BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029062
(199 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255577143|ref|XP_002529455.1| proline synthetase associated protein, putative [Ricinus communis]
gi|223531071|gb|EEF32921.1| proline synthetase associated protein, putative [Ricinus communis]
Length = 245
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/177 (80%), Positives = 154/177 (87%), Gaps = 1/177 (0%)
Query: 24 IDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP 82
+DK LPEDI+WHF+GHLQSNK KTLL GVPNL MV+GV NEK+AN LD+ VS LGR P
Sbjct: 69 VDKAPQLPEDIEWHFIGHLQSNKVKTLLAGVPNLAMVQGVDNEKVANVLDRVVSTLGRNP 128
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTL 142
LKV VQVNTSGE SKSGI+PSSC+ + EHV+LRCPNL SGLMTIGMPDYTSTPENFR L
Sbjct: 129 LKVFVQVNTSGEASKSGIEPSSCVALAEHVKLRCPNLVLSGLMTIGMPDYTSTPENFRKL 188
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
NCR EVCKALGMAED CELSMGMSGDFEQAIEMGST+VR+GSTIFGPREY KKQ N
Sbjct: 189 SNCRLEVCKALGMAEDHCELSMGMSGDFEQAIEMGSTNVRVGSTIFGPREYPKKQSN 245
>gi|225460901|ref|XP_002278892.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Vitis vinifera]
gi|297737470|emb|CBI26671.3| unnamed protein product [Vitis vinifera]
Length = 245
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/172 (80%), Positives = 153/172 (88%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+GHLQSNK K LL VPNL MVEGV NEKIAN LD+ VS + RKPLKVLV
Sbjct: 74 QLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRVVSGIRRKPLKVLV 133
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTSGE SKSG++PS C+ + +HV+L CPNLEFSGLMTIGMPDY+STPENFR LLNCR
Sbjct: 134 QVNTSGEVSKSGVEPSGCVELAKHVKLGCPNLEFSGLMTIGMPDYSSTPENFRRLLNCRI 193
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
EVCKALGMAE+QCELSMGMSGDFEQAIEMGST+VRIGSTIFGPREY KK+QN
Sbjct: 194 EVCKALGMAEEQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPKKEQN 245
>gi|147861921|emb|CAN80917.1| hypothetical protein VITISV_024616 [Vitis vinifera]
Length = 245
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/172 (80%), Positives = 153/172 (88%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+GHLQSNK K LL VPNL MVEGV NEKIAN LD+ VS + RKPLKVLV
Sbjct: 74 QLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRVVSGIRRKPLKVLV 133
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTSGE SKSG++PS C+ + +HV+L CPNLEFSGLMTIGMPDY+STPENFR LLNCR
Sbjct: 134 QVNTSGEVSKSGVEPSGCVELAKHVKLGCPNLEFSGLMTIGMPDYSSTPENFRRLLNCRI 193
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
EVCKALGMAE+QCELSMGMSGDFEQAIEMGST+VRIGSTIFGPREY KK+QN
Sbjct: 194 EVCKALGMAEEQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPKKEQN 245
>gi|449463228|ref|XP_004149336.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cucumis sativus]
Length = 245
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 159/178 (89%), Gaps = 1/178 (0%)
Query: 23 FIDKYNL-PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK L P+DI+WHF+GHLQSNK K+LL GVPNL MV+GV NEK+ANHLD+AVSNLGR
Sbjct: 68 LIDKAPLLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVQGVDNEKLANHLDRAVSNLGRD 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGE SKSGI+PS C+ + +HV+LRC +L+FSGLMTIGMPDYTSTPENF+T
Sbjct: 128 PLKVLVQVNTSGEISKSGIEPSGCIELAKHVKLRCSHLQFSGLMTIGMPDYTSTPENFKT 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
LL CRAEVCKAL MAE++CELSMGMS DFE AIEMGST+VRIGSTIFGPREYAKKQ +
Sbjct: 188 LLKCRAEVCKALEMAEERCELSMGMSNDFELAIEMGSTNVRIGSTIFGPREYAKKQAD 245
>gi|449503195|ref|XP_004161881.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cucumis sativus]
Length = 245
Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 158/178 (88%), Gaps = 1/178 (0%)
Query: 23 FIDKYNL-PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK L P+DI+WHF+GHLQSNK K+LL GVPNL MV+GV NEK+ANHLD+AVSNLGR
Sbjct: 68 LIDKAPLLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVQGVDNEKLANHLDRAVSNLGRD 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGE SKSGI+PS C+ + +HV+LRC +L+FSGLMTIGMPDYTSTPENF+T
Sbjct: 128 PLKVLVQVNTSGEISKSGIEPSGCIELAKHVKLRCSHLQFSGLMTIGMPDYTSTPENFKT 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
LL CRAEVCKAL MAE+ CELSMGMS DFE AIEMGST+VRIGSTIFGPREYAKKQ +
Sbjct: 188 LLKCRAEVCKALEMAEEHCELSMGMSNDFELAIEMGSTNVRIGSTIFGPREYAKKQAD 245
>gi|240256085|ref|NP_567760.4| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|14030629|gb|AAK52989.1|AF375405_1 AT4g26860/F10M23_200 [Arabidopsis thaliana]
gi|17978899|gb|AAL47419.1| AT4g26860/F10M23_200 [Arabidopsis thaliana]
gi|21536981|gb|AAM61322.1| putative proline synthetase associated protein [Arabidopsis
thaliana]
gi|332659861|gb|AEE85261.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 244
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/175 (81%), Positives = 153/175 (87%), Gaps = 1/175 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHFVGHLQSNKAKTLL GVPNL MV GV EK+ANHLD+AVSNLGR
Sbjct: 68 IIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRH 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGE SKSGI+PSS + + HV+ CPNL FSGLMTIGMPDYTSTPENFRT
Sbjct: 128 PLKVLVQVNTSGEVSKSGIEPSSVVELARHVKHHCPNLVFSGLMTIGMPDYTSTPENFRT 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L NCRA+VCKALGMAEDQ ELSMGMSGDFE AIEMGST+VR+GSTIFGPREY KK
Sbjct: 188 LSNCRADVCKALGMAEDQFELSMGMSGDFELAIEMGSTNVRVGSTIFGPREYPKK 242
>gi|356527075|ref|XP_003532139.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 1 [Glycine max]
Length = 244
Score = 295 bits (754), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 134/169 (79%), Positives = 153/169 (90%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+D++WHF+GHLQSNK KTLLGGVPNL MV+ V N+K+ANHLD+ VS LGR PLKVLVQ
Sbjct: 76 LPQDVEWHFIGHLQSNKVKTLLGGVPNLAMVQSVDNQKVANHLDRMVSTLGRNPLKVLVQ 135
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGEESKSGIDPS+C+ + +HV+L CPNL +SGLMTIGMPDYTSTP+NF+TL NCR E
Sbjct: 136 VNTSGEESKSGIDPSNCVELAKHVKLSCPNLVYSGLMTIGMPDYTSTPQNFQTLSNCRTE 195
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
VCKAL M E++CELSMGMSGDFE AIEMGST+VRIGSTIFGPREYAKKQ
Sbjct: 196 VCKALEMPEEECELSMGMSGDFELAIEMGSTNVRIGSTIFGPREYAKKQ 244
>gi|356567318|ref|XP_003551868.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Glycine max]
Length = 244
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/169 (80%), Positives = 151/169 (89%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP D++WHF+GHLQSNK KTLLGGVPNL MVE V N+KIAN+LD+ VS LGR PLKVLVQ
Sbjct: 76 LPPDVEWHFIGHLQSNKVKTLLGGVPNLAMVESVDNQKIANNLDRMVSTLGRNPLKVLVQ 135
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGEESKSGIDPS C+ + +HV+L CPNL FSGLMTIGMPDYTSTP+NF+TL NCR E
Sbjct: 136 VNTSGEESKSGIDPSDCVELAKHVKLSCPNLVFSGLMTIGMPDYTSTPQNFQTLSNCRTE 195
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
VCKAL M E++CELSMGMSGDFE AIEMGST+VRIGSTIFGPREYAKKQ
Sbjct: 196 VCKALEMPEEECELSMGMSGDFELAIEMGSTNVRIGSTIFGPREYAKKQ 244
>gi|297799306|ref|XP_002867537.1| AT4g26860/F10M23_200 [Arabidopsis lyrata subsp. lyrata]
gi|297313373|gb|EFH43796.1| AT4g26860/F10M23_200 [Arabidopsis lyrata subsp. lyrata]
Length = 244
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/175 (80%), Positives = 152/175 (86%), Gaps = 1/175 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHFVGHLQSNKAKTLL GVPNL MV GV EK+ANHLD+AVS LGR
Sbjct: 68 IIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAVSTLGRH 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGE SKSGI+PSS + + HV+ CPNL FSGLMTIGMPDYTSTPENFRT
Sbjct: 128 PLKVLVQVNTSGEVSKSGIEPSSVVELARHVKQHCPNLVFSGLMTIGMPDYTSTPENFRT 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L NCRA+VCKALGMAED+ ELSMGMSGDFE AIEMGST+VR+GSTIFGPREY KK
Sbjct: 188 LSNCRADVCKALGMAEDRFELSMGMSGDFELAIEMGSTNVRVGSTIFGPREYPKK 242
>gi|357126794|ref|XP_003565072.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Brachypodium distachyon]
Length = 249
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 157/178 (88%), Gaps = 1/178 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F+ K LPEDI+WHFVGHLQSNK K+L+ VPNLDMVEGVGNEKIANHLD+AV +LGR+
Sbjct: 71 FVTKAPQLPEDIRWHFVGHLQSNKVKSLVAAVPNLDMVEGVGNEKIANHLDRAVVSLGRE 130
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKV+VQVNTSGEESKSGIDPS C+ + +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 131 PLKVMVQVNTSGEESKSGIDPSRCVELAKHVKLDCPNLIFSGLMTIGMKDYSSTPENFKA 190
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
L+NC+ EVCKALGM +Q ELSMGMSGDFEQAIE+GST+VRIGSTIFGPR+Y ++QN
Sbjct: 191 LVNCKIEVCKALGMLTEQFELSMGMSGDFEQAIELGSTNVRIGSTIFGPRDYPNQKQN 248
>gi|356527077|ref|XP_003532140.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 2 [Glycine max]
Length = 252
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 153/177 (86%), Gaps = 8/177 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+D++WHF+GHLQSNK KTLLGGVPNL MV+ V N+K+ANHLD+ VS LGR PLKVLVQ
Sbjct: 76 LPQDVEWHFIGHLQSNKVKTLLGGVPNLAMVQSVDNQKVANHLDRMVSTLGRNPLKVLVQ 135
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENF--------R 140
VNTSGEESKSGIDPS+C+ + +HV+L CPNL +SGLMTIGMPDYTSTP+NF +
Sbjct: 136 VNTSGEESKSGIDPSNCVELAKHVKLSCPNLVYSGLMTIGMPDYTSTPQNFQVFSFVKNQ 195
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
TL NCR EVCKAL M E++CELSMGMSGDFE AIEMGST+VRIGSTIFGPREYAKKQ
Sbjct: 196 TLSNCRTEVCKALEMPEEECELSMGMSGDFELAIEMGSTNVRIGSTIFGPREYAKKQ 252
>gi|334186946|ref|NP_001190850.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|332659862|gb|AEE85262.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 254
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/185 (77%), Positives = 153/185 (82%), Gaps = 11/185 (5%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHFVGHLQSNKAKTLL GVPNL MV GV EK+ANHLD+AVSNLGR
Sbjct: 68 IIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRH 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR- 140
PLKVLVQVNTSGE SKSGI+PSS + + HV+ CPNL FSGLMTIGMPDYTSTPENFR
Sbjct: 128 PLKVLVQVNTSGEVSKSGIEPSSVVELARHVKHHCPNLVFSGLMTIGMPDYTSTPENFRV 187
Query: 141 ---------TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL NCRA+VCKALGMAEDQ ELSMGMSGDFE AIEMGST+VR+GSTIFGPR
Sbjct: 188 YSFPHKPGQTLSNCRADVCKALGMAEDQFELSMGMSGDFELAIEMGSTNVRVGSTIFGPR 247
Query: 192 EYAKK 196
EY KK
Sbjct: 248 EYPKK 252
>gi|242059919|ref|XP_002459105.1| hypothetical protein SORBIDRAFT_03g045890 [Sorghum bicolor]
gi|241931080|gb|EES04225.1| hypothetical protein SORBIDRAFT_03g045890 [Sorghum bicolor]
Length = 248
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/171 (77%), Positives = 152/171 (88%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPED++WHF+GHLQSNK K LL VPNLDMVEGV NEKIANHLD+AV++LGR+PLKVLVQ
Sbjct: 78 LPEDVRWHFIGHLQSNKVKPLLAAVPNLDMVEGVDNEKIANHLDRAVNSLGREPLKVLVQ 137
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGEESKSGIDPS C+ + +HV+L CP+L FSGLMTIGM DY+STPENF+ L+NC+ E
Sbjct: 138 VNTSGEESKSGIDPSKCVDLAKHVKLACPHLIFSGLMTIGMKDYSSTPENFKALVNCKLE 197
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
VCKAL + +Q ELSMGMSGDFEQAIEMGST+VRIGSTIFGPREY K+QN
Sbjct: 198 VCKALDIPTEQFELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPNKKQN 248
>gi|226500772|ref|NP_001152502.1| proline synthetase-like protein [Zea mays]
gi|195656949|gb|ACG47942.1| proline synthetase-like protein [Zea mays]
Length = 245
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F+ K LP+D +WHF+GHLQSNK K LL VPNLDMVEGV NEKIANHLD+AV++LGR+
Sbjct: 68 FVTKAPQLPQDTRWHFIGHLQSNKVKPLLAAVPNLDMVEGVDNEKIANHLDRAVNSLGRQ 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESKSGIDPS C+ + +HV+L CP+L FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKSGIDPSKCVDLAKHVKLACPHLIFSGLMTIGMKDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
L+NC+ EVCKAL + +Q ELSMGMSGDFEQAIEMGST+VRIGSTIFGPREY K+QN
Sbjct: 188 LVNCKLEVCKALDIPTEQFELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPNKRQN 245
>gi|224117946|ref|XP_002331519.1| predicted protein [Populus trichocarpa]
gi|222873743|gb|EEF10874.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/176 (76%), Positives = 152/176 (86%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
FI+K LPEDI+WHF+G+LQSNK K LL VPNLDMVE V +EKIANHLD+AV NLGRK
Sbjct: 63 FIEKAPQLPEDIEWHFIGNLQSNKVKPLLASVPNLDMVESVDDEKIANHLDRAVGNLGRK 122
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESKSG++PS C+ + +HV C NL+F GLMTIGM DYTSTPENF+
Sbjct: 123 PLKVLVQVNTSGEESKSGVEPSGCVELAKHVIQSCTNLQFCGLMTIGMLDYTSTPENFKA 182
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L NCR+EVCKALG+ E+QCELSMGMS DFEQAIEMGST+VRIGSTIFGPREY KK+
Sbjct: 183 LANCRSEVCKALGIPEEQCELSMGMSNDFEQAIEMGSTNVRIGSTIFGPREYPKKK 238
>gi|414878680|tpg|DAA55811.1| TPA: proline synthetase-like protein [Zea mays]
Length = 268
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F+ K LP+D +WHF+GHLQSNK K LL VPNLDMVEGV NEKIANHLD+AV++LGR+
Sbjct: 91 FVTKAPQLPQDTRWHFIGHLQSNKVKPLLAAVPNLDMVEGVDNEKIANHLDRAVNSLGRQ 150
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESKSGIDPS C+ + +HV+L CP+L FSGLMTIGM DY+STPENF+
Sbjct: 151 PLKVLVQVNTSGEESKSGIDPSKCVDLAKHVKLACPHLIFSGLMTIGMKDYSSTPENFKA 210
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
L+NC+ EVCKAL + +Q ELSMGMSGDFEQAIEMGST+VRIGSTIFGPREY K+QN
Sbjct: 211 LVNCKLEVCKALDIPTEQFELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPNKRQN 268
>gi|222619875|gb|EEE56007.1| hypothetical protein OsJ_04770 [Oryza sativa Japonica Group]
Length = 244
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/176 (75%), Positives = 151/176 (85%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F+ K LPEDI+WHF+GHLQSNK K+LL VPNL MVEGV N KIANHLD+AVS+LGR
Sbjct: 68 FVTKAPQLPEDIRWHFIGHLQSNKVKSLLAAVPNLHMVEGVDNVKIANHLDRAVSSLGRD 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESKSGIDPS C+ + +HV+L CP+L FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKSGIDPSRCVELAKHVKLACPHLIFSGLMTIGMKDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L+NC+ EVCKA+ M +Q ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY K+
Sbjct: 188 LVNCKLEVCKAIDMPAEQFELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYPNKK 243
>gi|218189740|gb|EEC72167.1| hypothetical protein OsI_05211 [Oryza sativa Indica Group]
Length = 244
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/176 (75%), Positives = 151/176 (85%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F+ K LPEDI+WHF+GHLQSNK K+LL VPNL MVEGV N KIANHLD+AVS+LGR
Sbjct: 68 FVTKAPQLPEDIRWHFIGHLQSNKVKSLLAAVPNLHMVEGVDNVKIANHLDRAVSSLGRD 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESKSGIDPS C+ + +HV+L CP+L FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKSGIDPSRCVELAKHVKLACPHLIFSGLMTIGMKDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L+NC+ EVCKA+ M +Q ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY K+
Sbjct: 188 LVNCKLEVCKAIDMPAEQFELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYPNKK 243
>gi|326526139|dbj|BAJ93246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 151/176 (85%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHF+G+LQSNKAK LL GVPNLDMVE V +EKIAN LD+ V++LGRK
Sbjct: 68 LIDKAPQLPEDIEWHFIGNLQSNKAKALLAGVPNLDMVESVDDEKIANRLDRVVADLGRK 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G+DPS C+G+ +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKFGVDPSGCVGLAKHVKLSCPNLVFSGLMTIGMLDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L +CR EVC LG+ E+QCELSMGMS DFEQAIEMGST+VR+GSTIFG REY KK+
Sbjct: 188 LTSCRKEVCDELGIPEEQCELSMGMSADFEQAIEMGSTNVRVGSTIFGAREYPKKE 243
>gi|116782168|gb|ABK22393.1| unknown [Picea sitchensis]
Length = 244
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 126/169 (74%), Positives = 147/169 (86%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WHF+GHLQSNKAK ++ GVPNL MVE V + K+ANHLD+AVS++GRKPLKVLVQ
Sbjct: 76 LPTDIQWHFIGHLQSNKAKAVIAGVPNLYMVESVDSSKVANHLDRAVSSIGRKPLKVLVQ 135
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGEESK G++PS C+ + +HV+ +CPNLEFSGLMTIGM DY+S PENF L CR E
Sbjct: 136 VNTSGEESKYGVEPSECVELAKHVKFQCPNLEFSGLMTIGMLDYSSRPENFEALSGCRIE 195
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
VCKALG++EDQCELSMGMSGDFEQAIEMGST+VRIGSTIFG REY K+
Sbjct: 196 VCKALGISEDQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGAREYPAKK 244
>gi|326511339|dbj|BAJ87683.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532008|dbj|BAK01380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 243
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 150/175 (85%), Gaps = 1/175 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHF+G+LQSNKAK LL GVPNLDMVE V +EKIAN LD+ V++LGRK
Sbjct: 68 LIDKAPQLPEDIEWHFIGNLQSNKAKALLAGVPNLDMVESVDDEKIANRLDRVVADLGRK 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G+DPS C+G+ +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKFGVDPSGCVGLAKHVKLSCPNLVFSGLMTIGMLDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L +CR EVC LG+ E+QCELSMGMS DFEQAIEMGST+VR+GSTIFG REY KK
Sbjct: 188 LTSCRKEVCDELGIPEEQCELSMGMSADFEQAIEMGSTNVRVGSTIFGAREYPKK 242
>gi|357134641|ref|XP_003568925.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Brachypodium distachyon]
Length = 243
Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 150/175 (85%), Gaps = 1/175 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHF+G+LQSNKAK LL GVPNLDMVE V +EKIAN LD+ V++LGRK
Sbjct: 68 LIDKAPQLPEDIEWHFIGNLQSNKAKALLAGVPNLDMVESVDDEKIANRLDRVVADLGRK 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G+DPS C+G+ +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKFGVDPSGCVGLAKHVKLSCPNLVFSGLMTIGMLDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L +CR EVC LG+ E+QCELSMGMS DFEQAIEMGST+VR+GSTIFG REY KK
Sbjct: 188 LSSCRKEVCDELGIPEEQCELSMGMSADFEQAIEMGSTNVRVGSTIFGAREYPKK 242
>gi|212275792|ref|NP_001130828.1| uncharacterized protein LOC100191932 [Zea mays]
gi|194690222|gb|ACF79195.1| unknown [Zea mays]
Length = 243
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 131/175 (74%), Positives = 150/175 (85%), Gaps = 1/175 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHF+G+LQSNKA+ LL GVPNLDMVE V +EKIAN LD+ V++LGRK
Sbjct: 68 LIDKAPQLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDEKIANRLDRVVADLGRK 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G+DPS C+ + +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKFGVDPSGCMELAKHVKLNCPNLVFSGLMTIGMLDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L NCR EVCK LG+ E+QCELSMGMS DFEQAIEMGST+VR+GSTIFG REY KK
Sbjct: 188 LANCREEVCKELGIPEEQCELSMGMSADFEQAIEMGSTNVRVGSTIFGAREYPKK 242
>gi|218196101|gb|EEC78528.1| hypothetical protein OsI_18473 [Oryza sativa Indica Group]
gi|222630215|gb|EEE62347.1| hypothetical protein OsJ_17136 [Oryza sativa Japonica Group]
Length = 243
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 151/175 (86%), Gaps = 1/175 (0%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK + LPEDI+WHF+G+LQSNKA+ LL GVPNLDMVE V ++KIAN LD+ V++LGRK
Sbjct: 68 LIDKASQLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRK 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G+DPS C+ + +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 128 PLKVLVQVNTSGEESKFGVDPSGCVELAKHVKLGCPNLVFSGLMTIGMLDYSSTPENFKA 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L NCR EVCK LG+ E+QCELSMGMS DFEQAIEMGST+VR+GSTIFG REY KK
Sbjct: 188 LANCRKEVCKELGIPEEQCELSMGMSADFEQAIEMGSTNVRVGSTIFGAREYPKK 242
>gi|255554799|ref|XP_002518437.1| proline synthetase associated protein, putative [Ricinus communis]
gi|223542282|gb|EEF43824.1| proline synthetase associated protein, putative [Ricinus communis]
Length = 270
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/169 (75%), Positives = 147/169 (86%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDI+WHF+G+LQSNK K LL VPNL +VE V ++KIANHLD+AV NLGRKPLKVLVQ
Sbjct: 102 LPEDIEWHFIGNLQSNKVKPLLAAVPNLAVVESVDDQKIANHLDRAVGNLGRKPLKVLVQ 161
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGEESK G++P+ C+ + +HV CPNLEF GLMTIGM DY+STPENF+TL NCR+E
Sbjct: 162 VNTSGEESKYGVEPAGCVELAKHVTQSCPNLEFCGLMTIGMLDYSSTPENFKTLANCRSE 221
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
VCK LG+ E+QCELSMGMS DFEQAIEMGST+VRIGSTIFGPREY KK+
Sbjct: 222 VCKTLGIPEEQCELSMGMSNDFEQAIEMGSTNVRIGSTIFGPREYPKKK 270
>gi|359483335|ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Vitis vinifera]
Length = 264
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/170 (75%), Positives = 150/170 (88%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+G+LQSNK K LL GVPNL +VE V +EKIA+ LD+ V+ +GRKPLKV+V
Sbjct: 93 QLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKIADRLDRMVATIGRKPLKVMV 152
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTSGEESKSG+DP++C+ +V+HV L CPNLEF GLMTIGM DYTSTPENF+TL NCR+
Sbjct: 153 QVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTIGMLDYTSTPENFKTLANCRS 212
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
EVCK+LG+ E+QCELSMGMSGDFE AIEMGST+VRIGSTIFG REY KKQ
Sbjct: 213 EVCKSLGITEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKKQ 262
>gi|4455209|emb|CAB36532.1| putative Proline synthetase associated protein [Arabidopsis
thaliana]
gi|7269539|emb|CAB79541.1| putative Proline synthetase associated protein [Arabidopsis
thaliana]
Length = 262
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 149/192 (77%), Gaps = 19/192 (9%)
Query: 24 IDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP 82
IDK LPEDI+WHFVGHLQSNKAKTLL GVPNL MV GV EK+ANHLD+AVSNLGR P
Sbjct: 69 IDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRHP 128
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTL 142
LKVLVQVNTSGE SKSGI+PSS + + HV+ CPNL FSGLMTIGMPDYTSTPENFR
Sbjct: 129 LKVLVQVNTSGEVSKSGIEPSSVVELARHVKHHCPNLVFSGLMTIGMPDYTSTPENFRVF 188
Query: 143 LNC------------------RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIG 184
RA+VCKALGMAEDQ ELSMGMSGDFE AIEMGST+VR+G
Sbjct: 189 YYLIGYLFYVFSGYSYKFYLPRADVCKALGMAEDQFELSMGMSGDFELAIEMGSTNVRVG 248
Query: 185 STIFGPREYAKK 196
STIFGPREY KK
Sbjct: 249 STIFGPREYPKK 260
>gi|302144100|emb|CBI23205.3| unnamed protein product [Vitis vinifera]
Length = 311
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/170 (75%), Positives = 150/170 (88%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+G+LQSNK K LL GVPNL +VE V +EKIA+ LD+ V+ +GRKPLKV+V
Sbjct: 140 QLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKIADRLDRMVATIGRKPLKVMV 199
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTSGEESKSG+DP++C+ +V+HV L CPNLEF GLMTIGM DYTSTPENF+TL NCR+
Sbjct: 200 QVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTIGMLDYTSTPENFKTLANCRS 259
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
EVCK+LG+ E+QCELSMGMSGDFE AIEMGST+VRIGSTIFG REY KKQ
Sbjct: 260 EVCKSLGITEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKKQ 309
>gi|242089533|ref|XP_002440599.1| hypothetical protein SORBIDRAFT_09g003850 [Sorghum bicolor]
gi|241945884|gb|EES19029.1| hypothetical protein SORBIDRAFT_09g003850 [Sorghum bicolor]
Length = 243
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 150/175 (85%), Gaps = 1/175 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LPEDI+WHF+G+LQSNKA+ LL GVPNLDMVE V +EKIA+ LD+ V++LGRK
Sbjct: 68 LIDKAPQLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDEKIASRLDRVVADLGRK 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G+DPS C+ + +HV+L CPNL FSGLMTIGM DY+STPENF+T
Sbjct: 128 PLKVLVQVNTSGEESKFGVDPSGCVELAKHVKLNCPNLVFSGLMTIGMLDYSSTPENFKT 187
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L NCR VCK LG+ E+QCELSMGMS DFEQAIEMGST+VR+GSTIFG REY KK
Sbjct: 188 LANCREGVCKELGIPEEQCELSMGMSADFEQAIEMGSTNVRVGSTIFGAREYPKK 242
>gi|449479493|ref|XP_004155614.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cucumis sativus]
Length = 246
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 144/168 (85%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDI+WHF+G+LQSNK K LL GVPNL +VE V +EKIAN LD+ V ++GRKPLKV +Q
Sbjct: 78 LPEDIEWHFIGNLQSNKVKPLLSGVPNLAVVETVDDEKIANRLDRMVESIGRKPLKVFIQ 137
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGEESKSG++PS C+ + +HV L CPNL+FSGLMTIGM DYTSTPENF+ L NCR E
Sbjct: 138 VNTSGEESKSGVEPSGCVELAKHVSLNCPNLQFSGLMTIGMLDYTSTPENFKLLANCRTE 197
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
VCKAL ++E+QCELSMGMS DFE A+EMGST+VR+GSTIFG REY KK
Sbjct: 198 VCKALEISEEQCELSMGMSADFELAVEMGSTNVRVGSTIFGAREYLKK 245
>gi|302790652|ref|XP_002977093.1| hypothetical protein SELMODRAFT_106172 [Selaginella moellendorffii]
gi|300155069|gb|EFJ21702.1| hypothetical protein SELMODRAFT_106172 [Selaginella moellendorffii]
Length = 244
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/176 (70%), Positives = 147/176 (83%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
FIDK LP DI+WHF+GHLQSNKAK+L+ VP L MVEG+ N K+A+ LD+AVS L R
Sbjct: 69 FIDKAPQLPSDIRWHFIGHLQSNKAKSLVANVPQLYMVEGIDNFKVASLLDRAVSLLQRN 128
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESKSG++PS+C+ + + ++ CPNLEFSGLMTIGM DYTSTPENF+
Sbjct: 129 PLKVLVQVNTSGEESKSGVEPSACVELAKQIKADCPNLEFSGLMTIGMQDYTSTPENFKA 188
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L+NCR +VCKAL + + CELSMGMSGDFEQAIEMGST+VRIGSTIFG REY K+
Sbjct: 189 LVNCREDVCKALEIPQSSCELSMGMSGDFEQAIEMGSTNVRIGSTIFGAREYPAKK 244
>gi|302763195|ref|XP_002965019.1| hypothetical protein SELMODRAFT_83798 [Selaginella moellendorffii]
gi|300167252|gb|EFJ33857.1| hypothetical protein SELMODRAFT_83798 [Selaginella moellendorffii]
Length = 244
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 124/176 (70%), Positives = 147/176 (83%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
FI+K LP DI+WHF+GHLQSNKAK+L+ VP L MVEG+ N K+A+ LD+AVS L R
Sbjct: 69 FIEKAPQLPSDIRWHFIGHLQSNKAKSLVANVPQLYMVEGIDNFKVASLLDRAVSLLQRN 128
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESKSG++PS+C+ + + ++ CPNLEFSGLMTIGM DYTSTPENF+
Sbjct: 129 PLKVLVQVNTSGEESKSGVEPSACVELAKQIKADCPNLEFSGLMTIGMQDYTSTPENFKA 188
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
LLNCR +VCKAL + + CELSMGMSGDFEQAIEMGST+VRIGSTIFG REY K+
Sbjct: 189 LLNCREDVCKALEIPQSSCELSMGMSGDFEQAIEMGSTNVRIGSTIFGAREYPAKK 244
>gi|30682530|ref|NP_849649.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|3157934|gb|AAC17617.1| Similar to hypothetical protein F09E5.8 gb|U37429 from C. elegans.
ESTs gb|T42019 and gb|N97000 come from this gene
[Arabidopsis thaliana]
gi|332190697|gb|AEE28818.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 255
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/168 (73%), Positives = 142/168 (84%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDI+WHF+G+LQSNK K LL GVPNL VE V +EKIAN LD+ V N+GRKPLKV VQ
Sbjct: 88 LPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEKIANMLDRVVGNIGRKPLKVFVQ 147
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGE+SK G++PS C+G+ +HV+ C NLEFSGLMTIGM DYTSTPENF+ L CR+E
Sbjct: 148 VNTSGEDSKFGVEPSGCVGLAKHVKEACSNLEFSGLMTIGMADYTSTPENFKLLAKCRSE 207
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
VCK LG+ E+QCELSMGMSGDFE AIE+GST+VRIGSTIFG REY KK
Sbjct: 208 VCKELGIPEEQCELSMGMSGDFELAIELGSTNVRIGSTIFGAREYPKK 255
>gi|297844046|ref|XP_002889904.1| alanine racemase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335746|gb|EFH66163.1| alanine racemase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 242
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 144/171 (84%), Gaps = 2/171 (1%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DI+WHF+G+LQSNK K LL GVPNL MVE V +EKIAN LD+ V N+GRKPLKVLV
Sbjct: 72 QLPDDIEWHFIGNLQSNKVKPLLSGVPNLVMVESVDDEKIANMLDRVVGNIGRKPLKVLV 131
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTSGEESK G++PS C+G+ +HV+ C NLEFSGLMTIGM DYTSTPENF+ L CR+
Sbjct: 132 QVNTSGEESKFGVEPSGCVGLAKHVKEACSNLEFSGLMTIGMADYTSTPENFKLLAKCRS 191
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQA--IEMGSTSVRIGSTIFGPREYAKK 196
EVCK LG+ E+QCELSMGMSGDFE A IE+GST+VRIGSTIFG REY KK
Sbjct: 192 EVCKELGIPEEQCELSMGMSGDFELALQIELGSTNVRIGSTIFGAREYPKK 242
>gi|388521207|gb|AFK48665.1| unknown [Medicago truncatula]
Length = 244
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 143/171 (83%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+G+LQSNK K LL GVPNL VE V +EKIAN LD+A++ +GRKPLKV V
Sbjct: 73 QLPEDIEWHFIGNLQSNKVKPLLAGVPNLAYVESVDDEKIANLLDRAIAKIGRKPLKVFV 132
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
+VNTSGE SK G++P+ CL +V+H+ CPNLEF GLMTIGM DY+STPENF+TL CR+
Sbjct: 133 EVNTSGETSKFGVEPAQCLDLVKHIFTNCPNLEFCGLMTIGMLDYSSTPENFKTLSKCRS 192
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
E+C ALG++E QCELSMGM+ DFEQAIEMGST+VRIG+ IFG REY +K++
Sbjct: 193 EICAALGISETQCELSMGMTADFEQAIEMGSTTVRIGTAIFGAREYPQKEE 243
>gi|18391333|ref|NP_563897.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|16226282|gb|AAL16123.1|AF428291_1 At1g11930/F12F1_20 [Arabidopsis thaliana]
gi|21436037|gb|AAM51596.1| At1g11930/F12F1_20 [Arabidopsis thaliana]
gi|332190696|gb|AEE28817.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 257
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 142/170 (83%), Gaps = 2/170 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDI+WHF+G+LQSNK K LL GVPNL VE V +EKIAN LD+ V N+GRKPLKV VQ
Sbjct: 88 LPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEKIANMLDRVVGNIGRKPLKVFVQ 147
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGE+SK G++PS C+G+ +HV+ C NLEFSGLMTIGM DYTSTPENF+ L CR+E
Sbjct: 148 VNTSGEDSKFGVEPSGCVGLAKHVKEACSNLEFSGLMTIGMADYTSTPENFKLLAKCRSE 207
Query: 149 VCKALGMAEDQCELSMGMSGDFEQA--IEMGSTSVRIGSTIFGPREYAKK 196
VCK LG+ E+QCELSMGMSGDFE A IE+GST+VRIGSTIFG REY KK
Sbjct: 208 VCKELGIPEEQCELSMGMSGDFELALQIELGSTNVRIGSTIFGAREYPKK 257
>gi|351721098|ref|NP_001237710.1| uncharacterized protein LOC100527295 [Glycine max]
gi|255632027|gb|ACU16366.1| unknown [Glycine max]
Length = 239
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/170 (69%), Positives = 144/170 (84%), Gaps = 1/170 (0%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WH +G+LQSNK K L+ VPNL VE V ++KIAN LD+AV+N+GRKPLKV VQ
Sbjct: 71 LPDDIQWHLIGNLQSNKVKPLIAAVPNLACVETVDDKKIANFLDRAVANVGRKPLKVFVQ 130
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGE SK G++P+ C+ +V+H+ CPNLEFSGLMTIGM DY+STPENF TL NCR+E
Sbjct: 131 VNTSGETSKFGVEPALCVDLVKHI-TNCPNLEFSGLMTIGMLDYSSTPENFETLSNCRSE 189
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
VCKALG++E QCELSMGM+GDFEQAIEMGST+VRIG+ IFG REY K++
Sbjct: 190 VCKALGISETQCELSMGMTGDFEQAIEMGSTNVRIGTAIFGAREYPPKEE 239
>gi|168010071|ref|XP_001757728.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691004|gb|EDQ77368.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 142/173 (82%), Gaps = 1/173 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK PED KWHF+GHLQSNKAK L+ GVPNL MVEGV +EK+A+HLDKAVS LGR
Sbjct: 67 LIDKAPQFPEDTKWHFIGHLQSNKAKALVTGVPNLYMVEGVDSEKVADHLDKAVSGLGRP 126
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGE SKSG++PS+C+ + +H+ +CPNL FSG MTIG DYTSTPENF+T
Sbjct: 127 PLKVLVQVNTSGEASKSGVEPSNCVELAKHIEEKCPNLHFSGFMTIGNLDYTSTPENFKT 186
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L +C+ + C+ LG+ ++ ELSMGMS DFE AIEMGST+VR+GSTIFG REYA
Sbjct: 187 LASCQEKTCRELGIPMEEFELSMGMSSDFELAIEMGSTNVRVGSTIFGAREYA 239
>gi|168025677|ref|XP_001765360.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683413|gb|EDQ69823.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LP+DIKWHF+GHLQSNKAK L+ VPNL MVEGV ++K+ANHL++AVS LGR
Sbjct: 67 LIDKAPQLPQDIKWHFIGHLQSNKAKALITSVPNLYMVEGVDSQKVANHLNRAVSGLGRP 126
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PL VLVQVNTS EESKSG++PS C+ + +H++ CPNL FSGLMTIGM Y+ST E F+T
Sbjct: 127 PLSVLVQVNTSREESKSGVNPSECVDLAKHLKEECPNLRFSGLMTIGMLGYSSTAEFFKT 186
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L+NCR +VCK L + ++CELSMGMSGDFE AIEMGST+VR+GSTIFG R Y +Q
Sbjct: 187 LVNCREKVCKELEIPVEECELSMGMSGDFELAIEMGSTNVRVGSTIFGARSYPGRQ 242
>gi|384246354|gb|EIE19844.1| hypothetical protein COCSUDRAFT_34111 [Coccomyxa subellipsoidea
C-169]
Length = 241
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK LP+DI+WHFVGHLQSNKAKTLL GVPNL ++E V EK+AN LD + LGR
Sbjct: 66 IVDKAPKLPDDIRWHFVGHLQSNKAKTLLDGVPNLALLETVDTEKLANKLDSTLQQLGRA 125
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PL VLVQVNTSGEESK G++PS C + H+ RC +L F+GLMTIG PDY+S PENF+
Sbjct: 126 PLPVLVQVNTSGEESKYGVEPSECTALARHISDRCSHLRFAGLMTIGQPDYSSRPENFQC 185
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L CR EVCK LG++ ELSMGMSGDFEQAIEMGST+VR+GSTIFG R+Y+KKQ
Sbjct: 186 LEACRDEVCKELGLSPADVELSMGMSGDFEQAIEMGSTNVRVGSTIFGARDYSKKQ 241
>gi|297603837|ref|NP_001054662.2| Os05g0150000 [Oryza sativa Japonica Group]
gi|255676024|dbj|BAF16576.2| Os05g0150000, partial [Oryza sativa Japonica Group]
Length = 214
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/152 (73%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK + LPEDI+WHF+G+LQSNKA+ LL GVPNLDMVE V ++KIAN LD+ V++LGRK
Sbjct: 63 LIDKASQLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRK 122
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G+DPS C+ + +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 123 PLKVLVQVNTSGEESKFGVDPSGCVELAKHVKLGCPNLVFSGLMTIGMLDYSSTPENFKA 182
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQA 173
L NCR EVCK LG+ E+QCELSMGMS DFEQA
Sbjct: 183 LANCRKEVCKELGIPEEQCELSMGMSADFEQA 214
>gi|413949975|gb|AFW82624.1| hypothetical protein ZEAMMB73_317695 [Zea mays]
Length = 162
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 126/146 (86%)
Query: 51 GGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVE 110
GVPNLDMVE V +EKIAN LD+ V++LGRKPLKVLVQVNTSGEESK G+DPS C+ + +
Sbjct: 16 AGVPNLDMVESVDDEKIANRLDRVVADLGRKPLKVLVQVNTSGEESKFGVDPSGCMELAK 75
Query: 111 HVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDF 170
HV+L CPNL FSGLMTIGM DY+STPENF+ L NCR EVCK LG+ E+QCELSMGMS DF
Sbjct: 76 HVKLNCPNLVFSGLMTIGMLDYSSTPENFKALANCREEVCKELGIPEEQCELSMGMSADF 135
Query: 171 EQAIEMGSTSVRIGSTIFGPREYAKK 196
EQAIEMGST+VR+GSTIFG REY KK
Sbjct: 136 EQAIEMGSTNVRVGSTIFGAREYPKK 161
>gi|356532307|ref|XP_003534715.1| PREDICTED: LOW QUALITY PROTEIN: proline synthase co-transcribed
bacterial homolog protein-like [Glycine max]
Length = 225
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 139/171 (81%), Gaps = 2/171 (1%)
Query: 29 LPEDIKWH-FVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DI+WH +G+LQSNK K L+ VPNL V+ V +EKIAN LD+AV N+GRK LKV
Sbjct: 55 LPDDIEWHNLIGNLQSNKVKPLIAAVPNLACVQTVDDEKIANLLDRAVENVGRKSLKVFF 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTSGE SK G++P+ + +V+H+ CPNLEF GLMTIGM DY+STPENF+TL NCR+
Sbjct: 115 QVNTSGETSKFGVEPAQWVDLVKHI-TNCPNLEFCGLMTIGMLDYSSTPENFKTLSNCRS 173
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
EVCKA+G++E QCELSMGM+GDFEQAIEMGST+VR G+ IFG REY K++
Sbjct: 174 EVCKAIGISETQCELSMGMTGDFEQAIEMGSTNVRNGTAIFGSREYPPKEE 224
>gi|307110697|gb|EFN58933.1| hypothetical protein CHLNCDRAFT_48564 [Chlorella variabilis]
Length = 223
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/168 (63%), Positives = 128/168 (76%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+D WHF+GHLQSNK K LL VPNL ++E V + K+A+ LD V++LGR PL V VQ
Sbjct: 55 LPQDCAWHFIGHLQSNKVKALLEAVPNLALLETVDSAKLASKLDSTVASLGRPPLAVFVQ 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGEESK G++P CL + H+ +CP+L +GLMTIGMPDYTS PENFR L +CR
Sbjct: 115 VNTSGEESKYGVEPQDCLALARHIHEQCPHLRLAGLMTIGMPDYTSRPENFRCLADCRRA 174
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
VC ALG+ E ELSMGMSGDFE AIEMGST+VR+GSTIFG R+Y K
Sbjct: 175 VCAALGLQEGDLELSMGMSGDFEAAIEMGSTNVRVGSTIFGARQYPAK 222
>gi|145340986|ref|XP_001415597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575820|gb|ABO93889.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 237
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 128/168 (76%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
+PED +WHF+GHLQSNK K LL P L M+E V + K+AN L+ AV L+VLVQ
Sbjct: 70 MPEDTRWHFIGHLQSNKCKALLEACPRLAMLETVDSAKLANKLNAAVPEGRVDALRVLVQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGE SK G++P C+ + +H+ CP L+F+GLMTIGMPDYTS PENF TL CR E
Sbjct: 130 VNTSGEASKHGVEPGDCVTLAKHIVSECPRLKFAGLMTIGMPDYTSKPENFETLRKCREE 189
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
VC ALGM+E +CELSMGMSGDFE AI MGST+VR+GSTIFG R+Y+KK
Sbjct: 190 VCAALGMSESECELSMGMSGDFEAAIAMGSTNVRVGSTIFGARDYSKK 237
>gi|308799451|ref|XP_003074506.1| alanine racemase family protein (ISS) [Ostreococcus tauri]
gi|116000677|emb|CAL50357.1| alanine racemase family protein (ISS) [Ostreococcus tauri]
Length = 236
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK LP+D++WHFVGHLQSNKAK LL GVP+L M+E + +EK+AN ++ AV
Sbjct: 61 LIDKAPTLPDDVRWHFVGHLQSNKAKALLEGVPSLAMLETIDSEKLANKVNNAVPERRAN 120
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
L V+VQVNTSGEESK G +P+ + + H+ CP L F+GLMTIGMPDYTS PE F T
Sbjct: 121 ALDVMVQVNTSGEESKHGCEPADAVKLARHIVDNCPRLRFAGLMTIGMPDYTSRPECFET 180
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L+ CR +VC LG+ E CELSMGMSGDFEQAIEMGST+VR+GSTIFG REY K
Sbjct: 181 LVECRRQVCAELGLDESACELSMGMSGDFEQAIEMGSTNVRVGSTIFGAREYPNK 235
>gi|302847524|ref|XP_002955296.1| hypothetical protein VOLCADRAFT_65697 [Volvox carteri f.
nagariensis]
gi|300259368|gb|EFJ43596.1| hypothetical protein VOLCADRAFT_65697 [Volvox carteri f.
nagariensis]
Length = 250
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLV 87
LP D++WHF+GHLQSNK K ++ VPNL MVE V + K+A+ L++AV GR +PL V+V
Sbjct: 70 LPSDVQWHFIGHLQSNKVKAVVENVPNLAMVETVDSTKLADKLNRAVEVAGRTQPLAVMV 129
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTSGEESK G++P C+ + +H+ CP L +GLMTIGMPDY+S PENF L +CR
Sbjct: 130 QVNTSGEESKFGVEPGECVALAKHIVQSCPKLRLAGLMTIGMPDYSSRPENFECLADCRM 189
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+V LGM + ELSMGMSGDFEQAIEMGST++R+GSTIFG R+Y+K
Sbjct: 190 KVAAELGMVPEHLELSMGMSGDFEQAIEMGSTNIRVGSTIFGARDYSK 237
>gi|56541811|emb|CAD29783.1| putative proline synthetase associated protein [Oryza sativa]
Length = 220
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 121/144 (84%), Gaps = 1/144 (0%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK + LPEDI+WHF+G+LQSNKA+ LL GVPNLDMVE V ++KIAN LD+ V++LGRK
Sbjct: 64 LIDKASQLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRK 123
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQVNTSGEESK G++PS C+ + +HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 124 PLKVLVQVNTSGEESKFGVNPSGCVELAKHVKLGCPNLVFSGLMTIGMLDYSSTPENFKA 183
Query: 142 LLNCRAEVCKALGMAEDQCELSMG 165
L NCR EVCK LG+ +QCELSM
Sbjct: 184 LANCRKEVCKELGIXXEQCELSMA 207
>gi|159463278|ref|XP_001689869.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283857|gb|EDP09607.1| predicted protein [Chlamydomonas reinhardtii]
Length = 251
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GR-KPLKVL 86
LP D++WHF+GHLQSNK K +L GVPNL MVE V + K+A+ L+K + + GR PL V+
Sbjct: 73 LPGDVQWHFIGHLQSNKVKAVLEGVPNLAMVETVDSAKLADKLNKTLETVSGRTAPLAVM 132
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
VQVNTSGEESK G++P+ C+ + +H+ CP L +GLMTIGMPDY+S PE F L CR
Sbjct: 133 VQVNTSGEESKYGVEPTECVSLAKHIAQNCPKLRLAGLMTIGMPDYSSRPECFICLSGCR 192
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
V LG+ +Q ELSMGMSGDFEQAIEMGST++R+GSTIFG REY K
Sbjct: 193 DAVATELGLRPEQLELSMGMSGDFEQAIEMGSTNIRVGSTIFGAREYKPK 242
>gi|255084663|ref|XP_002508906.1| predicted protein [Micromonas sp. RCC299]
gi|226524183|gb|ACO70164.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 121/170 (71%), Gaps = 7/170 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-------SNLGRK 81
+P D WHF+GHLQSNK K L+ GVP+L +VE V K+AN L+ AV + +G
Sbjct: 70 MPPDTVWHFIGHLQSNKVKALVTGVPSLAVVETVDTVKLANKLNTAVGEFLEERARVGAG 129
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
L V+VQVNTSGEESK G++P+ CL + H+R C NL F GLMTIGMPDYTS PENF+T
Sbjct: 130 KLGVMVQVNTSGEESKFGVEPNDCLPLARHIRDECSNLAFRGLMTIGMPDYTSRPENFQT 189
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L CR EVC LG+ ELSMGMSGDFE AIEMGS +VR+GSTIFG R
Sbjct: 190 LAACRDEVCAGLGLDAKDVELSMGMSGDFESAIEMGSDNVRVGSTIFGAR 239
>gi|449434390|ref|XP_004134979.1| PREDICTED: uncharacterized protein LOC101211065 [Cucumis sativus]
Length = 596
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 112/130 (86%)
Query: 67 IANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMT 126
IAN LD+ V ++GRKPLKV +QVNTSGEESKSG++PS C+ + +HV L CPNL+FSGLMT
Sbjct: 466 IANRLDRMVESIGRKPLKVFIQVNTSGEESKSGVEPSGCVELAKHVSLNCPNLQFSGLMT 525
Query: 127 IGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGST 186
IGM DYTSTPENF+ L NCR EVCKAL ++E+QCELSMGMS DFE A+EMGST+VR+GST
Sbjct: 526 IGMLDYTSTPENFKLLANCRTEVCKALEISEEQCELSMGMSADFELAVEMGSTNVRVGST 585
Query: 187 IFGPREYAKK 196
IFG REY KK
Sbjct: 586 IFGAREYLKK 595
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLL 50
LPEDI+WHF+G+LQSNK K LL
Sbjct: 348 QLPEDIEWHFIGNLQSNKVKPLL 370
>gi|412994038|emb|CCO14549.1| predicted protein [Bathycoccus prasinos]
Length = 245
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 124/175 (70%), Gaps = 8/175 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG----RKPLK 84
LP DI WHFVGH+QSNKAK L+ GVPNL +VE V ++K+A+ L+ AV + L
Sbjct: 71 LPNDISWHFVGHIQSNKAKALVQGVPNLKVVETVDSKKLADKLNVAVEQCKALREERLLD 130
Query: 85 VLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
V+VQVNTSGEESK G+ P + + + +H+R C L+ GLMTIGMPDYTS PENF L
Sbjct: 131 VMVQVNTSGEESKYGVAPGENVVDLAKHIRDNCKELKLIGLMTIGMPDYTSKPENFDRLK 190
Query: 144 NCRAEVCKALGMAED---QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
R VC ALG+ ED ELSMGMSGDFE AI MGST+VR+GSTIFG R+Y+K
Sbjct: 191 EERKRVCDALGLGEDYERALELSMGMSGDFENAIAMGSTNVRVGSTIFGARDYSK 245
>gi|72389014|ref|XP_844802.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176349|gb|AAX70461.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801336|gb|AAZ11243.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261328062|emb|CBH11039.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 257
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVLV 87
LP DI WHF+GHLQSNK K LL GV L +V+ V +E +A LD VS G +PL V V
Sbjct: 83 LPGDIHWHFIGHLQSNKVKELLSGVSGLQIVQTVDSESLAQKLDSGCVSYRGGRPLDVYV 142
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGE +KSG++P S+ + + H+ +CPNL +GLMTIGMPDYTS PENF LL CR
Sbjct: 143 QVNTSGETTKSGVEPGSATVELARHISTKCPNLRLTGLMTIGMPDYTSRPENFECLLRCR 202
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
EV AL + LSMGMSGD+ AI MGST VR+G+ +FG R Y K
Sbjct: 203 EEVAAALNLDATTLALSMGMSGDYTNAIRMGSTVVRVGTGLFGQRYYPPK 252
>gi|401422629|ref|XP_003875802.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492041|emb|CBZ27316.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 245
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKPLKVLV 87
LPED WHF+GHLQSNK K LL GVPNL +++ + +E +A+ +++ G +PL+V V
Sbjct: 75 LPEDTMWHFIGHLQSNKVKELLEGVPNLRVIQTIDSENLASKVNEGCRKYRGGRPLEVYV 134
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEE+KSG +P + + + +++ CP L+ GLMTIGMPDYTS PENF L CR
Sbjct: 135 QVNTSGEETKSGTEPGEATVTLAKYIVDECPLLQLKGLMTIGMPDYTSRPENFECLTKCR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+V +A+ MA + ELSMGMSGD+ AI MGST+VR+GS+IFG R Y +K+
Sbjct: 195 QDVSQAVQMAPEDLELSMGMSGDYVNAIRMGSTTVRVGSSIFGERYYPRKE 245
>gi|157869914|ref|XP_001683508.1| putative alanine racemase [Leishmania major strain Friedlin]
gi|68126573|emb|CAJ05058.1| putative alanine racemase [Leishmania major strain Friedlin]
Length = 245
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKPLKVLV 87
LPED WHF+GHLQSNK K LL GVPNL +V+ + +E +A+ +++ G +PL+V +
Sbjct: 75 LPEDTVWHFIGHLQSNKVKELLEGVPNLRVVQTIDSENLASKVNEGCRKYRGGRPLEVYI 134
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEE+KSG +P + + + +++ CP L+ GLMTIGMPDYTS PENF L CR
Sbjct: 135 QVNTSGEETKSGTEPGEATVTLAKYIADECPLLQLKGLMTIGMPDYTSRPENFECLTKCR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+V +A+ MA + ELSMGMSGD+ AI MGST+VR+G++IFG R Y KQ
Sbjct: 195 EDVAQAVQMAPEDLELSMGMSGDYVNAIRMGSTAVRVGTSIFGQRYYPHKQ 245
>gi|146087566|ref|XP_001465860.1| putative alanine racemase [Leishmania infantum JPCM5]
gi|398015782|ref|XP_003861080.1| hypothetical protein, conserved [Leishmania donovani]
gi|134069960|emb|CAM68291.1| putative alanine racemase [Leishmania infantum JPCM5]
gi|322499304|emb|CBZ34378.1| hypothetical protein, conserved [Leishmania donovani]
Length = 245
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKPLKVLV 87
LPED WHF+GHLQSNK K LL GVPNL +++ + +E +A+ +++ G +PL+V +
Sbjct: 75 LPEDTVWHFIGHLQSNKVKELLEGVPNLRVIQTIDSENLASKVNEGCRKYRGGRPLEVYI 134
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEE+KSG +P + + + +++ CP L GLMTIGMPDYTS PENF L CR
Sbjct: 135 QVNTSGEETKSGTEPGEATVALAKYIVDECPLLRLKGLMTIGMPDYTSRPENFECLTKCR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+V +A+ MA + ELSMGMSGD+ AI MGST+VR+G++IFG R Y KQ
Sbjct: 195 EDVAQAVQMAPEDLELSMGMSGDYVNAIRMGSTTVRVGTSIFGQRYYPHKQ 245
>gi|303289263|ref|XP_003063919.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454235|gb|EEH51541.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 248
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 121/174 (69%), Gaps = 7/174 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLV 87
+P D +WHF+GHLQSNKAKTL+ VP L M+E V + K+AN L A GR +PL V+V
Sbjct: 77 MPPDTRWHFIGHLQSNKAKTLVKAVPGLAMIETVDSVKLANRLADACVEAGRVEPLGVMV 136
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
NTSGE SK G++P++ + H+ C P L F GLMTIGMPDYTS PENF L R
Sbjct: 137 --NTSGEASKHGVEPNAATALASHIVNECAPALAFRGLMTIGMPDYTSRPENFELLAKAR 194
Query: 147 A---EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ +VC ALG+ + ELSMGMSGD+E AI MGS +VR+GSTIFG R+Y +K+
Sbjct: 195 STRDDVCDALGLDATEVELSMGMSGDYESAISMGSDNVRVGSTIFGARDYGEKK 248
>gi|11359716|pir||T46722 conserved hypothetical protein [imported] - Leishmania major
Length = 389
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKPLKVLV 87
LPED WHF+GHLQSNK K LL GVPNL +V+ + +E +A+ +++ G +PL+V +
Sbjct: 219 LPEDTVWHFIGHLQSNKVKELLEGVPNLRVVQTIDSENLASKVNEGCRKYRGGRPLEVYI 278
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEE+KSG +P + + + +++ CP L+ GLMTIGMPDYTS PENF L CR
Sbjct: 279 QVNTSGEETKSGTEPGEATVTLAKYIADECPLLQLKGLMTIGMPDYTSRPENFECLTKCR 338
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+V + + MA + ELSMGMSGD+ AI MGST+VR+G++IFG R Y KQ
Sbjct: 339 EDVAQPVQMAPEDLELSMGMSGDYVNAIRMGSTAVRVGTSIFGQRYYPHKQ 389
>gi|340053591|emb|CCC47884.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 255
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKPLKVL 86
L EDI+WHF+GHLQSNK + LL GV L +V V +A LD + G +PL V
Sbjct: 80 QLAEDIRWHFIGHLQSNKVRDLLEGVKGLTLVHTVDRTSLATKLDDGCTRYRGGRPLDVY 139
Query: 87 VQVNTSGEESKSGIDPS-SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
+QVNTSGE +KSG++P S + + + V +CPNL SGLMTIGMPDYTS PE+F TLL C
Sbjct: 140 LQVNTSGEATKSGVEPGISTVELAQFVASKCPNLRLSGLMTIGMPDYTSRPESFETLLRC 199
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
RAEV A G+ LSMGMS D+E AI MGST VR+GS IFG R Y K
Sbjct: 200 RAEVAAATGVDVSTLGLSMGMSNDYENAIMMGSTIVRVGSGIFGQRHYPPK 250
>gi|154338034|ref|XP_001565243.1| putative alanine racemase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062290|emb|CAM36679.1| putative alanine racemase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 245
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 122/172 (70%), Gaps = 4/172 (2%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL--GRKPLKVL 86
LP D WHF+GHLQSNK + LL GVPNL +++ + ++K+AN +++ GR L+V
Sbjct: 75 LPGDTVWHFIGHLQSNKVRELLEGVPNLHVIQTIDSDKLANKVNEGCKKYRSGRS-LEVY 133
Query: 87 VQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
+QVNTSGEE+KSG +P + + + +++ CP L+ GLMTIGMPDYTS PENF L C
Sbjct: 134 IQVNTSGEETKSGTEPGEATVALAKYIVGECPLLQLKGLMTIGMPDYTSRPENFECLTKC 193
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
R EV +A+ +A + ELSMGMSGD+ AI MGST+VR+GS+IFG R Y KQ
Sbjct: 194 REEVAQAVQVAPEDLELSMGMSGDYVNAIRMGSTTVRVGSSIFGQRYYPPKQ 245
>gi|116783162|gb|ABK22817.1| unknown [Picea sitchensis]
Length = 218
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 97/111 (87%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WHF+GHLQSNKAK ++ GVPNL MVE V + K+ANHLD+AVS++GRKPLKVLVQ
Sbjct: 70 LPTDIQWHFIGHLQSNKAKAVIAGVPNLYMVESVDSSKVANHLDRAVSSIGRKPLKVLVQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENF 139
VNTSGEESK G++PS C+ + +HV+ +CPNLEFSGLMTIGM DY+S PENF
Sbjct: 130 VNTSGEESKYGVEPSECVELAKHVKFQCPNLEFSGLMTIGMLDYSSRPENF 180
>gi|407394171|gb|EKF26821.1| alanine racemase, putative [Trypanosoma cruzi marinkellei]
Length = 252
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 120/170 (70%), Gaps = 2/170 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVLV 87
LP+DI+WHF+GHLQSNK K LL GV L +V+ V +EK+A L+ V+ G + L V +
Sbjct: 75 LPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLAAKLNTGCVTYRGGRSLNVYI 134
Query: 88 QVNTSGEESKSGIDPSS-CLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEESKSG +P S + + ++++ C +L +G+MTIGMPDYTS PENF LL R
Sbjct: 135 QVNTSGEESKSGTEPGSPTVELAQYIQEHCKHLNVTGVMTIGMPDYTSRPENFTCLLQVR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
V +AL + ED LSMGM+GDFE AI+MGST VR+G+ +FG R Y K
Sbjct: 195 EAVARALSVPEDSLALSMGMTGDFENAIKMGSTVVRVGTALFGTRYYPPK 244
>gi|343474968|emb|CCD13524.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 258
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 118/172 (68%), Gaps = 4/172 (2%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL--GRKPLKVL 86
LP+DI+WHF+GHLQSNK K LL V L +V+ + +A L+ + GR PL V
Sbjct: 83 LPDDIQWHFIGHLQSNKVKELLSTVKGLQLVQSIDTISLAQKLENGCTAYRDGR-PLDVY 141
Query: 87 VQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
VQVNTSGEE+KSG++P + + + +H+ RCP+L GLMTIGMPDYTS PENF LL C
Sbjct: 142 VQVNTSGEETKSGVEPGEAAVKLAQHIVSRCPHLRLRGLMTIGMPDYTSRPENFECLLRC 201
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
R E+ ++L + + LSMGMSGD+E AI MG+T VR+G+ +FG R Y K+
Sbjct: 202 RDEMVRSLDLNPETLALSMGMSGDYENAIRMGATVVRVGTGLFGQRYYPPKE 253
>gi|342180952|emb|CCC90429.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 258
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 113/171 (66%), Gaps = 2/171 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLV 87
LP+DI+WHF+GHLQSNK K LL V L +V+ + +A L +PL V V
Sbjct: 83 LPDDIQWHFIGHLQSNKVKELLSTVKGLQLVQSIDTISLAQKLKTVARRTATGRPLDVYV 142
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEE+KS ++P + + + +H+ CP+L GLMTIGMPDYTS PENF LL CR
Sbjct: 143 QVNTSGEETKSVVEPGEAAVKLAQHIVSSCPHLRLRGLMTIGMPDYTSRPENFECLLRCR 202
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
E+ ++L + + LSMGMSGD+E AI MG+T VR+G+ +FG R Y K+
Sbjct: 203 DEIARSLDLNPETLALSMGMSGDYENAIRMGATVVRVGTGLFGQRYYPPKE 253
>gi|348687058|gb|EGZ26872.1| hypothetical protein PHYSODRAFT_348828 [Phytophthora sojae]
Length = 234
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+D+KWH++GH+QSNKAK L+ VPNL +VE V + KIAN L+KA + L V+VQ
Sbjct: 67 LPKDVKWHYIGHVQSNKAKPLVRDVPNLFVVETVDSIKIANALNKASGEFRSEKLNVMVQ 126
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTS EE KSGID + + +H+ C +L +GLMTIG T T E F L+ CR
Sbjct: 127 VNTSEEEQKSGIDADGSVELAQHIVSSCEHLNLTGLMTIGRYGDT-TSECFDRLVACRKR 185
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
V +A+G AE +LSMGMSGDFE AI GST VR+GSTIFG R YA K+
Sbjct: 186 VAEAIGKAETDLDLSMGMSGDFELAISCGSTHVRVGSTIFGARNYANKE 234
>gi|301123513|ref|XP_002909483.1| proline synthetase co-transcribed bacterial protein [Phytophthora
infestans T30-4]
gi|262100245|gb|EEY58297.1| proline synthetase co-transcribed bacterial protein [Phytophthora
infestans T30-4]
Length = 234
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 114/169 (67%), Gaps = 1/169 (0%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DIKWH++GH+QSNKAK L+ VPNL +VE V + KIAN L+KA + L V+VQ
Sbjct: 67 LPADIKWHYIGHVQSNKAKPLVRDVPNLFVVETVDSIKIANALNKASGEFRTEKLNVMVQ 126
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTS EE KSGID + + H+ C +L +GLMTIG T T E F L+ CR +
Sbjct: 127 VNTSEEEQKSGIDTDGSVELARHIVASCEHLNLTGLMTIGRYGDT-TSECFDRLVACRKK 185
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
V +A+G E + LSMGMSGDFE AI GST VR+GSTIFG R YAKK+
Sbjct: 186 VAEAIGKTETELALSMGMSGDFELAISCGSTHVRVGSTIFGARNYAKKE 234
>gi|427787261|gb|JAA59082.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 247
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DIKWHF+G LQSNK +PNL MVE + ++K A+ L+ A + GR PL V+VQVNT
Sbjct: 81 DIKWHFIGRLQSNKVPKF-PKIPNLFMVETLESQKTAHALNNAWAASGRSPLNVMVQVNT 139
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRTLLNCRAEV 149
SGEE K+GI+P +V+ + CP+L+F+GLMTIGM +Y + N F L C+ E+
Sbjct: 140 SGEEQKNGIEPKDAGQLVKFIVGECPSLKFAGLMTIGMAEYDKSGPNPDFLCLAKCKEEL 199
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
CK LG + ELSMGMSGDFE+AI MGST+VR+GSTIFG R Y +K
Sbjct: 200 CKELGFSASDVELSMGMSGDFEEAIRMGSTNVRVGSTIFGHRNYPQK 246
>gi|326436868|gb|EGD82438.1| alanine racemase [Salpingoeca sp. ATCC 50818]
Length = 298
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 124/181 (68%), Gaps = 9/181 (4%)
Query: 23 FIDKYN---LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG 79
++K N +PEDI+WHF+G LQSNK+ TL V NL +VE V +EK+A L++A +
Sbjct: 118 LVEKSNDPRVPEDIEWHFIGRLQSNKSNTL-ARVKNLKVVETVASEKLARTLNRAFAEHD 176
Query: 80 RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT----ST 135
PL+V +QVNTSGEE+K G++PS C + + C +L+ +GLMTIGM + + T
Sbjct: 177 -APLRVFMQVNTSGEENKGGVEPSDCAALAAFIANECDHLQLAGLMTIGMLNRSLKTDDT 235
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+F TL++CR V +A+G+ D ELSMGMS DFE AIEMGST+VR+GSTIFG R Y
Sbjct: 236 NEDFETLVSCRGRVAEAIGVDADALELSMGMSSDFEHAIEMGSTNVRVGSTIFGARHYPP 295
Query: 196 K 196
K
Sbjct: 296 K 296
>gi|410208928|gb|JAA01683.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410255812|gb|JAA15873.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410290778|gb|JAA23989.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410290780|gb|JAA23990.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410350821|gb|JAA42014.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
Length = 275
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 255
>gi|158255706|dbj|BAF83824.1| unnamed protein product [Homo sapiens]
Length = 275
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 255
>gi|407867709|gb|EKG08627.1| alanine racemase, putative [Trypanosoma cruzi]
Length = 252
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 117/165 (70%), Gaps = 2/165 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVLV 87
LP+DI+WHF+GHLQSNK K LL GV L +V+ V +EK+A L+ V+ G + L V +
Sbjct: 75 LPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLATKLNNGCVTYRGGRSLNVYI 134
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEESKSG +P + + + ++++ C +L +G+MTIGMPDYTS PENF LL R
Sbjct: 135 QVNTSGEESKSGTEPGNQTVELAQYIQEHCKHLNVAGVMTIGMPDYTSRPENFECLLQVR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
V +AL + D LSMGM+GDFE AI+MGST VR+G+ +FG R
Sbjct: 195 EAVARALSVPADSLALSMGMTGDFENAIKMGSTVVRVGTALFGKR 239
>gi|6005842|ref|NP_009129.1| proline synthase co-transcribed bacterial homolog protein [Homo
sapiens]
gi|12230426|sp|O94903.1|PROSC_HUMAN RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|4126978|dbj|BAA36842.1| Proline synthetase associated [Homo sapiens]
gi|12052758|emb|CAB66551.1| hypothetical protein [Homo sapiens]
gi|15147391|gb|AAH12334.1| Proline synthetase co-transcribed homolog (bacterial) [Homo
sapiens]
gi|49065490|emb|CAG38563.1| PROSC [Homo sapiens]
gi|190689559|gb|ACE86554.1| proline synthetase co-transcribed homolog (bacterial) protein
[synthetic construct]
gi|190690923|gb|ACE87236.1| proline synthetase co-transcribed homolog (bacterial) protein
[synthetic construct]
Length = 275
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 255
>gi|71657511|ref|XP_817270.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882450|gb|EAN95419.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 252
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 117/165 (70%), Gaps = 2/165 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVLV 87
LP+DI+WHF+GHLQSNK K LL GV L +V+ V +EK+A L+ V+ G + L V +
Sbjct: 75 LPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLATKLNNGCVTYRGGRSLNVYI 134
Query: 88 QVNTSGEESKSGIDPSS-CLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEESKSG +P + + + ++++ C +L +G+MTIGMPDYTS PENF LL R
Sbjct: 135 QVNTSGEESKSGTEPGNPTVELAQYIQEHCKHLNVAGVMTIGMPDYTSRPENFECLLQVR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
V +AL + D LSMGM+GDFE AI+MGST VR+G+ +FG R
Sbjct: 195 EAVARALSLPADSLALSMGMTGDFENAIKMGSTVVRVGTALFGKR 239
>gi|119583766|gb|EAW63362.1| proline synthetase co-transcribed homolog (bacterial), isoform
CRA_c [Homo sapiens]
Length = 236
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 49 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQIN 107
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 108 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 167
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 168 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 216
>gi|193785623|dbj|BAG51058.1| unnamed protein product [Homo sapiens]
Length = 235
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 48 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQIN 106
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 107 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 166
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 167 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 215
>gi|426359342|ref|XP_004046935.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Gorilla gorilla gorilla]
Length = 310
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 123 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 181
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 182 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 241
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 242 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 290
>gi|332825856|ref|XP_001169823.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein isoform 1 [Pan troglodytes]
gi|397521407|ref|XP_003830788.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Pan paniscus]
Length = 310
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 123 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 181
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 182 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 241
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 242 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 290
>gi|119583765|gb|EAW63361.1| proline synthetase co-transcribed homolog (bacterial), isoform
CRA_b [Homo sapiens]
gi|119583768|gb|EAW63364.1| proline synthetase co-transcribed homolog (bacterial), isoform
CRA_b [Homo sapiens]
Length = 310
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 123 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQIN 181
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 182 TSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 241
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 242 ELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 290
>gi|71652235|ref|XP_814779.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879780|gb|EAN92928.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 252
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 117/165 (70%), Gaps = 2/165 (1%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVLV 87
LP+DI+WHF+GHLQSNK K LL GV L +V+ V +EK+A L+ V+ G + L V +
Sbjct: 75 LPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLATKLNNGCVTYRGGRSLNVYI 134
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
QVNTSGEESKSG +P + + + ++++ C +L +G+MTIGMPDYTS PENF LL R
Sbjct: 135 QVNTSGEESKSGTEPGNQTVELAQYIQEHCKHLNVAGVMTIGMPDYTSRPENFECLLQVR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
V +AL + D LSMGM+GDFE A++MGST VR+G+ +FG R
Sbjct: 195 EAVARALSVPADSLALSMGMTGDFENAVKMGSTIVRVGTALFGKR 239
>gi|334312588|ref|XP_001381845.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Monodelphis domestica]
Length = 275
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLIA-VPNLYMLETVDSVKLADKVNNSWQKRGSSERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + V+H+ +CPNLEF GLMTIG D + P +F+ LL R
Sbjct: 147 TSGEESKHGLPPSETMATVQHINAKCPNLEFVGLMTIGSFGHDLSKGPNPDFQALLCLRK 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ LG+ DQ ELSMGMS DF+ AIEMGST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCEKLGLPIDQVELSMGMSMDFQHAIEMGSTNVRIGSTIFGERDYSKK 255
>gi|426256570|ref|XP_004021913.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Ovis aries]
Length = 256
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ A G + LKV+VQ+N
Sbjct: 69 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADRVNSAWQKKGSPERLKVMVQIN 127
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ P+ +VEH+ +CP LEF GLMTIG D + P +F+ LL+ R
Sbjct: 128 TSGEESKHGLPPAETAALVEHINAKCPRLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLRE 187
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ LG A +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 188 ELCRKLGAAPEQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 236
>gi|440801337|gb|ELR22357.1| hypothetical protein ACA1_253440 [Acanthamoeba castellanii str.
