Your job contains 1 sequence.
>029051
MNSSSFSKATSLLQAHNVTNNHNPKTSLPEIKPKATQNPIPSRRNFVTTLISTSLALVGL
HGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRM
AWRYVIFYIRLKQAYLSQDLKTAFSTLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYE
SYLYYEKALKNLDDIVAMFA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029051
(200 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035775 - symbol:PnsL2 "Photosynthetic NDH su... 499 9.8e-48 1
TAIR|locus:2127393 - symbol:PSBQA "photosystem II subunit... 172 4.4e-13 1
TAIR|locus:2115703 - symbol:PSBQ-2 "photosystem II subuni... 169 9.1e-13 1
UNIPROTKB|P83646 - symbol:OsI_025465 "Oxygen-evolving enh... 145 1.0e-12 2
TAIR|locus:2096707 - symbol:PnsL3 "Photosynthetic NDH su... 117 2.2e-05 1
>TAIR|locus:2035775 [details] [associations]
symbol:PnsL2 "Photosynthetic NDH subcomplex L 2"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009767 "photosynthetic
electron transport chain" evidence=IMP] [GO:0045156 "electron
transporter, transferring electrons within the cyclic electron
transport pathway of photosynthesis activity" evidence=IMP]
[GO:0009344 "nitrite reductase complex [NAD(P)H]" evidence=IMP]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR008797 Pfam:PF05757 EMBL:CP002684 GO:GO:0019898
GO:GO:0005509 GO:GO:0009535 EMBL:AC007576 GO:GO:0009767
GO:GO:0009543 UniGene:At.46769 UniGene:At.47475 InterPro:IPR023222
SUPFAM:SSF101112 GO:GO:0045156 GO:GO:0009344 GO:GO:0009654
EMBL:AF083742 EMBL:AF370579 EMBL:AY088325 EMBL:AK229642
IPI:IPI00535075 IPI:IPI00547468 PIR:A86275 RefSeq:NP_563937.1
RefSeq:NP_973820.1 ProteinModelPortal:Q9XI73 SMR:Q9XI73
STRING:Q9XI73 PRIDE:Q9XI73 EnsemblPlants:AT1G14150.1 GeneID:837974
KEGG:ath:AT1G14150 TAIR:At1g14150 eggNOG:NOG253837
HOGENOM:HOG000006297 InParanoid:Q9XI73 KO:K08901 OMA:SWRYVIF
PhylomeDB:Q9XI73 ProtClustDB:PLN02999 Genevestigator:Q9XI73
Uniprot:Q9XI73
Length = 190
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 97/164 (59%), Positives = 126/164 (76%)
Query: 37 QNPIPSRRNFVTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSP 96
Q I +RR +T+LI+ ++ IG ++ +++A E WGTRSF+KE++F PGLSP
Sbjct: 37 QQDIFTRRRTLTSLITFTV---------IGGATSSALA-QEKWGTRSFIKEKYFMPGLSP 86
Query: 97 EDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAFSTLPEVRRREYV 156
EDA ARIKQTAEG+ +REM+D M+WRYVIFYIRLKQAYLSQDL A + LPE RR +YV
Sbjct: 87 EDAAARIKQTAEGLRDMREMLDHMSWRYVIFYIRLKQAYLSQDLTNAMNILPESRRNDYV 146
Query: 157 NTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMFA 200
AN+L++NM+E D+YVRTPKVYESYLYYEK LK++D++V A
Sbjct: 147 QAANELVENMSELDFYVRTPKVYESYLYYEKTLKSIDNVVEFLA 190
>TAIR|locus:2127393 [details] [associations]
symbol:PSBQA "photosystem II subunit QA" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009637 "response to blue light" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] [GO:0010114 "response
to red light" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR008797 Pfam:PF05757 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161554 GO:GO:0019898 GO:GO:0005509
EMBL:AL021960 GO:GO:0009535 GO:GO:0031977 GO:GO:0015979
EMBL:AL031187 InterPro:IPR023222 SUPFAM:SSF101112 GO:GO:0009654
KO:K08901 EMBL:Y16847 EMBL:AY050328 EMBL:AY094048 EMBL:AY088330
IPI:IPI00532582 IPI:IPI00657124 PIR:T04959 RefSeq:NP_001031687.1
RefSeq:NP_193860.1 UniGene:At.24610 ProteinModelPortal:Q9XFT3
SMR:Q9XFT3 STRING:Q9XFT3 SWISS-2DPAGE:Q9XFT3 PaxDb:Q9XFT3
PRIDE:Q9XFT3 ProMEX:Q9XFT3 EnsemblPlants:AT4G21280.2 GeneID:827877
KEGG:ath:AT4G21280 TAIR:At4g21280 eggNOG:NOG313473
HOGENOM:HOG000029167 InParanoid:Q9XFT3 OMA:DRFYLQP PhylomeDB:Q9XFT3
ProtClustDB:CLSN2685363 BioCyc:MetaCyc:AT4G21280-MONOMER
Genevestigator:Q9XFT3 Uniprot:Q9XFT3
Length = 224
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 45 NFVTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSF---LKERFFEPGLSPEDAVA 101
+FV +++ ++++ G S G S R F LK+RF+ L P +A A
Sbjct: 68 SFVQAVLADAISIKV--GPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAA 125
Query: 102 RIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAFSTLPEVRRREYVNTAND 161
R K++A+ + +++ ++DR AW YV +R K +YL DL T S+ P+ ++ +
Sbjct: 126 RAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTK 185
Query: 162 LIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVA 197
L D + DY + ++ YY + + L++++A
Sbjct: 186 LFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLA 221
>TAIR|locus:2115703 [details] [associations]
symbol:PSBQ-2 "photosystem II subunit Q-2" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA;RCA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0048046 "apoplast" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0070838
