identities=15%  Similarity=0.201  Sum_probs=87.2

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceEEEEEeC----CeEEEEEecCCCCCCCCCCCCCCcee
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      .+.+++||.|.|+|++++++||+++|||++........ ......++..+    +..+.+...+....   ......+..
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~---~~~~~~~~~  103 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR---TYRGTNAIT  103 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc---CcCCCCCee
Confidence            47899999999999999999999999999986542111 00111223332    34677766543221   111223568


Q ss_pred             EEEEEEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEEeC
Q 029050          151 HTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       151 hi~f~v~---dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |++|.|+   |+++++++|+++|+++...  ..|.+.+||+|||||.|||++..
T Consensus       104 hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A          104 RIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             eEEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence            9999998   7899999999999998643  24668999999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.65  E-value=1.6e-15  Score=125.37  Aligned_cols=112  Identities=17%  Similarity=0.215  Sum_probs=86.5

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      .+.+.+++|+.|.|+|++++++|| ++|||++..............|+..++.  .+.+...+           +.+.+|
T Consensus       147 ~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~-----------~~~~~H  214 (323)
T 1f1u_A          147 AGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHH  214 (323)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEE
T ss_pred             CCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC-----------CCCceE
Confidence            467889999999999999999999 9999999865443333335677776542  34444211           126789


Q ss_pred             EEEEECCHHH---HHHHHHHCCC--eEEec-----CCCceEEEEECCCCCeEEEEE
Q 029050          152 TCIAIRDVSK---LKMILDKAGI--SYTLS-----KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       152 i~f~v~dv~~---~~~~l~~~G~--~~~~~-----~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++|.|+|+++   ++++|+++|+  ++..+     .++...+||+|||||.||+.+
T Consensus       215 iaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          215 VAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence            9999999888   9999999999  88642     234578999999999999986

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.65  E-value=1.5e-15  Score=124.34  Aligned_cols=108  Identities=17%  Similarity=0.214  Sum_probs=85.2

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      |.+.+++||.|.|+|++++++||+++|||++.....  .   ..+|+..++  ..+.|...+           ..+..|+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~   65 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHHRIVLHADG-----------SDDLAYI   65 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSCSEEEECSS-----------CCEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeEEEEEEECC-----------CCCeEEE
Confidence            457899999999999999999999999999986221  1   245677766  456665321           1356899


Q ss_pred             EEEEC---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEe
Q 029050          153 CIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       153 ~f~v~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +|.|+   |+++++++|+++|+++...+       .+.+.+||+|||||.|||++.
T Consensus        66 ~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           66 GWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99997   69999999999999986532       346889999999999999875

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.65  E-value=1.9e-15  Score=127.30  Aligned_cols=110  Identities=20%  Similarity=0.230  Sum_probs=86.4

Q ss_pred             CCCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe----EEEEEecCCCCCCCCCCCCC
Q 029050           71 DKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHG  146 (200)
Q Consensus        71 ~~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~~~l~~~~~~~~~~~~~~~~  146 (200)
                      ..+...|.+++||.|.|+|++++++||+++|||++..+.+      ..+||..++.    .+.+...+           .
T Consensus         9 ~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-----------~   71 (365)
T 4ghg_A            9 VAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-----------V   71 (365)
T ss_dssp             SSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------S
T ss_pred             CCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-----------C
Confidence            4455679999999999999999999999999999987654      3466776542    23333211           1


Q ss_pred             CceeEEEEEEC---CHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEE
Q 029050          147 GRDRHTCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       147 ~~~~hi~f~v~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      .++.|++|.|.   |++++.++|+++|+++....     .+++.++|+|||||.|||+.
T Consensus        72 ~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~  130 (365)
T 4ghg_A           72 AALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFF  130 (365)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEE
Confidence            35789999997   57889999999999986542     34678999999999999985

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.65  E-value=2.4e-15  Score=124.96  Aligned_cols=115  Identities=12%  Similarity=0.163  Sum_probs=84.9

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC--Ce--EEEEEecCCCCCCCCCCCCCCce
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AE--MIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~--~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      .+.+.+++||.|.|+|++++++||+++|||++....+      ..+++..+  +.  .+..+.. ...  ...+ ..++.
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~-~~~--~~~~-~~~~~  244 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND------QEAIFQSIKGEAFGEIVVKYL-DGP--TEKP-GRGSI  244 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEESSTTCSTTCEEEEEC-CSS--BCBC-CBTCE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC------CeEEEEecCCCCceEEEEecc-CCC--CCCC-CCCce
Confidence            4668999999999999999999999999999987653      12345552  22  3333332 111  0111 12356


Q ss_pred             eEEEEEEC---CHHHHHHHHHHCCCeEEe--cCCCceEEEEECCCCCeEEEEEe
Q 029050          150 RHTCIAIR---DVSKLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       150 ~hi~f~v~---dv~~~~~~l~~~G~~~~~--~~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|++|.|+   |+++++++|+++|+++..  ...+.+.+||+|||||.|||++.
T Consensus       245 ~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  298 (338)
T 1zsw_A          245 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  298 (338)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEc
Confidence            89999998   799999999999998842  12466889999999999999975

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.64  E-value=1.8e-15  Score=123.72  Aligned_cols=109  Identities=17%  Similarity=0.141  Sum_probs=84.5

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      .|.+.+++||.|.|+|++++++||+++|||++....+  .   ...|+..++.  .+.+....           ..+..|
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~   67 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHRIVVHHNG-----------QDDLEY   67 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCSEEEESSC-----------CSEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceEEEEecCC-----------CCCeeE
Confidence            4678999999999999999999999999999986432  1   2356666432  34443211           124689


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEEe
Q 029050          152 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       152 i~f~v~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++|.|.   |+++++++|+++|+++...+       .+++.+||+|||||.|||++.
T Consensus        68 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           68 LGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            999995   78999999999999986542       346889999999999999975

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.64  E-value=3.5e-15  Score=121.64  Aligned_cols=114  Identities=12%  Similarity=0.214  Sum_probs=84.3

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC---------CCCceEEEEEeCCe--EEEEEecCCCCCCCCCC
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---------KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRP  143 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~---------~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~  143 (200)
                      ..+.+++||.|.|+|++++++||+++|||++.......         .......|+..++.  .+.+...+         
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------  208 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP---------  208 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC---------
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC---------
Confidence            34678999999999999999999999999997532111         11234567776542  45555321         


Q ss_pred             CCCCceeEEEEEECCHHH---HHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          144 EHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       144 ~~~~~~~hi~f~v~dv~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                       ...+..|++|.|+|+++   ++++|+++|+++...+     .+.+.+||+|||||.|||++.
T Consensus       209 -~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          209 -TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             -CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             -CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence             12456899999998655   5999999999886532     236789999999999999863

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.63  E-value=6.8e-15  Score=122.21  Aligned_cols=111  Identities=18%  Similarity=0.305  Sum_probs=84.8

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      ..+.||.|.|+|++++++||+++|||++.......    ..+|+..++.  .+++......      .....+..|++|.
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~----~~~~l~~g~~~~~l~l~~~~~~------~~~~~~~~hiaf~  227 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK----QRALLGYADNQCKLELQGVKGG------VDHAAAFGRIAFS  227 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT----TEEEEESSTTSCEEEEEECSSC------CCCBTTCCEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC----cEEEEEeCCceEEEEECCCCCC------CCCCCCCceEEEE
Confidence            35789999999999999999999999999866532    2467877764  4444433221      1122345799999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCeEEEEEe
Q 029050          156 IR--DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       156 v~--dv~~~~~~l~~~G~~~~~~--------~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |+  |+++++++|+++|+++...        ..+.+.+||+|||||.|||++.
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            96  8999999999999997432        2356899999999999999974

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.63  E-value=1.2e-14  Score=119.43  Aligned_cols=108  Identities=16%  Similarity=0.240  Sum_probs=85.0

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeE
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  151 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~h  151 (200)
                      ...+.+++||.|.|+|++++++||+++|||++....+.     ...|+..++.  .+.+...+            .+..|
T Consensus       136 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-----~~~fl~~~~~~~~l~l~~~~------------~g~~h  198 (310)
T 3b59_A          136 EGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGD-----FMCFLRCNSAHHRIAILPGP------------PCLNH  198 (310)
T ss_dssp             CCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEETT-----TEEEEESSSBSCSEEEEESS------------SEEEE
T ss_pred             CCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeCC-----eEEEEecCCCcceEEEECCC------------CceEE
Confidence            35688999999999999999999999999999865421     4577777543  34444311            25789


Q ss_pred             EEEEECCHHHH---HHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          152 TCIAIRDVSKL---KMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       152 i~f~v~dv~~~---~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++|.|+|++++   +++|+++|+++...+     .+.+.+||+|||||.||+.+.
T Consensus       199 i~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          199 VAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            99999997776   999999999875432     245789999999999999874

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.62  E-value=2.4e-15  Score=123.04  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=83.9

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      .+++++||.|.|+|++++++||+++|||++....+.     ..+++..++  ..+.+......         ..+..|++
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~   69 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC-----CcEEEEecCCCCceEEEEccCC---------CCCcceEE
Confidence            478999999999999999999999999999875432     125666643  23333322211         12568999


Q ss_pred             EEE---CCHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          154 IAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       154 f~v---~dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |.|   +|+++++++++++|+++...+     .+++.++|+|||||.|||++.
T Consensus        70 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999   799999999999999886543     346889999999999999974

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.62  E-value=9.5e-15  Score=120.70  Aligned_cols=109  Identities=19%  Similarity=0.222  Sum_probs=86.3

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCc
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR  148 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~---~~~~l~~~~~~~~~~~~~~~~~~  148 (200)
                      +.+.+.+++||.|.|+|++++++||+++|||++....+      ..+++.. ++   ..+.+....           ..+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~   73 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-----------IAA   73 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-----------CCC
Confidence            55789999999999999999999999999999987542      2356664 32   245444321           124


Q ss_pred             eeEEEEEE---CCHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          149 DRHTCIAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       149 ~~hi~f~v---~dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ..|++|.|   +|+++++++|+++|+++...+     .+++.++|+|||||.|||++.
T Consensus        74 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~  131 (323)
T 1f1u_A           74 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  131 (323)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEe
Confidence            68999999   689999999999999986543     346889999999999999875

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.62  E-value=1.6e-14  Score=117.47  Aligned_cols=115  Identities=15%  Similarity=0.121  Sum_probs=82.9

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ...+.|+.|.|+|++++++||+++|||++......+..  ..+++..++..+..+ .....      .......|++|.|
T Consensus       162 ~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~v  232 (282)
T 3oxh_A          162 TGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ--NYRVLKAGDAEVGGC-MEPPM------PGVPNHWHVYFAV  232 (282)
T ss_dssp             TTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEE-ECCSS------TTCCSEEEEEEEC
T ss_pred             CCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc--ceEEEEcCCccEeee-cCCCC------CCCCCeEEEEEEe
Confidence            35799999999999999999999999998864311111  224456666543322 12111      1112347899999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeCC
Q 029050          157 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       157 ~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      +|+++++++++++|+++...    +++++.++|+|||||.|||+++.+
T Consensus       233 ~dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          233 DDADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CCHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            99999999999999998543    345789999999999999999754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.61  E-value=7.3e-15  Score=120.80  Aligned_cols=108  Identities=20%  Similarity=0.290  Sum_probs=87.0

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC----eEEEEEecCCCCCCCCCCCCCCcee
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      +.+.+++|+.|.|+|++++++||+++|||++....+      ..+++..++    ..+.|...+           ..+..
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   66 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRID   66 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCee
Confidence            678899999999999999999999999999987542      346677765    456665421           13568


Q ss_pred             EEEEEE---CCHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCeEEEEEeC
Q 029050          151 HTCIAI---RDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       151 hi~f~v---~dv~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |++|.|   +|+++++++++++|+++...      ..+++.++|.|||||.|||++..
T Consensus        67 ~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           67 VIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence            999999   58999999999999987542      24678999999999999999753

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.61  E-value=7.7e-15  Score=122.20  Aligned_cols=108  Identities=13%  Similarity=0.249  Sum_probs=84.4

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-C---eEEEEEecCCCCCCCCCCCCCCce
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A---EMIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~---~~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      .+.+.+++||.|.|+|++++++||+++|||++....+      ...++... +   ..+.+...+           ..+.
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~g~   68 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-----------EAGM   68 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-----------SCEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-----------CCCc
Confidence            4678999999999999999999999999999987633      23456552 2   233333321           1357


Q ss_pred             eEEEEEECC---HHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEe
Q 029050          150 RHTCIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       150 ~hi~f~v~d---v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|++|.|+|   +++++++|+++|+++...+   .+++.++|+|||||.|||+..
T Consensus        69 ~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           69 GHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            899999996   8999999999999986543   347899999999999999853

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.59  E-value=5.3e-15  Score=121.01  Aligned_cols=113  Identities=16%  Similarity=0.135  Sum_probs=81.1

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CC-CceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCce
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      ..+.+++||.|.|+|++++++|| ++|||++.......  .. .....|+..++.  .+.+...         + ...+.
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~  210 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG---------P-MDKRI  210 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS---------C-CSSSE
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC---------C-CCCCc
Confidence            34678999999999999999999 99999986432110  11 123466766542  2333221         0 12457


Q ss_pred             eEEEEEECC---HHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          150 RHTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       150 ~hi~f~v~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|++|.|+|   +++++++|+++|+++...+     .+.+.+||+|||||.|||++.
T Consensus       211 ~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          211 NHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            899999998   6678899999999986542     235678999999999999873

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.58  E-value=2.1e-14  Score=116.60  Aligned_cols=113  Identities=17%  Similarity=0.212  Sum_probs=81.9

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CC-CceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCce
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      +.+.+++||.|.|+|++++++||+++|||++.......  .. .....|+..++  ..+.+...+.          ..+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPI----------PKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSC----------SSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCCC----------CCce
Confidence            56789999999999999999999999999987542211  00 12446777653  2344443211          2457


