BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029051
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XI73|PQL1_ARATH PsbQ-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PQL1
PE=1 SV=1
Length = 190
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/164 (59%), Positives = 126/164 (76%), Gaps = 10/164 (6%)
Query: 37 QNPIPSRRNFVTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSP 96
Q I +RR +T+LI+ ++ IG ++ +++A E WGTRSF+KE++F PGLSP
Sbjct: 37 QQDIFTRRRTLTSLITFTV---------IGGATSSALA-QEKWGTRSFIKEKYFMPGLSP 86
Query: 97 EDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAFSTLPEVRRREYV 156
EDA ARIKQTAEG+ +REM+D M+WRYVIFYIRLKQAYLSQDL A + LPE RR +YV
Sbjct: 87 EDAAARIKQTAEGLRDMREMLDHMSWRYVIFYIRLKQAYLSQDLTNAMNILPESRRNDYV 146
Query: 157 NTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMFA 200
AN+L++NM+E D+YVRTPKVYESYLYYEK LK++D++V A
Sbjct: 147 QAANELVENMSELDFYVRTPKVYESYLYYEKTLKSIDNVVEFLA 190
>sp|Q41806|PSBQ2_MAIZE Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays
GN=PSBQ2 PE=3 SV=1
Length = 213
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 81 TRSF---LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLS 137
TR F LKERF+ L P +AVAR+K +A+ + +L+ ++D+ AW YV +RL+ +YL
Sbjct: 91 TRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLR 150
Query: 138 QDLKTAFSTLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVA 197
DLKT ++ P+ ++ L + + D+ + E+ Y+ L D++A
Sbjct: 151 YDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLA 210
Query: 198 MFA 200
Sbjct: 211 KLG 213
>sp|Q9XFT3|PSBQ1_ARATH Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis
thaliana GN=PSBQ1 PE=1 SV=3
Length = 224
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
LK+RF+ L P +A AR K++A+ + +++ ++DR AW YV +R K +YL DL T
Sbjct: 109 LKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTII 168
Query: 145 STLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMFA 200
S+ P+ ++ + L D + DY + ++ YY + + L++++A
Sbjct: 169 SSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224
>sp|Q41932|PSBQ2_ARATH Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis
thaliana GN=PSBQ2 PE=1 SV=2
Length = 230
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
LK+RF+ LSP +A AR K +A+ + +++ +D+ AW YV +RL+ +YL DL T
Sbjct: 115 LKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVI 174
Query: 145 STLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMFA 200
S P+ ++ + L + DY R+ ++ YY + + +L++++A
Sbjct: 175 SAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230
>sp|Q41048|PSBQ1_MAIZE Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays
GN=PSBQ1 PE=2 SV=1
Length = 217
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
LKERF+ L P +A AR+K +A+ + +L+ ++D+ AW YV +RL+ +YL DLKT
Sbjct: 102 LKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVI 161
Query: 145 STLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMFA 200
++ P+ ++ L + + D+ + E+ Y+ L D++A
Sbjct: 162 ASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLG 217
>sp|P12301|PSBQ_SPIOL Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia
oleracea GN=PSBQ PE=1 SV=1
Length = 232
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 63/121 (52%)
Query: 80 GTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQD 139
GT + K+RF+ L P +A R K +A + ++++ +DR AW + +RL+ +YL D
Sbjct: 112 GTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYD 171
Query: 140 LKTAFSTLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMF 199
LKT S P+ ++ + L ++ D+ + E+ YY + + N+++++A
Sbjct: 172 LKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKL 231
Query: 200 A 200
Sbjct: 232 G 232
>sp|Q0D5P8|PSBQ_ORYSJ Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa
subsp. japonica GN=Os07g0544800 PE=2 SV=1
Length = 217
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
L+ERF+ L P +A AR K++A+ + +L+ ++++ W +V +RL+ +YL DLKT
Sbjct: 102 LRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVI 161
Query: 145 STLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMFA 200
++ P+ ++ + L + D+ + E+ YY L D++A
Sbjct: 162 NSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217