Neff]
Length = 294
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK-PLKVL 86
LPE IKW F+GHLQSNK K +L VPNLD VE V + K+A LDKA + GR PL +L
Sbjct: 128 QLPEGIKWRFIGHLQSNKCKQVLS-VPNLDCVETVDSVKLATALDKAAAAAGRTTPLSIL 186
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
VQ+NTSGEESKSG DP + +V+ +R +C L F+GLMTIG D P +FR L+ CR
Sbjct: 187 VQINTSGEESKSGADPEKVVDVVKEIREKCSRLHFAGLMTIGRFDEHPEP-DFRKLVECR 245
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+VC LG+ +Q ELSMGMS DF+ AIE GST+VR+GS+IFG R Y K
Sbjct: 246 KKVCDELGLPVEQVELSMGMSHDFKIAIEEGSTNVRVGSSIFGARVYHK 294
>gi|241598580|ref|XP_002404760.1| proline synthetase associated protein, putative [Ixodes scapularis]
gi|215500480|gb|EEC09974.1| proline synthetase associated protein, putative [Ixodes scapularis]
Length = 248
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 117/181 (64%), Gaps = 10/181 (5%)
Query: 25 DKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
+K N PE +IKWHF+G LQ NK L VPNL MVE + + K A L+ +
Sbjct: 68 EKANSPEIQTACPEIKWHFIGRLQRNKVAKL-AKVPNLFMVETLESSKTAMALNSCWALN 126
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP-- 136
G PL V+VQVNTSGEE K+G++P +VE V CPNL+FSGLMTIGM +Y +T
Sbjct: 127 GLPPLNVMVQVNTSGEEQKNGVEPKEAASLVEFVLKECPNLKFSGLMTIGMAEYDATAGP 186
Query: 137 -ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+F +LL R E+CK L + ELSMGMS D+E+A+ MGST+VR+GSTIFGPR Y
Sbjct: 187 NPDFVSLLKSREELCKELNLDVGAVELSMGMSADYEEAVRMGSTNVRVGSTIFGPRNYPA 246
Query: 196 K 196
K
Sbjct: 247 K 247
>gi|16930823|ref|NP_473398.1| proline synthase co-transcribed bacterial homolog protein isoform a
[Mus musculus]
gi|12230502|sp|Q9Z2Y8.1|PROSC_MOUSE RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|4126980|dbj|BAA36843.1| Proline synthetase associated [Mus musculus]
gi|26328127|dbj|BAC27804.1| unnamed protein product [Mus musculus]
gi|148700851|gb|EDL32798.1| proline synthetase co-transcribed [Mus musculus]
Length = 274
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG-RKPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G +PLKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ PS + +VEH++ CP+LEF GLMTIG D + P +F+ LL R
Sbjct: 147 TSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRR 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ LG+ +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCEKLGIPVEQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
>gi|431902264|gb|ELK08765.1| Proline synthetase co-transcribed bacterial like protein [Pteropus
alecto]
Length = 269
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 82 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQKKGSSERLKVMVQIN 140
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 141 TSGEESKHGLLPSETVAMVEHINTKCPSLEFVGLMTIGSFGHDLSQGPNPDFQMLLSLRE 200
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 201 ELCKKLNITADQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 249
>gi|299472696|emb|CBN79867.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 252
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 118/179 (65%), Gaps = 8/179 (4%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGR 80
IDK +P+D+ WHF+GHLQSNKAK L+ GVPNL ++E + K+AN L A VS+ +
Sbjct: 76 LIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERK 135
Query: 81 KPLKVLVQVNTSGEESKSGI---DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+PL V +Q++TSGE+SK+GI D +CL + H++ CP LE GLMTIG P E
Sbjct: 136 RPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAP---GDME 192
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
F L CR V LGM ELSMGMSGD+E+AI GST+VR+GSTIFG R Y K
Sbjct: 193 CFDRLNACRDAVAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 251
>gi|442749673|gb|JAA66996.1| Putative proline synthetase associated protein [Ixodes ricinus]
Length = 248
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 10/181 (5%)
Query: 25 DKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
+K N PE +IKWHF+G LQ NK L +PNL MVE + + K A L+ +
Sbjct: 68 EKANNPEIQTACPEIKWHFIGRLQRNKVAKL-AKIPNLFMVETLESSKTAMALNSCWALN 126
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP-- 136
G PL V+VQVNTSGEE K+G++P +VE V CPNL+FSGLMTIGM +Y +T
Sbjct: 127 GLPPLNVMVQVNTSGEEQKNGVEPKEAASLVEFVLKECPNLKFSGLMTIGMAEYDATAGP 186
Query: 137 -ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+F +LL R E+CK L + ELSMGMS D+E+A+ MGST+VR+GSTIFGPR Y
Sbjct: 187 NPDFVSLLKSREELCKELNLDVGAVELSMGMSADYEEAVRMGSTNVRVGSTIFGPRNYPA 246
Query: 196 K 196
K
Sbjct: 247 K 247
>gi|390473684|ref|XP_003734640.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein isoform 2 [Callithrix jacchus]
Length = 275
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLPPSETIAIVEHINTNCPSLEFVGLMTIGSVGHDLSQGPNPDFQLLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLSIPADQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
>gi|296221991|ref|XP_002756996.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein isoform 1 [Callithrix jacchus]
Length = 236
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 49 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 107
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 108 TSGEESKHGLPPSETIAIVEHINTNCPSLEFVGLMTIGSVGHDLSQGPNPDFQLLLSLRE 167
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 168 ELCKKLSIPADQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 216
>gi|52353469|gb|AAU44036.1| unknown protein [Oryza sativa Japonica Group]
Length = 191
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 106/175 (60%), Gaps = 53/175 (30%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK + LPEDI+WHF+G+LQSNKA+ LL GVPNLDMVE V ++KIAN LD+ V++LGRK
Sbjct: 68 LIDKASQLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRK 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQ
Sbjct: 128 PLKVLVQ----------------------------------------------------A 135
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L NCR EVCK LG+ E+QCELSMGMS DFEQAIEMGST+VR+GSTIFG REY KK
Sbjct: 136 LANCRKEVCKELGIPEEQCELSMGMSADFEQAIEMGSTNVRVGSTIFGAREYPKK 190
>gi|444511199|gb|ELV09837.1| Proline synthase co-transcribed bacterial like protein [Tupaia
chinensis]
Length = 223
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 36 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 94
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEE K G+ PS +VEH+ RCP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 95 TSGEERKHGLHPSETAAVVEHINARCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLRE 154
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L +A Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 155 ELCKKLSVAPGQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 203
>gi|57900473|dbj|BAD87885.1| alanine racemase-like [Oryza sativa Japonica Group]
Length = 192
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 105/176 (59%), Gaps = 53/176 (30%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F+ K LPEDI+WHF+GHLQSNK K+LL VPNL MVEGV N KIANHLD+AVS+LGR
Sbjct: 68 FVTKAPQLPEDIRWHFIGHLQSNKVKSLLAAVPNLHMVEGVDNVKIANHLDRAVSSLGRD 127
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
PLKVLVQ
Sbjct: 128 PLKVLVQ----------------------------------------------------A 135
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L+NC+ EVCKA+ M +Q ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY K+
Sbjct: 136 LVNCKLEVCKAIDMPAEQFELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYPNKK 191
>gi|440897046|gb|ELR48819.1| Proline synthase co-transcribed bacterial-like protein, partial
[Bos grunniens mutus]
Length = 241
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ A G + LKV+VQ+N
Sbjct: 56 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQIN 114
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE SK G+ P+ +VEH+ RCP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 115 TSGEASKHGLPPAETAALVEHINARCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLRE 174
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ LG +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 175 ELCRKLGAPPEQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 223
>gi|354472073|ref|XP_003498265.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cricetulus griseus]
Length = 275
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQKKGSTERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ S + +VEH++ CPNLEF GLMTIG D + P +F+ LL R
Sbjct: 147 TSGEESKHGLPSSEAIAVVEHIKASCPNLEFVGLMTIGSFGHDLSQGPNPDFQMLLRLRQ 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L + DQ ELSMGMS DF+ AIE+GST+VR+GSTIFG R+Y+KK
Sbjct: 207 ELCEKLNIPVDQVELSMGMSADFQHAIEVGSTNVRVGSTIFGERDYSKK 255
>gi|403294362|ref|XP_003938159.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Saimiri boliviensis boliviensis]
Length = 275
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + IVEH+ +CP+LEF GLMTIG D + P +F+ L + R
Sbjct: 147 TSGEESKHGLPPSETVAIVEHINTKCPSLEFVGLMTIGSVGHDLSQGPNPDFQLLFSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLNIRADQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
>gi|344238538|gb|EGV94641.1| Proline synthetase co-transcribed bacterial-like protein
[Cricetulus griseus]
Length = 223
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 36 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQKKGSTERLKVMVQIN 94
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ S + +VEH++ CPNLEF GLMTIG D + P +F+ LL R
Sbjct: 95 TSGEESKHGLPSSEAIAVVEHIKASCPNLEFVGLMTIGSFGHDLSQGPNPDFQMLLRLRQ 154
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L + DQ ELSMGMS DF+ AIE+GST+VR+GSTIFG R+Y+KK
Sbjct: 155 ELCEKLNIPVDQVELSMGMSADFQHAIEVGSTNVRVGSTIFGERDYSKK 203
>gi|357605973|gb|EHJ64853.1| proline synthetase co-transcribed bacterial-like protein [Danaus
plexippus]
Length = 242
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 121/182 (66%), Gaps = 12/182 (6%)
Query: 25 DKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
DK + PE DI WHF+GHLQ+NK LLG P L MVE V ++K+A++L+K
Sbjct: 62 DKASDPEILEKCKDIHWHFIGHLQTNKINRLLGS-PGLYMVETVHSQKLADNLNKQWPKY 120
Query: 79 GR--KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
+ + LKV+VQVNTSGE+ KSG++P+ + +VEHV C NL+F GLMTIG DY T
Sbjct: 121 MKADEKLKVMVQVNTSGEDVKSGVEPAQAVSLVEHVIKNCENLDFKGLMTIGQYDYDITK 180
Query: 137 ---ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+F TL +CR EVC+ L + ELSMGMS DFE AIE+G+T+VR+GSTIFG R
Sbjct: 181 GPNPDFLTLASCRNEVCEKLRLNIKDVELSMGMSSDFEHAIELGATTVRVGSTIFGARPV 240
Query: 194 AK 195
K
Sbjct: 241 KK 242
>gi|402877995|ref|XP_003902692.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Papio anubis]
Length = 310
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 123 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 181
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 182 TSGEESKHGLPPSETIAVVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 241
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 242 ELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 290
>gi|311272381|ref|XP_003133417.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 2 [Sus scrofa]
Length = 275
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQKKGSPERLKVMVQVN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEHV+ +CP+LEF GLMTIG D + P +F+ L++ R
Sbjct: 147 TSGEESKHGLLPSETVAMVEHVKAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLVSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCQKLHIPVDQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
>gi|432099971|gb|ELK28865.1| Proline synthase co-transcribed bacterial like protein [Myotis
davidii]
Length = 269
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 82 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 140
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ L++ R
Sbjct: 141 TSGEESKHGLLPSETVAMVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQMLVSLRE 200
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 201 ELCKKLNIPTDQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 249
>gi|157823503|ref|NP_001100790.1| proline synthase co-transcribed bacterial homolog protein [Rattus
norvegicus]
gi|149057846|gb|EDM09089.1| proline synthetase co-transcribed (predicted) [Rattus norvegicus]
Length = 275
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E + + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETIDSVKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ PS + +VEH++ CPNLEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEDSKHGLLPSETVAVVEHIKASCPNLEFVGLMTIGSFGHDLSQGPNPDFQRLLSLRQ 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ LG+ +Q ELSMGMS DF+ AIE+GST++R+GSTIFG R+Y+KK
Sbjct: 207 ELCEKLGLPVEQVELSMGMSVDFQHAIEVGSTNIRVGSTIFGERDYSKK 255
>gi|410956410|ref|XP_003984835.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Felis catus]
Length = 275
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQVN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLLPSETVAMVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQALLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLNVPTEQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
>gi|311272383|ref|XP_003133416.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 1 [Sus scrofa]
Length = 234
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 47 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQKKGSPERLKVMVQVN 105
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEHV+ +CP+LEF GLMTIG D + P +F+ L++ R
Sbjct: 106 TSGEESKHGLLPSETVAMVEHVKAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLVSLRE 165
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 166 ELCQKLHIPVDQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 214
>gi|355697864|gb|EHH28412.1| Proline synthase co-transcribed bacterial-like protein [Macaca
mulatta]
gi|355779627|gb|EHH64103.1| Proline synthase co-transcribed bacterial-like protein [Macaca
fascicularis]
gi|380788997|gb|AFE66374.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
Length = 275
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLPPSETIAVVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGS IFG R+Y+KK
Sbjct: 207 ELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSIIFGERDYSKK 255
>gi|281346889|gb|EFB22473.1| hypothetical protein PANDA_005479 [Ailuropoda melanoleuca]
Length = 273
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 119/172 (69%), Gaps = 11/172 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK----PLKVLV 87
+IKWHF+GHLQ L+ VPNL M+E V + K+A DK S+ +K LKV+V
Sbjct: 88 EIKWHFIGHLQKQNVNKLIA-VPNLFMLETVDSVKLA---DKVNSSWQKKDSPEKLKVMV 143
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLN 144
QVNTSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+
Sbjct: 144 QVNTSGEESKHGLLPSETVAVVEHINTKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLS 203
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
R E+C L + DQ ELSMGMS DF+ AIE+GST+VR+GSTIFG R+Y+KK
Sbjct: 204 LREELCAKLNVPTDQVELSMGMSADFQHAIEVGSTNVRVGSTIFGERDYSKK 255
>gi|197101691|ref|NP_001126869.1| proline synthase co-transcribed bacterial homolog protein [Pongo
abelii]
gi|75041031|sp|Q5R4Z1.1|PROSC_PONAB RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|55732977|emb|CAH93175.1| hypothetical protein [Pongo abelii]
Length = 275
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 120/173 (69%), Gaps = 5/173 (2%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVL 86
+L +IKWHF+GHLQ L+ VPNL ++E V + K+A ++ + G + LKV+
Sbjct: 84 SLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVM 142
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLL 143
VQ+NTSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL
Sbjct: 143 VQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLL 202
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ R E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGS IFG R+Y+KK
Sbjct: 203 SLREELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSMIFGERDYSKK 255
>gi|395507452|ref|XP_003758038.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Sarcophilus harrisii]
Length = 330
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ + L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 143 EIKWHFIGHLQKHNVNKLIA-VPNLYMLETVDSVKLADKVNNSWQKKGSPERLKVMVQIN 201
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + VEH++ +CP+LEF GLMTIG D P +F+ LL+ R
Sbjct: 202 TSGEESKHGLPPSETVATVEHIKAKCPSLEFVGLMTIGSFGHDLNQGPNPDFQALLSLRK 261
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 262 ELCEKLSIPIDQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 310
>gi|301763705|ref|XP_002917283.1| PREDICTED: LOW QUALITY PROTEIN: proline synthase co-transcribed
bacterial homolog protein-like [Ailuropoda melanoleuca]
Length = 305
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 119/172 (69%), Gaps = 11/172 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK----PLKVLV 87
+IKWHF+GHLQ L+ VPNL M+E V + K+A DK S+ +K LKV+V
Sbjct: 118 EIKWHFIGHLQKQNVNKLIA-VPNLFMLETVDSVKLA---DKVNSSWQKKDSPEKLKVMV 173
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLN 144
QVNTSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+
Sbjct: 174 QVNTSGEESKHGLLPSETVAVVEHINTKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLS 233
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
R E+C L + DQ ELSMGMS DF+ AIE+GST+VR+GSTIFG R+Y+KK
Sbjct: 234 LREELCAKLNVPTDQVELSMGMSADFQHAIEVGSTNVRVGSTIFGERDYSKK 285
>gi|77735663|ref|NP_001029529.1| proline synthase co-transcribed bacterial homolog protein [Bos
taurus]
gi|115311845|sp|Q3T0G5.1|PROSC_BOVIN RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|74267697|gb|AAI02406.1| Proline synthetase co-transcribed homolog (bacterial) [Bos taurus]
gi|296472322|tpg|DAA14437.1| TPA: proline synthetase co-transcribed bacterial homolog protein
[Bos taurus]
Length = 273
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ A G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE SK G+ P+ +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ LG +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCRKLGAPPEQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
>gi|383415499|gb|AFH30963.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
gi|383415501|gb|AFH30964.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
gi|384939912|gb|AFI33561.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
Length = 275
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSLKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLPPSETIAVVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGS IFG R+Y+KK
Sbjct: 207 ELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSIIFGERDYSKK 255
>gi|196015285|ref|XP_002117500.1| hypothetical protein TRIADDRAFT_61518 [Trichoplax adhaerens]
gi|190580029|gb|EDV20116.1| hypothetical protein TRIADDRAFT_61518 [Trichoplax adhaerens]
Length = 254
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 111/163 (68%), Gaps = 6/163 (3%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVNT 91
IKWHF+GHLQSNK K L +PNLD VE V ++K+A+ L+KA + G+ + L ++VQVNT
Sbjct: 93 IKWHFIGHLQSNKCKKL-AAIPNLDTVETVDSKKLADCLNKAWESAGKLEQLNIMVQVNT 151
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM---PDYTSTPENFRTLLNCRAE 148
S EE+KSG P C+ IV+HV RC L F GLMTIG D S P+ FR L CR
Sbjct: 152 SQEENKSGCPPDDCVTIVDHVLKRCKKLNFVGLMTIGQLGRHDADSNPD-FRLLSECRKT 210
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
V +G+ D ELSMGMS DFE AIEMGSTSVR+GS IFG R
Sbjct: 211 VSDKMGIPIDALELSMGMSQDFEHAIEMGSTSVRVGSAIFGSR 253
>gi|346470373|gb|AEO35031.1| hypothetical protein [Amblyomma maculatum]
Length = 247
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 120/182 (65%), Gaps = 9/182 (4%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
++K N PE IKWHF+G LQSNK + L +PNL MVE + ++K A+ L+ A +
Sbjct: 66 LVEKANNPEILRDCPQIKWHFIGRLQSNKV-SKLPKIPNLFMVETLESQKTADALNSAWT 124
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
+ G PL V+VQVNTSGEE K+G++P +V+ + CP+L+F+GLMTIGM ++ +
Sbjct: 125 SSGLPPLNVMVQVNTSGEEQKNGVEPRGASQLVKFLVKECPSLKFAGLMTIGMAEHENIR 184
Query: 137 EN--FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
N F L CR +VC LG+ ELSMGMS DFE+AI MGST+VR+GSTIFG R Y
Sbjct: 185 PNPDFLCLAKCREQVCSELGLDVSDVELSMGMSADFEEAIRMGSTNVRVGSTIFGQRNYG 244
Query: 195 KK 196
K
Sbjct: 245 PK 246
>gi|149742615|ref|XP_001492309.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Equus caballus]
Length = 275
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LK++VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGSPERLKIMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + VEH++ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEESKHGLLPSETVATVEHIKAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + +Q ELSMGMS DF+ AIE+GST+VRIGSTIFG R+++KK
Sbjct: 207 ELCKKLSIPTEQVELSMGMSLDFQHAIEVGSTNVRIGSTIFGERDHSKK 255
>gi|428177707|gb|EKX46585.1| hypothetical protein GUITHDRAFT_107372 [Guillardia theta CCMP2712]
Length = 302
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 110/164 (67%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP DIKWHF+GHLQSNKAK L+ GVPNL MVE V + K+AN LDKA + R L+V++
Sbjct: 67 QLPSDIKWHFIGHLQSNKAKMLVQGVPNLFMVESVDSSKLANQLDKACDAVKRDLLQVML 126
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVNTS EESKSG + I H+ C L+ +GLMTIG + F+ L+ CR+
Sbjct: 127 QVNTSKEESKSGCEAEEAAAIASHIVNNCKRLKLAGLMTIGKLGDPNPEPYFKKLVECRS 186
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ K LG+ E LSMGMSGD+E AI MGS +VR+GSTIFG R
Sbjct: 187 MIAKELGVEESSLLLSMGMSGDYELAIRMGSNNVRVGSTIFGER 230
>gi|345305932|ref|XP_001513258.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Ornithorhynchus anatinus]
Length = 274
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ + L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 88 EIKWHFIGHLQKHNVNKLIT-VPNLFMLETVDSVKLADRVNSSWQKKGSPERLKVMVQVN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ P+ + VEH+ +CP+LEF GLMTIG D + P +F+ L++ R
Sbjct: 147 TSGEESKHGLLPADTVATVEHINTKCPSLEFVGLMTIGSFGHDLSQGPNPDFQMLVSLRK 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L M+ D ELSMGMS DF+ AIE+GST+VRIGSTIFG R+YAKK
Sbjct: 207 ELCEKLNMSTDSVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYAKK 255
>gi|297299225|ref|XP_001089087.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Macaca mulatta]
Length = 310
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 123 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSLKLADKVNSSWQKKGSPERLKVMVQIN 181
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 182 TSGEESKHGLPPSETIAVVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLRK 241
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGS IFG R+Y+KK
Sbjct: 242 ELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSIIFGERDYSKK 290
>gi|344281642|ref|XP_003412587.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Loxodonta africana]
Length = 275
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 5/170 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLIA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
+SGEE+K G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 SSGEENKHGLPPSETIAMVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLRK 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
E+CK L + D+ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLHLPTDKVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKKH 256
>gi|395847361|ref|XP_003796347.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Otolemur garnettii]
Length = 274
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE SK G+ PS L +VEH+ CP+LEF GLMTIG D T P +F+ LL+ R
Sbjct: 147 TSGEASKHGLPPSETLAVVEHINAECPSLEFVGLMTIGSFGHDLTQGPNPDFQVLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L +A Q ELSMGMS DF+ AIE+GST+VR+GSTIFG R+Y+KK
Sbjct: 207 ELCEKLHVAPGQVELSMGMSMDFQHAIEVGSTNVRVGSTIFGERDYSKK 255
>gi|449019568|dbj|BAM82970.1| probable proline synthetase associated protein [Cyanidioschyzon
merolae strain 10D]
Length = 269
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 112/170 (65%), Gaps = 4/170 (2%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKV 85
LP DI WHF+GHLQSNK +TLL VPNL VE V K+AN L++ + L P+ V
Sbjct: 102 QLPTDINWHFIGHLQSNKVRTLLS-VPNLWCVETVDRPKLANTLNRLMDELRPDGGPIPV 160
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
+VQVN SGE SK+GI+P++ +VEH+ CP L+ GLMTIG PD + P F+ L +
Sbjct: 161 MVQVNVSGEASKAGIEPAAAPELVEHILQACPRLKLLGLMTIGSPDPSPEPVAFQRLSHL 220
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
R ++ E ELSMGMS DFE A+ MGST+VRIGSTIFGPR Y +
Sbjct: 221 RDQIQDRFRFQEP-LELSMGMSDDFEAAVRMGSTNVRIGSTIFGPRVYPQ 269
>gi|417398232|gb|JAA46149.1| Putative proline synthetase co-transcribed protein [Desmodus
rotundus]
Length = 275
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E + + K+A+ ++ + G + LKV+VQ+N
Sbjct: 88 EIKWHFIGHLQKQNVSKLMA-VPNLFMLETLDSVKLADKVNSSWQKKGSPERLKVMVQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ L + R
Sbjct: 147 TSGEESKHGVLPSETVAMVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQMLSSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + DQ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+KK
Sbjct: 207 ELCKKLNIPTDQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
>gi|114051511|ref|NP_001040304.1| proline synthetase co-transcribed bacterial-like protein [Bombyx
mori]
gi|87248205|gb|ABD36155.1| proline synthetase co-transcribed bacterial-like protein [Bombyx
mori]
Length = 262
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 114/166 (68%), Gaps = 6/166 (3%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP--LKVLVQ 88
+DIKWHF+GHLQ+NK LLG P L MVE V +EK+A++L+K ++ L+V+VQ
Sbjct: 93 KDIKWHFIGHLQTNKINKLLGS-PGLFMVETVDSEKLADNLNKQWLKYRKEKERLRVMVQ 151
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---ENFRTLLNC 145
VNTSGE++KSG++P VEH+ CPNL+F GLMTIG DY T ++ L+ C
Sbjct: 152 VNTSGEQAKSGLEPLETTKAVEHILENCPNLDFQGLMTIGQYDYDITKGPNPDYLCLIKC 211
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R EVC+ L + ELSMGMS DF AIE+G+T+VR+GSTIFG R
Sbjct: 212 RQEVCEKLNLDIKDVELSMGMSSDFAHAIELGATTVRVGSTIFGAR 257
>gi|57097863|ref|XP_539969.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Canis lupus familiaris]
Length = 275
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSPERLKVMVQVN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 147 TSGEQSKHGLLPSETVSMVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+CK L + +Q ELSMGMS DF+ AIE+GST+VR+GSTIFG R+Y+KK
Sbjct: 207 ELCKKLSVPPEQVELSMGMSMDFQHAIEVGSTNVRVGSTIFGERDYSKK 255
>gi|355713742|gb|AES04772.1| proline synthetase co-transcribed-like protein [Mustela putorius
furo]
Length = 277
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 119/172 (69%), Gaps = 11/172 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP----LKVLV 87
+IKWHF+GHLQ L+ VPNL M+E V + K+A DK S+ +K LKV+V
Sbjct: 91 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLA---DKVNSSWQKKSSPERLKVMV 146
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLN 144
QVNTSGEESK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ LL+
Sbjct: 147 QVNTSGEESKHGLLPSETVAVVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLS 206
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
R E+CK L + +Q ELSMGMS DF+ AIE+GST+VR+GS IFG R+Y+KK
Sbjct: 207 LREELCKKLSIPTEQVELSMGMSMDFQHAIEVGSTNVRVGSIIFGERDYSKK 258
>gi|428186182|gb|EKX55033.1| hypothetical protein GUITHDRAFT_63073 [Guillardia theta CCMP2712]
Length = 238
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVL 86
+LPEDI+WHF+G LQSNKAK L+ GV NL++VE V + K A L+ A +S R PLK+
Sbjct: 70 SLPEDIQWHFIGMLQSNKAKQLVSGVKNLEVVESVHSAKTATALNNACMSAERRSPLKIY 129
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
+QV TSGEESKSG P + I +HV+ CP LE GLMTIG + F L CR
Sbjct: 130 IQVLTSGEESKSGCLPEEVIEIAQHVKSHCPALELKGLMTIGKLGDPNPEPYFALLRECR 189
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ ++L M E LSMGMSGDFE+AI GSTSVR+G++IFG R
Sbjct: 190 KKLAESLQMEETDLHLSMGMSGDFEKAIAAGSTSVRVGTSIFGER 234
>gi|224080861|ref|XP_002193974.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Taeniopygia guttata]
Length = 276
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 117/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
DIKWHF+GHLQ N L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 87 DIKWHFIGHLQKNNVNKLIA-VPNLFMLETVDSVKLADRVNSSWQKKGSSQKLKVMVQVN 145
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ P VEHV +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 146 TSGEDSKHGLPPGDTAAAVEHVINKCPSLEFVGLMTIGSIGHDLSKGPNPDFQVLLSVRQ 205
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
EVC+ L + D+ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+ K
Sbjct: 206 EVCEKLNLPLDKVELSMGMSTDFQHAIEVGSTNVRIGSTIFGERDYSSK 254
>gi|340508347|gb|EGR34066.1| hypothetical protein IMG5_024860 [Ichthyophthirius multifiliis]
Length = 230
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 112/168 (66%), Gaps = 6/168 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+GHLQSNK K +L VPNL ++E + + K+A + K N R LKVL+Q
Sbjct: 69 LPQDIKWHFIGHLQSNKIKQVL--VPNLYIIETIDSIKLAEKVQKICQNQNRN-LKVLIQ 125
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
+ S EESK GI+P + ++E + CPNLEFSGLMTIG + F+ L N R +
Sbjct: 126 IKISDEESKYGIEPENAYTLIEFIIKNCPNLEFSGLMTIGK---QGDVQAFQKLYNLRID 182
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ + ED ELSMGMS D++ AI+ GST VRIGSTIFG R+Y+K+
Sbjct: 183 ISNKFLLKEDNLELSMGMSADYQIAIQNGSTEVRIGSTIFGQRDYSKQ 230
>gi|167537654|ref|XP_001750495.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771035|gb|EDQ84709.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 122/199 (61%), Gaps = 6/199 (3%)
Query: 2 MLVTVALVKITYKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEG 61
+ VT+ + I + ++LL +D PEDI+WHF+GHLQ NK K L V L MVE
Sbjct: 12 LAVTLDVGTIDTIRLTMRLLVPVDNGGCPEDIEWHFIGHLQRNKVKQL-AAVQGLAMVET 70
Query: 62 VGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEF 121
V ++K+A+ L+K + R + VL+QVNTS EE+K G+ + + +H+ CP L
Sbjct: 71 VSSQKLADALNKTFAEQERT-VSVLIQVNTSREENKHGVLEDEVVAVAKHITASCPALRL 129
Query: 122 SGLMTIGMPDYTSTPE----NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMG 177
GLMTIG + + PE +F TL+ CRA V LG ++ ELSMGMS D+E AI G
Sbjct: 130 CGLMTIGNLEQSLAPEETNPDFETLVRCRAAVASELGRDAEELELSMGMSSDYETAIRQG 189
Query: 178 STSVRIGSTIFGPREYAKK 196
ST+VR+GSTIFG R YA K
Sbjct: 190 STNVRVGSTIFGARHYAPK 208
>gi|260826782|ref|XP_002608344.1| hypothetical protein BRAFLDRAFT_126227 [Branchiostoma floridae]
gi|229293695|gb|EEN64354.1| hypothetical protein BRAFLDRAFT_126227 [Branchiostoma floridae]
Length = 295
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 114/181 (62%), Gaps = 11/181 (6%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
DK + PE DI+WHF+GHLQ NK + G +PNL MVE V +EK+A ++ +
Sbjct: 72 LTDKASDPEIVGQLNDIRWHFIGHLQRNKVNKVTG-IPNLYMVETVDSEKLATAINASWE 130
Query: 77 NLGRKP-LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY--- 132
LGR LKV++QVNTS EE K G P + +HV CP+L+ G+MTIG+ DY
Sbjct: 131 KLGRTDRLKVMIQVNTSREEQKHGTSPEKVCDLYKHVVENCPHLQAVGIMTIGVYDYDLR 190
Query: 133 TSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+F+ LL CR +C+ + + ELSMGMS DFE AIE+GST++R+GSTIFG R+
Sbjct: 191 NGPNPDFQVLLECRTNICQTFNLQPEDVELSMGMSTDFEHAIEVGSTNIRVGSTIFGARQ 250
Query: 193 Y 193
Y
Sbjct: 251 Y 251
>gi|148232210|ref|NP_001091336.1| proline synthetase co-transcribed homolog [Xenopus laevis]
gi|125858539|gb|AAI29542.1| LOC100037173 protein [Xenopus laevis]
Length = 261
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 117/168 (69%), Gaps = 5/168 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
DIKWHF+GHLQ L+G VPNL ++E + + K+A+ ++ + G + LKV+VQVN
Sbjct: 80 DIKWHFIGHLQKTHINKLVG-VPNLYILETIDSVKLADKVNSSWQKKGSSEKLKVMVQVN 138
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TS E+SK G+ P+ G+V+H+R +CP+LEF GLMTIG D T P +F+ LL R
Sbjct: 139 TSSEDSKYGLAPAETAGLVKHIREKCPSLEFVGLMTIGSFGYDLTQGPNPDFQMLLAQRD 198
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
VC+ LG+ D ELSMGMS DFE AIE+GST+VRIGST+FG R Y+K
Sbjct: 199 MVCEKLGLQIDSVELSMGMSSDFEHAIEVGSTNVRIGSTLFGDRVYSK 246
>gi|351699789|gb|EHB02708.1| Proline synthetase co-transcribed bacterial-like protein
[Heterocephalus glaber]
Length = 275
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 117/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
DIKWHF+GHLQ L+ VPNL ++E V + K+A ++ + G + LKV+VQVN
Sbjct: 88 DIKWHFIGHLQKQNVNKLMA-VPNLSVLETVSSVKLAERVNSSWQKKGSPERLKVMVQVN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ PS + +VEH+ +CP+LEF GLMTIG D + P +F+ L + R
Sbjct: 147 TSGEDSKHGLPPSEMIALVEHLNAKCPSLEFVGLMTIGRFGHDLSQGPNPDFQMLWSLRE 206
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C+ L + Q ELSMGMS DF+ AIE+GST++R+G+TIFG R+Y+KK
Sbjct: 207 ELCEKLQVPAGQVELSMGMSSDFQHAIEVGSTNIRVGTTIFGERDYSKK 255
>gi|301606812|ref|XP_002933001.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Xenopus (Silurana) tropicalis]
Length = 265
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 116/168 (69%), Gaps = 5/168 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
DIKWHF+GHLQ L+G VPNL ++E + + K+A+ ++ + G + LKV+VQVN
Sbjct: 85 DIKWHFIGHLQKTHINKLVG-VPNLYILETIDSIKLADKVNSSWQKKGSSEKLKVMVQVN 143
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TS E+SK G+ P+ +V+H+R +C +LEF GLMTIG D T P +F+ LL R
Sbjct: 144 TSSEDSKHGLAPTETTELVKHIREKCSSLEFVGLMTIGSFGYDITQGPNPDFQMLLAQRE 203
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
EVC+ LG+ D ELSMGMS DFE AIE+GST+VRIGSTIFG R Y+K
Sbjct: 204 EVCEKLGLQIDSVELSMGMSSDFEHAIEVGSTNVRIGSTIFGERVYSK 251
>gi|390363087|ref|XP_003730293.1| PREDICTED: LOW QUALITY PROTEIN: proline synthase co-transcribed
bacterial homolog protein-like [Strongylocentrotus
purpuratus]
Length = 270
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 117/172 (68%), Gaps = 5/172 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN-LGRKPLKVLVQVN 90
DI+WH++GHLQSNK K LL PNL MVE V ++K+A+ L+K S R L+V VQ+N
Sbjct: 87 DIRWHYIGHLQSNKVKKLLSS-PNLYMVETVDSKKLASELEKHWSKETDRGKLRVYVQLN 145
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT--STPE-NFRTLLNCRA 147
TSGE +KSG+ P +V H+ CP+L+F+GLMTIG D+ S P +F+ L+ CR
Sbjct: 146 TSGEANKSGVPPEESSSLVRHLFDNCPSLDFAGLMTIGSFDHDLESGPNPDFQCLVRCRE 205
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
++CK + D+ ELSMGMS DFE AI +GST++R+GSTIFG R ++ N
Sbjct: 206 DLCKECSLDIDKVELSMGMSHDFEHAISVGSTNIRVGSTIFGARGSDARRSN 257
>gi|187607726|ref|NP_001119881.1| proline synthase co-transcribed bacterial homolog protein [Danio
rerio]
gi|169642405|gb|AAI60662.1| Prosc protein [Danio rerio]
Length = 283
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 113/168 (67%), Gaps = 7/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKPLKVLVQ 88
+IKWHF+GHLQ LLG VPNL MVE + + K+A ++ + L LK++VQ
Sbjct: 86 EIKWHFIGHLQKGNVNKLLG-VPNLYMVETIDSVKLAEKVNSSWQKLRAANTHRLKIMVQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT---STPENFRTLLNC 145
+NTSGE+SK G+ P + +V+HV +CP L+ +GLMTIG Y +F+ LL C
Sbjct: 145 INTSGEDSKHGLPPDETVNMVKHVVSQCPALDLAGLMTIGRYGYDLNDGPNPDFQLLLKC 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R EVC++L + +Q ELSMGMS DFE AIE+GST++R+GSTIFG REY
Sbjct: 205 RVEVCESLKIPLEQVELSMGMSTDFEHAIEVGSTNIRVGSTIFGTREY 252
>gi|391331349|ref|XP_003740110.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Metaseiulus occidentalis]
Length = 243
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 114/172 (66%), Gaps = 7/172 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP---LKVLVQ 88
+IKWHF+G LQSNK K LL P L VE V + K+A+ L A +++ +P L V+VQ
Sbjct: 73 EIKWHFIGRLQSNKVKALLKA-PRLWAVETVTSSKLADMLHTAWNSMQPQPTSKLSVMVQ 131
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS-TPEN--FRTLLNC 145
VNTSGEE K G++PS +V H+ CP+L F GLMTIG + + + EN F L++
Sbjct: 132 VNTSGEEQKGGVEPSEAANLVRHIMEECPSLSFLGLMTIGFAEVQNGSGENSDFTKLVSL 191
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
R +V K+L M ELSMGMS DFEQAI GST+VR+GSTIFG R+Y+ KQ
Sbjct: 192 REDVAKSLEMDPSTIELSMGMSADFEQAISRGSTNVRVGSTIFGSRDYSTKQ 243
>gi|47207637|emb|CAF90890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 276
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 114/168 (67%), Gaps = 7/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP--LKVLVQ 88
+I+WHF+GHLQ N LLG VPNL +VE V + K+A+ ++ + + G P LKV+VQ
Sbjct: 110 EIQWHFIGHLQKNNVNKLLG-VPNLHLVETVDSVKLADKVNSSWQRIRGASPQRLKVMVQ 168
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT---STPENFRTLLNC 145
VNTSGE+SK G+ P + V H+ CP L FSGLMTIG Y +F+ LL+
Sbjct: 169 VNTSGEQSKHGLPPEETVDAVRHILSHCPALHFSGLMTIGRYGYDLSLGPNPDFQMLLSH 228
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R EVC+AL + +++ ELSMGMS DFE AIE+G+TSVR+GS IFG REY
Sbjct: 229 RQEVCEALKIPQEEVELSMGMSTDFEHAIEVGATSVRVGSIIFGNREY 276
>gi|118101365|ref|XP_424381.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Gallus gallus]
Length = 276
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 117/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ + L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 87 EIKWHFIGHLQKSNVNKLIA-VPNLFMLETVDSVKLADRVNSSWQKKGSPQKLKVMVQVN 145
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ P VEHV +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 146 TSGEDSKHGLPPRDTTAAVEHVINKCPSLEFVGLMTIGSIGHDLSKGPNPDFQVLLSLRQ 205
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
EVC+ L + ++ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+ K
Sbjct: 206 EVCEKLNLPIEKVELSMGMSTDFQHAIEVGSTNVRIGSTIFGERDYSNK 254
>gi|326932746|ref|XP_003212474.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Meleagris gallopavo]
Length = 215
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 117/169 (69%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ + L+ VPNL M+E V + K+A+ ++ + G + LKV+VQVN
Sbjct: 26 EIKWHFIGHLQKSNVNKLIA-VPNLFMLETVDSVKLADRVNSSWQKKGSPQKLKVMVQVN 84
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ P VEHV +CP+LEF GLMTIG D + P +F+ LL+ R
Sbjct: 85 TSGEDSKHGLPPRDTAAAVEHVINKCPSLEFVGLMTIGSIGHDLSKGPNPDFQVLLSLRQ 144
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
EVC+ L + ++ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+ K
Sbjct: 145 EVCEKLNLPIEKVELSMGMSTDFQHAIEVGSTNVRIGSTIFGERDYSNK 193
>gi|281205000|gb|EFA79194.1| hypothetical protein PPL_08020 [Polysphondylium pallidum PN500]
Length = 278
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 115/169 (68%), Gaps = 5/169 (2%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
+DIKWHF+G +QSNK K L G V NL +VE V A+ K SN + PL+++VQVN
Sbjct: 112 KDIKWHFIGSVQSNKIKQL-GSVLNLAVVETVEKSSAADKFAKCFSNHSQ-PLEIMVQVN 169
Query: 91 TSGEESKSGIDPSSCLGIVEHV--RLRCP-NLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
TSGE+SKSG +P+ + IV+H+ +C +L+FSGLMTIG P+ T +F+ L CR
Sbjct: 170 TSGEQSKSGCEPNEVVDIVKHIISDEQCKKSLKFSGLMTIGSPNATEDQPDFKKLFECRD 229
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ K LG+ + LSMGMS DF +AI+ GSTSVR+GS IFG R+Y+KK
Sbjct: 230 SISKQLGLPIESIALSMGMSHDFVEAIKFGSTSVRVGSAIFGERDYSKK 278
>gi|118377078|ref|XP_001021721.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89303487|gb|EAS01475.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 262
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 114/170 (67%), Gaps = 9/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWH++GHLQ+NK K +L VPNL M+E + + K+A ++K L +K LKVL+Q
Sbjct: 69 LPQDIKWHYIGHLQTNKIKQVL--VPNLYMLETIDSIKLATKVNKECQKLSKK-LKVLIQ 125
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
V TS E+ S D + +VE + +CPNLEFSGLMTIG Y F L + + E
Sbjct: 126 VKTSTEDRVSTEDAPA---LVEFIMTQCPNLEFSGLMTIG---YEGDENAFIQLYDLKIE 179
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
+C+ + +D+ ELSMGMS DFE+AI GST+VRIG+TIFG REY K Q
Sbjct: 180 ICEKFKLNKDEIELSMGMSQDFEKAILYGSTNVRIGTTIFGAREYPMKAQ 229
>gi|327284097|ref|XP_003226775.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Anolis carolinensis]
Length = 276
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG-RKPLKVLVQVN 90
DIKWHF+GHLQ N L+G VPNL M+E V + K+A+ ++ + G + LK++VQ+N
Sbjct: 87 DIKWHFIGHLQKNNVNKLIG-VPNLFMLETVDSLKLADRVNASWQKKGCSEKLKIMVQIN 145
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ P + V H+ +CP LEF GLMTIG D + P +F+ L++ R
Sbjct: 146 TSGEDSKHGLPPGETVTTVAHILQKCPGLEFVGLMTIGSFGHDLSMGPNPDFQMLISLRQ 205
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+C L + ++ ELSMGMS DF+ AIE+GST+VRIGSTIFG R+Y+ K
Sbjct: 206 EMCDKLNIPIEKVELSMGMSTDFQHAIEVGSTNVRIGSTIFGERDYSNK 254
>gi|225703686|gb|ACO07689.1| Proline synthetase co-transcribed bacterial homolog protein
[Oncorhynchus mykiss]
Length = 282
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 119/183 (65%), Gaps = 13/183 (7%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
+DK + P+ +I+WHF+GHLQ N LLG VPNL MVE V + K+A+ ++ +
Sbjct: 70 LVDKASNPQILESCPEIEWHFIGHLQKNNVNKLLG-VPNLFMVETVDSAKLADKVNSSWQ 128
Query: 77 NL---GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY- 132
L + LK++VQ+NTSGEESK G+ P + V+H+ +C L FSGLMTIG Y
Sbjct: 129 RLRAASTQKLKIMVQINTSGEESKHGLPPGETVNTVKHILSKCSALHFSGLMTIGRYGYD 188
Query: 133 -TSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
P +F+ LL+ R EVC +L + + ELSMGMS DFE AIE+GST+VR+GSTIFG
Sbjct: 189 LADGPNPDFQALLSRRQEVCASLQLPLEDVELSMGMSTDFEHAIEVGSTNVRVGSTIFGN 248
Query: 191 REY 193
R+Y
Sbjct: 249 RDY 251
>gi|410930996|ref|XP_003978883.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Takifugu rubripes]
Length = 290
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 112/174 (64%), Gaps = 7/174 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP--LKVLVQ 88
+IKWHF+GHLQ N LLG VPNL +VE V + K+A+ ++ + + G P LKV+VQ
Sbjct: 85 EIKWHFIGHLQKNNVNKLLG-VPNLHLVETVDSVKLADKVNSSWQRIRGASPQRLKVMVQ 143
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT---STPENFRTLLNC 145
VNTSGE+SK G+ P + V+H+ C L FSGLMTIG Y +F+ LL
Sbjct: 144 VNTSGEQSKHGLPPEETVNAVKHILSECSALHFSGLMTIGRYGYDLSLGPNPDFQMLLGR 203
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
R EVC L + +++ ELSMGMS DFE AIE+G+TSVR+GS IFG REY N
Sbjct: 204 RQEVCDTLKIPQEEVELSMGMSTDFEHAIEVGATSVRVGSIIFGNREYPNSAAN 257
>gi|209736652|gb|ACI69195.1| Proline synthetase co-transcribed bacterial homolog protein [Salmo
salar]
Length = 282
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 113/168 (67%), Gaps = 7/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKPLKVLVQ 88
+I+WHF+GHLQ N LLG VPNL MVE V + K+A+ ++ + L + LK++VQ
Sbjct: 85 EIEWHFIGHLQKNNVNKLLG-VPNLFMVETVDSAKLADKVNSSWQRLRAASTQTLKIMVQ 143
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY--TSTPE-NFRTLLNC 145
+NTSGEESK G+ P + V+H+ +C L FSGLMTIG Y P +F+ LL+
Sbjct: 144 INTSGEESKHGLPPGETVNTVKHILSKCSALHFSGLMTIGRYGYDLADGPNPDFQALLSR 203
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R EVC +L + + ELSMGMS DFE AIE+GST+VR+GSTIFG R+Y
Sbjct: 204 RQEVCASLQLPLEDVELSMGMSTDFEHAIEVGSTNVRVGSTIFGNRDY 251
>gi|225704980|gb|ACO08336.1| Proline synthetase co-transcribed bacterial homolog protein
[Oncorhynchus mykiss]
Length = 282
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 119/183 (65%), Gaps = 13/183 (7%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
+DK + P+ +I+WHF+GHLQ N LLG VPNL MVE V + K+A+ ++ +
Sbjct: 70 LVDKASNPQILESCPEIEWHFIGHLQKNNVNRLLG-VPNLFMVETVDSAKLADKVNSSWQ 128
Query: 77 NL---GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY- 132
L + LK++VQ+NTSGEESK G+ P + V+H+ +C L FSGLMTIG Y
Sbjct: 129 RLRAASTQKLKIMVQINTSGEESKHGLPPGETVNTVKHILSKCSVLHFSGLMTIGRYGYD 188
Query: 133 -TSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
P +F+ LL+ R EVC +L + + ELSMGMS DFE AIE+GST+VR+GSTIFG
Sbjct: 189 LADGPNPDFQALLSRRQEVCASLQLPLEDVELSMGMSTDFEHAIEVGSTNVRVGSTIFGN 248
Query: 191 REY 193
R+Y
Sbjct: 249 RDY 251
>gi|348540854|ref|XP_003457902.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Oreochromis niloticus]
Length = 286
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 114/174 (65%), Gaps = 7/174 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA---VSNLGRKPLKVLVQ 88
+IKWHF+GHLQ N LLG V NL +VE + + K+A+ ++ + + + LKV+VQ
Sbjct: 85 EIKWHFIGHLQKNNVNKLLG-VQNLFLVETIDSAKLADRVNSSWQRIRGASTQRLKVMVQ 143
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST--PE-NFRTLLNC 145
+NTSGE+SK G+ P + V+H+ +CP L FSGLMTIG Y T P +F+ LL+
Sbjct: 144 INTSGEQSKHGLPPEDTVNTVKHIVTQCPALHFSGLMTIGRYGYNLTLGPNPDFQMLLSR 203
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
R EVC +L + + ELSMGMS DFE AIE+GST+VR+GS IFG REY N
Sbjct: 204 RQEVCDSLKLPMEDVELSMGMSTDFEHAIEVGSTNVRVGSIIFGNREYPNSALN 257
>gi|330918264|ref|XP_003298159.1| hypothetical protein PTT_08769 [Pyrenophora teres f. teres 0-1]
gi|311328814|gb|EFQ93739.1| hypothetical protein PTT_08769 [Pyrenophora teres f. teres 0-1]
Length = 269
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 107/178 (60%), Gaps = 11/178 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK-----PL 83
LP I+WH +G LQSNK K L +PNL V V +EK AN L+K L K L
Sbjct: 79 LPRTIRWHMIGGLQSNKCKQLAEQIPNLWCVSSVDSEKKANELEKGRKALSEKDNSEEKL 138
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN--- 138
+V VQVNTSGE+ KSG++PS + + H+ +CP+L+ SGLMTIG +TPEN
Sbjct: 139 RVKVQVNTSGEKEKSGVEPSDAITLCRHIIEKCPHLQLSGLMTIGAIARSKATTPENENE 198
Query: 139 -FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F L R +V K LG E Q ELSMGMS DFE AI MGS VR+GS IFG R K
Sbjct: 199 DFVALRETRDKVTKELGWEEGQLELSMGMSADFEGAIRMGSDEVRVGSEIFGERPQKK 256
>gi|213510984|ref|NP_001135276.1| proline synthase co-transcribed bacterial homolog protein [Salmo
salar]
gi|209155828|gb|ACI34146.1| Proline synthetase co-transcribed bacterial homolog protein [Salmo
salar]
Length = 282
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 119/183 (65%), Gaps = 13/183 (7%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
+DK + P+ +I+WHF+GHLQ N LLG VPNL MVE V + K+A+ ++ +
Sbjct: 70 LVDKASNPQILESCPEIEWHFIGHLQKNNVNKLLG-VPNLFMVETVDSVKLADKVNSSWL 128
Query: 77 NL---GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY- 132
L + LK++VQ+NTSGEESK G+ P + V+H+ +C L FSGLMTIG Y
Sbjct: 129 RLRTASTQTLKIMVQINTSGEESKHGLPPDETVTTVKHILSKCSALHFSGLMTIGRYGYD 188
Query: 133 -TSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
P +F+ LL+ R EVC +L + + ELSMGMS DFE AIE+GST+VR+GSTIFG
Sbjct: 189 LADGPNPDFQALLSRRQEVCASLQLPLEDVELSMGMSTDFEHAIEVGSTNVRVGSTIFGN 248
Query: 191 REY 193
R+Y
Sbjct: 249 RDY 251
>gi|407927123|gb|EKG20026.1| Alanine racemase [Macrophomina phaseolina MS6]
Length = 278
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 116/192 (60%), Gaps = 21/192 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-------- 80
LP I+WHF+G LQ+NK K L +PNL V V + K A+ L+K L
Sbjct: 81 LPRSIRWHFIGALQTNKCKPLAEQIPNLFCVSSVDSAKKADQLEKGRKTLVEKKKQEGKE 140
Query: 81 ----KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTS 134
+PL++ VQVNTSGEESKSG++P + HVR +CP+L+ SGLMTIG +
Sbjct: 141 EEVSEPLRIQVQVNTSGEESKSGVEPKDAAALCRHVREQCPHLKLSGLMTIGAIARSQAT 200
Query: 135 TP----ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG- 189
TP E+F L R +V + LG+A D ELSMGMS DFE AI MGS VR+G+TIFG
Sbjct: 201 TPETENEDFVVLRETRDKVAQELGLAADDLELSMGMSSDFEGAIAMGSDEVRVGTTIFGV 260
Query: 190 --PREYAKKQQN 199
P++ AK +++
Sbjct: 261 RPPKKDAKVKED 272
>gi|320163280|gb|EFW40179.1| alanine racemase [Capsaspora owczarzaki ATCC 30864]
Length = 280
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 107/170 (62%), Gaps = 6/170 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLV 87
LP DI+WHF+GHLQSNKA + + +PNL +VE V + K+A L+KA + R PL+V V
Sbjct: 106 LPRDIQWHFIGHLQSNKA-SHVAAIPNLFVVETVDSVKLATALEKACAKQTRDSPLRVFV 164
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP----DYTSTPENFRTLL 143
QVNTSGE SKSG + + + + H+ CP+L GLMTIG P S +F L
Sbjct: 165 QVNTSGETSKSGSNAAEAIAVARHIVNECPHLRLCGLMTIGQPGRQCSEASPNPDFLLLN 224
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R + ++L + ELS GMS DFE AI MGST++R+GSTIFG R Y
Sbjct: 225 EIRQQTAESLSLRAADLELSFGMSDDFEHAISMGSTNIRVGSTIFGSRSY 274
>gi|387017800|gb|AFJ51018.1| Proline synthase co-transcribed bacterial homolog protein-like
[Crotalus adamanteus]
Length = 276
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 114/172 (66%), Gaps = 11/172 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK----PLKVLV 87
+IKWHF+GHLQ + L+ VPNL MVE V + K+A DK S +K LK++V
Sbjct: 87 EIKWHFIGHLQKSNVNKLIV-VPNLFMVETVDSIKLA---DKVNSTWQKKNSSEKLKIMV 142
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLN 144
QVNTSGE SK G+ P + VEH+ +CPNLEF GLMTIG D + P +F+ L++
Sbjct: 143 QVNTSGETSKHGLPPGELITTVEHILQKCPNLEFVGLMTIGSFGHDLSKGPNPDFQLLIS 202
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
R E+C+ L + ++ ELSMGMS DF+ AIE+GST+VRIGSTIFG R Y K
Sbjct: 203 LRQELCEKLNIPIEKIELSMGMSTDFQHAIEVGSTNVRIGSTIFGERSYPNK 254
>gi|225703472|gb|ACO07582.1| Proline synthetase co-transcribed bacterial homolog protein
[Oncorhynchus mykiss]
Length = 282
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 119/183 (65%), Gaps = 13/183 (7%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
+D+ + P+ +I+WHF+GHLQ N LLG VPNL MVE V + K+A+ ++ +
Sbjct: 70 LVDRASNPQILESCPEIEWHFIGHLQKNNVNKLLG-VPNLFMVETVDSVKLADKVNSSWL 128
Query: 77 NL---GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PD 131
L + LK++VQ+NTSGEESK G+ P + V+H+ +C L FSGLMTIG D
Sbjct: 129 RLRTASTQTLKIMVQINTSGEESKHGLPPGETVTTVKHILSKCSALHFSGLMTIGRYGHD 188
Query: 132 YTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
P +F+ LL+ R EVC +L + + ELSMGMS DFE AIE+GST+VR+GSTIFG
Sbjct: 189 LADGPNPDFQALLSRRQEVCASLQLPLEDVELSMGMSTDFEHAIEVGSTNVRVGSTIFGN 248
Query: 191 REY 193
R+Y
Sbjct: 249 RDY 251
>gi|169610101|ref|XP_001798469.1| hypothetical protein SNOG_08144 [Phaeosphaeria nodorum SN15]
gi|111063300|gb|EAT84420.1| hypothetical protein SNOG_08144 [Phaeosphaeria nodorum SN15]
Length = 269
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 112/178 (62%), Gaps = 11/178 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK-----PL 83
LP I+WH +G LQSNK K L +PNL V V +EK AN L+K L K L
Sbjct: 79 LPRSIRWHMIGGLQSNKCKQLAEQIPNLWCVSSVDSEKKANELEKGRKALIEKDNAVEKL 138
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT--STPE---- 137
+++VQVNTSGEE+KSG++P+ + +HV +CP+LE GLMTIG + +TPE
Sbjct: 139 RIMVQVNTSGEEAKSGVEPADTTALCKHVIEKCPHLELIGLMTIGAIARSKETTPETENE 198
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+F L + R +V + LG +D+ ELSMGMS DFE AI+MGS VR+GS IFG R K
Sbjct: 199 DFVCLKDVRDKVAQELGWEQDKLELSMGMSADFEGAIKMGSDEVRVGSQIFGERPVKK 256
>gi|156405523|ref|XP_001640781.1| predicted protein [Nematostella vectensis]
gi|156227917|gb|EDO48718.1| predicted protein [Nematostella vectensis]
Length = 297
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 6/165 (3%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKPLKVLVQVNT 91
++WHF+GHLQ NK L+G VPNL MVE V +EK+A L+ + R+PLKV+V+VNT
Sbjct: 81 LRWHFIGHLQRNKCNNLVG-VPNLYMVETVDSEKLAATLNNSWGKFPNREPLKVMVEVNT 139
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCRA 147
S E+SK G P+ + E V CP+L SGLMTIG +Y +F L+ CR
Sbjct: 140 SEEKSKKGCLPAEATQLTEFVFNECPHLRLSGLMTIGQYNYDWEKHGPNPDFLRLIRCRE 199
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
E+C L + ++ ELSMGMS D+E+AI MGST+VR+GSTIFG RE
Sbjct: 200 EICGKLNLPLERFELSMGMSSDYEKAITMGSTNVRVGSTIFGVRE 244
>gi|452839676|gb|EME41615.1| hypothetical protein DOTSEDRAFT_90415 [Dothistroma septosporum
NZE10]
Length = 267
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 106/179 (59%), Gaps = 12/179 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-----KPL 83
LP+ I+WH +G LQ+NK K L VPNL V V K AN L+K +L + L
Sbjct: 84 LPKSIRWHMIGGLQTNKCKPLASKVPNLWCVSSVDTAKKANELEKGRKSLAETASLTEKL 143
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG-------MPDYTSTP 136
+VLVQVNTSGEESKSG++P + +HVR RCP+L+ +GLMTIG +
Sbjct: 144 RVLVQVNTSGEESKSGVEPREATELCKHVRERCPSLQLAGLMTIGAIARSREASSAEAMN 203
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+F TL R +V LGM + LSMGMS DFE AI GS VR+G+TIFG R K
Sbjct: 204 EDFVTLRETRDKVAGELGMETSELALSMGMSSDFEAAIAQGSDEVRVGTTIFGERPAKK 262
>gi|452977086|gb|EME76859.1| hypothetical protein MYCFIDRAFT_53705 [Pseudocercospora fijiensis
CIRAD86]
Length = 258
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 107/181 (59%), Gaps = 14/181 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP------ 82
LP +KWH +G LQ+NK K L VPNL V V K A+ L+K L +
Sbjct: 73 LPRSVKWHMIGGLQTNKCKKLASQVPNLYCVSSVDTSKKADELEKGRKTLVEQAKETLSE 132
Query: 83 -LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM---PDYTSTP-- 136
L+VLVQVNTSGEESKSG++P + HVR +CP+L+ +GLMTIG S+P
Sbjct: 133 KLRVLVQVNTSGEESKSGVEPCEAATLCRHVREKCPSLQLAGLMTIGAIARSREASSPDG 192
Query: 137 --ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
E+F TL R +V K LG+ + ELSMGMS DFE AI GS VR+G+TIFG R
Sbjct: 193 VNEDFFTLRETRDKVAKELGIERSELELSMGMSQDFEAAISAGSDEVRVGTTIFGERPAK 252
Query: 195 K 195
K
Sbjct: 253 K 253
>gi|321475478|gb|EFX86441.1| hypothetical protein DAPPUDRAFT_313114 [Daphnia pulex]
Length = 316
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
DI+WH +GHLQSNK K L V NL MVE + + KIA+ L+K+ L + + LKV+VQV
Sbjct: 83 DIRWHMIGHLQSNKMKKL-ASVQNLYMVETIDSVKIADALNKSWIKLNKMEKLKVMVQVK 141
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST--PE-NFRTLLNCRA 147
TS EE+KSG++PS + + + + +CP LEF GLMTIG +Y + P +F ++ C
Sbjct: 142 TSDEETKSGVEPSEAIKLAKFIIEKCPELEFCGLMTIGASNYDVSLGPNPDFLKMIECHK 201
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ + ++ ELSMGMS D+E AIE+GST+VR+GS IFG REY
Sbjct: 202 EITCIPDLPKESLELSMGMSSDYEHAIELGSTNVRVGSLIFGQREY 247
>gi|189204762|ref|XP_001938716.1| alanine racemase family protein (ISS) [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985815|gb|EDU51303.1| alanine racemase family protein (ISS) [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 269
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 106/178 (59%), Gaps = 11/178 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK-----PL 83
LP I+WH +G LQSNK K L +PNL V V +EK AN L+K L K L
Sbjct: 79 LPRTIRWHMIGGLQSNKCKQLAEQIPNLWCVSSVDSEKKANELEKGRKALLEKDNSAEKL 138
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN--- 138
+V VQVNTSGE+ KSG++PS + + + +CP+L+ SGLMTIG +TPEN
Sbjct: 139 RVKVQVNTSGEKEKSGVEPSDAIILCRQIIEKCPHLQLSGLMTIGAIARSRATTPENENE 198
Query: 139 -FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F L R +V K LG E Q ELSMGMS DFE AI MGS VR+GS IFG R K
Sbjct: 199 DFVALRETRDKVAKELGWEEGQLELSMGMSADFEGAIRMGSDEVRVGSEIFGERPQKK 256
>gi|291236536|ref|XP_002738198.1| PREDICTED: proline synthetase co-transcribed homolog [Saccoglossus
kowalevskii]
Length = 298
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 110/173 (63%), Gaps = 11/173 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP----LKVLV 87
DI+WH+VGHLQ NK ++G +PNL MVE + K+A+ L+ A GRK LKV+V
Sbjct: 96 DIRWHYVGHLQRNKVNKIIG-IPNLFMVESLDTPKLADVLNAA---WGRKKKVGKLKVMV 151
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY--TSTPE-NFRTLLN 144
QVNTS E SK G + H+ L C NLEF+GLMTIG ++ + P +F+ L+
Sbjct: 152 QVNTSNEASKHGCKLCDAESLAGHILLSCSNLEFNGLMTIGRVNHELSQGPNPDFQQLVQ 211
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
CR E+CK + + ELSMGMS DFE AI +GST+VR+GS IFG R A KQ
Sbjct: 212 CREEICKKFMLDKATVELSMGMSNDFEHAISVGSTNVRVGSAIFGARPDATKQ 264
>gi|170065074|ref|XP_001867791.1| proline synthetase co-transcribed protein-like protein [Culex
quinquefasciatus]
gi|167882213|gb|EDS45596.1| proline synthetase co-transcribed protein-like protein [Culex
quinquefasciatus]
Length = 337
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 116/176 (65%), Gaps = 11/176 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP----LKV 85
+DI+WHF+GHLQSNK ++ +PNL M+E V N K+A +L+KA + KP L V
Sbjct: 164 KDIQWHFIGHLQSNKINKIVN-LPNLYMIETVHNAKLAENLNKAWEKVKADKPDSSKLNV 222
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTL 142
L+Q+NTSGE+ K+G +P+ + + V +CPNL G+MTIG DY++ P +F L
Sbjct: 223 LIQINTSGEDEKNGTNPAEAVNLYRFVTEKCPNLNCHGVMTIGRFGHDYSTGPNPDFIEL 282
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
+ C A++C ++ ++SMGMS DF QAIEMGST VR+GS+IFG R AKK +
Sbjct: 283 MKCHADICSTFEKDPEEVQVSMGMSDDFVQAIEMGSTIVRVGSSIFGAR--AKKTE 336
>gi|270013195|gb|EFA09643.1| hypothetical protein TcasGA2_TC011768 [Tribolium castaneum]
Length = 248
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 113/172 (65%), Gaps = 8/172 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--RKPLKVLVQ 88
++IKWHF+GHLQ+NK +L PNL MVE V ++K+A +L+K+ G L V+VQ
Sbjct: 80 KEIKWHFIGHLQTNKINKVLA-TPNLYMVETVHSQKLAANLNKSWPKFGPLDSKLNVMVQ 138
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNC 145
+NTS EE KSGI+P+ + + + V CPNL GLMTIG D ++ P +F TL +C
Sbjct: 139 INTSAEEEKSGIEPNEVVDLTKFVLNECPNLHLEGLMTIGKFGYDISNGPNPDFLTLRSC 198
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
R VC+ LG+ ELSMGMS +E AIE+GST+VR+G+ IFG R KKQ
Sbjct: 199 RDRVCRELGLDWKTVELSMGMSDGYEHAIELGSTNVRVGTAIFGER--TKKQ 248
>gi|268638068|ref|XP_001134585.2| hypothetical protein DDB_G0278713 [Dictyostelium discoideum AX4]
gi|284018110|sp|Q1ZXI6.2|PROSC_DICDI RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|256012994|gb|EAS66901.2| hypothetical protein DDB_G0278713 [Dictyostelium discoideum AX4]
Length = 255
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 113/179 (63%), Gaps = 14/179 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLK------- 84
+IKWHF+G +QSNK+K +L V NL +VE V N+KI + L K++ N
Sbjct: 78 EIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNK 136
Query: 85 ---VLVQVNTSGEESKSGIDPSSCLGIVEHV--RLRCPN-LEFSGLMTIGMPDYTSTPEN 138
+++QVNTSGEESKSG P CL +V+H C N L F GLMTIG P+ T +
Sbjct: 137 KLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNPNATPDQPD 196
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
F+ L++C+ + K L + D ELSMGMS DFE AIE GSTSVR+GS IFG R+Y+ K+
Sbjct: 197 FKCLVDCKNNISKQLNIPLDSIELSMGMSHDFEPAIEFGSTSVRVGSAIFGERDYSNKK 255
>gi|170072194|ref|XP_001870118.1| proline synthetase associated protein [Culex quinquefasciatus]
gi|167868284|gb|EDS31667.1| proline synthetase associated protein [Culex quinquefasciatus]
Length = 253
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 116/176 (65%), Gaps = 11/176 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP----LKV 85
+DI+WHF+GHLQSNK ++ +PNL M+E V N K+A +L+KA + KP L V
Sbjct: 80 KDIQWHFIGHLQSNKINKIVN-LPNLYMIETVHNAKLAENLNKAWEKVKADKPDSSKLNV 138
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTL 142
L+Q+NTSGE+ K+G +P+ + + V +CPNL G+MTIG DY++ P +F L
Sbjct: 139 LIQINTSGEDEKNGTNPAEAVNLYRFVTEKCPNLNCHGVMTIGRFGHDYSTGPNPDFIEL 198
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
+ C A++C ++ ++SMGMS DF QAIEMGST VR+GS+IFG R AKK +
Sbjct: 199 MKCHADICSTFEKDPEEVQVSMGMSDDFVQAIEMGSTIVRVGSSIFGAR--AKKTE 252
>gi|91090970|ref|XP_974705.1| PREDICTED: similar to proline synthetase co-transcribed
bacterial-like protein [Tribolium castaneum]
Length = 292
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 113/172 (65%), Gaps = 8/172 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--RKPLKVLVQ 88
++IKWHF+GHLQ+NK +L PNL MVE V ++K+A +L+K+ G L V+VQ
Sbjct: 124 KEIKWHFIGHLQTNKINKVLA-TPNLYMVETVHSQKLAANLNKSWPKFGPLDSKLNVMVQ 182
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY--TSTPE-NFRTLLNC 145
+NTS EE KSGI+P+ + + + V CPNL GLMTIG Y ++ P +F TL +C
Sbjct: 183 INTSAEEEKSGIEPNEVVDLTKFVLNECPNLHLEGLMTIGKFGYDISNGPNPDFLTLRSC 242
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
R VC+ LG+ ELSMGMS +E AIE+GST+VR+G+ IFG R KKQ
Sbjct: 243 RDRVCRELGLDWKTVELSMGMSDGYEHAIELGSTNVRVGTAIFGER--TKKQ 292
>gi|289741895|gb|ADD19695.1| proline synthetase co-transcribed protein [Glossina morsitans
morsitans]
Length = 250
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 120/181 (66%), Gaps = 13/181 (7%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
+DK P+ DIKWHF+GHLQ+NK +L +PN+ +++ V EK+A++L+ +
Sbjct: 66 LVDKSQHPDILQKCPDIKWHFIGHLQNNKVNKIL-KLPNIHLIQTVDTEKLADNLNNSWR 124
Query: 77 NL---GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PD 131
L ++PL+VL+Q+NTSGE++K+GI+P+ + +H++ NL+ G+MTIG D
Sbjct: 125 KLEIDNKQPLRVLIQINTSGEDAKNGIEPNEAPRLYKHIKENLTNLQVDGVMTIGAFGHD 184
Query: 132 YTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
YT P +F L+ ++C+ + ++ ++SMGMS DFE+AIEMGST VR+GS+IFG
Sbjct: 185 YTKGPNPDFVCLMQVHRQICEDYHLKPEEVQVSMGMSDDFEKAIEMGSTIVRVGSSIFGH 244
Query: 191 R 191
R
Sbjct: 245 R 245
>gi|453088062|gb|EMF16103.1| alanine racemase family protein [Mycosphaerella populorum SO2202]
Length = 266
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 106/179 (59%), Gaps = 12/179 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP-----L 83
LP I+WH +G LQ+NK K L VPNL V V K AN L+K +L K L
Sbjct: 83 LPRSIRWHMIGGLQTNKCKPLASEVPNLWCVSSVDTAKKANELEKGRKSLAEKESLTDKL 142
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG-------MPDYTSTP 136
+VLVQVNTSGEESKSG++P + HVR +CP+L+ +GLMTIG +
Sbjct: 143 RVLVQVNTSGEESKSGVEPKDAPELCRHVREQCPSLQLAGLMTIGAIARSQEASSAEALN 202
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+F L R +V LG+ +D+ +LSMGMS DFE A+ GS VR+G+TIFG R K
Sbjct: 203 EDFVALRETRDKVAIELGIEKDELKLSMGMSQDFEAAVSAGSDEVRVGTTIFGDRPAKK 261
>gi|328767687|gb|EGF77736.1| hypothetical protein BATDEDRAFT_91499 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 105/169 (62%), Gaps = 6/169 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI WHF+G +QSNK K L VPNL +E + + K A ++KA L PL+V +Q
Sbjct: 77 LPSDIHWHFIGSIQSNKCKAL-ADVPNLWTIETIDSSKKALTMNKACQKLA-SPLRVFLQ 134
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRTLLNCR 146
+NTSGE +KSGI PS+C+ + + C LE GLM IG P N F L+ C+
Sbjct: 135 INTSGEATKSGILPSNCVMTAKEILDECDKLELIGLMCIGAPHNAKNDRNPDFDLLVECK 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
++ A GM+ ELSMGMS DFE AIE GST++R+GS+IFG R Y K
Sbjct: 195 QQIEAAFGMS--GLELSMGMSDDFESAIEYGSTNIRVGSSIFGSRSYTK 241
>gi|198414039|ref|XP_002124883.1| PREDICTED: similar to Proline synthetase co-transcribed bacterial
homolog protein [Ciona intestinalis]
Length = 250
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 111/190 (58%), Gaps = 6/190 (3%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y K L+ D L DIKWH++G Q A L+ V NL M+E + K A+ ++
Sbjct: 64 YLKELVVKSNSPDMAELCPDIKWHYIGTFQKKMASVLMR-VSNLHMLETLNGAKEADAVN 122
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
+ +PL+VLVQVNTSGEESKSG+ S C + H+ C NL+ +GLMTIG Y
Sbjct: 123 SRWKST--EPLQVLVQVNTSGEESKSGVTASECTELAGHIHRNCSNLKLAGLMTIGSFGY 180
Query: 133 TSTP---ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
T +F L CR VCK LG+ E +LSMGMS D+ AIEMGST VR+G+ IFG
Sbjct: 181 DCTQGPNPDFTKLAECRKTVCKELGIPEKDLQLSMGMSHDYTHAIEMGSTMVRVGTAIFG 240
Query: 190 PREYAKKQQN 199
R+Y K ++
Sbjct: 241 ARDYNKTEEQ 250
>gi|380016258|ref|XP_003692104.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Apis florea]
Length = 248
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 111/167 (66%), Gaps = 7/167 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLV 87
++I WHF+GHLQ NK LL VPNL ++E + NEK+A+ ++ + N + LKV+V
Sbjct: 78 KNIHWHFIGHLQRNKVNKLLS-VPNLYVIETIDNEKLASAVNTSWINYRKDENLKLKVMV 136
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLN 144
QVNTS E+ K+G + ++ +V+H+ + C NLEF GLMTIGM DY+ P +F L
Sbjct: 137 QVNTSKEQEKNGCEITNVCSLVQHIIVNCKNLEFIGLMTIGMFGYDYSKEPNPDFLCLKE 196
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
CR V K L + + ELSMGMS D+E A+E+GST+VR+G+ IFG R
Sbjct: 197 CRENVSKQLDIDLKRIELSMGMSNDYEHAVELGSTNVRVGTAIFGER 243
>gi|66524764|ref|XP_623518.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Apis mellifera]
Length = 248
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLVQ 88
+I WHF+GHLQ NK LL VPNL ++E + NEK+A+ ++ + N + LKV+VQ
Sbjct: 79 NIHWHFIGHLQRNKVNKLLS-VPNLYVIESIDNEKLASAVNTSWINYRKDENLKLKVMVQ 137
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNC 145
VNTS E+ K+G + ++ +V+H+ C NLEF GLMTIGM DY+ P +F L C
Sbjct: 138 VNTSKEQEKNGCEITNVCPLVQHIIANCKNLEFIGLMTIGMFGYDYSKEPNPDFLCLKEC 197
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R V K L + Q ELSMGMS D+E A+E+GST+VR+G+ IFG R
Sbjct: 198 RENVSKQLDIDLKQIELSMGMSNDYEHAVELGSTNVRVGTAIFGER 243
>gi|347966256|ref|XP_321478.5| AGAP001621-PA [Anopheles gambiae str. PEST]
gi|347966258|ref|XP_003435889.1| AGAP001621-PB [Anopheles gambiae str. PEST]
gi|333470142|gb|EAA00912.5| AGAP001621-PA [Anopheles gambiae str. PEST]
gi|333470143|gb|EGK97524.1| AGAP001621-PB [Anopheles gambiae str. PEST]
Length = 260
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 12/175 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG------RKPLK 84
+DI+WHF+GHLQSNK ++ +PNL M++ V + K+A L+KA + ++ L
Sbjct: 85 QDIRWHFIGHLQSNKINKVIN-LPNLHMIQTVHSIKLAEGLNKAWEKVKAENAEKKQQLN 143
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRT 141
VLVQ+NTSGE+ K+G+ P +G+ +V +CPNL G+MTIG DYT+ P +F T
Sbjct: 144 VLVQINTSGEDEKNGVQPEDAVGLFRYVLDKCPNLNCEGVMTIGRFGHDYTTGPNPDFGT 203
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L+ C+ ++C + ++SMGMS DF QAIE GST VR+GS+IFG R AKK
Sbjct: 204 LMKCQQDICSTFERDPAELQVSMGMSDDFVQAIEAGSTIVRVGSSIFGAR--AKK 256
>gi|451847774|gb|EMD61081.1| hypothetical protein COCSADRAFT_174404 [Cochliobolus sativus
ND90Pr]
Length = 269
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 103/174 (59%), Gaps = 11/174 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK-----PL 83
LP I WH +G LQSNK K L +PNL V V EK AN L+K L K L
Sbjct: 79 LPRSIHWHMIGGLQSNKCKQLAEQIPNLWCVSSVDTEKKANELEKGRKALLEKDGSASKL 138
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST------PE 137
+V+VQVNTSGE+SKSG++P L + HV +CP+L+ +G MTIG + E
Sbjct: 139 RVMVQVNTSGEDSKSGVEPQDALALCRHVVDKCPHLQLAGFMTIGAIARSKAMTEENENE 198
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F L R V +ALG +++ ELSMGMS DFE AI MGS VR+GS IFG R
Sbjct: 199 DFVALRETRDRVAEALGWDKEKLELSMGMSADFEGAIRMGSDEVRVGSEIFGAR 252
>gi|345491690|ref|XP_001607241.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Nasonia vitripennis]
Length = 249
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 110/167 (65%), Gaps = 7/167 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLV 87
+DI+WHF+GHLQ + LL V NL +VE V +EKIA LD A + LK++V
Sbjct: 80 KDIRWHFIGHLQKSNVNKLLK-VANLHIVETVDSEKIATALDSAWPKFRKSDDAKLKIMV 138
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---ENFRTLLN 144
QVNTS EE+KSG + + +V+++ +CPNLEF+GLMTIG Y + +F L +
Sbjct: 139 QVNTSREEAKSGCEVENASSMVKYIFEKCPNLEFTGLMTIGEYGYDVSKGPNPDFLALKD 198
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+A+VC+ LG+ + ELSMGMS D+E AIE+GS+ VR+G+ IFG R
Sbjct: 199 VKAKVCEDLGLDTKKVELSMGMSTDYEHAIELGSSLVRVGTAIFGER 245
>gi|451996850|gb|EMD89316.1| hypothetical protein COCHEDRAFT_1196219 [Cochliobolus
heterostrophus C5]
Length = 269
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 103/174 (59%), Gaps = 11/174 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK-----PL 83
LP I WH +G LQSNK K L +PNL V V EK AN L+K L K L
Sbjct: 79 LPRSIHWHMIGGLQSNKCKQLAEQIPNLWCVSSVDTEKKANELEKGRKALLEKDSSASKL 138
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST------PE 137
+V+VQVNTSGE+SKSG++P L + HV +CP+L+ +G MTIG + E
Sbjct: 139 RVMVQVNTSGEDSKSGVEPQDALALCRHVVDKCPHLQLAGFMTIGAIARSKAMTEENENE 198
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F L R V +ALG +++ ELSMGMS DFE AI MGS VR+GS IFG R
Sbjct: 199 DFVALRETRDRVAEALGWDKEKLELSMGMSADFEGAIRMGSDEVRVGSEIFGVR 252
>gi|258577879|ref|XP_002543121.1| hypothetical protein UREG_02637 [Uncinocarpus reesii 1704]
gi|237903387|gb|EEP77788.1| hypothetical protein UREG_02637 [Uncinocarpus reesii 1704]
Length = 297
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 109/177 (61%), Gaps = 14/177 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG-------RK 81
LP +I+WHF+G LQSNK TL V L VE V +K A+ LDK ++
Sbjct: 111 LPPEIRWHFIGGLQSNKCVTLARDVRGLWAVESVDTQKKASLLDKGWGERSNSQEGQQQE 170
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTP--- 136
PL+V VQVNTSGEESKSG++PS+ + + ++ +CP L+ GLMTIG +TP
Sbjct: 171 PLRVFVQVNTSGEESKSGVEPSNAVELCRFIQEKCPRLKLQGLMTIGAIARSKATTPETQ 230
Query: 137 -ENFRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+F L R VC+ LG ED+ ELSMGMS DFE AI MGS VR+GSTIFG R
Sbjct: 231 NEDFVCLRETRDNVCQELGWEGEDKLELSMGMSEDFEGAIAMGSNEVRVGSTIFGAR 287
>gi|194905647|ref|XP_001981231.1| GG11955 [Drosophila erecta]
gi|190655869|gb|EDV53101.1| GG11955 [Drosophila erecta]
Length = 254
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 110/166 (66%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN---LGRKPLKVLVQ 88
DI+WHF+GH+Q+NK +L VPNL M++ V +EK+A LD A S +PL+VL+Q
Sbjct: 86 DIRWHFIGHMQTNKINKVLA-VPNLRMIQTVDSEKLATKLDAAWSKRQPAPAEPLQVLIQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTSGE+ KSGI+ + +++R +L +G+MTIG DY+ P +F +L+
Sbjct: 145 INTSGEDVKSGIEAKDAPALYQYIRSNLKHLNLTGIMTIGAFGFDYSKGPNPDFVSLMQV 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+C+A +A D +SMGMS DF++AIEMGST VR+GS+IFG R
Sbjct: 205 HRSICEAHSLAPDSVLVSMGMSNDFDKAIEMGSTVVRVGSSIFGHR 250
>gi|432864566|ref|XP_004070352.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Oryzias latipes]
Length = 291
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 112/168 (66%), Gaps = 7/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKPLKVLVQ 88
+IKWHF+GHLQ N LLG V NL +VE V + K+A+ ++ + L + LKV+VQ
Sbjct: 85 EIKWHFIGHLQKNNVNKLLG-VSNLFLVETVDSAKLADRVNSSWQRLRGADTQRLKVMVQ 143
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST--PE-NFRTLLNC 145
+NTSGE++K G+ P + V+++ +C L F GLMTIG Y T P +F+ LL+
Sbjct: 144 INTSGEQNKHGLPPEETVSTVKYIVSQCSALHFLGLMTIGRYGYDLTLGPNPDFQMLLSR 203
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R EVC +L + ++ ELSMGMS DFE AIE+G+T+VR+GS IFG REY
Sbjct: 204 RQEVCDSLKLPLEEVELSMGMSTDFEHAIEVGATNVRVGSIIFGNREY 251
>gi|195575019|ref|XP_002105480.1| GD17245 [Drosophila simulans]
gi|194201407|gb|EDX14983.1| GD17245 [Drosophila simulans]
Length = 270
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN---LGRKPLKVLVQ 88
DI+WHF+GH+QSNK +L VPNL M++ V +EK+A LD A S +PL+VL+Q
Sbjct: 86 DIRWHFIGHMQSNKINKILS-VPNLHMIQTVDSEKLATKLDAAWSKRQPTPEEPLQVLIQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTSGE+ KSGI+ + ++++ +L G+MTIG DY S P +F +L+
Sbjct: 145 INTSGEDVKSGIEAKDAPALYQYIKSNLKHLNLMGIMTIGAFGFDYASGPNPDFVSLMQV 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+C+A +A D +SMGMS DF++AIEMGST VR+GS+IFG R
Sbjct: 205 HRSICEAYSLAPDSVLVSMGMSHDFDKAIEMGSTVVRVGSSIFGHR 250
>gi|397571390|gb|EJK47773.1| hypothetical protein THAOC_33490 [Thalassiosira oceanica]
Length = 305
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 109/175 (62%), Gaps = 13/175 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLG--GVPNLDMVEGVGNEKIANHLDKAVSNL-----GRK 81
LP+D+ WHF+G LQSNKA L+ G+ L +E V K+AN L+ AV + +K
Sbjct: 131 LPDDVCWHFIGPLQSNKAAALVKTVGLDKLKCIETVSTIKLANKLNNAVKTMNEELDAKK 190
Query: 82 PLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPENF 139
L + +QVNTSGEESKSG+ P + + + C L +GLMTIG P DY+ F
Sbjct: 191 TLGIYIQVNTSGEESKSGVSPGEEVANLAKQISDDCSFLTINGLMTIGAPGDYSC----F 246
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
TL CR EV LG + ELSMGMSGD+++AI G++SVR+GSTIFG R+Y+
Sbjct: 247 DTLAKCREEVATILGKTTGELELSMGMSGDYDEAIARGASSVRVGSTIFGARDYS 301
>gi|195341465|ref|XP_002037330.1| GM12173 [Drosophila sechellia]
gi|194131446|gb|EDW53489.1| GM12173 [Drosophila sechellia]
Length = 254
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN---LGRKPLKVLVQ 88
DI+WHF+GH+QSNK +L VPNL M++ V +EK+A LD A S +PL+VL+Q
Sbjct: 86 DIRWHFIGHMQSNKINKILS-VPNLHMIQTVDSEKLATKLDAAWSKRQPTPEEPLQVLIQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTSGE+ KSGI+ + ++++ +L G+MTIG DY S P +F +L+
Sbjct: 145 INTSGEDVKSGIEAKDAPALYQYIKSNLKHLNLMGIMTIGAFGFDYASGPNPDFVSLMQV 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+C+A +A D +SMGMS DF++AIEMGST VR+GS+IFG R
Sbjct: 205 HRTICEAHSLAPDSVLVSMGMSHDFDKAIEMGSTVVRVGSSIFGHR 250
>gi|50549285|ref|XP_502113.1| YALI0C21934p [Yarrowia lipolytica]
gi|49647980|emb|CAG82433.1| YALI0C21934p [Yarrowia lipolytica CLIB122]
Length = 239
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 9/170 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLK 84
NLP++I+WHF+G LQSNK L +PNL VE V EK A L+ A K P+
Sbjct: 64 NLPQEIQWHFIGSLQSNKCAQLAKNIPNL-WVETVDGEKKAKKLNDAREQSEYKDKAPVH 122
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE---NFRT 141
V VQVNTSGE KSG+DP +V+++ CP L+ +GLMTIG + + E +F T
Sbjct: 123 VFVQVNTSGESQKSGLDPEDVSKVVDYIIKECPQLKLAGLMTIGSIEQSKASEENKDFAT 182
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L+ R + +A + ELSMGMS DFE+AI+ GST+VRIGSTIFG R
Sbjct: 183 LVQIRDSIEQAFDIT--GLELSMGMSSDFEEAIKQGSTNVRIGSTIFGGR 230
>gi|212535840|ref|XP_002148076.1| alanine racemase family protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210070475|gb|EEA24565.1| alanine racemase family protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 314
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 16/179 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--------AVSNLGR 80