Q ss_pred             eEEEEEECCHHH---HHHHHHHCCCeEEecC----C-CceEEEEECCCCC-eEEEEEe
Q 029050          150 RHTCIAIRDVSK---LKMILDKAGISYTLSK----S-GRPAIFTRDPDAN-ALEFTQV  198 (200)
Q Consensus       150 ~hi~f~v~dv~~---~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdGn-~iEl~e~  198 (200)
                      .|++|.|+|+++   ++++|+ +|+++...+    . +.+.+||+||||| .|||++.
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            899999997654   678999 999875432    2 3567899999999 9999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.58  E-value=1.9e-14  Score=117.15  Aligned_cols=113  Identities=13%  Similarity=0.237  Sum_probs=82.5

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC---CCCCceEEEEEeCC--eEEEEEecCCCCCCCCCCCCCCce
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      ..+.+++|+.|.|+|++++++||+++|||++......   +.......|+..++  ..+.+...+          ...+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~----------~~~~~  207 (297)
T 1lgt_A          138 TGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFP----------LPKRI  207 (297)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCC----------CSSSE
T ss_pred             cCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcCC----------CCCCc
Confidence            3568999999999999999999999999999754211   00012446776654  245554321          12457


Q ss_pred             eEEEEEECCHHHHH---HHHHHCCCeEEecC----CC-ceEEEEECCCCCeEEEEEe
Q 029050          150 RHTCIAIRDVSKLK---MILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       150 ~hi~f~v~dv~~~~---~~l~~~G~~~~~~~----~g-~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|++|.|+|++++.   ++ +++|+++...+    .+ ..++||+|||||.|||++.
T Consensus       208 ~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          208 HHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            89999999987776   89 99999886542    22 4569999999999999874

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.57  E-value=3.8e-15  Score=124.77  Aligned_cols=126  Identities=14%  Similarity=0.223  Sum_probs=91.9

Q ss_pred             CCceeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecC--CCCCCceEEEEEeC--CeEEEEEecCCCCCCCCC----
Q 029050           73 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGR----  142 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~----  142 (200)
                      ..+.+.+++||.|.|+  |++++++||+++|||+......  .+.......|+..+  ...+.|++..........    
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~  231 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFL  231 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHH
Confidence            4567899999999999  9999999999999999985431  11222345677774  357888765432111000    


Q ss_pred             -CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecCC------Cc---------------eEEEEECCCCCeEEEEEe
Q 029050          143 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GR---------------PAIFTRDPDANALEFTQV  198 (200)
Q Consensus       143 -~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~------g~---------------~~~~~~DPdGn~iEl~e~  198 (200)
                       ...+.+++||+|.|+|+++++++|+++|+++...+.      +.               ..+|++||||++|||++.
T Consensus       232 ~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          232 KDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence             002357899999999999999999999999765431      11               379999999999999973

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.57  E-value=1.1e-14  Score=118.97  Aligned_cols=112  Identities=14%  Similarity=0.142  Sum_probs=79.0

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CC-CceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCcee
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      .+.+++||.|.|+|++++++|| ++|||++.......  .. .....|+..++.  .+.+..  .       + ..++..
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~-------~-~~~~~~  214 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGA--M-------P-AAKRLN  214 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECS--C-------C-CSSSEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEec--C-------C-CCCcee
Confidence            4568999999999999999999 99999987432111  11 123456665532  232221  1       0 124568


Q ss_pred             EEEEEECCHH---HHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          151 HTCIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       151 hi~f~v~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |++|.|+|++   +++++|+++|+++..++     .+.+.+||+|||||.|||++.
T Consensus       215 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          215 HLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            9999999766   46789999999986432     235789999999999999864

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.57  E-value=5.9e-14  Score=114.05  Aligned_cols=117  Identities=16%  Similarity=0.165  Sum_probs=83.5

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeE-EEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM-IHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      ...+.|+.|.|+|++++++||+++|||++......... ....++..++.. ..+.......     +.......+++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGG-GVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCc-cCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEEE
Confidence            34699999999999999999999999998865432110 012445566543 3344333221     1112334789999


Q ss_pred             ECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          156 IRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       156 v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+|+++++++++++|+++...+    ..++.++|+|||||.|||++..
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            9999999999999999986432    3568999999999999999864

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.55  E-value=1.3e-13  Score=103.72  Aligned_cols=117  Identities=11%  Similarity=0.055  Sum_probs=78.5

Q ss_pred             eEeEEEEEcCC--HHHHHHHHHhccCCEEeeec-------CCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCC--CC
Q 029050           79 SVHHVGILCEN--LERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEH--GG  147 (200)
Q Consensus        79 ~l~hv~l~v~D--l~~s~~FY~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~--~~  147 (200)
                      .--++.|.|+|  ++++++||+++|||++....       +........+.+..++..+.+........  .....  +.
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~--~~~~~~~~~  101 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPG--FSTAKSEGS  101 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTT--CCCCCTTSC
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccC--CccccCCCC
Confidence            34578899999  99999999999999997543       11111122344677777666654211100  00111  22


Q ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEeC
Q 029050          148 RDRHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      + .|++|.|+|+++++++|+++|++ ...+     .+++.++|+||+||.|+|++..
T Consensus       102 g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          102 G-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             C-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC--
T ss_pred             c-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEeec
Confidence            2 48999999999999999999999 5532     1268999999999999998753

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.53  E-value=5.2e-14  Score=119.11  Aligned_cols=127  Identities=13%  Similarity=0.097  Sum_probs=94.6

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC--CCCCceEEEEEeCCeEEEEEecCCCCCC----CC--CCC
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPL----SG--RPE  144 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~~~l~~~~~~~~~----~~--~~~  144 (200)
                      .+|.+.+++||.|.|+|++++++||+++|||++......  .........+..++..+.|.....+...    ..  ...
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHh
Confidence            458899999999999999999999999999999876321  1112244556778878888764222210    00  012


Q ss_pred             CCCceeEEEEEECCHHHHHHHHHHCCCeEEecC------CC-ceEEEEECCCCCeEEEEEeC
Q 029050          145 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       145 ~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++.+..|++|.|+|+++++++++++|+++...+      .| .+.+.|+||+|+.++|++..
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            356789999999999999999999999986433      12 25688999999999999863

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.52  E-value=6.3e-13  Score=107.56  Aligned_cols=109  Identities=14%  Similarity=0.078  Sum_probs=79.2

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC----eEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ...++.+.|.|++++++||+++|||++....+..   ....++..++    ..+.+...+..        .++...+++|
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  251 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP---PEFAEAALTPWSAGPRFRLAAVPGP--------GPVEPVRLHL  251 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT---EEEEEEESSSSSSSSEEEEEECCCS--------SCCCCCEEEE
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC---ccEEEEEcCCCccccccccccCCCc--------CCCCceEEEE
Confidence            4568889999999999999999999998543321   1223455655    33333221111        1122357999


Q ss_pred             EEC-CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          155 AIR-DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~-dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|+ |+++++++++++|+++...    ++|.+.++|+|||||.|||.++
T Consensus       252 ~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          252 DAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            999 9999999999999998543    2466899999999999999986

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.50  E-value=1.1e-13  Score=115.85  Aligned_cols=123  Identities=15%  Similarity=0.092  Sum_probs=90.6

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCC--CCCCCCceeEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHT  152 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~--~~~~~~~~~hi  152 (200)
                      |.+++++||.|.|+|++++++||+++|||+++........  ....+..|+..+.|.....+.....  ...++.++.|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            4688999999999999999999999999999875432211  3344567777777775322211000  01234678899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecC----CC-ceEEEEECCCCCeEEEEEeC
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|.|+|+++++++++++|+++...+    +| ...+.|+||+|..++|++..
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999999999986533    23 25788999999999999863

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.48  E-value=6.1e-13  Score=112.01  Aligned_cols=114  Identities=18%  Similarity=0.264  Sum_probs=84.7

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCcee
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      ....+.+++||.|.|+|++++.+||+. |||.+.............+|+.++..  .+.+...           ..++++
T Consensus       146 ~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~-----------~~~~lh  213 (365)
T 4ghg_A          146 SAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGG-----------NGPRLH  213 (365)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEES-----------SBSEEE
T ss_pred             ccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecC-----------CCCcee
Confidence            445678999999999999999999976 99998866554444456778887654  3333321           124689


Q ss_pred             EEEEEECCHHH---HHHHHHHCCCe--EEec--C---CCceEEEEECCCCCeEEEEEe
Q 029050          151 HTCIAIRDVSK---LKMILDKAGIS--YTLS--K---SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       151 hi~f~v~dv~~---~~~~l~~~G~~--~~~~--~---~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |++|.|+|+++   ++++|.++|+.  +.++  +   +....+||+||+||+||+...
T Consensus       214 Hvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          214 HVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             EEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence            99999997665   57789999984  3333  2   345779999999999999763

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.48  E-value=4.5e-13  Score=114.90  Aligned_cols=126  Identities=13%  Similarity=0.110  Sum_probs=93.3

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--CCCceEEEEEeCCeEEEEEecCCCCC-----------CC
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP-----------LS  140 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~g~~~~~l~~~~~~~~-----------~~  140 (200)
                      .|.+++++||.|+|+|++++++||+++|||++....+..  .......++..++..+.|.....+..           +.
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccccc
Confidence            577899999999999999999999999999998764322  11234455677888888887632210           00


Q ss_pred             -CC---------CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          141 -GR---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       141 -~~---------~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                       ..         ..++.++.|++|.|+|+++++++++++|+++...+    +......+++|+|+.++|+++.
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence             00         12456789999999999999999999999986543    2335667778888888888754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.44  E-value=9.4e-12  Score=91.75  Aligned_cols=112  Identities=14%  Similarity=0.037  Sum_probs=77.0

Q ss_pred             EEEEEcC-CHHHHHHHHHhccCCEEeeecCCC----------C--CCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCc
Q 029050           82 HVGILCE-NLERSLEFYQNILGLEINEARPHD----------K--LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR  148 (200)
Q Consensus        82 hv~l~v~-Dl~~s~~FY~~vLG~~~~~~~~~~----------~--~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~  148 (200)
                      +..|.|. |++++++||+++||+++.......          .  .....+.+..++..+.+.... +.  ...+ ...+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~--~~~~-~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PA--YPYE-GIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TT--SCCC-CCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Cc--cCCC-CCCc
Confidence            3778888 999999999999999997542110          0  112224466777766655421 11  0111 1122


Q ss_pred             eeEEEEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          149 DRHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       149 ~~hi~f~v~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                       .+++|.|+|   +++++++|+ +|.++..+    ++|.+.++|+||+|+.|+|.+..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence             589999998   789999985 78887543    35668899999999999999753

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.41  E-value=2.1e-11  Score=88.30  Aligned_cols=110  Identities=11%  Similarity=0.101  Sum_probs=76.7

Q ss_pred             EEEEcC--CHHHHHHHHHhcc-CCEEeee--cCC----CCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           83 VGILCE--NLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        83 v~l~v~--Dl~~s~~FY~~vL-G~~~~~~--~~~----~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      +.|.+.  |++++++||+++| |+++...  .+.    .......+.+..++..+.+....... .  .+ ... ...++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~-~--~~-~~~-~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRH-A--FD-FTP-AFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCC-S--CC-CCT-TEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCC-C--CC-CCC-ceEEE
Confidence            667776  9999999999999 9999752  211    11122234466777766554432111 1  11 112 24799


Q ss_pred             EEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          154 IAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       154 f~v~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      |.|+|   +++++++++ +|.++..+    ++|.+.++++||+||.|+|.++
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            99999   999999999 99988654    3567889999999999999875

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.37  E-value=2.1e-12  Score=110.55  Aligned_cols=127  Identities=13%  Similarity=0.091  Sum_probs=91.8

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC--CCceEEEEEeCCeEEEEEecCCCCC-----CCC----
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDP-----LSG----  141 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~l~~~~~~~~-----~~~----  141 (200)
                      +.+.+++++||.|.|+|++++++||+++|||++......+.  .....+.+..|+..+.|........     +..    
T Consensus        25 ~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           25 DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             ccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccc
Confidence            36788999999999999999999999999999987643221  1234556778888888886533211     000    


Q ss_pred             ------CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          142 ------RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       142 ------~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                            ...++.++.|++|.|+|+++++++++++|+++...+    ++.+...+++|+|..++|++..
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccC
Confidence                  012456789999999999999999999999885543    2234455667777777776643

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.35  E-value=3.8e-12  Score=107.64  Aligned_cols=126  Identities=13%  Similarity=0.120  Sum_probs=89.4

Q ss_pred             CCceeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecC-----CCCCCceEEEEEeC--CeEEEEEecCCCCCCCCC-
Q 029050           73 IDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGR-  142 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~-  142 (200)
                      ....+.+++||++.|+  |++++++||+++|||+.....+     .+.......++..+  ...+.|............ 
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHH
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHH
Confidence            4467899999999999  9999999999999999986532     12223344556543  346777765421111000 


Q ss_pred             ----CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecCCC---------------------ceEEEEECCCCCeEEEEE
Q 029050          143 ----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       143 ----~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g---------------------~~~~~~~DPdGn~iEl~e  197 (200)
                          ...+.+++||||.|+|+.+++++|+++|+++...+..                     ...++-+||+|++++|++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence                0134678999999999999999999999998654321                     114677899999988876


Q ss_pred             e
Q 029050          198 V  198 (200)
Q Consensus       198 ~  198 (200)
                      .
T Consensus       338 ~  338 (381)
T 1t47_A          338 K  338 (381)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.33  E-value=7.9e-12  Score=106.00  Aligned_cols=127  Identities=14%  Similarity=0.112  Sum_probs=95.5

Q ss_pred             CCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC--CceEEEEEeCCeEEEEEecCCCCC-CCC--CCCCC
Q 029050           72 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDP-LSG--RPEHG  146 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~l~~~~~~~~-~~~--~~~~~  146 (200)
                      ++.+.+++++||.|.|+|++++++||+++|||+.....+.+..  ......+..|+..+.|.....+.. ...  ...++
T Consensus         4 ~~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG   83 (393)
T 3isq_A            4 PERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHG   83 (393)
T ss_dssp             CSSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHC
T ss_pred             CCCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcC
Confidence            3467789999999999999999999999999999975442211  123456778888888887433321 111  12356