"divalent metal ion transport" evidence=RCA] InterPro:IPR008797
Pfam:PF05757 GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0019898 GO:GO:0048046 GO:GO:0005509 EMBL:AL161503
GO:GO:0009535 GO:GO:0031977 GO:GO:0015979 InterPro:IPR023222
SUPFAM:SSF101112 GO:GO:0009654 KO:K08901 eggNOG:NOG313473
HOGENOM:HOG000029167 ProtClustDB:CLSN2685363 EMBL:AF372897
EMBL:BT000648 EMBL:AY088008 EMBL:Z17777 IPI:IPI00548616 PIR:B85065
RefSeq:NP_192427.1 UniGene:At.21853 ProteinModelPortal:Q41932
SMR:Q41932 IntAct:Q41932 STRING:Q41932 PaxDb:Q41932 PRIDE:Q41932
ProMEX:Q41932 EnsemblPlants:AT4G05180.1 GeneID:825866
KEGG:ath:AT4G05180 TAIR:At4g05180 InParanoid:Q41932 OMA:YAARSKS
PhylomeDB:Q41932 Genevestigator:Q41932 GermOnline:AT4G05180
Uniprot:Q41932
Length = 230
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 34/113 (30%), Positives = 63/113 (55%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
LK+RF+ LSP +A AR K +A+ + +++ +D+ AW YV +RL+ +YL DL T
Sbjct: 115 LKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVI 174
Query: 145 STLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVA 197
S P+ ++ + L + DY R+ ++ YY + + +L++++A
Sbjct: 175 SAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLA 227
>UNIPROTKB|P83646 [details] [associations]
symbol:OsI_025465 "Oxygen-evolving enhancer protein 3,
chloroplastic" species:39946 "Oryza sativa Indica Group"
[GO:0009536 "plastid" evidence=IC] InterPro:IPR008797 Pfam:PF05757
GO:GO:0009536 GO:GO:0009570 GO:GO:0019898 GO:GO:0048046
GO:GO:0005509 GO:GO:0009535 GO:GO:0015979 EMBL:CM000132
GO:GO:0009543 InterPro:IPR023222 SUPFAM:SSF101112 GO:GO:0009654
eggNOG:NOG313473 HOGENOM:HOG000029167 ProteinModelPortal:P83646
SMR:P83646 STRING:P83646 PRIDE:P83646 KEGG:dosa:Os07t0544800-01
Gramene:P83646 Uniprot:P83646
Length = 217
Score = 145 (56.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 31/113 (27%), Positives = 60/113 (53%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
L+ERF+ L P +A AR K++A+ + +L+ ++++ W +V +RL+ +YL DLKT
Sbjct: 102 LRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVI 161
Query: 145 STLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVA 197
++ P+ ++ + L + D+ + E+ YY L D++A
Sbjct: 162 NSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLA 214
Score = 41 (19.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 56 ALVGLHGDGIGSSSGASVALAES 78
A++GL GI + A ALAE+
Sbjct: 48 AVLGLVATGIAGGALAQAALAEA 70
>TAIR|locus:2096707 [details] [associations]
symbol:PnsL3 "Photosynthetic NDH subcomplex L 3"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;TAS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0019684
"photosynthesis, light reaction" evidence=TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009767 "photosynthetic
electron transport chain" evidence=IMP] [GO:0045156 "electron
transporter, transferring electrons within the cyclic electron
transport pathway of photosynthesis activity" evidence=IMP]
[GO:0009344 "nitrite reductase complex [NAD(P)H]" evidence=IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0019252
"starch biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR008797
Pfam:PF05757 EMBL:CP002686 GO:GO:0019898 GO:GO:0005509
GO:GO:0009535 GO:GO:0009767 InterPro:IPR023222 SUPFAM:SSF101112
EMBL:AC010870 GO:GO:0045156 GO:GO:0009344 GO:GO:0009654 KO:K08901
EMBL:AY070745 EMBL:AY093737 EMBL:AY085184 IPI:IPI00520793
RefSeq:NP_566137.1 UniGene:At.28336 ProteinModelPortal:Q9SGH4
SMR:Q9SGH4 IntAct:Q9SGH4 STRING:Q9SGH4 PRIDE:Q9SGH4
EnsemblPlants:AT3G01440.1 GeneID:821143 KEGG:ath:AT3G01440
TAIR:At3g01440 eggNOG:NOG287651 HOGENOM:HOG000242094
InParanoid:Q9SGH4 OMA:FMYYDFD PhylomeDB:Q9SGH4 ProtClustDB:PLN02729
Genevestigator:Q9SGH4 Uniprot:Q9SGH4
Length = 220
Score = 117 (46.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/124 (22%), Positives = 57/124 (45%)
Query: 77 ESWGTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYL 136
E GTR+F+K+ + + + + R+K+ A + ++ +++ YV Y+RLK +L
Sbjct: 97 EKTGTRTFIKKGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFL 156
Query: 137 SQDLKTAFSTLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIV 196
D S ++ + AN L DN + + +T + E+ Y+ L +++
Sbjct: 157 FYDFDNLISAAASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVM 216
Query: 197 AMFA 200
A
Sbjct: 217 TRMA 220
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 200 200 0.00087 111 3 11 22 0.48 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 578 (61 KB)
Total size of DFA: 153 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.26u 0.08s 21.34t Elapsed: 00:00:02
Total cpu time: 21.26u 0.08s 21.34t Elapsed: 00:00:02
Start: Fri May 10 04:08:50 2013 End: Fri May 10 04:08:52 2013