LP IKWHF+G LQSNK +L V L VE V EK A LDK A+S R
Sbjct: 121 LPRGIKWHFIGGLQSNKCVSLARDVRGLWAVESVDTEKKAKLLDKGWGERDISALSEEER 180
Query: 81 -KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT--STPE 137
+ L+V VQVNTSGEE+KSG++P + + ++R +CP L+ GLMTIG + ST E
Sbjct: 181 TQKLRVFVQVNTSGEEAKSGVEPVATPALCRYIREQCPRLKLQGLMTIGAIARSKESTNE 240
Query: 138 N--FRTLLNCRAEVCKALGMAE---DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
N F +L+ R + KALGM+E D ELSMGMS DFE AI +GS VR+G+TIFG R
Sbjct: 241 NADFVSLIETREAIIKALGMSEQEADDFELSMGMSSDFEGAIALGSDQVRVGTTIFGER 299
>gi|396491601|ref|XP_003843603.1| hypothetical protein LEMA_P077130.1 [Leptosphaeria maculans JN3]
gi|312220182|emb|CBY00124.1| hypothetical protein LEMA_P077130.1 [Leptosphaeria maculans JN3]
Length = 770
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 104/178 (58%), Gaps = 11/178 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-----GRKPL 83
LP I+WH +G LQSNK K L +PNL V V EK AN L+K L L
Sbjct: 580 LPRSIQWHMIGGLQSNKCKALAEQIPNLWCVSSVDTEKKANELEKGRKALLDHDPSAPKL 639
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTP----E 137
++ +QVNTSGE SKSG++P+ L + HV CP+L+ SGLMTIG +TP E
Sbjct: 640 RIKIQVNTSGEASKSGVEPAHTLALCTHVLEHCPHLQLSGLMTIGAIARSKATTPETENE 699
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+F L R V +ALG +D+ ELSMGMS DFE AI GS VR+GS IFG R K
Sbjct: 700 DFVALRETRNRVAEALGWEQDRLELSMGMSADFEGAIRHGSDEVRVGSQIFGERPPKK 757
>gi|405122363|gb|AFR97130.1| alanine racemase [Cryptococcus neoformans var. grubii H99]
Length = 259
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 113/183 (61%), Gaps = 17/183 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDIKWHF+G LQSNK+K L VPNL ++E + + K+A+ L K++ + L V +Q
Sbjct: 78 LPEDIKWHFIGSLQSNKSK-LAASVPNLFILETLSSTKVADLLQKSLPPSRQSKLNVYLQ 136
Query: 89 VNTSGEESKSGIDP-----SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP----ENF 139
VNTSGE+SKSG+ P + + + HV +CP L+ G+MTIG D + P +F
Sbjct: 137 VNTSGEDSKSGLSPLPSNSAELVDLAVHVIEKCPGLKLLGIMTIGSWDASHDPTKPNPDF 196
Query: 140 RTLLNCRAEVCKALGMA-------EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
L RAE+ KAL ED+ ELSMGMS DF QAI+ GS+SVR+G+ IFG R
Sbjct: 197 ECLKRTRAELAKALAEKGVQGAPKEDELELSMGMSADFVQAIKEGSSSVRVGTRIFGERP 256
Query: 193 YAK 195
K
Sbjct: 257 KKK 259
>gi|195395082|ref|XP_002056165.1| GJ10370 [Drosophila virilis]
gi|194142874|gb|EDW59277.1| GJ10370 [Drosophila virilis]
Length = 254
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG---RKPLKVLVQ 88
DIKWH +GHLQSNK +L +PNL MV+ V +EK+AN +D A + L +PL+VLVQ
Sbjct: 86 DIKWHLIGHLQSNKINHVLK-LPNLHMVQTVDSEKLANKIDAAWAKLQPTPSEPLRVLVQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTSGE+ KSGID S+ + +++ +L+ G+MTIG DY++ P +F L+
Sbjct: 145 INTSGEDVKSGIDASAAPSLFKYISANLKHLQPVGIMTIGAYGFDYSNGPNPDFVALMQA 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+C+A M D ++SMGMS D+++AIEMGST VR+G+ IFG R
Sbjct: 205 HRAICEANDMPPDALQVSMGMSNDYDKAIEMGSTIVRVGTAIFGHR 250
>gi|45550861|ref|NP_651776.2| CG1983 [Drosophila melanogaster]
gi|28316960|gb|AAO39501.1| RE46560p [Drosophila melanogaster]
gi|45446716|gb|AAF57017.2| CG1983 [Drosophila melanogaster]
gi|220948568|gb|ACL86827.1| CG1983-PA [synthetic construct]
gi|220957842|gb|ACL91464.1| CG1983-PA [synthetic construct]
Length = 254
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 110/166 (66%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN---LGRKPLKVLVQ 88
DI+WHF+GH+QSNK +L VPNL M++ V +EK+A LD A S +PL+VL+Q
Sbjct: 86 DIRWHFIGHMQSNKINKILS-VPNLHMIQTVDSEKLATKLDAAWSKRQPTPEEPLQVLIQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTSGE+ KSGI+ + ++++ +L G+MTIG DY++ P +F +L+
Sbjct: 145 INTSGEDVKSGIEAKDAPALYQYIKSNLKHLNLMGIMTIGAFGFDYSNGPNPDFVSLMQV 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+C+A +A D +SMGMS DF++AIEMGST VR+GS+IFG R
Sbjct: 205 HRSICEAHSLAPDSVLVSMGMSNDFDKAIEMGSTVVRVGSSIFGHR 250
>gi|157136630|ref|XP_001663798.1| proline synthetase associated protein [Aedes aegypti]
gi|108880984|gb|EAT45209.1| AAEL003491-PA [Aedes aegypti]
Length = 258
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 118/190 (62%), Gaps = 17/190 (8%)
Query: 23 FIDKYNLP------EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-- 74
I+K N P +DI+WHF+GHLQ+NK ++ +PNL M++ V N K+A L+KA
Sbjct: 71 LIEKANDPRILEHCKDIRWHFIGHLQTNKINKIVN-LPNLHMIQTVHNAKLAEGLNKAWE 129
Query: 75 ---VSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM-- 129
V ++ L VL+Q+NTSGE+ K+G P+ + + V +CPNL+ G+MTIG
Sbjct: 130 KTKVEKPEKQQLNVLIQINTSGEDEKNGTQPAEAVNLYRFVTEKCPNLKCHGVMTIGRFG 189
Query: 130 PDYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
DY++ P +F L+ C ++C + ++SMGMS DF QAIEMGST VR+GS+IF
Sbjct: 190 HDYSTGPNPDFIELMKCHQDICSTFERDPAELQVSMGMSDDFVQAIEMGSTIVRVGSSIF 249
Query: 189 GPREYAKKQQ 198
G R AKK +
Sbjct: 250 GAR--AKKNE 257
>gi|195505095|ref|XP_002099361.1| GE23404 [Drosophila yakuba]
gi|194185462|gb|EDW99073.1| GE23404 [Drosophila yakuba]
Length = 254
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN---LGRKPLKVLVQ 88
DI+WHF+GH+QSNK +L VPNL M++ V +EK+A LD A S +PL+VL+Q
Sbjct: 86 DIRWHFIGHMQSNKINKVLS-VPNLRMIQTVDSEKLATKLDAAWSKQQPTPEEPLQVLIQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTSGE+ KSGI+ + + +R +L G+MTIG DY++ P +F +L+
Sbjct: 145 INTSGEDVKSGIEAKDAPALYQFIRSNLKHLNLLGIMTIGAYGFDYSNGPNPDFVSLMQV 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+C+A +A D +SMGMS DF++AIEMGST VR+GS+IFG R
Sbjct: 205 HRAICEAHSLAPDSVLVSMGMSNDFDKAIEMGSTVVRVGSSIFGHR 250
>gi|307202202|gb|EFN81689.1| Proline synthetase co-transcribed bacterial-like protein protein
[Harpegnathos saltator]
Length = 248
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 105/166 (63%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLVQ 88
+IKWHF+G+LQ NK +L VPNL ++E V NE++AN L+ + L ++VQ
Sbjct: 79 EIKWHFIGNLQRNKVNKILN-VPNLYIIETVDNERLANMLNNLWVKFRKNDDTKLNIMVQ 137
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNC 145
+NTS E+ K+G D +V+H+ CPNL+F GLMTIGM D + P +F LL C
Sbjct: 138 INTSQEKEKNGCDMVEAPALVKHIINNCPNLKFIGLMTIGMFGYDIANGPNPDFINLLKC 197
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R +C L + ELSMGMS D+E AIE+GSTSVR+GS IFG R
Sbjct: 198 RETICNKLEIDFKNIELSMGMSNDYEHAIELGSTSVRVGSAIFGIR 243
>gi|340725255|ref|XP_003400988.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Bombus terrestris]
Length = 248
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 112/171 (65%), Gaps = 9/171 (5%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLVQ 88
DI+WHF+GHLQ NK LL PNL ++E + NEK+A+ L+ + S + LKV+VQ
Sbjct: 79 DIRWHFIGHLQRNKINKLLT-TPNLYIIETIDNEKLASALNTSWSKIRVHENLKLKVMVQ 137
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNC 145
VNTS E+ K+G + + +V+H+ C +LEF GLMTIGM D P +F L C
Sbjct: 138 VNTSNEQEKNGCEITDVCTLVQHIIDNCTSLEFVGLMTIGMFGYDLAKGPNPDFLRLKEC 197
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
R +V K LG+ ++ ELSMGMS D+E A+E+GST++R+G+ IFG R AKK
Sbjct: 198 REKVSKELGIDLNKIELSMGMSNDYEHAVELGSTNIRVGTAIFGER--AKK 246
>gi|195108629|ref|XP_001998895.1| GI23376 [Drosophila mojavensis]
gi|193915489|gb|EDW14356.1| GI23376 [Drosophila mojavensis]
Length = 255
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 114/171 (66%), Gaps = 7/171 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG---RKPLKVLVQ 88
DIKWH +GHLQSNK +L +PNL M++ V +EK+AN +D A + +PL+VLVQ
Sbjct: 86 DIKWHLIGHLQSNKINKVLK-LPNLYMIQTVDSEKLANGIDAAWAKRQPEPTEPLRVLVQ 144
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
VNTSGE+ KSG+D S+ + +++ +L+ G+MTIG DY++ P +F LL
Sbjct: 145 VNTSGEDVKSGVDASAAPSLYQYISDNLKHLKPVGIMTIGAYGFDYSNGPNPDFVALLQV 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ E+CKA + D ++SMGMS D+++AIEMGST VR+G+ IFG R A +
Sbjct: 205 QREICKANSLPADAVQVSMGMSNDYDRAIEMGSTIVRVGTAIFGHRPKASE 255
>gi|94469206|gb|ABF18452.1| proline synthetase co-transcribed protein-like protein [Aedes
aegypti]
Length = 258
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 117/190 (61%), Gaps = 17/190 (8%)
Query: 23 FIDKYNLP------EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
I+K N P +DI+WHF+GHLQ+NK ++ +PNL M++ V N K+A L+KA
Sbjct: 71 LIEKANDPRILEHCKDIRWHFIGHLQTNKINKIVN-LPNLHMIQTVHNAKLAEGLNKAWE 129
Query: 77 NL-GRKP----LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM-- 129
KP L VL+Q+NTSGE+ K+G P+ + + V +CPNL+ G+MTIG
Sbjct: 130 KTKAEKPEKQHLNVLIQINTSGEDEKNGTQPAEAVNLYRFVTEKCPNLKCHGVMTIGRFG 189
Query: 130 PDYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
DY++ P +F L+ C ++C + ++SMGMS DF QAIEMGST VR+GS+IF
Sbjct: 190 HDYSTGPNPDFIELMKCHQDICSTFERDPAELQVSMGMSDDFVQAIEMGSTIVRVGSSIF 249
Query: 189 GPREYAKKQQ 198
G R AKK +
Sbjct: 250 GAR--AKKNE 257
>gi|350536147|ref|NP_001233040.1| uncharacterized protein LOC100169371 [Acyrthosiphon pisum]
gi|239791204|dbj|BAH72101.1| ACYPI009997 [Acyrthosiphon pisum]
Length = 278
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 111/170 (65%), Gaps = 5/170 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP-LKVLVQVN 90
DIKWHF+GH+Q NK +L VP L ++E + +EK+AN ++ L ++ LK++VQVN
Sbjct: 110 DIKWHFIGHIQKNKVSKVLM-VPGLHVIETIDSEKLANAVNDGWKKLNKESKLKIMVQVN 168
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---ENFRTLLNCRA 147
TS E+ K G+ + + + + + +C +LE GLMTIG Y + +F L++C+
Sbjct: 169 TSNEKEKFGVATDTVVDLCKFIIEKCDHLELIGLMTIGQYGYDCSQGPNPDFLALIDCKR 228
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+VC L + + ELSMGMS DFEQAIE+GST+VR+GS+IFG R +KQ
Sbjct: 229 DVCDKLKLNPSEIELSMGMSDDFEQAIELGSTNVRVGSSIFGFRARKEKQ 278
>gi|242010392|ref|XP_002425952.1| predicted protein [Pediculus humanus corporis]
gi|212509935|gb|EEB13214.1| predicted protein [Pediculus humanus corporis]
Length = 228
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 104/164 (63%), Gaps = 8/164 (4%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--RKPLKVLVQVNTS 92
WHF+GHLQ NK LL +PNL VE V +EK+A+ L+ S K + + +QVNTS
Sbjct: 65 WHFIGHLQRNKVNKLLS-IPNLFAVETVDSEKLADALNNYFSKTEDENKKINIFIQVNTS 123
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN-----FRTLLNCRA 147
GEESKSG P+ +V+H+ C +L GLMTIG D T ++ F+ L++C+
Sbjct: 124 GEESKSGCKPNETCNLVKHIIDNCKHLNVMGLMTIGKYDNYLTSQDKIDPDFQCLIDCKD 183
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+CK L + DQ ELSMGMS DFE+AI GS++VR+GS IFG R
Sbjct: 184 NICKNLNVTFDQFELSMGMSADFERAILAGSSNVRVGSLIFGGR 227
>gi|383851703|ref|XP_003701371.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Megachile rotundata]
Length = 248
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLVQV 89
I+WHF+GHLQ NK +L +PNL ++E V NEK+A+ L + + LKV+VQV
Sbjct: 80 IRWHFIGHLQRNKVNKVLS-IPNLHIIETVDNEKLASALHNSWPKFRKHDDSKLKVMVQV 138
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCR 146
NTS EE K+G D ++ V++V C NLEF GLMTIGM D T P +F L CR
Sbjct: 139 NTSKEEEKNGCDVANVCSFVKYVIDNCQNLEFVGLMTIGMFGYDLTKGPNPDFLCLKECR 198
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ + L + + ELSMGMS DFE AIE GSTSVR+G+ IFG R
Sbjct: 199 DKISRELNIDVTKIELSMGMSNDFEHAIEQGSTSVRVGTAIFGER 243
>gi|413949976|gb|AFW82625.1| hypothetical protein ZEAMMB73_317695 [Zea mays]
Length = 131
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 78/91 (85%)
Query: 51 GGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVE 110
GVPNLDMVE V +EKIAN LD+ V++LGRKPLKVLVQVNTSGEESK G+DPS C+ + +
Sbjct: 16 AGVPNLDMVESVDDEKIANRLDRVVADLGRKPLKVLVQVNTSGEESKFGVDPSGCMELAK 75
Query: 111 HVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
HV+L CPNL FSGLMTIGM DY+STPENF+
Sbjct: 76 HVKLNCPNLVFSGLMTIGMLDYSSTPENFKV 106
>gi|350404169|ref|XP_003487024.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Bombus impatiens]
Length = 248
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLVQ 88
DI+WHF+GHLQ NK LL PNL ++E + NEK+A+ L+ + S + LK++VQ
Sbjct: 79 DIRWHFIGHLQRNKINKLLT-TPNLYIIETIDNEKLASALNTSWSKIRVHENLKLKIMVQ 137
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNC 145
VNTS E+ KSG + + +V+H+ C +LEF GLMTIG D P +F L C
Sbjct: 138 VNTSNEQEKSGCEITDVCTLVQHIIDNCTSLEFVGLMTIGTFGHDLAKGPNPDFLCLKEC 197
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
R +V K LG+ ++ ELSMGMS D+E A+E+GST++R+G+ IFG R AKK
Sbjct: 198 REKVSKELGIDLNKIELSMGMSNDYEHAVELGSTNIRVGTAIFGER--AKK 246
>gi|312378867|gb|EFR25319.1| hypothetical protein AND_09463 [Anopheles darlingi]
Length = 255
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 112/178 (62%), Gaps = 12/178 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL------GRKPLK 84
+DI+WHF+GHLQSNK +L +PNL M++ V + K+A L+KA L + L
Sbjct: 80 KDIRWHFIGHLQSNKINKILN-LPNLHMIQTVHSTKLAEGLNKAWEKLKTEHPETQAKLN 138
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRT 141
VLVQ+NTSGE+ K+G+ P + + +V +CPNL G+MTIG DY++ P +F T
Sbjct: 139 VLVQINTSGEDEKNGVQPGDAVELYRYVLEQCPNLSCDGVMTIGRFGHDYSTGPNPDFGT 198
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
L+ C ++C + ++SMGMS DF QAIE GST VR+GS+IFG R AKK N
Sbjct: 199 LMKCHEQICCTFERDPAEVQVSMGMSDDFVQAIEEGSTIVRVGSSIFGAR--AKKPAN 254
>gi|194746150|ref|XP_001955547.1| GF16195 [Drosophila ananassae]
gi|190628584|gb|EDV44108.1| GF16195 [Drosophila ananassae]
Length = 249
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 111/166 (66%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKPLKVLVQ 88
DI+WHF+GH+QSNK +L VPNL M++ V ++K+A LD A S + +PLKVL+Q
Sbjct: 81 DIRWHFIGHMQSNKINKVLA-VPNLYMIQTVDSQKLATKLDAAWSKVQPPKDEPLKVLIQ 139
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTSGE+ KSGI+P + E ++ +L+ G+MTIG DY++ P +F +L+
Sbjct: 140 INTSGEDVKSGIEPKEAPALFEFIKSNLKHLKLMGIMTIGAYGFDYSNGPNPDFVSLMQV 199
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+C+ +A + +SMGMS D+++AIEMGST VR+G++IFG R
Sbjct: 200 HRSICEGNSLAPESVLVSMGMSNDYDRAIEMGSTVVRVGTSIFGYR 245
>gi|219129146|ref|XP_002184757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403866|gb|EEC43816.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 250
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 13 YKKSLIKLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLG----------GVPNLDMVEG 61
Y + L + +++++ D + WHF+G LQSNK LL V NL +E
Sbjct: 65 YAQELADKVPLLNQHDGNNDTVSWHFIGGLQSNKCNMLLKPFLEQAPNGPTVANL-TIET 123
Query: 62 VGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEF 121
V K+AN L+ AV + LK+ VQVNTSGE+SKSGI+P+ C+ + HV CP L+
Sbjct: 124 VATVKLANKLNHAVPE--PQTLKIFVQVNTSGEDSKSGIEPAECVALCRHVAQECPRLQL 181
Query: 122 SGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSV 181
GLMTIG S F L++ R +V AL D ELSMGMSGDF QAI G+T+V
Sbjct: 182 QGLMTIGAVGDLSC---FDVLVDLRRKVAIALERDTDDLELSMGMSGDFVQAIAAGATNV 238
Query: 182 RIGSTIFGPREY 193
R+GSTIFG R Y
Sbjct: 239 RVGSTIFGARNY 250
>gi|320581837|gb|EFW96056.1| Single-domain racemase, possibly non-specific due to the lack of
the second domain [Ogataea parapolymorpha DL-1]
Length = 236
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 103/166 (62%), Gaps = 6/166 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+G LQ+NK K L + NL VE + EK A L+ + G+ + V +Q
Sbjct: 71 LPKDIQWHFIGGLQTNKTKDLAKNIDNLYAVETIDTEKKARKLNDVRAQCGKPIINVYIQ 130
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG-MPDYTSTPEN--FRTLLNC 145
VNTSGEE KSGI P CL + + + CP L GLMTIG + S+ EN F+TL+
Sbjct: 131 VNTSGEEQKSGIAPEECLQLAKIIVNECPKLNLEGLMTIGSIVQSISSDENQDFKTLVEV 190
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ LG + ELSMGMS DFE+A+ GS+SVR+GS IFG R
Sbjct: 191 SKKLEAELGR---KLELSMGMSNDFEEALRQGSSSVRVGSNIFGSR 233
>gi|223995373|ref|XP_002287370.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976486|gb|EED94813.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 262
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 15/177 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLG--GVPNLDMVEGVGNEKIANHLDKAVSNLG------- 79
+P+D+ WHF+G LQSNKA L+ G+ L +E V K+A+ L++A
Sbjct: 86 MPDDVAWHFIGPLQSNKAAPLVKTVGLNKLACIETVSTIKLASKLNRAAETWNEESGSDE 145
Query: 80 RKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPE 137
+K L + +QVNTSGE+SKSG+ P + + +V+ + C L GLMTIG P DYT
Sbjct: 146 KKKLGIYIQVNTSGEDSKSGVTPGAEVIDLVKQITEECSTLSIDGLMTIGAPGDYTC--- 202
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F +L CR EV L + +LSMGMSGDFE AI G+TSVR+GSTIFG R+Y+
Sbjct: 203 -FDSLAKCREEVAGVLDKDPKELKLSMGMSGDFEVAIAKGATSVRVGSTIFGERDYS 258
>gi|195159394|ref|XP_002020564.1| GL14062 [Drosophila persimilis]
gi|198449718|ref|XP_002136950.1| GA26943 [Drosophila pseudoobscura pseudoobscura]
gi|194117333|gb|EDW39376.1| GL14062 [Drosophila persimilis]
gi|198130728|gb|EDY67508.1| GA26943 [Drosophila pseudoobscura pseudoobscura]
Length = 254
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 114/181 (62%), Gaps = 13/181 (7%)
Query: 23 FIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
++K PE DIKWHF+GHLQ+NK +L +PNL M++ V +EK+A LD A S
Sbjct: 71 LVEKSQHPEILAQCPDIKWHFIGHLQNNKINKILS-LPNLHMIQTVDSEKLATKLDAAWS 129
Query: 77 NL---GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--D 131
L PL+VL+Q+NTSGEE+KSGI+ + + + +L+ G+MTIG D
Sbjct: 130 KLKPDTEPPLRVLIQINTSGEEAKSGIETKEAPKLYQFISKNLKHLQLVGIMTIGAFGFD 189
Query: 132 YTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
Y++ P +F +L+ +C+A + + +SMGMS D+++AIEMGST VR+GS+IFG
Sbjct: 190 YSTGPNPDFVSLMEVHRSICEANSLTPNSVLVSMGMSNDYDRAIEMGSTVVRVGSSIFGH 249
Query: 191 R 191
R
Sbjct: 250 R 250
>gi|58271268|ref|XP_572790.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134114774|ref|XP_773685.1| hypothetical protein CNBH1400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256313|gb|EAL19038.1| hypothetical protein CNBH1400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229049|gb|AAW45483.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 259
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 112/183 (61%), Gaps = 17/183 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQSNK+K L VPNL ++E + + K+A+ L K++ + L V +Q
Sbjct: 78 LPDDIKWHFIGSLQSNKSK-LAASVPNLFILETLSSTKVADLLQKSLPPSRQSKLNVYLQ 136
Query: 89 VNTSGEESKSGIDP-----SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP----ENF 139
VNTSGE+SKSG+ P + + + HV +CP L+ G+MTIG D + P +F
Sbjct: 137 VNTSGEDSKSGLSPLPSNSAELVDLAMHVIEKCPGLKLLGIMTIGSWDASHDPTKPNPDF 196
Query: 140 RTLLNCRAEVCKALGM-------AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
L R E+ KAL ED+ ELSMGMS DF QAI+ GS+SVR+G+ IFG R
Sbjct: 197 ECLKRTRTELAKALAENGVQGAPKEDELELSMGMSADFVQAIKEGSSSVRVGTRIFGERP 256
Query: 193 YAK 195
K
Sbjct: 257 KKK 259
>gi|226479872|emb|CAX73232.1| putative Proline synthetase co-transcribed bacterial homolog
protein [Schistosoma japonicum]
Length = 253
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 10/183 (5%)
Query: 19 KLLRFIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
K++ DK + PE DI+WHF+G +Q+NK K L GV NL MVE + + A LD
Sbjct: 55 KIVHLYDKSHSPEVVKCCPDIRWHFIGRIQTNKIKRL-AGVNNLFMVETLDSISHAEILD 113
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + PLK+++QVNTSGE K GI PS + ++ +C NLE +GLM IG
Sbjct: 114 SLWALNHQMPLKIMIQVNTSGELQKGGIKPSEVIDFYSQIKAKCSNLEVAGLMCIGQEGV 173
Query: 131 DYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
D S P +F L+ CR ++ LG + ELSMGMS DFE AI++GST+VRIG+ IFG
Sbjct: 174 DINSGPNPDFVKLVQCREKLASHLGKSPFDFELSMGMSHDFEHAIQLGSTNVRIGTAIFG 233
Query: 190 PRE 192
R+
Sbjct: 234 QRD 236
>gi|449296622|gb|EMC92641.1| hypothetical protein BAUCODRAFT_77008 [Baudoinia compniacensis UAMH
10762]
Length = 274
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 101/179 (56%), Gaps = 12/179 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP-----L 83
LP+ ++WH +G LQ+NK K L VPNL V V K A+ L+K + K L
Sbjct: 86 LPKSVRWHMIGALQTNKCKPLAEQVPNLFCVSSVDTAKKADALEKGRGAIVEKQGLQSQL 145
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM-------PDYTSTP 136
+VLVQVNTSGE KSG++P + H+R C NL+ +GLMTIG +
Sbjct: 146 RVLVQVNTSGEAEKSGVEPDQAAELCRHIRDDCRNLKLAGLMTIGAIARSQAADSQDAIN 205
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+F TL R V K LG+ Q ELSMGMS DFE AI GS VRIG+TIFG R K
Sbjct: 206 EDFFTLRETRDNVAKELGIEPSQLELSMGMSSDFESAIAQGSDEVRIGTTIFGDRPAKK 264
>gi|303321047|ref|XP_003070518.1| hypothetical protein CPC735_062460 [Coccidioides posadasii C735
delta SOWgp]
gi|240110214|gb|EER28373.1| hypothetical protein CPC735_062460 [Coccidioides posadasii C735
delta SOWgp]
gi|320036044|gb|EFW17984.1| alanine racemase [Coccidioides posadasii str. Silveira]
Length = 280
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 107/186 (57%), Gaps = 23/186 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-------------- 74
LP +I+WHF+G LQSNK TL V L VE V +K A LDK
Sbjct: 85 LPPEIRWHFIGGLQSNKCVTLARDVRGLWAVESVDTQKKATLLDKGWGERLKNHSAQQQQ 144
Query: 75 --VSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MP 130
S + L+V VQVNTSGEESKSG++PS + + +R +CP L+ GLMTIG
Sbjct: 145 QEQSRAEPERLRVFVQVNTSGEESKSGVEPSQAVELCRFIREQCPRLKLEGLMTIGAIAR 204
Query: 131 DYTSTP----ENFRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGS 185
+TP E+F L R +C+ LG+ E++ ELSMGMS DFE AI MGS VR+GS
Sbjct: 205 SKATTPETQNEDFDCLRETRDRICQELGLEGEEKLELSMGMSEDFEGAIAMGSNEVRVGS 264
Query: 186 TIFGPR 191
TIFG R
Sbjct: 265 TIFGAR 270
>gi|195452638|ref|XP_002073440.1| GK13144 [Drosophila willistoni]
gi|194169525|gb|EDW84426.1| GK13144 [Drosophila willistoni]
Length = 249
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 113/166 (68%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP---LKVLVQ 88
+I+WHF+GHLQ+NK +L +PNL M++ V +EK+A LD A + L KP L+VL+Q
Sbjct: 81 EIRWHFIGHLQNNKINKVLS-LPNLHMIQTVDSEKLATRLDAAWAKLEPKPEQPLRVLIQ 139
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
+NTS E+ KSGI+ S + ++++ NL+ G+MTIG DY++ P +F +L+N
Sbjct: 140 INTSQEDVKSGIEISKAPSLYQYIKSNLKNLQLMGIMTIGAYGFDYSNGPNPDFVSLINV 199
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ +C+A + + +SMGMS D+++AIEMGST VRIG++IFG R
Sbjct: 200 QRSICEANNLNPESVLVSMGMSNDYDKAIEMGSTIVRIGTSIFGHR 245
>gi|195037419|ref|XP_001990158.1| GH18384 [Drosophila grimshawi]
gi|193894354|gb|EDV93220.1| GH18384 [Drosophila grimshawi]
Length = 249
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 112/166 (67%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKPLKVLVQ 88
DIKWH +GHLQ NK +L +PNL M++ V +EK+A+ LD A S L +PL++LVQ
Sbjct: 81 DIKWHLIGHLQGNKINKVLK-LPNLHMIQTVDSEKLADKLDAAWSKLEPPPSEPLRILVQ 139
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE-NFRTLLNC 145
VNTS E+ KSGID S+ + +++ +L+ G+MTIG DY++ P +F +L+
Sbjct: 140 VNTSEEDVKSGIDASAAPSLYQYISSNLKHLQPVGIMTIGAYGFDYSNGPNPDFVSLMAV 199
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
A++C+A + + ++SMGMS D+++AIEMGST VR+G+ IFG R
Sbjct: 200 HADICQANALPAEALQVSMGMSNDYDRAIEMGSTIVRVGTAIFGHR 245
>gi|119179922|ref|XP_001241476.1| hypothetical protein CIMG_08639 [Coccidioides immitis RS]
Length = 268
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 108/186 (58%), Gaps = 23/186 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-------------V 75
LP +I+WHF+G LQSNK TL V L VE V +K A LDK
Sbjct: 73 LPPEIRWHFIGGLQSNKCVTLARDVRGLWAVESVDTQKKATLLDKGWGERLKNHSAQQQQ 132
Query: 76 SNLGR---KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MP 130
GR + L+V VQVNTSGEESKSG++PS + + +R +CP L+ GLMTIG
Sbjct: 133 QQQGRAEPERLRVFVQVNTSGEESKSGVEPSQAVELCRFIREQCPRLKLEGLMTIGAIAR 192
Query: 131 DYTSTP----ENFRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGS 185
+TP E+F L R +C+ LG+ E++ ELSMGMS DFE AI MGS VR+GS
Sbjct: 193 SKATTPETQNEDFDCLRETRDRICQELGLEGEEKLELSMGMSEDFEGAIAMGSNEVRVGS 252
Query: 186 TIFGPR 191
TIFG R
Sbjct: 253 TIFGAR 258
>gi|392866645|gb|EAS30180.2| YggS family pyridoxal phosphate enzyme [Coccidioides immitis RS]
Length = 280
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 108/186 (58%), Gaps = 23/186 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-------------V 75
LP +I+WHF+G LQSNK TL V L VE V +K A LDK
Sbjct: 85 LPPEIRWHFIGGLQSNKCVTLARDVRGLWAVESVDTQKKATLLDKGWGERLKNHSAQQQQ 144
Query: 76 SNLGR---KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MP 130
GR + L+V VQVNTSGEESKSG++PS + + +R +CP L+ GLMTIG
Sbjct: 145 QQQGRAEPERLRVFVQVNTSGEESKSGVEPSQAVELCRFIREQCPRLKLEGLMTIGAIAR 204
Query: 131 DYTSTP----ENFRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGS 185
+TP E+F L R +C+ LG+ E++ ELSMGMS DFE AI MGS VR+GS
Sbjct: 205 SKATTPETQNEDFDCLRETRDRICQELGLEGEEKLELSMGMSEDFEGAIAMGSNEVRVGS 264
Query: 186 TIFGPR 191
TIFG R
Sbjct: 265 TIFGAR 270
>gi|256084107|ref|XP_002578274.1| proline synthetase associated protein [Schistosoma mansoni]
Length = 237
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 110/183 (60%), Gaps = 10/183 (5%)
Query: 19 KLLRFIDKYNLPE------DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
K++ DK PE DIKWHF+G +QSNK + L GV NL MVE V + A L+
Sbjct: 55 KIVHLYDKSYAPELINSCPDIKWHFIGRIQSNKIRKL-AGVNNLYMVETVDSMDHAEILN 113
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ PL +++QVNTSGE K+GI P+ + + + ++CPNL+ GLM IG
Sbjct: 114 STWGLNHQIPLNIMIQVNTSGEPQKNGIKPTEVINLYNQIEVKCPNLKVVGLMCIGQEGV 173
Query: 131 DYTSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
D S P +F L+ CR + +LG + ELSMGMS DFEQAI +GST+VRIG+ IFG
Sbjct: 174 DINSGPNPDFVKLVQCRELLASSLGKSPLDFELSMGMSHDFEQAIRLGSTNVRIGTAIFG 233
Query: 190 PRE 192
R+
Sbjct: 234 QRD 236
>gi|307183253|gb|EFN70122.1| Proline synthetase co-transcribed bacterial-like protein protein
[Camponotus floridanus]
Length = 248
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 108/167 (64%), Gaps = 7/167 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK---PLKVLV 87
++I+WHF+G+LQ NK +L VPNL ++E VGNEK+A+ L+ + + L V+V
Sbjct: 78 KEIQWHFIGNLQRNKVNKILS-VPNLYIIESVGNEKLADLLNNSWPKFRKSDNCKLNVMV 136
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRT-LLN 144
QVNTS EE K+G D +V+H+ C NL+F GLMTIGM D T+ P + T L+
Sbjct: 137 QVNTSQEEEKNGCDIVEVSTLVKHIINNCHNLKFMGLMTIGMFGYDITNGPNPYFTCLIK 196
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
CR ++ L + ELSMGMS D+E AIE+GST+VR+G+ IFG R
Sbjct: 197 CREKISNELAIDIKNIELSMGMSNDYEHAIELGSTNVRVGTAIFGNR 243
>gi|296412370|ref|XP_002835897.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629694|emb|CAZ80054.1| unnamed protein product [Tuber melanosporum]
Length = 264
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 107/177 (60%), Gaps = 9/177 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-----GRKP 82
+LP + WHF+G LQ+NK K L +PNL VE V K A+ L+K + L
Sbjct: 84 SLPTALNWHFIGALQTNKCKHLAERIPNLWAVESVDTVKKADALEKGRAALLSTSPSTPK 143
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM---PDYTSTP-EN 138
L+V VQVNTSGEESKSG P++ + +H+ C +L GLMTIG + P E+
Sbjct: 144 LRVYVQVNTSGEESKSGCQPTAAPVLAKHILEECKHLTLQGLMTIGAIARSRESDIPNED 203
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F TL R EV + +G+ DQ ELSMGMS DFEQA+ +G+++VR+G+ IFG R K
Sbjct: 204 FLTLKRVRDEVAQRVGIDSDQLELSMGMSEDFEQAVSLGTSNVRVGTIIFGQRPLKK 260
>gi|321261900|ref|XP_003195669.1| hypothetical protein CGB_H2200W [Cryptococcus gattii WM276]
gi|317462143|gb|ADV23882.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 264
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 111/188 (59%), Gaps = 22/188 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDIKWHF+G LQSNK+K L VPNL ++E + + K+A+ L K++ L V +Q
Sbjct: 78 LPEDIKWHFIGSLQSNKSK-LAASVPNLFILETLSSIKVADLLQKSLPPSRTSKLNVYLQ 136
Query: 89 VNTSGEESKSGIDP----------SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP-- 136
VNTSGE+SKSG+ P + + + HV +CP L+ G+MTIG D + P
Sbjct: 137 VNTSGEDSKSGLSPLPSSTADSKSTELVDLAVHVIEKCPGLKLLGIMTIGSWDASHDPTK 196
Query: 137 --ENFRTLLNCRAEVCKALGMA-------EDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
+F L RAE+ K L ED+ ELSMGMS DF QAI+ GS+SVR+G+ I
Sbjct: 197 PNPDFECLKRTRAELAKVLAEKGVPAAPREDELELSMGMSADFVQAIKEGSSSVRVGTRI 256
Query: 188 FGPREYAK 195
FG R K
Sbjct: 257 FGERPKKK 264
>gi|315041367|ref|XP_003170060.1| YggS family pyridoxal phosphate enzyme [Arthroderma gypseum CBS
118893]
gi|311345094|gb|EFR04297.1| YggS family pyridoxal phosphate enzyme [Arthroderma gypseum CBS
118893]
Length = 296
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 105/184 (57%), Gaps = 21/184 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-------------V 75
LP +I+WHF+G LQSNK TL V L VE V EK A+ LDK
Sbjct: 106 LPPEIRWHFIGGLQSNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKDKDSDA 165
Query: 76 SNLGRKPLKVLVQVNTSGEESKSGIDPSS-CLGIVEHVRLRCPNLEFSGLMTIGM--PDY 132
+PL+V VQVNTSGEE+KSGI P L + ++R +CP L+ GLMTIG
Sbjct: 166 DEHANRPLRVFVQVNTSGEENKSGIQPGEPTLELCRYIREKCPRLKLQGLMTIGAIARSK 225
Query: 133 TSTPEN----FRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
+TPEN F L + R V + L + ED ELSMGMS DFE AI MGS VR+GSTI
Sbjct: 226 ATTPENENEDFACLRDTRDMVVEKLSLKGEDTLELSMGMSNDFEGAITMGSNQVRVGSTI 285
Query: 188 FGPR 191
FG R
Sbjct: 286 FGAR 289
>gi|330794212|ref|XP_003285174.1| hypothetical protein DICPUDRAFT_28875 [Dictyostelium purpureum]
gi|325084895|gb|EGC38313.1| hypothetical protein DICPUDRAFT_28875 [Dictyostelium purpureum]
Length = 247
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 108/170 (63%), Gaps = 6/170 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA--VSNLGRKPLKVLVQV 89
+IKWH++G +QSNK K L V NL +VE V +++ + K+ + L +++QV
Sbjct: 78 EIKWHYIGSIQSNKIKHL-ASVKNLYVVETVEKKEVLDKFAKSWDLEKSNNTKLNIMIQV 136
Query: 90 NTSGEESKSGIDPSSCLGIVEHV--RLRCPN-LEFSGLMTIGMPDYTSTPENFRTLLNCR 146
NTS EESKSG P+ CL +V++ +C L F GLMTIG P+ T +F+ L+ C+
Sbjct: 137 NTSQEESKSGCHPNDCLELVKYCVEDEKCKEKLNFLGLMTIGSPNATEDQPDFKCLVECK 196
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ K G+ + +LSMGMS DFE AIE GSTSVR+GS IFG R+Y+KK
Sbjct: 197 NNIAKNTGIPLESIQLSMGMSHDFEPAIEFGSTSVRVGSAIFGDRDYSKK 246
>gi|308493557|ref|XP_003108968.1| hypothetical protein CRE_11760 [Caenorhabditis remanei]
gi|308247525|gb|EFO91477.1| hypothetical protein CRE_11760 [Caenorhabditis remanei]
Length = 244
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 100/171 (58%), Gaps = 6/171 (3%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--RKPLKVLVQ 88
++I+WHF+G +QSNK + P + VE V EK A DK S G PL+V VQ
Sbjct: 75 QEIRWHFIGQVQSNKIGKICNS-PGIWCVETVETEKHARLFDKEWSKYGATSSPLRVFVQ 133
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---ENFRTLLNC 145
VNTS EE+K GI S + E +R C NL+F G MTIG D + + +F L N
Sbjct: 134 VNTSEEENKGGIRISEAPKLAEFIRKECMNLKFDGFMTIGSFDNSHSSGVNPDFEKLFNV 193
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
R + + +G A + ELSMGMS DF QAI GSTSVR+GS +FG REY K
Sbjct: 194 RQQWAEQIGEAAESVELSMGMSDDFLQAIHQGSTSVRVGSKLFGAREYKNK 244
>gi|190346825|gb|EDK39002.2| hypothetical protein PGUG_03100 [Meyerozyma guilliermondii ATCC
6260]
Length = 256
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 102/170 (60%), Gaps = 10/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQ+ K K L G+ NL VE + + K LD A N + PL V +Q
Sbjct: 83 LPKDIKWHFIGGLQTGKCKDLAKGIDNLYAVETIDSLKKCKKLDTARLNAEKDPLNVYLQ 142
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL----RCPNLEFSGLMTIGMPDYTSTPE---NFRT 141
+NTSGEE KSG S + + VR C L+ GLMTIG + +++ E +F+
Sbjct: 143 INTSGEEQKSGFSLSDTKDLKDTVRFLMSDECKKLKLQGLMTIGSFEASTSDEENKDFKA 202
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L + E+ K + ELSMGMS DFEQAI+ GSTSVR+GS+IFG R
Sbjct: 203 LSTVKTELDKEFNL---DLELSMGMSNDFEQAIKQGSTSVRVGSSIFGAR 249
>gi|425777816|gb|EKV15972.1| Alanine racemase family protein, putative [Penicillium digitatum
PHI26]
gi|425782584|gb|EKV20483.1| Alanine racemase family protein, putative [Penicillium digitatum
Pd1]
Length = 268
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 103/181 (56%), Gaps = 18/181 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK------- 81
LP IKWHF+G LQSNK TL V L VE V +EK A LDK S G
Sbjct: 79 LPATIKWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKAKLLDKGWSERGSAMAATNHE 138
Query: 82 ---PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP-- 136
L++ +Q+NTSGEE+K+G++P+ + +VR +CP L+ GLMTIG +
Sbjct: 139 EDGKLRIYIQINTSGEENKAGVEPAGAAALCRYVREQCPRLQLQGLMTIGAIARSQVTTV 198
Query: 137 ----ENFRTLLNCRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
E+F L R V K LG+ D+ ELSMGMS DFE AI +GS VR+G+TIFG
Sbjct: 199 ENENEDFVCLRETRDRVVKELGLVGDEAGLELSMGMSSDFEGAIALGSDQVRVGTTIFGD 258
Query: 191 R 191
R
Sbjct: 259 R 259
>gi|17533025|ref|NP_495001.1| Protein F09E5.8 [Caenorhabditis elegans]
gi|1731185|sp|P52057.1|PROSC_CAEEL RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|351061015|emb|CCD68760.1| Protein F09E5.8 [Caenorhabditis elegans]
Length = 244
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 100/170 (58%), Gaps = 6/170 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVLVQV 89
DI+WHF+G +QSNK + P L VE V EK A DK S G PL+VLVQV
Sbjct: 76 DIRWHFIGQVQSNKIGKICNS-PGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQV 134
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT-STPEN--FRTLLNCR 146
NTSGE++K GI+ + E +R C NL+F G MTIG D + ++ EN F L R
Sbjct: 135 NTSGEDNKGGIEIGEAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLFKVR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ G + D ELSMGMS DF QAI G+TSVR+GS +FG REY K
Sbjct: 195 QTWAEQTGESADSVELSMGMSDDFLQAIHQGATSVRVGSKLFGAREYKNK 244
>gi|242794148|ref|XP_002482313.1| alanine racemase family protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218718901|gb|EED18321.1| alanine racemase family protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 340
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 106/181 (58%), Gaps = 18/181 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA---------VSNLG 79
LP I+WHF+G LQSNK +L V L VE V EK A LDK +
Sbjct: 148 LPRGIRWHFIGGLQSNKCTSLARDVRGLWAVESVDTEKKAKLLDKGWGERDFTSLSTEEQ 207
Query: 80 RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM----PDYTST 135
++ L+V VQVNTSGEE+KSG++P+ + ++R CP L+ GLMTIG + T+
Sbjct: 208 QQKLRVFVQVNTSGEENKSGVEPALTPALCRYIRDNCPGLKLQGLMTIGAIARSKETTAD 267
Query: 136 PEN--FRTLLNCRAEVCKALGMAE---DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
EN F TL+ R V + LG+ E D ELSMGMS DFE AI +GS VR+G+TIFG
Sbjct: 268 KENEDFVTLIETREVVVRELGLTEQEADDFELSMGMSSDFEGAIALGSDQVRVGTTIFGE 327
Query: 191 R 191
R
Sbjct: 328 R 328
>gi|340367806|ref|XP_003382444.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Amphimedon queenslandica]
Length = 250
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 104/177 (58%), Gaps = 10/177 (5%)
Query: 23 FIDKYNLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
I+K N P DI+WHFVGHLQ NK LL VP L M+E + ++A+ +D A+ +
Sbjct: 75 LIEKANHPLLSDLDIRWHFVGHLQRNKTNQLLSNVPKLWMIETIDTPRLASSVDGALQRI 134
Query: 79 G-RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD--YTST 135
K L+VLVQVNTSGEESK G P + EH+ C +L GLMTIG PD Y
Sbjct: 135 NPDKKLRVLVQVNTSGEESKHGCQPEDVPSLFEHMLSNCSSLNPIGLMTIGRPDHNYQMG 194
Query: 136 PE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
P +F + R + + E ELSMGMS D+E AI GST++RIGSTIFG R
Sbjct: 195 PNPDFELMKRLRDVLIGRFDLKE--VELSMGMSADYEHAIHEGSTNLRIGSTIFGKR 249
>gi|332022075|gb|EGI62400.1| Proline synthetase co-transcribed bacterial-like protein protein
[Acromyrmex echinatior]
Length = 252
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 8/173 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVLVQVN 90
I+WHF+GHLQ NK +L +PNL ++E V ++++AN L+ + + L V+VQVN
Sbjct: 80 IQWHFIGHLQRNKVNKVLS-IPNLYIIETVDSDRLANALNNSWPRFRKNNDKLNVMVQVN 138
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT----STPENFRTLLNCR 146
TS E+ K+G D + +V+HV C NL F GLMTIGM Y P+ F L+ CR
Sbjct: 139 TSQEKEKNGCDIAQLSTLVKHVVENCFNLNFMGLMTIGMYGYDIKDGPNPD-FICLIKCR 197
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
++ LG+ ELSMGMS D+E AIE+GST+VR+GS IFG R Q++
Sbjct: 198 EKIHDELGIDIKDIELSMGMSSDYEHAIELGSTNVRVGSVIFGIRPQKNNQKD 250
>gi|324521624|gb|ADY47891.1| Proline synthase co-transcribed bacterial protein [Ascaris suum]
Length = 277
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 102/162 (62%), Gaps = 5/162 (3%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+WHF+G +QSNK L + NL VE + +EK LDK ++ GR+ + V VQ NTS
Sbjct: 114 IEWHFIGQIQSNKIAKL-AAIQNLHCVETLSSEKHCTMLDKEMAKRGRR-INVYVQTNTS 171
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE---NFRTLLNCRAEV 149
E K G P S L + + +R +CP+L F+G MTIG + +S+ + +F L + R +
Sbjct: 172 NEPQKGGATPESALNVAQFIREQCPSLRFAGFMTIGSFEQSSSQQPNADFDVLFDVRKKF 231
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
C+ G++E +LSMGMS DFE A+ GSTSVR+G+TIFG R
Sbjct: 232 CERTGVSEGDYDLSMGMSHDFETAVLQGSTSVRVGTTIFGSR 273
>gi|398404412|ref|XP_003853672.1| hypothetical protein MYCGRDRAFT_38039 [Zymoseptoria tritici IPO323]
gi|339473555|gb|EGP88648.1| hypothetical protein MYCGRDRAFT_38039 [Zymoseptoria tritici IPO323]
Length = 276
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 105/184 (57%), Gaps = 21/184 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN--------LGR 80
LP I WH +G LQ+NK L VPNL V V K A+ L+K + LG
Sbjct: 83 LPRSINWHMIGALQTNKCTPLASSVPNLFCVSSVDTFKKADALEKGRATCVEREKIPLGD 142
Query: 81 K-----PLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS 134
K L+VLVQVNTSGE+SKSG+ P + + + HVR +CP+L +GLMTIG +
Sbjct: 143 KDSQEGKLRVLVQVNTSGEDSKSGVSPGTEAVSLCRHVREKCPHLHLAGLMTIGAIARSQ 202
Query: 135 TP-------ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
E+F L R EV K LG+ E++ ELSMGMS DFE A++ GS VR+G+ I
Sbjct: 203 EAATEEGRNEDFNKLREVRDEVAKELGVREEELELSMGMSADFEAAVKQGSDEVRVGTGI 262
Query: 188 FGPR 191
FG R
Sbjct: 263 FGER 266
>gi|255936135|ref|XP_002559094.1| Pc13g06610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583714|emb|CAP91730.1| Pc13g06610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 268
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 105/183 (57%), Gaps = 22/183 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP------ 82
LP IKWHF+G LQSNK TL VP L VE V +EK A LDK + R P
Sbjct: 79 LPASIKWHFIGGLQSNKCVTLARDVPGLWAVESVDSEKKAKLLDKGWGD--RSPEMAATN 136
Query: 83 ------LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG------MP 130
L+V VQVNTSGEE+K+GI+P+ + +VR +C L+ G MTIG +
Sbjct: 137 HDEDGRLRVYVQVNTSGEENKAGIEPAGAAALCRYVREQCSRLKLQGFMTIGAIARSRVT 196
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
+ E+F L + R V + LG+ D+ ELSMGMS DFE AI +GS VR+G+TIF
Sbjct: 197 TVENENEDFVCLSDTRDRVVRELGLVGDEAALELSMGMSSDFEGAIALGSDQVRVGTTIF 256
Query: 189 GPR 191
G R
Sbjct: 257 GDR 259
>gi|414588452|tpg|DAA39023.1| TPA: hypothetical protein ZEAMMB73_243423 [Zea mays]
Length = 401
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 78/99 (78%)
Query: 97 KSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMA 156
K G+DPS C+ + +HVRL PNL SGLM IGM DY+STP+NF+ L NCR EVCK LG+
Sbjct: 302 KIGVDPSGCVELAKHVRLNSPNLVLSGLMIIGMLDYSSTPKNFKALANCREEVCKELGIP 361
Query: 157 EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+Q EL +GMS DFEQAIEMG ++VR+GSTIFG REY K
Sbjct: 362 EEQGELFVGMSSDFEQAIEMGRSNVRVGSTIFGAREYPK 400
>gi|392578817|gb|EIW71944.1| hypothetical protein TREMEDRAFT_25035 [Tremella mesenterica DSM
1558]
Length = 248
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 15/175 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHFVG LQSNKAK L +PNL +E + + K+A+ L++++S+ R L V +Q
Sbjct: 73 LPKDIQWHFVGSLQSNKAK-LAASIPNLYCLETLSSIKVADLLERSISD--RPALNVYLQ 129
Query: 89 VNTSGEESKSGIDP-----SSCLGIVEHVRLRCPNLEFSGLMTIGM---PDYTSTPE-NF 139
VNTSGE+SKSG+ P L + HV+ CP+L GLMTIG TS P +F
Sbjct: 130 VNTSGEDSKSGLSPLTQDRDELLQLALHVKRSCPHLNLLGLMTIGSFGSSHDTSNPNPDF 189
Query: 140 RTLLNCRAEVCKALGMAEDQC---ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L R E+ + L A +C ELSMGMS DFEQA GS+SVR+G+ IFG R
Sbjct: 190 TCLKQSRDELRRKLVEAGLECNDLELSMGMSADFEQATREGSSSVRVGTRIFGER 244
>gi|74144222|dbj|BAE22181.1| unnamed protein product [Mus musculus]
Length = 326
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 100/148 (67%), Gaps = 5/148 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG-RKPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G +PLKV+VQ+N
Sbjct: 82 EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQIN 140
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRA 147
TSGE+SK G+ PS + +VEH++ CP+LEF GLMTIG D + P +F+ LL R
Sbjct: 141 TSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRR 200
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIE 175
E+C+ LG+ +Q ELSMGMS DF+ A +
Sbjct: 201 ELCEKLGIPVEQVELSMGMSMDFQHATD 228
>gi|326475792|gb|EGD99801.1| alanine racemase [Trichophyton tonsurans CBS 112818]
Length = 301
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 107/185 (57%), Gaps = 23/185 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--------------A 74
LP +I+WHF+G LQSNK TL V L VE V EK A+ LDK A
Sbjct: 110 LPPEIRWHFIGGLQSNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKESEA 169
Query: 75 VSNLGRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PD 131
L R+ L+V VQVNTSGEE+KSGI P L + +R +CP L+ GLMTIG
Sbjct: 170 GEPLDRR-LRVFVQVNTSGEENKSGIQPGEPTLELCRFIREKCPRLKLQGLMTIGAIARS 228
Query: 132 YTSTPEN----FRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGST 186
+TPEN F L + R V + L + ED ELSMGMS DFE AI MGS+ VR+GST
Sbjct: 229 KATTPENENEDFACLRDTRDMVVEKLSLKGEDTLELSMGMSNDFEGAIAMGSSQVRVGST 288
Query: 187 IFGPR 191
IFG R
Sbjct: 289 IFGAR 293
>gi|67594591|ref|XP_665811.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656651|gb|EAL35580.1| hypothetical protein Chro.50329 [Cryptosporidium hominis]
Length = 238
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 104/170 (61%), Gaps = 6/170 (3%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
NLP+ IKWHF+GHLQSNK KTLL + NL+++E V + K+A L+K GR LKV++
Sbjct: 68 NLPKSIKWHFIGHLQSNKVKTLLS-IDNLEVIETVDSIKLAQVLNKECQLQGRSVLKVMI 126
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QV TS E +KSG S L I E++ C NL+F GLMT+G D T E F ++N R
Sbjct: 127 QVKTSNEVNKSGAKISEALNIFEYIISECRNLKFQGLMTMGDSDVNLTSECFNKMVNLRN 186
Query: 148 EVCKALGMAED-----QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ + + + +C LSMG + D E AI+ + +RIGS IFG ++
Sbjct: 187 IINEKISKNGNYDQSIECRLSMGTTRDMEIAIKNHTNEIRIGSAIFGDKK 236
>gi|66357680|ref|XP_626018.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46227312|gb|EAK88262.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 245
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 104/170 (61%), Gaps = 6/170 (3%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
NLP+ IKWHF+GHLQSNK KTLL + NL+++E V + K+A L+K GR LKV++
Sbjct: 75 NLPKSIKWHFIGHLQSNKVKTLLS-IDNLEVIETVDSIKLAQVLNKECQLQGRSVLKVMI 133
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QV TS E +KSG S + I E++ C NL+F GLMT+G D T E F ++N R
Sbjct: 134 QVKTSNEVNKSGAQISEAINIFEYIISECRNLKFQGLMTMGDSDVNLTSECFNKMVNLRN 193
Query: 148 EVCKALGMAED-----QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ + + + +C LSMG + D E AI+ + VRIGS IFG ++
Sbjct: 194 IINEKISKNGNYDQSIECRLSMGTTRDMEIAIKNHTNEVRIGSAIFGDKK 243
>gi|326483235|gb|EGE07245.1| alanine racemase [Trichophyton equinum CBS 127.97]
Length = 301
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 106/185 (57%), Gaps = 23/185 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--------------A 74
LP +I+WHF+G LQSNK TL V L VE V EK A+ LDK A
Sbjct: 110 LPPEIRWHFIGGLQSNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKESEA 169
Query: 75 VSNLGRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PD 131
L R+ L+V VQVNTSGEE+KSGI P L + +R +CP L+ GLMTIG
Sbjct: 170 GEPLDRR-LRVFVQVNTSGEENKSGIQPGEPTLELCRFIREKCPRLKLQGLMTIGAIARS 228
Query: 132 YTSTPEN----FRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGST 186
+TPEN F L + R V + L + ED ELSMGMS DFE AI MGS VR+GST
Sbjct: 229 KATTPENENEDFACLRDTRDMVVEKLSLKGEDTLELSMGMSNDFEGAIAMGSNQVRVGST 288
Query: 187 IFGPR 191
IFG R
Sbjct: 289 IFGAR 293
>gi|384486641|gb|EIE78821.1| YggS family pyridoxal phosphate enzyme [Rhizopus delemar RA 99-880]
Length = 205
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 30/172 (17%)
Query: 22 RFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
R + LP+DI+WHF+GHLQSNK KT+ AV +
Sbjct: 54 RHFGENYLPKDIQWHFIGHLQSNKCKTV------------------------AVER--KD 87
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--F 139
PL+V VQVNTS EE+KSG+ P+ + + +H+ CPNL+ GLMTIGM + EN F
Sbjct: 88 PLRVFVQVNTSEEEAKSGVSPAGTVQVCKHIMEACPNLKLHGLMTIGMFGRDPSEENPDF 147
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ L+ C+ +V K LG+ + ELSMGMS D+ A+EMG+T+VR+G+TIFG R
Sbjct: 148 KCLVECKKQVEKELGVKD--LELSMGMSSDYIGALEMGATNVRVGTTIFGGR 197
>gi|443728686|gb|ELU14925.1| hypothetical protein CAPTEDRAFT_138840 [Capitella teleta]
Length = 264
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 102/164 (62%), Gaps = 5/164 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+I WHF+GHLQ NK +L VPNL MVE + +EK+A+ + A L LKV+VQ+N
Sbjct: 82 EIHWHFIGHLQRNKVNKVLA-VPNLYMVETIDSEKLASACNAAWERLENPHRLKVMVQIN 140
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY--TSTPE-NFRTLLNCRA 147
TS E++K G+ L + VR CP LE +G MTIG D+ + P +F+ L+ +
Sbjct: 141 TSEEKNKHGVRAKEALDLAAFVRNHCPQLELAGFMTIGAFDHDLSKGPNPDFQNLIKIKD 200
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
VC AL + ELSMGMS DFE AI GS++VR+GST+FG R
Sbjct: 201 TVCSALKLDPLTTELSMGMSNDFEHAIINGSSNVRVGSTLFGAR 244
>gi|146418812|ref|XP_001485371.1| hypothetical protein PGUG_03100 [Meyerozyma guilliermondii ATCC
6260]
Length = 256
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 100/170 (58%), Gaps = 10/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQ+ K K L G+ NL VE + + K LD A N + PL V +Q
Sbjct: 83 LPKDIKWHFIGGLQTGKCKDLAKGIDNLYAVETIDSLKKCKKLDTARLNAEKDPLNVYLQ 142
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL----RCPNLEFSGLMTIGMPDYTSTPE---NFRT 141
+NTSGEE KSG + + VR C L+ GLMTIG + ++ E +F+
Sbjct: 143 INTSGEEQKSGFSLLDTKDLKDTVRFLMSDECKKLKLQGLMTIGSFEASTLDEENKDFKA 202
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L + E+ K + ELSMGMS DFEQAI+ GSTSVR+GS+IFG R
Sbjct: 203 LSTVKTELDKEFNL---DLELSMGMSNDFEQAIKQGSTSVRVGSSIFGAR 249
>gi|67479513|ref|XP_655138.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56472254|gb|EAL49752.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449706421|gb|EMD46274.1| proline synthetase -associated protein, putative [Entamoeba
histolytica KU27]
Length = 229
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 106/166 (63%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G LQSNK K LL P+L V+ V + +IA L+KA N K + V+VQ+N+
Sbjct: 71 DIEWHFIGRLQSNKLK-LLVSTPHLKCVQTVHSIEIAEKLNKACIN-ANKTIDVMVQINS 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEE K G+ + +V+ V ++C NL F G+MTIGM + +NF T+ +C
Sbjct: 129 SGEEQKGGVSVEEAISVVKEV-MKCSNLHFIGIMTIGMVG--DSKKNFTTMKQLADTICS 185
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ E+SMGMS D+EQAIE+G+T VR+G+ +FG R+Y+K Q
Sbjct: 186 QEHLG--SIEISMGMSSDYEQAIELGATMVRVGTALFGARDYSKHQ 229
>gi|302496453|ref|XP_003010228.1| hypothetical protein ARB_03580 [Arthroderma benhamiae CBS 112371]
gi|291173769|gb|EFE29588.1| hypothetical protein ARB_03580 [Arthroderma benhamiae CBS 112371]
Length = 301
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 105/184 (57%), Gaps = 21/184 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV---------SNLG 79
LP +I+WHF+G LQSNK TL V L VE V EK A+ LDK N
Sbjct: 110 LPPEIRWHFIGGLQSNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKENGA 169
Query: 80 RKP----LKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDY 132
+P L+V VQVNTSGEE+KSGI P L + +R +CP L+ GLMTIG
Sbjct: 170 NEPPDRRLRVFVQVNTSGEENKSGIQPGEPTLELCRFIREKCPRLKLQGLMTIGAIARSK 229
Query: 133 TSTPEN----FRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
+TPEN F L + R V + L + ED ELSMGMS DFE AI MGS VR+GSTI
Sbjct: 230 ATTPENENEDFACLRDTRDMVVEKLSLKGEDTLELSMGMSNDFEGAIAMGSNQVRVGSTI 289
Query: 188 FGPR 191
FG R
Sbjct: 290 FGAR 293
>gi|440637935|gb|ELR07854.1| YggS family pyridoxal phosphate enzyme [Geomyces destructans
20631-21]
Length = 258
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 103/173 (59%), Gaps = 13/173 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKPLKV 85
LP+ IKWHF+G LQSNK K L +PNL +V + + K A LD ++L PL V
Sbjct: 79 LPKLIKWHFIGGLQSNKCKPLASTIPNLWVVSSIDSIKKATQLDLGRASLSPPATTPLYV 138
Query: 86 LVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPEN---- 138
VQVNTSGEE+KSG P + L + H++ C NL+ GLMTIG +TPEN
Sbjct: 139 HVQVNTSGEEAKSGCQPGTETLELCRHIKENCANLQLLGLMTIGAIARSQATTPENENED 198
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R + K LG + ELSMGMS DFE A+ MGS VR+GSTIFG R
Sbjct: 199 FVALTRERDALVKELG---GELELSMGMSDDFEGAVAMGSGEVRVGSTIFGTR 248
>gi|121714355|ref|XP_001274788.1| alanine racemase family protein, putative [Aspergillus clavatus
NRRL 1]
gi|119402942|gb|EAW13362.1| alanine racemase family protein, putative [Aspergillus clavatus
NRRL 1]
Length = 266
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 104/179 (58%), Gaps = 16/179 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK------- 81
LP I+WHF+G LQSNK L V L VE V +EK A+ LDK +
Sbjct: 79 LPPTIRWHFIGGLQSNKCVALARDVRGLWAVESVDSEKKASLLDKGWGERAAEVRATDAD 138
Query: 82 -PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPEN 138
L+V VQVNTSGEE+K+G++P++ + + VR +CP L G+MTIG +TPEN
Sbjct: 139 DRLRVFVQVNTSGEENKAGVEPAAAVALARFVREKCPRLRLQGVMTIGAIARSKATTPEN 198
Query: 139 ----FRTLLNCRAEVCKALGM--AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R + + LG+ E + ELSMGMS DFE AI +GS VR+G+TIFG R
Sbjct: 199 ENEDFVCLRETRDRIVRELGLQGPEAELELSMGMSEDFEGAIALGSDQVRVGTTIFGHR 257
>gi|402224822|gb|EJU04884.1| hypothetical protein DACRYDRAFT_75873 [Dacryopinax sp. DJM-731 SS1]
Length = 265
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 112/187 (59%), Gaps = 21/187 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP++IKWHF+G LQSNK K L +PNL VE + + K A+ K++ + PL+V +Q
Sbjct: 82 LPQEIKWHFIGALQSNKCKPL-ASIPNLYAVETLDSIKKADVFQKSLPDARSIPLRVFIQ 140
Query: 89 VNTSGEESKSGIDP-------SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---EN 138
+NTS EESKSG+ P S + + +H+ +CP L GLMTIG + ++T E+
Sbjct: 141 INTSSEESKSGLPPVSSTSSGSEAVELAKHIVQKCPALHLEGLMTIGSIEASTTQDENED 200
Query: 139 FRTLLNCRAEVCKAL-------GMAED-QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
F L + R + K L G +D + +LSMGMS DFE AI GS SVR+GS+IFG
Sbjct: 201 FDRLRDSRDNMEKTLREAGLLEGWGQDGKLQLSMGMSADFENAIMQGSDSVRVGSSIFGA 260
Query: 191 REYAKKQ 197
R KKQ
Sbjct: 261 R--PKKQ 265
>gi|327298199|ref|XP_003233793.1| alanine racemase [Trichophyton rubrum CBS 118892]
gi|326463971|gb|EGD89424.1| alanine racemase [Trichophyton rubrum CBS 118892]
Length = 301
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 104/184 (56%), Gaps = 21/184 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-------------V 75
LP +I+WHF+G LQSNK TL V L VE V EK A+ LDK
Sbjct: 110 LPPEIRWHFIGGLQSNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKENDA 169
Query: 76 SNLGRKPLKVLVQVNTSGEESKSGIDPSS-CLGIVEHVRLRCPNLEFSGLMTIGM--PDY 132
+ + L+V VQVNTSGEE+KSGI P L + +R +CP L+ GLMTIG
Sbjct: 170 NGPSDRRLRVFVQVNTSGEENKSGIQPGEPTLELCRFIREKCPRLKLQGLMTIGAIARSK 229
Query: 133 TSTPEN----FRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
+TPEN F L + R V + L + ED ELSMGMS DFE AI MGS VR+GSTI
Sbjct: 230 ATTPENENEDFACLRDTRDMVVEKLSLKGEDTLELSMGMSNDFEGAIAMGSNQVRVGSTI 289
Query: 188 FGPR 191
FG R
Sbjct: 290 FGAR 293
>gi|407044612|gb|EKE42712.1| pyridoxal phosphate enzyme, YggS family protein [Entamoeba nuttalli
P19]
Length = 229
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 7/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G LQSNK K LL P+L V+ V + +I L+KA N K + V+VQ+N+
Sbjct: 71 DIEWHFIGRLQSNKLK-LLVSTPHLKCVQTVHSIEIVEKLNKACIN-ANKTIDVMVQINS 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEE K G+ + +V+ V ++C NL F G+MTIGM + +NF T+ +C
Sbjct: 129 SGEEQKGGVSVEEAISVVKEV-MKCSNLHFIGIMTIGMVG--DSKKNFTTMKQLADTICS 185
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ + E+SMGMS D+EQAIE+G+T VR+G+ +FG R+Y+K Q
Sbjct: 186 QEHL--ESIEISMGMSSDYEQAIELGATMVRVGTALFGARDYSKHQ 229
>gi|300121038|emb|CBK21420.2| unnamed protein product [Blastocystis hominis]
Length = 618
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 106/179 (59%), Gaps = 19/179 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK-PLKVLV 87
LP+DI+WH +GHLQS K L+ +PNL ++E V + K+A L+ A R PL V V
Sbjct: 440 LPKDIRWHLIGHLQSGKCNQLIRKIPNLWVIESVDSIKLAEKLNSACLLAERADPLNVFV 499
Query: 88 QVNTSGEES----------KSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+V+TSGEE+ KSG P CL + E + CP L GLMT+G D P
Sbjct: 500 EVHTSGEETCALFVCLTSRKSGCLPEECLPLAEFILSNCPKLHLMGLMTVGKLDAPPEPY 559
Query: 138 NFRTLLNCRAEVCKA---LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F L N RA++ K LG ELSMGMSGD+E A++MGST++R+G+TIFG R Y
Sbjct: 560 -FEQLNNLRADLLKKHPELG----SLELSMGMSGDWETAVKMGSTNIRVGTTIFGARVY 613
>gi|341895789|gb|EGT51724.1| hypothetical protein CAEBREN_12934 [Caenorhabditis brenneri]
Length = 244
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 98/170 (57%), Gaps = 6/170 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVLVQV 89
+I+WHF+G +QSNK + P L VE V +EK A DK + G PL+VLVQV
Sbjct: 76 EIRWHFIGQVQSNKIGKICSS-PGLWCVETVESEKHAKLFDKEWAKHGATVLPLRVLVQV 134
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---ENFRTLLNCR 146
NTS EE+K GI S + E +R C NL F G MTIG D + T +F L R
Sbjct: 135 NTSEEENKGGIQISEAPKLAEFIRKECVNLRFGGFMTIGSFDNSHTSGVNPDFEKLFGVR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ + G + ELSMGMS DF QAI+ GSTSVR+GS +FG REY K
Sbjct: 195 KQWAEQTGEDVESVELSMGMSDDFIQAIQQGSTSVRVGSKLFGAREYKNK 244
>gi|341900390|gb|EGT56325.1| hypothetical protein CAEBREN_14457 [Caenorhabditis brenneri]
Length = 244
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 98/170 (57%), Gaps = 6/170 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVLVQV 89
+I+WHF+G +QSNK + P L VE V +EK A DK + G PL+VLVQV
Sbjct: 76 EIRWHFIGQVQSNKIGKICSS-PGLWCVETVESEKHAKLFDKEWAKHGATVLPLRVLVQV 134
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---ENFRTLLNCR 146
NTS EE+K GI S + E +R C NL F G MTIG D + T +F L R
Sbjct: 135 NTSEEENKGGIQISEAPKLAEFIRKECVNLRFGGFMTIGSFDNSHTSGVNPDFEKLFGVR 194
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ + G + ELSMGMS DF QAI+ GSTSVR+GS +FG REY K
Sbjct: 195 KQWAEQTGEDIESVELSMGMSDDFIQAIQQGSTSVRVGSKLFGAREYKNK 244
>gi|312066549|ref|XP_003136323.1| hypothetical protein LOAG_00735 [Loa loa]
gi|307768518|gb|EFO27752.1| YggS family pyridoxal phosphate enzyme [Loa loa]
Length = 265
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+G +QSNK L + NL VE + N+K ++ L+K ++ R LKVLVQVNT
Sbjct: 100 NIQWHFIGTIQSNKIAKL-AEINNLSCVETICNKKHSSILEKEIAKHNR-TLKVLVQVNT 157
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTP-ENFRTLLNCRAE 148
S E+ K G P + + E +R+ CP+L+FSG MTIG + + TP +F L R
Sbjct: 158 SKEKQKGGTTPEMAVELAEFIRVHCPSLKFSGFMTIGSFARNMSETPNRDFIELFKVRKT 217
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
C+ E+ ELSMGMS DFE AI +GSTSVRIG+ IFG R
Sbjct: 218 FCELTEENEENFELSMGMSNDFEAAIMLGSTSVRIGNAIFGHR 260
>gi|302667847|ref|XP_003025502.1| hypothetical protein TRV_00264 [Trichophyton verrucosum HKI 0517]
gi|291189616|gb|EFE44891.1| hypothetical protein TRV_00264 [Trichophyton verrucosum HKI 0517]
Length = 303
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 105/185 (56%), Gaps = 23/185 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--------------A 74
LP +I+WHF+G LQSNK TL V L VE V EK A+ LDK A
Sbjct: 112 LPPEIRWHFIGGLQSNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKENDA 171
Query: 75 VSNLGRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PD 131
L R+ L+V VQVNTSGEE+KSGI P L + +R CP L+ GLMTIG
Sbjct: 172 NQPLDRR-LRVFVQVNTSGEENKSGIQPGEPTLELCRFIRENCPRLKLQGLMTIGAIARS 230
Query: 132 YTSTPEN----FRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGST 186
+TPEN F L + R V + L + E+ ELSMGMS DFE AI MGS VR+GST
Sbjct: 231 KATTPENENEDFACLRDTRDMVVEKLSLKGEETLELSMGMSNDFEGAIAMGSNQVRVGST 290
Query: 187 IFGPR 191
IFG R
Sbjct: 291 IFGAR 295
>gi|385303919|gb|EIF47963.1| single-domain racemase possibly non-specific due to the lack of the
second domain [Dekkera bruxellensis AWRI1499]
Length = 240
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI WHF+G LQ+NK K L + NL VE + EK A L+ N+ + + V +Q
Sbjct: 72 LPKDINWHFIGGLQTNKTKDLAKHIDNLYAVETIDTEKKARKLNSTRINVDKPKINVFIQ 131
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP---ENFRTLLNC 145
VNTS EE KSGI P + + + CP L GLMTIG + + +F L
Sbjct: 132 VNTSEEEQKSGIAPEEXENLAKFIIDECPRLHLEGLMTIGSLSESKSXGLNHDFEKLQQX 191
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R +V L + + ELSMGMS D+E+AI+ GST VR+GSTIFG R
Sbjct: 192 REKVQSDLNI---KLELSMGMSSDYEEAIKQGSTEVRVGSTIFGAR 234
>gi|358370609|dbj|GAA87220.1| alanine racemase family protein [Aspergillus kawachii IFO 4308]
Length = 272
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 102/180 (56%), Gaps = 17/180 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--------R 80
LP IKWHF+G LQSNK TL P L VE V + K A+ LDK
Sbjct: 84 LPTTIKWHFIGGLQSNKCVTLARDTPALWAVESVDSTKKASLLDKGWGERSAEVKATNHE 143
Query: 81 KPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPE 137
+ L+V VQVNTSGEE+KSG++P L + +R +CP L G+MTIG +TPE
Sbjct: 144 ERLRVFVQVNTSGEENKSGVEPGDGALELCRFIRDKCPRLRLQGVMTIGAIARSKATTPE 203
Query: 138 N----FRTLLNCRAEVCKALGM--AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
N F L R V K LG+ E + ELSMGMS DFE AI +GS VR+G+TIFG R
Sbjct: 204 NENEDFVCLRETRDRVVKELGLLGEEAKLELSMGMSEDFEGAIALGSDEVRVGTTIFGDR 263
>gi|430814036|emb|CCJ28677.1| unnamed protein product [Pneumocystis jirovecii]
Length = 243
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 15/174 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-------- 80
LP D +WHF+G LQ+NK KTL+ + NL VE + + K A L+KA+ NL R
Sbjct: 67 LPSDCQWHFIGGLQTNKCKTLVS-ISNLWAVESLDSYKKAFALNKALMNLKRSTNMLDNN 125
Query: 81 -KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN- 138
+ L V VQVNTS EE K+G+ P + ++ C L GLMTIG +++ N
Sbjct: 126 DRKLNVYVQVNTSCEEGKNGVAPCDSEELCSYIINNCKELHLKGLMTIGSLSESNSEYNK 185
Query: 139 -FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F TL+ CR ++ ++LG+ + ELSMGMS DFE AI+MGST++R+G+ IFG R
Sbjct: 186 DFETLVKCRDKITESLGI---KLELSMGMSRDFELAIKMGSTNIRVGTNIFGIR 236
>gi|294942693|ref|XP_002783649.1| proline synthetase associated protein, putative [Perkinsus marinus
ATCC 50983]
gi|239896151|gb|EER15445.1| proline synthetase associated protein, putative [Perkinsus marinus
ATCC 50983]
Length = 246
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN-----LGRKPL 83
+P+DI+WH +GHLQ NK LL VP+L VE V + K+A+ L+ A + L +PL
Sbjct: 75 MPKDIQWHMIGHLQRNKVAPLLKAVPHLYAVESVDSIKLADKLNAAAATAMDEGLRSEPL 134
Query: 84 KVLVQVNTSGEESKSGIDPSSCL-GIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTL 142
V ++V TS E +K+G++ + + EH+ C L+ GLMT+ PD ENF L
Sbjct: 135 NVFIEVMTSDEITKTGVEKDEDIDALAEHIATHCQGLKLFGLMTVANPDLEIARENFERL 194
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
R + K L + + ELSMGM+ D AIE GST VR+GS IFG R Y K
Sbjct: 195 AAIRERLEKNLSLTY-KLELSMGMTHDMPIAIECGSTEVRVGSAIFGARNYKK 246
>gi|119486907|ref|XP_001262373.1| alanine racemase family protein, putative [Neosartorya fischeri
NRRL 181]
gi|119410530|gb|EAW20476.1| alanine racemase family protein, putative [Neosartorya fischeri
NRRL 181]
Length = 267
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 110/182 (60%), Gaps = 21/182 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA----------VSNL 78
LP I+WHF+G LQSNK TL V L VE + +EK A+ LD+ V++
Sbjct: 79 LPPSIRWHFIGGLQSNKCVTLARDVRGLWAVESIDSEKKASLLDRGWGERSEEVRGVAHE 138
Query: 79 GRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTST 135
R L+VLVQVNTSGEE+K+G+DP + + + +R +CP L+ G+MTIG +T
Sbjct: 139 DR--LRVLVQVNTSGEENKAGVDPVAGAVPLARFIREKCPRLKLQGVMTIGAIARSKATT 196
Query: 136 PE----NFRTLLNCRAEVCKALGMAED--QCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
PE +F L R + + LG+ D + ELSMGMS DFE AI++GS VR+G+TIFG
Sbjct: 197 PETENEDFVCLRETRDRIVRELGLQGDDAELELSMGMSEDFEGAIKLGSDEVRVGTTIFG 256
Query: 190 PR 191
R
Sbjct: 257 ER 258
>gi|170589287|ref|XP_001899405.1| Hypothetical UPF0001 protein F09E5.8 in chromosome II [Brugia
malayi]
gi|158593618|gb|EDP32213.1| Hypothetical UPF0001 protein F09E5.8 in chromosome II, putative
[Brugia malayi]
Length = 268
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+G +QSNK L + L VE + N+K A+ L+K V+ RK LKVLVQVNT
Sbjct: 100 NIRWHFIGTVQSNKIAKL-AEIDTLSCVETICNKKHASMLEKEVAKHNRK-LKVLVQVNT 157
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTP-ENFRTLLNCRAE 148
S E+ K G P + + E +R+ CP+L+F G MTIG + TP +F L R
Sbjct: 158 SKEKQKGGTTPEMAIELAEFIRIHCPSLKFGGFMTIGSFAHSVSETPNRDFIQLFEVRKR 217
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
C+ E LSMGMS DFE AI +GSTSVR+GS IFG R
Sbjct: 218 FCELTQENERDFALSMGMSDDFEAAIMLGSTSVRVGSAIFGHR 260
>gi|424045009|ref|ZP_17782578.1| hypothetical protein VCHENC03_0220 [Vibrio cholerae HENC-03]
gi|408887052|gb|EKM25694.1| hypothetical protein VCHENC03_0220 [Vibrio cholerae HENC-03]
Length = 236
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V V KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTVDRAKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 120 EL--KPLQVLIQVNTSGEESKSGVSDAEIFELAELIS-RLPNLTLRGLMSIPANVPDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLRAFKQLEALKQKLAQQY---PDVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQ 197
KKQ
Sbjct: 234 KKQ 236
>gi|350639210|gb|EHA27564.1| hypothetical protein ASPNIDRAFT_135497 [Aspergillus niger ATCC
1015]
Length = 267
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 101/180 (56%), Gaps = 17/180 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--------R 80
LP IKWHF+G LQSNK TL P L VE V + K A+ LDK
Sbjct: 79 LPTTIKWHFIGGLQSNKCVTLARDTPALWAVESVDSTKKASLLDKGWGERSAEVKETNHE 138
Query: 81 KPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPE 137
+ L+V VQVNTSGEE+KSG++P L + +R +CP L G+MTIG +TPE
Sbjct: 139 ERLRVFVQVNTSGEENKSGVEPGDGALELCRFIRDKCPRLRLQGVMTIGAIARSKATTPE 198
Query: 138 N----FRTLLNCRAEVCKALGM--AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
N F L R V K LG+ E ELSMGMS DFE AI +GS VR+G+TIFG R
Sbjct: 199 NENEDFVCLRETRDRVVKELGLLGEEAALELSMGMSEDFEGAIALGSDEVRVGTTIFGDR 258
>gi|145248690|ref|XP_001400684.1| alanine racemase family protein [Aspergillus niger CBS 513.88]
gi|134081351|emb|CAK41854.1| unnamed protein product [Aspergillus niger]
Length = 271
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 101/180 (56%), Gaps = 17/180 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--------R 80
LP IKWHF+G LQSNK TL P L VE V + K A+ LDK
Sbjct: 83 LPTTIKWHFIGGLQSNKCVTLARDTPALWAVESVDSTKKASLLDKGWGERSAEVKETNHE 142
Query: 81 KPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPE 137
+ L+V VQVNTSGEE+KSG++P L + +R +CP L G+MTIG +TPE
Sbjct: 143 ERLRVFVQVNTSGEENKSGVEPGDGALELCRFIRDKCPRLRLQGVMTIGAIARSKATTPE 202
Query: 138 N----FRTLLNCRAEVCKALGM--AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
N F L R V K LG+ E ELSMGMS DFE AI +GS VR+G+TIFG R
Sbjct: 203 NENEDFVCLRETRDRVVKELGLLGEEAALELSMGMSEDFEGAIALGSDEVRVGTTIFGDR 262
>gi|390600701|gb|EIN10096.1| hypothetical protein PUNSTDRAFT_52184 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 269
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 108/192 (56%), Gaps = 24/192 (12%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK LP DI+WHF+G LQSNKAK +L +PNL V+ V + K A+ LDKA+SN
Sbjct: 73 LVDKAAQLPTDIRWHFIGTLQSNKAK-ILAAIPNLYAVQTVASVKAASGLDKALSNDRTA 131
Query: 82 PLKVLVQVNTSGEESKSGIDP---------SSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
PL VL+QVNTSGE++KSG+ P + + + ++ CP L GLMTIG
Sbjct: 132 PLNVLIQVNTSGEDAKSGLSPLTPSTASEDAQLVTLARYIVTSCPRLRLQGLMTIGSVSE 191
Query: 133 TSTPE----NFRTLLNCRAEVCKAL--------GMAED-QCELSMGMSGDFEQAIEMGST 179
+ + +F TL R + + L ED + LSMGMS DFE A+ GS
Sbjct: 192 SLAKDKPNHDFETLKETRDSLERILRNDRMVPATWGEDGKLLLSMGMSSDFEAALSAGSD 251
Query: 180 SVRIGSTIFGPR 191
VR+G+ IFG R
Sbjct: 252 IVRVGTGIFGER 263
>gi|317157756|ref|XP_003190876.1| alanine racemase family protein [Aspergillus oryzae RIB40]
Length = 282
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 109/187 (58%), Gaps = 20/187 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK------- 81
LP IKWHF+G LQSNK TL V L VE V +EK A+ LDK +
Sbjct: 94 LPPTIKWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASLLDKGWGERSEELRATDQE 153
Query: 82 -PLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTP- 136
L+V VQVNTSGEE+KSG+DP S + + +R +CP L+ G+MTIG +TP
Sbjct: 154 SQLRVFVQVNTSGEENKSGVDPVSGAVSLCRFIREKCPRLKLQGVMTIGAIARSKATTPE 213
Query: 137 ---ENFRTLLNCRAEVCKALGM-AED-QCELSMGMSGDFEQAIEMGSTSVRIGSTIFG-- 189
E+F L R + + L + ED + ELSMGMS DFE AI +GS VR+G+TIFG
Sbjct: 214 TENEDFVCLRETRDRIVRELKLEGEDARLELSMGMSEDFEGAIALGSDEVRVGTTIFGER 273
Query: 190 -PREYAK 195
P++ AK
Sbjct: 274 PPKDQAK 280
>gi|339256268|ref|XP_003370492.1| pyridoxal phosphate enzyme, YggS family [Trichinella spiralis]
gi|316964562|gb|EFV49608.1| pyridoxal phosphate enzyme, YggS family [Trichinella spiralis]
Length = 256
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN------LGRKPLKV 85
DI+WHF+GHLQ NK + L+ VPNL +VE V + K+A L++ LG+ + V
Sbjct: 81 DIRWHFIGHLQLNKVRKLIENVPNLHVVETVDSVKLAETLNRVARGRVDQTLLGK--INV 138
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRTLL 143
++QVNTSGE K G +P L + V CP L+ GLMTIG + F L
Sbjct: 139 MLQVNTSGEIQKHGCEPEQVLQLARMVVQDCPFLQLIGLMTIGTASSCAEVARGEFSKLF 198
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
R ++C L Q ELSMGMS DF++AI GS+SVR+GS IFG R+
Sbjct: 199 QIRNQICTDLDWEVGQLELSMGMSNDFQEAICCGSSSVRVGSAIFGSRD 247
>gi|424036634|ref|ZP_17775614.1| hypothetical protein VCHENC02_1933 [Vibrio cholerae HENC-02]
gi|408896414|gb|EKM32513.1| hypothetical protein VCHENC02_1933 [Vibrio cholerae HENC-02]
Length = 208
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 37 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS 91
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 92 EL--KPLQVLIQVNTSGEESKSGVADAEIFELAELIS-RLPNLTLRGLMSIPANVPDYES 148
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 149 QLRAFKQLEELKQKLAQQY---PDVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 205
Query: 195 KKQ 197
K+Q
Sbjct: 206 KQQ 208
>gi|426199541|gb|EKV49466.1| hypothetical protein AGABI2DRAFT_184200 [Agaricus bisporus var.
bisporus H97]
Length = 271
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 108/197 (54%), Gaps = 31/197 (15%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK LP DI+WHF+G LQSNKAK +L +PNL V+ + K A+ L+KA+S +
Sbjct: 72 LVDKAAILPRDIRWHFIGALQSNKAK-ILASIPNLYCVQTLAFAKTASALNKAISE--DR 128
Query: 82 PLKVLVQVNTSGEESKSGIDP---------SSCLGIVEHVRLRCPNLEFSGLMTIGM--- 129
L+VLVQVNTSGEESKSG+ P S +V HV +CP L F GLMTIG
Sbjct: 129 TLRVLVQVNTSGEESKSGLPPLGPDTHVGTSELAQLVVHVVTKCPRLRFEGLMTIGALEQ 188
Query: 130 ---PDYTSTPENFRTLLNCRAEVCKAL------------GMAEDQCELSMGMSGDFEQAI 174
T +F L R + + L A + LSMGMSGDFE AI
Sbjct: 189 SLNASETEKNADFERLKETRDRLKEFLIDNAEQTGHSWGHEASGKLTLSMGMSGDFEAAI 248
Query: 175 EMGSTSVRIGSTIFGPR 191
+ GS VR+G+ IFG R
Sbjct: 249 KAGSDIVRVGTGIFGQR 265
>gi|269960444|ref|ZP_06174817.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834871|gb|EEZ88957.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 236
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 111/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V V KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTVDRAKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 120 EL--KPLQVLIQVNTSGEESKSGVSDAEIFELAELIS-RLPNLTLRGLMSIPANVPDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLRAFKQLEALKQKLAQQY---PDVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQ 197
K+Q
Sbjct: 234 KQQ 236
>gi|70982173|ref|XP_746615.1| alanine racemase family protein [Aspergillus fumigatus Af293]
gi|66844238|gb|EAL84577.1| alanine racemase family protein, putative [Aspergillus fumigatus
Af293]
gi|159122150|gb|EDP47272.1| alanine racemase family protein, putative [Aspergillus fumigatus
A1163]
Length = 286
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 17/180 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK------- 81
LP I+WHF+G LQSNK TL V L VE V +EK A+ LD+ +
Sbjct: 98 LPPSIRWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASLLDRGWGERSEEVRGVALE 157
Query: 82 -PLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE 137
L+V VQVNTSGEE+K+G+DP + + + +R +CP L+ G+MTIG +TPE
Sbjct: 158 DRLRVFVQVNTSGEENKAGVDPVAGAVPLARFIREKCPRLKLQGVMTIGAIARSKATTPE 217
Query: 138 ----NFRTLLNCRAEVCKALGMAED--QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F L R + + LG+ D + ELSMGMS DFE AI++GS VR+G+TIFG R
Sbjct: 218 TENEDFVCLRETRDRIVRELGLQGDDAELELSMGMSEDFEGAIKLGSDEVRVGTTIFGER 277
>gi|409078532|gb|EKM78895.1| hypothetical protein AGABI1DRAFT_114450 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 271
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 109/197 (55%), Gaps = 31/197 (15%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK LP DI+WHF+G LQSNKAK +L +PNL V+ + + K A+ L+KA+ +
Sbjct: 72 LVDKAAILPRDIRWHFIGALQSNKAK-ILASIPNLYCVQTLASAKTASALNKAIPE--DR 128
Query: 82 PLKVLVQVNTSGEESKSGIDP---------SSCLGIVEHVRLRCPNLEFSGLMTIGM--- 129
L+VLVQVNTSGEESKSG+ P S +V HV +CP L F GLMTIG
Sbjct: 129 ILRVLVQVNTSGEESKSGLPPLGPDTHVGTSELAQLVVHVVTKCPRLRFEGLMTIGALEQ 188
Query: 130 ---PDYTSTPENFRTLLNCRAEVCKALGMAEDQCE------------LSMGMSGDFEQAI 174
T +F TL R + + L +Q LSMGMSGDFE AI
Sbjct: 189 SLNASETEKNADFETLKETRDRLKEFLIDNAEQTGHSWGHEVSGKLILSMGMSGDFEAAI 248
Query: 175 EMGSTSVRIGSTIFGPR 191
+ GS VR+G+ IFG R
Sbjct: 249 KAGSDIVRVGTGIFGQR 265
>gi|424031938|ref|ZP_17771361.1| hypothetical protein VCHENC01_0164 [Vibrio cholerae HENC-01]
gi|408876648|gb|EKM15759.1| hypothetical protein VCHENC01_0164 [Vibrio cholerae HENC-01]
Length = 236
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 120 EL--KPLQVLIQVNTSGEESKSGVADAEIFELAELIS-RLPNLTLRGLMSIPANVPDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLRAFKQLEELKQKLAQQYP---DVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQ 197
K+Q
Sbjct: 234 KQQ 236
>gi|153835263|ref|ZP_01987930.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|388602658|ref|ZP_10161054.1| hypothetical protein VcamD_22510 [Vibrio campbellii DS40M4]
gi|148868238|gb|EDL67378.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 236
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 120 EL--KPLQVLIQVNTSGEESKSGVADAEIFELAELIS-RLPNLTLRGLMSIPANVPDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLRAFKQLEELKQKLAQQYP---DVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQ 197
K+Q
Sbjct: 234 KQQ 236
>gi|350532457|ref|ZP_08911398.1| hypothetical protein VrotD_15079 [Vibrio rotiferianus DAT722]
Length = 236
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 120 EL--KPLQVLIQVNTSGEESKSGVADAEIFELAELIS-RLPNLTLRGLMSIPANVPDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLRAFKQLEELKQKLAQQYP---DVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQ 197
K+Q
Sbjct: 234 KQQ 236
>gi|340521582|gb|EGR51816.1| predicted protein [Trichoderma reesei QM6a]
Length = 256
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 102/179 (56%), Gaps = 21/179 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKP----L 83
LP I WHF+G LQS K L +PNL V V + K A+ L A V+ + P L
Sbjct: 73 LPSSINWHFIGGLQSTHCKHL-ARIPNLFCVSSVDSSKKAHLLSNARVAAIAANPEIAKL 131
Query: 84 KVLVQVNTSGEESKSGIDPSS-----CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTP 136
V VQVNTSGEE+KSG +P C IVE +CP L+F GLMTIG +TP
Sbjct: 132 GVHVQVNTSGEEAKSGCEPGQETVDLCREIVE----KCPGLKFLGLMTIGAIARSKATTP 187
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
EN F TL R V K LG+ + ELSMGMS DFE AI GST VR+GSTIFG R
Sbjct: 188 ENQNEDFETLRQQRDLVAKELGLDPGELELSMGMSEDFEGAIAQGSTEVRVGSTIFGQR 246
>gi|123455783|ref|XP_001315632.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898315|gb|EAY03409.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 227
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP D ++H +GHLQSNK L V NL M++ + ++++A +DK N RKPL+VL+Q
Sbjct: 64 LP-DAQFHMIGHLQSNKVAKLCK-VENLVMIQSIDSKELATKVDKQYVN--RKPLEVLIQ 119
Query: 89 VNTSGEESKSGI-DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
+NTS E KSGI + + + + + C NL+F G+MTIG S +F L+ R
Sbjct: 120 INTSAEPQKSGIANGAEASELAKFIVENCHNLKFRGVMTIGETGEAS--RDFACLVEERR 177
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ LGM + ELSMGMS D+E A++MG+T VR+GS+IFGPR Y K+
Sbjct: 178 RIAGELGMKPEDLELSMGMSADYELALKMGATFVRVGSSIFGPRIYPNKK 227
>gi|444428097|ref|ZP_21223450.1| hypothetical protein B878_19100 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444238663|gb|ELU50258.1| hypothetical protein B878_19100 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 236
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 110/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I PDY S
Sbjct: 120 EL--KPLQVLIQVNTSGEESKSGVADAEIFELAELIS-RLPNLTLRGLMSIPANEPDYKS 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLRAFKQLEELKQKLAQQYP---DVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQ 197
K+Q
Sbjct: 234 KQQ 236
>gi|336370406|gb|EGN98746.1| hypothetical protein SERLA73DRAFT_181371 [Serpula lacrymans var.