Q ss_pred             CceeEEEEEECCHHHHHHHHHHCCCeEEecC----C--C-ceEEEEECCCCCeEEEEEe
Q 029050          147 GRDRHTCIAIRDVSKLKMILDKAGISYTLSK----S--G-RPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~----~--g-~~~~~~~DPdGn~iEl~e~  198 (200)
                      .++.|++|.|+|+++++++++++|+++..++    +  | ....-+++|+|..+.|++.
T Consensus        84 ~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           84 DGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            6889999999999999999999999986543    1  2 3567789999999998874

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.33  E-value=4e-11  Score=87.58  Aligned_cols=113  Identities=8%  Similarity=0.104  Sum_probs=76.9

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhcc-CCEEeeecCCC------CCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCc
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNIL-GLEINEARPHD------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR  148 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~  148 (200)
                      .+.++....+.+.|.+++++||+++| |+++.......      ....-.+.|.+++..+.+..... .  .  +   ..
T Consensus         2 ~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~~-~--~--~---~~   73 (139)
T 1tsj_A            2 DIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANS-G--T--E---LP   73 (139)
T ss_dssp             CCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCCC-C--C--C---ce
Confidence            34556666666679999999999999 99997431111      11223344677777655543211 1  0  0   11


Q ss_pred             eeEEEEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          149 DRHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       149 ~~hi~f~v~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                       ..+++.|+|   +++++++|. +|.++..+    .+|.+..+++||+|+.|+|...
T Consensus        74 -~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 -ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             -CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             -EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence             358889886   788899998 78888643    4678999999999999999864

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.33  E-value=1.7e-12  Score=108.76  Aligned_cols=122  Identities=11%  Similarity=0.018  Sum_probs=88.6

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      ++|.+.+++||.+.|+|++++.+|| ++|||+++.+....    ....+..|+..+.+...+..........++.++.|+
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~i   80 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGM   80 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEE
Confidence            4588999999999999999999999 79999998754321    234456677666666422210000001245678999


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecCC--C-ceEEEEECCCCCeEEEEEeC
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLSKS--G-RPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~~~--g-~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +|.|+|+++++++++++|+++...+.  | .....+++|+|..++|+++.
T Consensus        81 af~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           81 AFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             EEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            99999999999999999998865442  2 24567888999888888653

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.31  E-value=9.2e-13  Score=110.43  Aligned_cols=127  Identities=13%  Similarity=0.091  Sum_probs=88.1

Q ss_pred             CCCceeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCC--CCc--eEEEEEeCCeEEEEEec-CCCCCCCC---
Q 029050           72 KIDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPY--RGAWLWVGAEMIHLMEL-PNPDPLSG---  141 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~--~~~--~~~~l~~g~~~~~l~~~-~~~~~~~~---  141 (200)
                      .....+.+++||++.|+  |++++++||+++|||+.........  .+.  ..+++..+...++|.+. ........   
T Consensus       151 ~~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~  230 (357)
T 1cjx_A          151 PVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFL  230 (357)
T ss_dssp             CCTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHH
T ss_pred             CCCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhH
Confidence            34467899999999999  9999999999999999986543111  111  22333335568888875 22211100   


Q ss_pred             CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEe-cC-------------CCc--------eEEEEEC----CCCCeEEE
Q 029050          142 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SK-------------SGR--------PAIFTRD----PDANALEF  195 (200)
Q Consensus       142 ~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~-~~-------------~g~--------~~~~~~D----PdGn~iEl  195 (200)
                      ....+.+++||||.|+|+++++++|+++|+++.. .+             .+.        ..++-+|    |+|++++|
T Consensus       231 ~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqi  310 (357)
T 1cjx_A          231 MQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQI  310 (357)
T ss_dssp             HHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEE
T ss_pred             HhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEE
Confidence            0113456899999999999999999999999865 32             111        1367788    88999998


Q ss_pred             EEe
Q 029050          196 TQV  198 (200)
Q Consensus       196 ~e~  198 (200)
                      ++.
T Consensus       311 ft~  313 (357)
T 1cjx_A          311 FSE  313 (357)
T ss_dssp             EBC
T ss_pred             ecc
Confidence            863

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.25  E-value=6.1e-10  Score=84.07  Aligned_cols=112  Identities=13%  Similarity=-0.012  Sum_probs=79.1

Q ss_pred             eEEEEEcCCHHHHHHHHHhccCCEEeeecCCC--------------CCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCC
Q 029050           81 HHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG  146 (200)
Q Consensus        81 ~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~  146 (200)
                      -...|.+.|.+++++||+++||.++.......              ....-.+.|.+++..+.+.......     +..+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~~-----~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGRA-----DKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTCC-----CCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCCC-----CCCC
Confidence            34566677999999999999999987543221              1223346678888887776643111     1122


Q ss_pred             CceeEEEEEE--------CCHHHHHHHHHHCC-CeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          147 GRDRHTCIAI--------RDVSKLKMILDKAG-ISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       147 ~~~~hi~f~v--------~dv~~~~~~l~~~G-~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .+ ..+++.+        +|+++++++|.++| +++...    .+|.+..+++||+|+.|+|...
T Consensus       102 ~~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          102 NG-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             SS-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEE
T ss_pred             Cc-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            22 4567777        57899999999999 677543    4677899999999999999854

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.17  E-value=3.2e-09  Score=77.31  Aligned_cols=110  Identities=9%  Similarity=0.049  Sum_probs=76.3

Q ss_pred             EEEEcC-CHHHHHHHHHhccC-CEEeee--cC----CCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           83 VGILCE-NLERSLEFYQNILG-LEINEA--RP----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        83 v~l~v~-Dl~~s~~FY~~vLG-~~~~~~--~~----~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ..|.+. |.+++++||+++|| .++...  .+    ......-.+.|.+++..+.+.........    ..+.+ ..+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~~----~~~~~-~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNF----TFTPA-MSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCSC----CCCTT-SCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCCC----CCCCC-EEEEE
Confidence            445566 89999999999999 676532  11    12223345668888888777653322111    11122 46999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          155 AIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .|+|   +++++++|. +|.++...    .+|.+..+++||+|+.|.|...
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence            9999   999999995 57777543    4667899999999999999753

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.16  E-value=9e-11  Score=100.58  Aligned_cols=105  Identities=16%  Similarity=0.193  Sum_probs=75.9

Q ss_pred             CCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----CCceEEEEEeC--CeEEEEEecCC---CCCCCC
Q 029050           72 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPN---PDPLSG  141 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g--~~~~~l~~~~~---~~~~~~  141 (200)
                      .....+.+++||++.|+|++++++||+++|||+..+......     .+....|+..+  ...+.|.+...   ......
T Consensus       195 ~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~  274 (424)
T 1sqd_A          195 PLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQ  274 (424)
T ss_dssp             CCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHH
T ss_pred             CCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhh
Confidence            345678899999999999999999999999999987653221     23345566654  45777777542   111000


Q ss_pred             C---CCCCCceeEEEEEECCHHHHHHHHHH----CCCeEEec
Q 029050          142 R---PEHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  176 (200)
Q Consensus       142 ~---~~~~~~~~hi~f~v~dv~~~~~~l~~----~G~~~~~~  176 (200)
                      .   ...+.+++||||.|+|+.+++++|++    +|+++...
T Consensus       275 ~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  316 (424)
T 1sqd_A          275 TYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPS  316 (424)
T ss_dssp             HHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCC
T ss_pred             hhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecC
Confidence            0   02456899999999999999999999    89998654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.14  E-value=3.1e-10  Score=97.04  Aligned_cols=105  Identities=15%  Similarity=0.165  Sum_probs=75.9

Q ss_pred             CCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----CCceEEEEEeC--CeEEEEEecCCC-CCCCCC-
Q 029050           72 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNP-DPLSGR-  142 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g--~~~~~l~~~~~~-~~~~~~-  142 (200)
                      .....+.+++||++.|+|++++++||+++|||+..+......     .+....|+..+  ...+.+.+.... ...... 
T Consensus       192 ~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~  271 (418)
T 1sp8_A          192 AADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQ  271 (418)
T ss_dssp             CCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHH
T ss_pred             CCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchh
Confidence            345668899999999999999999999999999987653211     23355677654  357777765421 110000 


Q ss_pred             ----CCCCCceeEEEEEECCHHHHHHHHHH----CCCeEEec
Q 029050          143 ----PEHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  176 (200)
Q Consensus       143 ----~~~~~~~~hi~f~v~dv~~~~~~l~~----~G~~~~~~  176 (200)
                          ...+.+++||+|.|+|+.+++++|++    +|+++...
T Consensus       272 ~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  313 (418)
T 1sp8_A          272 TFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAP  313 (418)
T ss_dssp             HHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCC
T ss_pred             hhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccC
Confidence                01356899999999999999999999    79998654

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.13  E-value=9.5e-10  Score=86.60  Aligned_cols=108  Identities=15%  Similarity=0.081  Sum_probs=76.2

Q ss_pred             EeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeEE---EE
Q 029050           80 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT---CI  154 (200)
Q Consensus        80 l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi---~f  154 (200)
                      .-++.|+|.|.+++++||+++|||++..+..      ..++|..++.  .+.+-+.+....     ....|..|+   ++
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~-----~~~~Glkh~a~i~i   79 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT-----RKVEGRKKLARLIV   79 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC-----BCCCSSCSEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc-----ccccccceeeeEEE
Confidence            5568899999999999999999999988765      4456665443  444445443321     122455667   59


Q ss_pred             EECCHHHHHHHHHHCCCeEE--ecCCCceEEEEECCCCCeEEEEEeC
Q 029050          155 AIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       155 ~v~dv~~~~~~l~~~G~~~~--~~~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .+++-+++.+.|.. +..+.  ...+.++++|+.||+||.|||...+
T Consensus        80 ~vp~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           80 KVENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             EESSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECCS
T ss_pred             EcCCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEcC
Confidence            99988877766654 55543  3344566899999999999998643

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.06  E-value=4.3e-10  Score=95.32  Aligned_cols=103  Identities=12%  Similarity=0.047  Sum_probs=74.5

Q ss_pred             CCceeceEeEEEEEcCC--HHHHHHHHHhccCCEEeeecCC-----CCCCceEEEEEeC--CeEEEEEecCCCCCCCCC-
Q 029050           73 IDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWVG--AEMIHLMELPNPDPLSGR-  142 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~D--l~~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~-  142 (200)
                      +...+.+++||++.|+|  ++++++||+++|||+..+..+.     +..+.+...+..+  ...+.|.+.......... 
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHH
Confidence            45678999999999998  9999999999999999875431     1122233445443  358888875431111100 


Q ss_pred             ----CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEe
Q 029050          143 ----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  175 (200)
Q Consensus       143 ----~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~  175 (200)
                          ...+.|++||||.|+|+.+++++|+++|+++..
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~  283 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLS  283 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCC
Confidence                113667999999999999999999999998844

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.30  E-value=2.5e-05  Score=58.16  Aligned_cols=102  Identities=12%  Similarity=0.019  Sum_probs=70.4

Q ss_pred             EEEEcC-CHHHHHHHHHhcc-CCEEeee--cCC-----CCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           83 VGILCE-NLERSLEFYQNIL-GLEINEA--RPH-----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        83 v~l~v~-Dl~~s~~FY~~vL-G~~~~~~--~~~-----~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      ..|.+. |.+++++||+++| |.++...  .+.     +....-.+.|.+++..+.+..... .    .+ ...+ ..++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p-~----~~-~~~~-~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP-A----FR-HSEA-FSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT-T----CC-CCTT-EEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCC-C----cC-CCCc-eEEE
Confidence            345555 9999999999999 9998742  211     122334466888888777765311 1    11 1122 4688


Q ss_pred             EEECC---HHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          154 IAIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~d---v~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +.|+|   +++++++|.+.|.++.      +...++||.|+.|.|..
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~~G~v~D~fGv~W~i~~  122 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------ACGWCRDKWGISWQITP  122 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------STTEEECTTSCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------EEEEEECCCCCEEEEEe
Confidence            88887   6777999988888876      23489999999999875

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.12  E-value=6.7e-06  Score=75.73  Aligned_cols=120  Identities=19%  Similarity=0.235  Sum_probs=76.6

Q ss_pred             eceEeEEEEEc---CCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCC--eEEEEEecCCCCC-----------CC
Q 029050           77 VVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDP-----------LS  140 (200)
Q Consensus        77 i~~l~hv~l~v---~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~--~~~~l~~~~~~~~-----------~~  140 (200)
                      +.+...+.+..   .-++++++||+++|++.......   .....++|...+  ..+.+...+....           ..
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (941)
T 3opy_B            7 FNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSN---QKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLT   83 (941)
T ss_dssp             SCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCS---CCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC
T ss_pred             ecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccC---CcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhh
Confidence            45666666664   67899999999999998765322   111233443332  3555543311100           00


Q ss_pred             --CCCCCC-CceeEEEEEECCHHHHHHHHHHCCCeEEecCC--CceEEEEECCCCCeEEEEEeC
Q 029050          141 --GRPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       141 --~~~~~~-~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~--g~~~~~~~DPdGn~iEl~e~~  199 (200)
                        .....+ +...|+.|.+.|++++.+.|.+.+.+++..+.  +...+|+.||+||+|+|.+..
T Consensus        84 ~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           84 RSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             ----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             cccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence              001111 23359999999999999999999999988776  778999999999999998643

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.01  E-value=7.5e-06  Score=66.02  Aligned_cols=91  Identities=12%  Similarity=0.228  Sum_probs=66.7

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccC-----CEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCC----------C--
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD----------P--  138 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG-----~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~----------~--  138 (200)
                      ++.+++|+.+.|.+++        .||     |.+.........+.....+.+++..++|+...+..          +  
T Consensus        21 M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~   92 (274)
T 3p8a_A           21 MILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGV   92 (274)
T ss_dssp             CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGT
T ss_pred             ccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCccc
Confidence            4678999999999874        467     87765433334556666666688899999876531          1  


Q ss_pred             CCCC----CCCCCceeEEEEEECCHHHHHHHHHHCCCeEE
Q 029050          139 LSGR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  174 (200)
Q Consensus       139 ~~~~----~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~  174 (200)
                      ....    ...+.++.++++.++|+++..+++.++|+.+.
T Consensus        93 ~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~  132 (274)
T 3p8a_A           93 AFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVV  132 (274)
T ss_dssp             CTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEE
T ss_pred             hHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcC
Confidence            0100    23456899999999999999999999999774

