BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029054
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LMP7|GOS11_ARATH Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana
GN=GOS11 PE=2 SV=1
Length = 223
Score = 343 bits (880), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/200 (83%), Positives = 183/200 (91%), Gaps = 1/200 (0%)
Query: 1 MHSYRKLVSSKGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRH 60
MHSYR+LVS+K +K D E+DLE+GID LL+QLQQVN QMQ WVSSGGSEMVSHTLTRH
Sbjct: 25 MHSYRRLVSTKALSKSDGNESDLEAGIDLLLRQLQQVNAQMQAWVSSGGSEMVSHTLTRH 84
Query: 61 QEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASIN 120
QEILQDLTQEFYR RSSL+AKQEHASLLEDFREFDRTRLDLEDG GS EQAL+KEH IN
Sbjct: 85 QEILQDLTQEFYRHRSSLRAKQEHASLLEDFREFDRTRLDLEDGYGS-EQALIKEHMGIN 143
Query: 121 RSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTI 180
R+T QMD VISQAQATLG LVFQRSTFGGINSKLSNV+SRLP+VN IL++IKRKKSMDTI
Sbjct: 144 RNTAQMDGVISQAQATLGTLVFQRSTFGGINSKLSNVASRLPTVNTILAAIKRKKSMDTI 203
Query: 181 ILALVASVCTFLIFIYWVTK 200
IL+LVA+VCTFLIFIYW+TK
Sbjct: 204 ILSLVAAVCTFLIFIYWITK 223
>sp|O22151|GOS12_ARATH Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana
GN=GOS12 PE=1 SV=2
Length = 257
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 20/202 (9%)
Query: 13 STKVDAAENDLESGIDW---------LLKQLQQVNIQMQDWVSSGG-SEMVSHTLTRHQE 62
S VD + SG W LL++L +N M +S + V+ L RH++
Sbjct: 62 SGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRD 121
Query: 63 ILQDLTQEFYRLRSSLKAKQEHASLL----EDFREFDRTRLDLEDGVGSPEQALLKEHAS 118
IL + TQEF R++ ++ + +EHA LL +D E+ + G SP +L+E AS
Sbjct: 122 ILHEYTQEFRRIKGNINSLREHAELLSSVRDDISEYKAS------GSMSPGVQVLRERAS 175
Query: 119 INRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMD 178
I+ S +D VI QAQAT L QRS F + K+ N+ + P + +L SIKRK+S D
Sbjct: 176 IHGSISHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRD 235
Query: 179 TIILALVASVCTFLIFIYWVTK 200
T+IL+ V + CT + IYW++K
Sbjct: 236 TLILSAVIAACTLFLIIYWLSK 257
>sp|Q2TBU3|GOSR1_BOVIN Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2
SV=1
Length = 250
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 16/180 (8%)
Query: 27 IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQ 82
I+ LL +L +N +M ++ SS G + + HTL RH++ILQD T EF++ +++ A +
Sbjct: 74 IEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFVAIR 133
Query: 83 EHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVISQAQAT 136
E +L+ R+ D+E GV + L LKEH + S ++ IS A AT
Sbjct: 134 ERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
Query: 137 LGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIY 196
+ QR I SK++ +++R P+VN ++ I +K D++IL V VCT L+ +Y
Sbjct: 188 KENMTSQRGMLKSIQSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGVCTILLLLY 247
>sp|O95249|GOSR1_HUMAN Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1
SV=1
Length = 250
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 16/180 (8%)
Query: 27 IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQ 82
I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +
Sbjct: 74 IEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIR 133
Query: 83 EHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVISQAQAT 136
E +L+ R+ D+E GV + L LKEH + S ++ IS A AT
Sbjct: 134 ERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
Query: 137 LGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIY 196
+ QR I+SK++ +++R P+VN ++ I +K D++IL V +CT L+ +Y