lacrymans S7.3]
Length = 289
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 26/190 (13%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP DI+WHF+G LQSNK+K +L +PN+ ++ V + + A L+KA+ PL VL+
Sbjct: 96 QLPVDIRWHFIGTLQSNKSK-ILASIPNIYAIQTVTSARAATALNKALPIERTSPLNVLL 154
Query: 88 QVNTSGEESKSGIDP--------SSCLGIVEHVRLRCPNLEFSGLMTIG-----MPDYTS 134
QVNTSGE+ KSG+ P S + + H+ CP L GLMTIG +
Sbjct: 155 QVNTSGEDVKSGLPPLVESSPSDSELVQLARHIITTCPRLRLQGLMTIGSLTESLASSEK 214
Query: 135 TPENFRTLLNCRAEVCKALGMAED------------QCELSMGMSGDFEQAIEMGSTSVR 182
E+F TL R E+ + L + E+ + LSMGMS DFE A++ GS VR
Sbjct: 215 ANEDFETLKGTRDELHRQLELDENLQKGGGEWGEDGKLLLSMGMSSDFESALKAGSDIVR 274
Query: 183 IGSTIFGPRE 192
+G++IFG R+
Sbjct: 275 VGTSIFGARQ 284
>gi|308161351|gb|EFO63803.1| PLP dependent protein [Giardia lamblia P15]
Length = 220
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 117/182 (64%), Gaps = 11/182 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + L+K R + N+ DI+WHF+GHLQ+NKA+ + +PN +V+ V ++K+A L
Sbjct: 47 YVQELVKKTRAVQ--NVANDIEWHFIGHLQTNKARDI-ASIPNC-VVQTVDSDKLARRLS 102
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
D +L PL+V++Q+NTSGE +KSG + + + + + P L GLMTIG P+
Sbjct: 103 DLRPGDL--DPLRVMIQINTSGELTKSGCTVDGAIELAQVIGV-LPRLRLIGLMTIGAPN 159
Query: 132 YTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
S+ ++F+ L++ R + KA+ + E++ ELSMGMS D++ A+ MG+ VR+GS IFG R
Sbjct: 160 --SSADSFQALIDARNVIEKAIKL-EEKLELSMGMSSDYQLAVRMGADYVRVGSAIFGER 216
Query: 192 EY 193
Y
Sbjct: 217 TY 218
>gi|328352082|emb|CCA38481.1| UPF0001 protein PM0112 [Komagataella pastoris CBS 7435]
Length = 246
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 100/168 (59%), Gaps = 9/168 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQ+NK K L + NL VE + + K AN L+ + + + + V +Q
Sbjct: 77 LPKDIKWHFIGGLQTNKCKDLATRIDNLYAVETIDSIKKANKLNSS-RDASKPKINVFIQ 135
Query: 89 VNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP----ENFRTLL 143
VNTSGEE KSGI L + + ++ CPNL GLMTIG ++ ++F L
Sbjct: 136 VNTSGEEQKSGISSYDDLLALAKVIKNDCPNLTLKGLMTIGSIQQSTAAGERNKDFDQLT 195
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ LG ELSMGMS DFEQAI GSTSVR+GS+IFG R
Sbjct: 196 AHNEKLESDLGTT---LELSMGMSSDFEQAIRQGSTSVRVGSSIFGAR 240
>gi|254568594|ref|XP_002491407.1| Single-domain racemase, possibly non-specific due to the lack of
the second domain [Komagataella pastoris GS115]
gi|238031204|emb|CAY69127.1| Single-domain racemase, possibly non-specific due to the lack of
the second domain [Komagataella pastoris GS115]
Length = 269
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 100/168 (59%), Gaps = 9/168 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQ+NK K L + NL VE + + K AN L+ + + + + V +Q
Sbjct: 100 LPKDIKWHFIGGLQTNKCKDLATRIDNLYAVETIDSIKKANKLNSS-RDASKPKINVFIQ 158
Query: 89 VNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP----ENFRTLL 143
VNTSGEE KSGI L + + ++ CPNL GLMTIG ++ ++F L
Sbjct: 159 VNTSGEEQKSGISSYDDLLALAKVIKNDCPNLTLKGLMTIGSIQQSTAAGERNKDFDQLT 218
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ LG ELSMGMS DFEQAI GSTSVR+GS+IFG R
Sbjct: 219 AHNEKLESDLGTT---LELSMGMSSDFEQAIRQGSTSVRVGSSIFGAR 263
>gi|156975833|ref|YP_001446740.1| hypothetical protein VIBHAR_03578 [Vibrio harveyi ATCC BAA-1116]
gi|156527427|gb|ABU72513.1| hypothetical protein VIBHAR_03578 [Vibrio harveyi ATCC BAA-1116]
Length = 236
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 110/183 (60%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+ L+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 120 EL--KPLQALIQVNTSGEESKSGVADAEIFELAELIS-RLPNLTLRGLMSIPANVPDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + D LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLRAFKQLEELKQKLAQQY---PDVDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQ 197
K+Q
Sbjct: 234 KQQ 236
>gi|440294994|gb|ELP87934.1| proline synthetase associated protein, putative [Entamoeba invadens
IP1]
Length = 235
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 98/164 (59%), Gaps = 7/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G LQSNK LL PNL +E V + +IA LDK + K + V +QVN+
Sbjct: 76 DIHWHFIGRLQSNKVH-LLVSTPNLVCIETVHSLEIAQKLDKELKK-AEKTIDVFIQVNS 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEE K G+D L + E + NL G+MTIGM T NF T+ N A++ +
Sbjct: 134 SGEEQKGGVDVKDALTVYEEAT-KLTNLRVKGIMTIGMVGEAKT--NFNTMKNLAAQIKE 190
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
L + ++ E+SMGMS D+ A ++G+T VR+GS +FGPR Y K
Sbjct: 191 KLKL--EKVEVSMGMSADYMLAAQLGATYVRVGSALFGPRNYNK 232
>gi|242211403|ref|XP_002471540.1| predicted protein [Postia placenta Mad-698-R]
gi|220729399|gb|EED83274.1| predicted protein [Postia placenta Mad-698-R]
Length = 259
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 118/214 (55%), Gaps = 27/214 (12%)
Query: 2 MLVTVALVKITYKKSLIKLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVE 60
+L L +I + ++ ++ L +DK LP DI+WHF+G LQSNKAK +L +PNL V+
Sbjct: 45 VLACFELGQIDFGENYVQEL--VDKAEQLPTDIRWHFIGTLQSNKAK-ILASIPNLYAVQ 101
Query: 61 GVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDP-------SSCLGIVEHVR 113
V + K A L+KA+ PL VLVQVNTSGE++KSG+ P + + H+
Sbjct: 102 TVTSTKAATALNKALPAERASPLNVLVQVNTSGEDNKSGLPPLPSDATEPDLVQLARHII 161
Query: 114 LRCPNLEFSGLMTIG--MPDYTSTP---ENFRTLLNCRAEVCKALGMAEDQCE------- 161
+ CP L GLMTIG +ST E+F L+ R + +AL A +
Sbjct: 162 VECPRLHLQGLMTIGSLTESLSSTEKPNEDFERLVRTRDLLQEALAQAGFLTDGGRWGEG 221
Query: 162 ----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
LSMGMS DFE A+ GS VR+G+ IFG R
Sbjct: 222 GKLLLSMGMSSDFEAALNSGSDIVRVGTGIFGTR 255
>gi|259483672|tpe|CBF79253.1| TPA: alanine racemase family protein, putative (AFU_orthologue;
AFUA_4G04300) [Aspergillus nidulans FGSC A4]
Length = 272
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 100/176 (56%), Gaps = 13/176 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-----GRKPL 83
LP IKWHF+G LQSNK +L L VE V +EK A LDK G + L
Sbjct: 88 LPPTIKWHFIGGLQSNKCVSLARDTRALWAVESVDSEKKATLLDKGWGERKAEMGGEEKL 147
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP------ 136
+V VQVNTSGEE+KSG+DP + + + +CP L GLMTIG +
Sbjct: 148 RVFVQVNTSGEENKSGVDPGEEVVRLCRFIMDKCPRLRLQGLMTIGAIARSKATTAETEN 207
Query: 137 ENFRTLLNCRAEVCKALGMAED-QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+F L R V +ALG+ D + ELSMGMS DFE AI +GS VR+G+TIFG R
Sbjct: 208 EDFICLKQARERVNEALGLEGDARLELSMGMSEDFEGAIALGSDEVRVGTTIFGDR 263
>gi|299749232|ref|XP_001838603.2| proline synthetase associated protein [Coprinopsis cinerea
okayama7#130]
gi|298408344|gb|EAU83204.2| proline synthetase associated protein [Coprinopsis cinerea
okayama7#130]
Length = 268
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 113/192 (58%), Gaps = 31/192 (16%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WHF+G LQSNKAKTL +PNL ++ +G+ K AN L+KA+S+ PL+VL+Q
Sbjct: 73 LPSDIRWHFIGTLQSNKAKTL-ALIPNLYSIQTLGSVKAANALNKALSSDRTTPLRVLLQ 131
Query: 89 VNTSGEESKSGIDP--------SSCLG-IVEHVRLRCPNLEFSGLMTIG---MPDYTSTP 136
VNTSGE++KSG+ P +S LG + HV CP L GLMTIG + + S
Sbjct: 132 VNTSGEDAKSGLPPLSSSEDVSASELGKLAAHVIRECPALRLEGLMTIGSLELSIHASET 191
Query: 137 E---NFRTLLNCRAEVCKAL---GMAEDQCE-----------LSMGMSGDFEQAIEMGST 179
E +F L R ++ KA ED + LSMGMS DFE A++ GS
Sbjct: 192 EKNADFERLKQTR-DILKAYLETTFGEDGTKQWGQEGTGKLLLSMGMSSDFETALKAGSD 250
Query: 180 SVRIGSTIFGPR 191
+R+GS+IFG R
Sbjct: 251 IIRVGSSIFGGR 262
>gi|393242034|gb|EJD49553.1| hypothetical protein AURDEDRAFT_112426 [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 110/192 (57%), Gaps = 23/192 (11%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK LP+DI+WHF+G LQSNK +TL +PNL + + + K A L+K +
Sbjct: 75 LVDKAPQLPDDIRWHFIGTLQSNKCRTL-ASIPNLYAIHTLTSAKAATALNKGLPETRAA 133
Query: 82 PLKVLVQVNTSGEESKSGIDPSSC---------LGIVEHVRLRCPNLEFSGLMTIGMPDY 132
PL VL+QVNTSGEESKSG+ P S + + HV CP L GLMTIG +
Sbjct: 134 PLNVLLQVNTSGEESKSGLAPLSSNSDGESGALVELARHVLRECPRLHLLGLMTIGSLEA 193
Query: 133 TSTP------ENFRTLLNCRAEVCKAL-----GMAED-QCELSMGMSGDFEQAIEMGSTS 180
+ ++F+TL+ R + ++L +D + LSMGMS DFE AI GS+
Sbjct: 194 SLAAADHDENQDFQTLIRTRDALEESLRGETGKWGQDGRLLLSMGMSSDFEAAIHAGSSI 253
Query: 181 VRIGSTIFGPRE 192
VR+G++IFG R+
Sbjct: 254 VRVGTSIFGSRK 265
>gi|395332513|gb|EJF64892.1| hypothetical protein DICSQDRAFT_178448 [Dichomitus squalens
LYAD-421 SS1]
Length = 280
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 29/192 (15%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DI+WHF+G LQSNKAK +L +PNL ++ + + K A L+KA+ PL VL+
Sbjct: 80 QLPQDIRWHFIGTLQSNKAK-ILASIPNLYAIQTLTSTKAATALNKALPEDRPSPLNVLL 138
Query: 88 QVNTSGEESKSGIDP------------SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST 135
QVNTSGE+ KSG+ P S + +H+ CP L GLMTIG + T
Sbjct: 139 QVNTSGEDQKSGVPPLTSNVAESEVDSSELFQLAKHILTECPRLRLQGLMTIGSLSESLT 198
Query: 136 P----ENFRTLLNCRAEVCKALGMA------------EDQCELSMGMSGDFEQAIEMGST 179
E+F L++ R + AL A +Q LSMGMS DFE A+ GS
Sbjct: 199 KEKENEDFARLVSTRDVLEGALARAGFPRESGQWGDEGNQLLLSMGMSSDFEAALAAGSN 258
Query: 180 SVRIGSTIFGPR 191
VR+G+ IFG R
Sbjct: 259 IVRVGTGIFGAR 270
>gi|336383194|gb|EGO24343.1| hypothetical protein SERLADRAFT_337532 [Serpula lacrymans var.
lacrymans S7.9]
Length = 231
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 26/190 (13%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP DI+WHF+G LQSNK+K +L +PN+ ++ V + + A L+KA+ PL VL+
Sbjct: 39 QLPVDIRWHFIGTLQSNKSK-ILASIPNIYAIQTVTSARAATALNKALPIERTSPLNVLL 97
Query: 88 QVNTSGEESKSGIDP--------SSCLGIVEHVRLRCPNLEFSGLMTIG-----MPDYTS 134
QVNTSGE+ KSG+ P S + + H+ CP L GLMTIG +
Sbjct: 98 QVNTSGEDVKSGLPPLVESSPSDSELVQLARHIITTCPRLRLQGLMTIGSLTESLASSEK 157
Query: 135 TPENFRTLLNCRAEVCKALGMAED------------QCELSMGMSGDFEQAIEMGSTSVR 182
E+F TL R E+ + L + E+ + LSMGMS DFE A++ GS VR
Sbjct: 158 ANEDFETLKGTRDELHRQLELDENLQKGGGEWGEDGKLLLSMGMSSDFESALKAGSDIVR 217
Query: 183 IGSTIFGPRE 192
+G++IFG R+
Sbjct: 218 VGTSIFGARQ 227
>gi|229519847|ref|ZP_04409281.1| hypothetical protein VIF_000361 [Vibrio cholerae TM 11079-80]
gi|229343135|gb|EEO08119.1| hypothetical protein VIF_000361 [Vibrio cholerae TM 11079-80]
Length = 236
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + I +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGIDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPMDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|419829037|ref|ZP_14352526.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-1A2]
gi|419831818|ref|ZP_14355285.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-61A2]
gi|419835408|ref|ZP_14358853.1| hypothetical protein VCHC46B1_0565 [Vibrio cholerae HC-46B1]
gi|421342022|ref|ZP_15792429.1| hypothetical protein VCHC43B1_0570 [Vibrio cholerae HC-43B1]
gi|422916202|ref|ZP_16950543.1| hypothetical protein VCHC02A1_0508 [Vibrio cholerae HC-02A1]
gi|423733769|ref|ZP_17706985.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-41B1]
gi|423816160|ref|ZP_17715146.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-55C2]
gi|423848224|ref|ZP_17718933.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-59A1]
gi|423878803|ref|ZP_17722541.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-60A1]
gi|423996623|ref|ZP_17739889.1| hypothetical protein VCHC02C1_0519 [Vibrio cholerae HC-02C1]
gi|424008055|ref|ZP_17751005.1| hypothetical protein VCHC44C1_0538 [Vibrio cholerae HC-44C1]
gi|424015320|ref|ZP_17755170.1| hypothetical protein VCHC55B2_0509 [Vibrio cholerae HC-55B2]
gi|424018434|ref|ZP_17758236.1| hypothetical protein VCHC59B1_0518 [Vibrio cholerae HC-59B1]
gi|424623806|ref|ZP_18062286.1| hypothetical protein VCHC50A1_0512 [Vibrio cholerae HC-50A1]
gi|424628381|ref|ZP_18066690.1| hypothetical protein VCHC51A1_0508 [Vibrio cholerae HC-51A1]
gi|424632337|ref|ZP_18070456.1| hypothetical protein VCHC52A1_0513 [Vibrio cholerae HC-52A1]
gi|424635424|ref|ZP_18073448.1| hypothetical protein VCHC55A1_0517 [Vibrio cholerae HC-55A1]
gi|424639215|ref|ZP_18077115.1| hypothetical protein VCHC56A1_0481 [Vibrio cholerae HC-56A1]
gi|424647498|ref|ZP_18085178.1| hypothetical protein VCHC57A1_0511 [Vibrio cholerae HC-57A1]
gi|443526354|ref|ZP_21092439.1| hypothetical protein VCHC78A1_00501 [Vibrio cholerae HC-78A1]
gi|341640722|gb|EGS65301.1| hypothetical protein VCHC02A1_0508 [Vibrio cholerae HC-02A1]
gi|395945525|gb|EJH56190.1| hypothetical protein VCHC43B1_0570 [Vibrio cholerae HC-43B1]
gi|408016254|gb|EKG53807.1| hypothetical protein VCHC50A1_0512 [Vibrio cholerae HC-50A1]
gi|408021369|gb|EKG58626.1| hypothetical protein VCHC52A1_0513 [Vibrio cholerae HC-52A1]
gi|408027594|gb|EKG64557.1| hypothetical protein VCHC56A1_0481 [Vibrio cholerae HC-56A1]
gi|408027672|gb|EKG64631.1| hypothetical protein VCHC55A1_0517 [Vibrio cholerae HC-55A1]
gi|408037293|gb|EKG73692.1| hypothetical protein VCHC57A1_0511 [Vibrio cholerae HC-57A1]
gi|408059203|gb|EKG93975.1| hypothetical protein VCHC51A1_0508 [Vibrio cholerae HC-51A1]
gi|408622226|gb|EKK95214.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-1A2]
gi|408631926|gb|EKL04442.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-41B1]
gi|408636831|gb|EKL08953.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-55C2]
gi|408644097|gb|EKL15803.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-60A1]
gi|408645209|gb|EKL16870.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-59A1]
gi|408652225|gb|EKL23450.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-61A2]
gi|408854528|gb|EKL94281.1| hypothetical protein VCHC02C1_0519 [Vibrio cholerae HC-02C1]
gi|408858821|gb|EKL98491.1| hypothetical protein VCHC46B1_0565 [Vibrio cholerae HC-46B1]
gi|408862079|gb|EKM01628.1| hypothetical protein VCHC55B2_0509 [Vibrio cholerae HC-55B2]
gi|408866342|gb|EKM05725.1| hypothetical protein VCHC44C1_0538 [Vibrio cholerae HC-44C1]
gi|408869980|gb|EKM09262.1| hypothetical protein VCHC59B1_0518 [Vibrio cholerae HC-59B1]
gi|443455347|gb|ELT19129.1| hypothetical protein VCHC78A1_00501 [Vibrio cholerae HC-78A1]
Length = 236
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFSQL----AELQQQLAQKHPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|163803737|ref|ZP_02197595.1| FkuA [Vibrio sp. AND4]
gi|159172456|gb|EDP57324.1| FkuA [Vibrio sp. AND4]
Length = 236
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ F Y P++ I+WHF+G +QSNK++ + + D V + KIA L+ N
Sbjct: 65 KVQHFAKHY--PDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPN 119
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTST 135
KPL+VL+QVNTSGEESKSG+ + + E + R PNL GLM+I +PDY S
Sbjct: 120 -ELKPLQVLIQVNTSGEESKSGVADAEIFELAELIS-RLPNLTLRGLMSIPANVPDYQSQ 177
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F+ L + ++ + D LSMGMSGD AIE GST VRIG+ IFG R+Y K
Sbjct: 178 LRAFKQLEKLKQKLAQQYS---DVDTLSMGMSGDMGAAIEAGSTMVRIGTAIFGARDYNK 234
Query: 196 KQ 197
+Q
Sbjct: 235 QQ 236
>gi|121590705|ref|ZP_01678037.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153819160|ref|ZP_01971827.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153826571|ref|ZP_01979238.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|227080671|ref|YP_002809222.1| hypothetical protein VCM66_0446 [Vibrio cholerae M66-2]
gi|229507099|ref|ZP_04396605.1| hypothetical protein VCF_002321 [Vibrio cholerae BX 330286]
gi|298501008|ref|ZP_07010809.1| YggS family pyridoxal phosphate enzyme [Vibrio cholerae MAK 757]
gi|121547436|gb|EAX57545.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|126510305|gb|EAZ72899.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|149739663|gb|EDM53877.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|227008559|gb|ACP04771.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229355844|gb|EEO20764.1| hypothetical protein VCF_002321 [Vibrio cholerae BX 330286]
gi|297540256|gb|EFH76316.1| YggS family pyridoxal phosphate enzyme [Vibrio cholerae MAK 757]
Length = 236
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFSQL----AELQQQLAQKHPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|332241070|ref|XP_003269712.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Nomascus leucogenys]
Length = 242
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 100/166 (60%), Gaps = 32/166 (19%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLVQVN 90
+IKWHF+GHLQ L+ VPNL M+E V + K+A+ ++ + G + LKV++Q+N
Sbjct: 88 EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKGSLERLKVMIQIN 146
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
TSGEESK G+ PS + IVEH+ +CPNLEF GLMTIG
Sbjct: 147 TSGEESKHGVPPSETIAIVEHINAKCPNLEFVGLMTIG---------------------- 184
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ G +LS G + DF+ IE+GST+VR+GS IFG R+Y+KK
Sbjct: 185 -SFGH-----DLSQGPNPDFQ--IEVGSTNVRVGSMIFGERDYSKK 222
>gi|262191072|ref|ZP_06049279.1| hypothetical protein VIH_001443 [Vibrio cholerae CT 5369-93]
gi|262033048|gb|EEY51579.1| hypothetical protein VIH_001443 [Vibrio cholerae CT 5369-93]
Length = 236
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYSQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|429886751|ref|ZP_19368295.1| Hypothetical protein YggS, proline synthase co-transcribed [Vibrio
cholerae PS15]
gi|429226356|gb|EKY32481.1| Hypothetical protein YggS, proline synthase co-transcribed [Vibrio
cholerae PS15]
Length = 236
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYSQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|67541707|ref|XP_664621.1| hypothetical protein AN7017.2 [Aspergillus nidulans FGSC A4]
gi|40742473|gb|EAA61663.1| hypothetical protein AN7017.2 [Aspergillus nidulans FGSC A4]
Length = 349
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 100/176 (56%), Gaps = 13/176 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-----GRKPL 83
LP IKWHF+G LQSNK +L L VE V +EK A LDK G + L
Sbjct: 165 LPPTIKWHFIGGLQSNKCVSLARDTRALWAVESVDSEKKATLLDKGWGERKAEMGGEEKL 224
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP------ 136
+V VQVNTSGEE+KSG+DP + + + +CP L GLMTIG +
Sbjct: 225 RVFVQVNTSGEENKSGVDPGEEVVRLCRFIMDKCPRLRLQGLMTIGAIARSKATTAETEN 284
Query: 137 ENFRTLLNCRAEVCKALGMAED-QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+F L R V +ALG+ D + ELSMGMS DFE AI +GS VR+G+TIFG R
Sbjct: 285 EDFICLKQARERVNEALGLEGDARLELSMGMSEDFEGAIALGSDEVRVGTTIFGDR 340
>gi|262172425|ref|ZP_06040103.1| hypothetical protein VII_003254 [Vibrio mimicus MB-451]
gi|261893501|gb|EEY39487.1| hypothetical protein VII_003254 [Vibrio mimicus MB-451]
Length = 236
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQRAAFTQL----AELQRQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|153828401|ref|ZP_01981068.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148876110|gb|EDL74245.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 236
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|171689970|ref|XP_001909924.1| hypothetical protein [Podospora anserina S mat+]
gi|170944947|emb|CAP71058.1| unnamed protein product [Podospora anserina S mat+]
Length = 268
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 105/181 (58%), Gaps = 21/181 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK-------AVSN---L 78
LP I+WHF+G LQS K L +PNL + + K A LDK A +N
Sbjct: 80 LPRTIQWHFIGGLQSKHTKNL-AKIPNLFCISSIDTLKKAELLDKYRGDQIAAATNPDIF 138
Query: 79 GRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT--ST 135
G+ +KV VQVNTSGEESKSG P + + + + CPNLE GLMTIG + +T
Sbjct: 139 GK--IKVHVQVNTSGEESKSGCAPGQETVKLCKKIENECPNLELLGLMTIGAIARSRETT 196
Query: 136 PEN----FRTLLNCRAEVCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
PEN F+ L R V K LG+ E++ ELSMGMS DFE AI MGS VR+GSTIFG
Sbjct: 197 PENENEDFQVLREQRDLVRKELGLGEERLLELSMGMSEDFEGAIAMGSDEVRVGSTIFGA 256
Query: 191 R 191
R
Sbjct: 257 R 257
>gi|15640488|ref|NP_230115.1| hypothetical protein VC0461 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|153802601|ref|ZP_01957187.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153823179|ref|ZP_01975846.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|229509065|ref|ZP_04398553.1| hypothetical protein VCE_000468 [Vibrio cholerae B33]
gi|229519733|ref|ZP_04409176.1| hypothetical protein VCC_003765 [Vibrio cholerae RC9]
gi|229606245|ref|YP_002876893.1| hypothetical protein VCD_001146 [Vibrio cholerae MJ-1236]
gi|254291172|ref|ZP_04961968.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254850692|ref|ZP_05240042.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744292|ref|ZP_05418245.1| hypothetical protein VCH_000603 [Vibrio cholera CIRS 101]
gi|262147283|ref|ZP_06028082.1| hypothetical protein VIG_000131 [Vibrio cholerae INDRE 91/1]
gi|360037102|ref|YP_004938865.1| hypothetical protein Vch1786_I2782 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740334|ref|YP_005332303.1| hypothetical protein O3Y_02140 [Vibrio cholerae IEC224]
gi|384423762|ref|YP_005633120.1| hypothetical protein VCLMA_A0419 [Vibrio cholerae LMA3984-4]
gi|417812446|ref|ZP_12459106.1| hypothetical protein VCHC49A2_1435 [Vibrio cholerae HC-49A2]
gi|417815308|ref|ZP_12461942.1| hypothetical protein VCHCUF01_0536 [Vibrio cholerae HCUF01]
gi|417823599|ref|ZP_12470191.1| hypothetical protein VCHE48_1518 [Vibrio cholerae HE48]
gi|418331169|ref|ZP_12942119.1| hypothetical protein VCHC06A1_0501 [Vibrio cholerae HC-06A1]
gi|418336326|ref|ZP_12945225.1| hypothetical protein VCHC23A1_0658 [Vibrio cholerae HC-23A1]
gi|418342706|ref|ZP_12949506.1| hypothetical protein VCHC28A1_0501 [Vibrio cholerae HC-28A1]
gi|418347870|ref|ZP_12952606.1| hypothetical protein VCHC43A1_0509 [Vibrio cholerae HC-43A1]
gi|418354307|ref|ZP_12957031.1| hypothetical protein VCHC61A1_1308 [Vibrio cholerae HC-61A1]
gi|419824932|ref|ZP_14348439.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
CP1033(6)]
gi|421315800|ref|ZP_15766372.1| hypothetical protein VCCP10325_0513 [Vibrio cholerae CP1032(5)]
gi|421319249|ref|ZP_15769808.1| hypothetical protein VCCP103811_0502 [Vibrio cholerae CP1038(11)]
gi|421323282|ref|ZP_15773811.1| hypothetical protein VCCP104114_0476 [Vibrio cholerae CP1041(14)]
gi|421327688|ref|ZP_15778204.1| hypothetical protein VCCP104215_1442 [Vibrio cholerae CP1042(15)]
gi|421330689|ref|ZP_15781171.1| hypothetical protein VCCP104619_0537 [Vibrio cholerae CP1046(19)]
gi|421334287|ref|ZP_15784757.1| hypothetical protein VCCP104821_0434 [Vibrio cholerae CP1048(21)]
gi|421338184|ref|ZP_15788623.1| hypothetical protein VCHC20A2_0519 [Vibrio cholerae HC-20A2]
gi|421345736|ref|ZP_15796121.1| hypothetical protein VCHC46A1_0530 [Vibrio cholerae HC-46A1]
gi|421350323|ref|ZP_15800689.1| hypothetical protein VCHE25_1534 [Vibrio cholerae HE-25]
gi|422890501|ref|ZP_16932926.1| hypothetical protein VCHC40A1_0480 [Vibrio cholerae HC-40A1]
gi|422901301|ref|ZP_16936679.1| hypothetical protein VCHC48A1_0484 [Vibrio cholerae HC-48A1]
gi|422905484|ref|ZP_16940342.1| hypothetical protein VCHC70A1_0501 [Vibrio cholerae HC-70A1]
gi|422912205|ref|ZP_16946735.1| hypothetical protein VCHFU02_0499 [Vibrio cholerae HFU-02]
gi|422921715|ref|ZP_16954925.1| hypothetical protein VCBJG01_0468 [Vibrio cholerae BJG-01]
gi|422924684|ref|ZP_16957722.1| hypothetical protein VCHC38A1_0504 [Vibrio cholerae HC-38A1]
gi|423143730|ref|ZP_17131348.1| hypothetical protein VCHC19A1_0499 [Vibrio cholerae HC-19A1]
gi|423148714|ref|ZP_17136075.1| hypothetical protein VCHC21A1_0506 [Vibrio cholerae HC-21A1]
gi|423152505|ref|ZP_17139707.1| hypothetical protein VCHC22A1_0488 [Vibrio cholerae HC-22A1]
gi|423155289|ref|ZP_17142428.1| hypothetical protein VCHC32A1_0502 [Vibrio cholerae HC-32A1]
gi|423159148|ref|ZP_17146122.1| hypothetical protein VCHC33A2_0488 [Vibrio cholerae HC-33A2]
gi|423163826|ref|ZP_17150622.1| hypothetical protein VCHC48B2_0479 [Vibrio cholerae HC-48B2]
gi|423729847|ref|ZP_17703168.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-17A1]
gi|423747073|ref|ZP_17711355.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-50A2]
gi|423891677|ref|ZP_17725369.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-62A1]
gi|423926454|ref|ZP_17729986.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-77A1]
gi|424001009|ref|ZP_17744102.1| hypothetical protein VCHC17A2_0507 [Vibrio cholerae HC-17A2]
gi|424005169|ref|ZP_17748157.1| hypothetical protein VCHC37A1_0633 [Vibrio cholerae HC-37A1]
gi|424022962|ref|ZP_17762629.1| hypothetical protein VCHC62B1_0500 [Vibrio cholerae HC-62B1]
gi|424025980|ref|ZP_17765600.1| hypothetical protein VCHC69A1_0499 [Vibrio cholerae HC-69A1]
gi|424585362|ref|ZP_18024958.1| hypothetical protein VCCP10303_0508 [Vibrio cholerae CP1030(3)]
gi|424593982|ref|ZP_18033325.1| hypothetical protein VCCP1040_0505 [Vibrio cholerae CP1040(13)]
gi|424597918|ref|ZP_18037120.1| hypothetical protein VCCP104417_0509 [Vibrio Cholerae CP1044(17)]
gi|424600682|ref|ZP_18039841.1| hypothetical protein VCCP1047_0497 [Vibrio cholerae CP1047(20)]
gi|424605599|ref|ZP_18044566.1| hypothetical protein VCCP1050_0512 [Vibrio cholerae CP1050(23)]
gi|424609314|ref|ZP_18048177.1| hypothetical protein VCHC39A1_0498 [Vibrio cholerae HC-39A1]
gi|424612234|ref|ZP_18051045.1| hypothetical protein VCHC41A1_0515 [Vibrio cholerae HC-41A1]
gi|424616111|ref|ZP_18054806.1| hypothetical protein VCHC42A1_0503 [Vibrio cholerae HC-42A1]
gi|424620874|ref|ZP_18059405.1| hypothetical protein VCHC47A1_0520 [Vibrio cholerae HC-47A1]
gi|424643691|ref|ZP_18081449.1| hypothetical protein VCHC56A2_0512 [Vibrio cholerae HC-56A2]
gi|424651613|ref|ZP_18089141.1| hypothetical protein VCHC57A2_0506 [Vibrio cholerae HC-57A2]
gi|424655561|ref|ZP_18092867.1| hypothetical protein VCHC81A2_0509 [Vibrio cholerae HC-81A2]
gi|440708667|ref|ZP_20889328.1| hypothetical protein VC4260B_00730 [Vibrio cholerae 4260B]
gi|443502511|ref|ZP_21069503.1| hypothetical protein VCHC64A1_00494 [Vibrio cholerae HC-64A1]
gi|443506419|ref|ZP_21073216.1| hypothetical protein VCHC65A1_00498 [Vibrio cholerae HC-65A1]
gi|443510253|ref|ZP_21076925.1| hypothetical protein VCHC67A1_00497 [Vibrio cholerae HC-67A1]
gi|443514090|ref|ZP_21080634.1| hypothetical protein VCHC68A1_00493 [Vibrio cholerae HC-68A1]
gi|443517903|ref|ZP_21084325.1| hypothetical protein VCHC71A1_00493 [Vibrio cholerae HC-71A1]
gi|443522485|ref|ZP_21088735.1| hypothetical protein VCHC72A2_00496 [Vibrio cholerae HC-72A2]
gi|443530389|ref|ZP_21096405.1| hypothetical protein VCHC7A1_01507 [Vibrio cholerae HC-7A1]
gi|443534161|ref|ZP_21100080.1| hypothetical protein VCHC80A1_00466 [Vibrio cholerae HC-80A1]
gi|443537743|ref|ZP_21103600.1| hypothetical protein VCHC81A1_01287 [Vibrio cholerae HC-81A1]
gi|449054309|ref|ZP_21732977.1| Hypothetical protein YggS [Vibrio cholerae O1 str. Inaba G4222]
gi|12230811|sp|Q9KUQ4.1|Y461_VIBCH RecName: Full=UPF0001 protein VC_0461
gi|9654886|gb|AAF93634.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|124121864|gb|EAY40607.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|126519305|gb|EAZ76528.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|150422866|gb|EDN14817.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229344422|gb|EEO09397.1| hypothetical protein VCC_003765 [Vibrio cholerae RC9]
gi|229353990|gb|EEO18924.1| hypothetical protein VCE_000468 [Vibrio cholerae B33]
gi|229368900|gb|ACQ59323.1| hypothetical protein VCD_001146 [Vibrio cholerae MJ-1236]
gi|254846397|gb|EET24811.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255738232|gb|EET93624.1| hypothetical protein VCH_000603 [Vibrio cholera CIRS 101]
gi|262031277|gb|EEY49892.1| hypothetical protein VIG_000131 [Vibrio cholerae INDRE 91/1]
gi|327483315|gb|AEA77722.1| Hypothetical protein YggS, proline synthase co- transcribed
bacterial-like protein PROSC [Vibrio cholerae LMA3984-4]
gi|340043294|gb|EGR04253.1| hypothetical protein VCHCUF01_0536 [Vibrio cholerae HCUF01]
gi|340043826|gb|EGR04783.1| hypothetical protein VCHC49A2_1435 [Vibrio cholerae HC-49A2]
gi|340048228|gb|EGR09150.1| hypothetical protein VCHE48_1518 [Vibrio cholerae HE48]
gi|341625816|gb|EGS51243.1| hypothetical protein VCHC70A1_0501 [Vibrio cholerae HC-70A1]
gi|341627189|gb|EGS52515.1| hypothetical protein VCHC48A1_0484 [Vibrio cholerae HC-48A1]
gi|341627514|gb|EGS52817.1| hypothetical protein VCHC40A1_0480 [Vibrio cholerae HC-40A1]
gi|341641141|gb|EGS65700.1| hypothetical protein VCHFU02_0499 [Vibrio cholerae HFU-02]
gi|341648218|gb|EGS72283.1| hypothetical protein VCBJG01_0468 [Vibrio cholerae BJG-01]
gi|341648637|gb|EGS72681.1| hypothetical protein VCHC38A1_0504 [Vibrio cholerae HC-38A1]
gi|356421659|gb|EHH75153.1| hypothetical protein VCHC06A1_0501 [Vibrio cholerae HC-06A1]
gi|356422013|gb|EHH75500.1| hypothetical protein VCHC21A1_0506 [Vibrio cholerae HC-21A1]
gi|356426929|gb|EHH80212.1| hypothetical protein VCHC19A1_0499 [Vibrio cholerae HC-19A1]
gi|356433107|gb|EHH86300.1| hypothetical protein VCHC23A1_0658 [Vibrio cholerae HC-23A1]
gi|356434761|gb|EHH87931.1| hypothetical protein VCHC22A1_0488 [Vibrio cholerae HC-22A1]
gi|356438064|gb|EHH91120.1| hypothetical protein VCHC28A1_0501 [Vibrio cholerae HC-28A1]
gi|356443247|gb|EHH96070.1| hypothetical protein VCHC32A1_0502 [Vibrio cholerae HC-32A1]
gi|356447981|gb|EHI00766.1| hypothetical protein VCHC43A1_0509 [Vibrio cholerae HC-43A1]
gi|356450407|gb|EHI03129.1| hypothetical protein VCHC33A2_0488 [Vibrio cholerae HC-33A2]
gi|356454083|gb|EHI06738.1| hypothetical protein VCHC61A1_1308 [Vibrio cholerae HC-61A1]
gi|356456473|gb|EHI09072.1| hypothetical protein VCHC48B2_0479 [Vibrio cholerae HC-48B2]
gi|356648256|gb|AET28311.1| hypothetical protein Vch1786_I2782 [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793844|gb|AFC57315.1| hypothetical protein O3Y_02140 [Vibrio cholerae IEC224]
gi|395922541|gb|EJH33357.1| hypothetical protein VCCP10325_0513 [Vibrio cholerae CP1032(5)]
gi|395923127|gb|EJH33939.1| hypothetical protein VCCP104114_0476 [Vibrio cholerae CP1041(14)]
gi|395925574|gb|EJH36371.1| hypothetical protein VCCP103811_0502 [Vibrio cholerae CP1038(11)]
gi|395931422|gb|EJH42167.1| hypothetical protein VCCP104215_1442 [Vibrio cholerae CP1042(15)]
gi|395934542|gb|EJH45280.1| hypothetical protein VCCP104619_0537 [Vibrio cholerae CP1046(19)]
gi|395937817|gb|EJH48528.1| hypothetical protein VCCP104821_0434 [Vibrio cholerae CP1048(21)]
gi|395946547|gb|EJH57210.1| hypothetical protein VCHC20A2_0519 [Vibrio cholerae HC-20A2]
gi|395948405|gb|EJH59055.1| hypothetical protein VCHC46A1_0530 [Vibrio cholerae HC-46A1]
gi|395954445|gb|EJH65055.1| hypothetical protein VCHE25_1534 [Vibrio cholerae HE-25]
gi|395964021|gb|EJH74264.1| hypothetical protein VCHC57A2_0506 [Vibrio cholerae HC-57A2]
gi|395964108|gb|EJH74350.1| hypothetical protein VCHC56A2_0512 [Vibrio cholerae HC-56A2]
gi|395967076|gb|EJH77179.1| hypothetical protein VCHC42A1_0503 [Vibrio cholerae HC-42A1]
gi|395975690|gb|EJH85171.1| hypothetical protein VCHC47A1_0520 [Vibrio cholerae HC-47A1]
gi|395977762|gb|EJH87161.1| hypothetical protein VCCP10303_0508 [Vibrio cholerae CP1030(3)]
gi|395979274|gb|EJH88633.1| hypothetical protein VCCP1047_0497 [Vibrio cholerae CP1047(20)]
gi|408010210|gb|EKG48082.1| hypothetical protein VCHC39A1_0498 [Vibrio cholerae HC-39A1]
gi|408016970|gb|EKG54494.1| hypothetical protein VCHC41A1_0515 [Vibrio cholerae HC-41A1]
gi|408037624|gb|EKG74012.1| hypothetical protein VCCP1040_0505 [Vibrio cholerae CP1040(13)]
gi|408044975|gb|EKG80851.1| hypothetical protein VCCP104417_0509 [Vibrio Cholerae CP1044(17)]
gi|408046808|gb|EKG82473.1| hypothetical protein VCCP1050_0512 [Vibrio cholerae CP1050(23)]
gi|408057533|gb|EKG92378.1| hypothetical protein VCHC81A2_0509 [Vibrio cholerae HC-81A2]
gi|408611956|gb|EKK85312.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
CP1033(6)]
gi|408627746|gb|EKL00549.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-17A1]
gi|408642291|gb|EKL14041.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-50A2]
gi|408658786|gb|EKL29846.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-77A1]
gi|408660105|gb|EKL31135.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-62A1]
gi|408849213|gb|EKL89241.1| hypothetical protein VCHC37A1_0633 [Vibrio cholerae HC-37A1]
gi|408849745|gb|EKL89754.1| hypothetical protein VCHC17A2_0507 [Vibrio cholerae HC-17A2]
gi|408874527|gb|EKM13697.1| hypothetical protein VCHC62B1_0500 [Vibrio cholerae HC-62B1]
gi|408881453|gb|EKM20338.1| hypothetical protein VCHC69A1_0499 [Vibrio cholerae HC-69A1]
gi|439975763|gb|ELP51870.1| hypothetical protein VC4260B_00730 [Vibrio cholerae 4260B]
gi|443433123|gb|ELS75641.1| hypothetical protein VCHC64A1_00494 [Vibrio cholerae HC-64A1]
gi|443436954|gb|ELS83064.1| hypothetical protein VCHC65A1_00498 [Vibrio cholerae HC-65A1]
gi|443440827|gb|ELS90508.1| hypothetical protein VCHC67A1_00497 [Vibrio cholerae HC-67A1]
gi|443444598|gb|ELS97867.1| hypothetical protein VCHC68A1_00493 [Vibrio cholerae HC-68A1]
gi|443448436|gb|ELT05066.1| hypothetical protein VCHC71A1_00493 [Vibrio cholerae HC-71A1]
gi|443451554|gb|ELT11808.1| hypothetical protein VCHC72A2_00496 [Vibrio cholerae HC-72A2]
gi|443458590|gb|ELT25985.1| hypothetical protein VCHC7A1_01507 [Vibrio cholerae HC-7A1]
gi|443462662|gb|ELT33694.1| hypothetical protein VCHC80A1_00466 [Vibrio cholerae HC-80A1]
gi|443466568|gb|ELT41225.1| hypothetical protein VCHC81A1_01287 [Vibrio cholerae HC-81A1]
gi|448266102|gb|EMB03332.1| Hypothetical protein YggS [Vibrio cholerae O1 str. Inaba G4222]
Length = 236
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|121728581|ref|ZP_01681602.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673920|ref|YP_001215987.1| hypothetical protein VC0395_A0013 [Vibrio cholerae O395]
gi|153216285|ref|ZP_01950378.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|227116864|ref|YP_002818760.1| hypothetical protein VC395_0505 [Vibrio cholerae O395]
gi|262167145|ref|ZP_06034859.1| hypothetical protein VIJ_000305 [Vibrio cholerae RC27]
gi|297580600|ref|ZP_06942526.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|121629137|gb|EAX61580.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124114374|gb|EAY33194.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|146315803|gb|ABQ20342.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227012314|gb|ACP08524.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262024445|gb|EEY43132.1| hypothetical protein VIJ_000305 [Vibrio cholerae RC27]
gi|297535016|gb|EFH73851.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 236
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFSQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|229512523|ref|ZP_04401994.1| hypothetical protein VCB_000163 [Vibrio cholerae TMA 21]
gi|229530303|ref|ZP_04419691.1| protein of unknown function [Vibrio cholerae 12129(1)]
gi|229332076|gb|EEN97564.1| protein of unknown function [Vibrio cholerae 12129(1)]
gi|229350416|gb|EEO15365.1| hypothetical protein VCB_000163 [Vibrio cholerae TMA 21]
Length = 236
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|378725803|gb|EHY52262.1| YggS family pyridoxal phosphate enzyme [Exophiala dermatitidis
NIH/UT8656]
Length = 322
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 108/207 (52%), Gaps = 40/207 (19%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK-----------AVSN 77
LP+ IKWHF+G LQSNKA+ L V L VE V + K A+ LDK S+
Sbjct: 111 LPKTIKWHFIGGLQSNKARELAREVEGLWAVESVDSVKKASLLDKGRAERSEGDKTTSSS 170
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDP----------SSCLGIVEHVRLRCPNLEFSGLMTI 127
PL+V +QVNTSGEESKSG+ P + + +H+ L+CP+L GLMTI
Sbjct: 171 ADSDPLRVFIQVNTSGEESKSGVAPLITDDNDGKEPEVVTLAKHIILQCPHLRLQGLMTI 230
Query: 128 GMPDYTSTP------ENFRTLLNCRAEVCKALGMAED-------------QCELSMGMSG 168
G + E+F L + R + + L E+ + ELSMGMS
Sbjct: 231 GAIARSKATTAETENEDFLCLRDTRDRLVQILRKDEELEGKFDLDGPDGFKLELSMGMSE 290
Query: 169 DFEQAIEMGSTSVRIGSTIFGPREYAK 195
DFE A+++GS VR+GSTIFG R K
Sbjct: 291 DFEGAVKLGSDEVRVGSTIFGERPMKK 317
>gi|261210038|ref|ZP_05924336.1| hypothetical protein VCJ_000280 [Vibrio sp. RC341]
gi|260840803|gb|EEX67345.1| hypothetical protein VCJ_000280 [Vibrio sp. RC341]
Length = 236
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 15/181 (8%)
Query: 19 KLLRFIDKYNLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ F ++Y P+ ++WHF+G LQSNK + + + D V + EKIA L++
Sbjct: 65 KIRYFAEQY--PQLALEWHFIGPLQSNKTRLM---AEHFDWVHTIEREKIAVRLNEQ-RP 118
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTST 135
+PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +PDY +
Sbjct: 119 ADMQPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVPDYPAQ 177
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 178 LAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFGERDYS 233
Query: 195 K 195
+
Sbjct: 234 R 234
>gi|424658359|ref|ZP_18095616.1| hypothetical protein VCHE16_0512 [Vibrio cholerae HE-16]
gi|408055249|gb|EKG90187.1| hypothetical protein VCHE16_0512 [Vibrio cholerae HE-16]
Length = 236
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQMDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|229525152|ref|ZP_04414557.1| hypothetical protein VCA_002763 [Vibrio cholerae bv. albensis
VL426]
gi|229338733|gb|EEO03750.1| hypothetical protein VCA_002763 [Vibrio cholerae bv. albensis
VL426]
Length = 236
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|422908998|ref|ZP_16943650.1| hypothetical protein VCHE09_0476 [Vibrio cholerae HE-09]
gi|341636080|gb|EGS60783.1| hypothetical protein VCHE09_0476 [Vibrio cholerae HE-09]
Length = 236
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQMDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|403376924|gb|EJY88451.1| hypothetical protein OXYTRI_16486 [Oxytricha trifallax]
Length = 280
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 101/171 (59%), Gaps = 8/171 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGG---VPNLDMVEGVGNEKIANHLDKAVSNLGRKP-LKVL 86
+DI+WHF+GHLQSNKAK L+ G +PN ++E + +EK+A ++K + RK + VL
Sbjct: 114 DDIQWHFIGHLQSNKAKKLVDGTAHIPNF-IIETIDSEKLATKINKECEKIQRKEKIGVL 172
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
VQV TS E +K G + +VE + +CP L F GLMT+G E F+ + R
Sbjct: 173 VQVLTSDEGTKHGAEQDKVGELVEFIYKKCPFLRFRGLMTMGR---LHDVEGFKAMQGLR 229
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
++ + LSMG S DFE+AI G+ R+GS IFG R+Y+KKQ
Sbjct: 230 EQLVHHYEIDPQSFILSMGTSMDFEEAIYEGANEARVGSDIFGARDYSKKQ 280
>gi|358058752|dbj|GAA95715.1| hypothetical protein E5Q_02372 [Mixia osmundae IAM 14324]
Length = 314
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 115/197 (58%), Gaps = 22/197 (11%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS-NLGR 80
+DK + LP I+W F+G LQSNK K +L +PNL VE + + K A+ ++A+S
Sbjct: 115 LVDKASILPASIRWRFIGSLQSNKCK-VLAAIPNLAAVETLDSVKKADLFERALSGESDD 173
Query: 81 KPLKVLVQVNTSGEESKSGID---PSSCLGIVEHVRLR----CPNLEFSGLMTIGMPDYT 133
+ L V +QVNTSGEESKSG+ + G + H+ L CP+LE GLMTIG D +
Sbjct: 174 RKLAVYLQVNTSGEESKSGLPILADRNADGELAHLALHVLDHCPHLELQGLMTIGAYDNS 233
Query: 134 S----TPEN--FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
+ +PEN FR+L CR + + LG ELSMGMS DF AI GS ++R+GS +
Sbjct: 234 NAPPGSPENADFRSLRECRDALKEKLGDRLPSLELSMGMSSDFADAIRSGSDNIRVGSKL 293
Query: 188 FGPR------EYAKKQQ 198
G R + A++QQ
Sbjct: 294 MGSRPSKAEAKEAREQQ 310
>gi|424589737|ref|ZP_18029184.1| hypothetical protein VCCP103710_0506 [Vibrio cholerae CP1037(10)]
gi|408036527|gb|EKG72953.1| hypothetical protein VCCP103710_0506 [Vibrio cholerae CP1037(10)]
Length = 236
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKVRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|254226314|ref|ZP_04919905.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125621176|gb|EAZ49519.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 236
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 107/186 (57%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y +
Sbjct: 229 ERDYGR 234
>gi|255535460|ref|YP_003095831.1| hypothetical protein FIC_01321 [Flavobacteriaceae bacterium
3519-10]
gi|255341656|gb|ACU07769.1| FIG018583: protein of unknown function [Flavobacteriaceae bacterium
3519-10]
Length = 234
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 103/177 (58%), Gaps = 8/177 (4%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ I KY LP+DIKWH +GHLQ+NK K + P +D V+ V +EKI N +DK +
Sbjct: 62 KVQELIAKYPQLPKDIKWHIIGHLQTNKVKYI---APFVDTVQSVDSEKILNEIDKQAAK 118
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVE-HVRLRCPNLEFSGLMTIGMPDYTSTP 136
RK + VL+QV + E++K G+D + + ++ + ++E +GLM GM +T
Sbjct: 119 CERK-INVLLQVKIAEEDTKYGLDAEQARTLYQNYLDGKYAHVEITGLM--GMATFTDDQ 175
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E R + L A LSMGMSGD+E AIE G+TSVR+GS IFG R+Y
Sbjct: 176 EQIRAEFRKLKTLFDELSGARKLTTLSMGMSGDYELAIECGATSVRVGSAIFGHRQY 232
>gi|402084550|gb|EJT79568.1| YggS family pyridoxal phosphate enzyme [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 277
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 103/191 (53%), Gaps = 29/191 (15%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---------- 78
LP ++WHF+G LQS KT+ VPNL V V + K A LD+A +L
Sbjct: 78 LPRSVRWHFIGGLQSTHCKTI-AKVPNLWCVSSVDSLKKAQLLDRARGDLIATAAAAAAA 136
Query: 79 ---------GRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIG 128
+PL V VQVNTSGE+SKSG P + + V C NL GLMTIG
Sbjct: 137 SSSGEQESPPPQPLNVHVQVNTSGEDSKSGCAPGAETTALCRAVARDCKNLRLLGLMTIG 196
Query: 129 M---PDYTSTPE----NFRTLLNCRAEVCKALGMA-EDQCELSMGMSGDFEQAIEMGSTS 180
T TPE +F L+ RA V LG+A E++ ELSMGMS DFE AI MGS
Sbjct: 197 AIARSRVTYTPETENEDFSALVGQRALVAAELGLASEEELELSMGMSDDFEGAIAMGSGE 256
Query: 181 VRIGSTIFGPR 191
VR+GSTIFG R
Sbjct: 257 VRVGSTIFGER 267
>gi|417819346|ref|ZP_12465963.1| hypothetical protein VCHE39_0821 [Vibrio cholerae HE39]
gi|423946500|ref|ZP_17733408.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-40]
gi|423975659|ref|ZP_17736957.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-46]
gi|340041202|gb|EGR02169.1| hypothetical protein VCHE39_0821 [Vibrio cholerae HE39]
gi|408662112|gb|EKL33084.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-40]
gi|408666196|gb|EKL36993.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-46]
Length = 236
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVDMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
DY + F L + ++ + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQLAELQQQLVQKFPQIDT---LSMGMSGDMQAAIEAGSTIVRIGTAIFGE 229
Query: 191 REYAK 195
R+Y++
Sbjct: 230 RDYSR 234
>gi|119583767|gb|EAW63363.1| proline synthetase co-transcribed homolog (bacterial), isoform
CRA_d [Homo sapiens]
Length = 265
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 89/168 (52%), Gaps = 48/168 (28%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+IKWHF+GHLQ L+G
Sbjct: 123 EIKWHFIGHLQKQNVNKLMG---------------------------------------- 142
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE-NFRTLLNCRAE 148
K G+ PS + IVEH+ +CPNLEF GLMTIG D + P +F+ LL+ R E
Sbjct: 143 -----KHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREE 197
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+CK L + DQ ELSMGMS DF+ A+E+GST+VRIGSTIFG R+Y+KK
Sbjct: 198 LCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 245
>gi|295662246|ref|XP_002791677.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279803|gb|EEH35369.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 303
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 106/199 (53%), Gaps = 32/199 (16%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-------VSNLGRK 81
LP I+WHF+G LQSNK TL V L VE V EK A+ LD+ V+ G K
Sbjct: 103 LPCGIRWHFIGGLQSNKCVTLARDVRGLWAVESVDTEKKASLLDRGWGERDVDVNEEGGK 162
Query: 82 P---------LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
L+V VQVNTSGEESKSG+ P+ + + +R +CP L+ GLMTIG
Sbjct: 163 KGQSINAGDRLRVFVQVNTSGEESKSGVKPAEAVSLCRFIREKCPRLKLQGLMTIGAIAR 222
Query: 133 TSTP------ENFRTLLNCRAEVCKALGMAED-------QCELSMGMSGDFEQAIEMGST 179
+ E+F L R V K L + D ELSMGMS DFE AI MGS
Sbjct: 223 SKATTVENENEDFVCLRETRDMVEKELELVADEGEGGAEGLELSMGMSEDFEGAIAMGSN 282
Query: 180 SVRIGSTIFG---PREYAK 195
VRIGSTIFG P+E A+
Sbjct: 283 QVRIGSTIFGARPPKEQAR 301
>gi|342321407|gb|EGU13341.1| Cytoplasmic protein [Rhodotorula glutinis ATCC 204091]
Length = 302
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 107/195 (54%), Gaps = 33/195 (16%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR---KPLKV 85
LP DI WHF+G LQSNK K +L +PNL +E + + K ANHL A+S+L +PL V
Sbjct: 105 LPNDIAWHFIGTLQSNKCK-MLAAIPNLFAIETLTSVKAANHLHNALSSLPSTRSEPLNV 163
Query: 86 LVQVNTSGEESKSGIDP-------SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT--STP 136
+Q+NTSGEE KSG+ + + H+ +CP L GLMTIG D + +TP
Sbjct: 164 FIQINTSGEEQKSGLAALTSSSSSGEAVDLALHILDKCPTLRLKGLMTIGSLDASKSATP 223
Query: 137 E-NFRTLLNCR---AEVCKALGMAEDQCE----------------LSMGMSGDFEQAIEM 176
+F L R EV ++ ++ E LSMGMS DF +AIE
Sbjct: 224 NPDFERLKETRDRLGEVLRSKAQSDGASEGLRKGVEQIERDGGLELSMGMSSDFVEAIEQ 283
Query: 177 GSTSVRIGSTIFGPR 191
GST+VR+GS+I G R
Sbjct: 284 GSTNVRVGSSIMGSR 298
>gi|392564444|gb|EIW57622.1| hypothetical protein TRAVEDRAFT_48654 [Trametes versicolor
FP-101664 SS1]
Length = 281
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 107/198 (54%), Gaps = 30/198 (15%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK LP+DI+WHF+G LQSNKAK +L +PNL ++ V + K A+ L+KA+
Sbjct: 76 LVDKAAQLPQDIRWHFIGTLQSNKAK-ILATIPNLYAIQTVTSIKAASALNKALPADRVA 134
Query: 82 PLKVLVQVNTSGEESKSGIDPSSC------------LGIVEHVRLRCPNLEFSGLMTIG- 128
PL +L+QVNTSGE++KSG+ P S + + V CP L GLMTIG
Sbjct: 135 PLNILLQVNTSGEDAKSGVPPLSAAMPEAEVDAAELVQVARFVVAECPRLRLQGLMTIGA 194
Query: 129 ----MPDYTSTPENFRTLLNCRAEVCKALGMAEDQCE-----------LSMGMSGDFEQA 173
+ E+F L+ R + AL A + E LSMGMS DFE A
Sbjct: 195 LAESLAAGAKENEDFARLVGTRDVLQAALARAGFRPEEGRWGEDGRLLLSMGMSSDFEAA 254
Query: 174 IEMGSTSVRIGSTIFGPR 191
++ GS VR+G+ IFG R
Sbjct: 255 LQAGSDIVRVGTGIFGSR 272
>gi|268531132|ref|XP_002630692.1| Hypothetical protein CBG02374 [Caenorhabditis briggsae]
Length = 550
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 93/163 (57%), Gaps = 4/163 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG--RKPLKVLVQV 89
+I+WHF+G +QSNK + + VE V +EK A DK S G PL+VLVQV
Sbjct: 76 EIRWHFIGQVQSNKISKICNSS-GIWCVETVESEKHARLFDKEWSKHGASSSPLRVLVQV 134
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
NTS EE+K GI S + E +R C NL+F G MTIG P +F L R
Sbjct: 135 NTSEEENKGGIKISEAPKLAEFIRKECLNLKFDGFMTIGSHASGVNP-DFEKLYTVRQAW 193
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ G + ELSMGMS DF QAI+ GSTSVR+GS +FG RE
Sbjct: 194 SEITGETPESVELSMGMSDDFLQAIQQGSTSVRVGSKLFGARE 236
>gi|342879873|gb|EGU81106.1| hypothetical protein FOXB_08380 [Fusarium oxysporum Fo5176]
Length = 263
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 102/175 (58%), Gaps = 13/175 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP----L 83
LP+ I+WHF+G LQS+ K+L G +PNL V + K A L+ A +NL +P +
Sbjct: 80 LPKTIQWHFIGGLQSSHCKSL-GKIPNLFCVSSIDTSKKAQLLNTARTNLLSSQPDLDKI 138
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP------ 136
V VQVNTSGEE+KSG P + + V CP+L F GLMTIG +
Sbjct: 139 GVHVQVNTSGEEAKSGCAPGEETVALCREVIETCPSLRFLGLMTIGAIARSKATTAETEN 198
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+F TL V K L + +D ELSMGMS DFE AI +GS+ VR+GSTIFG R
Sbjct: 199 EDFVTLKEQLDLVAKDLNLDKDSLELSMGMSEDFEGAIRLGSSEVRVGSTIFGQR 253
>gi|167381023|ref|XP_001735540.1| proline synthetase associated protein [Entamoeba dispar SAW760]
gi|165902419|gb|EDR28257.1| proline synthetase associated protein, putative [Entamoeba dispar
SAW760]
Length = 228
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+G LQSNK K LL P+L ++ + + +IA L+KA N K + V+VQ+N+
Sbjct: 71 NIEWHFIGRLQSNKLK-LLISTPHLKCIQTIHSLEIAEKLNKACIN-ANKVIDVMVQINS 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEE K G+ L +V+ V ++ NL F G+MTIGM + +NF T+ +C
Sbjct: 129 SGEEQKGGVSVEEALNVVKEV-MKYSNLHFIGIMTIGMVG--DSKKNFTTMKQLADIICS 185
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ + E+SMGMS D+E AIE+G+T VR+G+ +FG R+Y+K
Sbjct: 186 QEHL--ESIEISMGMSSDYELAIELGATMVRVGTALFGARDYSK 227
>gi|401399845|ref|XP_003880649.1| hypothetical protein NCLIV_010840 [Neospora caninum Liverpool]
gi|325115060|emb|CBZ50616.1| hypothetical protein NCLIV_010840 [Neospora caninum Liverpool]
Length = 326
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 116/228 (50%), Gaps = 60/228 (26%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRK---PLKVLV 87
D++WH +GHLQSNK K LL P L VE V ++K+A L D A + L ++ PL+VLV
Sbjct: 99 DLEWHMIGHLQSNKVKQLLTACPRLYAVETVDSKKLAKTLNDAAAAVLPQRNGAPLRVLV 158
Query: 88 QVNTSGEESKSGI------DP----------SSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
QVN S EESKSG+ +P S+ +VE++ CP+L FSGLMTIG PD
Sbjct: 159 QVNASDEESKSGVRLHANDNPDEKTAGTSGDSAVRELVEYIIDSCPHLRFSGLMTIGDPD 218
Query: 132 YTSTPENFRTL-----------------------LNCRAEVCKALGM------------- 155
TP F L ++ RAE +A+
Sbjct: 219 PERTPGTFAKLAKLRLDLLELPRVRQVFAPRAENVHGRAEGKRAVQAEPPEGNEHCGDSD 278
Query: 156 ----AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
+++ ELSMGMSGD +AI+ GST VRIG+ IFG R K ++
Sbjct: 279 AERDTDERFELSMGMSGDMAEAIKHGSTEVRIGTAIFGSRPAQPKSRS 326
>gi|294102393|ref|YP_003554251.1| alanine racemase domain-containing protein [Aminobacterium
colombiense DSM 12261]
gi|293617373|gb|ADE57527.1| alanine racemase domain protein [Aminobacterium colombiense DSM
12261]
Length = 234
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 102/170 (60%), Gaps = 10/170 (5%)
Query: 28 NLPEDIK--WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
+ PE+++ WH VGHLQ NKA+ L ++ + +E +A L++ + R ++V
Sbjct: 71 SWPEEVQAQWHLVGHLQRNKARKAL---EIFHTIQSLESESLAERLERICVEMNR-TVQV 126
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLL 143
L++VNTSGE SK G+ P +++ V +CP+L +G MT+G D E F L
Sbjct: 127 LLEVNTSGETSKHGVAPKDVQALLDFVIEKCPSLHVAGFMTVGPLTDDENRVREAFALLR 186
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
N R ++ + G++ ELSMGMSGDF+ AIE GST VRIG+ IFGPR Y
Sbjct: 187 NLRDDLSSSTGVS--LPELSMGMSGDFQWAIEEGSTMVRIGTAIFGPRSY 234
>gi|341039036|gb|EGS24028.1| alanine racemase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 263
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 98/179 (54%), Gaps = 21/179 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGRKP----L 83
LP I+WHF+G LQS + K L +PNL V + + A LDK + P +
Sbjct: 80 LPRSIQWHFIGGLQSGRCKEL-ARIPNLWCVSSIDSVNKAQLLDKHRGEQIKADPSIAKI 138
Query: 84 KVLVQVNTSGEESKSGIDPSS-----CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTP 136
V VQVNTSGEESKSG P C IV CPNL GLMTIG +TP
Sbjct: 139 NVHVQVNTSGEESKSGCAPGEEVVKVCKAIVNE----CPNLNLLGLMTIGAIARSVATTP 194
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
EN F L R V K LG+ ++ ELSMGMS DFE AI MGS+ VRIGSTIFG R
Sbjct: 195 ENENEDFALLKEQRDLVAKELGIESEKLELSMGMSEDFEGAIAMGSSEVRIGSTIFGER 253
>gi|126138400|ref|XP_001385723.1| hypothetical protein PICST_48387 [Scheffersomyces stipitis CBS
6054]
gi|126093001|gb|ABN67694.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 250
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 99/171 (57%), Gaps = 11/171 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G +QS KAK L GV +L VE + K LD S L P++V +Q
Sbjct: 79 LPKDIKWHFIGGMQSGKAKDLAKGVESLFAVETIDALKKCKQLDNTRSRLDGAPIEVYLQ 138
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL----RCPNLEFSGLMTIGMPDYTSTP----ENFR 140
+NTS E+ KSG S+ + E + C L+ GLMTIG + T E+F
Sbjct: 139 INTSEEDQKSGYSLSNLTELYETIDYILSDECKKLKLGGLMTIGSFAESHTDGEENEDFS 198
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L+N + V + + +LSMGMS DFEQAI+ GSTSVR+G++IFG R
Sbjct: 199 KLVNLKKIVDEKYKL---NLQLSMGMSSDFEQAIKQGSTSVRVGTSIFGAR 246
>gi|349805299|gb|AEQ18122.1| putative proline synthase co-transcribed bacterial [Hymenochirus
curtipes]
Length = 117
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 83/114 (72%), Gaps = 3/114 (2%)
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRT 141
KV+VQVNTS E+SK G+ P +G+V+H+ +CP+LEF GLMTIG Y T N F+
Sbjct: 1 KVMVQVNTSSEDSKHGLPPGETIGLVKHITEKCPSLEFVGLMTIGSFGYDITGPNPDFQR 60
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
LL R EVC+ L +A D ELSMGMS DFE AIE+GST++RIGSTIFG R Y+K
Sbjct: 61 LLAQREEVCE-LRLAVDTVELSMGMSSDFEHAIEVGSTNIRIGSTIFGERIYSK 113
>gi|154322825|ref|XP_001560727.1| hypothetical protein BC1G_00755 [Botryotinia fuckeliana B05.10]
gi|347837095|emb|CCD51667.1| similar to alanine racemase family protein [Botryotinia fuckeliana]
Length = 265
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD--------KAVSNLGR 80
LP IKWHF+G LQSNK K L V NL +V + ++K A+ L A SN
Sbjct: 74 LPRSIKWHFIGGLQSNKCKPLASTVFNLHLVSSIDSQKKASQLSLGRSLLPMPADSNSPP 133
Query: 81 KPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE-- 137
PL + +Q+NTSGE SKSG+ P + ++V CP L+ G MTIG + E
Sbjct: 134 SPLNIHIQLNTSGESSKSGVSPGKDTTELCKYVIEECPYLKLVGFMTIGAIARSQMKEGE 193
Query: 138 ---NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F+ L R V K LG+ + ELSMGMS DFE+AI GS VR+GSTIFG R
Sbjct: 194 ENEDFKVLREERDRVEKELGL--EGLELSMGMSEDFEEAIRQGSGEVRVGSTIFGQR 248
>gi|403411941|emb|CCL98641.1| predicted protein [Fibroporia radiculosa]
Length = 273
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 107/196 (54%), Gaps = 28/196 (14%)
Query: 23 FIDK-YNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK LP I+WHF+G LQSNKAK +L +PNL ++ V + K+A L+KA+
Sbjct: 72 LVDKAQQLPPSIRWHFIGTLQSNKAK-VLASIPNLYTIQTVTSVKVAAALNKAIPAERSS 130
Query: 82 PLKVLVQVNTSGEESKSGIDP----------SSCLGIVEHVRLRCPNLEFSGLMTIG--- 128
PL +L+QVNTSGE++KSG+ P S + H+ CP L GLMTIG
Sbjct: 131 PLNILLQVNTSGEDNKSGLPPLSVESESNVESELTQLARHIVSECPQLYLQGLMTIGSLT 190
Query: 129 --MPDYTSTPENFRTLLNCRAEVCKAL---GMAED--------QCELSMGMSGDFEQAIE 175
+ E+F L R + +AL G+ D + LSMGMS DFE A++
Sbjct: 191 ESLASTEKPNEDFERLCLTRDLLQQALVQAGLPPDGGKWGTDGKLLLSMGMSSDFEAALK 250
Query: 176 MGSTSVRIGSTIFGPR 191
GS VR+G++IFG R
Sbjct: 251 AGSDVVRVGTSIFGSR 266
>gi|262403913|ref|ZP_06080470.1| hypothetical protein VOA_001901 [Vibrio sp. RC586]
gi|262349875|gb|EEY99011.1| hypothetical protein VOA_001901 [Vibrio sp. RC586]
Length = 236
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L+
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIEREKIALRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ G PL+VL+QVNTSGE SKSGI+P + E + PNL GLM+I +P
Sbjct: 115 EQ-RPAGMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELIS-GLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQKLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|225682299|gb|EEH20583.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226289680|gb|EEH45164.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 302
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 105/200 (52%), Gaps = 34/200 (17%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS------------ 76
LP I+WHF+G LQSNK TL V L VE V EK A+ LD+
Sbjct: 102 LPCGIRWHFIGGLQSNKCVTLARDVRGLWAVESVDTEKKASLLDRGWGERDVDVNEEGGE 161
Query: 77 -----NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
N G + L+V VQVNTSGEESKSG+ P+ + + +R +CP L+ GLMTIG
Sbjct: 162 KGQSVNAGNR-LRVFVQVNTSGEESKSGVKPAEAVSLCRFIREKCPRLKLQGLMTIGAIA 220
Query: 132 YTSTP------ENFRTLLNCRAEVCKALGMAED-------QCELSMGMSGDFEQAIEMGS 178
+ E+F L R V K L + D ELSMGMS DFE AI MGS
Sbjct: 221 RSKATTVENENEDFVCLRETRDMVEKELELVADEGEGEAEGLELSMGMSEDFEGAIAMGS 280
Query: 179 TSVRIGSTIFG---PREYAK 195
VR+GSTIFG P+E A+
Sbjct: 281 NQVRVGSTIFGVRPPKEQAR 300
>gi|302674964|ref|XP_003027166.1| hypothetical protein SCHCODRAFT_61244 [Schizophyllum commune H4-8]
gi|300100852|gb|EFI92263.1| hypothetical protein SCHCODRAFT_61244 [Schizophyllum commune H4-8]
Length = 280
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 112/204 (54%), Gaps = 36/204 (17%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG-- 79
+DK LP +I+WHF+G LQSNK+KTL+ +PNL ++ + + K AN L+KA+S G
Sbjct: 68 LVDKAKQLPAEIRWHFIGTLQSNKSKTLV-AIPNLHTIQTLTSTKAANLLNKALSEAGDA 126
Query: 80 RKPLKVLVQVNTSGEESKSGIDPSSC----------------LGIVEHVRLRCPNLEFSG 123
++ L VL+QVNTSGEE+KSG+ P + + + HV CP L G
Sbjct: 127 QRRLNVLIQVNTSGEENKSGLPPLTSTDATLTQTDAADTHELVKLAVHVLEHCPFLRLQG 186
Query: 124 LMTIGMPDYTSTPE------NFRTLLNCRAEVCKALGM----------AEDQCELSMGMS 167
LMTIG + + + +F+TLL R + LG E + +SMGMS
Sbjct: 187 LMTIGSIEQSINAKEGEENHDFKTLLATRDALQAHLGARFADKTAAYGEEGRLLVSMGMS 246
Query: 168 GDFEQAIEMGSTSVRIGSTIFGPR 191
DFE A+ GS VR+G+ IFG R
Sbjct: 247 ADFEAALRAGSDIVRVGTGIFGGR 270
>gi|389750396|gb|EIM91567.1| hypothetical protein STEHIDRAFT_165830 [Stereum hirsutum FP-91666
SS1]
Length = 281
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 109/192 (56%), Gaps = 23/192 (11%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN-LGR 80
+DK LP DI+WHF+G LQSNK+K +L +PN+ ++ V + K AN L KA+S+ R
Sbjct: 72 LVDKAQMLPRDIRWHFIGTLQSNKSK-ILASIPNIYAIQTVTSIKAANALTKALSSEPSR 130
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLG--------IVEHVRLRCPNLEFSGLMTIGMPDY 132
PL +L+QVNTSGE++KSG+ P + + HV CP+L GLMTIG
Sbjct: 131 PPLNILLQVNTSGEDAKSGLPPLTTTSESDGELTQLARHVIKECPHLRLQGLMTIGALSE 190
Query: 133 TSTPE----NFRTLLNCRAEVCKALGMAEDQCE--------LSMGMSGDFEQAIEMGSTS 180
+ + E +F L R + + LG + E +SMGMS DFE A+ GS
Sbjct: 191 SLSGEAENKDFERLKATRDVLQEVLGKEFPEGEWGVDGRLLMSMGMSSDFEAALRAGSDI 250
Query: 181 VRIGSTIFGPRE 192
VR+G+ IFG R+
Sbjct: 251 VRVGTGIFGERK 262
>gi|421353284|ref|ZP_15803618.1| hypothetical protein VCHE45_0607 [Vibrio cholerae HE-45]
gi|422305894|ref|ZP_16393081.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
CP1035(8)]
gi|395955057|gb|EJH65662.1| hypothetical protein VCHE45_0607 [Vibrio cholerae HE-45]
gi|408627894|gb|EKL00684.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
CP1035(8)]
Length = 236
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTS E SKSGI+P + E + R PNL GLM+I +P
Sbjct: 115 EQ-RPVNMPPLQVLIQVNTSDEASKSGIEPQQLFTLAELIS-RLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY + F L AE+ + L Q + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQL----AELQQQLAQKYPQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFG 228
Query: 190 PREYAK 195
R+Y++
Sbjct: 229 ERDYSR 234
>gi|357017103|gb|AET50580.1| hypothetical protein [Eimeria tenella]
Length = 319
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPED WH +G LQ+NK KTL+ GV NL V+ V + ++A L + R L VLVQ
Sbjct: 142 LPEDYHWHLIGKLQTNKVKTLVAGVRNLYSVDSVDSVRLAEVLQRETKKANRH-LNVLVQ 200
Query: 89 VNTSGEESKSGI---DPSSC----LGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
VN GE K+G+ D +S L +V ++ +CPNL+F G MT+ D F+
Sbjct: 201 VNAGGEPQKNGVLGDDWNSTKHLSLSLVYYILDKCPNLKFRGFMTVAPQDVDEALSTFKR 260
Query: 142 LLNCRAEVCK----ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + E + A + + ELSMGMS D + A+E GST VRIG+ IFG R
Sbjct: 261 MKELKEEAARDEKIAAALNGEDLELSMGMSRDMQTAVENGSTQVRIGTAIFGAR 314
>gi|156064729|ref|XP_001598286.1| hypothetical protein SS1G_00372 [Sclerotinia sclerotiorum 1980]
gi|154691234|gb|EDN90972.1| hypothetical protein SS1G_00372 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 265
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 100/177 (56%), Gaps = 16/177 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD--------KAVSNLGR 80
LP +IKWHF+G LQSNK K L + NL +V V ++K A+ L A S+
Sbjct: 74 LPRNIKWHFIGGLQSNKCKPLASTISNLYLVSSVDSQKKASQLSIGRSLLPVPADSSSHP 133
Query: 81 KPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP--- 136
PL + +QVNTSGE SKSG+ P + ++V CP L+ GLMTIG +
Sbjct: 134 SPLNIHIQVNTSGESSKSGVTPGKETTELCKYVIEECPFLKLVGLMTIGAIARSQMKEGE 193
Query: 137 --ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+F L R V K LG+ + ELSMGMS DFE+AI GS VR+GSTIFG R
Sbjct: 194 ENEDFIVLREERDRVEKELGL--EGLELSMGMSEDFEEAIRQGSGEVRVGSTIFGQR 248
>gi|449540494|gb|EMD31485.1| hypothetical protein CERSUDRAFT_89014 [Ceriporiopsis subvermispora
B]
Length = 271
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 104/185 (56%), Gaps = 22/185 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DIKWHF+G LQSNKAK L + NL ++ + + K A L KA+ PL VL+Q
Sbjct: 79 LPADIKWHFIGTLQSNKAKGL-ASIENLACIQTLSSAKAATALSKALPANRPTPLNVLLQ 137
Query: 89 VNTSGEESKSGIDP--------SSCLGIVEHVRLRCPNLEFSGLMTIG-MPDYTSTPE-- 137
VNTSGE++KSG+DP + + + H+ CP L GLMTIG + + S+ E
Sbjct: 138 VNTSGEDAKSGVDPLTPDHAPQADLISLARHIINECPRLHLQGLMTIGSLTESLSSDEKP 197
Query: 138 --NFRTLLNCRAEVCKALGM--------AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
+F L R + AL E + LSMGMS DFE AI+ GS VR+G++I
Sbjct: 198 NADFERLKQTRDLLEAALTKEHLSGKWGEEGRLLLSMGMSKDFEAAIKSGSDIVRVGTSI 257
Query: 188 FGPRE 192
FG R+
Sbjct: 258 FGFRQ 262
>gi|353227567|emb|CCA78070.1| related to Putative unspecific racemase [Piriformospora indica DSM
11827]
Length = 271
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 106/190 (55%), Gaps = 29/190 (15%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WHF+G LQSNKAK LL VPNL +V+ + + K A LD+ + PL V++Q
Sbjct: 79 LPRDIRWHFIGTLQSNKAK-LLAHVPNLYVVQTLTSAKAATALDRNLPETRETPLNVMLQ 137
Query: 89 VNTSGEESKSGI-----------DPSSCLGIVE---HVRLRCPNLEFSGLMTIG-----M 129
VNTSGE+SKSG+ +PS+ L +V+ H+ C L G+MTIG M
Sbjct: 138 VNTSGEQSKSGLAPLDVDEGGEHEPSASLEVVDLASHILSSCKRLHLLGVMTIGSFEASM 197
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCE--------LSMGMSGDFEQAIEMGSTSV 181
D P +F TL R + + L + + LSMGMS DF+ AI GS V
Sbjct: 198 DDSHPNP-DFETLRKTRDVLTEKLKEKYPEAQWGQDGRLLLSMGMSSDFQAAILAGSDIV 256
Query: 182 RIGSTIFGPR 191
R+G++IFG R
Sbjct: 257 RVGTSIFGQR 266
>gi|328858513|gb|EGG07625.1| hypothetical protein MELLADRAFT_62402 [Melampsora larici-populina
98AG31]
Length = 262
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 105/181 (58%), Gaps = 21/181 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP------ 82
LP+DIKWHF+G LQ+NK K +LG +PNL VE V K A L+K+ S L +
Sbjct: 79 LPQDIKWHFIGALQTNKCK-ILGSIPNLFAVETVDTIKKAEALNKSRSQLSQTSCNPIAK 137
Query: 83 LKVLVQVNTSGEESKSGI--------DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS 134
LK+ +Q+NTS E +KSGI D S + + +++ C +LE SGLMTIG ++
Sbjct: 138 LKIYIQINTSNELNKSGIKVEQESIEDTSELILLSNYIKEDCESLELSGLMTIGSFKEST 197
Query: 135 TP----ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
T E+F L+ R + +G+ LSMGMS DF AI MGS +VR+GS IFG
Sbjct: 198 TDSDFNEDFHRLIKIRNLLEDKIGIK--PLGLSMGMSSDFSLAIRMGSDNVRVGSKIFGE 255
Query: 191 R 191
R
Sbjct: 256 R 256
>gi|344304977|gb|EGW35209.1| hypothetical protein SPAPADRAFT_133045 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 99/171 (57%), Gaps = 11/171 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQS KAK L V +L VE + + K LD +G +KV +Q
Sbjct: 73 LPKDIKWHFIGGLQSGKAKDLAKHVESLYAVETIDSLKKCKQLDNTREKVGGSEIKVFLQ 132
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL----RCPNLEFSGLMTIG-MPDYTSTP---ENFR 140
+NTS EE KSG + + E V+ C L+ GLMTIG + TS ++F+
Sbjct: 133 INTSCEEQKSGYNSEVLDDLEETVKYLLSDECKKLKLIGLMTIGSFSESTSESGENQDFK 192
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L+ + + K + ELSMGMS DFEQAI+ GSTSVR+GS+IFG R
Sbjct: 193 KLVEVKEILDKKYQL---DLELSMGMSNDFEQAIKQGSTSVRVGSSIFGAR 240
>gi|159114248|ref|XP_001707349.1| Hypothetical protein, enzyme with a TIM-barrel fold [Giardia
lamblia ATCC 50803]
gi|157435453|gb|EDO79675.1| hypothetical protein, enzyme with a TIM-barrel fold [Giardia
lamblia ATCC 50803]
Length = 230
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 118/186 (63%), Gaps = 11/186 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + L+K + + DI+WHF+GHLQ+NKA+ + +PN +V+ V ++++A L
Sbjct: 47 YVQELVKKAEAVQ--GVASDIEWHFIGHLQTNKARDV-AFIPNC-VVQTVDSDRLARRLS 102
Query: 73 KAVSN-LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
+ + LG PL+V++Q+N SGE +KSG + + + + P L GLMTIG PD
Sbjct: 103 ELRPDELG--PLRVMIQINISGELTKSGCTVEDAIELAQLISA-LPRLRLIGLMTIGAPD 159
Query: 132 YTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ +FR L++ R + +A+ + E++ ELSMGMS D++ A++MG+ VR+GS IFG R
Sbjct: 160 --ASEYSFRALVDARNVIEQAVKL-EEKLELSMGMSSDYQLAVKMGADYVRVGSAIFGER 216
Query: 192 EYAKKQ 197
Y++++
Sbjct: 217 TYSQQK 222
>gi|408400111|gb|EKJ79197.1| hypothetical protein FPSE_00627 [Fusarium pseudograminearum CS3096]
Length = 263
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 103/179 (57%), Gaps = 21/179 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP----L 83
LP+ ++WHF+G LQS K++ G +PNL V + K A L+ +NL +P +
Sbjct: 80 LPKTVQWHFIGGLQSGHCKSI-GKIPNLFCVSSIDTSKKAQLLNTTRANLLSSEPDAPRI 138
Query: 84 KVLVQVNTSGEESKSGIDPSS-----CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTP 136
V VQVNTSGEESKSG P C I+E CPNL GLMTIG +TP
Sbjct: 139 GVHVQVNTSGEESKSGCAPGDNTVALCREIIE----TCPNLRLLGLMTIGAIARSKATTP 194
Query: 137 E----NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E +F +L R V K LG+ + ELSMGMS DFE A+ +GS+ VR+GSTIFG R
Sbjct: 195 ETENEDFVSLKEQRDLVAKELGLDLESLELSMGMSEDFEGAVRLGSSEVRVGSTIFGQR 253
>gi|221483679|gb|EEE21991.1| proline synthetase associated protein, putative [Toxoplasma gondii
GT1]
Length = 349
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 110/237 (46%), Gaps = 69/237 (29%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK----PLKVLV 87