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.78  E-value=0.0013  Score=51.71  Aligned_cols=90  Identities=10%  Similarity=0.100  Sum_probs=61.2

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC-
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  157 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~-  157 (200)
                      .+ ||.|.|.|.+++  ||++ +|+                     +..+.|++..+.+-+.. +...-++.++-|.++ 
T Consensus       152 ti-~I~LnV~d~~~s--Fy~~-~~~---------------------~~~~~F~~a~G~dl~~~-~~~t~gLe~l~~~v~~  205 (244)
T 3e0r_A          152 EI-SMELHLPTDIES--FLES-SEI---------------------GASLDFIPAQGQDLTVD-NTVTWDLSMLKFLVNE  205 (244)
T ss_dssp             EE-EEEEEECTTCCC--SCCH-HHH---------------------TTTEEEEECCCTTTTCC-TTSBSSEEEEEEEESS
T ss_pred             EE-EEEEEcCchHHH--Hhhc-cCC---------------------cccEEEEcccCCCCCCC-CCCccCceEEEEEeCH
Confidence            46 999999999998  9986 433                     11134444343332222 223335678888886 


Q ss_pred             -CHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          158 -DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       158 -dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                       |+.++.++|+++|.-+...   ...+.+.||.|+.|=|.+
T Consensus       206 ~dl~~l~~~L~~~g~~idkk---~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          206 LDIASLRQKFESTEYFIPKS---EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CCHHHHHHHTTTSCEECCTT---CCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHHhCCceEccc---CCEEEEECCCCCEEEEEE
Confidence             7889999999988743322   347899999999998875

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.26  E-value=0.019  Score=45.36  Aligned_cols=35  Identities=11%  Similarity=0.174  Sum_probs=31.3

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeec
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEAR  109 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~  109 (200)
                      ...+.+++||.|.|+|++++.+|| ++|||+...+.
T Consensus       153 ~~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          153 ADQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             GGGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             HHHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            356889999999999999999999 99999998653

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=91.91  E-value=1.6  Score=40.68  Aligned_cols=48  Identities=25%  Similarity=0.279  Sum_probs=35.4

Q ss_pred             eEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          150 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       150 ~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ..+.|.+.|+.++.+.|.+..++.....-....+|..||=||.|-|..
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~  172 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSS  172 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeec
Confidence            468999999999999999873333222223456999999999998753

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=91.53  E-value=0.21  Score=35.75  Aligned_cols=60  Identities=15%  Similarity=0.232  Sum_probs=42.8

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC-CCCCceEEEE---EeCCeEEEEEecCCCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWL---WVGAEMIHLMELPNPDP  138 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~l---~~g~~~~~l~~~~~~~~  138 (200)
                      .++.|+.+.|.|++++.+...+ .|.++....+. ...+...+|+   ..++..++|++......
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~  141 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAE  141 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCccc
Confidence            5799999999999999999987 89888654221 1122345666   33567899998776543

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=91.37  E-value=0.67  Score=31.01  Aligned_cols=52  Identities=15%  Similarity=0.158  Sum_probs=39.8

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .+.|+++.|.|++++.+...+ .|.+....    ..+...+++..++|..++|.+..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            467999999999999988854 68887543    23446677777789999998754

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=91.28  E-value=0.72  Score=31.76  Aligned_cols=52  Identities=12%  Similarity=0.040  Sum_probs=40.1

Q ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEEecC----CCceEEEEECCCC-----CeEEEEEe
Q 029050          147 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----SGRPAIFTRDPDA-----NALEFTQV  198 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~----~g~~~~~~~DPdG-----n~iEl~e~  198 (200)
                      .++.|+.+.|.|++++.+...+ .|.+.....    .+...+++..+++     ..|+|++.
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            3578999999999999998874 799875432    2445677887775     78999875

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=91.22  E-value=0.97  Score=29.66  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=38.1

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++.|+.+.|.|++++.+...+ .|.+...... ....++..++|..+++.+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-CcEEEEEcCCCcEEEEEeC
Confidence            468999999999999988876 7998865432 2346677777888888764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=91.10  E-value=0.8  Score=31.04  Aligned_cols=51  Identities=12%  Similarity=0.147  Sum_probs=38.2

Q ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEEec----C-CCceEEEEECCCCCeEEEEEeC
Q 029050          148 RDRHTCIAIRDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++.|+++.|+|++++.+.....|.+....    + .+.+..++.. +|..+|+.++.
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            57899999999999999888889887432    1 2335555555 67889998753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=91.09  E-value=0.56  Score=32.54  Aligned_cols=51  Identities=12%  Similarity=0.251  Sum_probs=38.6

Q ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEEecC---------------CCceEEEEECCCC-CeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~---------------~g~~~~~~~DPdG-n~iEl~e~  198 (200)
                      ++.|+.+.|.|++++.+...+.|.+.....               .+...+++.-++| ..|||++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            568999999999999888877899875321               2335677777776 78998874

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=90.85  E-value=1  Score=30.17  Aligned_cols=50  Identities=20%  Similarity=0.324  Sum_probs=37.2

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++.|+++.|.|++++.+...+ .|.+....    ..+...+++.. ++..+|+.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEec
Confidence            468999999999999999988 79987543    12334455554 5778888864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=90.66  E-value=1.6  Score=30.10  Aligned_cols=58  Identities=14%  Similarity=0.205  Sum_probs=38.1

Q ss_pred             eeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCC
Q 029050           76 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN  135 (200)
Q Consensus        76 ~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~  135 (200)
                      ...++.|+.+.|.  |++++.+...+ .|.++.........+ ...|+.- ++..++|+..+.
T Consensus        93 ~~~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           93 TFTRAYHLAFDIDPQLFDRAVTVIGE-NKIAIAHGPVTRPTG-RGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCSSCCEEEEECCGGGHHHHHHHHHH-TTCCEEEEEEEC-CC-EEEEEECTTSCEEEEEECCC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHHHH-CCCccccCceecCCc-cEEEEECCCCCEEEEEecCC
Confidence            3457899999998  99999999988 798886432111222 3444443 355778776543

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=89.44  E-value=1.4  Score=30.47  Aligned_cols=52  Identities=13%  Similarity=0.124  Sum_probs=37.8

Q ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEE-CCCCCeEEEEEe
Q 029050          147 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFTQV  198 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~-DPdGn~iEl~e~  198 (200)
                      .++.|+.+.|.|++++.+...+ .|.+......+....++. +.++..+++.+.
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            4578999999999999999966 799887654333334443 445778888764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=89.32  E-value=0.75  Score=32.48  Aligned_cols=53  Identities=21%  Similarity=0.337  Sum_probs=38.2

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC---CeEEEEEec
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMEL  133 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g---~~~~~l~~~  133 (200)
                      .+++|+++.|.|++++.+...+ .|.++....+..  +.+.+|+.-.   +..++|++.
T Consensus       103 ~g~~Hiaf~v~di~~~~~~l~~-~G~~~~~~~~~~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A          103 EGIHHIAFVVKDMDRKVEELYR-KGMKVIQKGDFE--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCEEEEEEET--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCcEeeccccC--CeeEEEEeccccCcEEEEEEec
Confidence            4799999999999999999988 799887553321  2344555432   557887764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=89.16  E-value=1.1  Score=29.89  Aligned_cols=55  Identities=20%  Similarity=0.282  Sum_probs=35.9

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLM  131 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~  131 (200)
                      .-.++.|+.+.|.|++++.+...+ .|.++.........+.+..++.-. +..++|+
T Consensus        78 ~~~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  133 (134)
T 3l7t_A           78 EACGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELH  133 (134)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEE
T ss_pred             CCCCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEe
Confidence            345899999999999999999987 788876432222223344444433 3455554

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=89.07  E-value=1.4  Score=35.03  Aligned_cols=51  Identities=14%  Similarity=0.111  Sum_probs=38.3

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM  131 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~  131 (200)
                      -++.+|.+|.|.+.|++++++.|.++||+......+      ...-+.+++..+.+.
T Consensus       186 nGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~~------~~~~l~l~~~~i~f~  236 (274)
T 3p8a_A          186 QKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEND------HYTDLILKNDDIYFR  236 (274)
T ss_dssp             CTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEECS------SEEEEECTTCCCEEE
T ss_pred             CccceEEEEEEEeCCHHHHHHHHHHHhCCCccccCC------ceEEEecCCcEEEEE
Confidence            457799999999999999999999999999975443      112245565555554

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=88.11  E-value=1.3  Score=30.44  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=36.3

Q ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          148 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++.|+.+.|.|++++.+...+.|.++....+....+.+.-++|..+++.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            46899999999999988888789887654322223445546778888875

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=87.03  E-value=3.7  Score=27.46  Aligned_cols=58  Identities=16%  Similarity=0.079  Sum_probs=37.5

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC-ceEEEEEe-CCeEEEEEecCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWV-GAEMIHLMELPNP  136 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~-g~~~~~l~~~~~~  136 (200)
                      .++.|+.+.|.|++++.+...+ .|.++.........+ ....++.- ++..++|++....
T Consensus        70 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           70 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             SSEEEEEEECSCHHHHHHHHHH-TTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            3678999999999999999887 898887532111122 23344443 4568888875543

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=86.23  E-value=1.8  Score=28.53  Aligned_cols=50  Identities=12%  Similarity=0.022  Sum_probs=36.2

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEec---C-CCceEEEEECCCCCeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~---~-~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++.|+.+.|.|++++.+...+ .|.++...   . .+...+++.-+++ .++|.+.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEec
Confidence            468999999999999999976 89987543   1 2333455665666 8888763

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=86.14  E-value=3.1  Score=28.87  Aligned_cols=47  Identities=21%  Similarity=0.219  Sum_probs=34.0

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++.|+.+.|.|++++.+...+ .|.++....++.  .++.- +|..+++.+
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~--~~l~~-~~~~l~l~~   70 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR--KALIF-GAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEETTTE--EEEEE-TTEEEEEEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCCe--EEEEe-CCeEEEEec
Confidence            578999999999999999988 899987654332  23322 345666665

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=85.81  E-value=2.6  Score=28.64  Aligned_cols=50  Identities=10%  Similarity=0.004  Sum_probs=35.3

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEecCCC---ceEEEEECCCCCeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSG---RPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g---~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++.|+.+.|.|++++.+...+ .|.++.....+   .....+.. +|..++|.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   58 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeC
Confidence            468999999999999888866 69988653221   12222234 7888999875

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=84.97  E-value=2.4  Score=30.60  Aligned_cols=55  Identities=15%  Similarity=0.253  Sum_probs=38.6

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP  134 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~  134 (200)
                      .+++|+.|.|.|++++.+-.++ .|.++.......... ..+|+.- ++..++|++..
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMK-GLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSST-TCEEEECTTCCEEEEECGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCccCCcc-eEEEEECCCCCEEEEEEcc
Confidence            5889999999999999999987 799987643222221 2344543 45688888743

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=84.47  E-value=5  Score=27.46  Aligned_cols=52  Identities=19%  Similarity=0.173  Sum_probs=38.2

Q ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEEecC---C-CceEEEEECCC---CCeEEEEEe
Q 029050          147 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S-GRPAIFTRDPD---ANALEFTQV  198 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~---~-g~~~~~~~DPd---Gn~iEl~e~  198 (200)
                      .++.|+.+.|.|++++.+...+ .|.+.....   . +...+++.-++   +..++|.+.
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            3578999999999999998875 799885432   2 22446666654   588999875

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=84.20  E-value=1.7  Score=29.58  Aligned_cols=50  Identities=8%  Similarity=0.045  Sum_probs=33.6

Q ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEE
Q 029050          148 RDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~G~~~~~~-~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      .+.|+.+.|.|++++.+-..+.|.++... ...+..+++...+|..++|..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            46899999999999988887788887655 221133444434666777654

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=83.78  E-value=4.2  Score=27.00  Aligned_cols=48  Identities=15%  Similarity=0.210  Sum_probs=33.6

Q ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          147 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      .++.|+.+.|.|++++.+...+ .|.++.....+  .+++.- +|..+++.+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~-~~~~~~l~~   57 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG--RIALEF-GHQKINLHQ   57 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTT--EEEEEE-TTEEEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecCC--eEEEEc-CCEEEEEEc
Confidence            4678999999999999998887 79988765433  222322 355666654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=82.99  E-value=4.1  Score=29.36  Aligned_cols=55  Identities=15%  Similarity=0.244  Sum_probs=37.4

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP  134 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~  134 (200)
                      .++.|+.|.|.|++++.+...+ .|.++......... ....|+.- ++..++|++..
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~~~~~-~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKM-KGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSS-TTCEEEECTTCCEEEEECTT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCcCCCc-eeEEEEECCCCCEEEEEecC
Confidence            4788999999999999999988 79988753221111 12344543 45577777643

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=82.75  E-value=5.6  Score=26.34  Aligned_cols=54  Identities=9%  Similarity=0.223  Sum_probs=35.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEe
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLME  132 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~  132 (200)
                      .+..|+.+.|.|++++.+-..+ .|.++.........+....++.-. +..++|++
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            4679999999999999999988 799987422211222233444433 44555553

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=81.54  E-value=5.6  Score=27.55  Aligned_cols=49  Identities=18%  Similarity=0.152  Sum_probs=35.5

Q ss_pred             CceeEEEEEECCHHHHHHHH----HHCCCeEEecCCCceEEEEECCCCCeEEEEEe
Q 029050          147 GRDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l----~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .++.|+.+.|.|++++.+..    ...|.+......++. .|+.  +|..++|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~-~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGK-SYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEE-EEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCc-eEec--CCeEEEEEEc
Confidence            35789999999999998877    458998866543332 3454  5677888764

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=81.03  E-value=2.4  Score=29.78  Aligned_cols=55  Identities=15%  Similarity=0.180  Sum_probs=36.8