Sbjct: 188 KENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>sp|O08522|GOSR1_CRIGR Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1
PE=1 SV=1
Length = 250
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 16/180 (8%)
Query: 27 IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQ 82
I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +
Sbjct: 74 IEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIR 133
Query: 83 EHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVISQAQAT 136
E +L+ R+ D+E GV + L LKEH + S ++ IS A AT
Sbjct: 134 ERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
Query: 137 LGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIY 196
+ QR I+SK++ +++R P+VN ++ I +K D++IL V +CT L+ +Y
Sbjct: 188 KENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>sp|O88630|GOSR1_MOUSE Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1
SV=2
Length = 250
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 16/180 (8%)
Query: 27 IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQ 82
I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++ A +
Sbjct: 74 IEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFTAIR 133
Query: 83 EHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVISQAQAT 136
E +L+ R+ D+E GV + L LKEH + S ++ IS A AT
Sbjct: 134 ERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
Query: 137 LGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIY 196
+ QR I+SK++ +++R P+VN ++ I +K D++IL V +CT L+ +Y
Sbjct: 188 KENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>sp|Q62931|GOSR1_RAT Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1
PE=1 SV=1
Length = 250
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 16/180 (8%)
Query: 27 IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQ 82
I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++ A +
Sbjct: 74 IEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIR 133
Query: 83 EHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVISQAQAT 136
E +L+ R+ D+E GV + L LKEH + S ++ IS A AT
Sbjct: 134 ERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
Query: 137 LGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIY 196
+ QR I+SK++ +++R P+VN ++ I +K D++IL V +CT L+ +Y
Sbjct: 188 KENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247
>sp|Q5RBL6|GOSR1_PONAB Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2
SV=1
Length = 248
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 99/180 (55%), Gaps = 16/180 (8%)
Query: 27 IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQ 82
I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ + +
Sbjct: 72 IEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMSIR 131
Query: 83 EHASLLEDFREFDRTRLDLED-----GVGSPEQAL-LKEHASINRSTGQMDSVISQAQAT 136
E +L+ R+ D+E GV + L LKEH + S ++ IS A AT
Sbjct: 132 ERENLMGSVRK------DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 185
Query: 137 LGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIFIY 196
+ QR I+SK++ +++R P+VN ++ I +K D++IL V +CT L+ +Y
Sbjct: 186 KENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 245
>sp|Q95ZW1|GOSR1_CAEEL Golgi SNAP receptor complex member 1 OS=Caenorhabditis elegans
GN=gos-28 PE=2 SV=1
Length = 234
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 27 IDWLLKQLQQVNIQMQDWVSS------GGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKA 80
I+ L++QL +N M D + + + HTL RH+EIL+D E+ R R ++
Sbjct: 58 IEGLIEQLTNINDDMNDVAGAQSSASWANNPAIQHTLRRHREILRDYGSEYRRARDNVDQ 117