D+KWH +GHLQSNKAK LL G P L VE V ++K+A L+ AV+ + + PL+VLV
Sbjct: 113 DLKWHMIGHLQSNKAKQLLMGCPQLYAVETVDSKKLAKTLNDAVATVLSQRNGAPLRVLV 172
Query: 88 QVNTSGEESKSGIDPSSCLG----------------IVEHVRLRCPNLEFSGLMTIGMPD 131
QVN S E SKSG+ S G +VE++ CP+L FSGLMTIG PD
Sbjct: 173 QVNASDEASKSGVRLHSVDGNRGETETPCGDSEVRELVEYIVDSCPHLRFSGLMTIGHPD 232
Query: 132 YTSTPENFRTLLNCR--------------------------------------------- 146
T F + R
Sbjct: 233 PERTSGTFAKMATLRLDLLKLPHVRQVFMSRTESAGEREAYDRSERKSSNTSEAARNTRN 292
Query: 147 -AEVCKALGMA---EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
AE + L A +D ELSMGMSGD +AI GST VRIG+ IFG R K ++
Sbjct: 293 KAEEARPLHAAFDRDDLFELSMGMSGDMAEAIIHGSTEVRIGTAIFGSRPLQPKSRS 349
>gi|237841025|ref|XP_002369810.1| proline synthetase co-transcribed protein, putative [Toxoplasma
gondii ME49]
gi|211967474|gb|EEB02670.1| proline synthetase co-transcribed protein, putative [Toxoplasma
gondii ME49]
Length = 350
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 110/237 (46%), Gaps = 69/237 (29%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK----PLKVLV 87
D+KWH +GHLQSNKAK LL G P L VE V ++K+A L+ AV+ + + PL+VLV
Sbjct: 114 DLKWHMIGHLQSNKAKQLLMGCPQLYAVETVDSKKLAKTLNDAVATVLSQRNGAPLRVLV 173
Query: 88 QVNTSGEESKSGIDPSSCLG----------------IVEHVRLRCPNLEFSGLMTIGMPD 131
QVN S E SKSG+ S G +VE++ CP+L FSGLMTIG PD
Sbjct: 174 QVNASDEASKSGVRLHSVDGNRGETETPCGDSEVRELVEYIVDSCPHLRFSGLMTIGHPD 233
Query: 132 YTSTPENFRTLLNCR--------------------------------------------- 146
T F + R
Sbjct: 234 PERTSGTFAKMATLRLDLLKLPHVRQVFMSRTESAGEREAYDRSERKSSNTSEAARNTRN 293
Query: 147 -AEVCKALGMA---EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
AE + L A +D ELSMGMSGD +AI GST VRIG+ IFG R K ++
Sbjct: 294 KAEEARPLHAAFDRDDLFELSMGMSGDMAEAIIHGSTEVRIGTAIFGSRPLQPKSRS 350
>gi|221504298|gb|EEE29973.1| proline synthetase associated protein, putative [Toxoplasma gondii
VEG]
Length = 350
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 108/237 (45%), Gaps = 69/237 (29%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV----SNLGRKPLKVLV 87
D+KWH +GHLQSNKAK LL G P L VE V ++K+A L+ AV S PL+VLV
Sbjct: 114 DLKWHMIGHLQSNKAKQLLMGCPQLYAVETVDSKKLAKTLNDAVAAVLSQRNGAPLRVLV 173
Query: 88 QVNTSGEESKSGIDPSSCLG----------------IVEHVRLRCPNLEFSGLMTIGMPD 131
QVN S E SKSG+ S G +VE++ CP+L FSGLMTIG PD
Sbjct: 174 QVNASDEASKSGVRLHSVDGNRGETETPCGDSEVRELVEYIVDSCPHLRFSGLMTIGHPD 233
Query: 132 YTSTPENFRTLLNCR--------------------------------------------- 146
T F + R
Sbjct: 234 PERTSGTFAKMATLRLDLLKLPHVRQVFMSRTESAGEREAYDRSERKSSNTSEAARNTRN 293
Query: 147 -AEVCKALGMA---EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
AE + L A +D ELSMGMSGD +AI GST VRIG+ IFG R K ++
Sbjct: 294 KAEEARPLHAAFDRDDLFELSMGMSGDMAEAIIHGSTEVRIGTAIFGSRPLQPKSRS 350
>gi|401884377|gb|EJT48544.1| hypothetical protein A1Q1_02452 [Trichosporon asahii var. asahii
CBS 2479]
gi|406695612|gb|EKC98914.1| hypothetical protein A1Q2_06668 [Trichosporon asahii var. asahii
CBS 8904]
Length = 272
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 108/185 (58%), Gaps = 24/185 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-KPLKVLV 87
LP+DI WHFVG LQSNK+K +L +PNL ++E + +EK+A L KA+ L + ++V +
Sbjct: 94 LPKDICWHFVGSLQSNKSK-MLAAIPNLFVLETLSSEKLAGTLQKALHALPEERTMRVYL 152
Query: 88 QVNTSGEESKSGIDP-------SSCLGIVEHVRLRCPNLEFSGLMTIGM----------P 130
QVNTSGE++KSG+ P + HV C LE +G+MTIG P
Sbjct: 153 QVNTSGEDNKSGLPPLKGTDQGQELAKLALHVVNDCDRLELAGVMTIGSFEHSHAAGENP 212
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D+ + E + L E+ K G D E+SMGMS DF +A++ GS+SVR+G+ IFG
Sbjct: 213 DFLTLKETKKYL----EEILKEAGKERD-LEISMGMSADFVEAVKEGSSSVRVGTRIFGA 267
Query: 191 REYAK 195
R K
Sbjct: 268 RPKKK 272
>gi|209875933|ref|XP_002139409.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555015|gb|EEA05060.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 243
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDI WHF+GHLQ NK ++LL V NL ++E + + ++A + K + R + V +Q
Sbjct: 78 LPEDIMWHFIGHLQRNKVRSLLT-VKNLYIIESLDSIELAYLIQKICEEMKR-YVNVYIQ 135
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
+ TS E +K+GI+ +V++V CP L F G MTI D E F L++ RA
Sbjct: 136 IKTSTETTKTGINIEESKKLVKYVLDHCPRLNFLGFMTIADNDKNKCSECFSKLVDLRAR 195
Query: 149 VCKAL---GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + +C+LSMGMS DFE AI + +RIGS IFG R
Sbjct: 196 TLNWMTEQAYSTARCDLSMGMSDDFEIAITHKTNEIRIGSAIFGLR 241
>gi|213403758|ref|XP_002172651.1| alanine racemase [Schizosaccharomyces japonicus yFS275]
gi|212000698|gb|EEB06358.1| alanine racemase [Schizosaccharomyces japonicus yFS275]
Length = 240
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 103/168 (61%), Gaps = 12/168 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
+P+D+ WHF+G +QS+K K + + NL +E V EK A ++ A L KPL+V VQ
Sbjct: 65 MPKDVNWHFIGAMQSSKCKKI-ASIENLWCIETVDTEKKARLINSAREELN-KPLRVYVQ 122
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS-----TPENFRTLL 143
VNTSGE++KSG+ P L + + ++ C +L+ G+MTIG +T+ T +F L+
Sbjct: 123 VNTSGEDNKSGVAPEDALPLCKFIKDSCSHLQLQGIMTIG--SFTNSLNEKTNPDFEKLI 180
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++ L + E+SMGMS D+E AI+ GS +VR+G TIFG R
Sbjct: 181 QLRKQLENDLSC---KLEVSMGMSADYELAIQYGSDNVRVGRTIFGER 225
>gi|358378177|gb|EHK15859.1| hypothetical protein TRIVIDRAFT_174581 [Trichoderma virens Gv29-8]
Length = 252
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 94/175 (53%), Gaps = 17/175 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVLV 87
LP I WHF+G LQS K L +PNL V V K A L A +N L V V
Sbjct: 73 LPRSIHWHFIGGLQSGHCKNL-AKIPNLFCVSSVDTLKKAQLLSSARAANPALGKLNVHV 131
Query: 88 QVNTSGEESKSGIDP-----SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN-- 138
QVNTSGEE KSG P S C IV+ CP L GLMTIG +TP+N
Sbjct: 132 QVNTSGEEGKSGCAPGEETVSLCREIVQ----SCPGLNLLGLMTIGAIARSKATTPDNEN 187
Query: 139 --FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F TL R V + LG+ D ELSMGMS DFE AI GS+ VR+GSTIFG R
Sbjct: 188 EDFETLRAQRDLVARELGLGPDTLELSMGMSEDFEGAIAQGSSEVRVGSTIFGQR 242
>gi|365541058|ref|ZP_09366233.1| hypothetical protein VordA3_15522 [Vibrio ordalii ATCC 33509]
Length = 233
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 11/168 (6%)
Query: 30 PE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
PE D++WHF+G +QSNK++ + N V V KIA L+ +G PL+VL+Q
Sbjct: 74 PELDLEWHFIGPIQSNKSRIV---AENFTWVHTVDRSKIAQRLNDQ-RPVGMPPLQVLIQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCR 146
VNTSGE SKSGI+ + + E + PNL GLM+I +P+Y + F+ L + +
Sbjct: 130 VNTSGESSKSGINEHEIVELAELISA-LPNLTLRGLMSIPENVPNYAAQLAAFQKLASLQ 188
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
A++ + + LSMGMSGD + AIE GST VRIG+ IFG R+YA
Sbjct: 189 AQLSERFSGVDT---LSMGMSGDMQAAIEAGSTMVRIGTAIFGARDYA 233
>gi|225555026|gb|EEH03319.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 306
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 103/198 (52%), Gaps = 39/198 (19%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---------- 78
LP I+WHF+G LQSNK TL V L VE V +EK A+ LD+
Sbjct: 106 LPPGIRWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASLLDRGWGERSTQAGVGEDA 165
Query: 79 -----------GRKP------LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEF 121
GR L+V VQVNTSGE+SKSG++P+ + + ++R +CP L+
Sbjct: 166 ATTTAAASASEGRDAGADGDRLRVFVQVNTSGEDSKSGVEPAEAVRLCRYIREQCPRLKL 225
Query: 122 SGLMTIGMPDYTSTP------ENFRTLLNCRAEVCKALGMAE------DQCELSMGMSGD 169
GLMTIG + E+F L + V K LG+ E + ELSMGMSGD
Sbjct: 226 QGLMTIGAIARSRATTMENKNEDFLCLRETKERVEKELGLLEGDEEAGEGLELSMGMSGD 285
Query: 170 FEQAIEMGSTSVRIGSTI 187
FE AI MGST VR+GS +
Sbjct: 286 FEGAIAMGSTQVRVGSVL 303
>gi|367054022|ref|XP_003657389.1| hypothetical protein THITE_2123022 [Thielavia terrestris NRRL 8126]
gi|347004655|gb|AEO71053.1| hypothetical protein THITE_2123022 [Thielavia terrestris NRRL 8126]
Length = 261
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 99/179 (55%), Gaps = 22/179 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK-----AVSNLGRKPL 83
LP I+WHF+G LQS + K L +PNL V + + K A LDK S+ L
Sbjct: 79 LPRTIRWHFIGGLQSGRCKDL-AKIPNLWCVSSIDSLKKAQLLDKHRGEKIKSDPETPKL 137
Query: 84 KVLVQVNTSGEESKSGIDP-----SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTP 136
V VQVNTSGEESKSG P S C I+ CPNL GLMTIG +T
Sbjct: 138 NVHVQVNTSGEESKSGCAPGDEVVSLCRAIIND----CPNLHLLGLMTIGAIARSVATTV 193
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
EN FR L R V K LG+ + + ELSMGMS DFE AI MGS VRIGSTIFG R
Sbjct: 194 ENENEDFRLLKEQRDLVVKQLGL-DRELELSMGMSEDFEGAIAMGSDEVRIGSTIFGQR 251
>gi|240279165|gb|EER42670.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325089453|gb|EGC42763.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 306
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 103/198 (52%), Gaps = 39/198 (19%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---------- 78
LP I+WHF+G LQSNK TL V L VE V +EK A+ LD+
Sbjct: 106 LPPGIRWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASLLDRGWGERSTQAGVGEDA 165
Query: 79 -----------GRKP------LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEF 121
GR L+V VQVNTSGE+SKSG++P+ + + ++R +CP L+
Sbjct: 166 ATTTAAASASEGRDAGADGDRLRVFVQVNTSGEDSKSGVEPAEAVRLCRYIREQCPRLKL 225
Query: 122 SGLMTIGMPDYTSTP------ENFRTLLNCRAEVCKALGMAE------DQCELSMGMSGD 169
GLMTIG + E+F L + V K LG+ E + ELSMGMSGD
Sbjct: 226 QGLMTIGAIARSRATTMENKNEDFLCLRETKERVEKELGLLEGDEEAGEGLELSMGMSGD 285
Query: 170 FEQAIEMGSTSVRIGSTI 187
FE AI MGST VR+GS +
Sbjct: 286 FEGAIAMGSTQVRVGSVL 303
>gi|164657386|ref|XP_001729819.1| hypothetical protein MGL_2805 [Malassezia globosa CBS 7966]
gi|159103713|gb|EDP42605.1| hypothetical protein MGL_2805 [Malassezia globosa CBS 7966]
Length = 768
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 115/231 (49%), Gaps = 58/231 (25%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + LI+ R LP+DI+WHF+G LQSNKAK LL VPNL V+ V +EK+A L+
Sbjct: 301 YVQELIEKARV-----LPDDIQWHFIGGLQSNKAK-LLAAVPNLYAVQSVDSEKLALGLE 354
Query: 73 KAV-----SNLGRKPLKVLVQVNTSGEESKSGI------------DPSSCLGIVEHVRLR 115
K + ++L + PL V +QVNTSGE KSG+ + L + + + L
Sbjct: 355 KTLAKPEHASLRKAPLYVYIQVNTSGEAGKSGVPAMDAPWDGNSSNKPPLLSLAQTIMLA 414
Query: 116 CPNLEFSGLMTIGMPDYTSTPE--------NFRTLLNCRAEVCKAL-------------- 153
CP++ FSGLMTIG + + + +F L+ R + +AL
Sbjct: 415 CPHMRFSGLMTIGALTNSQSVQGHEERENPDFLALVKSRKYLAQALEQDSEFQAKLSNTS 474
Query: 154 -------------GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ E ELSMGMS D AI MGST VRIG+ FG R
Sbjct: 475 FWAPQGNLQNVYGTLREHDLELSMGMSADMSSAIAMGSTCVRIGNDSFGAR 525
>gi|253700158|ref|YP_003021347.1| alanine racemase [Geobacter sp. M21]
gi|251775008|gb|ACT17589.1| alanine racemase domain protein [Geobacter sp. M21]
Length = 230
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
+ LP+DI WHF+G+LQSNK + + G V D++ V +A +D+ LG K +V
Sbjct: 65 QAELPKDISWHFIGNLQSNKVRQITGMV---DLIHSVDRLSLATEIDRQWGALG-KVCEV 120
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
L+QVN S EE+K G +V + PNL GLMT MP + PE R
Sbjct: 121 LIQVNISQEETKGGTSSEELFQLVRDA-AKLPNLRVVGLMT--MPPFFDDPEGARPYFRE 177
Query: 146 RAEVCKALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ + L A + ELSMGMSGDFE AIE G+T VR+GS +FG R+Y
Sbjct: 178 LRELARELEAAAIPGVEMRELSMGMSGDFEAAIEEGATLVRVGSALFGERQY 229
>gi|399217021|emb|CCF73708.1| unnamed protein product [Babesia microti strain RI]
Length = 223
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 10/164 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+G +QSNK K L V NL VE + +E IA+ L+K ++ K + V +Q
Sbjct: 64 LPKDIRWHFIGKIQSNKCKQ-LAKVDNLFQVESLDSEYIASELNKCLT----KKINVYIQ 118
Query: 89 VNTSGEESKSGI---DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
+NTSGEESK+GI D ++ +V+++ C NL+F GLMTIG PD + F L
Sbjct: 119 INTSGEESKNGITFDDQTTLFNMVKYIINDCNNLKFCGLMTIGHPDLDKCEKCFSILSRL 178
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
R EV K E E SMGMS D+ AI+ + +R+G +F
Sbjct: 179 RREVEK--NFPEIALESSMGMSNDYHLAIKENTNQIRLGRCLFN 220
>gi|400600563|gb|EJP68237.1| YggS family pyridoxal phosphate enzyme [Beauveria bassiana ARSEF
2860]
Length = 263
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 99/179 (55%), Gaps = 21/179 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-----GRKPL 83
LP ++WHF+G LQS+ K+L +PNL V V K A LD A + L PL
Sbjct: 80 LPRTVQWHFIGGLQSSHCKSL-ARIPNLFCVSSVDTPKKARLLDAARAVLRDADPAVPPL 138
Query: 84 KVLVQVNTSGEESKSGIDPSS-----CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTP 136
V VQVNTSGE++KSG P C I EH C +L+ GLMTIG +TP
Sbjct: 139 GVHVQVNTSGEDAKSGCAPGDETVALCREIAEH----CDSLKLLGLMTIGAIARSKATTP 194
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
EN F L R V +ALG+ + ELSMGMS DFE AI GS VR+GSTIFG R
Sbjct: 195 ENRNEDFVALKEQRRLVAEALGVEPESLELSMGMSEDFEGAIAEGSGEVRVGSTIFGQR 253
>gi|336125239|ref|YP_004567287.1| hypothetical protein VAA_01657 [Vibrio anguillarum 775]
gi|335342962|gb|AEH34245.1| hypothetical protein VAA_01657 [Vibrio anguillarum 775]
Length = 233
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 99/168 (58%), Gaps = 11/168 (6%)
Query: 30 PE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
PE D++WHF+G +QSNK++ + N V V KIA L+ G PL+VL+Q
Sbjct: 74 PELDLEWHFIGPIQSNKSRIV---AENFAWVHTVDRSKIAQRLNDQ-RPAGMPPLQVLIQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCR 146
VNTSGE SKSGI + + E + PNL GLM+I +PDY + F+ L + +
Sbjct: 130 VNTSGESSKSGIGEHEIVELAELISA-LPNLTLRGLMSIPENVPDYAAQLAAFQKLASLQ 188
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
A++ + + LSMGMSGD + AIE GST VRIG+ IFG R+YA
Sbjct: 189 AQLSERFSGLDT---LSMGMSGDMQAAIEAGSTMVRIGTAIFGARDYA 233
>gi|296818063|ref|XP_002849368.1| alanine racemase family protein [Arthroderma otae CBS 113480]
gi|238839821|gb|EEQ29483.1| alanine racemase family protein [Arthroderma otae CBS 113480]
Length = 280
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 103/190 (54%), Gaps = 36/190 (18%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP------ 82
LP +I+WHF+G LQSNK L V L VE V EK A+ LDK G +P
Sbjct: 93 LPPEIRWHFIGGLQSNKCVMLAREVRGLWAVESVDTEKKASLLDKG---WGERPEFKDKG 149
Query: 83 --------------LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG 128
L+V VQVNTSGEES+ ++ + +R +CP L+ GLMTIG
Sbjct: 150 TVDTDGTSEQEDRRLRVFVQVNTSGEESEPSVE------LCRFIREQCPRLKLQGLMTIG 203
Query: 129 M--PDYTSTPEN----FRTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSV 181
+TPEN F L + + V + L + +D+ ELSMGMS DFE AI MGS+ V
Sbjct: 204 AIARSKATTPENENEDFACLRDTKDMVEEKLSLEGKDRLELSMGMSNDFEGAIAMGSSQV 263
Query: 182 RIGSTIFGPR 191
R+GSTIFG R
Sbjct: 264 RVGSTIFGAR 273
>gi|289523459|ref|ZP_06440313.1| pyridoxal phosphate enzyme, YggS family [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503151|gb|EFD24315.1| pyridoxal phosphate enzyme, YggS family [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 234
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 100/170 (58%), Gaps = 10/170 (5%)
Query: 26 KYNLPEDIK--WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
K P D+K WH +GHLQ NKAK + D+++ + N +A L+K ++ L +K +
Sbjct: 69 KERWPSDLKLPWHMIGHLQRNKAKL---AIQLFDIIQSIDNMDLAAVLEKRLAAL-KKNM 124
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRT 141
+VL++VN SGE SK G+DP + E++ CP+L+ GLM IG + D +F
Sbjct: 125 EVLIEVNISGEISKYGVDPKDVSSMAEYILRNCPSLKLVGLMGIGPLVKDREKIISSFVL 184
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L + + K +G+ ELSMGMS DFE AI+ GST VRIG IFGPR
Sbjct: 185 LRRLKEKTEKDIGL--QLHELSMGMSDDFELAIKEGSTMVRIGRAIFGPR 232
>gi|405973236|gb|EKC37960.1| Proline synthetase co-transcribed bacterial-like protein
[Crassostrea gigas]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 91/139 (65%), Gaps = 4/139 (2%)
Query: 58 MVEGVGNEKIANHLDKAVSNLGRK-PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRC 116
MVE V + KIA L+K + LKV++Q+NTS EE+KSG + +V+++ C
Sbjct: 1 MVETVDSNKIAETLNKQWETRKKAGKLKVMIQINTSMEENKSGCKEEDMVNLVKNILENC 60
Query: 117 PNLEFSGLMTIGMPDY--TSTPE-NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQA 173
PNLEF GLMTIG D+ + P +F LL CR +C+ L + + E+SMGMS DFE A
Sbjct: 61 PNLEFIGLMTIGSFDHDLSKGPNPDFLKLLKCRERLCEELKLDKKNVEISMGMSADFEHA 120
Query: 174 IEMGSTSVRIGSTIFGPRE 192
IE+GST+VR+GSTIFG RE
Sbjct: 121 IELGSTNVRVGSTIFGARE 139
>gi|403172978|ref|XP_003332086.2| YggS family pyridoxal phosphate enzyme [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170078|gb|EFP87667.2| YggS family pyridoxal phosphate enzyme [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 282
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 19/184 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK----PLK 84
LP DIKWHF+G LQSNK K +LG +PNL VE V + A L+K+ S L PL+
Sbjct: 99 LPGDIKWHFIGALQSNKCK-ILGAIPNLFAVETVDSLHKAQLLEKSRSGLASSVQVNPLE 157
Query: 85 VLVQVNTSGEESKSG-IDPSS-------CLGIVEHVRLRCPNLEFSGLMTIGMPDYTS-- 134
V +QVNTS E SK+G I PS+ ++++ C L+ +GLMTIG +
Sbjct: 158 VYLQVNTSEEASKAGFITPSNEPILSSNLHSTAKYIKEECRWLKLAGLMTIGSIGQSKSD 217
Query: 135 --TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
T ++F L+ R ++ ++LG E LSMGMS DF AI+MGS +VR+GS+IFG R
Sbjct: 218 QGTNKDFERLVQLRDQLSESLGGLE--LGLSMGMSADFALAIKMGSDNVRVGSSIFGERP 275
Query: 193 YAKK 196
KK
Sbjct: 276 PFKK 279
>gi|149192339|ref|ZP_01870544.1| FkuA [Vibrio shilonii AK1]
gi|148833817|gb|EDL50849.1| FkuA [Vibrio shilonii AK1]
Length = 210
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 97/168 (57%), Gaps = 12/168 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G +QSNK + + + D V V KIA L+ G KP++VL+QVNT
Sbjct: 51 DIEWHFIGPIQSNKTRPV---AEHFDWVHTVDRAKIAQRLNDQRPQ-GMKPIQVLIQVNT 106
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEV 149
S E SKSG+D L + + + PNL G+M+I + DY S F+ L AEV
Sbjct: 107 SSEASKSGVDSEQVLELAQLIS-SLPNLTLRGVMSIPENVSDYQSQLIAFKAL----AEV 161
Query: 150 CKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L Q + LSMGMSGD E AIE GST VRIG+ IFG R+Y+ K
Sbjct: 162 KNLLAEKHPQVDTLSMGMSGDMEAAIEAGSTVVRIGTAIFGVRDYSNK 209
>gi|34541703|ref|NP_906182.1| hypothetical protein PG2126 [Porphyromonas gingivalis W83]
gi|419969979|ref|ZP_14485496.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas gingivalis
W50]
gi|34398021|gb|AAQ67081.1| conserved hypothetical protein TIGR00044 [Porphyromonas gingivalis
W83]
gi|392611798|gb|EIW94523.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas gingivalis
W50]
Length = 224
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 13/172 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
+P+D++WHF+G LQ+NK K + VP + M++ V + K+ + + + S +GR + VL++
Sbjct: 59 MPDDVEWHFIGPLQTNKVKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPN--LEFSGLMTIGMPDYTSTPEN----FRTL 142
V+ + E++KSG P ++E V R + ++ +GLM GM +T E FR L
Sbjct: 115 VHIASEDTKSGFTPEELPQVLEAVLARGSDTGVKIAGLM--GMATFTDDREQIRREFRRL 172
Query: 143 LNCRAEVC-KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ E+ + + D CELSMGMSGDFE AIE GST VRIG+TIFG R Y
Sbjct: 173 ASLFREMKERFFSDSADFCELSMGMSGDFELAIEEGSTIVRIGTTIFGERRY 224
>gi|118200267|dbj|BAF37074.1| hypothetical protein [Porphyromonas gingivalis]
Length = 224
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 13/172 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
+P+D++WHF+G LQ+NK K + VP + M++ V + K+ + + + S +GR + VL++
Sbjct: 59 MPDDVEWHFIGPLQTNKVKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPN--LEFSGLMTIGMPDYTSTPEN----FRTL 142
V+ + E++KSG P ++E V R + ++ +GLM GM +T E FR L
Sbjct: 115 VHIASEDTKSGFTPEELPQVLEAVLARGSDTGVKIAGLM--GMATFTDDREQIRREFRRL 172
Query: 143 LNCRAEVC-KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ E+ + + D CELSMGMSGDFE AIE GST VRIG+TIFG R Y
Sbjct: 173 ASLFREMRERFFSDSADFCELSMGMSGDFELAIEEGSTIVRIGTTIFGERRY 224
>gi|288572875|ref|ZP_06391232.1| alanine racemase domain protein [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568616|gb|EFC90173.1| alanine racemase domain protein [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 238
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 28 NLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
N PED I WH +GHLQ NKA+ + D++ V + ++A LD+ + P +
Sbjct: 72 NWPEDLSIPWHLIGHLQRNKARKAMA---LFDVIHSVDSLRLAETLDRLALEFDKAPYDI 128
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLL 143
+++VNTSGE SK GI P L +++ + C L GLMT+G D F L
Sbjct: 129 MIEVNTSGEASKHGISPEETLDLLDGIFSSCGYLNPVGLMTVGPLCDDQVRIGRAFGVLR 188
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
R + K G + ELSMGMSGDFE AIE GST VR+GS IFG RE
Sbjct: 189 ELRDQATKEFGRS--LPELSMGMSGDFELAIEEGSTIVRVGSAIFGERE 235
>gi|258625609|ref|ZP_05720491.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258582111|gb|EEW06978.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 236
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L+
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIEREKIAVRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ PL+VL+QVNTSGE SKSGI+P + E + PNL GLM+I +P
Sbjct: 115 EQ-RPADMPPLQVLIQVNTSGEASKSGIEPEQLFTLAELIS-GLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
DY + F L + ++ + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQLAELQQQLAQKYPHIDT---LSMGMSGDMQAAIEAGSTIVRIGTAIFGE 229
Query: 191 REYAK 195
R+Y++
Sbjct: 230 RDYSR 234
>gi|262164087|ref|ZP_06031826.1| hypothetical protein VMA_000528 [Vibrio mimicus VM223]
gi|262027615|gb|EEY46281.1| hypothetical protein VMA_000528 [Vibrio mimicus VM223]
Length = 236
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L+
Sbjct: 58 YVQEGVDKIRYFAEHHPQFALEWHFIGPLQSNKTRLV---AEHFDWVHTIEREKIAVRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ PL+VL+QVNTSGE SKSGI+P + E + PNL GLM+I +P
Sbjct: 115 EQ-RPADMPPLQVLIQVNTSGEASKSGIEPEQLFTLAELIS-GLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
DY + F L + ++ + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQLAELQQQLAQKYPHIDT---LSMGMSGDMQAAIEAGSTIVRIGTAIFGE 229
Query: 191 REYAK 195
R+Y++
Sbjct: 230 RDYSR 234
>gi|188994039|ref|YP_001928291.1| hypothetical protein PGN_0175 [Porphyromonas gingivalis ATCC 33277]
gi|118200279|dbj|BAF37085.1| hypothetical protein [Porphyromonas gingivalis]
gi|188593719|dbj|BAG32694.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 224
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 13/172 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
+P+D++WHF+G LQ+NK K + VP + M++ V + K+ + + + S +GR + VL++
Sbjct: 59 MPDDVEWHFIGPLQTNKVKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPN--LEFSGLMTIGMPDYTSTPEN----FRTL 142
V+ + E++KSG P ++E V R + ++ +GLM GM +T E FR L
Sbjct: 115 VHIASEDTKSGFTPEELPQVLEAVLARGSDTGVKIAGLM--GMATFTDDREQIRREFRRL 172
Query: 143 LNCRAEVC-KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ E+ + + D CELSMGMSGDFE AIE GST VRIG+TIFG R Y
Sbjct: 173 ASLFREMKERFFSDSADFCELSMGMSGDFELAIEEGSTIVRIGTTIFGERRY 224
>gi|343505678|ref|ZP_08743235.1| hypothetical protein VII00023_16806 [Vibrio ichthyoenteri ATCC
700023]
gi|342806442|gb|EGU41664.1| hypothetical protein VII00023_16806 [Vibrio ichthyoenteri ATCC
700023]
Length = 238
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 96/171 (56%), Gaps = 16/171 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+I+WHF+G +QSNK + + N V V KIA L D+ S L PL+VL+QVN
Sbjct: 77 EIEWHFIGPIQSNKTRPV---AENFAWVHTVDRAKIAQRLNDQRPSQL--PPLQVLIQVN 131
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLL---NC 145
TSGE SKSGID + + PNL GLM+I +PDY+S F+ L N
Sbjct: 132 TSGESSKSGIDEHQVFELAALIS-SLPNLTLRGLMSIPADVPDYSSQLHAFKQLAALKNT 190
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
AE L + LSMGMSGD E AIE GST VRIG+ IFG R+Y K
Sbjct: 191 LAERHPELNLDT----LSMGMSGDMEAAIEAGSTMVRIGTAIFGERDYTNK 237
>gi|346323820|gb|EGX93418.1| alanine racemase family protein (ISS) [Cordyceps militaris CM01]
Length = 256
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 95/175 (54%), Gaps = 13/175 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP-----L 83
LP ++WHF+G LQS K L VPNL V V K A L A + L L
Sbjct: 73 LPPTVRWHFIGGLQSGHCKAL-ARVPNLVCVSSVDTAKKAGLLHAARAALRDADPAVPRL 131
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN-- 138
V VQVNTSGEE+KSG P + + + RCP+LE GLMTIG +TPEN
Sbjct: 132 AVHVQVNTSGEEAKSGCAPGDETVALCREIHERCPSLELIGLMTIGAIARSKATTPENKN 191
Query: 139 --FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R V +ALG + ELSMGMS DFE AI GS VR+GSTIFG R
Sbjct: 192 DDFVALKEQRRLVAQALGRGPESLELSMGMSDDFEGAIAEGSGEVRVGSTIFGQR 246
>gi|170090438|ref|XP_001876441.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647934|gb|EDR12177.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 270
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 102/190 (53%), Gaps = 28/190 (14%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WHF+G LQSNKAKTL +PNL V+ + + K A+ L+KA+ + PL+V +Q
Sbjct: 77 LPADIRWHFIGTLQSNKAKTL-ASIPNLHAVQTLNSTKAASALNKALPSDRPYPLRVFIQ 135
Query: 89 VNTSGEESKSGIDPSSCLG---------IVEHVRLRCPNLEFSGLMTIGMPDYT-STPE- 137
VNTSGE SKSG+D S + +V CP L GLMTIG + + S E
Sbjct: 136 VNTSGETSKSGLDTLSSASDLDSSELAQLARYVLTECPKLRLEGLMTIGALELSLSASEV 195
Query: 138 ----NFRTLLNCRAEVCKALGMAEDQCE------------LSMGMSGDFEQAIEMGSTSV 181
+F L R + LG E LSMGMS DFE A++ GS V
Sbjct: 196 EKNADFERLKETRDVLDGYLGGLSGDGEKSWGRQGWGGLTLSMGMSSDFEAALKAGSDIV 255
Query: 182 RIGSTIFGPR 191
R+G+ IFG R
Sbjct: 256 RVGTGIFGQR 265
>gi|449146500|ref|ZP_21777273.1| hypothetical protein D908_17064 [Vibrio mimicus CAIM 602]
gi|449077732|gb|EMB48693.1| hypothetical protein D908_17064 [Vibrio mimicus CAIM 602]
Length = 236
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L+
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIEREKIALRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ PL+VL+QVNTSGE SKSGI+P + E + PNL GLM+I +P
Sbjct: 115 EQ-RPADMPPLQVLIQVNTSGEASKSGIEPEQLFTLAELIS-GLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
DY + F L + ++ + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQLAELQQQLAQKYPHIDT---LSMGMSGDMQAAIEAGSTIVRIGTAIFGE 229
Query: 191 REYAK 195
R+Y++
Sbjct: 230 RDYSR 234
>gi|258620724|ref|ZP_05715759.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|424810419|ref|ZP_18235771.1| hypothetical protein SX4_1006 [Vibrio mimicus SX-4]
gi|258586922|gb|EEW11636.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|342322350|gb|EGU18141.1| hypothetical protein SX4_1006 [Vibrio mimicus SX-4]
Length = 236
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ ++WHF+G LQSNK + + + D V + EKIA L+
Sbjct: 58 YVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIEREKIALRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ PL+VL+QVNTSGE SKSGI+P + E + PNL GLM+I +P
Sbjct: 115 EQ-RPADMPPLQVLIQVNTSGEASKSGIEPEQLFTLAELIS-GLPNLTLRGLMSIPENVP 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
DY + F L + ++ + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYPAQLAAFTQLAELQQQLAQKYPHIDT---LSMGMSGDMQAAIEAGSTIVRIGTAIFGE 229
Query: 191 REYAK 195
R+Y++
Sbjct: 230 RDYSR 234
>gi|440470131|gb|ELQ39217.1| hypothetical protein OOU_Y34scaffold00511g7 [Magnaporthe oryzae
Y34]
gi|440480109|gb|ELQ60804.1| hypothetical protein OOW_P131scaffold01234g15 [Magnaporthe oryzae
P131]
Length = 251
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP I+WHF+G LQS K++ +PNL V V K A LD+A G PL + VQ
Sbjct: 73 LPRSIQWHFIGGLQSTHCKSI-AKIPNLWCVSSVDTLKKAQLLDRARGQAGEPPLNIHVQ 131
Query: 89 VNTSGEESKSGIDPSS-----CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE---- 137
VNTSGEESKSG P C + CPNL GLMTIG +TPE
Sbjct: 132 VNTSGEESKSGCAPGEETIALCRAVASD---ECPNLRLLGLMTIGAIARSRATTPETENE 188
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F L R V K L + + ELSMGMS DFE AI MGS VRIGSTIFG R
Sbjct: 189 DFVCLREQRDLVAKELALEGEL-ELSMGMSDDFEGAISMGSHEVRIGSTIFGER 241
>gi|343492470|ref|ZP_08730834.1| hypothetical protein VINI7043_12901 [Vibrio nigripulchritudo ATCC
27043]
gi|342827135|gb|EGU61532.1| hypothetical protein VINI7043_12901 [Vibrio nigripulchritudo ATCC
27043]
Length = 236
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + Y+ +DI+WHF+G +QSNK + + N V V KIA L+
Sbjct: 65 KVQYFTEHYS-DKDIEWHFIGPIQSNKTRPI---AENFAWVHSVDRAKIAQRLNDQRPE- 119
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTP 136
G PL VL+QVNTSGE SKSGI+ + + PNL GLM+I + DY S
Sbjct: 120 GMAPLNVLIQVNTSGEASKSGINEEELFELAALIN-DLPNLTLKGLMSIPANVSDYDSQL 178
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
F L + K + D LSMGMSGD E A+E GST VRIG+ IFG R+Y+ K
Sbjct: 179 AAFNQLSELK---TKLANLYPDVDVLSMGMSGDMEAAVEAGSTMVRIGTAIFGARDYSNK 235
Query: 197 Q 197
Q
Sbjct: 236 Q 236
>gi|302927051|ref|XP_003054417.1| hypothetical protein NECHADRAFT_75105 [Nectria haematococca mpVI
77-13-4]
gi|256735358|gb|EEU48704.1| hypothetical protein NECHADRAFT_75105 [Nectria haematococca mpVI
77-13-4]
Length = 259
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 99/176 (56%), Gaps = 19/176 (10%)
Query: 29 LPEDIKWHFVG-HLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP---- 82
LP ++WHF+G H +S L +PNL V V K A L+ NL +P
Sbjct: 80 LPNTVQWHFIGGHCKS------LAKIPNLFCVSSVDTSKKAQLLNTTRGNLLASQPDLSK 133
Query: 83 LKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN- 138
L V VQVNTSGEE+KSG P + + + + CPNL+ GLMTIG +T EN
Sbjct: 134 LGVHVQVNTSGEEAKSGCAPGADTVALCREIVDTCPNLQLLGLMTIGAIARSKATTAENE 193
Query: 139 ---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F TL R V K LG++E+ ELSMGMS DFE A+ +GS VR+GSTIFG R
Sbjct: 194 NEDFLTLKAQRDLVAKELGLSEESLELSMGMSEDFEGAVRLGSNEVRVGSTIFGQR 249
>gi|323493580|ref|ZP_08098701.1| hypothetical protein VIBR0546_04999 [Vibrio brasiliensis LMG 20546]
gi|323312103|gb|EGA65246.1| hypothetical protein VIBR0546_04999 [Vibrio brasiliensis LMG 20546]
Length = 238
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 103/181 (56%), Gaps = 11/181 (6%)
Query: 19 KLLRFIDKYNLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K++ F + PE +++WHF+G +QSNK++ + N V V KIA L+
Sbjct: 65 KVIHFAQHH--PELNLEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAQRLNDQRPQ 119
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTST 135
G +P++VL+QVNTSGE SKSGID I E + PNL GLM+I + DY S
Sbjct: 120 -GLEPIQVLIQVNTSGESSKSGIDNEEIFAIAELIS-SLPNLTLRGLMSIPANVSDYQSQ 177
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F L + ++ + ++ LSMGMSGD + AIE GST VRIG+ IFG R+Y+
Sbjct: 178 LAAFTQLAQLKDKLAQQFP-EQNIDTLSMGMSGDMDAAIEAGSTMVRIGTAIFGARDYSN 236
Query: 196 K 196
K
Sbjct: 237 K 237
>gi|389629198|ref|XP_003712252.1| YggS family pyridoxal phosphate enzyme [Magnaporthe oryzae 70-15]
gi|351644584|gb|EHA52445.1| YggS family pyridoxal phosphate enzyme [Magnaporthe oryzae 70-15]
Length = 258
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 95/174 (54%), Gaps = 16/174 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP I+WHF+G LQS K++ +PNL V V K A LD+A G PL + VQ
Sbjct: 80 LPRSIQWHFIGGLQSTHCKSI-AKIPNLWCVSSVDTLKKAQLLDRARGQAGEPPLNIHVQ 138
Query: 89 VNTSGEESKSGIDPSS-----CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE---- 137
VNTSGEESKSG P C + CPNL GLMTIG +TPE
Sbjct: 139 VNTSGEESKSGCAPGEETIALCRAVASD---ECPNLRLLGLMTIGAIARSRATTPETENE 195
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F L R V K L + + ELSMGMS DFE AI MGS VRIGSTIFG R
Sbjct: 196 DFVCLREQRDLVAKELALEGEL-ELSMGMSDDFEGAISMGSHEVRIGSTIFGER 248
>gi|68488827|ref|XP_711760.1| hypothetical protein CaO19.10312 [Candida albicans SC5314]
gi|68488872|ref|XP_711736.1| hypothetical protein CaO19.2794 [Candida albicans SC5314]
gi|46433058|gb|EAK92514.1| hypothetical protein CaO19.2794 [Candida albicans SC5314]
gi|46433083|gb|EAK92538.1| hypothetical protein CaO19.10312 [Candida albicans SC5314]
Length = 277
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 102/180 (56%), Gaps = 15/180 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DIKWHF+G LQS KAK L V NL VE + + K LD + + V +Q
Sbjct: 103 LPNDIKWHFIGGLQSGKAKDLSKHVANLYAVETIDSLKKCKQLDNTRVKVEGDDINVFLQ 162
Query: 89 VNTSGEESKSGI----DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN------ 138
+NTSGEE KSG D S + + + C L+F GLMTIG + + + EN
Sbjct: 163 INTSGEEQKSGFQNLQDIESTVEFL--LSSDCKKLKFLGLMTIGSFNESISNENDKENQD 220
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
F+ L+ + + + ELSMGMS DF+QAI+ GSTSVR+G+TIFG R +++Q+
Sbjct: 221 FKKLVEMKQILDSKYNL---NLELSMGMSNDFQQAIKQGSTSVRVGTTIFGSRPPSQQQK 277
>gi|218778253|ref|YP_002429571.1| alanine racemase domain-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218759637|gb|ACL02103.1| alanine racemase domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 233
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 94/166 (56%), Gaps = 11/166 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++WHF+GHLQSNKAK VP ++ V + K+A +DK + G K +LVQVN
Sbjct: 74 DVEWHFIGHLQSNKAKY---AVPLFSLIHSVDSFKLAGEIDKQAAKAG-KIQDILVQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEE+KSG +V+ + N+ GLMT MP + P+ R E+ +
Sbjct: 130 SGEETKSGTADEEAATLVKEISA-LENVRVKGLMT--MPPFFDDPDRARPFFRRLRELAQ 186
Query: 152 AL---GMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
A+ G ELSMGM+GDFE AIE G+T VR+G+ IFG R Y
Sbjct: 187 AIQNKGFKNVSMEELSMGMTGDFEAAIEEGATLVRVGTAIFGARNY 232
>gi|238878824|gb|EEQ42462.1| hypothetical protein CAWG_00673 [Candida albicans WO-1]
Length = 277
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 101/180 (56%), Gaps = 15/180 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DIKWHF+G LQS KAK L V NL VE + + K LD + + V +Q
Sbjct: 103 LPNDIKWHFIGGLQSGKAKDLSKHVANLYAVETIDSLKKCKQLDNTRVKVEGDDINVFLQ 162
Query: 89 VNTSGEESKSGI----DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN------ 138
+NTSGEE KSG D S + + + C L+F GLMTIG + + + EN
Sbjct: 163 INTSGEEQKSGFQNLQDIESTVEFL--LSSDCKKLKFLGLMTIGSFNESISNENDKENQD 220
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
F+ L+ + + + ELSMGMS DF+QAI+ GSTSVR+G+TIFG R ++Q+
Sbjct: 221 FKKLVEMKQILDSKYNL---NLELSMGMSNDFQQAIKQGSTSVRVGTTIFGSRPPRQQQK 277
>gi|334147087|ref|YP_004510016.1| hypothetical protein PGTDC60_1295 [Porphyromonas gingivalis TDC60]
gi|333804243|dbj|BAK25450.1| hypothetical protein PGTDC60_1295 [Porphyromonas gingivalis TDC60]
Length = 224
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 104/172 (60%), Gaps = 13/172 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
+P+D++WHF+G LQ+NK K + VP + M++ V + K+ + + + S +GR + VL++
Sbjct: 59 MPDDVEWHFIGPLQTNKVKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPN--LEFSGLMTIGMPDYTSTPEN----FRTL 142
V+ + E++KSG P ++E V R + ++ +GLM GM + E FR L
Sbjct: 115 VHIASEDTKSGFTPEELPQVLEAVLARGSDTGVKIAGLM--GMATFADDREQIRREFRRL 172
Query: 143 LNCRAEVC-KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ E+ + + D CELSMGMSGDFE AIE GST VRIG+TIFG R Y
Sbjct: 173 ASLFREMKERFFSDSADFCELSMGMSGDFEPAIEEGSTIVRIGTTIFGERRY 224
>gi|323452956|gb|EGB08829.1| hypothetical protein AURANDRAFT_14200, partial [Aureococcus
anophagefferens]
Length = 213
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL--GRKPLKVLVQ 88
E +KWHF+G LQSNK + L G V L+ V V +EK+ LD A L G PLKV VQ
Sbjct: 48 EHLKWHFIGRLQSNKVRQLCG-VKRLEAVHTVSSEKLVAKLDGAWPELQPGAGPLKVFVQ 106
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM---PDYTSTPENFRTLLNC 145
VNTSGEE+K G +P+ + + NL+ GLM IG + ++P +F L +C
Sbjct: 107 VNTSGEEAKGGCEPADAPALAKLAAAAP-NLQLEGLMCIGKYSGAEGDASP-DFVCLRDC 164
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ALG+ LSMGMS DFE AIE +T VR+GSTIFG R
Sbjct: 165 RDAAAAALGVEPASLGLSMGMSHDFETAIEHDATHVRVGSTIFGAR 210
>gi|241949269|ref|XP_002417357.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640695|emb|CAX45006.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 246
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 99/172 (57%), Gaps = 14/172 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKPLKVLV 87
LP DIKWHF+G LQS KAK L V NL VE + + K LD + + G + V +
Sbjct: 74 LPPDIKWHFIGGLQSGKAKDLSKHVKNLYAVETIDSLKKCKQLDNTRNKIDGSDDINVFL 133
Query: 88 QVNTSGEESKSGI----DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NF 139
QVNTSGEE KSG D S + + + C L+F GLMTIG + + + E +F
Sbjct: 134 QVNTSGEEQKSGFQNLQDIESTVEFL--LSSDCKKLKFLGLMTIGSFNESISNEGENQDF 191
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ L+ + + + ELSMGMS DFEQAI+ GSTSVR+G+TIFG R
Sbjct: 192 KKLVEMKQILDSKYNL---NLELSMGMSSDFEQAIKQGSTSVRVGTTIFGSR 240
>gi|85077550|ref|XP_956018.1| hypothetical protein NCU03579 [Neurospora crassa OR74A]
gi|28881125|emb|CAD70296.1| conserved hypothetical protein [Neurospora crassa]
gi|28917059|gb|EAA26782.1| hypothetical protein NCU03579 [Neurospora crassa OR74A]
Length = 262
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 97/175 (55%), Gaps = 13/175 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-----VSNLGRKPL 83
LP I+WHF+G LQ+ K+L +PNL V + K A L++ S+ L
Sbjct: 79 LPRSIQWHFIGGLQTTHCKSL-ARIPNLWAVSSLDTLKKAQTLNRVRGEVISSDPSIPKL 137
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN-- 138
V VQVNTSGEESKSG P + + + + CP+L GLMTIG +TPEN
Sbjct: 138 NVHVQVNTSGEESKSGCSPGQETVDLCKAIVTECPHLNLLGLMTIGAIARSKATTPENEN 197
Query: 139 --FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R V K LG+ + ELSMGMS DFE AI MGS VR+GSTIFG R
Sbjct: 198 EDFVVLREQRDLVEKELGLDKGSLELSMGMSEDFEGAIAMGSGEVRVGSTIFGER 252
>gi|197119080|ref|YP_002139507.1| pyridoxal phosphate-dependent enzyme, class III [Geobacter
bemidjiensis Bem]
gi|197088440|gb|ACH39711.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
bemidjiensis Bem]
Length = 230
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
K LP +I WHF+G+LQSNK + + G V D++ V +A +D+ LG K +V
Sbjct: 65 KGELPPEISWHFIGNLQSNKVRQIAGMV---DLIHSVDRLSLAAEIDRQWGALG-KVCEV 120
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
L+QVN S EE+K G +V V + NL GLMT MP + PE R
Sbjct: 121 LIQVNISQEETKGGTSSDELFQLVRDV-AKLSNLRVVGLMT--MPPFFDDPEGARPYFRE 177
Query: 146 RAEVCKALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ + L A ELSMGMSGDFE AIE G+T VR+GS +FG REY
Sbjct: 178 LRELARKLEAAAIPGVSMLELSMGMSGDFEAAIEEGATLVRVGSALFGEREY 229
>gi|393221544|gb|EJD07029.1| hypothetical protein FOMMEDRAFT_76910 [Fomitiporia mediterranea
MF3/22]
Length = 286
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 110/199 (55%), Gaps = 31/199 (15%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGR 80
+DK LP+DI+WHF+G Q+NK+K +L G+PNL ++ + + K A+ L++A+ +
Sbjct: 83 LVDKAKQLPQDIRWHFIGGFQTNKSK-VLAGIPNLYALQTLASIKAADSLNRALPAERES 141
Query: 81 KPLKVLVQVNTSGEESKSGIDP---------------SSCLGIVEHVRLRCPNLEFSGLM 125
PL VL+QVNTSGE+ KSG+ P SS + HV CP L GLM
Sbjct: 142 SPLNVLLQVNTSGEDIKSGLPPLLDSGSDTKDEAMERSSLFDLAIHVLENCPRLYLQGLM 201
Query: 126 TIGM--PDYTSTPEN--FRTLLNCRAEVCKAL------GMAEDQCE---LSMGMSGDFEQ 172
TIG + T EN F TL+ R + + L G ++ LSMGMS DFE
Sbjct: 202 TIGSLSESLSDTDENRDFETLVQTRNRLEEMLRKRYPDGSKWNENRKLLLSMGMSSDFEA 261
Query: 173 AIEMGSTSVRIGSTIFGPR 191
AI+ GS VR+G+ IFG R
Sbjct: 262 AIKAGSDIVRVGTGIFGQR 280
>gi|336468993|gb|EGO57156.1| hypothetical protein NEUTE1DRAFT_147592 [Neurospora tetrasperma
FGSC 2508]
gi|350288700|gb|EGZ69925.1| hypothetical protein NEUTE2DRAFT_158514 [Neurospora tetrasperma
FGSC 2509]
Length = 262
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 97/175 (55%), Gaps = 13/175 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-----VSNLGRKPL 83
LP I+WHF+G LQ+ K+L +PNL V + K A L++ S+ L
Sbjct: 79 LPRSIQWHFIGGLQTTHCKSL-ARIPNLWAVSSLDTLKKARTLNRVRGEVISSDPSIPKL 137
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN-- 138
V VQVNTSGEESKSG P + + + + CP+L GLMTIG +TPEN
Sbjct: 138 NVHVQVNTSGEESKSGCSPGQETVDLCKAIVTECPHLNLLGLMTIGAIARSKATTPENEN 197
Query: 139 --FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R V K LG+ + ELSMGMS DFE AI MGS VR+GSTIFG R
Sbjct: 198 EDFVVLREQRDLVEKELGLDKGSLELSMGMSEDFEGAIAMGSGEVRVGSTIFGER 252
>gi|110596798|ref|ZP_01385088.1| Protein of unknown function UPF0001 [Chlorobium ferrooxidans DSM
13031]
gi|110341485|gb|EAT59945.1| Protein of unknown function UPF0001 [Chlorobium ferrooxidans DSM
13031]
Length = 229
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 23 FIDKYNLP----EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
F++K P I WHF+GHLQSNK ++++ V +V G+ A L K
Sbjct: 62 FLEKSGDPILENSPIVWHFIGHLQSNKVRSIIDKV---TLVHGIDKLSTAEELSKRAQQH 118
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ + L++VNTSGE SK G+ P L E + + PN+ GLMTI PD S
Sbjct: 119 NLQ-IDYLLEVNTSGESSKYGMPPDKLLSTAESL-FKLPNITLRGLMTIASPDIESARRE 176
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
FRTL + K + ELSMGMSGDFE AI G+T +R+GS+IFG R
Sbjct: 177 FRTLRLLLESLKKIAPHPQKLTELSMGMSGDFEAAINEGATMIRVGSSIFGWR 229
>gi|383310794|ref|YP_005363604.1| YggS family pyridoxal phosphate enzyme [Pasteurella multocida
subsp. multocida str. HN06]
gi|380872066|gb|AFF24433.1| YggS family pyridoxal phosphate enzyme [Pasteurella multocida
subsp. multocida str. HN06]
Length = 233
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ K N+P ++WHF+G LQSNK K + + D ++ + +KIAN L+
Sbjct: 57 YVQEGVEKIQYFAKKNIP--LEWHFIGPLQSNKTKLV---AEHFDWLQTLDRKKIANRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 112 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPSD 169
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 DLATQTQAFTQMYSLFEQLKQALPDAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
R+Y+K
Sbjct: 229 RDYSK 233
>gi|254230227|ref|ZP_04923619.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393230|ref|YP_003285084.1| hypothetical protein VEA_002457 [Vibrio sp. Ex25]
gi|151937259|gb|EDN56125.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262336824|gb|ACY50619.1| hypothetical protein VEA_002457 [Vibrio sp. Ex25]
Length = 233
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGE SKSG+ + + E + R PNL GLM+I + DY S
Sbjct: 120 EL--KPLQVLIQVNTSGEASKSGVTEAEVFELAELIS-RLPNLTLRGLMSIPANVSDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + + + LSMGMSGD AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLHEFQKLATLKQTLEAQFPEIDT---LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYS 233
>gi|261187897|ref|XP_002620366.1| alanine racemase [Ajellomyces dermatitidis SLH14081]
gi|239593483|gb|EEQ76064.1| alanine racemase [Ajellomyces dermatitidis SLH14081]
gi|239608462|gb|EEQ85449.1| alanine racemase [Ajellomyces dermatitidis ER-3]
gi|327356074|gb|EGE84931.1| alanine racemase [Ajellomyces dermatitidis ATCC 18188]
Length = 297
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 97/184 (52%), Gaps = 21/184 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA----------VSNL 78
L +++WHF+G LQSNK +L VP L VE V EK AN L++
Sbjct: 100 LSPEVRWHFIGGLQSNKCVSLARDVPGLFAVESVDTEKKANLLNRGWGERLAAAGDADAD 159
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP-- 136
L+V VQVNTSGE +KSG++P + H+R CP L+ GLMTIG +
Sbjct: 160 AENRLRVYVQVNTSGEANKSGVEPVEATRLCRHIRENCPRLKLVGLMTIGALARSQATTL 219
Query: 137 ----ENFRTLLNCRAEVCKAL-----GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
E+F L R V K L + ELSMGM+ D+E AI+MGS VR+G+ I
Sbjct: 220 ENENEDFLCLRETRDRVEKELGLAGEDGEGEGLELSMGMTQDYEGAIKMGSDQVRVGAEI 279
Query: 188 FGPR 191
FGPR
Sbjct: 280 FGPR 283
>gi|433658688|ref|YP_007276067.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like protein PROSC [Vibrio parahaemolyticus
BB22OP]
gi|432509376|gb|AGB10893.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like protein PROSC [Vibrio parahaemolyticus
BB22OP]
Length = 237
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 15/184 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L++
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRAKIAQRLNEQRPQ 119
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTST 135
KPL+VL+QVNTSGE+SKSG+ + + E + R PNL GLM+I + DY +
Sbjct: 120 -ELKPLQVLIQVNTSGEDSKSGVSDAEIFELAELIS-RLPNLTLRGLMSIPANVSDYDAQ 177
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F L A + +AL + + LSMGMSGD AIE GST VRIG+ IFG R+Y+
Sbjct: 178 LREFEKL----ATLKQALEQQYPEIDTLSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYS 233
Query: 195 KKQQ 198
K +
Sbjct: 234 TKSE 237
>gi|1730919|sp|P52055.1|YPI1_VIBAL RecName: Full=UPF0001 protein in pilT-proC intergenic region;
AltName: Full=ORF1
gi|801880|dbj|BAA09062.1| FkuA [Vibrio alginolyticus]
Length = 233
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGE SKSG+ + + E + R PNL GLM+I + DY S
Sbjct: 120 EL--KPLQVLIQVNTSGEASKSGVTEAEVFELAELIS-RLPNLTLRGLMSIPANVSDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + + + LSMGMSGD AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLHEFQKLATLKQTLEAQFPEIDT---LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYS 233
>gi|269965745|ref|ZP_06179842.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269829613|gb|EEZ83850.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 233
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGE SKSG+ + + E + R PNL GLM+I + DY S
Sbjct: 120 EL--KPLQVLIQVNTSGEASKSGVTEAEVFELAELIS-RLPNLTLRGLMSIPANVSDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + + + LSMGMSGD AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLREFQKLATLKQTLEAQFPEIDT---LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYS 233
>gi|254508623|ref|ZP_05120739.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
16]
gi|219548474|gb|EED25483.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
16]
Length = 237
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 97/166 (58%), Gaps = 10/166 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+G +QSNK++ + N V V KIA L+ G PL+VL+QVNTS
Sbjct: 78 LEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAQRLNDQ-RPAGMPPLQVLMQVNTS 133
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEVC 150
GE SKSG++ + + E + PNL GLM+I + DY S F+ L + +
Sbjct: 134 GEASKSGLNENEIFALAELIS-SLPNLTLRGLMSIPANVSDYASQLSAFKQLAELKDALV 192
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
K ++Q + LSMGMSGD E AIE GST VRIG+ IFG R+Y+K
Sbjct: 193 KRF--PDEQLDTLSMGMSGDMEAAIEAGSTMVRIGTAIFGARDYSK 236
>gi|413920500|gb|AFW60432.1| hypothetical protein ZEAMMB73_612001 [Zea mays]
Length = 503
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%)
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGM 155
+K G+DPS C+ + +HVRL PNL SGLM IGM DY+STP+NF+ L NC EVCK LG+
Sbjct: 281 AKIGVDPSGCVELAKHVRLNSPNLVLSGLMIIGMLDYSSTPKNFKALANCWEEVCKELGI 340
Query: 156 AEDQCELSMGMSGDFEQAIEMGSTSVR 182
+E+Q EL +GMS DFEQAIEMGST+ R
Sbjct: 341 SEEQGELFVGMSSDFEQAIEMGSTNQR 367
>gi|253745137|gb|EET01241.1| PLP dependent enzymes class III [Giardia intestinalis ATCC 50581]
Length = 220
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 108/169 (63%), Gaps = 9/169 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
++ DI+WHF+GHLQ+NK + + +PN +++ V ++++A L+ A + L+V++
Sbjct: 60 DVASDIEWHFIGHLQTNKVRDV-ALIPNC-VIQTVDSDRLARRLNDARPD-NLDLLRVMI 116
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE-NFRTLLNCR 146
Q+NTSGE +KSG + + + + + P L GLMTIG P +PE +FR L++ R
Sbjct: 117 QINTSGESTKSGCTAEDAIELAQTI-MTLPRLRLIGLMTIGAP---GSPEASFRALVDAR 172
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ + + E++ +LSMGMS D++ A++MG+ VRIG+ IFG R Y++
Sbjct: 173 NAIEQVVK-PEERLKLSMGMSTDYQLAVQMGADYVRIGTAIFGERVYSQ 220
>gi|451972140|ref|ZP_21925352.1| hypothetical protein C408_1964 [Vibrio alginolyticus E0666]
gi|451931978|gb|EMD79660.1| hypothetical protein C408_1964 [Vibrio alginolyticus E0666]
Length = 233
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 13/179 (7%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L+ N
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQRPN 119
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTST 135
KPL+VL+QVNTSGE SKSG+ + + E + R PNL GLM+I + DY S
Sbjct: 120 -ELKPLQVLIQVNTSGETSKSGVTEAEVFELAELIS-RLPNLTLRGLMSIPANVSDYESQ 177
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + + + LSMGMSGD AIE GST VRIG+ IFG R+Y+
Sbjct: 178 LHEFQKLATLKQTLEAQFPEIDT---LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYS 233
>gi|91228687|ref|ZP_01262601.1| FkuA [Vibrio alginolyticus 12G01]
gi|91187758|gb|EAS74076.1| FkuA [Vibrio alginolyticus 12G01]
Length = 233
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L D+ S
Sbjct: 65 KVQHFSEHY--PDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQRPS 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTS 134
L KPL+VL+QVNTSGE SKSG+ + + E + R PNL GLM+I + DY S
Sbjct: 120 EL--KPLQVLIQVNTSGEASKSGVTEAEVFELAELIS-RLPNLTLRGLMSIPANVSDYES 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + + + LSMGMSGD AIE GST VRIG+ IFG R+Y+
Sbjct: 177 QLREFQKLATLKQTLEAQFPEIDT---LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYS 233
>gi|115385721|ref|XP_001209407.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114187854|gb|EAU29554.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 301
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 94/165 (56%), Gaps = 17/165 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV--------SNLGR 80
LP I+WHF+G LQSNK TL V L VE V +EK A+ LDK ++
Sbjct: 77 LPASIRWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASLLDKGWGERSAELRASDAE 136
Query: 81 KPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPE 137
L+V VQVNTSGEE+KSG+DP + + +R +CP L G+MTIG +TPE
Sbjct: 137 DRLRVFVQVNTSGEENKSGVDPGDGAVALCRFIRDKCPRLRLQGVMTIGAIARSKATTPE 196
Query: 138 N----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGS 178
N F L + R V K LG+ + ELSMGMS DFE AI +GS
Sbjct: 197 NENEDFLCLRDTRDRVVKELGL--EGLELSMGMSEDFEGAIALGS 239
>gi|322699267|gb|EFY91030.1| alanine racemase family protein (ISS) [Metarhizium acridum CQMa
102]
Length = 287
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 96/175 (54%), Gaps = 13/175 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-----VSNLGRKPL 83
LP+ ++WHF+G LQS KTL +PNL V V K AN L+ A S+ L
Sbjct: 104 LPKTVQWHFIGGLQSGHCKTL-AKIPNLFCVSSVDTLKKANLLNTARGALLASDPSLPKL 162
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN-- 138
V VQVNTSGEE+KSG P + + + CPNL GLMTIG +T EN
Sbjct: 163 SVHVQVNTSGEEAKSGCAPGKETVALCREIIGNCPNLHLLGLMTIGAIARSKATTAENEN 222
Query: 139 --FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R V + L + + ELSMGMS DFE A+ +GS VR+GSTIFG R
Sbjct: 223 EDFIALKEQRDLVARELALDHGRLELSMGMSEDFEGAVVLGSGEVRVGSTIFGTR 277
>gi|343514970|ref|ZP_08752034.1| hypothetical protein VIBRN418_11370 [Vibrio sp. N418]
gi|342799114|gb|EGU34694.1| hypothetical protein VIBRN418_11370 [Vibrio sp. N418]
Length = 238
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 98/170 (57%), Gaps = 16/170 (9%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
I+WHF+G +QSNK + + + V V KIA L D+ S++ PL+VL+QVNT
Sbjct: 78 IEWHFIGPIQSNKTRPV---AEHFAWVHTVDRAKIAQRLNDQRPSDM--PPLQVLIQVNT 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEV 149
SGE+SKSGI+ + + PNL GLM+I +PDYTS F+ L +
Sbjct: 133 SGEDSKSGIEEHQVFELAALIST-LPNLTLRGLMSIPANVPDYTSQLRAFKQLTALK--- 188
Query: 150 CKALGMAEDQCEL---SMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+AL +L SMGMSGD E AIE GST VRIG+ IFG R+Y+ K
Sbjct: 189 -QALAERHPNLKLDTLSMGMSGDMEAAIEAGSTMVRIGTAIFGERDYSTK 237
>gi|28899390|ref|NP_798995.1| FkuA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839183|ref|ZP_01991850.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260366261|ref|ZP_05778720.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
K5030]
gi|260878922|ref|ZP_05891277.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AN-5034]
gi|260898277|ref|ZP_05906773.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
Peru-466]
gi|260903381|ref|ZP_05911776.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AQ4037]
gi|417318890|ref|ZP_12105448.1| FkuA protein [Vibrio parahaemolyticus 10329]
gi|28807626|dbj|BAC60879.1| FkuA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747285|gb|EDM58269.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308085861|gb|EFO35556.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
Peru-466]
gi|308090493|gb|EFO40188.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AN-5034]
gi|308107474|gb|EFO45014.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AQ4037]
gi|308113535|gb|EFO51075.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
K5030]
gi|328474080|gb|EGF44885.1| FkuA protein [Vibrio parahaemolyticus 10329]
Length = 237
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 13/183 (7%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ F + Y P++ I+WHF+G +QSNK++ + + D V + KIA L++
Sbjct: 65 KVQHFAEHY--PDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRAKIAQRLNEQRPQ 119
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTST 135
KPL+VL+QVNTSGE+SKSG+ + + E + R PNL GLM+I + DY +
Sbjct: 120 -ELKPLQVLIQVNTSGEDSKSGVSDAEIFELAELIS-RLPNLTLRGLMSIPANVSDYDAQ 177
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F L + + + + LSMGMSGD AIE GST VRIG+ IFG R+Y+
Sbjct: 178 LREFEKLATLKQTLEQQYPEIDT---LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYST 234
Query: 196 KQQ 198
K +
Sbjct: 235 KSE 237
>gi|365876496|ref|ZP_09416017.1| hypothetical protein EAAG1_09587 [Elizabethkingia anophelis Ag1]
gi|442586515|ref|ZP_21005343.1| putative enzyme with a TIM-barrel fold protein [Elizabethkingia
anophelis R26]
gi|365755808|gb|EHM97726.1| hypothetical protein EAAG1_09587 [Elizabethkingia anophelis Ag1]
gi|442563739|gb|ELR80946.1| putative enzyme with a TIM-barrel fold protein [Elizabethkingia
anophelis R26]
Length = 219
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 7/167 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WH +GHLQSNK K + V D +E V +EK+ ++K + RK +KVL+Q
Sbjct: 58 LPNDIQWHLIGHLQSNKVKYVAEFV---DTIESVDSEKLLEEINKQAAKHNRK-IKVLLQ 113
Query: 89 VNTSGEESKSGIDPSSCLGIVE-HVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
V + E+SK+G++ S + + +++ N+E +GLM IG +T E +
Sbjct: 114 VKIAEEDSKTGMEVSETKELFQKYLQGHFENIEITGLMGIGT--FTDDTEQTKREFLFLK 171
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ L + LSMGMSGD++ AIE GSTSVRIGS+IFG R+Y+
Sbjct: 172 RLFDQLSAQKKLETLSMGMSGDYQLAIECGSTSVRIGSSIFGARDYS 218
>gi|367034574|ref|XP_003666569.1| hypothetical protein MYCTH_2311371 [Myceliophthora thermophila ATCC
42464]
gi|347013842|gb|AEO61324.1| hypothetical protein MYCTH_2311371 [Myceliophthora thermophila ATCC
42464]
Length = 261
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 101/179 (56%), Gaps = 22/179 (12%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGRKP----L 83
LP I+WHF+G LQS + K L +PNL V V N K A LDK + +P L
Sbjct: 78 LPRSIQWHFIGGLQSGRCKEL-AKIPNLWCVSSVDNVKKAQLLDKYRGEKIKAEPETPKL 136
Query: 84 KVLVQVNTSGEESKSGIDP-----SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTP 136
V VQVNTSGEESKSG P S C IV CPNL GLMTIG +T
Sbjct: 137 NVHVQVNTSGEESKSGCAPGEDVVSLCRAIVND----CPNLHLLGLMTIGAIARSVATTA 192
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
EN FR L+ R V K LG+ + ELSMGMS DFE AI MGS+ VRIGSTIFG R
Sbjct: 193 ENENEDFRLLVEQRDLVAKELGLEREL-ELSMGMSEDFEGAIVMGSSEVRIGSTIFGQR 250
>gi|94265278|ref|ZP_01289036.1| Protein of unknown function UPF0001 [delta proteobacterium MLMS-1]
gi|93454212|gb|EAT04530.1| Protein of unknown function UPF0001 [delta proteobacterium MLMS-1]
Length = 232
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ WHF+GHLQSNKAK MVE V K+A+ L + GR L VLVQVN +
Sbjct: 75 LHWHFIGHLQSNKAKA---AATRFAMVESVDRLKLADRLAHHAAAAGRL-LPVLVQVNIA 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKA 152
GE K+G+ P+ +++ + + P L GLMT MP + ST E R ++ A
Sbjct: 131 GEARKAGVAPAETRALLQELD-KLPALRVMGLMT--MPPWASTAEASRGHFRQLRQLADA 187
Query: 153 LGMA-----EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ A ELSMGMSGDFE A+E G+T VR+G+ IFG R+
Sbjct: 188 MAEAGLLGRHGPVELSMGMSGDFEVAVEEGATLVRVGTAIFGARD 232
>gi|417949356|ref|ZP_12592492.1| hypothetical protein VISP3789_20470 [Vibrio splendidus ATCC 33789]
gi|342808314|gb|EGU43474.1| hypothetical protein VISP3789_20470 [Vibrio splendidus ATCC 33789]
Length = 234
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+++WHF+G +QSNK + + + V + +KIA L D+ S L PL+VL+QVN
Sbjct: 77 NLEWHFIGPIQSNKTRPI---AESFAWVHSIDRDKIAQRLNDQRPSEL--PPLQVLIQVN 131
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAE 148
TSGE SKSG S + E + PNL GLM+I + DY S F L + +
Sbjct: 132 TSGEASKSGTSEESVFALAELIS-SLPNLTLRGLMSIPANVSDYQSQLSAFSQLAELKDK 190
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ D LSMGMSGD E AIE GST VRIG+ IFG R+YAK
Sbjct: 191 LAAKY---PDIDTLSMGMSGDMEAAIEAGSTMVRIGTAIFGARDYAK 234
>gi|260773602|ref|ZP_05882518.1| hypothetical protein VIB_002076 [Vibrio metschnikovii CIP 69.14]
gi|260612741|gb|EEX37944.1| hypothetical protein VIB_002076 [Vibrio metschnikovii CIP 69.14]
Length = 238
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 10/183 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ +++ D++WHF+G LQSNK + + + D + + KIA L
Sbjct: 58 YVQEGVNKIRYFAEHHPQLDLEWHFIGPLQSNKTRLI---AEHFDWMHTLDRAKIAQRLS 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMP 130
+ + PL+VL+QVNTSGE SKSGI + + E + PNL GLM+I +
Sbjct: 115 EQ-RPAHKAPLQVLIQVNTSGETSKSGISEQALFPLAELIS-ELPNLTLRGLMSIPENVA 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
DY F+ L + +A + + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 173 DYAEQLVAFQRLADLQARLTERYPALDT---LSMGMSGDMQAAIEAGSTMVRIGTAIFGQ 229
Query: 191 REY 193
R+Y
Sbjct: 230 RDY 232
>gi|343510792|ref|ZP_08747999.1| hypothetical protein VIS19158_11194 [Vibrio scophthalmi LMG 19158]
gi|342800859|gb|EGU36365.1| hypothetical protein VIS19158_11194 [Vibrio scophthalmi LMG 19158]
Length = 238
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 98/170 (57%), Gaps = 16/170 (9%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
I+WHF+G +QSNK + + + V V KIA L D+ S++ PL+VL+QVNT
Sbjct: 78 IEWHFIGPIQSNKTRPV---AEHFAWVHTVDRAKIAQRLNDQRPSDM--PPLQVLIQVNT 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEV 149
SGE+SKSGI+ + + PNL GLM+I +PDY S F+ L E+
Sbjct: 133 SGEDSKSGIEEHQVFELATLIST-LPNLTLRGLMSIPANVPDYASQLRAFKQL----TEL 187
Query: 150 CKALGMAEDQCEL---SMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+AL +L SMGMSGD E AIE GST VRIG+ IFG R+Y+ K
Sbjct: 188 KQALAERHPNLKLDTLSMGMSGDMEAAIEAGSTMVRIGTAIFGERDYSTK 237
>gi|375266703|ref|YP_005024146.1| FkuA protein [Vibrio sp. EJY3]
gi|369842023|gb|AEX23167.1| FkuA protein [Vibrio sp. EJY3]
Length = 236
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ F Y P++ I+WHF+G +QSNK++ + + D V + KIA L+ N
Sbjct: 65 KVQHFAQHY--PDNCIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRAKIAQRLNDQRPN 119
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTST 135
+PL+VL+QVNTSGE+SKSG+ + + E + R PNL GLM+I + DY +
Sbjct: 120 -ELEPLQVLIQVNTSGEDSKSGVTDAEIFELAELIS-RLPNLTLRGLMSIPANVSDYDAQ 177
Query: 136 PENFRTLLNCRAEVCKALGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L A + +AL D LSMGMSGD AIE GST VRIG+ IFG R+Y
Sbjct: 178 LHEFQKL----AALKQALQQQYPDIDTLSMGMSGDMTAAIEAGSTMVRIGTAIFGARDYN 233
Query: 195 KKQ 197
K+
Sbjct: 234 SKK 236
>gi|375132071|ref|YP_004994171.1| hypothetical protein [Vibrio furnissii NCTC 11218]
gi|315181245|gb|ADT88159.1| hypothetical protein vfu_A03051 [Vibrio furnissii NCTC 11218]
Length = 235
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 12/178 (6%)
Query: 21 LRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLG 79
++F +++ D++WHF+G LQSNK + + + D + + KIA L ++ ++L
Sbjct: 66 VQFFAEHHPELDLEWHFIGPLQSNKTRLI---AEHFDWMHTIDRAKIAQRLSEQRPAHL- 121
Query: 80 RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPE 137
PL+VL+QVNTSGE SKSG+ + + E + PNL GLM+I +PDY S
Sbjct: 122 -PPLQVLIQVNTSGEASKSGVSENDLFTLAELIS-GLPNLTLRGLMSIPENVPDYASQLA 179
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
FR L + ++ + + LSMGMSGD AIE GST VRIG+ IFG R+Y +
Sbjct: 180 AFRQLAALKDQLAEKYDGIDT---LSMGMSGDMAAAIEAGSTIVRIGTAIFGQRDYPR 234
>gi|417853470|ref|ZP_12498847.1| hypothetical protein AAUPMG_00684 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338219466|gb|EGP05119.1| hypothetical protein AAUPMG_00684 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 233
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 57 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 112 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPSD 169
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 DLATQTQAFTQMYSLFEQLKQALPDAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
R+Y+K
Sbjct: 229 RDYSK 233
>gi|194334464|ref|YP_002016324.1| alanine racemase domain-containing protein [Prosthecochloris
aestuarii DSM 271]
gi|194312282|gb|ACF46677.1| alanine racemase domain protein [Prosthecochloris aestuarii DSM
271]
Length = 229
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 95/175 (54%), Gaps = 13/175 (7%)
Query: 23 FIDKYNLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--AVS 76
F++K PE ++WHF+GHLQSNK K + V + MV + A L K A
Sbjct: 62 FLEKTASPELEGLPVRWHFIGHLQSNKIKYI---VDKVYMVHSIDKLSTARELSKRAAAK 118
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
NL + L++VNTSGE SK G+ P L P++ GLMTI PD +
Sbjct: 119 NLT---VDYLIEVNTSGEPSKFGLSPEELLKTAGSF-FDLPSVTLRGLMTIASPDPSLAH 174
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E F+ L N ++ E+ ELSMGMSGDFE+AI+ G+T VRIG+ +FG R
Sbjct: 175 EEFKLLANLLEQLRAKAPHPENITELSMGMSGDFEKAIDAGATMVRIGTALFGRR 229
>gi|71015126|ref|XP_758778.1| hypothetical protein UM02631.1 [Ustilago maydis 521]
gi|46098568|gb|EAK83801.1| hypothetical protein UM02631.1 [Ustilago maydis 521]
Length = 954
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 113/230 (49%), Gaps = 56/230 (24%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR- 80
+DK LP +I+WHFVG LQSNK K LL +PNL ++E + + K AN L KA+++
Sbjct: 251 MVDKAKVLPREIRWHFVGGLQSNKGK-LLASIPNLYLLETLDSVKAANVLQKALASPDAA 309
Query: 81 ---KPLKVLVQVNTSGEESKSGIDP-----------SSCLGIVEHVRLRCPNLEFSGLMT 126
+PL+V +QVNTSGEE+KSG+ P S L + HV +CPNL G+MT
Sbjct: 310 KRDEPLRVYLQVNTSGEEAKSGLAPILAVDAEQARESDLLQLAVHVITKCPNLRLRGVMT 369
Query: 127 IG---------------MPDYTSTPENFRTLLNCRAEVCKALGMAED------------- 158
IG + + S +F L+ RA + + L +E
Sbjct: 370 IGAAANSSSADAEAAKSVDEIVSANPDFERLIQTRANLVQLLRKSEKVQTADASHIKEAY 429
Query: 159 -----------QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
ELSMGMS D + A GS +VR+G+ FG R +++
Sbjct: 430 SELLDGSDAHGGLELSMGMSADMDVATMAGSDNVRVGTDCFGRRPATREE 479
>gi|148980488|ref|ZP_01816085.1| Predicted enzyme with a TIM-barrel fold protein [Vibrionales
bacterium SWAT-3]
gi|145961213|gb|EDK26527.1| Predicted enzyme with a TIM-barrel fold protein [Vibrionales
bacterium SWAT-3]
Length = 234
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+++WHF+G +QSNK + + + V V +KIA L D+ S L PL+VL+QVN
Sbjct: 77 NLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLNDQRPSEL--PPLQVLIQVN 131
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAE 148
TSGE SKSG S + E + PNL GLM+I + DY S F L + +
Sbjct: 132 TSGEASKSGTSEESVFALAELIS-SLPNLTLRGLMSIPANVSDYQSQLNAFSQLAELKDK 190
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ D LSMGMSGD + A+E GST VRIG+ IFG R+YAK
Sbjct: 191 LAAKY---PDIDTLSMGMSGDMDAAVEAGSTMVRIGTAIFGARDYAK 234
>gi|440749641|ref|ZP_20928887.1| Putative protein YggS [Mariniradius saccharolyticus AK6]
gi|436481927|gb|ELP38073.1| Putative protein YggS [Mariniradius saccharolyticus AK6]
Length = 226
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WHF+GHLQ+NK K + P + ++ GV + K+ +DK GR + L+Q
Sbjct: 59 LPADIRWHFIGHLQTNKVKYI---APFVHLIHGVDSWKLLLEIDKQAEKSGR-VVSCLLQ 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTPENFRT---LLN 144
++ + EE+K G+D L I+++ L+ N+ GLM GM +T RT L
Sbjct: 115 IHIAQEETKFGLDREELLAILQNPELQHLKNVRIIGLM--GMASFTEYIHQIRTEFRFLK 172
Query: 145 CRAEVCKALGMAED--QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ CK+L + E+ ELSMGMSGD+ A E GST VRIG+ IFG R Y K+
Sbjct: 173 NLFDECKSLQLPENVQLSELSMGMSGDYLIAQEEGSTMVRIGTAIFGERNYTKQ 226
>gi|258654347|ref|YP_003203503.1| alanine racemase domain-containing protein [Nakamurella
multipartita DSM 44233]
gi|258557572|gb|ACV80514.1| alanine racemase domain protein [Nakamurella multipartita DSM
44233]
Length = 249
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 36 HFVGHLQSNKAKTLLGGVP---NLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
HF+GHLQSNK LL + LD V+ +G ++ + L+ A NL V +QVN S
Sbjct: 93 HFIGHLQSNKVNQLLPHIQCLQTLDSVDLIG--RLQSRLESAARNL-----DVFIQVNVS 145
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
GE++KSGI P+ +VE V P L G MTIG+ PD + +R L R
Sbjct: 146 GEQTKSGIAPADAREMVEAVAA-APRLRLRGFMTIGLNSPDRDAIRRGYRALATIRDRAA 204
Query: 151 -KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ A+D ELSMGMSGDF AI G+T VR+GS +FGPR
Sbjct: 205 DEQWPGAQDAVELSMGMSGDFADAIAEGATIVRLGSAVFGPR 246
>gi|94268049|ref|ZP_01291070.1| Protein of unknown function UPF0001 [delta proteobacterium MLMS-1]
gi|93451754|gb|EAT02518.1| Protein of unknown function UPF0001 [delta proteobacterium MLMS-1]
Length = 232
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ WHF+GHLQSNKAK + MVE V K+A L + GR L VLVQVN +
Sbjct: 75 LHWHFIGHLQSNKAKA---AATHFAMVESVDRLKLAGRLAHYAAAAGRL-LPVLVQVNIA 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKA 152
GE K+G+ P+ +++ + + P L GLMT MP + ST E R ++ A
Sbjct: 131 GEARKAGVAPAETRTLLQELD-KLPALRVMGLMT--MPPWASTAEASRGHFRQLRQLADA 187
Query: 153 LGMA-----EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ A ELSMGMSGDFE A+E G+T VR+G+ IFG R+
Sbjct: 188 MAEAGLLGRHGPVELSMGMSGDFEVAVEEGATLVRVGTAIFGARD 232
>gi|386834786|ref|YP_006240103.1| hypothetical protein [Pasteurella multocida subsp. multocida str.