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCC
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN  135 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~  135 (200)
                      ++.|+.+.|.|++++.+-..+ .|.++.........+ +.+++.- ++..++|++...
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g-~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPV-VTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSC-EEEEEECSSSCEEEEEEC--
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCe-EEEEEECCCCCEEEEEEECC
Confidence            567899999999999999887 888876533222222 4455543 355888887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	200
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-15
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	3e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	7e-13
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-11
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	6e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	8e-11
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-10
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	4e-10
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	7e-10
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-08
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	2e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-08
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-08
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	5e-08
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	7e-08
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	2e-07
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	3e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	3e-07
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	8e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	9e-07
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	4e-06
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	4e-06
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-05
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-05
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	4e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	9e-05
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	4e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	0.002

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 67.3 bits (163), Expect = 4e-15
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 75  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLM 131
           Y +   HH+ ++ +N   +  FY+N+LGL   +   +   P      +    G+    L 
Sbjct: 2   YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS 61

Query: 132 ELPNPDPLSGRPEHGGRDR--HTCIAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRD 187
               P             R      +   +   K   +K  + ++   + + RPA+   D
Sbjct: 62  FFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED 121

Query: 188 PDANALEFTQVDG 200
            +   L     +G
Sbjct: 122 AEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 65.1 bits (157), Expect = 3e-14
 Identities = 26/118 (22%), Positives = 44/118 (37%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           + H  I   +L+RS++FY   LG+++       +  Y   +L  G EM   +     +  
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 140 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 197
               +H     H  I + DV +L   + K  +            F  DPD   +E   
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 60.8 bits (146), Expect = 7e-13
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 140
            H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 141 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEF 195
            + E G    H  +++ + ++    + + G + T              F  DPD   +E 
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 196 TQ 197
            +
Sbjct: 124 IE 125

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 59.6 bits (143), Expect = 2e-12
 Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 11/122 (9%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPD 137
            + H+  +  +LER     + +       A         R  +  +G   + +M+     
Sbjct: 4   GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA 63

Query: 138 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 193
                           I   D  +    + K G+     +        +I+  D D +  
Sbjct: 64  E------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMF 117

Query: 194 EF 195
           E 
Sbjct: 118 EL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.2 bits (137), Expect = 2e-11
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
            ++H+ +   +L  S+ FY+++LG  +           +GA+L +G+  + L   P    
Sbjct: 4   GLNHLTLAVADLPASIAFYRDLLGFRLEAR------WDQGAYLELGSLWLCLSREPQYGG 57

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 195
               P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 58  ----PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (135), Expect = 6e-11
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 81  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------- 126
               +  ++ ++SL+FY  +LG+ + +      + +   +L    +              
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 127 -----MIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-- 174
                 + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 175 -LSKSGRPAIFTRDPDANALEFTQ 197
                 +   F +DPD   +E   
Sbjct: 145 PDDGKMKGLAFIQDPDGYWIEILN 168

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 55.4 bits (132), Expect = 8e-11
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
           S++H+ +   +L++S+ F+  +LGL ++           G      +       +P    
Sbjct: 4   SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVP---- 59

Query: 139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF 195
                E         +A  D   L   L++AG++     KS   + +  DPD + LE 
Sbjct: 60  ---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 54.9 bits (131), Expect = 2e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 2   AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 61

Query: 136 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF 195
           P+           +    +                       +    I+  DP  N  E 
Sbjct: 62  PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEV 121

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 54.4 bits (130), Expect = 4e-10
 Identities = 12/127 (9%), Positives = 31/127 (24%), Gaps = 9/127 (7%)

Query: 74  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 133
            + +  +  V +    L++       I G          +      +  +  E    + +
Sbjct: 7   KHQIQGMGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVV 61

Query: 134 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----GRPAIFTRDPD 189
              D  + +P  G           D              +  S         +++ R+ +
Sbjct: 62  KYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESN 121

Query: 190 ANALEFT 196
               E  
Sbjct: 122 GILFEIA 128

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 53.7 bits (128), Expect = 7e-10
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 2/120 (1%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +V + H   +  ++ R   + +  LG  ++E           AW+     +         
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-PAIFTRDPDANALEF 195
            P          ++H  I I D      I D+               ++  DPD + +E 
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 51.1 bits (121), Expect = 2e-09
 Identities = 11/116 (9%), Positives = 27/116 (23%), Gaps = 9/116 (7%)

Query: 85  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 144
           +   ++  ++EF+ + LG                A +      + +  + +         
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQA 63

Query: 145 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ 197
                    +       +      A          +        RDP  N + F  
Sbjct: 64  WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 49.0 bits (115), Expect = 1e-08
 Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 10/118 (8%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           + H+ +   ++  + EF +   GL  +  R +     R    ++   M            
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEV------- 56

Query: 140 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-AIFTRDPDANALEFT 196
             +            +   V K+   L + G      K       +   P    +E  
Sbjct: 57  --QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM 112

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 49.2 bits (116), Expect = 2e-08
 Identities = 17/138 (12%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW---------VGAEM 127
            + + HV   C + + + ++YQ   G        + +       +             ++
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 128 IHLMELPNPDPLSGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRP 181
           +  +   +         +G     H    + D+  +   L + G+        L   G  
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 182 AIF--TRDPDANALEFTQ 197
             F   +      +E TQ
Sbjct: 125 INFMHPKSGKGVLIELTQ 142

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 48.3 bits (114), Expect = 2e-08
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 79  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 138
           +++ + I+  N+ +     ++IL  + + A           +      ++       P  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDG-----FAQFTIGSHCLMLSQNHLVP-- 54

Query: 139 LSGRPEHGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 194
                E+        I + DV     +L  +  K     T++  G  ++  + P    L+
Sbjct: 55  ----LENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLD 110

Query: 195 FTQV 198
           F ++
Sbjct: 111 FYRM 114

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 48.1 bits (113), Expect = 5e-08
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
           GV+   HV +   ++ ++LE Y  +LGL        D+      +L    E+     +  
Sbjct: 4   GVMRPGHVQLRVLDMSKALEHYVELLGLI-----EMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 136 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDA 190
                G    G +        +    L       G +     +G        +  + P  
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLM----AYGCAVEQLPAGELNSCGRRVRFQAPSG 114

Query: 191 NALEF 195
           +  E 
Sbjct: 115 HHFEL 119

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 48.1 bits (113), Expect = 5e-08
 Identities = 15/140 (10%), Positives = 39/140 (27%), Gaps = 19/140 (13%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINE------------ARPHDKLPYRGAWLWVG 124
           ++ + +V I+ E+L+ ++ F++ I                         +         G
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 125 AEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISY----TLSK 177
              I L     P  ++                  + D+ ++   L K G          +
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 178 SGRPAIFTRDPDANALEFTQ 197
           +     + R  +   +   +
Sbjct: 127 NSYRLCYIRGVEGILIGLAE 146

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.6 bits (112), Expect = 7e-08
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 9/125 (7%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 141
            +      L+  + FY+  L L+                +  G                 
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIG---EFSQHNGYDGVMFGLPHADYHLEFTQYEGGS 68

Query: 142 RPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEF 195
                  D      + +  +L  I   L   G     S++       +   DPD   + F
Sbjct: 69  TAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVF 128

Query: 196 TQVDG 200
               G
Sbjct: 129 MNSKG 133

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 46.3 bits (108), Expect = 2e-07
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 7/124 (5%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           +    ++ E++ +S+EFY+  +G+EI                 +      +  + + DP 
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 140 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANAL 193
              P  G R           S  K   +     Y           G+     +DPD N +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 194 EFTQ 197
           +   
Sbjct: 122 DLFA 125

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 45.7 bits (107), Expect = 3e-07
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           + S+ ++G    ++     F    LGL       +      G    + +    +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQQGE 55

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 189
                     G   +       ++++   L +AGI+ T   +           I   DP 
Sbjct: 56  VD---DLAFAG---YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 190 ANALEF 195
              LE 
Sbjct: 110 GLPLEI 115

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 3e-07
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 76  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 135
             +  H V     N +++  FY N +G E    +  +          +    I  +    
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 136 PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGI 171
            +P +        +HG   +     + D   +     + G 
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGA 108

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 44.6 bits (104), Expect = 8e-07
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +V   ++ I+  +L +S EFY ++LGL + E   +               ++    +   
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDAN 191
                         +   +  +V   +    + G      K G       ++   DP   
Sbjct: 74  ----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 192 ALEF 195
             EF
Sbjct: 124 PYEF 127

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 45.5 bits (107), Expect = 9e-07
 Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 13/112 (11%)

Query: 73  IDYGVVSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWVGA 125
            DYG+    H+      L  +  ++    G          +       L           
Sbjct: 3   ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSEN 62

Query: 126 EMIHLMELPNPDPLSGRPE------HGGRDRHTCIAIRDVSKLKMILDKAGI 171
            ++ L E  +      + +       G   +H  +A  DV +    +     
Sbjct: 63  VLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSA 114

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 42.9 bits (100), Expect = 4e-06
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 8/105 (7%)

Query: 75  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLME 132
           + V  +  V     N +++  +Y    G+++      +      A   +  G+    L  
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 133 LPNPDPLSGRP------EHGGRDRHTCIAIRDVSKLKMILDKAGI 171
           +  P    G        EHG       I + D         + G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 42.8 bits (100), Expect = 4e-06
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 80  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 139
           + H      +  +++ FY  +LG  +++       P            +H     +   L
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAH----FLHCNGRHHTIAL 66

Query: 140 SGRPEHGGRDRHT--CIAIRDVSKLKMILDKAGI-SYTLSKSGRP---AIFTRDPDAN-A 192
           +  P              I DV      LD AG  +  L +       + +   P     
Sbjct: 67  AAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIE 126

Query: 193 LEFT 196
           +EF 
Sbjct: 127 VEFG 130

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 40.7 bits (94), Expect = 1e-05
 Identities = 17/129 (13%), Positives = 37/129 (28%), Gaps = 25/129 (19%)

Query: 77  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 136
           +  + ++G   +++     F    +GL               A          +   P  
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQPGE 55

Query: 137 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-------AIFTR 186
                         +  + + D + L+ + DK   AG+++T               +  +
Sbjct: 56  LD---------DLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQ 106

Query: 187 DPDANALEF 195
           DP    LE 
Sbjct: 107 DPFGLPLEI 115

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 40.0 bits (92), Expect = 2e-05
 Identities = 17/118 (14%), Positives = 29/118 (24%), Gaps = 16/118 (13%)

Query: 82  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 141
              I      R+  FY +ILG+                      E    +          
Sbjct: 5   VANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQVSFAREGG--- 55

Query: 142 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 195
               G       I + +  ++   + KAG+               +F RDP    +  
Sbjct: 56  ---SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 40.6 bits (94), Expect = 3e-05
 Identities = 8/57 (14%), Positives = 20/57 (35%)

Query: 75  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 131
           +  ++ HHV + C +   +   +   LG  +             A L + +  +  +
Sbjct: 9   FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFL 65

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 39.3 bits (90), Expect = 4e-05
 Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 9/115 (7%)

Query: 85  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 144
           +   ++  ++ F+ + LG E +              +  G   +H+    +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA------GVRRGDIRLHISRTEHQIVADNTSA 64

Query: 145 HGGRDRHTCIAIRDVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT 196
                    +       +                          RDP  N + FT
Sbjct: 65  WIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFT 119

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 38.4 bits (88), Expect = 9e-05
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 3/115 (2%)

Query: 85  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 144
           +   + + +  FY+  LG  I                 +     H    P     S    
Sbjct: 8   LPSRDFDSTAAFYER-LGFGI--VFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLR 64

Query: 145 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 199
                           +          +  L   G       DPD   L   Q +
Sbjct: 65  LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE 119

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 75  YGVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMEL 133
           + V   HH+   C +       +   LG+    ++          ++L    ++  L   
Sbjct: 8   FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA 67

Query: 134 PN 135
           P 
Sbjct: 68  PY 69

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 15/128 (11%), Positives = 35/128 (27%), Gaps = 17/128 (13%)

Query: 66  PIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA------ 119
               S  +DYG+  + H       L  +L +     G         D +    +      
Sbjct: 9   EDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAV 68

Query: 120 -WLWVGAEMIHLMELPNPDPLSGRPEH------GGRDRHTCIAIRD----VSKLKMILDK 168
                   ++ + E  +      + +       G   +H  +   D    + +++     
Sbjct: 69  LASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI 128

Query: 169 AGISYTLS 176
            G  +  S
Sbjct: 129 GGFDFMPS 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	200
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.86
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.85
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.85
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.85
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.84
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.84
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.83
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.83
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.83
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.82
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.82
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.82
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.81
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.81
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.8
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.79
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.78
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.77
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.77
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.75
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.74
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.73
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.72
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.71
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.71
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.7
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.68
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.68
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.64
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.61
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.52
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.24
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.12
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.1
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.07
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.02
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.01
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.81
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.36
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.14
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	94.66
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	93.96
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	93.48
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	92.42
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	91.73
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	87.67
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	84.07
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	83.76
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	83.51
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	82.19
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	81.66
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	81.55
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	80.72

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.86  E-value=4.6e-21  Score=134.43  Aligned_cols=111  Identities=16%  Similarity=0.205  Sum_probs=89.9

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  157 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  157 (200)
                      ++++|+.|.|+|+++|++||+++||+++....+      ..+++..|+..+.+........    ... +...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~~----~~~-~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVPL----ENF-QSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSSC----CCC-CSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCCC----CCC-CcceEEEEEEC
Confidence            478999999999999999999999999876544      2367888998888876443221    112 23368999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          158 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       158 dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |+++++++++++|+++..+    ++|.+.++|+|||||+|||.+.+
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence            9999999999999988653    46778999999999999999863

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.85  E-value=2.3e-20  Score=134.74  Aligned_cols=114  Identities=24%  Similarity=0.375  Sum_probs=90.7

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +|++++||.|.|+|++++++||+++|||++.....      ...++..++....+........   .+.......|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeeccccccc---CCCcCCccceeeee
Confidence            47899999999999999999999999999987654      3456777877766665443322   12233455789998


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEEe
Q 029050          156 IR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       156 v~--dv~~~~~~l~~~G~~~~~~-~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +.  |+++++++|+++|+++... ..+++++||+|||||.|||.+.
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            85  8999999999999998664 3567899999999999999764