Query: 81 KQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQATLGAL 140
+ LL E +R L + + LKE+ IN +D + A +T +
Sbjct: 118 VLQRELLLSSSNE-NRNNPILNNRARGYDM-YLKENDHINACDRLLDEQLEMAMSTKENM 175
Query: 141 VFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIF-IYWV 198
Q GI+++L ++S + P++N ++ IK KK +T+ILA V S C LIF I+W+
Sbjct: 176 ARQGINLRGISTRLHHISKKYPAINNLMQKIKTKKQKNTLILAAVISSC--LIFTIFWI 232
>sp|Q9VE50|GOSR1_DROME Golgi SNAP receptor complex member 1 OS=Drosophila melanogaster
GN=Gos28 PE=2 SV=1
Length = 232
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 21 NDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKA 80
+ L I+ +L++L +N M D +SG + M HTL RH+EILQ QEF ++ ++
Sbjct: 57 DSLSEEIEQMLEKLSSLNESMSDLPASGAAAM--HTLQRHREILQGYRQEFNKICANHTM 114
Query: 81 KQEHASLLEDFREFDRTRLDLEDGVGSP-------EQALLKEHASINRSTGQMDSVISQA 133
+ E LL L GSP + LKE +N ++ ++ I+ A
Sbjct: 115 RIEREELLRGS--------GLATSSGSPSISGLNRREMYLKESGHLNSASHLVNDQINIA 166
Query: 134 QATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLI 193
T L QR F + ++ +++S+R P ++ ++ I KK D++IL V C L+
Sbjct: 167 IETRDHLHAQRQAFKRLQTRFNDISNRFPLISSLIQRINIKKRRDSLILGAVIGFCVILL 226
Query: 194 FIY 196
+Y
Sbjct: 227 LLY 229
>sp|A8XLW0|GOSR1_CAEBR Golgi SNAP receptor complex member 1 OS=Caenorhabditis briggsae
GN=gos-28 PE=3 SV=1
Length = 234
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 27 IDWLLKQLQQVNIQMQD---------WVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSS 77
I+ L++QL +N M D W S+ + HTL RH+EIL+D E+ R R +
Sbjct: 58 IEGLIEQLTNINDDMNDVAGAQSSASWASNPA---IQHTLRRHREILRDYGSEYRRARDN 114
Query: 78 LKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQATL 137
+ + LL + +R + LKE+ IN +D I A +T
Sbjct: 115 VDQVLQRELLLSSSN--NESRNPAVNNRARGYDMYLKENDHINACDRLLDEQIEMAMSTK 172
Query: 138 GALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTIILALVASVCTFLIF-IY 196
+ Q GI+++L ++ + P++N ++ IK KK +T+ILA V S C LIF I+
Sbjct: 173 ENVARQGINLRGISNRLHYITKKYPAINNLMQKIKTKKQKNTMILAGVISAC--LIFTIF 230
Query: 197 WV 198
W+
Sbjct: 231 WI 232
>sp|P38736|GOSR1_YEAST Golgi SNAP receptor complex member 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GOS1 PE=1 SV=1
Length = 223
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 57 LTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFR-EFDRTRLDLEDGVGSPEQALLKE 115
L RH+EILQD + F +RSS++ ++ +LL + + + D +G ++ + E
Sbjct: 82 LHRHKEILQDHWKSFRNIRSSIQQERNRLNLLFSVKNDIANSTTDAPAPIGDADEYIQNE 141
Query: 116 HASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKK 175
I++S +D +ISQA T Q + N+K+ R+P VNQ++ I ++
Sbjct: 142 TRRIDQSNNVVDRLISQAWETRSQFHSQSNVLNTANNKVLQTLQRIPGVNQLIMKINTRR 201
Query: 176 SMDTIILALVASVCTFLIFIYW 197
+ +LA + ++C +F W
Sbjct: 202 KKNAFVLATITTLCILFLFFTW 223
>sp|Q09835|GOS1_SCHPO Protein transport protein gos1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gos1 PE=3 SV=1
Length = 182
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 98 RLDLEDGVGSPEQAL-------LKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGI 150
+ D + V SPE+ ++E S++ S + ++ +A AT +Q S G +
Sbjct: 76 KYDAKQEVLSPEELRDAQNFLEMQEANSLDNSIRGTNELLERAYATREDFDYQNSVLGNV 135
Query: 151 NSKLSNVSSRLPSVNQIL--SSIKRKKSMDTIILALVASVCTFLIFIYW 197
++++ + +P +NQIL +SI+R++ D+IILAL+ SV L+F+++
Sbjct: 136 TNRINGAAMSIPFINQILRKTSIRRRR--DSIILALLISVL-MLLFLFF 181
>sp|Q9P7G5|BOS1_SCHPO Protein transport protein bos1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bos1 PE=3 SV=1