3480]
gi|385201489|gb|AFI46344.1| hypothetical protein NT08PM_1224 [Pasteurella multocida subsp.
multocida str. 3480]
Length = 236
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 60 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 115 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTD 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 173 DLATQTQAFTQMYSLFEQLKQALPDAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGT 231
Query: 191 REYAK 195
R+Y+K
Sbjct: 232 RDYSK 236
>gi|84394065|ref|ZP_00992801.1| Predicted enzyme with a TIM-barrel fold [Vibrio splendidus 12B01]
gi|84375307|gb|EAP92218.1| Predicted enzyme with a TIM-barrel fold [Vibrio splendidus 12B01]
Length = 238
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+++WHF+G +QSNK + + + V V +KIA L D+ S L PL+VL+QVN
Sbjct: 77 NLEWHFIGPIQSNKTRPI---AESFQWVHSVERDKIAQRLSDQRPSEL--PPLQVLIQVN 131
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAE 148
TSGEESKSG + + E + L PNL GLM+I + DY S F L AE
Sbjct: 132 TSGEESKSGTSEETVFALAELISL-LPNLTLRGLMSIPANVSDYQSQLNAFSQL----AE 186
Query: 149 VCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ L + LSMGMSGD + A+E GST VRIG+ IFG R+YA
Sbjct: 187 LKDKLAAKYPNIDTLSMGMSGDMDAAVEAGSTMVRIGTAIFGARDYA 233
>gi|380479159|emb|CCF43189.1| YggS family pyridoxal phosphate enzyme [Colletotrichum
higginsianum]
Length = 268
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 97/181 (53%), Gaps = 20/181 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---------- 78
LP I+WHF+G LQS AK L +PNL V V K A L+ + + L
Sbjct: 80 LPRSIQWHFIGGLQSTHAKKL-AKIPNLFCVSSVDTLKKAQLLNASRAELISSSSSSSPE 138
Query: 79 -GRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
+PL V VQVNTSGE+SKSG P + + + V CP L GLMTIG +
Sbjct: 139 QAVEPLGVHVQVNTSGEDSKSGAAPGAETVALCRAVEEECPALRLLGLMTIGAIARSRAT 198
Query: 135 TPEN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
T EN F L R V LG+ + ELSMGMS DFE A+++GS VR+GSTIFG
Sbjct: 199 TAENENEDFLCLRAQRDLVAAELGLGRE-LELSMGMSEDFEGAVKLGSGEVRVGSTIFGE 257
Query: 191 R 191
R
Sbjct: 258 R 258
>gi|226952374|ref|ZP_03822838.1| alanine racemase domain-containing protein [Acinetobacter sp. ATCC
27244]
gi|226836826|gb|EEH69209.1| alanine racemase domain-containing protein [Acinetobacter sp. ATCC
27244]
Length = 230
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 91/165 (55%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+GH+Q NK K L D V GV IA L + G++ L + +QVN
Sbjct: 73 EIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRLD-GQQALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G +P+ +VE + R PNL GLM I PD + + +TL + +V
Sbjct: 129 DGQDSKDGCEPNEVAELVEQIS-RLPNLRLRGLMVIPAPDNVAAFADAKTLFD---QVKS 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+D LSMGMS D + AI GST VR+G+ +FG R+Y+ K
Sbjct: 185 LHAQQQDWDTLSMGMSADLDAAIAAGSTMVRVGTALFGKRDYSSK 229
>gi|421262825|ref|ZP_15713910.1| hypothetical protein KCU_00614 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401690238|gb|EJS85519.1| hypothetical protein KCU_00614 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 233
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 57 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWLQTLDRKKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 112 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTD 169
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 DLATQEQAFTQMHSLFEQLKQALPNAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
R+Y+K
Sbjct: 229 RDYSK 233
>gi|342905044|ref|ZP_08726837.1| UPF0001 protein [Haemophilus haemolyticus M21621]
gi|341951981|gb|EGT78526.1| UPF0001 protein [Haemophilus haemolyticus M21621]
Length = 233
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRP-INKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + EN FR +L+ ++
Sbjct: 130 SDEESKSGIRPEEMLTLAKHIE-NLPHLRLRGLMAIPAPTDKIAEQENAFRKMLSLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D AI+ GST VRIG+ IFG R+Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARDYSK 233
>gi|407070396|ref|ZP_11101234.1| hypothetical protein VcycZ_12663 [Vibrio cyclitrophicus ZF14]
Length = 234
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+++WHF+G +QSNK + + + V V +KIA L D+ S L PL+VL+QVN
Sbjct: 77 NLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLNDQRPSEL--PPLQVLIQVN 131
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAE 148
TSGE SKSG + + E + PNL GLM+I + DY S F L + +
Sbjct: 132 TSGENSKSGTSEETVFALAELIS-SLPNLTLRGLMSIPANVSDYQSQLNAFSQLAKLQQK 190
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ D LSMGMSGD + A+E GST VRIG+ IFG R+YAK
Sbjct: 191 LVAKYA---DIDTLSMGMSGDMDAAVEAGSTMVRIGTAIFGARDYAK 234
>gi|425064875|ref|ZP_18467995.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like PROSC [Pasteurella multocida subsp.
gallicida P1059]
gi|404384590|gb|EJZ81023.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like PROSC [Pasteurella multocida subsp.
gallicida P1059]
Length = 236
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 60 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 115 EQRPHY-KKPLNVLIQINISNEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTD 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 173 DLATQEQAFTQMHTLFEQLKQALPNAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 231
Query: 191 REYAK 195
R+Y+K
Sbjct: 232 RDYSK 236
>gi|417852367|ref|ZP_12497957.1| hypothetical protein GEW_00779 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338216911|gb|EGP02850.1| hypothetical protein GEW_00779 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 233
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 57 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 112 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTD 169
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 DLATQEQAFTQMHTLFEQLKQALPNAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
R+Y+K
Sbjct: 229 RDYSK 233
>gi|336260872|ref|XP_003345228.1| hypothetical protein SMAC_09360 [Sordaria macrospora k-hell]
gi|380088478|emb|CCC13633.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 260
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 95/180 (52%), Gaps = 25/180 (13%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKP--- 82
LP IKWHF+G LQS K L + NL V + + K A L++ L P
Sbjct: 79 LPRTIKWHFIGGLQSTHCKPL-AKISNLFAVSSLDSLKKAQTLNRVRGELIASSSTPENQ 137
Query: 83 ---LKVLVQVNTSGEESKSGIDPSS-----CLGIVEHVRLRCPNLEFSGLMTIGM--PDY 132
L V VQVNTSGEESKSG P C IV CP+L+ GLMTIG
Sbjct: 138 IEKLNVHVQVNTSGEESKSGCSPGQETVDLCKAIVNE----CPHLKLLGLMTIGAIARSK 193
Query: 133 TSTPEN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
+TPEN F L R V K LG+ E ELSMGMS DFE AI MGS+ VR+GSTIF
Sbjct: 194 ATTPENENEDFVVLREQRELVEKELGLEEGSLELSMGMSEDFEGAIVMGSSEVRVGSTIF 253
>gi|19114789|ref|NP_593877.1| alanine racemase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74625289|sp|Q9P6Q1.1|YKC9_SCHPO RecName: Full=UPF0001 protein C644.09
gi|7708588|emb|CAB90136.1| alanine racemase (predicted) [Schizosaccharomyces pombe]
Length = 237
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Query: 23 FIDKYNL-PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F+ K L P+D++WHF+G LQS+K K + V NL +E + EK A ++ A L +
Sbjct: 57 FLKKVELMPDDVQWHFIGSLQSSKCKKI-ASVKNLYSIETIDTEKKARLVNSAREAL-QL 114
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE---N 138
PL V +QVNTSGEE+K G+ PS L + + V+ L GLMTIG + + +
Sbjct: 115 PLNVYIQVNTSGEENKGGVTPSKVLELCKQVQ-DMKYLRLKGLMTIGSISNSQLSDHNPD 173
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F+ L + R + LG+ +LSMGMS D+ AI+ GS SVR+GS+IFG R K
Sbjct: 174 FQVLSDLRESLQNELGIP---LQLSMGMSSDYLLAIKYGSDSVRVGSSIFGSRPTEK 227
>gi|15601977|ref|NP_245049.1| hypothetical protein PM0112 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|34223056|sp|Q9CPD5.1|Y112_PASMU RecName: Full=UPF0001 protein PM0112
gi|12720324|gb|AAK02196.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 233
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 57 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 112 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTD 169
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 DLATQEQAFTQMHSLFEQLKQALPDAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
R+Y+K
Sbjct: 229 RDYSK 233
>gi|260767465|ref|ZP_05876402.1| hypothetical protein VFA_000516 [Vibrio furnissii CIP 102972]
gi|260617577|gb|EEX42759.1| hypothetical protein VFA_000516 [Vibrio furnissii CIP 102972]
Length = 235
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 12/178 (6%)
Query: 21 LRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLG 79
++F +++ +++WHF+G LQSNK + + + D + + KIA L ++ ++L
Sbjct: 66 VQFFAEHHPELNLEWHFIGPLQSNKTRLI---AEHFDWMHTIDRAKIAQRLSEQRPAHL- 121
Query: 80 RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPE 137
PL+VL+QVNTSGE SKSG+ + + E + PNL GLM+I +PDY S
Sbjct: 122 -PPLQVLIQVNTSGEASKSGVSENDLFTLAELIS-SLPNLTLRGLMSIPENVPDYASQLA 179
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
FR L + ++ + + LSMGMSGD AIE GST VRIG+ IFG R+Y +
Sbjct: 180 AFRQLAALKDQLAEKYDGIDT---LSMGMSGDMAAAIEAGSTIVRIGTAIFGQRDYPR 234
>gi|443894488|dbj|GAC71836.1| proline synthetase co-transcribed protein [Pseudozyma antarctica
T-34]
Length = 955
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 111/229 (48%), Gaps = 66/229 (28%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR- 80
+DK LP +I+WHFVG LQSNK K LL +PNL ++E + + K AN L KA+S+
Sbjct: 250 MVDKAKVLPREIRWHFVGGLQSNKGK-LLASIPNLYLLETLDSIKAANVLQKALSSPDAA 308
Query: 81 ---KPLKVLVQVNTSGEESKSGIDP-----------SSCLGIVEHVRLRCPNLEFSGLMT 126
+PL+V +QVNTSGE++KSG+ P S L + HV +CPNL G+MT
Sbjct: 309 KRDEPLRVYLQVNTSGEDAKSGLPPILSTDAEQAKESELLKLAVHVITKCPNLRLRGVMT 368
Query: 127 IGM----------------------PDYTS---TPENFRTLLNCRAEVCKALGMAEDQC- 160
IG PD+ T +N LL A+V KA DQ
Sbjct: 369 IGAAANSSSADADQPKSVDEIVSANPDFERLIHTRKNLVELLRKDADVAKA-----DQTH 423
Query: 161 ------------------ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
ELSMGMS D + A GS +VR+G+ FG R
Sbjct: 424 VKEAYADLLEGSETNGGLELSMGMSADMDVATMAGSDNVRVGTDCFGRR 472
>gi|343498160|ref|ZP_08736199.1| hypothetical protein VITU9109_25425 [Vibrio tubiashii ATCC 19109]
gi|418479517|ref|ZP_13048597.1| hypothetical protein VT1337_13862 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342824601|gb|EGU59136.1| hypothetical protein VITU9109_25425 [Vibrio tubiashii ATCC 19109]
gi|384572857|gb|EIF03363.1| hypothetical protein VT1337_13862 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 238
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 8/167 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G +QSNK++ + N V V KIA L++ + P++VL+QVNT
Sbjct: 77 ELEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAKRLNEQRPD-DMAPIQVLIQVNT 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEV 149
SGE+SKSGI+ + E + PNL GLM+I + DY S + F L + ++
Sbjct: 133 SGEDSKSGINDDEIFELAELIS-SLPNLTLRGLMSIPANVSDYASQLDAFTQLAQLKDKL 191
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ ++ LSMGMSGD + AIE GST VRIG+ IFG R+Y+ K
Sbjct: 192 AQRFP-EQNIDTLSMGMSGDMQAAIEAGSTMVRIGTAIFGARDYSNK 237
>gi|344229250|gb|EGV61136.1| hypothetical protein CANTEDRAFT_116461 [Candida tenuis ATCC 10573]
gi|344229251|gb|EGV61137.1| hypothetical protein CANTEDRAFT_116461 [Candida tenuis ATCC 10573]
Length = 249
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 12/172 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQ++K K L + NL VE + + K L+ + + V +Q
Sbjct: 77 LPKDIKWHFIGSLQTDKCKVLAKNIENLHAVETIDSLKKCKKLNTHRQEVNGAVINVYLQ 136
Query: 89 VNTSGEESKSGIDPSSC--LGIVEHVRL----RCPNLEFSGLMTIG-MPDYTSTPEN--F 139
+NTSGE+ KSG S + E V C L F GLMTIG + TS+ +N F
Sbjct: 137 INTSGEDQKSGFKLSEGGKKDLYEAVSFLVSEECKFLSFEGLMTIGSFLESTSSEQNNDF 196
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ L++ + E+ + ++ + SMGMS DF+ AI GSTSVR+GS+IFG R
Sbjct: 197 KKLVDLKKELDEKFSLS---LKTSMGMSNDFQDAIRQGSTSVRVGSSIFGTR 245
>gi|322710536|gb|EFZ02110.1| alanine racemase family protein (ISS) [Metarhizium anisopliae ARSEF
23]
Length = 256
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 95/175 (54%), Gaps = 13/175 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-----VSNLGRKPL 83
LP+ I+WHF+G LQS KTL +PNL V V K A L+ S+ L
Sbjct: 73 LPKTIQWHFIGGLQSGHCKTL-AKIPNLFCVSSVDTLKKAALLNTTRGALLASDPSLPKL 131
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM----PDYTSTPEN 138
V VQVNTSGEE+KSG P + + + CPNL GLMTIG T+ EN
Sbjct: 132 SVHVQVNTSGEEAKSGCAPGEETVALCREIITNCPNLHLLGLMTIGAIARSKATTADNEN 191
Query: 139 --FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R V + L + + + ELSMGMS DFE A+ +GS VR+GSTIFG R
Sbjct: 192 DDFIALKQQRDLVARQLALDDARLELSMGMSEDFEGAVVLGSGEVRVGSTIFGTR 246
>gi|425062793|ref|ZP_18465918.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Pasteurella multocida
subsp. gallicida X73]
gi|404383499|gb|EJZ79950.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Pasteurella multocida
subsp. gallicida X73]
Length = 236
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 60 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 115 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTN 172
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 173 DLATQEQAFTQMHTLFEQLKQALPNAQIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 231
Query: 191 REYAK 195
R+Y+K
Sbjct: 232 RDYSK 236
>gi|388853442|emb|CCF52841.1| uncharacterized protein [Ustilago hordei]
Length = 941
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 111/224 (49%), Gaps = 56/224 (25%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR- 80
+DK LP +I+WHFVG LQSNK K LL +PNL ++E + + K AN L KA+S+
Sbjct: 246 MVDKAKVLPREIRWHFVGGLQSNKGK-LLASIPNLYLLETLDSIKAANVLQKALSSPDAA 304
Query: 81 ---KPLKVLVQVNTSGEESKSGIDP-----------SSCLGIVEHVRLRCPNLEFSGLMT 126
+PL+V +QVNTSGE +KSG+ P S L + HV +CPNL G+MT
Sbjct: 305 KRDEPLRVYLQVNTSGEGAKSGLPPILSTDAEQAKDSELLQLAVHVITKCPNLRLRGVMT 364
Query: 127 IGM----------------------PDYTS---TPENFRTLLNCRAEVCKA----LGMAE 157
IG PD+ T N LL AEV KA + A
Sbjct: 365 IGAAANSSSAKADEPKSVDEIVSANPDFERLIYTRANLVKLLRENAEVKKADQAHIKEAY 424
Query: 158 DQ----------CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
D+ ELSMGMS D + A GS +VR+G+ FG R
Sbjct: 425 DELVGGTDANGGLELSMGMSADMDVATMAGSNNVRVGTDCFGRR 468
>gi|357420139|ref|YP_004933131.1| alanine racemase [Thermovirga lienii DSM 17291]
gi|355397605|gb|AER67034.1| alanine racemase domain protein [Thermovirga lienii DSM 17291]
Length = 232
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 26 KYNLPEDIK--WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
K + PED++ WHF+G LQ NKA+ + D ++ V + +A+ L + ++ K L
Sbjct: 68 KNSWPEDVRIPWHFIGTLQRNKARK---AIDIFDCIQSVNSSTLADTLQR-IAKEKNKKL 123
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
+ +V+VN SGEESK G+DP +VEHV C L+ GLM GM T R
Sbjct: 124 ECMVEVNISGEESKQGVDPGDVEALVEHVLNDCDCLKLIGLM--GMAPLTEKEFEIRRSF 181
Query: 144 NCRAEVCKAL--GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+C L + ELSMGMS DFE AI GST VRIG+ +FGPR
Sbjct: 182 ALLRELCSKLEESLQIRLPELSMGMSDDFEYAIMEGSTMVRIGTALFGPR 231
>gi|378774819|ref|YP_005177062.1| alanine racemase family protein [Pasteurella multocida 36950]
gi|356597367|gb|AET16093.1| alanine racemase family protein [Pasteurella multocida 36950]
Length = 233
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+P ++WHF+G LQSNK K + + D ++ + +KIA+ L+
Sbjct: 57 YVQEGVEKIQYFAQKNIP--LEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + +KPL VL+Q+N S E+SKSGI P+ L + + ++ P+L GLM I P
Sbjct: 112 EQRPHY-KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQIQ-NLPHLCLRGLMAIPAPTD 169
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + + F + + ++ +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 DLATQEQAFTQMHSLFEQLKQALPNAKIDT-LSMGMTDDMASAIQCGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
R+Y+K
Sbjct: 229 RDYSK 233
>gi|332878865|ref|ZP_08446580.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332683216|gb|EGJ56098.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 242
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 114/202 (56%), Gaps = 19/202 (9%)
Query: 4 VTVALVKITYK--KSLI---KLLRFIDKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNL 56
VT +KI K +LI K+ +KY +D+ HF+GHLQ+NK K +L +
Sbjct: 38 VTPERIKIALKAGNTLIAENKIQELKEKYEALKDVPHTNHFIGHLQTNKIKEILRY--EV 95
Query: 57 DMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRC 116
VE V +A L +++ G K L + +QVNTS EESK G DP+ L +V+ V +
Sbjct: 96 SCVESVDRIDLAQKLHNRLASEG-KELDIFIQVNTSNEESKFGADPAEVLDLVKQVA-QL 153
Query: 117 PNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCKALGMAE-DQCELSMGMSGDFE 171
P L GLMTIG+ +++ E F+ L + E+ ALG+ D ELSMGMSGD E
Sbjct: 154 PTLHIKGLMTIGL--FSAETEKVRACFKLLKRLQQEII-ALGLPNVDPQELSMGMSGDLE 210
Query: 172 QAIEMGSTSVRIGSTIFGPREY 193
AIE G+T VR+G+ IFG R Y
Sbjct: 211 TAIEEGATIVRVGTAIFGQRIY 232
>gi|300778396|ref|ZP_07088254.1| YggS family pyridoxal phosphate enzyme [Chryseobacterium gleum ATCC
35910]
gi|300503906|gb|EFK35046.1| YggS family pyridoxal phosphate enzyme [Chryseobacterium gleum ATCC
35910]
Length = 219
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WH +GHLQ+NK K + P +D ++ V +EK+ ++K R +KVL+Q
Sbjct: 58 LPQDIQWHLIGHLQTNKVKYI---APFIDTIQSVDSEKVLAEINKEAGKNNR-IIKVLLQ 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
V + EESK G+D S + R + PN+E +GLM GM +T + R
Sbjct: 114 VKIAAEESKFGLDISEARDLFGKYRDGQFPNVEITGLM--GMATFTDDEQQVRNEFLILK 171
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ + LSMGMS DF AIE G+ SVR+GS IFG R+Y+K
Sbjct: 172 GLFDEFNQLKALNTLSMGMSDDFPIAIECGANSVRVGSAIFGRRDYSK 219
>gi|94971230|ref|YP_593278.1| hypothetical protein Acid345_4204 [Candidatus Koribacter versatilis
Ellin345]
gi|94553280|gb|ABF43204.1| Protein of unknown function UPF0001 [Candidatus Koribacter
versatilis Ellin345]
Length = 231
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D ++H +GHLQSNK+K V+ V + K+A L+ A +LG K L +L+++N
Sbjct: 73 DARFHMIGHLQSNKSK---AAAELFSAVDSVDSLKLAERLNAAARDLG-KTLDILIEINV 128
Query: 92 SGEESKSGIDPSS--CLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
GEE+KSG+ P S L I+EH + NL GLMT+ P +T PE R E+
Sbjct: 129 GGEEAKSGMPPESPEVLQILEHAK-EWQNLRMRGLMTV--PPFTEDPEGARPYFRTVREL 185
Query: 150 CKAL---GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ G A DQ LSMGMS DFE AIE GST VR+G+ IFG R
Sbjct: 186 RDSMALKGFALDQ--LSMGMSHDFEIAIEEGSTCVRVGTAIFGER 228
>gi|222054661|ref|YP_002537023.1| alanine racemase [Geobacter daltonii FRC-32]
gi|221563950|gb|ACM19922.1| alanine racemase domain protein [Geobacter daltonii FRC-32]
Length = 230
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E + WHF+G LQSNK + + G V +M+ V +A +D+ LGR VLVQVN
Sbjct: 70 EQVTWHFIGSLQSNKVRQIAGLV---EMIHSVDRLSLAREIDRQWQKLGR-ICNVLVQVN 125
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCR 146
+GE +KSG L +V ++ L PN+ GLMT MP + PE FR L +
Sbjct: 126 VAGEATKSGSSAGELLELVRNISL-LPNVRIKGLMT--MPPFFDDPEGARPYFRELRDLS 182
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ + ELSMGMSGDFE AIE G+T VR+GS IFG R+
Sbjct: 183 RMIADEPIANVEMNELSMGMSGDFEVAIEEGATLVRVGSAIFGERQ 228
>gi|261492832|ref|ZP_05989379.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494803|ref|ZP_05991281.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309514|gb|EEY10739.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311514|gb|EEY12670.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 249
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 96/164 (58%), Gaps = 10/164 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++WHF+G LQSNK K + + D ++ V KIA L + +G+ PL VL+Q+N
Sbjct: 93 DLEWHFIGPLQSNKTKLVAA---HFDWIQTVDRLKIAERLSEQ-RPIGKAPLNVLIQINI 148
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
S E SKSGI+P L + + + + PNL+ GLM I P+ S PE + + C+ +
Sbjct: 149 SDEASKSGIEPDEMLSLAQAIS-QLPNLKLRGLMAIPKPE--SEPEQ-QKIAFCKMQQLF 204
Query: 152 ALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AE + LSMGMS D + AIE GST VRIG+ IFG R+Y
Sbjct: 205 HRLQAEFEGIDTLSMGMSDDMQAAIECGSTMVRIGTAIFGARDY 248
>gi|258404223|ref|YP_003196965.1| alanine racemase domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257796450|gb|ACV67387.1| alanine racemase domain protein [Desulfohalobium retbaense DSM
5692]
Length = 235
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 13/163 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+WHF+GHLQ NKAK + G D+V V + ++A LDK + G +L+QV+ +
Sbjct: 77 IQWHFIGHLQRNKAKFVPG---RFDLVHTVDSVRLAQMLDKKAAEAGVVQ-AILLQVSLA 132
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL----NCRAE 148
GEE K+G+ P + ++ V + P+L+ G MT MP Y + PE R L R E
Sbjct: 133 GEEQKAGLAPEALEETLDTVG-QLPHLQLQGFMT--MPPYFNDPERVRPLFCRLRELRDE 189
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
LG + LSMGMSGDFE AI G+T VR+G+ IFGPR
Sbjct: 190 AQNQLG--RELPHLSMGMSGDFEVAIAEGATLVRVGTRIFGPR 230
>gi|417841526|ref|ZP_12487630.1| UPF0001 protein [Haemophilus haemolyticus M19501]
gi|341949564|gb|EGT76168.1| UPF0001 protein [Haemophilus haemolyticus M19501]
Length = 233
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + K A+ L+K + + PL VL+QVN
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLNRAKTADRLNKQRP-INKAPLNVLIQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D S EN FR +L+ ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDNISEQENAFRKMLSLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D AI+ GST VRIG+ IFG R+Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGTRDYSK 233
>gi|158521192|ref|YP_001529062.1| alanine racemase domain-containing protein [Desulfococcus
oleovorans Hxd3]
gi|158510018|gb|ABW66985.1| alanine racemase domain protein [Desulfococcus oleovorans Hxd3]
Length = 227
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 92/162 (56%), Gaps = 11/162 (6%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+GHLQSNKAK V D + V + K+A +DK + LG K K+L+QVNT E
Sbjct: 73 WHFIGHLQSNKAKI---AVSLFDWIHTVDSVKLAAEIDKHAAKLG-KVQKILIQVNTGQE 128
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCRAEVC 150
SKSG+ P G+V + R ++ GLM I P + + PE +F+ L R +
Sbjct: 129 RSKSGVAPEDMAGLVTEIS-RFAHVTVQGLMAI--PPFYADPEAVRPHFKKLRMLRDAIE 185
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
K ELSMGMSGDF+ AI G+T VRIG+ IFG R+
Sbjct: 186 KQQIPNVVMEELSMGMSGDFDAAIAEGATMVRIGTAIFGARQ 227
>gi|189423531|ref|YP_001950708.1| alanine racemase domain-containing protein [Geobacter lovleyi SZ]
gi|189419790|gb|ACD94188.1| alanine racemase domain protein [Geobacter lovleyi SZ]
Length = 228
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 23 FIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK L ++WH +GHLQSNK K L G V M+ V +A +D+ +
Sbjct: 61 LVDKAAQLARPVEWHMIGHLQSNKVKYLPGIV---SMIHTVDRLSLAQEIDRQWRDKQSA 117
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--- 138
+LVQVN SGE +KSG + + +V H+ + PN+ GLMT MP + PE
Sbjct: 118 ACDILVQVNVSGEATKSGTTATEAVELVRHI-AKLPNVRVRGLMT--MPPFFDDPEAARP 174
Query: 139 -FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
FR L + A + ELSMGMSGDFE AIE G+T VR+G+ IFG R
Sbjct: 175 YFRELRLLADRISSEQIPAVEMTELSMGMSGDFEVAIEEGATLVRVGTAIFGGR 228
>gi|323498672|ref|ZP_08103663.1| TIM-barrel fold family protein [Vibrio sinaloensis DSM 21326]
gi|323316272|gb|EGA69292.1| TIM-barrel fold family protein [Vibrio sinaloensis DSM 21326]
Length = 238
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 30 PE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
PE +++WHF+G +QSNK++ + N V V KIA L+ G P++VL+Q
Sbjct: 74 PELELEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAQRLNDQRP-AGSPPIQVLMQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCR 146
VNTSGE SKSG++ + E + PNL GLM+I + DY S F+ L
Sbjct: 130 VNTSGEASKSGLNQDEIFALAELIS-SLPNLTLRGLMSIPANVSDYDSQLAAFKQL---- 184
Query: 147 AEVCKAL--GMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
AE+ + L Q + LSMGMSGD E AIE GST VRIG+ IFG R+Y+ K
Sbjct: 185 AELQQTLINRYPNQQLDTLSMGMSGDMEAAIEAGSTMVRIGTAIFGARDYSNK 237
>gi|156836871|ref|XP_001642476.1| hypothetical protein Kpol_264p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113010|gb|EDO14618.1| hypothetical protein Kpol_264p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 270
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 98/175 (56%), Gaps = 18/175 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS--NLGRKPLKVL 86
LP+DI WHF+G LQSNK K L +PNL VE V + K AN L++A S N P+
Sbjct: 98 LPKDINWHFIGGLQSNKCKDL-AKIPNLYAVETVDSLKKANKLNEARSKYNPDSPPINCF 156
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLR--CPNLEFSGLMTIGM--------PDYTSTP 136
+Q+NTS EE KSG+ S + + N+ GLMTIG PDY +
Sbjct: 157 IQINTSNEEQKSGLSDESEIFEIIEFFFNSNTKNINLIGLMTIGSWETSHNNDPDYINL- 215
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F L+N ++++ +LSMGMS DF+QAI+ G++ VR+G+ IFG R
Sbjct: 216 -DFENLVNWKSKIDSKYNT---NLKLSMGMSADFKQAIKQGTSEVRVGTDIFGVR 266
>gi|343429427|emb|CBQ73000.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 956
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 111/224 (49%), Gaps = 56/224 (25%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR- 80
+DK LP++I+WHFVG LQSNK K LL + NL ++E + + K AN L KA+++
Sbjct: 251 MVDKAKVLPKEIRWHFVGGLQSNKGK-LLASISNLYLLETLDSVKAANVLQKALASPDAV 309
Query: 81 ---KPLKVLVQVNTSGEESKSGIDP-----------SSCLGIVEHVRLRCPNLEFSGLMT 126
+PL+V +QVNTSGE++KSG+ P S L + HV +CPNL G+MT
Sbjct: 310 KRDEPLRVYLQVNTSGEDAKSGLPPILSDDAEQARDSELLQLAVHVITKCPNLRLRGVMT 369
Query: 127 IG---------------MPDYTSTPENFRTLLNCRAEVCKALGMAED------------- 158
IG + + S +F L+ RA + K L ++D
Sbjct: 370 IGAASNSSSADADAAKSVDEIVSANPDFEKLIRTRANLVKLLRTSDDIQKADQPHIKDAY 429
Query: 159 -----------QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
ELSMGMS D + A GS +VR+G+ FG R
Sbjct: 430 ADLLDGAEATGGLELSMGMSADMDVATMAGSDNVRVGTDCFGRR 473
>gi|240948416|ref|ZP_04752794.1| hypothetical protein AM305_01454 [Actinobacillus minor NM305]
gi|240297242|gb|EER47800.1| hypothetical protein AM305_01454 [Actinobacillus minor NM305]
Length = 230
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 24 IDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
I+ + ++I+WHF+G LQSNK + + + D ++ V KIA L++ G+ PL
Sbjct: 63 INYFKENKEIEWHFIGPLQSNKTRLV---AEHFDWIQTVDRLKIAERLNEQRPE-GKAPL 118
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
VL+Q+N S E SKSGI P L + H PNL GLM I P+ S PE +
Sbjct: 119 NVLIQINISDESSKSGIAPEEMLELA-HKIASLPNLRLKGLMAIPKPE--SDPEQQKIAF 175
Query: 144 NCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
++ L A + LSMGMS D + AIE GST VRIG+ IFG R+Y +K
Sbjct: 176 RKMEQLFHRLQQAFSGIDTLSMGMSDDMQSAIECGSTMVRIGTAIFGKRDYGQK 229
>gi|86146413|ref|ZP_01064737.1| Predicted enzyme with a TIM-barrel fold [Vibrio sp. MED222]
gi|85835892|gb|EAQ54026.1| Predicted enzyme with a TIM-barrel fold [Vibrio sp. MED222]
Length = 238
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 12/166 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+++WHF+G +QSNK + + + V V +KIA L D+ + L PL+VL+QVN
Sbjct: 77 NLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLHDQRPNEL--PPLQVLIQVN 131
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAE 148
TSGE+SKSG + + E + PNL GLM+I + DY S + F L + + +
Sbjct: 132 TSGEDSKSGTSEETVFALAELIS-SLPNLTLRGLMSIPANVSDYQSQLKAFSQLADLQQK 190
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ D LSMGMSGD + A+E GST VRIG+ IFG R+YA
Sbjct: 191 LAAKY---PDIDTLSMGMSGDMDAAVEAGSTMVRIGTAIFGARDYA 233
>gi|320155279|ref|YP_004187658.1| hypothetical protein VVMO6_00433 [Vibrio vulnificus MO6-24/O]
gi|319930591|gb|ADV85455.1| hypothetical protein YggS proline synthase co-transcribed bacterial
PROSC-like protein [Vibrio vulnificus MO6-24/O]
Length = 208
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 12/187 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + ++ +RF + + + I+WHF+G +QSNK++ + + V + +KIA L
Sbjct: 30 YVQEGVEKVRFFAEQHPEKSIEWHFIGPIQSNKSRLV---AEHFAWVHTIDRDKIAQRLN 86
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GM 129
D+ + L PL+VL+QVNTSGE SKSG+ + E + PNL GLM+I +
Sbjct: 87 DQRPAEL--PPLQVLIQVNTSGEASKSGVSGEEIFALAELIST-LPNLTLRGLMSIPENV 143
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
D+ S F+ L + + + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 144 DDHASQLAAFQPLAELQQRLVQRYPSVDT---LSMGMSGDMDAAIESGSTMVRIGTAIFG 200
Query: 190 PREYAKK 196
R+Y+ K
Sbjct: 201 HRDYSNK 207
>gi|27364896|ref|NP_760424.1| hypothetical protein VV1_1525 [Vibrio vulnificus CMCP6]
gi|27361041|gb|AAO09951.1| protein of unknown function [Vibrio vulnificus CMCP6]
Length = 236
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 12/187 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + ++ +RF + + + I+WHF+G +QSNK++ + + V + +KIA L
Sbjct: 58 YVQEGVEKVRFFAEQHPEKSIEWHFIGPIQSNKSRLV---AEHFAWVHTIDRDKIAQRLN 114
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GM 129
D+ + L PL+VL+QVNTSGE SKSG+ + E + PNL GLM+I +
Sbjct: 115 DQRPAEL--PPLQVLIQVNTSGEASKSGVSGEEIFALAELIST-LPNLTLRGLMSIPENV 171
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
D+ S F+ L + + + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 172 DDHASQLAAFQPLAELQQRLVQRYPSVDT---LSMGMSGDMDAAIESGSTMVRIGTAIFG 228
Query: 190 PREYAKK 196
R+Y+ K
Sbjct: 229 HRDYSNK 235
>gi|312883848|ref|ZP_07743565.1| TIM-barrel fold family protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368306|gb|EFP95841.1| TIM-barrel fold family protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 238
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 30 PE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
PE +++WHF+G +QSNK++ + N V V K+A L+ G PL+VL+Q
Sbjct: 74 PELELEWHFIGPIQSNKSRYV---AENFHWVHSVNKAKLAQRLNDQRPE-GLPPLQVLIQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VNTSGE SKSGI+ + + E + PNL GLM+I P TS E + A
Sbjct: 130 VNTSGETSKSGINDNEIFSLAELIS-SLPNLTLRGLMSI--PAQTSNYEEQLSAFGELAN 186
Query: 149 VCKALG--MAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ + L + Q + LSMGMSGD + AIE G+T VRIG+ IFG R+Y+ KQ
Sbjct: 187 LQQTLKNRFSNQQIDTLSMGMSGDMQAAIESGTTMVRIGTAIFGQRDYSNKQ 238
>gi|257465703|ref|ZP_05630074.1| hypothetical protein AM202_04262 [Actinobacillus minor 202]
gi|257451363|gb|EEV25406.1| hypothetical protein AM202_04262 [Actinobacillus minor 202]
Length = 228
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Query: 24 IDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
I+ + E+I+WHF+G LQSNK++ + + D ++ V KIA L++ +G+ PL
Sbjct: 63 INYFKENEEIEWHFIGPLQSNKSRLV---AEHFDWIQTVDRLKIAERLNEQ-RPVGKAPL 118
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
VL+Q+N S E SKSGI P L + H PNL GLM I P+ S PE + L
Sbjct: 119 NVLIQINISDESSKSGIAPEEMLELA-HKIASLPNLRLRGLMAIPKPE--SDPEQQKVAL 175
Query: 144 NCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ L + LSMGMS D + AIE GST VRIG+ IFG R+Y
Sbjct: 176 RKMEQLFHRLQQDFSGIDTLSMGMSDDMQSAIECGSTMVRIGTAIFGARDY 226
>gi|313203129|ref|YP_004041786.1| alanine racemase [Paludibacter propionicigenes WB4]
gi|312442445|gb|ADQ78801.1| alanine racemase domain protein [Paludibacter propionicigenes WB4]
Length = 222
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI WHF+GHLQ+NK + + VP + ++ GV + K+ +DK + G K + L+Q
Sbjct: 58 LPKDIVWHFIGHLQTNKIRYI---VPFISLIHGVDSYKLLTEIDKQAAKAG-KTVHCLLQ 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEH-VRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
V+ + EE+K G+ P L + E + N++ GLM GM YT + R N
Sbjct: 114 VHIAQEETKFGLSPDELLEMFEAGAWKQLKNIQICGLM--GMATYTVNKDQIRREFNGLK 171
Query: 148 EVC-----KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + CELSMGMS DF+ AIE GST VR+GS+IFG R Y
Sbjct: 172 TLFDQVKQQYFSNETSFCELSMGMSDDFQIAIEEGSTLVRVGSSIFGHRNY 222
>gi|322420078|ref|YP_004199301.1| alanine racemase domain-containing protein [Geobacter sp. M18]
gi|320126465|gb|ADW14025.1| alanine racemase domain protein [Geobacter sp. M18]
Length = 231
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
L ++I WHF+G LQSNK + + G V D++ V +A +D+ LG K +LV
Sbjct: 68 ELTQEISWHFIGSLQSNKVRQIAGRV---DLIHSVDRSSLAREIDRQWGALG-KVCDILV 123
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLL 143
QVN S EE+K G L +V V + +L GLMT MP + PE FR L
Sbjct: 124 QVNISREETKGGTSSEELLDLVREV-AQLQHLRVRGLMT--MPPFFDDPEGARPYFRRLR 180
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
EV A + ELSMGMSGDFE AIE G+T VR+GS +FG R+Y
Sbjct: 181 ELAGEVAAAAIAGVEMRELSMGMSGDFEAAIEEGATLVRVGSALFGERQY 230
>gi|37681058|ref|NP_935667.1| TIM-barrel fold family protein [Vibrio vulnificus YJ016]
gi|37199808|dbj|BAC95638.1| predicted enzyme with a TIM-barrel fold [Vibrio vulnificus YJ016]
Length = 236
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 12/187 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + ++ +RF + + + I+WHF+G +QSNK++ + + V + +KIA L
Sbjct: 58 YVQEGVEKVRFFAEQHPEKSIEWHFIGPIQSNKSRLV---AEHFAWVHTIDRDKIAQRLN 114
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GM 129
D+ + L PL+VL+QVNTSGE SKSG+ + E + PNL GLM+I +
Sbjct: 115 DQRPAEL--PPLQVLIQVNTSGEASKSGVSGEEIFALAELIST-LPNLTLRGLMSIPENV 171
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
D+ S F+ L + + + + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 172 DDHVSQLAAFQPLAELQQRLLQRYPSVDT---LSMGMSGDMDAAIESGSTMVRIGTAIFG 228
Query: 190 PREYAKK 196
R+Y+ K
Sbjct: 229 HRDYSNK 235
>gi|291522267|emb|CBK80560.1| pyridoxal phosphate enzyme, YggS family [Coprococcus catus GD/7]
Length = 230
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ DKY LP++I+WH +GHLQ NK K L+G V ++ V + ++A ++ +
Sbjct: 56 KVQELSDKYEVLPKNIRWHMIGHLQRNKVKYLIGKVV---LIHSVDSLRLAEQIEHEAAK 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+ VL++VN + EESK G + + +VE V + P+++ GLMTI +T PE
Sbjct: 113 -ADIVMPVLIEVNVAEEESKFGTTSEAAMQLVEAVS-KLPHIKIRGLMTIA--PFTDNPE 168
Query: 138 N----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ FR L ++ D ELSMGM+GD+E AIE G+T VR+G+ IFG R Y
Sbjct: 169 DNRIYFRKLKQLSVDIKSKNIDNVDMDELSMGMTGDYEVAIEEGATMVRVGTGIFGKRNY 228
>gi|406603656|emb|CCH44809.1| Proline synthetase [Wickerhamomyces ciferrii]
Length = 277
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 96/171 (56%), Gaps = 13/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWHF+G LQSNK K L + NL VE + + K A L+ + S + + + +Q
Sbjct: 102 LPKDIKWHFIGGLQSNKCKDLSNNIENLHSVETIDSLKKAKKLNDSRSGVNGSIINIYLQ 161
Query: 89 VNTSGEESKSGIDPSSCLGI---VEHVRLRCPNLEFSGLMTIGMPDY---TSTPEN--FR 140
+N S E KSG+ P GI ++++ +L GLM G+ Y TS EN F+
Sbjct: 162 INASNESQKSGLKPDDFEGIDELIQYITKDAKSLNLEGLM--GIASYEQSTSEGENKDFK 219
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L+ + ++ + +LSMGM+ DFE+AI G++ VRIGS IFG R
Sbjct: 220 VLVELQKQLNTKYNL---NLKLSMGMTADFEEAIRQGTSYVRIGSAIFGSR 267
>gi|357037205|ref|ZP_09099005.1| protein of unknown function UPF0001 [Desulfotomaculum gibsoniae DSM
7213]
gi|355361370|gb|EHG09125.1| protein of unknown function UPF0001 [Desulfotomaculum gibsoniae DSM
7213]
Length = 221
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
IDK N LP DI WH +GHLQ+NK K ++G V +++ + + +A + + NL
Sbjct: 61 LIDKINALPADINWHMIGHLQTNKVKYIVGRV---NLIHSLDSWSLAEEIHRRAVNL-EV 116
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT 141
+VLVQVNTSGE++K GI P + +R P + GLMTI Y PE R
Sbjct: 117 TTRVLVQVNTSGEKTKYGISPEELADFLAALR-DLPQISVQGLMTIA--PYAQNPEEVRP 173
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ L A + LSMGM+ DFE A+E G+ +R+G+ IFG R
Sbjct: 174 YFRE----LRLLATAHNLEHLSMGMTNDFEVAVEEGADMLRLGTAIFGSR 219
>gi|373458946|ref|ZP_09550713.1| protein of unknown function UPF0001 [Caldithrix abyssi DSM 13497]
gi|371720610|gb|EHO42381.1| protein of unknown function UPF0001 [Caldithrix abyssi DSM 13497]
Length = 232
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 90/165 (54%), Gaps = 8/165 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDI+WHF+GHLQ+NK K + P ++ V + ++A LD+ + VL++
Sbjct: 70 LPEDIQWHFIGHLQTNKIKYV---APRAVLIHSVDSLRLAEALDQFAEKRSLT-IPVLLE 125
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCR 146
VN SGE SK G P E + +L GLMTIG D + FR L N R
Sbjct: 126 VNVSGESSKFGFAPEKTPEAFEKI-AGLKHLHIKGLMTIGPLSDDRQKIRQAFRQLYNLR 184
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ K E LSMGMSGDFE AIE GST +RIG+ IFG R
Sbjct: 185 EDLQKTASGVELPV-LSMGMSGDFEIAIEEGSTHIRIGTAIFGAR 228
>gi|218710629|ref|YP_002418250.1| hypothetical protein VS_2683 [Vibrio splendidus LGP32]
gi|218323648|emb|CAV19942.1| Hypothetical protein VS_2683 [Vibrio splendidus LGP32]
Length = 238
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 14/167 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+++WHF+G +QSNK + + + V V +KIA L D+ + L PL+VL+QVN
Sbjct: 77 NLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLHDQRPNEL--PPLQVLIQVN 131
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAE 148
TSGE+SKSG + + E + PNL GLM+I + DY S + F L AE
Sbjct: 132 TSGEDSKSGTSEETVFALAELIS-SLPNLTLRGLMSIPANVSDYQSQLKAFSQL----AE 186
Query: 149 VCKALGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ + L D LSMGMSGD + A+E GST VRIG+ IFG R+YA
Sbjct: 187 LQQKLAAKYPDIDTLSMGMSGDMDAAVEAGSTMVRIGTAIFGARDYA 233
>gi|282855832|ref|ZP_06265134.1| pyridoxal phosphate enzyme, YggS family [Pyramidobacter piscolens
W5455]
gi|282586346|gb|EFB91612.1| pyridoxal phosphate enzyme, YggS family [Pyramidobacter piscolens
W5455]
Length = 231
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WH +GHLQ NKA+ V D++E + E IA +++ + ++ L VL++VN+SGE
Sbjct: 80 WHLIGHLQRNKARK---AVELFDVIESIDGEGIAAAVERVCAEKDKR-LDVLIEVNSSGE 135
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALG 154
SK+G + + + VR +CP+L+ GLMTIG R + E+ L
Sbjct: 136 ASKTGTPAAEVPALADFVRGQCPHLKLQGLMTIG--PLGGDERAVRGAFDATRELRDRLR 193
Query: 155 MAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ D LSMGMSGDFE AIE GST VR+G+ IFG R
Sbjct: 194 LSADDLPCLSMGMSGDFEWAIEQGSTEVRVGTAIFGHR 231
>gi|119356538|ref|YP_911182.1| alanine racemase domain-containing protein [Chlorobium
phaeobacteroides DSM 266]
gi|119353887|gb|ABL64758.1| alanine racemase domain protein [Chlorobium phaeobacteroides DSM
266]
Length = 229
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 10 KITYKKSLIKLLRFIDKYNLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNE 65
+I + +S ++ F++K + P ++WHF+GHLQSNK +++ G V +V G+
Sbjct: 51 QIEFGESYVQ--EFLEKRDDPLLQGLPLQWHFIGHLQSNKIRSIAGKVA---LVHGIDRL 105
Query: 66 KIANHLDKAV--SNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSG 123
A L + NL + L++VNTSGE++K GI P L E + + PN+ G
Sbjct: 106 STAAELSRRSMQQNLH---TEFLLEVNTSGEQTKYGISPDVLLSEAEKI-FKLPNIALRG 161
Query: 124 LMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRI 183
LMTI PD + FR L N + K ELSMGMS DFE AIE G+T +RI
Sbjct: 162 LMTIASPDTDLARKEFRELRNLLEALKKNAPDPTLLTELSMGMSQDFESAIEEGATIIRI 221
Query: 184 GSTIFGPR 191
G+ IFG R
Sbjct: 222 GTAIFGWR 229
>gi|194337101|ref|YP_002018895.1| alanine racemase domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309578|gb|ACF44278.1| alanine racemase domain protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 229
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 11/162 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV--LVQVN 90
I+WHF+GHLQSNK ++++G V ++ G+ A L K R L+V L++VN
Sbjct: 76 IEWHFIGHLQSNKIRSIIGKV---SLIHGIDKLSTAEELSKRAL---RNNLQVDYLLEVN 129
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
TSGE SK G+ P L + E + PN+ GLMTI PD + FR LL +
Sbjct: 130 TSGEASKYGMSPEELLSLAESL-FTLPNITLRGLMTIASPDRVLAQQEFR-LLRTLLDAL 187
Query: 151 KALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
K + + ELSMGMSGDF +AI G+T +R+G+ IFG R
Sbjct: 188 KPISPDPSKLTELSMGMSGDFREAIHEGATMIRVGTAIFGWR 229
>gi|420150492|ref|ZP_14657651.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 335 str. F0486]
gi|394752084|gb|EJF35799.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 335 str. F0486]
Length = 241
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L + N G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKDILRY--EVSCVESVDRLDLAQKLHNRLENEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
SK G DPS L +V+ V P L GLMTIG+ +++ E F+ L + + E+
Sbjct: 134 SKFGADPSEVLNLVKQVA-TLPTLHIKGLMTIGL--FSAETEKVRACFKLLKHLQQEII- 189
Query: 152 ALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 190 ALNLPNVDPRELSMGMSGDLETAIEEGATIVRVGTAIFGKRIY 232
>gi|148265705|ref|YP_001232411.1| alanine racemase domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146399205|gb|ABQ27838.1| alanine racemase domain protein [Geobacter uraniireducens Rf4]
Length = 237
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 93/172 (54%), Gaps = 11/172 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+ E + WHF+G LQSNK + + G V +M+ V +A +D+ LG K VL+
Sbjct: 67 QVSESVAWHFIGGLQSNKVRQIAGLV---EMIHSVDRLSLAREIDRQWGRLG-KTCNVLI 122
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLL 143
QVN + E SK G + + LG+V +V P+L GLMT MP + PE FR L
Sbjct: 123 QVNIACEASKCGANSADVLGLVRNVAA-LPHLRIKGLMT--MPPFFDDPEGARPYFRELK 179
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
V + + ELSMGMSGDFE AI G+T VR+GS IFG RE +
Sbjct: 180 RLSELVAAERILKVEMTELSMGMSGDFEVAIAEGATLVRVGSAIFGERERQR 231
>gi|303258028|ref|ZP_07344037.1| pyridoxal phosphate enzyme, YggS family [Burkholderiales bacterium
1_1_47]
gi|330999444|ref|ZP_08323158.1| pyridoxal phosphate enzyme, YggS family [Parasutterella
excrementihominis YIT 11859]
gi|302859371|gb|EFL82453.1| pyridoxal phosphate enzyme, YggS family [Burkholderiales bacterium
1_1_47]
gi|329574870|gb|EGG56429.1| pyridoxal phosphate enzyme, YggS family [Parasutterella
excrementihominis YIT 11859]
Length = 241
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 97/183 (53%), Gaps = 17/183 (9%)
Query: 21 LRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
+ + K + +I WHF+GHLQSNK + + + D V+ V KIA L +
Sbjct: 70 IEYFKKQHPDLEITWHFIGHLQSNKTRPV---AEHFDWVQTVDRLKIAQRLSEQ-RPADM 125
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST----- 135
PL VL++V+ S EESKSG P+ + + + L PNL+ G+M I P T
Sbjct: 126 PPLNVLIEVHISDEESKSGCQPADVPALAQAITL-LPNLKLRGIMAIPAPSDTEEGKKAP 184
Query: 136 -PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
E + L+ R E + D LSMGMS D +A+E GST VR+GS IFGPR+Y
Sbjct: 185 LKEMYAIFLHLRDE------LNFDIDTLSMGMSSDMAEAVECGSTMVRVGSAIFGPRDYT 238
Query: 195 KKQ 197
KK+
Sbjct: 239 KKE 241
>gi|295112147|emb|CBL28897.1| pyridoxal phosphate enzyme, YggS family [Synergistetes bacterium
SGP1]
Length = 231
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 95/167 (56%), Gaps = 21/167 (12%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
W +GHLQ+NKA+ V D V+ + + +A LD+ L R+ L VL++VNT+ E
Sbjct: 75 WRLIGHLQNNKARR---AVELFDAVDSLDSIPLAERLDRIAGELSRR-LSVLIEVNTAKE 130
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALG 154
SK+G+ P + +++ V L PNL+ GLMTIG T + R R + G
Sbjct: 131 ASKTGMAPEAFPALLDRV-LTLPNLKLEGLMTIG----PLTDDEVR----VRQAFAELRG 181
Query: 155 MAED---QCEL-----SMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
MAED +C L SMGMSGDFE I GST VRIG+ +FGPREY
Sbjct: 182 MAEDARGRCGLPLPVLSMGMSGDFEWGILEGSTMVRIGTALFGPREY 228
>gi|320538009|ref|ZP_08037914.1| pyridoxal phosphate enzyme, YggS family [Treponema phagedenis
F0421]
gi|320145166|gb|EFW36877.1| pyridoxal phosphate enzyme, YggS family [Treponema phagedenis
F0421]
Length = 232
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 95/164 (57%), Gaps = 11/164 (6%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
+ HF+GHLQ+NK K + + D +E V +A L + + G K + VL+QVNTS
Sbjct: 75 RAHFIGHLQTNKIKDV---IQYADCIESVDRFDLAEKLARRLRFEG-KTIDVLIQVNTSA 130
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT---LLNCRAEVC 150
EE+KSG P L +++ V P+L GLMTIG+ ++S E R LL E C
Sbjct: 131 EETKSGCAPEEALSLIKQVSA-FPDLRIKGLMTIGL--FSSDTEKVRACYRLLKNIQEDC 187
Query: 151 KALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
L + + LSMGMSGDFE AIE GST VR+G++IFG R Y
Sbjct: 188 IKLALPNVEMAVLSMGMSGDFEIAIEEGSTEVRVGTSIFGERVY 231
>gi|289423142|ref|ZP_06424957.1| pyridoxal phosphate enzyme, YggS family [Peptostreptococcus
anaerobius 653-L]
gi|289156473|gb|EFD05123.1| pyridoxal phosphate enzyme, YggS family [Peptostreptococcus
anaerobius 653-L]
Length = 233
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 9/174 (5%)
Query: 26 KYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLK 84
KY++ +D +KWH +G LQ+NK K ++ V +++ + ++A+ ++ + R +K
Sbjct: 65 KYDIIKDRVKWHQIGSLQTNKVKYIIDKV---ELIHSLDRVRLADEINLRADRIDR-DIK 120
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS--TPENFRTL 142
LVQVN SGEESK G+ PS V + CP + G+MT+ D FR L
Sbjct: 121 CLVQVNMSGEESKHGLRPSDVEDFVRYCSSNCPRIRIVGMMTMAAADADEKGVRACFRGL 180
Query: 143 LNCRAEVCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ + + LG+ + ELSMGMSGD++ AIE GST VR+G++IFG R+Y+K
Sbjct: 181 RDLSQSIDR-LGLDNVKMKELSMGMSGDYKIAIEEGSTIVRVGTSIFGKRDYSK 233
>gi|302391655|ref|YP_003827475.1| alanine racemase [Acetohalobium arabaticum DSM 5501]
gi|302203732|gb|ADL12410.1| alanine racemase domain protein [Acetohalobium arabaticum DSM 5501]
Length = 232
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 106/184 (57%), Gaps = 12/184 (6%)
Query: 15 KSLIKLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK 73
+S ++ LR DKY N+ + I WH +GHLQ NK K ++ + +++ + + ++A ++K
Sbjct: 56 ESRVQELR--DKYDNISQKINWHMIGHLQRNKVKYIMR-MERCNLIHSMDSMRLAKKINK 112
Query: 74 AVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT 133
+ + + + VLVQ+N +G+E+K G++P + + V NL+ GLMT M Y
Sbjct: 113 R-AGMADRVMNVLVQINVAGDENKFGLEPEETIDYLRKV-AEFENLQVKGLMT--MVPYV 168
Query: 134 STPENFRTLLNCRAEVCKALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
E R E+ + + AE + ELSMG++ DFE AIE G+T VR+GS IFG
Sbjct: 169 DDTEQVRPYFRELKELFEEVKRAEIPNIEMQELSMGITNDFEVAIEEGATIVRVGSAIFG 228
Query: 190 PREY 193
PREY
Sbjct: 229 PREY 232
>gi|429727338|ref|ZP_19262112.1| pyridoxal phosphate enzyme, YggS family [Peptostreptococcus
anaerobius VPI 4330]
gi|429152790|gb|EKX95600.1| pyridoxal phosphate enzyme, YggS family [Peptostreptococcus
anaerobius VPI 4330]
Length = 241
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 9/174 (5%)
Query: 26 KYNLPED-IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLK 84
KY++ +D +KWH +G LQ+NK K ++ V +++ + ++A+ ++ + R +K
Sbjct: 73 KYDIIKDRVKWHQIGSLQTNKVKYIIDKV---ELIHSLDRVRLADEINLRADKIDR-DIK 128
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS--TPENFRTL 142
LVQVN SGEESK G+ PS V + CP + G+MT+ D FR L
Sbjct: 129 CLVQVNMSGEESKHGLRPSDVEDFVRYCSSNCPRIRIVGMMTMAAADADEKGVRACFRGL 188
Query: 143 LNCRAEVCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ + + LG+ + ELSMGMSGD++ AIE GST VR+G++IFG R+Y+K
Sbjct: 189 RDLSQSIDR-LGLDNVKMKELSMGMSGDYKIAIEEGSTIVRVGTSIFGKRDYSK 241
>gi|187476708|ref|YP_784731.1| hypothetical protein BAV0193 [Bordetella avium 197N]
gi|115421294|emb|CAJ47799.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 232
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 11/164 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ W +GHLQ+NK K + V V+ + ++A+ L + + GR+ L VL+QV TS
Sbjct: 75 LSWVMIGHLQTNKVKDVARDVAE---VQSLDRLELADALQRRLETAGRE-LDVLIQVKTS 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAE-V 149
E SK G+ P + ++ H+R CP L GLMT+ + D+ + FR L R +
Sbjct: 131 PEPSKFGLPPETLPAMLTHLRQACPALRVQGLMTMAINSEDHAAVRACFRRLRELRDQHA 190
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
A+ +A LSMGMSGDFE AIE GST VRIGS +FG R Y
Sbjct: 191 SSAVPLAR----LSMGMSGDFEIAIEEGSTEVRIGSALFGARNY 230
>gi|445421367|ref|ZP_21435800.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter sp. WC-743]
gi|444757778|gb|ELW82294.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter sp. WC-743]
Length = 230
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L V GV IA L K + + PL + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFAWVHGVDRFIIAERLSKQ-RDATQNPLNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
++SK G P + +V+ + L PNL GLM I P +T ++ + L + +V
Sbjct: 129 DAQDSKDGCQPEEVVELVKQISL-LPNLRLRGLMVIPAPHHTEAFQDAKQLFD---QVKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD +AI GST VRIG+ +FG R+Y+ K
Sbjct: 185 FHVRPEDWDTLSMGMSGDLAEAIAAGSTMVRIGTALFGARDYSNK 229
>gi|294649640|ref|ZP_06727054.1| alanine racemase domain protein [Acinetobacter haemolyticus ATCC
19194]
gi|292824456|gb|EFF83245.1| alanine racemase domain protein [Acinetobacter haemolyticus ATCC
19194]
Length = 228
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+GH+Q NK K L D V GV IA L +KPL + +QVN
Sbjct: 73 EIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRLE-TQKPLNICIQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P+ +VE + + PNL GLM I PD + + +TL + +V
Sbjct: 129 DGQDSKDGCQPNEVSELVEQIS-QLPNLRLRGLMVIPAPDNVAAFADAKTLFD---QVKS 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+D LSMGMS D + AI GST VR+G+ +FG R+Y+
Sbjct: 185 LHAQQQDWDTLSMGMSADLDAAIAAGSTMVRVGTALFGKRDYS 227
>gi|423335569|ref|ZP_17313344.1| putative alanine racemase [Lactobacillus reuteri ATCC 53608]
gi|337728799|emb|CCC03918.1| putative alanine racemase [Lactobacillus reuteri ATCC 53608]
Length = 235
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 18/177 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP---LKV 85
LP DI W+ +GHLQ NK K + V M++ V + K+ N ++K GRK + +
Sbjct: 68 LPADINWYMIGHLQRNKVKYIADYVT---MIQSVDSLKLMNMIEKE----GRKHDRIIPI 120
Query: 86 LVQVNTSGEESKSGIDPS--SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
L++VN EESK G+ P+ C+ + E L+ P+++ GLMT Y PE R +
Sbjct: 121 LIEVNVGEEESKFGVKPTLQDCMELAE-ASLQLPHVKLRGLMTSA--PYYDDPEKTRPIF 177
Query: 144 NCRAEVCKALGMAEDQCEL---SMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
E+ + DQ +L SMGM+ D+E A+E GST VR+G+ IFGPR+Y+ +Q
Sbjct: 178 RQLRELRDEMNNQNDQLKLDVLSMGMTHDYEIAVEEGSTCVRVGTAIFGPRDYSNRQ 234
>gi|237747221|ref|ZP_04577701.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378572|gb|EEO28663.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 239
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
++WHF+G +QSNK +++ + D V V EKIA L D+ + L PL + +QVN
Sbjct: 78 LEWHFIGPIQSNKTRSI---AEHFDWVHSVDREKIARRLSDQRPAALA--PLNICLQVNI 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGE SKSGI P + LG+ + V P L+ GLM I P+ S+P+ R +
Sbjct: 133 SGEASKSGIHPENLLGMAKTVSA-MPRLKLRGLMAI--PEPESSPDRQREPFKAMKVLFN 189
Query: 152 ALGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
L A D LSMGMS D + AIE G+T+VRIG+ IFG R Y+ ++ +
Sbjct: 190 QLRKAGYDVDTLSMGMSDDMDAAIEEGATTVRIGTAIFGKRNYSSRKDS 238
>gi|261250164|ref|ZP_05942740.1| hypothetical protein VIA_000184 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417953249|ref|ZP_12596296.1| hypothetical protein VIOR3934_09580 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939280|gb|EEX95266.1| hypothetical protein VIA_000184 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342817424|gb|EGU52305.1| hypothetical protein VIOR3934_09580 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 238
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 96/167 (57%), Gaps = 10/167 (5%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+G +QSNK++ + N V + KIA L+ G P++VL+QVNTS
Sbjct: 78 LEWHFIGPIQSNKSRHV---AENFAWVHTIDRAKIAQRLNDQ-RPAGSAPIQVLMQVNTS 133
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEVC 150
GE+SKSG++ + E + PNL GLM+I + DY S F L + ++
Sbjct: 134 GEQSKSGLNDDEIFELAELIS-SLPNLTLRGLMSIPANVTDYASQLGAFTQLAELKDKLA 192
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ E + + LSMGMSGD E A+E GST VRIG+ IFG R+Y+ K
Sbjct: 193 QRY--PEQKIDTLSMGMSGDMEAAVEAGSTMVRIGTAIFGARDYSNK 237
>gi|194466523|ref|ZP_03072510.1| alanine racemase domain protein [Lactobacillus reuteri 100-23]
gi|194453559|gb|EDX42456.1| alanine racemase domain protein [Lactobacillus reuteri 100-23]
Length = 235
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 18/177 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP---LKV 85
LP DI W+ +GHLQ NK K + V M++ V + K+ N ++K GRK + +
Sbjct: 68 LPADINWYMIGHLQRNKVKYIADYVT---MIQSVDSLKLMNTIEKE----GRKHDRIIPI 120
Query: 86 LVQVNTSGEESKSGIDPS--SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
L++VN EESK G+ P+ C+ + E L+ P+++ GLMT Y PE R +
Sbjct: 121 LIEVNVGEEESKFGVKPTLQDCMELAE-ASLQLPHVKLRGLMTSA--PYYDDPEKTRPIF 177
Query: 144 NCRAEVCKALGMAEDQCEL---SMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
E+ + DQ +L SMGM+ D+E A+E GST VR+G+ IFGPR+Y+ +Q
Sbjct: 178 RRLRELRDKMNKQNDQLKLDVLSMGMTHDYEIAVEEGSTCVRVGTAIFGPRDYSNRQ 234
>gi|325294730|ref|YP_004281244.1| hypothetical protein Dester_0534 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065178|gb|ADY73185.1| protein of unknown function UPF0001 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 228
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 96/165 (58%), Gaps = 13/165 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+WH +GHLQ NK K V ++E V ++++A+ L+K +S +G+K L+V ++V S
Sbjct: 73 IEWHMIGHLQKNKVKY---AVNLFKVIESVDSKELADELEKRLSKIGKK-LEVFIEVKLS 128
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCRAE 148
EE+K G P+ + +V L +L+ GLMT+ P Y E FR L R
Sbjct: 129 PEETKHGCSPNEVEELARYV-LELKHLDLKGLMTV--PPYFEDVELVRPYFRRLRKIRDR 185
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ +LGM LSMGMS DFE A+E G+T VRIG+ IFGPR Y
Sbjct: 186 LEDSLGMKIPH--LSMGMSHDFEVAVEEGATIVRIGTAIFGPRNY 228
>gi|421857446|ref|ZP_16289781.1| hypothetical protein ACRAD_52_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403187094|dbj|GAB75982.1| hypothetical protein ACRAD_52_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 231
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L N D V GV IA L A R L + +QVN
Sbjct: 74 DIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERL-SAQRPEQRAALNICIQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V+ + + PNL GLM I P +T E+ R L N +
Sbjct: 130 DGQESKDGCSPEQVAELVKMIS-QLPNLCLRGLMVIPAPGHTDAFEHTRQLFN-QVRTFH 187
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
A D LSMGMS D E A+ GST VRIG+ +FG R+Y+ K
Sbjct: 188 AHPQVWD--TLSMGMSADLEAAVVAGSTMVRIGTALFGTRDYSDK 230
>gi|148544413|ref|YP_001271783.1| alanine racemase domain-containing protein [Lactobacillus reuteri
DSM 20016]
gi|227363162|ref|ZP_03847296.1| TIM-barrel fold protein [Lactobacillus reuteri MM2-3]
gi|325682733|ref|ZP_08162249.1| proline synthetase associated protein [Lactobacillus reuteri
MM4-1A]
gi|148531447|gb|ABQ83446.1| alanine racemase domain protein [Lactobacillus reuteri DSM 20016]
gi|227071768|gb|EEI10057.1| TIM-barrel fold protein [Lactobacillus reuteri MM2-3]
gi|324977083|gb|EGC14034.1| proline synthetase associated protein [Lactobacillus reuteri
MM4-1A]
Length = 235
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 18/177 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP---LKV 85
LP DI W+ +GHLQ NK K + V M++ V + K+ N ++K GRK + +
Sbjct: 68 LPADINWYMIGHLQRNKVKYIADYVT---MIQSVDSLKLMNTIEKE----GRKHDRIIPI 120
Query: 86 LVQVNTSGEESKSGIDPS--SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
L++VN EESK G+ P+ C+ + E L+ P+++ GLMT Y PE R +
Sbjct: 121 LIEVNVGEEESKFGVKPTLQDCMELAE-ASLQLPHVKLRGLMTSA--PYYDDPEKTRPIF 177
Query: 144 NCRAEVCKALGMAEDQCEL---SMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
E+ + DQ +L SMGM+ D+E A+E GST VR+G+ IFGPR+Y+ +Q
Sbjct: 178 RRLRELRDEMNNQNDQLKLDVLSMGMTHDYEIAVEEGSTCVRVGTAIFGPRDYSNRQ 234
>gi|15605814|ref|NP_213191.1| hypothetical protein aq_274 [Aquifex aeolicus VF5]
gi|6226352|sp|O66631.1|Y274_AQUAE RecName: Full=UPF0001 protein aq_274
gi|2982978|gb|AAC06592.1| hypothetical protein aq_274 [Aquifex aeolicus VF5]
Length = 228
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 19/179 (10%)
Query: 23 FIDKYNLPEDI--KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV--SNL 78
F+ KY +D+ +WHF+G LQ+NK K L+G V ++ + + +A+ + K +N+
Sbjct: 61 FLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKVV---LIHSLDRKNLADEIQKRAFKNNI 117
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ VL++VN GEE+K G++P + + E+ L PN++ GLMTI P Y PE+
Sbjct: 118 VQD---VLIEVNVGGEETKGGVEPENLKELFEYT-LELPNVKVLGLMTI--PPYLENPED 171
Query: 139 ----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
FR L R E+ + +A LSMGMS DFE AIE G+T VRIG+ +FG R+Y
Sbjct: 172 VRPYFRKLRELRDELQREYNVALPH--LSMGMSHDFEVAIEEGATIVRIGTLLFGERKY 228
>gi|403379011|ref|ZP_10921068.1| alanine racemase domain-containing protein [Paenibacillus sp. JC66]
Length = 232
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 11/166 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
N D++WHF+GHLQ+NK K ++G + ++ + +A ++K S + K +K L+
Sbjct: 70 NEQHDVEWHFIGHLQTNKVKDVIGKFAYIHSLDRLS---LAKEINKRASGMENK-IKCLI 125
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLL 143
Q+N SGE+SK G++P E VR P +E GLMT M + S PE FR L
Sbjct: 126 QLNISGEDSKYGLNPDELFSFAEQVR-EYPAIEICGLMT--MAPFESEPEQTRPVFRRLR 182
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
R E+ + + + ELSMGMS DFE A+E G+T VR+GS + G
Sbjct: 183 ELRDELNERAILDKPVTELSMGMSNDFEVAVEEGATWVRLGSLLVG 228
>gi|367015344|ref|XP_003682171.1| hypothetical protein TDEL_0F01490 [Torulaspora delbrueckii]
gi|359749833|emb|CCE92960.1| hypothetical protein TDEL_0F01490 [Torulaspora delbrueckii]
Length = 259
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 101/175 (57%), Gaps = 18/175 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA--VSNLGRKPLKVL 86
LP DI+WHF+G LQ+NK K L VPNL VE + + K A L++A N KP+
Sbjct: 82 LPSDIQWHFIGGLQTNKCKDL-AKVPNLSFVETIDSLKKAKKLNEARLKFNPDAKPVACN 140
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL----RCPNLEFSGLMTIGMPDYTSTPE----- 137
+Q+NTS EE KSG+ I E VR ++ +GLMTIG D + + +
Sbjct: 141 IQINTSSEEQKSGLQNEE--EIFEVVRYFLNQDTKHITLNGLMTIGSWDTSHSNDPNEEN 198
Query: 138 -NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+F+TL++ + ++ + + +LSMGMS DF+QAI G++ VRIG+ IFG R
Sbjct: 199 ADFKTLVSWKNKIDAQF---DTELKLSMGMSSDFQQAIHQGTSEVRIGTDIFGAR 250
>gi|417842523|ref|ZP_12488605.1| UPF0001 protein [Haemophilus haemolyticus M21127]
gi|341951361|gb|EGT77933.1| UPF0001 protein [Haemophilus haemolyticus M21127]
Length = 233
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+QVN
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + E FR + + ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLRLRGLMAIPAPTDKIAEQEAVFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D + AI+ GST VRIG+ IFG R+Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMQSAIKCGSTMVRIGTAIFGARDYSK 233
>gi|46143323|ref|ZP_00135498.2| COG0325: Predicted enzyme with a TIM-barrel fold [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207540|ref|YP_001052765.1| hypothetical protein APL_0052 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|307256072|ref|ZP_07537860.1| hypothetical protein appser10_780 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|126096332|gb|ABN73160.1| hypothetical protein APL_0052 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306865494|gb|EFM97389.1| hypothetical protein appser10_780 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 231
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 98/182 (53%), Gaps = 18/182 (9%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L A +
Sbjct: 62 KIAYFAQQPNL----EWHFIGALQSNKTRLV---AENFDWIQTVDRLKIAERL-SAQRSA 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E SKSGI P + + + + PNL GLM I P+ S PE
Sbjct: 114 NKAPLNVLIQINISDEASKSGIQPEELDELAKAIS-QLPNLRLRGLMAIPKPE--SEPEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ L ++ L +D+ E LSMGMS D AIE GST VRIG+ IFG R+Y+
Sbjct: 171 QKIALRKMQQLFDRL---QDEFEGIDTLSMGMSDDMAAAIECGSTMVRIGTAIFGARDYS 227
Query: 195 KK 196
K
Sbjct: 228 AK 229
>gi|313886741|ref|ZP_07820448.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923782|gb|EFR34584.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas
asaccharolytica PR426713P-I]
Length = 221
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+G LQ NK K + VP + ++E V +E + + K + R+ L++L+
Sbjct: 56 QLPEDIQWHFIGTLQRNKVKYI---VPYVSLIESVDSEALLQEIVKQANRFDRQ-LRILL 111
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCP----NLEFSGLMTIGMPDYTSTPENFRTLL 143
Q + EESKSG+D + L +V+H L P + GLM GM T+ E R
Sbjct: 112 QYKIAQEESKSGLDHAELLALVDHY-LATPEWRERITVCGLM--GMATLTADKEQIRHEF 168
Query: 144 NCRAEVCKALGMAEDQC---ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + L Q ELSMGMS D+ A+E GST VRIG+ IFG R+Y
Sbjct: 169 DTLRALQTELRERYPQISWNELSMGMSSDWPIAVETGSTIVRIGTAIFGERQY 221
>gi|189500708|ref|YP_001960178.1| alanine racemase domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496149|gb|ACE04697.1| alanine racemase domain protein [Chlorobium phaeobacteroides BS1]
Length = 229
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 23 FIDKYN------LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
F++KY+ LP I+WHF+GHLQSNK K + V ++ + K A L K S
Sbjct: 62 FLEKYSSDHLSGLP--IRWHFIGHLQSNKVKDI---VDKTYLIHSIDKLKTAEELSKLAS 116
Query: 77 NLGRKPLKV--LVQVNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIGMPDYT 133
RK L L++VNTSGE +K G+ P + L +E RL PN+ GLMTI PD
Sbjct: 117 ---RKNLTADYLIEVNTSGEATKFGLSPETLL--LETSRLFTLPNIRLKGLMTIASPDRN 171
Query: 134 STPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ FR L ++ + ELSMGMS DF+ AIE G+T +RIG+ IFG R
Sbjct: 172 KARKEFRLLGELLEKLRETSPDPSSLTELSMGMSQDFDIAIEEGATIIRIGTAIFGSR 229
>gi|262379205|ref|ZP_06072361.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262298662|gb|EEY86575.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 236
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L N D V GV IA L A R L + +QVN
Sbjct: 79 DIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERL-SAQRPEQRAALNICIQVNI 134
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V+ + + PNL GLM I P +T E+ R L N +
Sbjct: 135 DGQESKDGCTPEQVAELVKMIS-QLPNLCLRGLMVIPAPGHTDAFEHTRQLFN-QVRTFH 192
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
A D LSMGMS D E A+ GST VRIG+ +FG R+Y+ K
Sbjct: 193 AHPQVWD--TLSMGMSADLEAAVVAGSTMVRIGTALFGTRDYSDK 235
>gi|406036692|ref|ZP_11044056.1| hypothetical protein AparD1_06957 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 228
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 89/163 (54%), Gaps = 10/163 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+GH+Q NK K L D V GV IA L + RKPL + +QVN
Sbjct: 73 EIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSSQRMD-SRKPLNICIQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V+ + + PN+ GLM I P+ + + +TL E K
Sbjct: 129 DGQDSKDGCQPDEVAELVKQIS-QLPNIRLRGLMVIPAPENSVAFADAKTLF----EQVK 183
Query: 152 AL-GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+L +D LSMGMSGD + AI GST VR+G+ +FG R+Y
Sbjct: 184 SLHARPQDWDTLSMGMSGDLDAAIAAGSTMVRVGTALFGARDY 226
>gi|255319900|ref|ZP_05361101.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens SK82]
gi|255303033|gb|EET82249.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens SK82]
Length = 231
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L N D V GV IA L A R L + +QVN
Sbjct: 74 DIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERL-SAQRPEQRAALNICIQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V+ + + PNL GLM I P +T E+ R L N +
Sbjct: 130 DGQESKDGCTPEQVAELVKMIS-QLPNLCLRGLMVIPAPGHTDAFEHTRQLFN-QVRTFH 187
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
A D LSMGMS D E A+ GST VRIG+ +FG R+Y+ K
Sbjct: 188 AHPQVWD--TLSMGMSADLEAAVVAGSTMVRIGTALFGTRDYSDK 230
>gi|359300560|ref|ZP_09186399.1| hypothetical protein Haemo_10429 [Haemophilus [parainfluenzae] CCUG
13788]
gi|402304788|ref|ZP_10823852.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sputorum HK
2154]
gi|400377195|gb|EJP30075.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sputorum HK
2154]
Length = 231
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 95/174 (54%), Gaps = 8/174 (4%)
Query: 24 IDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
I +N D++WHF+G LQSNK K + + D ++ V KIA L + + PL
Sbjct: 63 IAYFNQQTDLEWHFIGPLQSNKTKLVAA---HFDWIQTVDRLKIAQRLSEQ-RPADKAPL 118
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
VL+Q+N S E SKSGI P L + + + L PNL+ GLM I P++ P + L
Sbjct: 119 NVLIQINISDEASKSGIAPEEMLPLAKEIAL-LPNLKLRGLMAIPKPEHE--PAQQKIAL 175
Query: 144 NCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ ++ L + + LSMGMS D AIE GST VRIG+ +FG R+Y K
Sbjct: 176 SKMQQLFNRLQTEFEGIDTLSMGMSDDMAAAIECGSTMVRIGTAVFGARDYGVK 229
>gi|429862489|gb|ELA37137.1| alanine racemase family protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 288
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 96/175 (54%), Gaps = 14/175 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-----GRKPL 83
LP I+WHF+G LQS AK L +PNL V V K A L+ + + L PL
Sbjct: 106 LPRSIQWHFIGGLQSTHAKKL-AKIPNLFCVSSVDTLKKAQLLNTSRAELIASSPDAAPL 164
Query: 84 KVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN-- 138
+ VQVNTSGEESKSG P + + V CP+L GLMTIG +TPEN
Sbjct: 165 GIHVQVNTSGEESKSGASPGEETVALCRAVENDCPSLRLLGLMTIGAIARSKATTPENEN 224
Query: 139 --FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L R V K L E + ELSMGMS DFE A+ +GS VR+GSTIFG R
Sbjct: 225 EDFLCLREQRDLVTKEL-GLERELELSMGMSEDFEGAVRLGSGEVRVGSTIFGER 278
>gi|386811248|ref|ZP_10098474.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386405972|dbj|GAB61355.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 249
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 11/165 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
ED +WHF+GHLQ+NK K +L DM+ V + LD + GR + +L+QVN
Sbjct: 71 EDAEWHFIGHLQTNKIKDVLKFA---DMIHSVDRLPLVEKLDHRLQQEGR-SMDILIQVN 126
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
TS EESK GI P + +V+ + L+ GLMTIG+ +T R E+
Sbjct: 127 TSHEESKYGIAPEEAISLVKQT-AKYETLKIYGLMTIGL--FTKDEIKIRACFKVLKEIH 183
Query: 151 KAL---GMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
A+ G+ Q + LSMGMSGD++ AIE G+ VRIG+ IFG R
Sbjct: 184 DAIIKEGIGRVQMKYLSMGMSGDYQIAIEEGANMVRIGTAIFGAR 228
>gi|423685143|ref|ZP_17659951.1| hypothetical protein VFSR5_0417 [Vibrio fischeri SR5]
gi|371495644|gb|EHN71239.1| hypothetical protein VFSR5_0417 [Vibrio fischeri SR5]
Length = 236
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 12/188 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + I+ +++ K + ++WHF+G +QSNK + + + D V V KIA L
Sbjct: 58 YVQEGIEKVQYFQKQHPTTSLEWHFIGPIQSNKTRPI---AEHFDWVHSVERLKIAQRLN 114
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GM 129
D+ S LG L VL+QVNTS EESKSG + + + + PNL GLM+I +
Sbjct: 115 DQRPSELGE--LNVLIQVNTSSEESKSGTTAEEVMELAAAIN-KMPNLTLRGLMSIPANV 171
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
+Y F+ L + + ++ + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 172 SNYAEQLAAFKQLTSIQNQLRAQYPQVDT---LSMGMSGDMDAAIEAGSTMVRIGTAIFG 228
Query: 190 PREYAKKQ 197
R+Y K+
Sbjct: 229 ARDYKNKE 236
>gi|448080130|ref|XP_004194549.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
gi|359375971|emb|CCE86553.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
Length = 298
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DIKWHF+G LQ+ K K L +PNL VE V K L+ + ++V +Q
Sbjct: 128 LPVDIKWHFIGGLQTGKCKDLSKNIPNLYSVEAVDTLKKCQKLNDTRKSANGSVIEVYLQ 187
Query: 89 VNTSGEESKSGI---DPSSCLGIVEH-VRLRCPNLEFSGLMTIG-MPDYTSTPEN--FRT 141
+NTSGEE KSG D S L +E+ + ++ GLMTIG + S EN F+
Sbjct: 188 INTSGEEQKSGFSLQDKSELLATIEYFMSGDASHVHLKGLMTIGSFSESLSGEENSDFKK 247
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L + ++E+ + + + ELSMGMS DF+ AI GS VR+G++IFG R
Sbjct: 248 LRDIKSELDEKFNL---KLELSMGMSNDFKDAIIQGSNEVRVGTSIFGTR 294
>gi|332300649|ref|YP_004442570.1| hypothetical protein Poras_1469 [Porphyromonas asaccharolytica DSM
20707]
gi|332177712|gb|AEE13402.1| protein of unknown function UPF0001 [Porphyromonas asaccharolytica
DSM 20707]
Length = 221
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 18/175 (10%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+G LQ NK K + VP + ++E V +E + + K + R+ L++L+
Sbjct: 56 QLPEDIQWHFIGTLQRNKVKYI---VPYVSLIESVDSEALLQEIVKQANRFDRQ-LRILL 111
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPN----LEFSGLMTIGMPDYTSTPENFR--- 140
Q + EESKSG+D + L +V+H L P + GLM GM T+ E R
Sbjct: 112 QYKIAQEESKSGLDHTELLALVDHY-LATPEWRERITICGLM--GMATLTADKEQIRHEF 168
Query: 141 -TLLNCRAEVCKAL-GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
TL + E+ + ++ D ELSMGMS D+ A+E GST VRIG+ IFG R+Y
Sbjct: 169 DTLRALQTELRERYPEISWD--ELSMGMSSDWPLAVEAGSTIVRIGTAIFGERQY 221
>gi|59711037|ref|YP_203813.1| hypothetical protein VF_0430 [Vibrio fischeri ES114]
gi|59479138|gb|AAW84925.1| predicted enzyme [Vibrio fischeri ES114]
Length = 236
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 12/188 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + I+ +++ K + ++WHF+G +QSNK + + + D V V KIA L
Sbjct: 58 YVQEGIEKVQYFQKQHSTTSLEWHFIGPIQSNKTRPI---AEHFDWVHSVERLKIAQRLN 114
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GM 129
D+ S LG L VL+QVNTS EESKSG + + + + PNL GLM+I +
Sbjct: 115 DQRPSELGE--LNVLIQVNTSSEESKSGTTAEEVMELAAAIN-KMPNLTLRGLMSIPANV 171
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
+Y F+ L + + ++ + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 172 SNYAEQLAAFKQLTSIQNQLRAQYPQIDT---LSMGMSGDMDAAIEAGSTMVRIGTAIFG 228
Query: 190 PREYAKKQ 197
R+Y K+
Sbjct: 229 ARDYKNKE 236
>gi|429747939|ref|ZP_19281171.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 380 str. F0488]
gi|429161970|gb|EKY04332.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 380 str. F0488]
Length = 241
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 96/163 (58%), Gaps = 12/163 (7%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L +++ G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKDILRY--EVSCVESVDRLDLAQKLHNRLASEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
SK G DPS L +V+ V P L GLMTIG+ +++ E F+ L + + E+
Sbjct: 134 SKFGADPSEVLNLVKQVA-TMPTLHIKGLMTIGL--FSAETEKVRACFKLLKHLQQEII- 189
Query: 152 ALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 190 ALNLPNVDPRELSMGMSGDLETAIEEGATIVRVGTAIFGQRIY 232
>gi|228471405|ref|ZP_04056200.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas uenonis
60-3]
gi|228306779|gb|EEK15905.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas uenonis
60-3]
Length = 221
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 18/175 (10%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LPEDI+WHF+G LQ NK K + VP + ++E V +E + + K + R+ L++L+
Sbjct: 56 QLPEDIQWHFIGTLQRNKVKYI---VPYVSLIESVDSESLLQEIVKQANRFDRQ-LRILL 111
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPN----LEFSGLMTIGMPDYTSTPEN----F 139
Q + EESKSG+D + L +V+H L P + GLM GM T+ E F
Sbjct: 112 QYKIAQEESKSGLDHAELLALVDHY-LATPEWRERITICGLM--GMATLTADKEQVRHEF 168
Query: 140 RTLLNCRAEVCKAL-GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
TL + E+ + ++ D ELSMGMS D+ A+E GST VRIG+ IFG R+Y
Sbjct: 169 DTLRALQTELRERYPDISWD--ELSMGMSNDWPLAVEAGSTIVRIGTAIFGERQY 221
>gi|269101814|ref|ZP_06154511.1| hypothetical protein VDA_001230 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161712|gb|EEZ40208.1| hypothetical protein VDA_001230 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 233
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
+ WHF+G LQSNK++ + N D V V KIA L D+ ++L PL VL+Q+NT
Sbjct: 78 LTWHFIGPLQSNKSRPV---AENFDWVHSVDRLKIAQRLNDQRPTDL--PPLNVLLQINT 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEV 149
SGE SKSG+D + V + PNL GLM+I DY S FR+L A+
Sbjct: 133 SGEASKSGLDFEQVAELANQV-AQMPNLVLRGLMSIPEQADDYESQLAAFRSL----AQA 187
Query: 150 CKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ L Q + LSMGMSGD + AI GST VRIG+ IFG R Y
Sbjct: 188 LEQLKPLHPQLDTLSMGMSGDMDAAIAAGSTIVRIGTAIFGARNY 232
>gi|121535248|ref|ZP_01667062.1| alanine racemase domain protein [Thermosinus carboxydivorans Nor1]
gi|121306133|gb|EAX47061.1| alanine racemase domain protein [Thermosinus carboxydivorans Nor1]
Length = 240
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 21/175 (12%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+L ++WH +GHLQ+NK + V D++ V +E++A +D+A + +G++ +L+
Sbjct: 71 SLDRTVEWHLIGHLQTNKVRQ---AVSLFDLIHSVDSERLAREIDRAAAKIGKRQ-NILL 126
Query: 88 QVNTSGEESKSGIDPSSCLGI------VEHVRLRCPNLEFSGLMTIG--MPDYTSTPENF 139
QVN +GEE+K G+ P + + +EHVRL C GLMTI D T F
Sbjct: 127 QVNVAGEETKFGVSPREAIVLARLVAGLEHVRL-C------GLMTIAPFFDDAEMTRPVF 179
Query: 140 RTLLNCRAEVCKALGM-AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R L E+ KAL + D LSMGM+ D+ A+E G+ VRIG+ IFGPR+Y
Sbjct: 180 RELYQIYCEL-KALNLPGSDIKWLSMGMTNDYTVAVEEGANLVRIGTGIFGPRQY 233
>gi|407692974|ref|YP_006817763.1| hypothetical protein ASU2_06930 [Actinobacillus suis H91-0380]
gi|407389031|gb|AFU19524.1| hypothetical protein ASU2_06930 [Actinobacillus suis H91-0380]
Length = 231
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L+ A
Sbjct: 62 KIAYFAQQPNL----EWHFIGPLQSNKTRLV---AENFDWIQTVDRLKIAERLN-AQRPA 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E+SKSGI P + + + + PNL GLM I P+ S E
Sbjct: 114 NKAPLNVLIQINISDEQSKSGIQPEELDELAKAIS-QLPNLRLRGLMAIPKPE--SEAEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ L ++ L A + + LSMGMS D + AIE GST VRIG+ IFG R+Y+ K
Sbjct: 171 QKIALRKMQQLFDRLQAAFEGIDTLSMGMSDDMQSAIECGSTMVRIGTAIFGARDYSAK 229
>gi|376260956|ref|YP_005147676.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. BNL1100]
gi|373944950|gb|AEY65871.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. BNL1100]
Length = 235
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
++ ++KY E IKWH +GHLQ+NK K ++ V M+ V + ++A +D
Sbjct: 60 RVQELLEKYEKFDESIKWHLIGHLQTNKVKYIIDKVH---MIHSVDSFELAKEIDNRAGK 116
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
G+K + VL+QVN SGEE+K GI P VE++ + NL G+MTI P +T E
Sbjct: 117 AGKK-MNVLLQVNVSGEETKFGIRPEEVNAYVEYIS-QLENLSLRGMMTIA-PFADNTQE 173
Query: 138 N---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ LSMGMS DFE AIE G+ VRIG+ IFG R Y
Sbjct: 174 IRPIFKNLYDIFIDIKNKRIDNVSMDYLSMGMSNDFEVAIEEGANLVRIGTGIFGKRNYP 233
Query: 195 KK 196
+K
Sbjct: 234 QK 235
>gi|429756751|ref|ZP_19289333.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 324 str. F0483]
gi|429170512|gb|EKY12183.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 324 str. F0483]
Length = 241
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L + + G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKDILRY--EVSCVESVDRLDLAQKLHNRLESEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
SK G DPS L +V+ V P L GLMTIG+ +++ E F+ L + + E+
Sbjct: 134 SKFGADPSEVLNLVKQVA-TLPTLHIKGLMTIGL--FSAETEKVRACFKLLKHLQQEII- 189
Query: 152 ALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 190 ALNLPNVDPRELSMGMSGDLETAIEEGATIVRVGTAIFGKRIY 232
>gi|256819743|ref|YP_003141022.1| alanine racemase domain-containing protein [Capnocytophaga ochracea
DSM 7271]
gi|256581326|gb|ACU92461.1| alanine racemase domain protein [Capnocytophaga ochracea DSM 7271]
Length = 241
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L + + G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKDILRY--EVSCVESVDRLDLAQKLHNRLESEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
SK G DPS L +V+ V P L GLMTIG+ +++ E F+ L + + E+
Sbjct: 134 SKFGADPSEVLNLVKQVA-TLPTLHIKGLMTIGL--FSAETEKVRACFKLLKHLQQEII- 189
Query: 152 ALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 190 ALNLPNVDPRELSMGMSGDLETAIEEGATIVRVGTAIFGKRIY 232
>gi|421656592|ref|ZP_16096897.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-72]
gi|408504919|gb|EKK06649.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-72]
Length = 230
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFADAKKLFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|403051623|ref|ZP_10906107.1| hypothetical protein AberL1_08767 [Acinetobacter bereziniae LMG
1003]
Length = 231
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L V GV IA L K ++ + PL + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFAWVHGVDRFIIAERLSKQ-RDVTQDPLNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
++SK G P + +V+ + L P+L GLM I P +T ++ + L + +V
Sbjct: 129 DAQDSKDGCQPDEVVELVKQISL-LPHLRLRGLMVIPAPHHTEAFQDAKQLFD---QVKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQ 198
ED LSMGMSGD +AI GST VRIG+ +FG R+Y+ K +
Sbjct: 185 FHVRPEDWDTLSMGMSGDLVEAIAAGSTMVRIGTALFGARDYSTKNE 231
>gi|347755031|ref|YP_004862595.1| pyridoxal phosphate enzyme, YggS family [Candidatus
Chloracidobacterium thermophilum B]
gi|347587549|gb|AEP12079.1| pyridoxal phosphate enzyme, YggS family [Candidatus
Chloracidobacterium thermophilum B]
Length = 233
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 93/167 (55%), Gaps = 10/167 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+ P ++WH +GHLQSNKAK V + ++ V + +A LD+ ++ +K VL+
Sbjct: 74 HAPPQLRWHLIGHLQSNKAKP---AVEHFHLIHTVDSPALAQRLDR-LAQERQKTQPVLL 129
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QV E +KSG+ P++ + VR PNL GLMTI P + PE R
Sbjct: 130 QVKLGDEATKSGVAPTALPALYAAVRA-LPNLRVCGLMTI--PPFCPDPEAVRPYFRHLR 186
Query: 148 EVCKALGMA---EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ AL A +D ELSMGMS DFE A+E G+T +R+G+ IFG R
Sbjct: 187 ELRDALQAAFPSDDLPELSMGMSHDFEVAVEEGATLIRVGTAIFGDR 233
>gi|78059216|gb|ABB17984.1| conserved hypothetical protein [Aggregatibacter aphrophilus]
Length = 234
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ ++++ ++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQYCQQHDV--SLEWHFIGPLQSNKTRLV---AEYFDWMQTLERAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+Q+N S E SKSGI PS L + +H+ P+L GLM I P
Sbjct: 113 EQRSPY-KAPLNVLIQINISQESSKSGIQPSDMLPLAKHIE-NLPHLRLRGLMAIPEPTN 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + ++ +AL A+ LSMGM+ D + AI+ GST VRIG+ IFG
Sbjct: 171 DVAQQEQTFCQMKTLFEQLQQALPNAQIDT-LSMGMTDDMQSAIKCGSTMVRIGTAIFGT 229
Query: 191 REYAK 195
R+YAK
Sbjct: 230 RDYAK 234
>gi|298373203|ref|ZP_06983193.1| pyridoxal phosphate enzyme, YggS family [Bacteroidetes oral taxon
274 str. F0058]
gi|298276107|gb|EFI17658.1| pyridoxal phosphate enzyme, YggS family [Bacteroidetes oral taxon
274 str. F0058]
Length = 225
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 97/174 (55%), Gaps = 16/174 (9%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
NLP+DI+WHF+G LQ+NK K + VP + +++ V N + + K + + R+ + +L+
Sbjct: 56 NLPKDIRWHFIGPLQTNKIKYI---VPFVHLIQSVENMRQMAEIQKCAARIERR-VSILL 111
Query: 88 QVNTSGEESKSGIDPSSCLGIV-EHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLN 144
+++ + EE K G S L E L+ PN++ G+MTI D E F
Sbjct: 112 EIHIAQEEQKHGFSQSELLEFFGEKTYLQYPNIKICGIMTIATLTDDQKQISEEF----- 166
Query: 145 CRA----EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
RA E KA+ D C+LS+GMS D+ AIE GST VRIGS IFG R Y+
Sbjct: 167 ARAKGIFESVKAIYPDSDFCQLSIGMSDDYRLAIEQGSTMVRIGSKIFGQRIYS 220
>gi|404495756|ref|YP_006719862.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
metallireducens GS-15]
gi|418066402|ref|ZP_12703766.1| alanine racemase domain protein [Geobacter metallireducens RCH3]
gi|78193371|gb|ABB31138.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
metallireducens GS-15]
gi|373560663|gb|EHP86920.1| alanine racemase domain protein [Geobacter metallireducens RCH3]
Length = 231
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 95/171 (55%), Gaps = 15/171 (8%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E ++WHF+G LQSNK + + G V M+ V +A +++ + L VL+QVN
Sbjct: 70 EPVEWHFIGALQSNKVRQIAGLV---TMIHSVDRLSLAQEIERQWAKLD-TTCDVLIQVN 125
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCR 146
+GE +KSG L +V V L P+L GLMT MP + PE FR L
Sbjct: 126 IAGEATKSGTTAGELLTLVREVAL-LPHLRVRGLMT--MPPFFDDPEGARPYFRELKRLA 182
Query: 147 AEVCKA--LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
V A G+ D ELSMGMSGDFE A+E G+T VRIG+++FG REY +
Sbjct: 183 GVVAAAGIPGVVMD--ELSMGMSGDFEAAVEEGATLVRIGTSLFGEREYRR 231
>gi|399023674|ref|ZP_10725729.1| pyridoxal phosphate enzyme, YggS family [Chryseobacterium sp.