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.85  E-value=1.1e-20  Score=134.64  Aligned_cols=116  Identities=15%  Similarity=0.227  Sum_probs=90.7

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-CCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ++.+++||.|.|+|++++++||+++|||++....+... ......++..++..+.+.......        ..+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA--------ERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS--------SCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccccc--------ccceeeeee
Confidence            46799999999999999999999999999987655333 334567788888777776643322        124578999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          155 AIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       155 ~v~--dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .++  |+++++++++++|+++...    .++++.+||+|||||+|||.+.+
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            886  8999999999999998543    24578899999999999998653

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.85  E-value=3.4e-20  Score=134.55  Aligned_cols=124  Identities=14%  Similarity=0.211  Sum_probs=92.1

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC-----------CCCCceEEEEEeCC--eEEEEEecCCCCC---
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDP---  138 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~--~~~~l~~~~~~~~---  138 (200)
                      -.+++++||+|.|+|++++++||++ |||++..+...           .......+++...+  ..++|++......   
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            3578999999999999999999999 99999875432           12223456666643  4677665332221   


Q ss_pred             CCCCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeC
Q 029050          139 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       139 ~~~~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ....+....+..|++|.|+|+++++++|+++|+++..+    ..+.+.+|++|||||+|||+|.-
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEcc
Confidence            11222334567899999999999999999999998543    35668899999999999999864

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=6.9e-20  Score=131.19  Aligned_cols=111  Identities=22%  Similarity=0.358  Sum_probs=88.0

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      +|.+++||.|.|+|++++++||+++||+++..+.+      ...++..++..++..........      .....|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGGP------AADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC------CSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeecccccc------ccccccchhc
Confidence            47899999999999999999999999999987765      34667888877776654433211      1234567766


Q ss_pred             E--CCHHHHHHHHHHCCCeEEecC-CCceEEEEECCCCCeEEEEEe
Q 029050          156 I--RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       156 v--~dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +  +|+++++++|+++|+++...+ ++++.+||+|||||.|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            6  499999999999999986654 457899999999999999763

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=1.4e-20  Score=136.43  Aligned_cols=122  Identities=16%  Similarity=0.228  Sum_probs=86.7

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc-eEEEEEeCC----eEEEEEecCCCCCCCCCCCCCCcee
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      .|.+|+||+|.|+|++++++||+++|||++..+........ ...++..+.    ..+.+...+....   .....++++
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~   79 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR---TYRGTNAIT   79 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccC---CccCCCcee
Confidence            57899999999999999999999999999987654322111 111222221    2344444333221   111223578


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEEeCC
Q 029050          151 HTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       151 hi~f~v~d---v~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      |++|.|+|   ++++.++|++.|+.+...  ..+.+++||+|||||.|||++.++
T Consensus        80 Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          80 RIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             EEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            99999997   677899999999988543  357889999999999999998753

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.83  E-value=1.1e-20  Score=141.36  Aligned_cols=117  Identities=13%  Similarity=0.200  Sum_probs=85.3

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe---EEEEEecCCCCCCCCCCCCCCce
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRD  149 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---~~~l~~~~~~~~~~~~~~~~~~~  149 (200)
                      ....|++|+||.|.|+|++++++||+++|||++..+.+.     ...|...++.   .+.+.......   ..+. .+++
T Consensus         6 ~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~l   76 (170)
T d1zswa2           6 AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ-----EAIFQSIKGEAFGEIVVKYLDGPT---EKPG-RGSI   76 (170)
T ss_dssp             GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS-----EEEEESSTTCSTTCEEEEECCSSB---CBCC-BTCE
T ss_pred             hhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc-----eEEEEeccCccceEEEeccccccc---cccC-cccc
Confidence            445689999999999999999999999999999986541     2333323222   22222222221   1222 2367


Q ss_pred             eEEEEEECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEEe
Q 029050          150 RHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       150 ~hi~f~v~d---v~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +||+|.|+|   ++++++++++.|+++...  ..+++++||+|||||.|||+..
T Consensus        77 ~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          77 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             ceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            899999975   778899999999998543  4567899999999999999875

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.9e-20  Score=132.85  Aligned_cols=118  Identities=20%  Similarity=0.330  Sum_probs=84.5

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe----EEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      ++++|+.|+|+|+++|++||+++|||++..............++.....    ..........    ..........|++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   76 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC----CCCCCCSSEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc----ccccccccceeec
Confidence            4789999999999999999999999999876654444333333333221    1111111111    1122334568999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEeC
Q 029050          154 IAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       154 f~v~dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +.+++++++.++++++|..+...+     .+.+.+||+|||||.|||+|.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             cchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            999999999999999999875532     3568899999999999999975

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.83  E-value=5.7e-20  Score=131.66  Aligned_cols=105  Identities=17%  Similarity=0.183  Sum_probs=84.4

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeE--EEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      .|++|+||.|.|+|++++++||+++|||++..+.+      ..+|++.++..  +.+..  ..         ..+..|++
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~--~~---------~~~~~h~~   63 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQ--GE---------VDDLAFAG   63 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEE--CT---------TCEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEec--CC---------CCCceEEE
Confidence            37899999999999999999999999999987654      45778887653  44433  11         13578999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEE
Q 029050          154 IAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e  197 (200)
                      |.+.   |++++.++|+++|+++...+       .+.+.+||+|||||.|||+.
T Consensus        64 f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          64 YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             EEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence            9996   57788999999999987643       35678999999999999975

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.82  E-value=9.5e-20  Score=135.06  Aligned_cols=116  Identities=15%  Similarity=0.239  Sum_probs=85.9

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      |...+++||.|.|+|++++++||+++|||++..............|+..+............        ..++..|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP--------EKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS--------SSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccC--------CCCccceeEE
Confidence            56778999999999999999999999999998766655554455555555432211111111        1235789999


Q ss_pred             EECCHH---HHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          155 AIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .+.+.+   +++++|+++|+++...+     .+.+++||+|||||.|||.+.
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            998655   77899999999885432     245889999999999999864

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=2.3e-20  Score=129.55  Aligned_cols=107  Identities=16%  Similarity=0.226  Sum_probs=80.7

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      ++|+||.|.|+|++++++||+++|||++..+.+.     ...++..+ +..+.+.......        .++..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeecceeeeeeeeeeccc--------ccccceeeeee
Confidence            5789999999999999999999999999876542     22333333 3355555533322        13457999999


Q ss_pred             CC---HHHHHHHHHHCCCeEEecC-CCceEEEEECCCCCeEEEEE
Q 029050          157 RD---VSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       157 ~d---v~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +|   +++++++++++|+++...+ .+++.+||+|||||.|||.+
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEEC
T ss_pred             ccccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEEC
Confidence            86   6788999999999976543 45789999999999999964

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.82  E-value=5.1e-20  Score=132.76  Aligned_cols=125  Identities=14%  Similarity=0.223  Sum_probs=92.8

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEE------eCCeEEEEEecCCCCCCCC----CCC
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSG----RPE  144 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~------~g~~~~~l~~~~~~~~~~~----~~~  144 (200)
                      -++.+|+||+|.|+|+++|++||+++||++..........+....+..      .+...+++++.........    ...
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            358899999999999999999999999999987655444443333332      3456888887554432211    122


Q ss_pred             CCCceeEEEEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCeEEEEEeC
Q 029050          145 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVD  199 (200)
Q Consensus       145 ~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~-----~~g~~~~~~--~DPdGn~iEl~e~~  199 (200)
                      ...++.|+||.|+|+++++++|+++|+++..+     ..|.+.+|+  +||||++|||+|..
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            34578999999999999999999999998432     234455555  69999999999964

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.4e-19  Score=133.21  Aligned_cols=125  Identities=16%  Similarity=0.217  Sum_probs=89.4

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe-------------------EEEEEecCC
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------------MIHLMELPN  135 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-------------------~~~l~~~~~  135 (200)
                      ....+++|++|+|+|+++|++||+++|||++.........+....|+..+..                   ...+.....
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            3345799999999999999999999999999876655555555555544321                   122222211


Q ss_pred             C--CCCC---CCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          136 P--DPLS---GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       136 ~--~~~~---~~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      .  ....   .......++.|+++.++|+++++++|+++|+++...+   .+...+||+|||||.|||+|+.
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence            1  1111   1112334678999999999999999999999997753   2356689999999999999864

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.81  E-value=1.2e-19  Score=128.98  Aligned_cols=118  Identities=21%  Similarity=0.275  Sum_probs=86.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe---EEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      .+++||+|.|+|+++|++||+++|||++..............+......   ...........   ..........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGV---TSYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTC---CCCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCc---ccccCCCccceeee
Confidence            4799999999999999999999999999876554333332233333221   11111111111   11123345578999


Q ss_pred             EECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEEe
Q 029050          155 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .++++.++++.+...++++...+.+.+.+||+|||||+|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999998888888999999999999999984

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.80  E-value=2e-19  Score=129.00  Aligned_cols=106  Identities=13%  Similarity=0.150  Sum_probs=84.0

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      |.+|+||.|.|+|++++++||+++|||++..+.+      ..+|++.++....+......         ..+..|++|.+
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccC---------CCCceEEEEEe
Confidence            6799999999999999999999999999987654      45788887653223222221         13578999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEE
Q 029050          157 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       157 ~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdGn~iEl~e  197 (200)
                      .   |++++.++++++|+++...+       .....+||+|||||.|||+.
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence            6   67889999999999987643       34578999999999999984

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.79  E-value=1.2e-18  Score=126.81  Aligned_cols=113  Identities=19%  Similarity=0.220  Sum_probs=84.6

Q ss_pred             CCCCCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe----EEEEEecCCCCCCCCCCC
Q 029050           69 DSDKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPE  144 (200)
Q Consensus        69 ~~~~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~----~~~l~~~~~~~~~~~~~~  144 (200)
                      ....+...|++++||.|.|+|++++++||+++|||++....+      ...++...+.    .+.+...+          
T Consensus         6 ~p~~p~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------   69 (146)
T d1f1ua1           6 TPSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP----------   69 (146)
T ss_dssp             CCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS----------
T ss_pred             CCCCCCCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------CceeeecccccccceeeccccC----------
Confidence            334455679999999999999999999999999999997654      2344443322    12221111          


Q ss_pred             CCCceeEEEEEEC---CHHHHHHHHHHCCCeEEecC----C-CceEEEEECCCCCeEEEEEe
Q 029050          145 HGGRDRHTCIAIR---DVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       145 ~~~~~~hi~f~v~---dv~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdGn~iEl~e~  198 (200)
                       ..+..|++|.+.   |++++.++|+++|+++...+    . +++.+||+|||||.|||++.
T Consensus        70 -~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          70 -IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             -SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             -CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence             135789999997   68899999999999986542    2 35789999999999999863

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.78  E-value=2.4e-19  Score=129.05  Aligned_cols=118  Identities=14%  Similarity=0.157  Sum_probs=85.0

Q ss_pred             eceEeEEEEE----cCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEE--EEEecCCCCCCCCCCCCCCcee
Q 029050           77 VVSVHHVGIL----CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI--HLMELPNPDPLSGRPEHGGRDR  150 (200)
Q Consensus        77 i~~l~hv~l~----v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~  150 (200)
                      +.++.|+.++    |+|++++++||+++|||++..+.... .++..+|+..++..+  .+...+....    +....+..
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~   77 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDS   77 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTC
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCCceeeeccccccccc----ccccccCc
Confidence            4456666665    58999999999999999998765432 235667777766544  4444333221    12334457


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEeC
Q 029050          151 HTCIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       151 hi~f~v~d---v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      |++|.|++   +++++++|+++|+++....   ++.+.+||+|||||+|||....
T Consensus        78 hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          78 LLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             eEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence            99999975   7788999999999987643   3568899999999999998654

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.77  E-value=1e-18  Score=124.00  Aligned_cols=117  Identities=19%  Similarity=0.238  Sum_probs=81.8

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEecCCC--CCCCCCCCCCCceeEEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNP--DPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~~~~~--~~~~~~~~~~~~~~hi~f~  155 (200)
                      +|+||+|.|+|++++++||++ ||+.+........    .+++..+ +..+.+......  ..........++..|++|.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            689999999999999999977 8998776544222    2334443 335555432111  0001112222344799999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEeCC
Q 029050          156 IRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       156 v~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                      |.+   +++++++++++|+++..+    .+|.+.+||+|||||+|||.++-|
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecCC
Confidence            986   677899999999998553    357799999999999999999865

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.77  E-value=1.5e-18  Score=119.57  Aligned_cols=106  Identities=18%  Similarity=0.214  Sum_probs=77.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEEC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  157 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~  157 (200)
                      +++ ++.|.|+|++++++||+++|||++....+      ....+..++....+........      .+....|+.|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGG------SGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSB------TTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccccceeeecccccC------CCCceeEEEEEec
Confidence            345 57899999999999999999999987654      1223334333333322222111      1123368999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 029050          158 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       158 dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~  196 (200)
                      |+++++++++++|+++..+    ++|.+.+|++|||||+|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            9999999999999987443    46779999999999999985

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.75  E-value=5.7e-18  Score=125.29  Aligned_cols=126  Identities=13%  Similarity=0.124  Sum_probs=96.4

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCC--CceEEEEEeCCeEEEEEecCCCCCCCC------CCCC
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDPLSG------RPEH  145 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~l~~~~~~~~~~~------~~~~  145 (200)
                      +..|.+++||.|+|+|+++|++||+++|||+++.....+..  ......+..++..+.|...........      ...+
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcC
Confidence            46789999999999999999999999999999876543322  223455677888888887655432111      0124


Q ss_pred             CCceeEEEEEECCHHHHHHHHHHCCCeEEecC------CC-ceEEEEECCCCCeEEEEEeC
Q 029050          146 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       146 ~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdGn~iEl~e~~  199 (200)
                      +.+..||||.|+|+++++++|+++|+++...+      .| ...+++++|+|..++|+|..
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            56789999999999999999999999885532      12 36689999999999998853

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.74  E-value=5.6e-17  Score=113.56  Aligned_cols=102  Identities=23%  Similarity=0.332  Sum_probs=82.0