Length = 235
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 107 SPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQ 166
S + LLKEH + R+ Q+D + + + LG LV Q S +K+ N ++ L
Sbjct: 141 SRQDGLLKEHDFLGRAESQVDEFLERGRMILGDLVEQGSVLKATKTKVLNAANTLGITRH 200
Query: 167 ILSSIKRKKSMDTIILALVASVCTFLIFIYW 197
LS I R+ D II A FL+F+ +
Sbjct: 201 TLSLINRRSKQDKIIFYCGA----FLVFVLF 227
>sp|Q6BZQ6|BOS1_YARLI Protein transport protein BOS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BOS1 PE=3 SV=1
Length = 226
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 57 LTRHQEILQDLTQEFYRLRSSLKAK--QEHASLLEDFREF--DRTRLDLEDGVGSP---- 108
L R +E L D EF LRS+ + K +E+ + L + R R D P
Sbjct: 71 LARFREELADARSEFKNLRSAREEKTLEENKTALFGDNPYGESRNRNVNRDVPIQPTYTD 130
Query: 109 ---EQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVN 165
E+ + +E +S+N+ Q+DS I Q A LG L Q K+ +V+ L
Sbjct: 131 LTREEGMQREQSSLNQVGQQLDSFIEQGMAALGDLQEQSDILRSTGKKMRSVAETLGLSR 190
Query: 166 QILSSIKRKKSMDTIILALVASVCTFLIFIYWVTK 200
+ + ++++ D + L+ Y++ K
Sbjct: 191 ETIKMVEKRARQDKRF--FYGGIVFMLVCFYYILK 223
>sp|P41941|GOSR2_CAEEL Probable Golgi SNAP receptor complex member 2 OS=Caenorhabditis
elegans GN=gosr-2.1 PE=3 SV=1
Length = 213
Score = 37.0 bits (84), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 122 STGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSSIKRKKSMDTII 181
S +D +ISQ A L L Q G+ K+ + L N L I R+ D I+
Sbjct: 133 SHTHLDDLISQGSAVLENLKSQHLNLRGVGRKMHEIGQALGLSNSTLQVIDRRVREDWIL 192
Query: 182 LALVASVCTFLIFIYW 197
+ VC ++ ++
Sbjct: 193 FVIGCIVCCIFMYAFY 208
>sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo
sapiens GN=MACF1 PE=1 SV=4
Length = 7388
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 18 AAENDLESGIDWLLKQLQQVNIQMQD----------WVSSGGSEMVSHTLTRHQEILQDL 67
A+ N + I +Q+Q++N++M+D V+ S + L +HQ+ +Q+L
Sbjct: 4245 ASGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLCQHQDRVQNL 4304
Query: 68 TQEFYRLRSSLKAKQEHAS----LLEDFREFDRT 97
++F L+ ++K +++ AS L++FR+ RT
Sbjct: 4305 RKDFTELQKTVKEREKDASSCQEQLDEFRKLVRT 4338
>sp|Q57675|VATI_METJA V-type ATP synthase subunit I OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpI PE=3 SV=1
Length = 695
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 77 SLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASINRSTGQMDSVISQAQA 135
+LK K E ++L + R+F+ R D+ D G+P +AL K + + + +S+I + +A
Sbjct: 217 TLKEKLE--NVLSEIRKFEFERYDISDVEGTPSEALSKIESELKAIESERNSLIEKLKA 273
>sp|P25385|BOS1_YEAST Protein transport protein BOS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BOS1 PE=1 SV=1
Length = 244
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 103 DGVGSP-EQALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRL 161
+G G P Q L KE + R Q+D ++ Q + +V Q + ++SN L
Sbjct: 145 NGGGLPLYQGLQKEQSVFERGNAQLDYILEMGQQSFENIVEQNKILSKVQDRMSNGLRTL 204
Query: 162 PSVNQILSSIKRKKSMDTIIL 182
Q ++SI ++ D ++
Sbjct: 205 GVSEQTITSINKRVFKDKLVF 225
>sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4
Length = 1979
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 22 DLESGID-------WLLKQLQQVNIQMQDWV-----SSGGSEMVSHTLTRHQEILQDLTQ 69
DLES +D +KQL+++ QM+D+ + E + T +++ ++L
Sbjct: 1634 DLESQVDSANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEA 1693
Query: 70 EFYRLRSSLKAKQ--------EHASLLEDFREFDRTRLDLEDG-------VGSPEQALLK 114
E +L+ L A + E + E+ + R L+D + E+ L +
Sbjct: 1694 ELIQLQEDLAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDE 1753