CF314]
gi|398082373|gb|EJL73127.1| pyridoxal phosphate enzyme, YggS family [Chryseobacterium sp.
CF314]
Length = 219
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 106/179 (59%), Gaps = 10/179 (5%)
Query: 19 KLLRFIDKYNL-PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ ++KY L P+DI+WH +GHLQ+NK K + +D ++ V +EK+ ++K
Sbjct: 47 KVQELMEKYPLLPKDIQWHLIGHLQTNKVKYI---TEFIDTIQSVDSEKLLLEVNKEAGK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVE-HVRLRCPNLEFSGLMTIGMPDYTSTP 136
RK +KVL+QV + EESK G++ S + + +V P+++ +GLM GM +T
Sbjct: 104 HQRK-IKVLLQVKIAAEESKFGLEISEAKDLYQKYVNGSFPHIDITGLM--GMATFTDNR 160
Query: 137 ENFRT-LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ + LN + +V L ++ LSMGMS DF AIE G+ SVR+GS IFG R+Y+
Sbjct: 161 DQIKKEFLNLK-KVFDELNQLKEINTLSMGMSDDFPIAIECGANSVRVGSAIFGRRDYS 218
>gi|297568540|ref|YP_003689884.1| alanine racemase domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924455|gb|ADH85265.1| alanine racemase domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 250
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 89/166 (53%), Gaps = 11/166 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
++ WHF+GHLQSNKAK + MVE + K+A LD+ + GR L VLVQVN
Sbjct: 91 EVSWHFIGHLQSNKAKA--AATTDFTMVETIDRLKLARALDRHAAAAGRL-LPVLVQVNV 147
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR---TLLNCRAE 148
GE K+G+ P ++ + P L GLMT MP + PE R L AE
Sbjct: 148 GGEAQKAGVMPEQAPELLRSL-AELPALRVMGLMT--MPPMAAHPEESRPHFARLRQLAE 204
Query: 149 VCKALGM--AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
G+ A LSMGMS DFE A+E G+ VR+G+ IFGPR+
Sbjct: 205 EFARQGLLGAHGSPLLSMGMSADFEVAVEEGANLVRVGTAIFGPRQ 250
>gi|228472644|ref|ZP_04057404.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga gingivalis
ATCC 33624]
gi|228276057|gb|EEK14813.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga gingivalis
ATCC 33624]
Length = 243
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 95/162 (58%), Gaps = 10/162 (6%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L ++ VE + +A L + +S GR+ + V +QVNTSGEE
Sbjct: 77 HFIGHLQTNKIKDILKY--DVSCVESLDRYDLAEKLHQKLSQAGRE-MDVFIQVNTSGEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR---TLLNCRAEVCKA 152
SK G+ P L + + V + P L GLMTIG+ +++ + R LL + A
Sbjct: 134 SKFGVAPEEALALTQQVA-QLPTLHIRGLMTIGL--FSAEEDKVRKCFQLLKSIQQQIFA 190
Query: 153 LGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
L + + Q ELSMGMSGD E AI G+T VR+G+ IFG R Y
Sbjct: 191 LNLPDVQPHELSMGMSGDLEVAIAEGATIVRVGTAIFGQRIY 232
>gi|386390335|ref|ZP_10075126.1| pyridoxal phosphate enzyme, YggS family [Haemophilus
paraphrohaemolyticus HK411]
gi|385693370|gb|EIG24019.1| pyridoxal phosphate enzyme, YggS family [Haemophilus
paraphrohaemolyticus HK411]
Length = 229
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 93/169 (55%), Gaps = 16/169 (9%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
I+WHF+G LQSNK++ + N D ++ V KIA L D+ +L PL VL+Q+N
Sbjct: 72 IEWHFIGPLQSNKSRLV---AENFDWIQTVDRLKIAERLNDQRPEHL--PPLNVLIQINI 126
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
S E SKSGI P L E + + P L GLM I P+ S PE + L E+
Sbjct: 127 SDEVSKSGIQPEEMLLFAEKIS-QLPRLRLRGLMAIPKPE--SGPEQQKIALRKMKELLD 183
Query: 152 ALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L + Q E LSMGMS D AIE GST VRIG+ IFG R+Y K+
Sbjct: 184 RL---QQQFEGIDTLSMGMSDDMASAIECGSTMVRIGTAIFGARDYNKQ 229
>gi|419839787|ref|ZP_14363189.1| pyridoxal phosphate enzyme, YggS family [Haemophilus haemolyticus
HK386]
gi|386909063|gb|EIJ73744.1| pyridoxal phosphate enzyme, YggS family [Haemophilus haemolyticus
HK386]
Length = 233
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + E FR + + ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLRLRGLMAIPAPTDKIAEQEAVFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D AI+ GST VRIG+ IFG R+Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARDYSK 233
>gi|421465927|ref|ZP_15914614.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens WC-A-157]
gi|400204194|gb|EJO35179.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens WC-A-157]
Length = 231
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L N D V GV IA L A R L + +QVN
Sbjct: 74 DIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERL-SAQRPEQRAALNICIQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V+ + + PNL GLM I P +T E+ + L N +
Sbjct: 130 DGQESKDGCSPEQVAELVKMIS-QLPNLCLRGLMVIPAPGHTDAFEHTQQLFN-QVRTFH 187
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
A D LSMGMS D E A+ GST VRIG+ +FG R+Y+ K
Sbjct: 188 AHPQVWD--TLSMGMSADLEAAVVAGSTMVRIGTALFGARDYSDK 230
>gi|393779380|ref|ZP_10367623.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 412 str. F0487]
gi|392610240|gb|EIW93022.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 412 str. F0487]
Length = 241
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L + + G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKDILRY--EVSCVESVDRLDLAQKLHNRLESEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
SK G DPS L +V+ V P L GLMTIG+ +++ E F+ L + + E+
Sbjct: 134 SKFGADPSEVLNLVKQVA-TMPTLHIKGLMTIGL--FSAETEKVRACFKLLKHLQQEII- 189
Query: 152 ALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 190 ALNLPNVDPRELSMGMSGDLETAIEEGATIVRVGTAIFGQRIY 232
>gi|213963787|ref|ZP_03392036.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sputigena
Capno]
gi|213953563|gb|EEB64896.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sputigena
Capno]
Length = 242
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 92/162 (56%), Gaps = 10/162 (6%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L +++ G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKEILRY--EVSCVESVDRLDLAQKLHNRLASEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK---A 152
SK G DPS L +V+ V P L GLMTIG+ +++ E R + + A
Sbjct: 134 SKFGADPSEVLDLVKQVA-TLPTLHIKGLMTIGL--FSAETEKVRACFQLLKRIQQDIIA 190
Query: 153 LGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
L + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 191 LNLPNVDPKELSMGMSGDLETAIEEGATIVRVGTAIFGQRIY 232
>gi|225718710|gb|ACO15201.1| Proline synthetase co-transcribed bacterial homolog protein
[Caligus clemensi]
Length = 248
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I WHF+G LQS LL V NL ++ + + +A+ L A L VLVQVN
Sbjct: 87 EISWHFIGSLQSKNVSKLLK-VRNLSVLHTLSSRSLADKLQNATQARDIPSLSVLVQVNV 145
Query: 92 SGEESKSGID-PSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
SGE +K G+ +V ++ CP L F GLM IG P +F + + R +V
Sbjct: 146 SGEANKGGVAFGPEVSALVSYILSSCPRLHFLGLMAIGAPGEEKA--DFSRMRDLRRDVA 203
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ G+ E+ LS+GMSGD E A+E GST +R+G IFG R
Sbjct: 204 QEHGINEESLRLSIGMSGDMETAVEYGSTDLRMGRQIFGER 244
>gi|326334346|ref|ZP_08200560.1| YggS family pyridoxal phosphate enzyme [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325693505|gb|EGD35430.1| YggS family pyridoxal phosphate enzyme [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 268
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE + +A L + +S +G K + V +QVNTS EE
Sbjct: 102 HFIGHLQTNKIKDILKY--EVSCVESLDRYDLAEKLHQKLSQIG-KQMDVFIQVNTSAEE 158
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
SK G+ P + L +V+ V + P L GLMTIG+ +++ E F+ L N + ++
Sbjct: 159 SKFGVAPENVLELVKQVA-QFPTLHIRGLMTIGL--FSAEQEKVRKCFQLLKNIQQQII- 214
Query: 152 ALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
L + + Q ELSMGMSGDFE AI G+T VR+G+ IFG R Y
Sbjct: 215 TLNLPDVQPKELSMGMSGDFEIAIAEGATIVRVGTAIFGQRIY 257
>gi|50304253|ref|XP_452076.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641208|emb|CAH02469.1| KLLA0B12265p [Kluyveromyces lactis]
Length = 258
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 98/170 (57%), Gaps = 11/170 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS--NLGRKPLKVL 86
LP+DIKWHF+G LQSNK K L + NL VE V + K A L++A N +
Sbjct: 89 LPQDIKWHFIGGLQSNKCKDL-AKIANLYSVETVDSLKKAKKLEEARGKWNPDAPVITCN 147
Query: 87 VQVNTSGEESKSGIDPS-SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST----PENFRT 141
VQ+NTSGEE KSG+ IVE++ ++ +GLMT+G D + + ++F
Sbjct: 148 VQINTSGEEQKSGLFAEVEVYSIVEYLIKEAKHVSLNGLMTVGSWDVSHSGNEENQDFAR 207
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L+ + ++ G+ +LSMGM+ DF QAI+ G++ VRIG+ IFG R
Sbjct: 208 LVEWKKKLDAKYGL---DLKLSMGMTADFRQAIKQGTSEVRIGTAIFGSR 254
>gi|255035572|ref|YP_003086193.1| alanine racemase domain-containing protein [Dyadobacter fermentans
DSM 18053]
gi|254948328|gb|ACT93028.1| alanine racemase domain protein [Dyadobacter fermentans DSM 18053]
Length = 246
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Query: 19 KLLRFIDKYNLPEDI--KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ DKY DI + HF+GHLQ+NK K +L N+ ++ V ++A L++ ++
Sbjct: 59 KVQEIRDKYEALSDIPHQTHFIGHLQTNKIKDVLK--YNVSCIQSVDRLELAEKLEQRLA 116
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
GR + V +QVNTS E SK G+ P + L +V V C +L GLMTIG+ D
Sbjct: 117 FEGRH-MDVFIQVNTSFEGSKFGVAPEAALDLVRQVAC-CGHLHIKGLMTIGLFSADNEQ 174
Query: 135 TPENFRTLLNCRAEVCK----ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ FR L + ++++ +GMAE LSMGMSGD E AI+ G+T VR+G+ IFG
Sbjct: 175 VRKCFRLLKSIQSQIISENIPGVGMAE----LSMGMSGDLETAIQEGATIVRVGTAIFGE 230
Query: 191 REY 193
R Y
Sbjct: 231 RIY 233
>gi|127512070|ref|YP_001093267.1| alanine racemase domain-containing protein [Shewanella loihica
PV-4]
gi|126637365|gb|ABO23008.1| alanine racemase domain protein [Shewanella loihica PV-4]
Length = 233
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 10/166 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
DI+WHF+G LQSNK K++ + D + + EKIA L ++ S+L PL+V +QVN
Sbjct: 75 DIEWHFIGPLQSNKTKSI---AEHFDWMHTLSREKIAKRLSEQRPSHLA--PLQVCIQVN 129
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
S E+SKSG++P + E + P L GLM I P T + + +
Sbjct: 130 VSQEQSKSGVNPDEVAHLAE-IIASLPRLTLRGLMAI--PTATDDVALQQAEFSQMQALF 186
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGMS D EQAI GST VRIGS IFG R+YAK
Sbjct: 187 EALKQQHPSLDTLSMGMSQDLEQAIAAGSTMVRIGSAIFGARDYAK 232
>gi|402814560|ref|ZP_10864154.1| hypothetical protein PAV_2c07060 [Paenibacillus alvei DSM 29]
gi|402508407|gb|EJW18928.1| hypothetical protein PAV_2c07060 [Paenibacillus alvei DSM 29]
Length = 248
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 93/164 (56%), Gaps = 9/164 (5%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ +HF+GHLQ+NK K +L ++ V K+A L + + GR + VL+QVNTS
Sbjct: 78 LDFHFIGHLQTNKVKDVLKFAT---CIQSVDRMKLATALHERLQKEGR-TMDVLIQVNTS 133
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
EESK G P L +++ V + L GLMTIG+ D + F+ L N R E
Sbjct: 134 YEESKFGAAPEDALALIQEV-AKLDTLRIKGLMTIGLFTDDQEKVRKCFKLLQNIRRE-A 191
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ L + E +SMGMSGDFE AIE GST VR+GS IFG R Y
Sbjct: 192 QELALPNVNMEVMSMGMSGDFETAIEEGSTLVRVGSAIFGKRIY 235
>gi|297537837|ref|YP_003673606.1| alanine racemase domain-containing protein [Methylotenera
versatilis 301]
gi|297257184|gb|ADI29029.1| alanine racemase domain protein [Methylotenera versatilis 301]
Length = 240
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGRKPLKVLVQVNT 91
I+WHF+G +QSNK + + N V V KIA L+ A +NL PL+V +QVNT
Sbjct: 76 IEWHFIGPIQSNKTQLI---AQNFAWVHSVDRLKIAQRLNDARPANLA--PLQVCIQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEV 149
S E SKSG+ + + + ++ P L+ GLM I P DY F+ + C +
Sbjct: 131 SNEASKSGVSTNELEALATAI-VKMPRLKLRGLMAIPEPSKDYNQQRSQFKQVRECY-DA 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
A G A D LS+GMS D++ AIE GST VRIGS +FG R Y K
Sbjct: 189 LLAQGFALD--TLSIGMSDDYQAAIEEGSTIVRIGSALFGARTYGNK 233
>gi|147678163|ref|YP_001212378.1| hypothetical protein PTH_1828 [Pelotomaculum thermopropionicum SI]
gi|146274260|dbj|BAF60009.1| predicted enzyme [Pelotomaculum thermopropionicum SI]
Length = 226
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 96/178 (53%), Gaps = 14/178 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
++ F+ KY LP ++WHF+GHLQ+NK K ++G V ++ + +A L +A
Sbjct: 57 RVQEFLQKYGQLPAGVEWHFIGHLQTNKVKKIIGKV---SLIHSLDRWSLAEALSRAACE 113
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
G +VLVQVN +GE++K G+ PS V R P LE GLMTI + E
Sbjct: 114 AG-TAARVLVQVNIAGEKTKYGLLPSETPQFVAEA-ARLPGLEVMGLMTIA--PWCENAE 169
Query: 138 NFRTLLNCRAEVCKAL----GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R + E+ L G+ D LSMGMSGDFE A+E G+ VR+GS IFG R
Sbjct: 170 EVRPVFRQLKELAGKLTGLEGVKMDY--LSMGMSGDFEVAVEEGANIVRVGSAIFGGR 225
>gi|311109274|ref|YP_003982127.1| alanine racemase [Achromobacter xylosoxidans A8]
gi|310763963|gb|ADP19412.1| alanine racemase, N-terminal domain protein 3 [Achromobacter
xylosoxidans A8]
Length = 239
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 94/172 (54%), Gaps = 16/172 (9%)
Query: 33 IKWHFVGHLQSNKAKTLLGG---VPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
++W +GHLQ+NKA+ V +LD VE +A L + ++N GR L VLVQV
Sbjct: 77 LQWVLIGHLQTNKARDAARDAAEVQSLDRVE------LAEALHRRLANEGRT-LDVLVQV 129
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRA 147
TS E SK G+DP+ + + P L GLMT+ + PD FR L R
Sbjct: 130 KTSSEPSKYGMDPADVPAFLRRIATDFPTLRVQGLMTLAVNSPDAAEVRACFRALRELRD 189
Query: 148 EVCK--ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ + G++ D+ LSMGMSGDFE AIE GST VRIGS IFG R Y Q
Sbjct: 190 RLRQENPPGVSLDR--LSMGMSGDFELAIEEGSTEVRIGSAIFGARSYPDPQ 239
>gi|30248969|ref|NP_841039.1| hypothetical protein NE0966 [Nitrosomonas europaea ATCC 19718]
gi|30138586|emb|CAD84877.1| Uncharacterized pyridoxal-5'-phosphate dependent enzyme family
UPF0001 [Nitrosomonas europaea ATCC 19718]
Length = 238
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 14 KKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK 73
++ L+K+ D LP I+WHF+G +QSNK K + N V G+ EKIA L
Sbjct: 60 QEGLVKIRALSD---LP--IEWHFIGPIQSNKTKLI---AENFSWVHGIDREKIATRLSA 111
Query: 74 AVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT 133
A PL+V VQVN SGE +KSG+DP + V P L+ G+M + P+ T
Sbjct: 112 ARPE-SLPPLQVCVQVNVSGEITKSGVDPEKAAELAAFVS-EQPRLQLRGIMAV--PELT 167
Query: 134 STPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ R EV + L + LSMGMS D E AI G+T VRIG+ IFGPR
Sbjct: 168 AVTALQREQFQMMREVYEQLQQQGFNLDTLSMGMSEDLENAIAEGATMVRIGTAIFGPRR 227
Query: 193 YA 194
YA
Sbjct: 228 YA 229
>gi|337286989|ref|YP_004626462.1| alanine racemase domain-containing protein [Thermodesulfatator
indicus DSM 15286]
gi|335359817|gb|AEH45498.1| alanine racemase domain protein [Thermodesulfatator indicus DSM
15286]
Length = 230
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP + WH +G+LQ NKAK L D++E V E IA L+K + L K + V +
Sbjct: 70 DLP--LTWHLIGYLQRNKAKDALK---IFDLIETVDREAIATELEKRAARL-EKVVPVFI 123
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
+VN GEE+K+G+ P +VE V L +L GLMTI P Y PE R
Sbjct: 124 EVNVGGEETKAGVAPEELPALVECV-LGLSHLRLEGLMTI--PPYREDPEEVRPFFVRLR 180
Query: 148 EVCKALGMAEDQC---ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ + L + ELSMGMS DF A+E G+T VR+G+ +FGPR
Sbjct: 181 ELKEDLERRFPEAKFRELSMGMSHDFHVAVEEGATIVRVGTALFGPR 227
>gi|421674918|ref|ZP_16114844.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC065]
gi|421693449|ref|ZP_16133091.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-116]
gi|404557952|gb|EKA63240.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-116]
gi|410382933|gb|EKP35467.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC065]
Length = 230
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTAAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|445446442|ref|ZP_21443320.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-A-92]
gi|444760253|gb|ELW84707.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-A-92]
Length = 230
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKYL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|386774134|ref|ZP_10096512.1| pyridoxal phosphate enzyme, YggS family protein [Brachybacterium
paraconglomeratum LC44]
Length = 243
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 14/166 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--AVSNLGRKPLKVLVQVN 90
+ HF+G LQ+NKA+ ++ ++V V + IA+ L++ +++L R VLVQVN
Sbjct: 86 VPRHFIGRLQTNKARDVIAFA---ELVHSVDRDDIADALERRAELADLRRD---VLVQVN 139
Query: 91 TSGEESKSGIDPS--SCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCR 146
TSGEESK G PS + IVE +R L GLMTIG D T+ + R+L R
Sbjct: 140 TSGEESKGGYGPSLEALAPIVERLR-GSERLRPVGLMTIGANTSDETAVRASLRSLRELR 198
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ + LG+ E ELSMGMSGD E A+E G+T VR+GS +FGPR+
Sbjct: 199 DALRERLGIPE-LTELSMGMSGDLEIAVEEGATIVRVGSALFGPRD 243
>gi|260555789|ref|ZP_05828009.1| TIM-barrel fold family protein [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|260410700|gb|EEX03998.1| TIM-barrel fold family protein [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
Length = 235
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 78 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 134 DGQESKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFADAKKLFDA---VKV 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 190 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 234
>gi|421627336|ref|ZP_16068146.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC098]
gi|408693018|gb|EKL38630.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC098]
Length = 230
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +Q+N
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQINI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFADAKKLFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|319790041|ref|YP_004151674.1| alanine racemase domain protein [Thermovibrio ammonificans HB-1]
gi|317114543|gb|ADU97033.1| alanine racemase domain protein [Thermovibrio ammonificans HB-1]
Length = 228
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
+WH +GHLQ+NK K V D +E V E + L K +S G K + VL++V S
Sbjct: 74 QWHMIGHLQTNKVKY---AVKLFDCIESVDREGLVEELQKRLSREG-KVMPVLIEVKLSP 129
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT----LLNCRAEV 149
EESK G P + E V L PNL+ GLMT+ P Y PE R L R E+
Sbjct: 130 EESKHGCLPQELPRLTEKV-LNSPNLKLKGLMTV--PPYFEDPEKVRPYFAELRRLRDEL 186
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + + ELSMGMS DF A+E G+T VR+G+ IFGPR Y
Sbjct: 187 QEKFKV--ELPELSMGMSHDFPVAVEEGATIVRVGTAIFGPRNY 228
>gi|452126579|ref|ZP_21939162.1| hypothetical protein F783_14239 [Bordetella holmesii F627]
gi|452129956|ref|ZP_21942529.1| hypothetical protein H558_14091 [Bordetella holmesii H558]
gi|451921674|gb|EMD71819.1| hypothetical protein F783_14239 [Bordetella holmesii F627]
gi|451922816|gb|EMD72960.1| hypothetical protein H558_14091 [Bordetella holmesii H558]
Length = 232
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ W +GHLQ+NK K ++ V V+ + ++A+ L + + R L VL+Q+ TS
Sbjct: 75 LSWVMIGHLQTNKVKDVVRDVAE---VQSLDRLELADALQRRLETASRS-LDVLIQIKTS 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E SK G+ P ++ H++ CP L GLMT+ + D + FR L R V
Sbjct: 131 PEPSKFGLPPEELPALLSHLQQSCPALRVQGLMTMAIHSEDSAAVRACFRRLRKLRDAVA 190
Query: 151 KA-LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L MA LSMGMS DFE AIE GST +RIGST+FG R YA
Sbjct: 191 TPQLPMAR----LSMGMSADFELAIEEGSTEIRIGSTLFGARHYA 231
>gi|417544317|ref|ZP_12195403.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC032]
gi|421666933|ref|ZP_16107015.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC087]
gi|421670780|ref|ZP_16110764.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC099]
gi|400382205|gb|EJP40883.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC032]
gi|410383660|gb|EKP36187.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC099]
gi|410386405|gb|EKP38876.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC087]
gi|452954207|gb|EME59611.1| hypothetical protein G347_02875 [Acinetobacter baumannii MSP4-16]
Length = 230
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|227544397|ref|ZP_03974446.1| TIM-barrel fold protein [Lactobacillus reuteri CF48-3A]
gi|338202552|ref|YP_004648697.1| proline synthetase associated protein [Lactobacillus reuteri
SD2112]
gi|227185660|gb|EEI65731.1| TIM-barrel fold protein [Lactobacillus reuteri CF48-3A]
gi|336447792|gb|AEI56407.1| proline synthetase associated protein [Lactobacillus reuteri
SD2112]
Length = 235
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 98/177 (55%), Gaps = 18/177 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP---LKV 85
LP DI W+ +GHLQ NK K + V M++ V + K+ K + GRK + +
Sbjct: 68 LPADINWYMIGHLQRNKVKYIADYVT---MIQSVDSLKLM----KTIEKEGRKHNRIIPI 120
Query: 86 LVQVNTSGEESKSGIDPS--SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
L++VN EESK G+ P+ C+ + E L+ P+++ GLMT Y PE R +
Sbjct: 121 LIEVNVGEEESKFGVKPTLQDCMELAE-ASLQLPHVKLRGLMTSA--PYYDDPEKTRPIF 177
Query: 144 NCRAEVCKALGMAEDQCEL---SMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
E+ + DQ +L SMGM+ D+E A+E GST VR+G+ IFGPR+Y+ +Q
Sbjct: 178 RRLHELRDEMNNQNDQLKLDVLSMGMTHDYEIAVEEGSTCVRVGTAIFGPRDYSNRQ 234
>gi|260913719|ref|ZP_05920195.1| YggS family pyridoxal phosphate enzyme [Pasteurella dagmatis ATCC
43325]
gi|260632258|gb|EEX50433.1| YggS family pyridoxal phosphate enzyme [Pasteurella dagmatis ATCC
43325]
Length = 233
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + I + + + N+ +++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 57 YVQEGIDKIAYFQQQNI--ELEWHFIGPLQSNKTRLV---AEHFDWMQTLDRIKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + PL VL+Q+N S E SKSGI P+ L + H++ P+L GLM I P
Sbjct: 112 EQ-RPYYKAPLNVLIQINISDENSKSGITPNDMLALATHIQ-NLPHLRLRGLMAIPAPTD 169
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + + + +AL A+ LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 DLQQQEQAFNAMNSLFIALQQALPEAQIDT-LSMGMTDDMASAIKCGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
REY K
Sbjct: 229 REYHK 233
>gi|365982669|ref|XP_003668168.1| hypothetical protein NDAI_0A07710 [Naumovozyma dairenensis CBS 421]
gi|343766934|emb|CCD22925.1| hypothetical protein NDAI_0A07710 [Naumovozyma dairenensis CBS 421]
Length = 297
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVL 86
LP DIKWHF+G LQ+NK K L +PNL VE + + K L+++ P+
Sbjct: 116 LPNDIKWHFIGGLQTNKCKDL-AKIPNLYCVETIDSLKKVKKLNESRLKFSEDADPINCY 174
Query: 87 VQVNTSGEESKSGI-DPSSCLGIVEHV-----RLRCPNLEFSGLMTIG------MPDYTS 134
+Q+NTS EE KSG+ + + IVE+ + + L GLMTIG D+
Sbjct: 175 IQINTSNEEQKSGLHEENEIFEIVEYFLNKDGKEKPLMLNLVGLMTIGSWNVSHQVDHDK 234
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG---PR 191
E+F L N ++++ G +LSMGMS D++QA+ GST VRIG+ IFG P+
Sbjct: 235 DNEDFTALANWKSKIDSKFGT---DLKLSMGMSADYKQAVRQGSTEVRIGTDIFGNRPPK 291
Query: 192 EYAK 195
+ AK
Sbjct: 292 DEAK 295
>gi|315225144|ref|ZP_07866961.1| YggS family pyridoxal phosphate enzyme [Capnocytophaga ochracea
F0287]
gi|420158699|ref|ZP_14665515.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga ochracea
str. Holt 25]
gi|314944827|gb|EFS96859.1| YggS family pyridoxal phosphate enzyme [Capnocytophaga ochracea
F0287]
gi|394763515|gb|EJF45610.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga ochracea
str. Holt 25]
Length = 241
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L + + G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKDILRY--EVSCVESVDRLDLAQKLHNRLESEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
+K G DPS L +V+ V P L GLMTIG+ +++ E F+ L + + E+
Sbjct: 134 NKFGADPSEVLNLVKQVA-TLPTLHIKGLMTIGL--FSAETEKVRACFKLLKHLQQEII- 189
Query: 152 ALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 190 ALNLPNVDPRELSMGMSGDLETAIEEGATIVRVGTAIFGKRIY 232
>gi|310796209|gb|EFQ31670.1| YggS family pyridoxal phosphate enzyme [Glomerella graminicola
M1.001]
Length = 268
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 95/180 (52%), Gaps = 18/180 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR-------- 80
LP I+WHF+G LQS AK L +PNL V V K A L+ A + L
Sbjct: 80 LPRSIQWHFIGGLQSTHAKKL-AKIPNLFCVSSVDTLKKAQLLNAARAELMSSPPDDGGA 138
Query: 81 ---KPLKVLVQVNTSGEESKSGIDPS-SCLGIVEHVRLRCPNLEFSGLMTIGM----PDY 132
+PL V VQVNTSGEESKSG+ P + + V CP L GLMTIG
Sbjct: 139 APVEPLGVHVQVNTSGEESKSGVAPGPETVALCRAVETECPALRLLGLMTIGAIARSKAT 198
Query: 133 TSTPENFRTL-LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
T+ EN L L + E+ E + ELSMGMS DFE A+ +GS VR+GSTIFG R
Sbjct: 199 TAENENEDFLCLRAQRELVAGELGLERELELSMGMSEDFEGAVRLGSGEVRVGSTIFGER 258
>gi|358396923|gb|EHK46298.1| hypothetical protein TRIATDRAFT_141044 [Trichoderma atroviride IMI
206040]
Length = 252
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 96/171 (56%), Gaps = 9/171 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP-LKVLV 87
LP I WHF+G LQS K L +PNL V V + K A L+ A +++ P L + V
Sbjct: 73 LPRTIHWHFIGGLQSGHCKNL-AKIPNLFCVSSVDSLKKAQLLNSARTSIPDLPKLNIHV 131
Query: 88 QVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN----FR 140
QVNTSGEE+KSG P + + + + P L GLMTIG +T EN F
Sbjct: 132 QVNTSGEEAKSGCSPGADTVSLCREIAQNLPGLNLLGLMTIGAIARSQATTAENENEDFE 191
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L R V K LG++ + ELSMGMS DFE AI GS+ VR+GSTIFG R
Sbjct: 192 ALREQRDLVAKELGLSPESLELSMGMSEDFEGAIAQGSSEVRVGSTIFGQR 242
>gi|197334451|ref|YP_002155186.1| pyridoxal phosphate enzyme, YggS family [Vibrio fischeri MJ11]
gi|197315941|gb|ACH65388.1| pyridoxal phosphate enzyme, YggS family [Vibrio fischeri MJ11]
Length = 236
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 102/188 (54%), Gaps = 12/188 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + I+ +++ K + ++WHF+G +QSNK + + + D V V KIA L
Sbjct: 58 YVQEGIEKVQYFQKQHPTTSLEWHFIGPIQSNKTRPI---AEHFDWVHSVERLKIAQRLN 114
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GM 129
++ S LG L VL+QVNTS EESKSG + + + + PNL GLM+I +
Sbjct: 115 EQRPSELGE--LNVLIQVNTSSEESKSGTTAEEVMELAAAIN-KMPNLTLRGLMSIPANV 171
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
+Y F+ L + + ++ + LSMGMSGD + AIE GST VRIG+ IFG
Sbjct: 172 SNYAEQLAAFKQLTSIQNQLRAQYPQVDT---LSMGMSGDMDAAIEAGSTMVRIGTAIFG 228
Query: 190 PREYAKKQ 197
R+Y K+
Sbjct: 229 ARDYKNKE 236
>gi|16272064|ref|NP_438263.1| hypothetical protein HI0090 [Haemophilus influenzae Rd KW20]
gi|260580606|ref|ZP_05848433.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1723862|sp|P44506.1|Y090_HAEIN RecName: Full=UPF0001 protein HI_0090
gi|1573041|gb|AAC21768.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092668|gb|EEW76604.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 237
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + EN FR +L ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDNIAEQENAFRKMLELFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ L + LSMGM+ D AI+ GST VRIG+ IFG R Y+ Q
Sbjct: 189 KQVLPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARNYSTSQ 235
>gi|345880213|ref|ZP_08831770.1| YggS family pyridoxal phosphate enzyme [Prevotella oulorum F0390]
gi|343923790|gb|EGV34474.1| YggS family pyridoxal phosphate enzyme [Prevotella oulorum F0390]
Length = 224
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 8/170 (4%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DIKWHF+GHLQ+NK K + P + M+E V + K+ +DK + R ++VL+
Sbjct: 59 TLPKDIKWHFIGHLQTNKVKYI---APYISMIESVDSLKLLKEIDKQATKHDR-TIQVLL 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPN-LEFSGLMTIGM--PDYTSTPENFRTLLN 144
+++ + EE+KSG+ +C +++ R N ++ G+M + D + F +
Sbjct: 115 ELHVAEEETKSGLSFDACRALLDEGEWRQLNHVQICGIMMMATNTDDAVKIAQEFDAAWH 174
Query: 145 CRAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ + +D C+ S GMS D++ A++ GST VR+G+ IFGPR Y
Sbjct: 175 FFDEIKQQYFANDDAFCQRSWGMSHDYQIAVQHGSTMVRVGTNIFGPRVY 224
>gi|442805030|ref|YP_007373179.1| alanine racemase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442740880|gb|AGC68569.1| alanine racemase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 237
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 11/163 (6%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WH +G LQ+NK K ++ V ++ + ++A+ + K R + L+QVN SGE
Sbjct: 81 WHLIGRLQTNKVKYIIDKVV---LIHSLDRLELADEIQKRAQACNR-VVNTLIQVNVSGE 136
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVC 150
E+K+GI P L V+ V PN++ GLMTI YT PEN FR L + ++
Sbjct: 137 ETKAGISPDEVLNFVKKVSA-YPNIKVKGLMTIA--PYTDNPENVRWVFRRLKDIFVDIR 193
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ D LSMGMS DFE AIE G+ VRIG++IFG R+Y
Sbjct: 194 RENINNIDMQYLSMGMSHDFEVAIEEGANIVRIGTSIFGERQY 236
>gi|293602361|ref|ZP_06684807.1| YggS family pyridoxal phosphate enzyme [Achromobacter piechaudii
ATCC 43553]
gi|292819123|gb|EFF78158.1| YggS family pyridoxal phosphate enzyme [Achromobacter piechaudii
ATCC 43553]
Length = 239
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 90/171 (52%), Gaps = 14/171 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +GHLQ+NKAK + D V+ + +A L + + N GR L VLVQV TS
Sbjct: 77 LRWVLIGHLQTNKAKD---AARDADEVQSLDRVDLAEALHRRLLNEGRT-LDVLVQVKTS 132
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLL----NCR 146
E SK G+ P + + P L GLMT+ + PD + FR L + R
Sbjct: 133 TEPSKFGMAPEDVSAFLRRIAAEFPTLRVQGLMTLAVNSPDPDAVRACFRALRTLRDSLR 192
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
AE + + + LSMGMSGDFE AIE GST VRIG+ IFG R Y Q
Sbjct: 193 AENIEGVSLER----LSMGMSGDFELAIEEGSTEVRIGTAIFGARTYPDAQ 239
>gi|419801268|ref|ZP_14326505.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK262]
gi|419844413|ref|ZP_14367702.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK2019]
gi|385193999|gb|EIF41345.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK262]
gi|386417324|gb|EIJ31809.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK2019]
Length = 234
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 8/185 (4%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +++ + N+ ++WHF+G LQSNK + + + D ++ + EKIA+ L+
Sbjct: 57 YVQEGVDKIQYFETQNI--QLEWHFIGPLQSNKTRLV---AEHFDWMQTLEREKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S E SKSGI PS + + +H+ P+L GLM I P D
Sbjct: 112 EQ-RPANKAPLNVLIQINISDEASKSGIQPSEMIELAKHIE-NLPHLCLRGLMAIPAPTD 169
Query: 132 YTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ E + + E K + LSMGM+ D + AI+ GST VRIG+ IFG R
Sbjct: 170 NIAEQEAAFSQMEQLFEQLKVAFPHQQIDTLSMGMTDDMQSAIKCGSTMVRIGTAIFGAR 229
Query: 192 EYAKK 196
+Y+KK
Sbjct: 230 DYSKK 234
>gi|345429709|ref|YP_004822827.1| hypothetical protein PARA_11320 [Haemophilus parainfluenzae T3T1]
gi|301155770|emb|CBW15238.1| predicted enzyme [Haemophilus parainfluenzae T3T1]
Length = 235
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 12/187 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +++ + N+ ++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVDKIQYFEAQNI--QLEWHFIGPLQSNKTRLV---AEHFDWMQTLERAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
+ + PL VL+Q+N S E SKSGI PS + + +H+ P+L GLM I P
Sbjct: 113 EQRPT-NKAPLNVLIQINISDEASKSGIQPSEMIELAKHIE-NLPHLRLRGLMAIPAP-- 168
Query: 133 TSTPENFRTLLNCRAEVCKALGMA--EDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
T N ++ + L +A Q + LSMGM+ D + AI+ GST VRIG+ IFG
Sbjct: 169 TDNIAEQEAAFNQMEQLFEQLKIAFPHQQIDTLSMGMTDDMQSAIKCGSTMVRIGTAIFG 228
Query: 190 PREYAKK 196
R+Y+KK
Sbjct: 229 ARDYSKK 235
>gi|429751874|ref|ZP_19284767.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429178778|gb|EKY20046.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 242
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 91/162 (56%), Gaps = 10/162 (6%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + VE V +A L ++ G K L + +QVNTS EE
Sbjct: 77 HFIGHLQTNKIKEILRY--EVSCVESVDRLDLAQKLHNRLAIEG-KELDIFIQVNTSNEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK---A 152
SK G DPS L +V+ V P L GLMTIG+ +++ E R + + A
Sbjct: 134 SKFGADPSEVLDLVKQVA-ALPTLHIKGLMTIGL--FSAETEKVRVCFQLLKRIQQDIIA 190
Query: 153 LGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
L + D ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 191 LNLPNVDPQELSMGMSGDLETAIEEGATIVRVGTAIFGQRIY 232
>gi|145507578|ref|XP_001439744.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406939|emb|CAK72347.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI WHF+GHLQ+NK T++ + NL+ ++ V + K+A ++K LGR + + VQ
Sbjct: 67 LPNDISWHFIGHLQTNKVSTIMK-IQNLEFIQSVDSLKLAQKIEKHCEKLGRN-INIFVQ 124
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
+ S EESK+G + I++ + + ++ GLMTIG P E F+ L++ +
Sbjct: 125 IKLSEEESKTGAEIDEAKLIIQEIITKFKFIKLIGLMTIG-P--IGNKEIFQQLVDLAKK 181
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ LSMGMSGD+ AI+ G+ VR+GS IFG R
Sbjct: 182 FENEFNL--QPLNLSMGMSGDYLDAIKYGADYVRVGSAIFGER 222
>gi|262273740|ref|ZP_06051553.1| hypothetical protein VHA_000715 [Grimontia hollisae CIP 101886]
gi|262222155|gb|EEY73467.1| hypothetical protein VHA_000715 [Grimontia hollisae CIP 101886]
Length = 206
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 96/168 (57%), Gaps = 12/168 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
++WHF+G +QSNK + + + D V + K+A+ L ++ ++L PL+VL+QVNT
Sbjct: 48 LEWHFIGPIQSNKTRLI---AEHFDWVHSIDRSKVAHRLSEQRPADL--PPLQVLIQVNT 102
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEV 149
SGE SKSGI + E + PNL GLM I P D+ + F L + E
Sbjct: 103 SGEASKSGIGFDDVKALAEEIDA-LPNLTLRGLMCIPQPEEDHQKQLDAFAPL-SALFET 160
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
KA D LSMGMSGD + AI GST VRIG+ IFG R+Y+K+Q
Sbjct: 161 MKA--SRPDFDTLSMGMSGDMDAAIASGSTMVRIGTAIFGARDYSKRQ 206
>gi|424743018|ref|ZP_18171335.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-141]
gi|422943663|gb|EKU38676.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-141]
Length = 230
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 20/171 (11%)
Query: 32 DIKWHFVGHLQSNKAKTL------LGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
+I+WHF+GH+Q NK K L + GV L + E + N+++ + D L +
Sbjct: 73 EIEWHFIGHVQRNKTKHLAEKFDWVHGVDRLIIAERLSNQRLQDQSD----------LNI 122
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
+QVN G++SK G P +V + + PN++ GLM I PD T+ + +TL +
Sbjct: 123 CLQVNIDGQDSKDGCAPDEVAELVAQMS-QLPNIKLRGLMVIPAPDNTAAFADAKTLFDA 181
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
V + ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 182 ---VKENHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|326203530|ref|ZP_08193394.1| alanine racemase domain protein [Clostridium papyrosolvens DSM
2782]
gi|325986350|gb|EGD47182.1| alanine racemase domain protein [Clostridium papyrosolvens DSM
2782]
Length = 235
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
+LL DK++ E KWH +GHLQ+NK K ++ V M+ V + ++A +D
Sbjct: 63 ELLEKYDKFD--EATKWHLIGHLQTNKVKYIIDKVH---MIHSVDSFELAKEIDNRAGKT 117
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
G+K + +L+QVN SGEE+K GI P VE++ R NL G+MTI P +T E
Sbjct: 118 GKK-MNILLQVNVSGEETKFGIRPEEVNEYVEYIS-RLKNLLLRGMMTIA-PFADNTQEI 174
Query: 139 ---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F+ L + ++ LSMGMS DFE AIE G+ VRIG+ IFG R Y +
Sbjct: 175 RPIFKNLYDIFIDIKNKRIDNVSMDYLSMGMSNDFEVAIEEGANIVRIGTGIFGKRNYPQ 234
Query: 196 K 196
K
Sbjct: 235 K 235
>gi|346976515|gb|EGY19967.1| hypothetical protein VDAG_01983 [Verticillium dahliae VdLs.17]
Length = 260
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 101/191 (52%), Gaps = 19/191 (9%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + LI+ + LP ++WHF+G LQS AK L +PNL V V + K A L+
Sbjct: 67 YAQELIQKVDL-----LPSTLRWHFIGGLQSGHAKKL-AHIPNLFCVSSVDSLKKARLLN 120
Query: 73 KAVSNL-----GRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMT 126
A ++L G L V VQVNTSGEE+KSG P + + + CP L GLMT
Sbjct: 121 SARADLLARGQGVDKLNVHVQVNTSGEEAKSGAAPGDETVALCRAIEDECPALNLLGLMT 180
Query: 127 IGMPDYTSTP------ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTS 180
IG + E+F L R ++ + E + ELSMGMS DFE A+ MGS
Sbjct: 181 IGAIARSKATTAETENEDFLALKEQR-DLVRKELGLERELELSMGMSNDFEGAVAMGSDE 239
Query: 181 VRIGSTIFGPR 191
VRIGSTIFG R
Sbjct: 240 VRIGSTIFGER 250
>gi|343519512|ref|ZP_08756492.1| pyridoxal phosphate enzyme, YggS family [Haemophilus pittmaniae HK
85]
gi|343392582|gb|EGV05147.1| pyridoxal phosphate enzyme, YggS family [Haemophilus pittmaniae HK
85]
Length = 234
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +R+ + N+ ++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVDKIRYFEAQNI--QLEWHFIGPLQSNKTRLV---AEHFDWMQTLERAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S E SKSGI P L + EH+ + P+L GLM I P +
Sbjct: 112 EQRPQ-EKPPLNVLIQINISDEASKSGIAPPDMLPLAEHI-CQLPHLRLRGLMAIPAPTN 169
Query: 132 YTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ +N T + + KA + LSMGM+ D + AI+ GST VRIG+ IFG R
Sbjct: 170 VLTEQQNAFTQMARLFDKLKAAFPNQQIDTLSMGMTDDMQSAIQCGSTMVRIGTAIFGAR 229
Query: 192 EYAK 195
+Y K
Sbjct: 230 DYHK 233
>gi|359424728|ref|ZP_09215840.1| hypothetical protein GOAMR_34_00890 [Gordonia amarae NBRC 15530]
gi|358240025|dbj|GAB05422.1| hypothetical protein GOAMR_34_00890 [Gordonia amarae NBRC 15530]
Length = 258
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 97/173 (56%), Gaps = 19/173 (10%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +GHLQ+NKAK + + + N ++A LD+ +++LGR L+V VQVNTS
Sbjct: 88 VEWAVIGHLQTNKAKDVAAFAAEF---QALDNLRVAEALDRRLTDLGRT-LEVFVQVNTS 143
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP----ENFRTLLN---- 144
EESK G+ P G + + R L+ GLMT+ + +TS E FRTL
Sbjct: 144 AEESKFGLPPEELAGFLREL-PRFETLKVQGLMTLAL--FTSEADRVRECFRTLRTLRDR 200
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
RA+ + +G E LSMGMSGD+E AIE G+T VR+G IFG R Q
Sbjct: 201 ARADSPELIGPGE----LSMGMSGDYELAIEEGATCVRVGQAIFGARNTPDSQ 249
>gi|340360298|ref|ZP_08682768.1| alanine racemase domain protein [Actinomyces sp. oral taxon 448
str. F0400]
gi|339883499|gb|EGQ73342.1| alanine racemase domain protein [Actinomyces sp. oral taxon 448
str. F0400]
Length = 257
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 15/165 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+W +GHLQ+NKAK + V D + + + ++A LD+ + GR L V VQVN+
Sbjct: 89 DIRWSVIGHLQTNKAKDV---VAFADEFQALDSLRVAEALDRRLQPTGRG-LDVFVQVNS 144
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPN---LEFSGLMTIGM--PDYTSTPENFRTLLNCR 146
SGE SK G++P +GI+ R P+ L GLMT+ D E FR + + R
Sbjct: 145 SGEASKFGVEPDGVMGILR----RLPSYSCLRVVGLMTLAARTDDEARIRECFRIMRSLR 200
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ +++ Q LSMGMSGDFE AIE GST VR+G IFG R
Sbjct: 201 EAALQEDLLSDGQ--LSMGMSGDFELAIEGGSTCVRVGQAIFGAR 243
>gi|255715669|ref|XP_002554116.1| KLTH0E14652p [Lachancea thermotolerans]
gi|238935498|emb|CAR23679.1| KLTH0E14652p [Lachancea thermotolerans CBS 6340]
Length = 255
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 98/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVL-- 86
LP+DI+WHF+G LQ+NK K L V NL VE + + K A L++A + L + K+L
Sbjct: 81 LPKDIRWHFIGGLQTNKCKDL-AKVENLYAVETIDSLKKAKKLNEARAKLHPQANKILCN 139
Query: 87 VQVNTSGEESKSGI-DPSSCLGIVEH-VRLRCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E KSG+ D +V+ + N+E GLMTIG D ++ T EN F
Sbjct: 140 VQINTSEEAQKSGLSDEKEIFEVVQFMLSDEATNIELGGLMTIGSWDVSHSETEENHDFA 199
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L + ++ +LSMGMS DF+QAI G++ VRIG+ IFG R
Sbjct: 200 VLCQWKKKIDDKFST---DLKLSMGMSSDFKQAINQGTSQVRIGTDIFGTR 247
>gi|113461358|ref|YP_719427.1| hypothetical protein HS_1215 [Haemophilus somnus 129PT]
gi|112823401|gb|ABI25490.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 231
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 13/176 (7%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ FI+++ ++WHF+G LQSNK K + N D ++ + EKIA L++ +
Sbjct: 65 KIQYFIEQHI---QLEWHFIGPLQSNKTKLV---AENFDWMQTLDREKIATRLNEQRPHY 118
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTP 136
++PL VL+Q+N S E SKSGI P L + +H++ P+L GLM I P + T+
Sbjct: 119 -KQPLNVLIQINISAENSKSGIQPQEMLSLAKHIQ-NLPHLRLRGLMAIPEPTDNITAQE 176
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ F + ++ L +++ + LSMGMS D AI+ GST VRIG+ IFG R
Sbjct: 177 QAFNQMKYLFTQL--QLAFPDEKIDTLSMGMSDDMASAIKCGSTMVRIGTAIFGKR 230
>gi|319896535|ref|YP_004134728.1| hypothetical protein HIBPF01320 [Haemophilus influenzae F3031]
gi|317432037|emb|CBY80385.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 233
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVEKIQYFESQNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
+ + PL VL+Q+N S EESKSGI P L + +H+ P+L GLM I P
Sbjct: 112 EQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPT- 168
Query: 133 TSTPEN---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
PE FR + + ++ +AL + LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 169 DKIPEQEAVFRKMSDLFEQLKQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFG 227
Query: 190 PREYAK 195
R+Y+K
Sbjct: 228 ARDYSK 233
>gi|312129821|ref|YP_003997161.1| alanine racemase [Leadbetterella byssophila DSM 17132]
gi|311906367|gb|ADQ16808.1| alanine racemase domain protein [Leadbetterella byssophila DSM
17132]
Length = 244
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 16/165 (9%)
Query: 36 HFVGHLQSNKAKTLL----GGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
HF+GHLQ+NK K +L + +LD ++ EK+ L+ K + VLVQVNT
Sbjct: 78 HFIGHLQTNKIKEVLKYDVSCIQSLDRIDLA--EKLQQRLE-----YEDKTIDVLVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEV 149
S EESK G+ P + + +V+ + R L+ GLMTIG+ + + F+ L N + E+
Sbjct: 131 SNEESKFGVHPDNAIALVQQI-ARLDRLKIKGLMTIGLFSAETEKVRQCFKLLKNIQQEI 189
Query: 150 CKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL + + Q ELSMGMSGD E AIE G+T +R+G+ IFG R Y
Sbjct: 190 I-ALNIPDIQMKELSMGMSGDLETAIEEGATIIRVGTAIFGQRIY 233
>gi|336434969|ref|ZP_08614687.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001862|gb|EGN31989.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
1_4_56FAA]
Length = 240
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +KY LP+DI WH +GHLQ+NK K + V +++ V + K+A ++K +
Sbjct: 66 KVQELTEKYEVLPKDIHWHMIGHLQTNKVKYI---VDKAELIHSVDSLKLAETIEKEAAK 122
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+ +L++VN + EESK G+ L ++E + R P++ GLMTI P ++ E
Sbjct: 123 -KNCIVSILIEVNVAQEESKFGVHTDEVLPLIEKIS-RFPHVRIQGLMTIA-PFVQNSEE 179
Query: 138 N---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
N FRTL ++ + + LSMGM+ D+E AIE G+T VR+G+ IFG R+Y+
Sbjct: 180 NRTIFRTLQKLSVDIMQKNIDNVNVSILSMGMTNDYEVAIEEGATMVRVGTGIFGARDYS 239
>gi|229847062|ref|ZP_04467168.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
7P49H1]
gi|229810146|gb|EEP45866.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
7P49H1]
Length = 233
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+ +++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVEKIQYFESQNI--NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S EESKSGI P L + +H+ P+L GLM I P D
Sbjct: 112 EQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLILAKHIE-NLPHLCLRGLMAIPAPTD 169
Query: 132 YTSTPEN-FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ E FR + + ++ +AL + LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 KIAEQEAVFRKMSDLFEQLKQALPNQQIDT-LSMGMTDDMPSAIKYGSTMVRIGTAIFGA 228
Query: 191 REYAK 195
R Y+K
Sbjct: 229 RNYSK 233
>gi|421788451|ref|ZP_16224751.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-82]
gi|410403063|gb|EKP55165.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-82]
Length = 230
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTAAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|423302464|ref|ZP_17280487.1| YggS family pyridoxal phosphate enzyme [Bacteroides finegoldii
CL09T03C10]
gi|408471555|gb|EKJ90087.1| YggS family pyridoxal phosphate enzyme [Bacteroides finegoldii
CL09T03C10]
Length = 224
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 15/183 (8%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQSNK K + +P + M+ G+ K+ ++K
Sbjct: 47 KVQEMTAKYESLPKDIEWHFIGHLQSNKIKYM---IPYVAMIHGIDTYKLLAEVNKQAGK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EE+K G P C +++ + ++ GLM GM T
Sbjct: 104 AGR-TVNCLLQIHVAQEETKFGFSPEECREMLDAREWKALAHVRICGLM--GMASNTDNI 160
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
E FR LLN + KA + ELSMGMS D+ +AI GST VR+GS IFG
Sbjct: 161 EQINGEFR-LLNSLFKEIKANWFTDSDAFRELSMGMSHDYHEAIASGSTLVRVGSKIFGE 219
Query: 191 REY 193
REY
Sbjct: 220 REY 222
>gi|254363058|ref|ZP_04979117.1| hypothetical protein MHA_2645 [Mannheimia haemolytica PHL213]
gi|452746043|ref|ZP_21945875.1| hypothetical protein F388_13452 [Mannheimia haemolytica serotype 6
str. H23]
gi|153094723|gb|EDN75513.1| hypothetical protein MHA_2645 [Mannheimia haemolytica PHL213]
gi|452086182|gb|EME02573.1| hypothetical protein F388_13452 [Mannheimia haemolytica serotype 6
str. H23]
Length = 225
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ + F N PE ++WHF+G LQSNK K + D ++ V KIA L+
Sbjct: 55 YVQEAVEKIEFF--ANRPE-LEWHFIGPLQSNKTKLVAA---YFDWIQTVDRLKIAERLN 108
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
+ + PL VL+Q+N S E SKSGI+P L + + + + PNL+ GLM I P+
Sbjct: 109 EQ-RPADKAPLNVLIQINISDEASKSGIEPDEMLPLAQAIS-QLPNLKLRGLMAIPKPE- 165
Query: 133 TSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
S PE + + L D + LSMGMS D + AIE GST VRIG+ IFG R
Sbjct: 166 -SEPEQQKVAFRKMQLLFNRLQTEFDDIDTLSMGMSDDMQAAIECGSTMVRIGTAIFGAR 224
>gi|91776460|ref|YP_546216.1| hypothetical protein Mfla_2108 [Methylobacillus flagellatus KT]
gi|91710447|gb|ABE50375.1| Protein of unknown function UPF0001 [Methylobacillus flagellatus
KT]
Length = 241
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+WHF+G +QSNK + + + V V KIA+ L+ A G+ L+V +QVN S
Sbjct: 80 IEWHFIGPIQSNKTQPI---AQHFHWVHSVDRAKIADRLN-AAREPGQTALQVCIQVNVS 135
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKA 152
GE SKSG + + + +H+R + P L GLM I P T P+ R+ +
Sbjct: 136 GESSKSGTSAADAIALADHIR-QLPKLRLRGLMAIPAP--TDDPQEQRSQFRAVRNIYDR 192
Query: 153 LGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L A D LSMGMS DF AI+ G+T VR+GS IFG R
Sbjct: 193 LQSAGHDLDTLSMGMSEDFPAAIQEGATIVRVGSAIFGAR 232
>gi|417846114|ref|ZP_12492127.1| UPF0001 protein [Haemophilus haemolyticus M21639]
gi|341953365|gb|EGT79873.1| UPF0001 protein [Haemophilus haemolyticus M21639]
Length = 233
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + E FR + + ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDKIAEQETVFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D AI+ GST VRIG+ IFG R+Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARDYSK 233
>gi|358012302|ref|ZP_09144112.1| hypothetical protein AP8-3_12380 [Acinetobacter sp. P8-3-8]
Length = 228
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L V GV IA L + + PL + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFAWVHGVDRFIIAERLSNQRA-ITSNPLNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL-NCRAEVC 150
+ESK G P +V+ + + PNL+ GLM I PD++ + + L N +A+
Sbjct: 129 DAQESKDGCQPEEVAELVQQIS-QLPNLKLRGLMVIPAPDHSQAFVDAKNLFENVKAQHA 187
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
ED LSMGMSGD AI GST VR+G+ +FG R+Y
Sbjct: 188 HP----EDWDTLSMGMSGDMASAIAAGSTMVRVGTALFGARDY 226
>gi|262373214|ref|ZP_06066493.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262313239|gb|EEY94324.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 233
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L +K L + +QVN
Sbjct: 78 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSSQRLE-TQKLLNICLQVNI 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G +P+ +VE + R PNL GLM I P+ + + + L + +V
Sbjct: 134 DGQDSKDGCEPNEVAELVEQIS-RLPNLRLRGLMVIPAPNNVAAFADAKNLFD---QVKS 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+D LSMGMS D + AI GST VR+G+ +FG R+Y+
Sbjct: 190 LHAQPQDWDTLSMGMSADLDAAIAAGSTMVRVGTALFGARDYS 232
>gi|357058629|ref|ZP_09119477.1| YggS family pyridoxal phosphate enzyme [Selenomonas infelix ATCC
43532]
gi|355373585|gb|EHG20901.1| YggS family pyridoxal phosphate enzyme [Selenomonas infelix ATCC
43532]
Length = 239
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+L ++KWH +GHLQ+NK K V D++ V + +A +DKA + G K +LV
Sbjct: 73 SLEREVKWHLIGHLQTNKVKH---AVRQFDLIHSVDSLYLAREIDKAAAKFG-KVQNILV 128
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVR-LRCPNLEFSGLMTIGMPDYTSTPEN---FRTLL 143
Q+N + EESKSGID + I+ + LR L+ G M I P+Y E FRT+
Sbjct: 129 QINLAREESKSGIDRAELDDILAGIDDLRAIRLQ--GFMCIA-PNYEDVEECRPLFRTMY 185
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ +V D LSMGM+ D+E A+E G+ VRIG+ IFG R+YA
Sbjct: 186 DIFQQVKADEPRTADIRYLSMGMTHDYEIAVEEGANLVRIGTAIFGARQYA 236
>gi|158320440|ref|YP_001512947.1| alanine racemase domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158140639|gb|ABW18951.1| alanine racemase domain protein [Alkaliphilus oremlandii OhILAs]
Length = 234
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 95/169 (56%), Gaps = 13/169 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+KWH +GHLQ NK K ++ V D++ + + ++A +D +GR ++ L+QVN S
Sbjct: 74 VKWHLIGHLQRNKVKYIIDKV---DLIHSLDSYRLAEEIDSRAKEIGR-TIECLLQVNVS 129
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAE 148
GEE+K G+D ++ V N++ GLMT M Y E F+ L + E
Sbjct: 130 GEETKYGVDKEGAKSLIREVAA-LGNIKVLGLMT--MAPYVENQEEARQYFKALKDLSIE 186
Query: 149 VCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ A+ + + LSMGMS DFE AIE G+ VR+GS IFG R+Y+KK
Sbjct: 187 IS-AMDLENVHMKYLSMGMSNDFEIAIEEGANLVRVGSLIFGERDYSKK 234
>gi|336314734|ref|ZP_08569650.1| pyridoxal phosphate enzyme, YggS family [Rheinheimera sp. A13L]
gi|335881033|gb|EGM78916.1| pyridoxal phosphate enzyme, YggS family [Rheinheimera sp. A13L]
Length = 230
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 91/162 (56%), Gaps = 10/162 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E I+WHF+G +QSNK K + D V + KIA L A L + PL+VL+QVN
Sbjct: 73 EGIEWHFIGPIQSNKTKDI---ALYADWVHSIDRLKIAERL-SAQRPLDKTPLQVLLQVN 128
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
SGEESKSGI+P+ + + V + P L GLM I P+ E F + ++
Sbjct: 129 ISGEESKSGIEPADLMNLAAQV-AKLPQLTLKGLMAI--PEPGKGAEAFAQMQQLSLQLQ 185
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ D ELSMGMS D+++A+ GST +R+G+ IFG RE
Sbjct: 186 Q---QHPDAKELSMGMSDDWQEALRFGSTMIRLGTAIFGARE 224
>gi|145219349|ref|YP_001130058.1| alanine racemase domain-containing protein [Chlorobium
phaeovibrioides DSM 265]
gi|145205513|gb|ABP36556.1| alanine racemase domain protein [Chlorobium phaeovibrioides DSM
265]
Length = 232
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV--LVQVN 90
I+WHF+GHLQSNK ++++G V ++ G+ A L + R+ L L++VN
Sbjct: 76 IEWHFIGHLQSNKVRSVIGKV---SLIHGIDKISTARELSRQAL---RQNLHADYLLEVN 129
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
TSGE +K G+ L E + P++ GLM I PD S FR L ++
Sbjct: 130 TSGESTKYGMAEDEVLSAAETL-FTLPSITLRGLMNIASPDEASARNEFRRLRQLLKQLR 188
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ E+ ELSMGMSGDFE A+ G+T +R+G+ IFG R
Sbjct: 189 EVAPNPEELSELSMGMSGDFESAVMEGATMIRVGTAIFGAR 229
>gi|320354290|ref|YP_004195629.1| alanine racemase domain-containing protein [Desulfobulbus
propionicus DSM 2032]
gi|320122792|gb|ADW18338.1| alanine racemase domain protein [Desulfobulbus propionicus DSM
2032]
Length = 235
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP ++WHF+GHLQSNKA + MVE V K+A LD L K L +L+
Sbjct: 66 QLPPTVQWHFIGHLQSNKAAQV---AELFTMVETVDRFKVAKALDLHAKRLD-KHLSILI 121
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVN E+ KSG+ P ++ + NL GLM +P + S PE R
Sbjct: 122 QVNIGREKQKSGVMPEETTELLHAISAET-NLRVRGLM--ALPPFFSDPEKSRPYFRALR 178
Query: 148 EVCKALGMAE-----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ + L + + D ELSMGMS D+ AIE G+T VR+G+ +FG R
Sbjct: 179 ELAQQLAVKKLFHDNDAIELSMGMSNDYPVAIEEGATIVRVGTALFGSR 227
>gi|303250530|ref|ZP_07336727.1| hypothetical protein APP6_0100 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251874|ref|ZP_07338045.1| hypothetical protein APP2_0195 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247027|ref|ZP_07529081.1| hypothetical protein appser2_260 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251572|ref|ZP_07533479.1| hypothetical protein appser6_960 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649304|gb|EFL79489.1| hypothetical protein APP2_0195 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650518|gb|EFL80677.1| hypothetical protein APP6_0100 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306856479|gb|EFM88628.1| hypothetical protein appser2_260 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306861036|gb|EFM93042.1| hypothetical protein appser6_960 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 227
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 96/180 (53%), Gaps = 18/180 (10%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L A +
Sbjct: 62 KIAYFAQQPNL----EWHFIGALQSNKTRLV---AENFDWIQTVDRLKIAERL-SAQRSA 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E SKSGI P + + + + PNL GLM I P+ S PE
Sbjct: 114 NKAPLNVLIQINISDEASKSGIQPEELDELAKAIS-QLPNLRLRGLMAIPKPE--SEPEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ L ++ L +D+ E LSMGMS D AIE GST VRIG+ IFG R Y+
Sbjct: 171 QKIALRKMRQLFDRL---QDEFEGIDTLSMGMSDDMAAAIECGSTMVRIGTAIFGTRYYS 227
>gi|451948174|ref|YP_007468769.1| pyridoxal phosphate enzyme, YggS family [Desulfocapsa sulfexigens
DSM 10523]
gi|451907522|gb|AGF79116.1| pyridoxal phosphate enzyme, YggS family [Desulfocapsa sulfexigens
DSM 10523]
Length = 232
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 12/171 (7%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
++++ + K+HF+GH+QSNKAK MVE V K+A L+K + L RK L +
Sbjct: 65 RHSIDDAAKFHFIGHVQSNKAKL---AAELFSMVETVDRLKLAKALNKHLLTLDRK-LDI 120
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRT 141
L+QVN + KSG+ P + +++H+R + GLMTI P ++S E FR
Sbjct: 121 LIQVNIGEDPKKSGVPPENAGALLKHIRT-LSQIRPMGLMTI--PPFSSDTEKTRIYFRD 177
Query: 142 LLNCRAEVCKALGMAED-QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L N E+ K +++ + ELSMGMS DF+ AIE G+T +RIG+ IFG R
Sbjct: 178 LSNLGKELAKQELFSDNSRFELSMGMSQDFKTAIEEGATIIRIGTAIFGDR 228
>gi|145633703|ref|ZP_01789429.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
3655]
gi|145635487|ref|ZP_01791187.1| hypothetical protein CGSHiAA_03736 [Haemophilus influenzae PittAA]
gi|144985463|gb|EDJ92284.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
3655]
gi|145267252|gb|EDK07256.1| hypothetical protein CGSHiAA_03736 [Haemophilus influenzae PittAA]
Length = 237
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+ +++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVEKIQYFESQNI--NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S EESKSGI P L + +H+ P+L GLM I P D
Sbjct: 112 EQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTD 169
Query: 132 YTSTPEN-FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ E FR + + ++ +AL + LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 KIAEQEAVFRKMSDLFEQLKQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGA 228
Query: 191 REYAKKQ 197
R Y+ Q
Sbjct: 229 RNYSTSQ 235
>gi|429327759|gb|AFZ79519.1| hypothetical protein BEWA_023680 [Babesia equi]
Length = 231
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 16/164 (9%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
NLP IKWHF+GHLQSNK K +L V L MVE + + K A LDK + + K +KVLV
Sbjct: 79 NLP--IKWHFIGHLQSNKCK-MLASVKGLYMVESIDSVKTAMELDKCLERVS-KTVKVLV 134
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVR--LRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
QVNT+ E + GI + + E V L +LEFSGLMTIG T E + L++
Sbjct: 135 QVNTTLRE-QFGILYNQMEKVREVVSAVLASQHLEFSGLMTIG----DGTSECYARLISV 189
Query: 146 RAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIF 188
R+E+ +++G C+ +SMGMS D++ AIE GST VR+G +F
Sbjct: 190 RSELERSVG----PCKVMSMGMSHDWKDAIEGGSTQVRVGRCLF 229
>gi|78044191|ref|YP_360862.1| hypothetical protein CHY_2043 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996306|gb|ABB15205.1| conserved hypothetical protein TIGR00044 [Carboxydothermus
hydrogenoformans Z-2901]
Length = 224
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F++KY +++WHF+GHLQ+NK +LG V ++ + +A ++K L
Sbjct: 52 KVQEFLEKYEKLPNLEWHFIGHLQTNKINKILGKVV---LIHSLDRYNLAEEINKRAYRL 108
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
G + VL++VN + EE+K G+ P VR NLE SGLMT+ Y PE
Sbjct: 109 GIN-VPVLLEVNMAKEETKFGLMPEEVEDFYFEVRENFKNLEVSGLMTVA--PYVENPEE 165
Query: 139 FRTLLNCRAEV---CKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R + E+ KA D+ + LSMGMS D++ A+E G+ +R+G+ +FG R+Y
Sbjct: 166 VRPVFRAMRELFLKLKAKDPENDKFQYLSMGMSNDYKVAVEEGANIIRLGTLLFGERKY 224
>gi|170718483|ref|YP_001783697.1| alanine racemase [Haemophilus somnus 2336]
gi|168826612|gb|ACA31983.1| alanine racemase domain protein [Haemophilus somnus 2336]
Length = 244
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 13/176 (7%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ FI+++ ++WHF+G LQSNK K + N D ++ + EKIA L++ +
Sbjct: 78 KIQYFIEQHI---QLEWHFIGPLQSNKTKLV---AENFDWMQTLDREKIATRLNEQRPHY 131
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTP 136
++PL VL+Q+N S E SKSGI P L + +H++ P+L GLM I P + T+
Sbjct: 132 -KQPLNVLIQINISAENSKSGIQPQEMLILAKHIQ-NLPHLRLRGLMAIPEPTDNITAQE 189
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ F + ++ L +++ + LSMGMS D AI+ GST VRIG+ IFG R
Sbjct: 190 QAFNQMKYLFTQL--QLAFPDEKIDTLSMGMSDDMASAIKCGSTMVRIGTAIFGKR 243
>gi|193076643|gb|ABO11330.2| hypothetical protein A1S_0898 [Acinetobacter baumannii ATCC 17978]
Length = 230
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQCGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTAAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|374339925|ref|YP_005096661.1| pyridoxal phosphate protein [Marinitoga piezophila KA3]
gi|372101459|gb|AEX85363.1| pyridoxal phosphate enzyme, YggS family [Marinitoga piezophila KA3]
Length = 232
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G +Q+NK K + VP + + V EK +DK ++ K K+L++VN
Sbjct: 73 DITWHFIGRIQTNKVKYI---VPIAEYIHSVYREKELKEIDK-IAKKHNKIQKILIEVNV 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEE+K GI P ++ + + NLE GLMT M YT + + + E+
Sbjct: 129 SGEETKGGIVPEEVEEFIK-MAMHYENLEVVGLMT--MAPYTDDKGLIKNIFDKLRELRD 185
Query: 152 ALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L + + ELSMGMS D+E A+E G+T VRIGS IFG R Y
Sbjct: 186 KLNVKYKKITELSMGMSNDYEIAVESGTTMVRIGSLIFGKRNYT 229
>gi|148827239|ref|YP_001291992.1| hypothetical protein CGSHiGG_03010 [Haemophilus influenzae PittGG]
gi|148718481|gb|ABQ99608.1| hypothetical protein CGSHiGG_03010 [Haemophilus influenzae PittGG]
Length = 233
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 105/186 (56%), Gaps = 12/186 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+ +++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVEKIQYFESQNI--NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
+ + PL VL+Q+N S EESKSGI P L + +H+ P+L GLM I P
Sbjct: 112 EQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPT- 168
Query: 133 TSTPEN---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
PE FR + + ++ + L + LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 169 DKIPEQEAVFRKMSDLFEQLKQVLPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFG 227
Query: 190 PREYAK 195
R+Y+K
Sbjct: 228 TRDYSK 233
>gi|262280014|ref|ZP_06057799.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260365|gb|EEY79098.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 235
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 20/171 (11%)
Query: 32 DIKWHFVGHLQSNKAKTL------LGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
+I+WHF+GH+Q NK K L + GV L + E + N+++ + D L +
Sbjct: 78 EIEWHFIGHVQRNKTKNLAEKFDWVHGVDRLIIAERLSNQRLQDQSD----------LNI 127
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
+QVN G++SK G P +V + + P + GLM I PD T+ + + L +
Sbjct: 128 CLQVNIDGQDSKDGCAPDEVAALVAQIS-QLPKIRLRGLMVIPAPDNTAAFADAKRLFD- 185
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
EV + +D LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 186 --EVKEKHAHPQDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 234
>gi|417838778|ref|ZP_12485011.1| UPF0001 protein [Haemophilus haemolyticus M19107]
gi|341956451|gb|EGT82874.1| UPF0001 protein [Haemophilus haemolyticus M19107]
Length = 233
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKTPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI L + +H+ P+L GLM I P D + EN F+ +L+ ++
Sbjct: 130 SDEESKSGIQSEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDNIAEQENAFKKMLSLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D AI+ GST VRIG+ IFG R+Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARDYSK 233
>gi|441504385|ref|ZP_20986379.1| Putative protein YggS [Photobacterium sp. AK15]
gi|441427852|gb|ELR65320.1| Putative protein YggS [Photobacterium sp. AK15]
Length = 208
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 98/188 (52%), Gaps = 12/188 (6%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++ + + + WHF+G +QSNK + + + D V + KIA L
Sbjct: 30 YVQEGVEKVQHFSSHQQADSLSWHFIGPIQSNKTRLI---AEHFDWVHSIDRAKIARRLS 86
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MP 130
+ PL VL+Q+NTS E SKSGI + + + PNL GLM+I
Sbjct: 87 EQ-RPADMPPLNVLLQINTSSEASKSGIAFEDLEALADEIAA-MPNLVLRGLMSIPERAD 144
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
DY S F++L + + + L Q + LSMGMSGD E AI GST VRIG+ IFG
Sbjct: 145 DYDSQYAAFKSLADAK----EKLQAKHPQLDTLSMGMSGDMEAAIAAGSTIVRIGTAIFG 200
Query: 190 PREYAKKQ 197
R+Y+ KQ
Sbjct: 201 ARDYSNKQ 208
>gi|239503167|ref|ZP_04662477.1| TIM-barrel fold family protein [Acinetobacter baumannii AB900]
gi|421679790|ref|ZP_16119658.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC111]
gi|410390609|gb|EKP42992.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC111]
Length = 230
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P ++ GLM I PD T + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTGAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|416893146|ref|ZP_11924432.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter aphrophilus
ATCC 33389]
gi|347814174|gb|EGY30824.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter aphrophilus
ATCC 33389]
Length = 234
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 18/189 (9%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ +Y++ ++WHF+G LQSNK + + D ++ + KIA+ L
Sbjct: 58 YVQEGVEKIQYCQQYDI--SLEWHFIGPLQSNKTRLV---AEYFDWMQTLERAKIADRL- 111
Query: 73 KAVSNLGRKPLK----VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG 128
N R P K VL+Q+N S E +KSGI PS L + +H+ P+L GLM I
Sbjct: 112 ----NEQRPPYKALLNVLIQINISQEATKSGIQPSDMLTLAKHIE-NLPHLRLRGLMAIP 166
Query: 129 MP--DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGST 186
P D + F + ++ +AL A+ LSMGM+ D + AI+ GST VRIG+
Sbjct: 167 EPTDDVAQQEQTFCQMKTLFEQLQQALPNAQIDT-LSMGMTDDMQSAIKCGSTMVRIGTA 225
Query: 187 IFGPREYAK 195
IFG R+YAK
Sbjct: 226 IFGKRDYAK 234
>gi|78186366|ref|YP_374409.1| hypothetical protein Plut_0478 [Chlorobium luteolum DSM 273]
gi|78166268|gb|ABB23366.1| Protein of unknown function UPF0001 [Chlorobium luteolum DSM 273]
Length = 229
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+GHLQSNK ++++G V ++ G+ A L K G L+++NTS
Sbjct: 76 LEWHFIGHLQSNKVRSVIGRV---SLIHGIDKVSTAEELSKQAVKRGINA-DYLLEINTS 131
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKA 152
GE +K G+ P E + P + GLMTI PD + FR L +
Sbjct: 132 GEATKYGMQPLEAKAAAETL-FGLPGITLRGLMTIASPDPSQAETEFRDLRLLLDAIKTQ 190
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ ELSMGMSGDFE AI G+T VR+G+ IFG R
Sbjct: 191 APHPEELTELSMGMSGDFEAAIRQGATLVRVGTAIFGWR 229
>gi|398835476|ref|ZP_10592838.1| pyridoxal phosphate enzyme, YggS family [Herbaspirillum sp. YR522]
gi|398216262|gb|EJN02815.1| pyridoxal phosphate enzyme, YggS family [Herbaspirillum sp. YR522]
Length = 265
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 8/166 (4%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP D++W +GHLQ+NKA + ++ + ++A L++ + LGR L V V
Sbjct: 91 DLP-DLRWSVIGHLQTNKAHLVARLAHEFQALDSL---RLAEVLERRLQLLGRG-LDVFV 145
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNC 145
QVNTSGE SK G+ P+ + V + + P L GLMT+ + PD + F L
Sbjct: 146 QVNTSGEASKYGLPPAEVIRFVRELAVY-PALRVRGLMTLAVFSPDRARVRQCFVLLRQL 204
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++C+ L +LSMGMSGD E AIE G+T VR+G I+G R
Sbjct: 205 REQLCQELAGGAQMTQLSMGMSGDMELAIEEGATVVRVGQAIYGAR 250
>gi|297626139|ref|YP_003687902.1| alanine racemase [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921904|emb|CBL56464.1| alanine racemase [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 250
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 15/175 (8%)
Query: 25 DKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLK 84
D+ +D + +GHLQSNK + G + D + + + K+A LD+ ++ LGR L+
Sbjct: 81 DELRPDDDFGFALIGHLQSNKVNAVAGLI---DEFQALDSLKLAGRLDRRLNTLGRG-LR 136
Query: 85 VLVQVNTSGEESKSGIDPSS----CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPEN 138
VLV+VNTSGE +K GID C + + L +GLMT+ + PD
Sbjct: 137 VLVEVNTSGEAAKHGIDVDDAQDFCRALADF-----DALTVAGLMTVAVNSPDRERVAAC 191