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHHHH
Q 029050           84 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  163 (200)
Q Consensus        84 ~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~~~  163 (200)
                      .|.|+|+++|++||++ |||++....+      ..+++..++..+.+.......+.       ....++++.++|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDPL-------ASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCGG-------GCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceeccccccccccccC-------CCCcEEEEEECCHHHHH
Confidence            3999999999999988 9999987654      34667778888888776654321       12357999999999999


Q ss_pred             HHHHHCCCeEEe-----------cCCCceEEEEECCCCCeEEEEEeC
Q 029050          164 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       164 ~~l~~~G~~~~~-----------~~~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                      ++++++|+.+..           .++|.+.+||+|||||+|||.|.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            999999887622           235789999999999999999975

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.73  E-value=1.2e-17  Score=125.36  Aligned_cols=112  Identities=17%  Similarity=0.235  Sum_probs=81.3

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      +.+|+||+|.|+|++++++|| ++|||++.............+|+..++....+......         ..+..|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------GPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------BSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc---------CCCccceeEEe
Confidence            678999999999999999999 67999998765544544556777766543222222211         13579999999


Q ss_pred             CC---HHHHHHHHHHCCCeE--Eec-----CCCceEEEEECCCCCeEEEEEe
Q 029050          157 RD---VSKLKMILDKAGISY--TLS-----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       157 ~d---v~~~~~~l~~~G~~~--~~~-----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .+   +.++.++|+++|+..  ...     .....++||+|||||.|||...
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            85   456678999999853  222     1345789999999999999863

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.72  E-value=1.5e-17  Score=120.30  Aligned_cols=108  Identities=17%  Similarity=0.196  Sum_probs=76.7

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCe--EEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      .|++|+||.|.|+|++++++||+++|||++........     .+....+.  ...+......         ..+..|++
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~   69 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeeccccccC---------cccceeee
Confidence            48899999999999999999999999999987644221     12222221  1111111111         12346777


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEecC----CC-ceEEEEECCCCCeEEEEE
Q 029050          154 IAIR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       154 f~v~---dv~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdGn~iEl~e  197 (200)
                      +.+.   |+++++++|+++|+++...+    .+ ++.+||+|||||.|||++
T Consensus        70 ~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~  121 (145)
T d1mpya1          70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYA  121 (145)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEES
T ss_pred             eeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEE
Confidence            7765   78899999999999886542    23 489999999999999985

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=5e-17  Score=120.52  Aligned_cols=130  Identities=13%  Similarity=0.081  Sum_probs=95.1

Q ss_pred             CCCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceE--EEEEeCCeEEEEEecCCCCCCC--------
Q 029050           71 DKIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG--AWLWVGAEMIHLMELPNPDPLS--------  140 (200)
Q Consensus        71 ~~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~--~~l~~g~~~~~l~~~~~~~~~~--------  140 (200)
                      ...++.+.+++||+|.|+|++++++||+++|||+...+...+......  ..+..++..+.+..........        
T Consensus         4 ~~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~   83 (167)
T d1sqda1           4 KSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTT   83 (167)
T ss_dssp             CCCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCC
T ss_pred             CCCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccc
Confidence            345788999999999999999999999999999998765543332222  2244555555554432211100        


Q ss_pred             ---C-C---------CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeCC
Q 029050          141 ---G-R---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVDG  200 (200)
Q Consensus       141 ---~-~---------~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~~  200 (200)
                         . .         ..++.++.||||.|+|+++++++|+++|+++..++    ++.+.++++.+++..++|+|..+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          84 ASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             cccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence               0 0         01345789999999999999999999999986543    46677899999999999998753

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.3e-17  Score=119.21  Aligned_cols=126  Identities=13%  Similarity=0.106  Sum_probs=94.0

Q ss_pred             CceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCc--eEEEEEeCCeEEEEEecCCCCCCCC---CCCCCCc
Q 029050           74 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY--RGAWLWVGAEMIHLMELPNPDPLSG---RPEHGGR  148 (200)
Q Consensus        74 ~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~--~~~~l~~g~~~~~l~~~~~~~~~~~---~~~~~~~  148 (200)
                      ...+.+++||+|.|+|++++++||+++|||+.......+....  ....+..++..+.|...........   ...++.+
T Consensus         6 ~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1           6 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             CCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            4567899999999999999999999999999987654333222  2334566777888876554332110   1234668


Q ss_pred             eeEEEEEECCHHHHHHHHHHCCCeEEecC------CCc-eEEEEECCCCCeEEEEEeC
Q 029050          149 DRHTCIAIRDVSKLKMILDKAGISYTLSK------SGR-PAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       149 ~~hi~f~v~dv~~~~~~l~~~G~~~~~~~------~g~-~~~~~~DPdGn~iEl~e~~  199 (200)
                      +.||||.|+|+++++++|+++|+++...+      .|. +.+++..|+|..+||+|..
T Consensus        86 ~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~  143 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKI  143 (149)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeC
Confidence            89999999999999999999999875432      222 4578888989999999864

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.70  E-value=1e-16  Score=112.15  Aligned_cols=101  Identities=17%  Similarity=0.188  Sum_probs=81.6

Q ss_pred             EEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHHHH
Q 029050           84 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  163 (200)
Q Consensus        84 ~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~~~  163 (200)
                      .|.|+|+++|++||+++|||++....+      ..+++..++..+++........        ....++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~--------~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQIV--------ADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHHH--------HTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeeccccccc--------cceeEEEEeechhHHHH
Confidence            489999999999999999999987654      3467888998888887654321        12357999999999999


Q ss_pred             HHHHHCCCeEEe-----------cCCCceEEEEECCCCCeEEEEEe
Q 029050          164 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       164 ~~l~~~G~~~~~-----------~~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +++++++.....           ..++++.+||+|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            999999876521           12567899999999999999864

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.68  E-value=1.3e-16  Score=117.31  Aligned_cols=113  Identities=16%  Similarity=0.202  Sum_probs=78.0

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC---CCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEE
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  153 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~  153 (200)
                      ..+|+||.|.|+|++++++||+++|||++......   ........|+..+.....+.....+        ...+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~--------~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP--------IPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS--------CSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCC--------CCCceeEEE
Confidence            35899999999999999999999999998753221   1111233455555443222222211        123689999


Q ss_pred             EEECC---HHHHHHHHHHCCCeEEec-C---CCceEEEEECCCCC-eEEEEE
Q 029050          154 IAIRD---VSKLKMILDKAGISYTLS-K---SGRPAIFTRDPDAN-ALEFTQ  197 (200)
Q Consensus       154 f~v~d---v~~~~~~l~~~G~~~~~~-~---~g~~~~~~~DPdGn-~iEl~e  197 (200)
                      |.|++   +.+++++|+++|+.+... +   +...++|++||||| .+|+..
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             EECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            99974   556799999999865322 1   34578999999998 589875

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.68  E-value=6e-16  Score=115.36  Aligned_cols=128  Identities=13%  Similarity=0.088  Sum_probs=95.3

Q ss_pred             CCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCce--EEEEEeCCeEEEEEecCCCCCCCC--------
Q 029050           72 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYR--GAWLWVGAEMIHLMELPNPDPLSG--------  141 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~--~~~l~~g~~~~~l~~~~~~~~~~~--------  141 (200)
                      .....+.+++||+|.|+|++++++||+++|||+.+.+.........  ...+..+...+.+...........        
T Consensus         6 ~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (172)
T d1sp8a1           6 SDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFS   85 (172)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCC
T ss_pred             CccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCC
Confidence            4567899999999999999999999999999999876553332222  223455666666654333221100        


Q ss_pred             -------CCCCCCceeEEEEEECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEEeC
Q 029050          142 -------RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  199 (200)
Q Consensus       142 -------~~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e~~  199 (200)
                             ...++.++.||||.|+|+++++++++++|+++..++    +|.+.++++.|.+..+||+|..
T Consensus        86 ~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          86 AAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             HHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             cchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence                   012456889999999999999999999999986543    5668899999988889999865

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.64  E-value=2.6e-15  Score=104.26  Aligned_cols=101  Identities=12%  Similarity=0.133  Sum_probs=78.8

Q ss_pred             EEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEECCHHHH
Q 029050           83 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  162 (200)
Q Consensus        83 v~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v~dv~~~  162 (200)
                      ..|.|+|+++|++||+++|||++..+.+      ...++..++..+++........        .+..++.+.+.+++.+
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVV--------PDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTTT--------GGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeeccccccccC--------CCCceEEEeeccHHHH
Confidence            4489999999999999999999988655      3467888888888887654432        1236788999999999


Q ss_pred             HHHHHHCCCeEEe-----------cCCCceEEEEECCCCCeEEEEE
Q 029050          163 KMILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       163 ~~~l~~~G~~~~~-----------~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      ++++.+++.+...           ..++++.+||+|||||.|||..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            9888876654311           1245689999999999999985

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.61  E-value=7e-15  Score=104.86  Aligned_cols=115  Identities=11%  Similarity=0.038  Sum_probs=80.9

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-------CCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEARPHDK-------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-------~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ++.+.+.|.++|++||+++||+++..+.....       .....+.|.+++..+.+...............+ ...+|++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEG-SGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTS-CCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCCC-cceEEEE
Confidence            46677789999999999999999876443221       112235577788777666543222211222222 3358999


Q ss_pred             EECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEE
Q 029050          155 AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       155 ~v~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdGn~iEl~e  197 (200)
                      .++|++++++++.++|+++..+.    +|.+.++|+||+||.|+|.|
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            99999999999999999987653    57889999999999999976

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.52  E-value=8e-15  Score=106.99  Aligned_cols=121  Identities=11%  Similarity=0.014  Sum_probs=89.5

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEE
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  152 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi  152 (200)
                      +++.+.+++||.+.|+|++++.+||+. |||+...+....    ....+..|+..+.+...+..........++.++.|+
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~i~ll~~~~~~s~~~~~~~~hg~gv~hi   77 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGM   77 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCcEEEEecCCCCCHhHhHHhhCCCceEEE
Confidence            467899999999999999999999987 999999765422    234456666555443322211111124477889999


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEEe
Q 029050          153 CIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       153 ~f~v~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +|+|+|+++++++++++|++....+   .......++.|+|.++.|++.
T Consensus        78 af~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          78 AFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            9999999999999999999875543   233567788899999988875

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.24  E-value=1.4e-11  Score=95.09  Aligned_cols=101  Identities=14%  Similarity=0.132  Sum_probs=70.3

Q ss_pred             CCCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCC-----CCceEEEEEeC--CeEEEEEecCCCCCCCCC--
Q 029050           72 KIDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNPDPLSGR--  142 (200)
Q Consensus        72 ~~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g--~~~~~l~~~~~~~~~~~~--  142 (200)
                      .++.++.+++||++.|+|++++++||+++|||+..+......     .......+..+  ...+.+.+...+......  
T Consensus         2 ~~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~   81 (224)
T d1sp8a2           2 AADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQ   81 (224)
T ss_dssp             CCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHH
T ss_pred             CCCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHH
Confidence            356789999999999999999999999999999876543221     22233334443  346667665433221111  


Q ss_pred             ----CCCCCceeEEEEEECCHHHHHHHHHHCCCe
Q 029050          143 ----PEHGGRDRHTCIAIRDVSKLKMILDKAGIS  172 (200)
Q Consensus       143 ----~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~  172 (200)
                          ...+.|++||||.|+|+.++++.|+++|+.
T Consensus        82 ~FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          82 TFLDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHHHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence                113468999999999999999999988643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.12  E-value=5.3e-11  Score=90.46  Aligned_cols=99  Identities=14%  Similarity=0.104  Sum_probs=68.2

Q ss_pred             eeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecCCCCC--CceEEEEEeCCe--EEEEEecCCCCC-CCC---CCCC
Q 029050           76 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAE--MIHLMELPNPDP-LSG---RPEH  145 (200)
Q Consensus        76 ~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~--~~~l~~~~~~~~-~~~---~~~~  145 (200)
                      ++.+++||++.|+  |+++++.||+++|||+.....+....  ......+.....  .+.+...+.... ...   ....
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            4678999999997  99999999999999999876542222  122233444432  333433322211 001   0124


Q ss_pred             CCceeEEEEEECCHHHHHHHHHHCCCeEE
Q 029050          146 GGRDRHTCIAIRDVSKLKMILDKAGISYT  174 (200)
Q Consensus       146 ~~~~~hi~f~v~dv~~~~~~l~~~G~~~~  174 (200)
                      +.|++||||.|+|+.+++++|+++|+++.
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL  110 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFM  110 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccc
Confidence            56889999999999999999999999874

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.10  E-value=4e-09  Score=74.61  Aligned_cols=106  Identities=14%  Similarity=0.035  Sum_probs=72.2

Q ss_pred             CCHHHHHHHHHhccCCEEeeecCCCC------------CCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEE
Q 029050           88 ENLERSLEFYQNILGLEINEARPHDK------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  155 (200)
Q Consensus        88 ~Dl~~s~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~  155 (200)
                      .|.+++++||+++||+++........            .....+.|.+++..+.+.......+     ...+...++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~~-----~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYP-----YEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSC-----CCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCccc-----ccCCCcEEEEEE
Confidence            59999999999999999976432211            1112245677777666554332211     112233678898


Q ss_pred             ECCHH--HHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          156 IRDVS--KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       156 v~dv~--~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      +++.+  +.+.+..++|.++..+    ++|.+..+|+||+|+.|+|...
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            88554  5577777889988654    4677889999999999999864

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.3e-10  Score=87.21  Aligned_cols=102  Identities=13%  Similarity=0.075  Sum_probs=68.8

Q ss_pred             CCceeceEeEEEEEcCC--HHHHHHHHHhccCCEEeeecCCCC-----CCceEEEEEeCC--eEEEEEecCCCCCCCC--
Q 029050           73 IDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVGA--EMIHLMELPNPDPLSG--  141 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~D--l~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~--~~~~l~~~~~~~~~~~--  141 (200)
                      ++.++..++||.+.|++  +++++.||+++|||+..+......     ...+...+..++  ..+.+...........  
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHH
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHH
Confidence            45678999999999987  999999999999999876432111     112223344443  3555554332211111  