>sp|P83646|PSBQ_ORYSI Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_025465 PE=1 SV=2
Length = 217
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
L+ERF+ L P +A AR K++A+ + +L+ ++++ W +V +RL+ +YL DLKT
Sbjct: 102 LRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVI 161
Query: 145 STLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVAMFA 200
++ P+ ++ + L + D+ + E+ YY L D++A
Sbjct: 162 NSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217
>sp|O22591|PSBQ_ONOVI Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis
viciifolia GN=PSBQ PE=2 SV=1
Length = 231
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 85 LKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAF 144
LKERF+ LSP +A R +++A+ + ++++ +D+ I +RL+ +YL DL T
Sbjct: 115 LKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVI 174
Query: 145 STLPEVRRREYV-NTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDIVA 197
S+ P+ +++ ++A L ++ DY + ++ YY A+ L+D+++
Sbjct: 175 SSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLS 228
>sp|Q9SGH4|PQL2_ARATH PsbQ-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=PQL2
PE=1 SV=1
Length = 220
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 77 ESWGTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYL 136
E GTR+F+K+ + + + + R+K+ A + ++ +++ YV Y+RLK +L
Sbjct: 97 EKTGTRTFIKKGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFL 156
Query: 137 SQDLKTAFSTLPEVRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYE 186
D S ++ + AN L DN + + +T + E+ Y+
Sbjct: 157 FYDFDNLISAAASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYK 206
>sp|P08395|SPPA_ECOLI Protease 4 OS=Escherichia coli (strain K12) GN=sppA PE=1 SV=2
Length = 618
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 36/144 (25%)
Query: 47 VTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSPEDAVAR-IKQ 105
V T + SL +G+H DG+ +S A V++ TR+ E LS E+ R I
Sbjct: 437 VITTVENSLDSIGVHTDGVSTSPLADVSI-----TRALPPEAQLMMQLSIENGYKRFITL 491
Query: 106 TAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAFSTLPEVRRREYVNTANDLIDN 165
A+ HS E +D++A +V + QD K AN L+D+
Sbjct: 492 VADARHSTPEQIDKIAQGHV---------WTGQDAK-----------------ANGLVDS 525
Query: 166 MAEFDYYV----RTPKVYESYLYY 185
+ +FD V KV + +L Y
Sbjct: 526 LGDFDDAVAKAAELAKVKQWHLEY 549
>sp|P0C656|MED12_CAEBR Mediator of RNA polymerase II transcription subunit 12
OS=Caenorhabditis briggsae GN=dpy-22 PE=3 SV=2
Length = 3902
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 102 RIKQTA-EGMHSLREMVDRMAWRYVIFYIRLKQAYLSQDLKTAFSTLPEVRRREYVNTAN 160
++K A + M ++ + + + W++ +F L + +P E+ N
Sbjct: 2382 KVKTNAYDHMKNIPDGIQKGGWKFRMFQTTRLDKVAKSALHQLRAKIPHTHIGEFKRPCN 2441
Query: 161 DLIDNMAEFDYYVRTPKV 178
++DNM+E D+Y+R P+V
Sbjct: 2442 IMLDNMSE-DFYLRPPEV 2458
>sp|A1A5H6|CNOT1_DANRE CCR4-NOT transcription complex subunit 1 OS=Danio rerio GN=cnot1
PE=2 SV=1
Length = 2374
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 1 MNSSSFSKATSLLQAHNVTNNHNPKTSLPEIKPKATQNPIPSRRNFVTTLISTSLALVGL 60
+ S+FS S +A + N NP T+ P I P ++Q P +STSL+
Sbjct: 739 LQGSAFSNPQSPAKAFSNLPNPNPSTAFPGINPLSSQLQGP---------LSTSLS---- 785
Query: 61 HGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSP 96
GIGS G ++ + R + PGL+P
Sbjct: 786 ---GIGSGLGMPTVSSDVFSAR-----KMSTPGLNP 813
>sp|Q87Q54|TPMT_VIBPA Thiopurine S-methyltransferase OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=tpm PE=3 SV=1
Length = 216
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 80 GTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQD 139
RSF E F+ P ++P GMH L + + + F + QA + D
Sbjct: 72 AVRSFFAEHFYTPTVTP----------ISGMHELYQFDELSIYTGDFFTAPVSQADIVYD 121
Query: 140 LKTAFSTLPEVRRREYVNTANDLID 164
+ A LP+ R EYV L++
Sbjct: 122 -RAALVALPQDMREEYVARLKQLLN 145
>sp|A6V7H8|GPDA_PSEA7 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Pseudomonas
aeruginosa (strain PA7) GN=gpsA PE=3 SV=1
Length = 340
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 46 FVTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSPEDAVARIKQ 105
F L + + +GL G G + S +R++ GLS E AV+R+ +