Query: 115 EHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSS 170
EH++I + +M + QA+ L +R+T K N +L N+ L S
Sbjct: 1754 EHSNIETMSDRMRKAVQQAEQLNNELATERATA----QKNENARQQLERQNKELRS 1805
>sp|O54761|ALMS_SPETR Alpha-1-antitrypsin-like protein GS55-MS OS=Spermophilus
tridecemlineatus PE=2 SV=1
Length = 413
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 3 SYRKLVSSKGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQE 62
++ +++ G + AE+D+ G LL+ L + N Q+Q +++G + H L +
Sbjct: 91 THTQIMEGLGFNLTETAESDIHQGFQHLLQTLNKPNSQLQ--LTTGNGLFIDHNLKLLDK 148
Query: 63 ILQDLTQEFY 72
LQD+ ++
Sbjct: 149 FLQDVKNLYH 158
>sp|Q5R7Y0|BAI2_PONAB Brain-specific angiogenesis inhibitor 2 OS=Pongo abelii GN=BAI2 PE=2
SV=2
Length = 1485
Score = 32.0 bits (71), Expect = 2.9, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 51 EMVSHTLTRHQEILQDLTQEFY---RLRSSLKAKQE 83
E V HT RH E+ +L Q+F+ R RS AK+E
Sbjct: 1372 EKVMHTRKRHSELYHELNQKFHTFDRYRSQSTAKRE 1407
>sp|O60241|BAI2_HUMAN Brain-specific angiogenesis inhibitor 2 OS=Homo sapiens GN=BAI2 PE=2
SV=2
Length = 1585
Score = 32.0 bits (71), Expect = 2.9, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 51 EMVSHTLTRHQEILQDLTQEFY---RLRSSLKAKQE 83
E V HT RH E+ +L Q+F+ R RS AK+E
Sbjct: 1472 EKVMHTRKRHSELYHELNQKFHTFDRYRSQSTAKRE 1507
>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1
PE=1 SV=1
Length = 1391
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 54 SHTLTRHQEILQDLTQEFYRLRSSLKAKQE-HASLLEDFREFDRTRLDLEDGVGSPEQAL 112
S T T+H+EILQ+L + LKA QE + L++D E +T+ D + E A+
Sbjct: 987 SETKTKHEEILQNLQKMLADTEDKLKAAQEANRDLMQDMEEL-KTQADKAKAAQTAEDAM 1045
>sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1
PE=1 SV=2
Length = 1438
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 53 VSHTLTRHQEILQDLTQEFYRLRSSLK-AKQEHASLLEDFREFDRTRLDLEDGVGSPEQA 111
S T T+H+EILQ+L + LK A++E++ LL++ E R + D + E A
Sbjct: 1033 TSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEEL-RKQADKAKAAQTAEDA 1091
Query: 112 L 112
+
Sbjct: 1092 M 1092
>sp|Q00547|HMMR_MOUSE Hyaluronan mediated motility receptor OS=Mus musculus GN=Hmmr PE=1
SV=4
Length = 794
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%)
Query: 111 ALLKEHASINRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNQILSS 170
ALL+E + ++ M+S + + +A L A V ++++ N+ L + L N++L +
Sbjct: 94 ALLQERGTQDKRIQDMESELEKTEAKLNAAVREKTSLSASNASLEKRLTELTRANELLKA 153
>sp|Q3LZX1|SPIKE_BCHK3 Spike glycoprotein OS=Bat coronavirus HKU3 GN=S PE=3 SV=1
Length = 1242
Score = 31.2 bits (69), Expect = 4.8, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 104 GVGSPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQRST-FGGINSKLSNVSSRLP 162
+G +++L +S + G++ V++Q L LV Q S+ FG I+S L+++ SRL
Sbjct: 899 AIGKIQESL----SSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLD 954
Query: 163 SV 164
V
Sbjct: 955 KV 956
>sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1 SV=4
Length = 5065
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 54 SHTLTRHQEILQDLTQEFYRL-RSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL 112
++T+ R + ILQD+ +E + R S K +++ A L E+ +E D LE G+ ++AL
Sbjct: 3685 TNTMARAK-ILQDIDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEAL 3743
Query: 113 LKEHASINRS 122
LKE R+
Sbjct: 3744 LKEREKRERA 3753
>sp|A9WSY0|RPOB_RENSM DNA-directed RNA polymerase subunit beta OS=Renibacterium
salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484
/ NBRC 15589 / NCIMB 2235) GN=rpoB PE=3 SV=1
Length = 1175