Q ss_pred             C---CCCCCceeEEEEEECCHHHHHHHHHHCCCeEE
Q 029050          142 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  174 (200)
Q Consensus       142 ~---~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~  174 (200)
                      .   ...+.|++||||.|+|+.++.++|+++|+++.
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL  133 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFL  133 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBC
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCC
Confidence            0   12467899999999999999999999999873

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.02  E-value=1.3e-09  Score=82.32  Aligned_cols=100  Identities=13%  Similarity=0.127  Sum_probs=67.3

Q ss_pred             eeceEeEEEEEcC--CHHHHHHHHHhccCCEEeeecCC-----CCCCceEEEEEeCC--eEEEEEecCCCCCCC--CC--
Q 029050           76 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWVGA--EMIHLMELPNPDPLS--GR--  142 (200)
Q Consensus        76 ~i~~l~hv~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~g~--~~~~l~~~~~~~~~~--~~--  142 (200)
                      ...+++||++.|+  ++++++.||+++|||+.......     ........-+..++  ..+.+..........  ..  
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            3568999999998  99999999999999998764321     11222222233333  345554322211111  10  


Q ss_pred             -CCCCCceeEEEEEECCHHHHHHHHHHCCCeEEe
Q 029050          143 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  175 (200)
Q Consensus       143 -~~~~~~~~hi~f~v~dv~~~~~~l~~~G~~~~~  175 (200)
                       ...++|++||||.|+|+.++.+.|+++|+++..
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~  116 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLD  116 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCC
Confidence             124568999999999999999999999998743

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.01  E-value=7.5e-10  Score=85.41  Aligned_cols=99  Identities=15%  Similarity=0.176  Sum_probs=67.4

Q ss_pred             CCceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCC-----ceEEEEEeC--CeEEEEEecCCCCCCCCC---
Q 029050           73 IDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-----YRGAWLWVG--AEMIHLMELPNPDPLSGR---  142 (200)
Q Consensus        73 ~~~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~-----~~~~~l~~g--~~~~~l~~~~~~~~~~~~---  142 (200)
                      .+..+.+++||++.|+|++++.+||..+||+............     ....-+..+  ...+.+.+...+......   
T Consensus        16 ~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          16 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHH
Confidence            3567899999999999999999999999999998765433211     112223332  346666654433211110   


Q ss_pred             ---CCCCCceeEEEEEECCHHHHHHHHHHCCC
Q 029050          143 ---PEHGGRDRHTCIAIRDVSKLKMILDKAGI  171 (200)
Q Consensus       143 ---~~~~~~~~hi~f~v~dv~~~~~~l~~~G~  171 (200)
                         ...+.|++||||.|+|+.++.++|+++|.
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence               22467899999999999999999998643

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.81  E-value=3.5e-07  Score=64.23  Aligned_cols=110  Identities=8%  Similarity=0.036  Sum_probs=71.4

Q ss_pred             EEEEEcCCHHHHHHHHHhccCCEEeeec-------CCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           82 HVGILCENLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        82 hv~l~v~Dl~~s~~FY~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ++.+.-.|.+++++||+++||...+...       +......-.+-|.+++..+.+.........    ..+. ...+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~~----~~~~-~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAF----DFTP-AFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSC----CCCT-TEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCCC----CCCC-ceEEEE
Confidence            4555557999999999999998764321       111222234567888888887764432211    1222 256888


Q ss_pred             EECCHHHH--HHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 029050          155 AIRDVSKL--KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       155 ~v~dv~~~--~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~  196 (200)
                      .+++.++.  +.+..++|.++..+    .+|.+...++||.|+.|.|.
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            88765433  44445667777543    46788999999999999986

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.36  E-value=9.7e-06  Score=56.25  Aligned_cols=106  Identities=10%  Similarity=0.126  Sum_probs=65.8

Q ss_pred             EEEEc-CCHHHHHHHHHhccCCE-Eeeec------CCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEE
Q 029050           83 VGILC-ENLERSLEFYQNILGLE-INEAR------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  154 (200)
Q Consensus        83 v~l~v-~Dl~~s~~FY~~vLG~~-~~~~~------~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f  154 (200)
                      ..|.. .|.+++++||+++||-. +....      +......-.+-|.+++..+.+.......+.         -.++++
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~~~---------~~s~~v   78 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTEL---------PISLFV   78 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCCCC---------CEEEEe
Confidence            34555 49999999999999654 33211      112222334568888887777653332211         134777


Q ss_pred             EECCHHH---HHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEEe
Q 029050          155 AIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       155 ~v~dv~~---~~~~l~~~G~~~~~~----~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .+++.++   ++++|. +|.++...    .+|.+...+.||.|+.|.|..+
T Consensus        79 ~~~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          79 TVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             ECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             ccCCHHHHHHHHHHhc-cCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            8886665   455665 45566443    4677888999999999999764

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.14  E-value=0.011  Score=41.58  Aligned_cols=100  Identities=11%  Similarity=-0.040  Sum_probs=62.1

Q ss_pred             EEcCCHHHHHHHHHhccCCE-Eeeec-------CCCCCCceEEEEEeCCeEEEEEecCCCCCCCCCCCCCCceeEEEEEE
Q 029050           85 ILCENLERSLEFYQNILGLE-INEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  156 (200)
Q Consensus        85 l~v~Dl~~s~~FY~~vLG~~-~~~~~-------~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~~~~~~~~~~~~hi~f~v  156 (200)
                      +.-.|.+++++||.++||-. +....       +......-.+.|.+++..+.+......     . ..+.+ .++++.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~~~-----~-~~~~~-~sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPA-----F-RHSEA-FSFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCTT-----C-CCCTT-EEEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCCCC-----C-CCCCC-eEEEEec
Confidence            34589999999999999643 33211       111222334567888876655443211     1 12222 5789999


Q ss_pred             CCH---HHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEE
Q 029050          157 RDV---SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  197 (200)
Q Consensus       157 ~dv---~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~e  197 (200)
                      +|.   ++++++|.+.| .+... -    ..++|..|..|.|+.
T Consensus        81 d~~eE~d~~f~~LsegG-~~~~~-~----G~v~DkFGV~Wqi~~  118 (156)
T d1u69a_          81 DDQAETDRLWNAIVDNG-GEESA-C----GWCRDKWGISWQITP  118 (156)
T ss_dssp             SSHHHHHHHHHHHHHTT-CEECS-T----TEEECTTSCEEEEEE
T ss_pred             CCHHHHHHHHHHHhccC-CCCCC-C----eEEECCCCCEEEeCh
Confidence            864   56688887776 33322 2    269999999999984

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.66  E-value=0.065  Score=37.18  Aligned_cols=59  Identities=15%  Similarity=0.061  Sum_probs=43.9

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEE-eCCeEEEEEecCCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPD  137 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~~~l~~~~~~~  137 (200)
                      .++.||+|.|.|++++.+...+ .|.+++..........+.+++. .|+..+.|++..+.+
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~~  162 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAED  162 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCCc
Confidence            3899999999999999999998 7999886533223334555544 478889999876543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=93.96  E-value=0.088  Score=36.85  Aligned_cols=58  Identities=14%  Similarity=0.127  Sum_probs=45.0

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  136 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~  136 (200)
                      .++.||+|.|.|++++.+-..+ .|.++.........+.+.++++. |+..++|++.++.
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTT
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCC
Confidence            4899999999999999999998 99998764432233445666654 6788999988765

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=93.48  E-value=0.16  Score=33.86  Aligned_cols=57  Identities=16%  Similarity=0.155  Sum_probs=39.3

Q ss_pred             ceeceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEEeC-CeEEEEEe
Q 029050           75 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLME  132 (200)
Q Consensus        75 ~~i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g-~~~~~l~~  132 (200)
                      ....++.|+++.|.|+++..+..++ .|.++.........+.+.+|++-. +..++|++
T Consensus        89 ~~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e  146 (149)
T d1ss4a_          89 VNALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAE  146 (149)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             CCCcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEE
Confidence            3456899999999999999999998 899886533222233344555443 44677765

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=92.42  E-value=0.32  Score=30.63  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=39.5

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEEe
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      ++.|+.+.|+|+++..+-..+ .|.+...... ...++..++++..+.+.+.
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec-Ccceeeeecceeeeeeeee
Confidence            468999999999999888876 7998866543 3466778888888888764

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=91.73  E-value=0.1  Score=34.64  Aligned_cols=57  Identities=14%  Similarity=0.262  Sum_probs=40.6

Q ss_pred             eceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC-CCCCceEEEEEe---CCeEEEEEecC
Q 029050           77 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWV---GAEMIHLMELP  134 (200)
Q Consensus        77 i~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~l~~---g~~~~~l~~~~  134 (200)
                      ..+++|+++.|.|++++.+-.++ .|.++....+. ...+...+|+..   ++..++|++.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            45799999999999999999998 79988643321 122334555532   56688888764

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=87.67  E-value=0.47  Score=32.36  Aligned_cols=56  Identities=11%  Similarity=0.079  Sum_probs=39.5

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEEE-eCCeEEEEEecCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPN  135 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~~~l~~~~~  135 (200)
                      .++.||.|.|.|++++.+.... +|.+++..... ........++ .|+..+.|++..+
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~-~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTG-PMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCC-TTCBCCCEEECGGGCEEEEECCCS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCC-CCceeeeEEEcCCCCEEEEECcCC
Confidence            4899999999999999999988 99998764332 2222222233 3567888887544

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=84.07  E-value=1.9  Score=28.97  Aligned_cols=52  Identities=12%  Similarity=0.111  Sum_probs=36.4

Q ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEEecC-----CCceEEEEECCCCCeEEEEEe
Q 029050          147 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK-----SGRPAIFTRDPDANALEFTQV  198 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~-----~g~~~~~~~DPdGn~iEl~e~  198 (200)
                      .++.|++|.|.|++++.+..+. .|.+.....     ......++....+..+++.++
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            3579999999999999999986 799875421     123344444445666777764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=83.76  E-value=0.94  Score=29.10  Aligned_cols=49  Identities=14%  Similarity=0.147  Sum_probs=33.7

Q ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEE
Q 029050          148 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  196 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdGn~iEl~  196 (200)
                      ++.|+++.|.|+++..+-.++.|..+.........+.+..+++..+.+.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWD   50 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeeec
Confidence            4689999999999999888888887755433333344545555555544

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=83.51  E-value=2.9  Score=26.96  Aligned_cols=48  Identities=19%  Similarity=0.174  Sum_probs=33.7

Q ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEE-CCCCCeEEEEE
Q 029050          148 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFTQ  197 (200)
Q Consensus       148 ~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~-DPdGn~iEl~e  197 (200)
                      ++.|+++.|+|++++.+-.++ .|.++....++  .++++ |-..+.+.+.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN--GDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEESSSBSCSEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc--ceEEeecCCceEEEEec
Confidence            478999999999999999988 59988765443  34444 33344555543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.19  E-value=1.3  Score=29.32  Aligned_cols=59  Identities=22%  Similarity=0.141  Sum_probs=39.2

Q ss_pred             ceEeEEEEEcCCHHHHHHHHHhccCCEEeeecCC--CCC-CceEEEEEe-CCeEEEEEecCCCC
Q 029050           78 VSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKL-PYRGAWLWV-GAEMIHLMELPNPD  137 (200)
Q Consensus        78 ~~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~--~~~-~~~~~~l~~-g~~~~~l~~~~~~~  137 (200)
                      .++.||++.|.|++++.+-..+ .|.+++.....  +.. ....+++.. |+..+.|++..+..
T Consensus        84 ~G~~hiaf~V~di~~~~~~l~~-~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~  146 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKARE-RGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYT  146 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHH-HTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCC
T ss_pred             CeEEEEEEEeccHHHHHHHHHH-CCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCc
Confidence            4799999999999999999988 89887653211  111 112233332 45677888765543

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=81.66  E-value=4.8  Score=25.91  Aligned_cols=59  Identities=8%  Similarity=0.071  Sum_probs=35.0

Q ss_pred             eeceEeEEEEEcCCHHHHHHHHHhc--cCCEEeeecCCCCCCceEEEEEe-CCeEEEEEecCCC
Q 029050           76 GVVSVHHVGILCENLERSLEFYQNI--LGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  136 (200)
Q Consensus        76 ~i~~l~hv~l~v~Dl~~s~~FY~~v--LG~~~~~~~~~~~~~~~~~~l~~-g~~~~~l~~~~~~  136 (200)
                      ...+++|+++.|.|.+.-.+|...+  .|........  ..+....|+.- ++..++|+...+.
T Consensus        74 ~~~~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~--~~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          74 GTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT--YANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             CBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE--ETTEEEEEEECTTCCEEEEEECTTC
T ss_pred             CCCceeEEEEecCCchhHHHHhhhhhccceeeeCccc--cCCeEEEEEECCCCCEEEEEEeCCC
Confidence            3457999999999965554444332  6776643221  12234444544 4568998875543

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.55  E-value=1.4  Score=29.13  Aligned_cols=41  Identities=17%  Similarity=0.103  Sum_probs=28.4

Q ss_pred             eEeEEEEEcCCHHHHHHHHHhccCCEEeeecCCCCCCceEEEE
Q 029050           79 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWL  121 (200)
Q Consensus        79 ~l~hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l  121 (200)
                      ++.++.+.+.|.. +++||+. +||+.....+....+....||
T Consensus        93 g~~~i~l~~~n~~-a~~fY~k-~GF~~~g~~~~~~~~~~~~~m  133 (137)
T d2g3aa1          93 GCMGAYIDTMNPD-ALRTYER-YGFTKIGSLGPLSSGQSITWL  133 (137)
T ss_dssp             TCCEEEEEESCHH-HHHHHHH-HTCEEEEEECCCTTSCCEEEE
T ss_pred             CCceEEEecccHh-hHHHHHh-CCCEEEEEECCCCCCCcEEEE
Confidence            3556778787764 7999999 899999876654433333444

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=80.72  E-value=2.3  Score=29.04  Aligned_cols=32  Identities=13%  Similarity=0.150  Sum_probs=27.1

Q ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEEecCC
Q 029050          147 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKS  178 (200)
Q Consensus       147 ~~~~hi~f~v~dv~~~~~~l~~-~G~~~~~~~~  178 (200)
                      .+++||++.|.|+++..+-... .|.++....+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~   43 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND   43 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC
Confidence            5789999999999999998887 6998876543