Sbjct: 225 FAVKLGANPMTFLGLAG------VGDLIVTCSSPKSRNYQVGHALGEGLSLEQAVSRLGE 278
Query: 106 TAEGMHSLREMVDR 119
TAEG+++LR + ++
Sbjct: 279 TAEGVNTLRVLKEK 292
>sp|Q6GZW7|RPB1_FRG3G Putative DNA-directed RNA polymerase 008R OS=Frog virus 3 (isolate
Goorha) GN=FV3-008R PE=3 SV=1
Length = 1293
Score = 31.2 bits (69), Expect = 4.6, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 18/93 (19%)
Query: 79 WGTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQ 138
+ +R F++ F + GL+P + K EGM S +M V Y K L++
Sbjct: 760 YESRGFVRSSFLK-GLNPREVFFHAKSGREGMISTSQMTG------VTGYAERKMVKLNE 812
Query: 139 DLKTAFSTLPEVRRREYVNTANDLIDNMAEFDY 171
DL +A Y T D + N+ +F Y
Sbjct: 813 DLVSA-----------YDGTVRDAMGNVVQFVY 834
>sp|Q2V4B2|PQL3_ARATH PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=PQL3
PE=2 SV=1
Length = 187
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 91 EPGLSPEDAVARIKQTAEGMHSLRE-MVDRMAWRYVIFYIRLKQAYLSQDLKTAFSTLPE 149
EP + E A +++ AE + ++E M+++ W+ +R + + QD P
Sbjct: 78 EPERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPP 137
Query: 150 VRRREYVNTANDLIDNMAEFDYYVRTPKVYESYLYYEKALKNLDDI 195
R + + + L +++ + DY R + YY + LDDI
Sbjct: 138 KDRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDI 183
>sp|Q9I3A8|GPDA_PSEAE Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 46 FVTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSPEDAVARIKQ 105
F L + + +GL G G + S +R++ GLS E+AV+R+ +
Sbjct: 225 FAVKLGANPMTFLGLAG------VGDLIVTCSSPKSRNYQVGHALGEGLSLEEAVSRMGE 278
Query: 106 TAEGMHSLREMVDR 119
TAEG+++L+ + ++
Sbjct: 279 TAEGVNTLKVLKEK 292
>sp|Q02K99|GPDA_PSEAB Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 46 FVTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSPEDAVARIKQ 105
F L + + +GL G G + S +R++ GLS E+AV+R+ +
Sbjct: 225 FAVKLGANPMTFLGLAG------VGDLIVTCSSPKSRNYQVGHALGEGLSLEEAVSRMGE 278
Query: 106 TAEGMHSLREMVDR 119
TAEG+++L+ + ++
Sbjct: 279 TAEGVNTLKVLKEK 292
>sp|A7MVH9|TPMT_VIBHB Thiopurine S-methyltransferase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=tpm PE=3 SV=1
Length = 216
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 80 GTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYIRLKQAYLSQD 139
R+F E F+ P ++P GMH L + + + F + +A + D
Sbjct: 72 AVRAFFAEHFYTPTVTP----------VNGMHELYQFDELSIYTGDFFTAPVSKADIIYD 121
Query: 140 LKTAFSTLPEVRRREYVNTANDLID 164
+ A LP+ R EY N L++
Sbjct: 122 -RAALVALPKEMREEYANRVKQLLN 145
>sp|B7UVA7|GPDA_PSEA8 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Pseudomonas
aeruginosa (strain LESB58) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 46 FVTTLISTSLALVGLHGDGIGSSSGASVALAESWGTRSFLKERFFEPGLSPEDAVARIKQ 105
F L + + +GL G G + S +R++ GLS E+AV+R+ +
Sbjct: 225 FAVKLGANPMTFLGLAG------VGDLIVTCSSPKSRNYQVGHALGEGLSLEEAVSRMGE 278
Query: 106 TAEGMHSLREMVDR 119
TAEG+++L+ + ++
Sbjct: 279 TAEGVNTLKVLKEK 292
>sp|Q7MK46|TPMT_VIBVY Thiopurine S-methyltransferase OS=Vibrio vulnificus (strain YJ016)
GN=tpm PE=3 SV=1
Length = 217
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 70 GASVALAESWGTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYI 129
GA ++L RSF E F+ P ++P G H L + + + F
Sbjct: 65 GAELSLI---AVRSFFAEHFYTPTVTP----------ISGQHELYQFDELSIYAGDFFTA 111
Query: 130 RLKQAYLSQDLKTAFSTLPEVRRREYVNTANDLID 164
L +A L D + A LPE R EYV L++
Sbjct: 112 PLSKADLIYD-RAALIALPEEMRVEYVQRIRGLLN 145
>sp|Q8DA33|TPMT_VIBVU Thiopurine S-methyltransferase OS=Vibrio vulnificus (strain CMCP6)
GN=tpm PE=3 SV=1
Length = 217
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 70 GASVALAESWGTRSFLKERFFEPGLSPEDAVARIKQTAEGMHSLREMVDRMAWRYVIFYI 129
GA ++L RSF E F+ P ++P G H L + + + F
Sbjct: 65 GAELSLI---AVRSFFAEHFYTPTVTP----------ISGQHELYQFDELSIYAGDFFTA 111
Query: 130 RLKQAYLSQDLKTAFSTLPEVRRREYVNTANDLID 164
L +A L D + A LPE R EYV L++
Sbjct: 112 PLSKADLIYD-RAALIALPEEMRVEYVQRIRGLLN 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,038,826
Number of Sequences: 539616
Number of extensions: 2769807
Number of successful extensions: 8208
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 8190
Number of HSP's gapped (non-prelim): 34
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)