Score = 30.8 bits (68), Expect = 6.8, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 85 ASLLEDFREFDRTRLDLE-DGVGSPEQALLKEHASINRSTGQMDSVISQAQATLGALVFQ 143
+ +LE+F EFD R LE DG + E ALL + + G+ +V AQ L L F
Sbjct: 242 SQILEEFGEFDSIRATLEKDGTSTREDALLDIYRKLR--PGEPPTV-EAAQTLLDNLYFN 298
Query: 144 RSTFG-------------GINSKLSNVSSRLPSVNQILSSIK 172
+ GI+ L++ + + +N I++ IK
Sbjct: 299 PKRYDLAKVGRYKINRKLGIDKSLASPDASVLDINDIVAIIK 340
>sp|Q28298|RRBP1_CANFA Ribosome-binding protein 1 OS=Canis familiaris GN=RRBP1 PE=2 SV=1
Length = 1534
Score = 30.8 bits (68), Expect = 6.9, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 3 SYRKLVS--SKGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRH 60
SYR+ V + K+ + LE+G + L +LQQ N ++D ++ S++ S T
Sbjct: 897 SYREHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNTE- 955
Query: 61 QEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASIN 120
L L QE ++ L K E A R+ ++ R LE + E+ +L+ AS
Sbjct: 956 ---LAKLRQELSKVSKELVEKSEAA------RQEEQQRKALETKTAALEKQVLQLQASHK 1006
Query: 121 RS 122
S
Sbjct: 1007 ES 1008
>sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo PE=1 SV=1
Length = 5085
Score = 30.4 bits (67), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 54 SHTLTRHQEILQDLTQEFYRL-RSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL 112
++T+ R + ILQD+ +E + R S K +++ A L E+ +E D LE G+ ++AL
Sbjct: 3700 TNTMARAK-ILQDIDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEAL 3758
Query: 113 LKEHASINRS 122
LKE R+
Sbjct: 3759 LKEREKRERA 3768
>sp|Q9QYX7|PCLO_MOUSE Protein piccolo OS=Mus musculus GN=Pclo PE=1 SV=4
Length = 5068
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 54 SHTLTRHQEILQDLTQEFYRL-RSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL 112
++T+ R + ILQD+ +E + R S K +++ A L E+ +E D LE G+ ++AL
Sbjct: 3682 TNTMARAK-ILQDIDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEAL 3740
Query: 113 LKEHASINRS 122
LKE R+
Sbjct: 3741 LKEREKRERA 3750
>sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus GN=PCLO PE=2 SV=1
Length = 5120
Score = 30.4 bits (67), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 62 EILQDLTQEFYRL-RSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHASIN 120
+ILQD+ +E + R S K +++ A L E+ +E D LE G+ ++ALLKE
Sbjct: 3670 KILQDIDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEALLKEREKRE 3729
Query: 121 RS 122
R+
Sbjct: 3730 RA 3731
>sp|Q5GM68|CAPP2_ARATH Phosphoenolpyruvate carboxylase 2 OS=Arabidopsis thaliana GN=PPC2
PE=1 SV=2
Length = 963
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 3 SYRKLVSS-KGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRH- 60
+YR+ + K D A ES I+ LK+L Q+N ++ + ++ V LT H
Sbjct: 114 AYRRRIKKLKKGDFADEASATTESDIEETLKRLLQLNKTPEEVFDALKNQTVDLVLTAHP 173
Query: 61 -QEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKE-HAS 118
Q + + L Q+F R+R L Q +A +D D+ LD +AL +E A+
Sbjct: 174 TQSVRRSLLQKFGRIRDCL--TQLYA---KDITPDDKQELD---------EALQREIQAA 219
Query: 119 INRSTGQMDSVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVN 165
+ Q + G F + + G+ L V + L ++
Sbjct: 220 FRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIG 266
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,267,619
Number of Sequences: 539616
Number of extensions: 2183842
Number of successful extensions: 8384
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 8316
Number of HSP's gapped (non-prelim): 145
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)