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F L+ ++ + + D ELSMGMSGD+ AIE G+T+VR+G+ +FGPR+Y
Sbjct: 192 FDRLVALQSRLRDDGVLGSDWAELSMGMSGDYPLAIEHGATTVRVGTALFGPRDY 246
>gi|445494934|ref|ZP_21461978.1| pyridoxal phosphate enzyme YggS family [Janthinobacterium sp. HH01]
gi|444791095|gb|ELX12642.1| pyridoxal phosphate enzyme YggS family [Janthinobacterium sp. HH01]
Length = 234
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+G +QSNK + + + D V V EKIA L + G PL++ +QVN S
Sbjct: 77 LEWHFIGPIQSNKTRPI---AEHFDWVHTVEREKIAQRLSEQRPQ-GMAPLQICLQVNIS 132
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVC 150
GE SKSG+ P L + H PNL GLM I P D+ F L E
Sbjct: 133 GEASKSGVAPQE-LAALAHKVAALPNLTLRGLMAIPEPAEDFAQQRAAF-AQLRVLYEQL 190
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+A G+A D LSMGMS D AI G+T VR+GS IFG R Y K
Sbjct: 191 RADGLALD--TLSMGMSADMRAAIVEGATIVRVGSAIFGSRNYNK 233
>gi|357029889|ref|ZP_09091865.1| alanine racemase domain-containing protein [Mesorhizobium amorphae
CCNWGS0123]
gi|355533778|gb|EHH03097.1| alanine racemase domain-containing protein [Mesorhizobium amorphae
CCNWGS0123]
Length = 220
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKAK V D++E + EKIA L K ++ GR P K+ VQVNT
Sbjct: 75 DIELHLIGPLQSNKAKE---AVALFDVIETIDREKIAAELAKEIARQGRSP-KLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
E K+GI+P + V VR R L GLM I P P LL ++
Sbjct: 131 GSEPQKAGIEPREAVAFV--VRCREVHGLAIEGLMCI--PPADENPGPHFALLE---KLS 183
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
K G+A+ LSMGMSGD+E AI G+TSVR+GS IFG R
Sbjct: 184 KEAGVAK----LSMGMSGDYETAIAFGATSVRVGSAIFGSR 220
>gi|153004231|ref|YP_001378556.1| alanine racemase domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027804|gb|ABS25572.1| alanine racemase domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 213
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LPE ++WHF+G LQ+NK K L G V + V+ E++A L + + G +V V
Sbjct: 60 DLPE-LRWHFIGALQTNKVKYLAGRVAYVHTVD---REELARELSRRFAQKG-AVARVFV 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
+VNT GE SK+G P + +R P+LE G+M I P+ P +FR L R
Sbjct: 115 EVNTGGEASKAGCAPGEVPALAAAIR-DLPSLELVGVMGIPPPEDDPRP-HFRALRALR- 171
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
ALG+ ELSMGMSGD+ A+E G+T VRIGS IFG R
Sbjct: 172 ---DALGV----RELSMGMSGDWRVAVEEGATFVRIGSAIFGAR 208
>gi|145637682|ref|ZP_01793336.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
PittHH]
gi|145269142|gb|EDK09091.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
PittHH]
Length = 237
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVEKIQYFESQNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S EESKSGI P L + +H+ P+L GLM I P D
Sbjct: 112 EQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTD 169
Query: 132 YTSTPEN-FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ E FR + + ++ +AL + LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 KIAEQETVFRKMSDLFEQLKQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGA 228
Query: 191 REYAKKQ 197
R Y+ Q
Sbjct: 229 RNYSTSQ 235
>gi|126640948|ref|YP_001083932.1| hypothetical protein A1S_0898 [Acinetobacter baumannii ATCC 17978]
Length = 185
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 28 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQCGD-DQAALNICLQVNI 83
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 84 DGQESKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTAAFADAKKLFDA---VKV 139
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 140 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 184
>gi|113869059|ref|YP_727548.1| hypothetical protein H16_A3105 [Ralstonia eutropha H16]
gi|113527835|emb|CAJ94180.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 231
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+L ++WHF+G LQSNK + + + D V V +IA L A G L+V +
Sbjct: 71 DLRHRLQWHFIGPLQSNKTRLV---AEHFDWVHAVDRLRIAERL-SAQRPAGMAALQVCI 126
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVN SGE SKSG+ P+ G+ H P L GLM I P++ + R RA
Sbjct: 127 QVNISGEASKSGVAPAEVPGLA-HAVAALPGLRLRGLMAIPEPEHDPAAQR-RPFAAMRA 184
Query: 148 --EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + G+ D LSMGMSGD E AI G+T VRIG+ IFG R+Y
Sbjct: 185 MLQALRTDGL--DLDTLSMGMSGDMEAAIAEGATLVRIGTAIFGARQY 230
>gi|392406756|ref|YP_006443364.1| pyridoxal phosphate enzyme, YggS family [Anaerobaculum mobile DSM
13181]
gi|390619892|gb|AFM21039.1| pyridoxal phosphate enzyme, YggS family [Anaerobaculum mobile DSM
13181]
Length = 234
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I WH +GHLQ NKAK + D+++ V N ++A L++ ++ + VL++VN
Sbjct: 77 NIPWHMIGHLQRNKAKQ---AIQIFDVIQSVDNLELATVLEERLTVFD-DIMPVLIEVNI 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAEV 149
SGE SK GI P + EH+ CP+L+ GLM IG + +F L + +
Sbjct: 133 SGEASKYGIPPDRVHSLTEHILNLCPHLKLLGLMGIGPLTDEEERIGSSFAMLRRIKETL 192
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + D ELSMGMS DFE AI+ GST VRIG IFGPR
Sbjct: 193 ERDFEI--DIPELSMGMSDDFEIAIKEGSTMVRIGRAIFGPR 232
>gi|319780906|ref|YP_004140382.1| alanine racemase domain-containing protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317166794|gb|ADV10332.1| alanine racemase domain protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 220
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 87/162 (53%), Gaps = 18/162 (11%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKA+ V D++E V EKIA L K ++ GR P K+ VQVNT
Sbjct: 75 DIELHLIGPLQSNKARE---AVALFDVIETVDREKIAAELAKEIAKQGRAP-KLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTL--LNCRAEV 149
E K+GI+P + V R L GLM I D P +F L L+ A V
Sbjct: 131 GSEPQKAGIEPRDAVAFVARCR-EVHGLAIEGLMCIPPADENPGP-HFALLEKLSKEANV 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
K LSMGMSGD+E AI G+TSVR+GS IFG R
Sbjct: 189 AK----------LSMGMSGDYETAIAFGATSVRVGSAIFGTR 220
>gi|325579003|ref|ZP_08148959.1| YggS family pyridoxal phosphate enzyme [Haemophilus parainfluenzae
ATCC 33392]
gi|325159238|gb|EGC71372.1| YggS family pyridoxal phosphate enzyme [Haemophilus parainfluenzae
ATCC 33392]
Length = 234
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 8/185 (4%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + + +++ + N+ ++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVDKIQYFEAQNI--QLEWHFIGPLQSNKTRLV---AEHFDWMQTLERAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S E SKSGI P+ + + +H+ P+L GLM I P D
Sbjct: 112 EQ-RPANKAPLNVLIQINISDEASKSGIQPNEMIELAKHIE-NLPHLRLRGLMAIPAPTD 169
Query: 132 YTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ E + + E K + LSMGM+ D + AI+ GST VRIG+ IFG R
Sbjct: 170 NIAEQEAAFSQMEQLFEQLKVAFPHQQIDTLSMGMTDDMQTAIKCGSTMVRIGTAIFGAR 229
Query: 192 EYAKK 196
+Y+KK
Sbjct: 230 DYSKK 234
>gi|281420372|ref|ZP_06251371.1| pyridoxal phosphate enzyme, YggS family [Prevotella copri DSM
18205]
gi|281405517|gb|EFB36197.1| pyridoxal phosphate enzyme, YggS family [Prevotella copri DSM
18205]
Length = 224
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LPEDI+WHF+GHLQ+NK K + P + M+E V + K+ ++K + R +KVL+
Sbjct: 59 SLPEDIEWHFIGHLQTNKVKYI---APYISMIESVDSLKLLKEIEKQAAKHDR-VVKVLL 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+++ + E++KSG+ +C ++E R +++ G+M + D + F
Sbjct: 115 ELHLAEEDTKSGLSLDACRELLEAGEWREMKHVQICGIMMMASNTDDEQQIAQEFDEAAR 174
Query: 145 CRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ KA A+D+ CE S GMS D+ A++ GST VR+G+TIFGPR Y
Sbjct: 175 FFDEI-KARYFADDEAFCERSWGMSHDYHIAVKHGSTMVRVGTTIFGPRIY 224
>gi|402832520|ref|ZP_10881163.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. CM59]
gi|402276856|gb|EJU25952.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. CM59]
Length = 243
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 94/161 (58%), Gaps = 8/161 (4%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K +L + V+ + +A L + +S GR+ + V +QVNTSGEE
Sbjct: 77 HFIGHLQTNKIKEILRY--EVSCVQSLDRYDLAEKLHQKLSQAGRE-MDVFIQVNTSGEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVCKAL 153
SK G+ P + L + V + P L GLMTIG+ + + F+ L + E+ AL
Sbjct: 134 SKFGVAPEAALELTRQV-AQLPTLHIRGLMTIGLFSAEEDKVRKCFQLLKRIQQEII-AL 191
Query: 154 GMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + Q ELSMGMSGD E AI G+T VR+G+ IFG R Y
Sbjct: 192 NLPDVQPYELSMGMSGDLEIAIAEGATIVRVGTAIFGQRIY 232
>gi|145642000|ref|ZP_01797572.1| hypothetical protein CGSHiR3021_00702 [Haemophilus influenzae
R3021]
gi|148825633|ref|YP_001290386.1| hypothetical protein CGSHiEE_02835 [Haemophilus influenzae PittEE]
gi|386265542|ref|YP_005829034.1| hypothetical protein R2846_0553 [Haemophilus influenzae R2846]
gi|145273271|gb|EDK13145.1| hypothetical protein CGSHiR3021_00702 [Haemophilus influenzae
22.4-21]
gi|148715793|gb|ABQ98003.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
PittEE]
gi|309972778|gb|ADO95979.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 237
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 10/187 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+ +++WHF+G LQSNK + + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVEKIQYFESQNI--NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S EESKSGI P L + +H+ P+L GLM I P D
Sbjct: 112 EQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLILAKHIE-NLPHLCLRGLMAIPAPTD 169
Query: 132 YTSTPEN-FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ E FR + + ++ +AL + LSMGM+ D AI+ GST VRIG+ IFG
Sbjct: 170 KIAEQEAVFRKMSDLFEQLKQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGA 228
Query: 191 REYAKKQ 197
R Y+ Q
Sbjct: 229 RNYSTSQ 235
>gi|78189315|ref|YP_379653.1| hypothetical protein Cag_1350 [Chlorobium chlorochromatii CaD3]
gi|78171514|gb|ABB28610.1| Protein of unknown function UPF0001 [Chlorobium chlorochromatii
CaD3]
Length = 229
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 96/178 (53%), Gaps = 19/178 (10%)
Query: 23 FIDKYNLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV--S 76
F++KY I+WHF+GHLQSNK ++L+G V ++ G+ A L K
Sbjct: 62 FLEKYESRALQGCPIQWHFIGHLQSNKVRSLVGKV---SLIHGIDKLSTAEELSKRAVQQ 118
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
NL + L++VNTSGE SK G+ P + L PN+ GLMTI + +
Sbjct: 119 NL---TVDYLLEVNTSGEASKYGMAPHTVLSEASAF-FALPNVRLRGLMTIATYEREAAR 174
Query: 137 ENFRTLLNCRAEVCKALGMAEDQC---ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F+ L R + + +A D ELSMGMSGDFE+AI+ G+T +R+GS IFG R
Sbjct: 175 REFQEL---RELLEQLQAIAPDPTLVTELSMGMSGDFEEAIQEGATMIRVGSAIFGWR 229
>gi|227498577|ref|ZP_03928721.1| alanine racemase [Acidaminococcus sp. D21]
gi|352684238|ref|YP_004896223.1| alanine racemase [Acidaminococcus intestini RyC-MR95]
gi|226904033|gb|EEH89951.1| alanine racemase [Acidaminococcus sp. D21]
gi|350278893|gb|AEQ22083.1| alanine racemase [Acidaminococcus intestini RyC-MR95]
Length = 234
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+ WH +GHLQ+NKAK V + D++E + KI HLD+A +G K VL+Q
Sbjct: 70 LPKRGHWHLIGHLQTNKAKH---AVEHFDLIESADSAKILTHLDRAAEQVG-KVQDVLLQ 125
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
+N +GE KSG P+ IV+ + P+L G+M I T E R + E
Sbjct: 126 INEAGESQKSGFQPADFRAIVKTLDA-YPHLRVRGVMVIAQA--TDQVEETRPVFRAGYE 182
Query: 149 VCKALGMA---EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L A ED LSMGM+ D+ A+E G+ +R+GS +FG R+Y K
Sbjct: 183 DFLFLRDALKHEDVNILSMGMTHDYWIAVEEGANEIRVGSALFGARDYTLK 233
>gi|375133780|ref|YP_004994430.1| hypothetical protein BDGL_000162 [Acinetobacter calcoaceticus
PHEA-2]
gi|325121225|gb|ADY80748.1| conserved hypothetical protein [Acinetobacter calcoaceticus PHEA-2]
Length = 230
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L N + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGN-DQSALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEEVAELVGQMS-QLPKIKLRGLMVIPAPDNTAAFADAKALFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHTHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|114332299|ref|YP_748521.1| hypothetical protein Neut_2339 [Nitrosomonas eutropha C91]
gi|114309313|gb|ABI60556.1| Protein of unknown function UPF0001 [Nitrosomonas eutropha C91]
Length = 238
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 14 KKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK 73
++ L+K+ D LP I+WHF+G +QSNK K + N V G+ EKIA L
Sbjct: 60 QEGLVKIRALAD---LP--IEWHFIGPIQSNKTKLI---AENFSWVHGIDREKIATRLSA 111
Query: 74 AVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT 133
A PL+V VQVN SGE +KSG+DP + V P L+ G+M + P+ T
Sbjct: 112 ARPE-SLPPLQVCVQVNVSGEITKSGVDPEKAAELAAFVS-EQPRLQLRGIMAV--PELT 167
Query: 134 STPENFRTLLNCRAEVCKAL---GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ R EV + L G D LSMGMS D E AI G+T VRIG+ IFG
Sbjct: 168 AVTALQREQFQMMREVYEQLKQKGFILDT--LSMGMSEDLENAIAEGATMVRIGTAIFGQ 225
Query: 191 REYA 194
R YA
Sbjct: 226 RRYA 229
>gi|125973310|ref|YP_001037220.1| hypothetical protein Cthe_0792 [Clostridium thermocellum ATCC
27405]
gi|256003791|ref|ZP_05428779.1| alanine racemase domain protein [Clostridium thermocellum DSM 2360]
gi|281417513|ref|ZP_06248533.1| alanine racemase domain protein [Clostridium thermocellum JW20]
gi|385778777|ref|YP_005687942.1| alanine racemase [Clostridium thermocellum DSM 1313]
gi|419723206|ref|ZP_14250341.1| protein of unknown function UPF0001 [Clostridium thermocellum AD2]
gi|419724890|ref|ZP_14251945.1| protein of unknown function UPF0001 [Clostridium thermocellum YS]
gi|125713535|gb|ABN52027.1| alanine racemase domain protein [Clostridium thermocellum ATCC
27405]
gi|255992352|gb|EEU02446.1| alanine racemase domain protein [Clostridium thermocellum DSM 2360]
gi|281408915|gb|EFB39173.1| alanine racemase domain protein [Clostridium thermocellum JW20]
gi|316940457|gb|ADU74491.1| alanine racemase domain protein [Clostridium thermocellum DSM 1313]
gi|380771510|gb|EIC05375.1| protein of unknown function UPF0001 [Clostridium thermocellum YS]
gi|380780973|gb|EIC10636.1| protein of unknown function UPF0001 [Clostridium thermocellum AD2]
Length = 234
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 11/162 (6%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
KWH +GHLQ+NK K + V + ++ V ++A + K ++G K + VLVQVN SG
Sbjct: 79 KWHLIGHLQTNKVKYI---VDKVSLIHSVDRIELAREIQKRAESVG-KTVDVLVQVNVSG 134
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKAL 153
E+SK G+ G+V + PN+ GLMT M Y PE+ R + + ++ +
Sbjct: 135 EKSKFGVSVDDAYGLVREISF-MPNIRVKGLMT--MAPYAENPESVRYVFSKLRDLSIDI 191
Query: 154 GMAE-DQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G + D LSMGMS DFE AIE G+ VRIG+ +FG R
Sbjct: 192 GKEKFDNSNMEILSMGMSNDFEIAIEEGANMVRIGTALFGSR 233
>gi|375337663|ref|ZP_09779007.1| hypothetical protein SbacW_12167 [Succinivibrionaceae bacterium
WG-1]
Length = 236
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD-KAVSNLGRKPLKVLVQVN 90
DIKWHF+G QSNK K + + D+++ + KIA ++ + LG +++++QVN
Sbjct: 76 DIKWHFIGPCQSNKTKLI---AEHFDVIQSIDRLKIAERINNQHPQELG--TVEIMIQVN 130
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAE 148
S E KSG+ S ++ + +CP L+ GLM I D + F+ L N + E
Sbjct: 131 ISNEAQKSGVSISDTPELIAQITEKCPMLKIIGLMGIAEDTTDTSKITAQFQALQNLKNE 190
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ D +LSMGMS D ++AI GST VRIG+ IFG R+Y+K
Sbjct: 191 LSFKY---PDITQLSMGMSNDMQEAISAGSTMVRIGTAIFGARDYSK 234
>gi|365175686|ref|ZP_09363113.1| YggS family pyridoxal phosphate enzyme [Synergistes sp. 3_1_syn1]
gi|363612254|gb|EHL63799.1| YggS family pyridoxal phosphate enzyme [Synergistes sp. 3_1_syn1]
Length = 234
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E WH +GHLQ NK + L + D++E V + + A L++ +S + V ++VN
Sbjct: 74 ESCPWHMIGHLQRNKIRRAL---ESFDLIESVDSLETAVGLNRVLSEGEPRSFPVFIEVN 130
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAE 148
S E +KSGI P +++ + CP + +GLMT+ D E F L R +
Sbjct: 131 MSREAAKSGIAPEETERLLDDMMKSCPLIAVNGLMTVAEDTEDERVLRETFSGLRELREK 190
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ +A G+ ELSMGMSGD+ A+E GST VR+GS IFGPR Y
Sbjct: 191 LRRAAGLP--LPELSMGMSGDYMIAVEEGSTIVRVGSAIFGPRNY 233
>gi|325298083|ref|YP_004258000.1| hypothetical protein [Bacteroides salanitronis DSM 18170]
gi|324317636|gb|ADY35527.1| protein of unknown function UPF0001 [Bacteroides salanitronis DSM
18170]
Length = 224
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 25 DKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
+KYN LP+DI+WHF+GHLQ+NK K + P + ++E V + K+ ++K R +
Sbjct: 53 EKYNVLPKDIEWHFIGHLQTNKVKYI---APYITLIEAVDSYKLLTEINKQAGKHNR-TI 108
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGM--PDYTSTPENFR 140
L++++ + EESK G P C ++E + N+ +G+M + D FR
Sbjct: 109 PCLLEIHVAQEESKYGFTPDDCREMLEAGEWKELHNIRIAGVMGMATNTDDEAQIEREFR 168
Query: 141 TLLNCRAEVCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
TL E +A E E+SMGMS D+ AI GST VR+GS IFG R Y K
Sbjct: 169 TLKALFDEWKQAFFADEPAFKEISMGMSHDYRIAIRAGSTLVRVGSKIFGERNYVK 224
>gi|323345163|ref|ZP_08085387.1| cell division protein YlmE [Prevotella oralis ATCC 33269]
gi|323094433|gb|EFZ37010.1| cell division protein YlmE [Prevotella oralis ATCC 33269]
Length = 224
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 8/170 (4%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DI+WHF+GHLQ+NK K + VP + M++ V + K+ +DK + GR ++V++
Sbjct: 59 TLPKDIEWHFIGHLQTNKVKHI---VPYISMIDAVDSLKLLREIDKQAARCGR-VIRVML 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+++ + EE+K G CL ++ R N++ GLM + + D + F +
Sbjct: 115 ELHIAEEETKYGFSRQDCLDMLAGGAWRELHNVQICGLMMMASNVDDEAQIAKEFDEAAD 174
Query: 145 CRAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
EV + +D CE S GMS D+ A++ GST VR+G+ IFGPR Y
Sbjct: 175 LFREVKQRFFADDDAFCERSWGMSHDYRIAVKHGSTMVRVGTGIFGPRVY 224
>gi|288817913|ref|YP_003432260.1| alanine racemase domain protein [Hydrogenobacter thermophilus TK-6]
gi|384128674|ref|YP_005511287.1| alanine racemase [Hydrogenobacter thermophilus TK-6]
gi|288787312|dbj|BAI69059.1| alanine racemase domain protein [Hydrogenobacter thermophilus TK-6]
gi|308751511|gb|ADO44994.1| alanine racemase domain protein [Hydrogenobacter thermophilus TK-6]
Length = 223
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 23 FIDKYNLPEDIK--WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
F+ KY EDI WHF+G LQSNK K +LG V ++ + + +A ++K + +
Sbjct: 60 FLKKYQALEDIAIDWHFIGRLQSNKVKYILGKV---SLIHSLDRDSLAQEINKRANVVQ- 115
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR 140
VL++VN +GE++K GI P + L +H+ L NL GLM I P YT PE R
Sbjct: 116 ---NVLIEVNVAGEKTKGGIVPENLLAFYQHL-LSYKNLRVLGLMCI--PPYTEDPEKAR 169
Query: 141 TLLNCRAEVCKALG--MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ + L LSMGMS DFE AIE G+T VRIG+ +FG R
Sbjct: 170 PYFAKLRELKEKLESEFLVKLPHLSMGMSTDFEVAIEEGATIVRIGTLLFGER 222
>gi|386320648|ref|YP_006016810.1| hypothetical protein RIA_0284 [Riemerella anatipestifer RA-GD]
gi|325335191|gb|ADZ11465.1| Predicted enzyme with a TIM-barrel fold [Riemerella anatipestifer
RA-GD]
Length = 234
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WH +GHLQ+NK K + P + ++ V +EK+ +DK ++ + +L+Q
Sbjct: 74 LPSDIQWHLIGHLQTNKVKYI---APFIHTIQSVDSEKLLQEIDKQAGK-HKRLINILLQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
V + E++K+G++ + + ++ PN++ GLM GM +T R +
Sbjct: 130 VKIAEEDTKTGLEVNEVKELCVKIKQGEFPNIKLQGLM--GMATFTDDETQIRREFSFLK 187
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ L + LSMGMSGDF AIE G+ S+R+GS IFG R Y
Sbjct: 188 QLYDYLSDSHQLNTLSMGMSGDFPLAIECGANSIRVGSAIFGARNY 233
>gi|387771572|ref|ZP_10127731.1| pyridoxal phosphate enzyme, YggS family [Haemophilus
parahaemolyticus HK385]
gi|386908622|gb|EIJ73311.1| pyridoxal phosphate enzyme, YggS family [Haemophilus
parahaemolyticus HK385]
Length = 230
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 93/166 (56%), Gaps = 10/166 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
++WHF+G LQSNK++ + + D ++ V KIA L D+ +L PL VL+Q+N
Sbjct: 72 LEWHFIGPLQSNKSRLV---AEHFDWIQTVDRFKIAERLNDQRPEHL--PPLNVLIQINI 126
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
S E SKSGI P + E + + P L+ GLM I P+ S PE + L ++
Sbjct: 127 SDESSKSGIQPEEMFSLAEKIS-QFPRLKLRGLMAIPKPE--SEPEQQKIALRKMKDLFN 183
Query: 152 ALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L + + LSMGMS D AI+ GST VRIG+ IFG R Y++K
Sbjct: 184 RLQQRFESVDTLSMGMSDDMASAIDCGSTMVRIGTAIFGERNYSQK 229
>gi|325270978|ref|ZP_08137565.1| proline synthetase associated protein [Prevotella multiformis DSM
16608]
gi|324986775|gb|EGC18771.1| proline synthetase associated protein [Prevotella multiformis DSM
16608]
Length = 223
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+GHLQ+NK K + P + M+E V + K+ ++K + GR ++VL++
Sbjct: 59 LPKDIEWHFIGHLQTNKVKYI---APYISMIEAVDSLKLLKEINKQAARHGR-VIRVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
++ + EESK G P++C ++E+ R N+ SGLM M R + A
Sbjct: 115 LHIAEEESKYGFSPAACRELLENGEWRALRNVHISGLMM--MASNVEDRSQIRREMTLAA 172
Query: 148 EV---CKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ KA A+D E S GMS D++ A+E ST VR+G+ IFGPR Y
Sbjct: 173 DLFDELKAKYFADDPEFKERSWGMSHDYDIAVECRSTMVRVGTAIFGPRVY 223
>gi|260642854|ref|ZP_05417592.2| pyridoxal phosphate enzyme, YggS family [Bacteroides finegoldii DSM
17565]
gi|260620282|gb|EEX43153.1| pyridoxal phosphate enzyme, YggS family [Bacteroides finegoldii DSM
17565]
Length = 226
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQSNK K + +P + M+ G+ K+ ++K
Sbjct: 49 KVQEMTAKYESLPKDIEWHFIGHLQSNKIKYM---IPYVAMIHGIDTYKLLAEVNKQAGK 105
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EE+K G P C +++ + ++ GLM GM T
Sbjct: 106 AGR-TVNCLLQIHVAQEETKFGFSPEECREMLDAGEWKALAHVRICGLM--GMASNTDNI 162
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E FR L + E+ + D ELSMGMS D+ +AI GST VR+GS IFG R
Sbjct: 163 EQINGEFRLLSSLFKEIKENWFADSDVFRELSMGMSHDYHEAIASGSTLVRVGSKIFGER 222
Query: 192 EY 193
EY
Sbjct: 223 EY 224
>gi|330446899|ref|ZP_08310550.1| alanine racemase, N-terminal domain protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328491090|dbj|GAA05047.1| alanine racemase, N-terminal domain protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 236
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 14/166 (8%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNTSG 93
WHF+G +QSNK + + + D V + K A L D+ +N+ PL+VL+QVN++
Sbjct: 80 WHFIGPIQSNKTRLV---AEHFDWVHSIDRVKTAKRLSDQRPANMA--PLQVLLQVNSND 134
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCK 151
EE+KSG+ + + + PN+E GLM+I P D+ S F+TL ++ +
Sbjct: 135 EETKSGVSLAELPALAAEIA-AMPNIELRGLMSIPQPATDFDSQFATFKTL----SDALE 189
Query: 152 ALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
L Q + LSMGMS D E AI GST VRIG+ IFG R+Y++K
Sbjct: 190 QLKTTYPQVDTLSMGMSDDMEAAIAAGSTIVRIGTAIFGARDYSQK 235
>gi|308050653|ref|YP_003914219.1| alanine racemase [Ferrimonas balearica DSM 9799]
gi|307632843|gb|ADN77145.1| alanine racemase domain protein [Ferrimonas balearica DSM 9799]
Length = 227
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 87/162 (53%), Gaps = 8/162 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G LQSNK + + D + V KIA L + + G+ PL V +QVN
Sbjct: 73 DIRWHFIGPLQSNKTRPV---AERFDWIHSVDRLKIAQRLSEQRPS-GKAPLNVCIQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
S E+SKSG++P+ + V P L GLM I P+ S PE R L ++
Sbjct: 129 SAEQSKSGVNPAQLPELAAAVAA-LPGLRLRGLMAIPAPE--SDPEKQRQALAQMKQLFD 185
Query: 152 ALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
AL + LSMGMS D E A+ GST VRIG+ IFG R+
Sbjct: 186 ALKAEHPGLDTLSMGMSDDLEAAVAEGSTMVRIGTAIFGTRK 227
>gi|300313097|ref|YP_003777189.1| enzyme with a TIM-barrel fold protein [Herbaspirillum seropedicae
SmR1]
gi|300075882|gb|ADJ65281.1| enzyme with a TIM-barrel fold protein [Herbaspirillum seropedicae
SmR1]
Length = 233
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
++WHF+G +QSNK + + + D V V KIA L ++ + LG L V +QVN
Sbjct: 78 LQWHFIGPIQSNKTRPI---AEHFDWVHSVDRLKIAQRLSEQRPAALGA--LNVCLQVNI 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEV 149
SGE+SKSG+DP+ + V + P L+ GLM I P D T F + + A++
Sbjct: 133 SGEDSKSGLDPAELPAVAAQVA-QLPGLKLRGLMAIPAPSEDVTQQRAAFAAVRSLLAQL 191
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+A G+A D LSMGMS D + A+ G++ VRIGS IFG R YA
Sbjct: 192 -QAQGLALD--TLSMGMSADLDAAVAEGASIVRIGSAIFGARHYA 233
>gi|313148210|ref|ZP_07810403.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424664022|ref|ZP_18101059.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
616]
gi|313136977|gb|EFR54337.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404576058|gb|EKA80798.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
616]
Length = 222
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+ G+ + K+ ++K GR ++ L+
Sbjct: 57 SLPKDIEWHFIGHLQTNKIKYM---APYVSMIHGIDSYKLLAEVNKQAIKAGR-VIRCLL 112
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPEN----FRTL 142
Q++ + EE+K G C ++ + N++ GLM GM T + E FR+L
Sbjct: 113 QIHIAQEETKFGFSFDECKEMLNADEWKALANIQICGLM--GMATNTDSKEQIEREFRSL 170
Query: 143 LNCRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
NC K A++ CELSMGMS D+ AI GST VR+GS IFG R Y
Sbjct: 171 -NCFFHEVKKQYFADEPTFCELSMGMSHDYHLAIAEGSTLVRVGSKIFGERVY 222
>gi|90415261|ref|ZP_01223195.1| hypothetical protein GB2207_08096 [gamma proteobacterium HTCC2207]
gi|90332584|gb|EAS47754.1| hypothetical protein GB2207_08096 [marine gamma proteobacterium
HTCC2207]
Length = 257
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQV 89
E++ WHF+G LQSNK + N V V KIA L D+ +LG PL + +QV
Sbjct: 98 ENLCWHFIGPLQSNKTRN---AAENFSWVHSVDRLKIAQRLSDQRPESLG--PLNICLQV 152
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
N E SKSG + L I + + PNL GLM I P T++ + + N AE+
Sbjct: 153 NIDNEPSKSGFLVDALLPIALQI-AKLPNLRLRGLMAI--PRATNSVQEQQAAFNKLAEL 209
Query: 150 CKALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
C+ + + D E LSMGMSGD E AI GST VR+G+ IFG RE
Sbjct: 210 CQQINQSLDNSEKLDTLSMGMSGDLEAAISQGSTMVRVGTDIFGKRE 256
>gi|445408187|ref|ZP_21432589.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-57]
gi|444780790|gb|ELX04718.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-57]
Length = 230
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P ++ GLM I PD T + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTGAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|251791951|ref|YP_003006671.1| hypothetical protein NT05HA_0146 [Aggregatibacter aphrophilus
NJ8700]
gi|422336890|ref|ZP_16417862.1| hypothetical protein HMPREF9335_01050 [Aggregatibacter aphrophilus
F0387]
gi|247533338|gb|ACS96584.1| conserved hypothetical protein [Aggregatibacter aphrophilus NJ8700]
gi|353345900|gb|EHB90189.1| hypothetical protein HMPREF9335_01050 [Aggregatibacter aphrophilus
F0387]
Length = 234
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ ++++ ++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQYCQQHDI--SLEWHFIGPLQSNKTRLV---AEYFDWMQTLERAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + PL VL+Q+N S E +KSGI PS L + +H+ P+L GLM I P
Sbjct: 113 EQRPPY-KAPLNVLIQINISQEATKSGIQPSDMLTLAKHIE-NLPHLRLRGLMAIPEPTD 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + ++ +AL A+ LSMGM+ D + AI+ GST VRIG+ IFG
Sbjct: 171 DVAQQEQTFCQMKTLFEQLQQALPNAQIDT-LSMGMTDDMQSAIKCGSTMVRIGTAIFGK 229
Query: 191 REYAK 195
R+Y K
Sbjct: 230 RDYVK 234
>gi|423277872|ref|ZP_17256786.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
610]
gi|404586747|gb|EKA91308.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
610]
Length = 222
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+ G+ + K+ ++K GR ++ L+
Sbjct: 57 SLPKDIEWHFIGHLQTNKIKYM---APYVSMIHGIDSYKLLAEVNKQAIKAGR-VIRCLL 112
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPEN----FRTL 142
Q++ + EE+K G C ++ + N++ GLM GM T + E FR+L
Sbjct: 113 QIHIAQEETKFGFSFDECKEMLNADEWKALANIQICGLM--GMATNTDSKEQIEREFRSL 170
Query: 143 LNCRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
NC K A++ CELSMGMS D+ AI GST VR+GS IFG R Y
Sbjct: 171 -NCFFHEVKKQYFADEPTFCELSMGMSHDYRLAIAEGSTLVRVGSKIFGERVY 222
>gi|384142135|ref|YP_005524845.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|347592628|gb|AEP05349.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
Length = 235
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 78 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P ++ GLM I PD T + + L + V
Sbjct: 134 DGQESKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTGAFADAKKLFDA---VKV 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 190 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 234
>gi|386742595|ref|YP_006215774.1| PLP-binding domain-containing protein [Providencia stuartii MRSN
2154]
gi|384479288|gb|AFH93083.1| PLP-binding domain-containing protein [Providencia stuartii MRSN
2154]
Length = 231
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 96/180 (53%), Gaps = 16/180 (8%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSN 77
K+ F D+ +D+ WHF+G LQSNK++ + + D + +KIA L D+ SN
Sbjct: 64 KIQFFADR----QDLVWHFIGPLQSNKSRLV---AEHFDWFHTLDRQKIAQRLNDQRPSN 116
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTST 135
+ PL VL+Q+N S E SKSGI + + V + PNL F GLMTI P DY
Sbjct: 117 --KAPLNVLIQINISDENSKSGIKLEELDELAKQVS-QMPNLVFRGLMTIPAPESDYQRQ 173
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E FR + ++ + LSMGM+ D AI GST VRIG+ IFG R+Y K
Sbjct: 174 CEAFRKMEQAYQQLQTHYPSVD---TLSMGMTDDMAAAIHCGSTLVRIGTAIFGARDYHK 230
>gi|392544488|ref|ZP_10291625.1| PLP-binding domain-containing protein [Pseudoalteromonas piscicida
JCM 20779]
Length = 227
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 95/165 (57%), Gaps = 16/165 (9%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGRKPLKVLVQVNT 91
I+WHF+G +QSNK++ + N V+ V EKIA L++ +NL KPLKVL+QVN
Sbjct: 74 IEWHFIGPIQSNKSRLV---AENFHWVQSVDREKIARRLNEQRPTNL--KPLKVLLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SG+++KSG P+ + + + C LE GLMTI T ++ + L ++
Sbjct: 129 SGDDNKSGCHPNEVDTLAQFIN-DCRQLELRGLMTI-----TEQTDDKQKQLQYFQQMRA 182
Query: 152 ALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+DQ + LSMGMSGD + AI GST VRIG+ IFG R+
Sbjct: 183 CFDRLKDQYQQLDTLSMGMSGDLDTAIAAGSTMVRIGTDIFGKRQ 227
>gi|410466356|ref|ZP_11319278.1| putative TIM-barrel fold containing enzyme [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409980823|gb|EKO37492.1| putative TIM-barrel fold containing enzyme [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 229
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 30 PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
P + WHF+GHLQ NKAK +G D++ V N ++A+ L K ++ + V +QV
Sbjct: 72 PAGLSWHFIGHLQRNKAKLAVG---RFDLIHTVDNVELAHILQKRAADQ-QLTQAVCLQV 127
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
N +GE KSG+ P + E V CPNL GLM I P PE R ++
Sbjct: 128 NVAGEAQKSGVAPEGLDALAEAV-AECPNLRLDGLMVI--PPVFDDPEGARPAFARLRQL 184
Query: 150 CKALG--MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
AL + LSMGMSGD E A+ G+T VR+G+ +FGPR
Sbjct: 185 RDALASRLGRPLPTLSMGMSGDLEAAVTEGATHVRVGTDLFGPR 228
>gi|169634028|ref|YP_001707764.1| hypothetical protein ABSDF2533 [Acinetobacter baumannii SDF]
gi|169152820|emb|CAP01843.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 235
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 78 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P ++ GLM I PD T + + L + V
Sbjct: 134 DGQESKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTGAFADAKKLFDA---VKV 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 190 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 234
>gi|151946358|gb|EDN64580.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408862|gb|EDV12127.1| hypothetical protein SCRG_02999 [Saccharomyces cerevisiae RM11-1a]
gi|207347852|gb|EDZ73897.1| YBL036Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272725|gb|EEU07698.1| YBL036C-like protein [Saccharomyces cerevisiae JAY291]
gi|259144811|emb|CAY77750.1| EC1118_1B15_0870p [Saccharomyces cerevisiae EC1118]
gi|323338793|gb|EGA80008.1| YBL036C-like protein [Saccharomyces cerevisiae Vin13]
gi|323349874|gb|EGA84087.1| YBL036C-like protein [Saccharomyces cerevisiae Lalvin QA23]
gi|365767037|gb|EHN08525.1| YBL036C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 257
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVL 86
LP+DIKWHF+G LQ+NK K L VPNL VE + + K A L+++ + P+
Sbjct: 82 LPDDIKWHFIGGLQTNKCKDL-AKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCN 140
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E+ KSG++ + + V L C ++ +GLMTIG + + + EN F
Sbjct: 141 VQINTSREDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFA 200
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+ + ++ G + +LSMGMS DF +AI G+ VRIG+ IFG R
Sbjct: 201 TLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIFGAR 248
>gi|89074107|ref|ZP_01160606.1| Predicted enzyme with a TIM-barrel fold [Photobacterium sp. SKA34]
gi|89050043|gb|EAR55569.1| Predicted enzyme with a TIM-barrel fold [Photobacterium sp. SKA34]
Length = 236
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 20/184 (10%)
Query: 24 IDKYNL----PED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVS 76
+DK N PE+ + WHF+G +QSNK + + + D V + K A L D+ +
Sbjct: 63 VDKVNHFSGHPENNLLVWHFIGPIQSNKTRLV---AEHFDWVHSIDRIKTAKRLNDQRPT 119
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTS 134
++ PL+VL+QVN+S E +KSGI + + + PN+E GLM+I P DY S
Sbjct: 120 SMA--PLQVLLQVNSSAEATKSGITLAEVPALAAEIA-AMPNIELRGLMSIPQPATDYDS 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F+ L A+ + L + + LSMGMSGD E AI GST VRIG+ IFG R+Y
Sbjct: 177 QFATFKAL----ADTLEQLKLTYPNVDTLSMGMSGDMEAAIAAGSTIVRIGTAIFGARDY 232
Query: 194 AKKQ 197
K+
Sbjct: 233 GNKE 236
>gi|50084121|ref|YP_045631.1| hypothetical protein ACIAD0913 [Acinetobacter sp. ADP1]
gi|49530097|emb|CAG67809.1| conserved hypothetical protein; putative enzyme [Acinetobacter sp.
ADP1]
Length = 234
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 85/164 (51%), Gaps = 8/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + PL + +QVN
Sbjct: 78 DIEWHFIGHVQRNKTKLL---AEKFDWVHGVDRLIIAERLSSQRLQ-TQPPLNLCIQVNI 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
++SK G P +VE + + P + G+M I PD + + + L +V
Sbjct: 134 DHQDSKDGCQPEDVAQLVEEIS-QLPQVRLRGIMVIPAPDQITAFTDAKQLFE---QVKS 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+D LSMGMSGD +QAI G++ VRIG+ +FG R+YAK
Sbjct: 190 HHQQPQDWDTLSMGMSGDLQQAIAAGASIVRIGTALFGARDYAK 233
>gi|6319435|ref|NP_009517.1| hypothetical protein YBL036C [Saccharomyces cerevisiae S288c]
gi|586419|sp|P38197.1|YBD6_YEAST RecName: Full=UPF0001 protein YBL036C
gi|157830174|pdb|1B54|A Chain A, Crystal Structure Of A Yeast Hypothetical Protein-A
Structure From Bnl's Human Proteome Project
gi|463272|emb|CAA55058.1| YBL0413 [Saccharomyces cerevisiae]
gi|536047|emb|CAA84856.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810298|tpg|DAA07083.1| TPA: hypothetical protein YBL036C [Saccharomyces cerevisiae S288c]
gi|349576344|dbj|GAA21515.1| K7_Ybl036cp [Saccharomyces cerevisiae Kyokai no. 7]
gi|392301180|gb|EIW12269.1| hypothetical protein CENPK1137D_4887 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 257
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVL 86
LP+DIKWHF+G LQ+NK K L VPNL VE + + K A L+++ + P+
Sbjct: 82 LPDDIKWHFIGGLQTNKCKDL-AKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCN 140
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E+ KSG++ + + V L C ++ +GLMTIG + + + EN F
Sbjct: 141 VQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFA 200
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+ + ++ G + +LSMGMS DF +AI G+ VRIG+ IFG R
Sbjct: 201 TLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIFGAR 248
>gi|323310167|gb|EGA63359.1| YBL036C-like protein [Saccharomyces cerevisiae FostersO]
Length = 231
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVL 86
LP+DIKWHF+G LQ+NK K L VPNL VE + + K A L+++ + P+
Sbjct: 56 LPDDIKWHFIGGLQTNKCKDL-AKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCN 114
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E+ KSG++ + + V L C ++ +GLMTIG + + + EN F
Sbjct: 115 VQINTSXEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFA 174
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+ + ++ G + +LSMGMS DF +AI G+ VRIG+ IFG R
Sbjct: 175 TLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIFGAR 222
>gi|184157169|ref|YP_001845508.1| TIM-barrel fold family protein [Acinetobacter baumannii ACICU]
gi|332874170|ref|ZP_08442094.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6014059]
gi|384130846|ref|YP_005513458.1| TIM-barrel fold family protein [Acinetobacter baumannii 1656-2]
gi|385236435|ref|YP_005797774.1| TIM-barrel fold family protein [Acinetobacter baumannii
TCDC-AB0715]
gi|387124917|ref|YP_006290799.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
MDR-TJ]
gi|407931774|ref|YP_006847417.1| pyridoxal phosphate protein [Acinetobacter baumannii TYTH-1]
gi|416146293|ref|ZP_11601067.1| TIM-barrel fold family protein [Acinetobacter baumannii AB210]
gi|417570990|ref|ZP_12221847.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC189]
gi|417576068|ref|ZP_12226913.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-17]
gi|417871839|ref|ZP_12516763.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH1]
gi|417872569|ref|ZP_12517467.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH2]
gi|417876975|ref|ZP_12521717.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH3]
gi|417883049|ref|ZP_12527317.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH4]
gi|421202176|ref|ZP_15659327.1| tim-barrel fold family protein [Acinetobacter baumannii AC12]
gi|421535718|ref|ZP_15981977.1| TIM-barrel fold family protein [Acinetobacter baumannii AC30]
gi|421631114|ref|ZP_16071803.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC180]
gi|421689202|ref|ZP_16128886.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-143]
gi|421702514|ref|ZP_16141994.1| hypothetical protein B825_04631 [Acinetobacter baumannii ZWS1122]
gi|421706325|ref|ZP_16145741.1| hypothetical protein B837_04641 [Acinetobacter baumannii ZWS1219]
gi|421792474|ref|ZP_16228627.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-2]
gi|424053397|ref|ZP_17790929.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab11111]
gi|424062947|ref|ZP_17800432.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab44444]
gi|425752545|ref|ZP_18870452.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-113]
gi|445481253|ref|ZP_21455789.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-78]
gi|183208763|gb|ACC56161.1| predicted enzyme with a TIM-barrel fold [Acinetobacter baumannii
ACICU]
gi|322507066|gb|ADX02520.1| TIM-barrel fold family protein [Acinetobacter baumannii 1656-2]
gi|323516933|gb|ADX91314.1| TIM-barrel fold family protein [Acinetobacter baumannii
TCDC-AB0715]
gi|332737645|gb|EGJ68548.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6014059]
gi|333366397|gb|EGK48411.1| TIM-barrel fold family protein [Acinetobacter baumannii AB210]
gi|342224401|gb|EGT89437.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH1]
gi|342233481|gb|EGT98209.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH2]
gi|342236601|gb|EGU01115.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH4]
gi|342236662|gb|EGU01173.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH3]
gi|385879409|gb|AFI96504.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
MDR-TJ]
gi|395551438|gb|EJG17447.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC189]
gi|395569289|gb|EJG29951.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-17]
gi|398328131|gb|EJN44258.1| tim-barrel fold family protein [Acinetobacter baumannii AC12]
gi|404558582|gb|EKA63863.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-143]
gi|404669185|gb|EKB37092.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab11111]
gi|404674949|gb|EKB42674.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab44444]
gi|407193967|gb|EKE65115.1| hypothetical protein B825_04631 [Acinetobacter baumannii ZWS1122]
gi|407194255|gb|EKE65398.1| hypothetical protein B837_04641 [Acinetobacter baumannii ZWS1219]
gi|407900355|gb|AFU37186.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
TYTH-1]
gi|408695280|gb|EKL40836.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC180]
gi|409986560|gb|EKO42754.1| TIM-barrel fold family protein [Acinetobacter baumannii AC30]
gi|410400054|gb|EKP52234.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-2]
gi|425498776|gb|EKU64842.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-113]
gi|444770606|gb|ELW94756.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-78]
Length = 230
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ESK G P +V + + P ++ GLM I PD T + + L + V
Sbjct: 129 DGQESKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTGAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|403673867|ref|ZP_10936149.1| hypothetical protein ANCT1_04278 [Acinetobacter sp. NCTC 10304]
gi|424060857|ref|ZP_17798348.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab33333]
gi|445491331|ref|ZP_21459646.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
AA-014]
gi|404668809|gb|EKB36718.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab33333]
gi|444764465|gb|ELW88778.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
AA-014]
Length = 230
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFVDAKKLFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+ LSMGMSGD E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEEWDTLSMGMSGDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|193215363|ref|YP_001996562.1| alanine racemase domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088840|gb|ACF14115.1| alanine racemase domain protein [Chloroherpeton thalassium ATCC
35110]
Length = 229
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 23 FIDKYNLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
F+DK P + +WHF GHLQ+NK K + V MV+ + A L K
Sbjct: 62 FLDKVEHPLLANLEPEWHFTGHLQTNKIKYIADKVA---MVQTIDKFATAEALSKRAEKE 118
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
G + +L++VN S E+SK G+ P L E + PN+ GLMTIG PD + +
Sbjct: 119 GL-IVPILLEVNISNEDSKYGVMPEDLLFETEKIH-ELPNVAIHGLMTIGSPDLSDVGKE 176
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F+ + + ++ + E ELSMGMS DF+ AIE G+T VRIG+ IFG R
Sbjct: 177 FQQMRHLLEQIAENSPNPEQVKELSMGMSQDFDIAIEEGATMVRIGTAIFGER 229
>gi|153810902|ref|ZP_01963570.1| hypothetical protein RUMOBE_01286 [Ruminococcus obeum ATCC 29174]
gi|149833298|gb|EDM88380.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus obeum ATCC
29174]
Length = 230
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 24/187 (12%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAK------TLLGGVPNLDMVEGVGNEKIANHL 71
K+ +DKY LP DI+WH +GHLQ NK K L+ V +L + E + NE +++
Sbjct: 56 KVQEIMDKYPQLPSDIRWHMIGHLQRNKVKYIVDKVALIHSVDSLRLAETIENEAAKHNV 115
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
+ +L++VN + EESK G+ L +VE V P++ GLMTI
Sbjct: 116 ----------TVPILIEVNVAQEESKFGLKTEEVLSLVESVAA-LPHINIKGLMTIA--P 162
Query: 132 YTSTPEN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
Y PE FR L ++ + LSMGM+GD++ A++ G+T VR+G+ I
Sbjct: 163 YVEDPEENRGIFRQLKKLSVDIAAKNINNVNMSVLSMGMTGDYQVAVQEGATMVRVGTGI 222
Query: 188 FGPREYA 194
FG R+Y+
Sbjct: 223 FGERDYS 229
>gi|206890646|ref|YP_002249591.1| hypothetical protein THEYE_A1800 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742584|gb|ACI21641.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 236
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 12/174 (6%)
Query: 20 LLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG 79
L FI ++ + I+WH +GHLQSNK K V +++ + +EK+A ++K +G
Sbjct: 67 LKEFIAQWKM--SIEWHMIGHLQSNKVKE---AVRLFEIIHSMDSEKLAILINKEAEKVG 121
Query: 80 RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENF 139
K +VL+QV S EESK G++ ++E PNL+ GLMTI P Y PE+
Sbjct: 122 -KIQRVLIQVKLSQEESKYGVNIDKIEELMEFC-TNLPNLKVEGLMTI--PPYFENPEDS 177
Query: 140 RTLLNCRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++ + L + C ELSMGMS DFE AIE G+T VRIG+ +FG R
Sbjct: 178 RPYFKNLRQIKEILS-QKGYCLKELSMGMSNDFEVAIEEGATMVRIGTALFGQR 230
>gi|260438390|ref|ZP_05792206.1| pyridoxal phosphate enzyme, YggS family [Butyrivibrio crossotus DSM
2876]
gi|292808976|gb|EFF68181.1| pyridoxal phosphate enzyme, YggS family [Butyrivibrio crossotus DSM
2876]
Length = 230
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 97/171 (56%), Gaps = 13/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWH +GHLQ NK KT++ ++ V + ++A + K + LG + VL++
Sbjct: 67 LPKDIKWHMIGHLQRNKVKTVIKEAC---LIHSVDSIRLAEQISKDAATLG-ISVPVLLE 122
Query: 89 VNTSGEESKSGIDPSSC-LGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
VN + EESK G +VE +L PN+ GLMT P T PE+ R
Sbjct: 123 VNIACEESKYGFKAEETEAALVEIAKL--PNITVRGLMT-SAP-ITDNPEDNRIYFKALK 178
Query: 148 EVC---KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
++C KA + + LSMGM+GDFE A+E G+T +R+G+ IFG R+Y+
Sbjct: 179 QLCVDLKAKNIDNTSMDFLSMGMTGDFEVAVEEGATHIRVGTAIFGERDYS 229
>gi|183596314|ref|ZP_02958342.1| hypothetical protein PROSTU_00049 [Providencia stuartii ATCC 25827]
gi|188023918|gb|EDU61958.1| pyridoxal phosphate enzyme, YggS family [Providencia stuartii ATCC
25827]
Length = 231
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 96/180 (53%), Gaps = 16/180 (8%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSN 77
K+ F D+ +D+ WHF+G LQSNK++ + + D + +KIA L D+ SN
Sbjct: 64 KIQFFADR----QDLVWHFIGPLQSNKSRLV---AEHFDWFHTLDRQKIAQRLNDQRPSN 116
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTST 135
+ PL VL+Q+N S E SKSGI + + V + PNL F GLMTI P DY
Sbjct: 117 --KAPLNVLIQINISDENSKSGIKLEEFDELAKQVS-QMPNLVFRGLMTIPAPESDYQRQ 173
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E FR + ++ + LSMGM+ D AI GST VRIG+ IFG R+Y K
Sbjct: 174 CEAFRKMEQAYQQLQTHYPSVD---TLSMGMTDDMAAAIHCGSTLVRIGTAIFGARDYHK 230
>gi|189347291|ref|YP_001943820.1| alanine racemase domain-containing protein [Chlorobium limicola DSM
245]
gi|189341438|gb|ACD90841.1| alanine racemase domain protein [Chlorobium limicola DSM 245]
Length = 229
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 15/176 (8%)
Query: 23 FIDKYNLP----EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD-KAVSN 77
F+DK + P + I+WHF+GHLQSNK ++++G V ++ G+ A L +AV
Sbjct: 62 FLDKESDPLLENQPIRWHFIGHLQSNKVRSIIGKVV---LIHGIDKLSTAEELSGRAV-- 116
Query: 78 LGRKPLKV--LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST 135
R+ L+ L++VNTSGE SK G+ P L + PN GLMTI PD
Sbjct: 117 --RQNLQADYLLEVNTSGEASKYGLKPEELLRQAPSFFM-LPNCTLRGLMTIASPDPALA 173
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
FR+L ++ K ELSMGMS DFE AI G+T +R+G+ IFG R
Sbjct: 174 RYEFRSLSRLLDDLKKIAPDPSTLTELSMGMSQDFEAAIAEGATLIRVGTAIFGWR 229
>gi|319775029|ref|YP_004137517.1| hypothetical protein HICON_03630 [Haemophilus influenzae F3047]
gi|329123064|ref|ZP_08251635.1| YggS family pyridoxal phosphate enzyme [Haemophilus aegyptius ATCC
11116]
gi|317449620|emb|CBY85826.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471995|gb|EGF17435.1| YggS family pyridoxal phosphate enzyme [Haemophilus aegyptius ATCC
11116]
Length = 237
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + E FR + + ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDKIAEQEAMFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+AL + LSMGM+ D AI+ GST VRIG+ IFG R Y+ Q
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARNYSTSQ 235
>gi|183602732|ref|ZP_02964095.1| hypothetical protein BIFLAC_00835 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683168|ref|YP_002469551.1| hypothetical protein BLA_0682 [Bifidobacterium animalis subsp.
lactis AD011]
gi|384194496|ref|YP_005580242.1| alanine racemase domain-containing protein [Bifidobacterium
animalis subsp. lactis BLC1]
gi|387821363|ref|YP_006301406.1| hypothetical protein W7Y_1483 [Bifidobacterium animalis subsp.
lactis B420]
gi|387823046|ref|YP_006302995.1| hypothetical protein W91_1514 [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423680031|ref|ZP_17654907.1| hypothetical protein FEM_15673 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183217970|gb|EDT88618.1| hypothetical protein BIFLAC_00835 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219620818|gb|ACL28975.1| predicted enzyme with a TIM-barrel fold [Bifidobacterium animalis
subsp. lactis AD011]
gi|345283355|gb|AEN77209.1| alanine racemase domain-containing protein [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041030|gb|EHN17543.1| hypothetical protein FEM_15673 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386654064|gb|AFJ17194.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Bifidobacterium animalis
subsp. lactis B420]
gi|386655654|gb|AFJ18783.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Bifidobacterium animalis
subsp. lactis Bi-07]
Length = 285
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 27 YNLPEDIK------WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
Y PED+K +H +G LQSNK +L P ++ VE V + ++A + + GR
Sbjct: 114 YAEPEDLKEAPFIPFHLIGQLQSNKISKIL---PTVNTVESVDSLELAEKIARRCMVRGR 170
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPEN 138
+ VL++VN SGEESKSG P L + E + +E GLMT+G + D E
Sbjct: 171 S-MGVLLEVNESGEESKSGCAPDQALELAEQIAA-LGGVELQGLMTVGAHVRDERRIREG 228
Query: 139 FRTLLNCRAEVCKALGM-AEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F L R E ++LGM +C ELSMGMSGD E AI G+T VR+GS IFG R++
Sbjct: 229 FAHLRGLR-ERIQSLGMPGTARCVELSMGMSGDLEYAIAEGATIVRVGSAIFGERDF 284
>gi|51013199|gb|AAT92893.1| YBL036C [Saccharomyces cerevisiae]
Length = 257
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVL 86
LP+DIKWHF+G LQ+NK K L VPNL VE + + K A L+++ + P+
Sbjct: 82 LPDDIKWHFIGGLQTNKCKDL-AKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCN 140
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E+ KSG++ + + V L C ++ +GLMTIG + + + EN F
Sbjct: 141 VQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFA 200
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+ + ++ G + +LSMGMS DF +AI G+ VRIG+ IFG R
Sbjct: 201 TLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIFGAR 248
>gi|54310240|ref|YP_131260.1| TIM-barrel fold family protein [Photobacterium profundum SS9]
gi|46914681|emb|CAG21458.1| Predicted enzyme with a TIM-barrel fold [Photobacterium profundum
SS9]
Length = 244
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E+I WHF+G +QSNK + + + D V V K A L++ + PL +L+QVN
Sbjct: 87 EEIVWHFIGPIQSNKTRPI---AEHFDWVHSVDRIKTARRLNEQRPS-SMAPLNILLQVN 142
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
TSGEESKSGI + + + + PNL GLM+I P + ++ A+
Sbjct: 143 TSGEESKSGIHVTDLAALADEI-ATMPNLVLRGLMSI--PQKADSYDSQYAAFKLLADAQ 199
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ L + Q + LSMGMSGD + AI GST VRIG+ IFG R+Y
Sbjct: 200 QQLHIKYPQIDTLSMGMSGDMDAAIAAGSTIVRIGTAIFGARDY 243
>gi|229819925|ref|YP_002881451.1| alanine racemase domain-containing protein [Beutenbergia cavernae
DSM 12333]
gi|229565838|gb|ACQ79689.1| alanine racemase domain protein [Beutenbergia cavernae DSM 12333]
Length = 230
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP ++ H +GHLQSNK + L V+ V +E +A LD+ +LGR L V V
Sbjct: 71 DLPHEM--HLIGHLQSNKVRAALAWAT---CVQTVDDEALAVRLDRVAGDLGRS-LDVFV 124
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNC 145
QVNTSGE +KSG P G+ + P+L G MTIG D ++ +L
Sbjct: 125 QVNTSGETTKSGTTPEEAHGLARRIGA-LPSLRLRGFMTIGANSTDVDVVRASYASLARV 183
Query: 146 RAEVC----KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R +V + G+A ELSMGMSGD E A+ G+T VR+G+ +FG R
Sbjct: 184 RDDVVASGDEGTGLAR---ELSMGMSGDLEIAVAAGATMVRLGTAVFGAR 230
>gi|417551230|ref|ZP_12202308.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-18]
gi|417563811|ref|ZP_12214685.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC143]
gi|395555567|gb|EJG21568.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC143]
gi|400385685|gb|EJP48760.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-18]
Length = 230
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTAAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|239909251|ref|YP_002955993.1| hypothetical protein DMR_46160 [Desulfovibrio magneticus RS-1]
gi|239799118|dbj|BAH78107.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 229
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 13/166 (7%)
Query: 30 PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--AVSNLGRKPLKVLV 87
P + WHF+GHLQ NKAK +G D++ V N ++A+ L K A L + V +
Sbjct: 72 PAGLSWHFIGHLQRNKAKLAVG---RFDLIHTVDNVELAHILQKRAAAQQLTQA---VCL 125
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVN +GE KSG+ P + E V CPNL GLM I P PE R
Sbjct: 126 QVNVAGEAQKSGMAPGGLDALAEAVAA-CPNLRLDGLMVI--PPVFDDPEGARPAFARLR 182
Query: 148 EVCKALG--MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ AL + LSMGMSGD E A+ G+T VR+G+ +FGPR
Sbjct: 183 ELRDALASRLGRPLPVLSMGMSGDLEAAVTEGATHVRVGTDLFGPR 228
>gi|163749435|ref|ZP_02156683.1| hypothetical protein KT99_04189 [Shewanella benthica KT99]
gi|161330844|gb|EDQ01771.1| hypothetical protein KT99_04189 [Shewanella benthica KT99]
Length = 242
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+I+WHF+G LQSNK K + + D + V EKIA+ L D+ +L PL + +Q+N
Sbjct: 86 EIEWHFIGPLQSNKTKIIAS---HFDWMHTVSREKIASRLNDQRPKDLC--PLNICIQIN 140
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
S E SKSG P + + + PNL GLM I P TS E R +
Sbjct: 141 ISSETSKSGTTPEELKSLASKID-QMPNLTLRGLMAI--PTATSDKELQRDEFQQLQALY 197
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ L Q + LSMGMS D EQAIE GST VRIGS IFG RE
Sbjct: 198 QELKSLYPQVDTLSMGMSNDLEQAIEQGSTMVRIGSAIFGARE 240
>gi|323306047|gb|EGA59781.1| YBL036C-like protein [Saccharomyces cerevisiae FostersB]
Length = 231
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVL 86
LP+DIKWHF+G LQ+NK K L VPNL VE + + K A L+++ + P+
Sbjct: 56 LPDDIKWHFIGGLQTNKCKDL-AKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCN 114
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E+ KSG++ + + V L C ++ +GLMTIG + + + EN F
Sbjct: 115 VQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFA 174
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+ + ++ G + +LSMGMS DF +AI G+ VRIG+ IFG R
Sbjct: 175 TLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIFGAR 222
>gi|384190136|ref|YP_005575884.1| proline synthetase-associated protein [Bifidobacterium animalis
subsp. lactis BB-12]
gi|384192927|ref|YP_005578674.1| proline synthetase-associated protein [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|289177628|gb|ADC84874.1| proline synthetase-associated protein [Bifidobacterium animalis
subsp. lactis BB-12]
gi|340365664|gb|AEK30955.1| proline synthetase-associated protein [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length = 297
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 27 YNLPEDIK------WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
Y PED+K +H +G LQSNK +L P ++ VE V + ++A + + GR
Sbjct: 126 YAEPEDLKEAPFIPFHLIGQLQSNKISKIL---PTVNTVESVDSLELAEKIARRCMVRGR 182
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPEN 138
+ VL++VN SGEESKSG P L + E + +E GLMT+G + D E
Sbjct: 183 S-MGVLLEVNESGEESKSGCAPDQALELAEQIAA-LGGVELQGLMTVGAHVRDERRIREG 240
Query: 139 FRTLLNCRAEVCKALGM-AEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F L R E ++LGM +C ELSMGMSGD E AI G+T VR+GS IFG R++
Sbjct: 241 FAHLRGLR-ERIQSLGMPGTARCVELSMGMSGDLEYAIAEGATIVRVGSAIFGERDF 296
>gi|29346742|ref|NP_810245.1| hypothetical protein BT_1332 [Bacteroides thetaiotaomicron
VPI-5482]
gi|380695972|ref|ZP_09860831.1| hypothetical protein BfaeM_18682 [Bacteroides faecis MAJ27]
gi|29338639|gb|AAO76439.1| putative racemase [Bacteroides thetaiotaomicron VPI-5482]
Length = 224
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY LP+DI+WHF+GHLQ+NK K + +P ++M+ G+ K+ ++K +
Sbjct: 47 KVQEMTAKYETLPKDIEWHFIGHLQTNKIKYM---IPYVEMIHGIDTYKLLAEVNKQAAK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EE+K G P C ++ + ++ GLM GM T
Sbjct: 104 AGR-IVNCLIQIHVAQEETKFGFSPEECKDMLHAGEWKELSHIRICGLM--GMASNTDDV 160
Query: 137 ENFRT---LLNCRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E LLN + KA A+ ELSMGMS D+ +AI GST VR+GS IFG R
Sbjct: 161 EQINREFCLLNRLFQEIKANWFADSDTFRELSMGMSHDYHEAIAAGSTLVRVGSKIFGER 220
Query: 192 EY 193
Y
Sbjct: 221 NY 222
>gi|327314522|ref|YP_004329959.1| pyridoxal phosphate enzyme, YggS family [Prevotella denticola
F0289]
gi|326944751|gb|AEA20636.1| pyridoxal phosphate enzyme, YggS family [Prevotella denticola
F0289]
Length = 223
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 8/170 (4%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+E V + K+ ++K + GR + VL+
Sbjct: 58 SLPKDIEWHFIGHLQTNKVKYI---APYISMIEAVDSLKLLKEINKQAARYGR-VINVLL 113
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMP-DYTSTPENFRTLLNC 145
+++ + EESK G P++C ++E+ + N+ SGLM + D S TL
Sbjct: 114 ELHIAEEESKYGFTPAACRELLENGEWKELRNVHISGLMMMASNVDDRSQIRGEMTLAAD 173
Query: 146 RAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ KA A+D E S GMS D++ A+E ST VR+G+ IFGPR Y
Sbjct: 174 LFDELKARFFADDPAFKERSWGMSHDYDIAVECRSTMVRVGTAIFGPRVY 223
>gi|302419101|ref|XP_003007381.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353032|gb|EEY15460.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 260
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 100/191 (52%), Gaps = 19/191 (9%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + LI+ + LP ++WHF+G LQS AK L +PNL V V + K A L+
Sbjct: 67 YAQELIQKVDL-----LPSTLRWHFIGGLQSGHAKKL-AHIPNLFCVSSVDSLKKARLLN 120
Query: 73 KAVSNL-----GRKPLKVLVQVNTSGEESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMT 126
A ++L L V VQVNTSGEE+KSG P + + + CP L GLMT
Sbjct: 121 NARADLLAHGEDVDKLNVHVQVNTSGEEAKSGAAPGDETVALCRAIEDECPALNLLGLMT 180
Query: 127 IGMPDYTSTP------ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTS 180
IG + E+F L R ++ + E + ELSMGMS DFE A+ MGS
Sbjct: 181 IGAIARSKATTAETENEDFLALKEQR-DLVRKELGLERELELSMGMSNDFEGAVAMGSDE 239
Query: 181 VRIGSTIFGPR 191
VRIGSTIFG R
Sbjct: 240 VRIGSTIFGER 250
>gi|241191502|ref|YP_002968896.1| hypothetical protein Balac_1487 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196907|ref|YP_002970462.1| hypothetical protein Balat_1487 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384196063|ref|YP_005581808.1| hypothetical protein BalV_1441 [Bifidobacterium animalis subsp.
lactis V9]
gi|240249894|gb|ACS46834.1| hypothetical protein Balac_1487 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251461|gb|ACS48400.1| hypothetical protein Balat_1487 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794494|gb|ADG34029.1| hypothetical protein BalV_1441 [Bifidobacterium animalis subsp.
lactis V9]
Length = 281
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 27 YNLPEDIK------WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
Y PED+K +H +G LQSNK +L P ++ VE V + ++A + + GR
Sbjct: 110 YAEPEDLKEAPFIPFHLIGQLQSNKISKIL---PTVNTVESVDSLELAEKIARRCMVRGR 166
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPEN 138
+ VL++VN SGEESKSG P L + E + +E GLMT+G + D E
Sbjct: 167 S-MGVLLEVNESGEESKSGCAPDQALELAEQIAA-LGGVELQGLMTVGAHVRDERRIREG 224
Query: 139 FRTLLNCRAEVCKALGM-AEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F L R E ++LGM +C ELSMGMSGD E AI G+T VR+GS IFG R++
Sbjct: 225 FAHLRGLR-ERIQSLGMPGTARCVELSMGMSGDLEYAIAEGATIVRVGSAIFGERDF 280
>gi|260945681|ref|XP_002617138.1| hypothetical protein CLUG_02582 [Clavispora lusitaniae ATCC 42720]
gi|238848992|gb|EEQ38456.1| hypothetical protein CLUG_02582 [Clavispora lusitaniae ATCC 42720]
Length = 268
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+G LQ+ K K L + NL VE + K L+ A + P+ V +Q
Sbjct: 94 LPKDIQWHFIGSLQTGKCKDLAKDIDNLYAVETIDALKKCKKLENARRAVDFAPINVYLQ 153
Query: 89 VNTSGEESKSGIDPSSCLGIVEHV-----RLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
+NTS E+ K+G + I E V + C L+F GLMTIG +++
Sbjct: 154 INTSSEDQKAGYRLENMEEIYETVDFLTNKTECKKLKFEGLMTIGSFAESTSESGLNQDF 213
Query: 144 NCRAEVCKALGMAED-QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
AE+ K L +LSMGMS DF AI GS+SVR+G++IF R
Sbjct: 214 AKLAELKKTLDEKFSLDLQLSMGMSNDFTTAISQGSSSVRVGTSIFEAR 262
>gi|373467136|ref|ZP_09558439.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sp. oral taxon
851 str. F0397]
gi|371759319|gb|EHO48059.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sp. oral taxon
851 str. F0397]
Length = 233
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---SEHFDWMQTLDRAKIAERLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + E F+ + + ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLRLRGLMAIPAPTDKIAKQEAVFKKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D A++ GST VRIG+ IFG R+Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAVKCGSTMVRIGTAIFGARDYSK 233
>gi|307262633|ref|ZP_07544263.1| hypothetical protein appser13_620 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306872056|gb|EFN03770.1| hypothetical protein appser13_620 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 227
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 95/180 (52%), Gaps = 18/180 (10%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L S
Sbjct: 62 KIAYFAQQPNL----EWHFIGPLQSNKTRLV---AENFDWIQTVDRLKIAERLSVQRS-A 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E SKSGI P + + + + PNL GLM I P+ S PE
Sbjct: 114 NKAPLNVLIQINISDEASKSGIQPEELDELAKAIS-QLPNLRLRGLMAIPKPE--SEPEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ L ++ K +D+ E LSMGMS D AIE GST VRIG+ IFG R Y+
Sbjct: 171 QKIALR---KMQKLFDRLQDEFEGIDTLSMGMSDDMAAAIECGSTMVRIGTAIFGTRYYS 227
>gi|313207350|ref|YP_004046527.1| alanine racemase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383484719|ref|YP_005393631.1| alanine racemase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|416110322|ref|ZP_11591937.1| hypothetical protein RAYM_08700 [Riemerella anatipestifer RA-YM]
gi|442315382|ref|YP_007356685.1| putative enzyme with a TIM-barrel fold [Riemerella anatipestifer
RA-CH-2]
gi|312446666|gb|ADQ83021.1| alanine racemase domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315023245|gb|EFT36255.1| hypothetical protein RAYM_08700 [Riemerella anatipestifer RA-YM]
gi|380459404|gb|AFD55088.1| alanine racemase domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441484305|gb|AGC40991.1| putative enzyme with a TIM-barrel fold [Riemerella anatipestifer
RA-CH-2]
Length = 218
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WH +GHLQ+NK K + P + ++ V +EK+ +DK ++ + +L+Q
Sbjct: 58 LPSDIQWHLIGHLQTNKVKYI---APFIHTIQSVDSEKLLQEIDKQAGK-HKRLINILLQ 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
V + E++K+G++ + + ++ PN++ GLM GM +T R +
Sbjct: 114 VKIAEEDTKTGLEVNEVKELCVKIKQGEFPNIKLQGLM--GMATFTDDETQIRREFSFLK 171
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ L + LSMGMSGDF AIE G+ S+R+GS IFG R Y
Sbjct: 172 QLYDYLSDSHQLNTLSMGMSGDFPLAIECGANSIRVGSAIFGARNY 217
>gi|85712848|ref|ZP_01043890.1| Predicted enzyme with a TIM-barrel fold [Idiomarina baltica OS145]
gi|85693312|gb|EAQ31268.1| Predicted enzyme with a TIM-barrel fold [Idiomarina baltica OS145]
Length = 231
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G LQSNK K + + D V+ + EKIA L+ S PL VL+QVN
Sbjct: 77 DITWHFIGPLQSNKTKLV---AEHFDWVQSIDREKIARRLNDQRSG-ALPPLNVLLQVNI 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
+ +KSG+ S + + V +CP+L+ G+MTI D T + + + R E+ +
Sbjct: 133 DNDPNKSGVKKSDINALAKFVS-KCPHLKLRGIMTILEAD-TDEKQQLDSFTSMR-ELYQ 189
Query: 152 ALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
L + LSMGMSGD QAI G+ VRIGS IFG RE
Sbjct: 190 QLQQLHPSVDTLSMGMSGDMRQAIHAGANMVRIGSAIFGQRE 231
>gi|401626718|gb|EJS44643.1| YBL036C [Saccharomyces arboricola H-6]
Length = 257
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 98/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVL 86
LP DIKWHF+G LQ+NK K L VPNL VE V + K A L+++ + P+
Sbjct: 82 LPGDIKWHFIGGLQTNKCKDL-AKVPNLYCVETVDSLKKAKKLNESRAKFQPDCDPISCN 140
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPDYTSTP----ENFR 140
VQ+NTS E+ KSG++ + V L C ++ +GLMTIG D + ++F
Sbjct: 141 VQINTSHEDQKSGLNGEKEIFDVITFFLSDECRYVKLNGLMTIGSWDVSHEDNEENQDFT 200
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+N + ++ G + +LSMGMS DF++AI G++ VRIG+ I G R
Sbjct: 201 TLVNWKQKIDARFGTS---LKLSMGMSADFKEAIRQGTSEVRIGTQILGSR 248
>gi|393785000|ref|ZP_10373156.1| YggS family pyridoxal phosphate enzyme [Bacteroides salyersiae
CL02T12C01]
gi|392663805|gb|EIY57351.1| YggS family pyridoxal phosphate enzyme [Bacteroides salyersiae
CL02T12C01]
Length = 222
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQ+NK K + VP + M+ G+ + K+ ++K +
Sbjct: 47 KVQEMTTKYESLPKDIEWHFIGHLQTNKIKYM---VPYVAMIHGIDSYKLLTEVNKQAAK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
+ R +K L+Q++ + EE+K G C ++ + N++ GLM GM T
Sbjct: 104 VNR-VIKCLIQLHIAQEETKFGFSAEECREMLAAGEWKHLDNVQICGLM--GMASNTDDT 160
Query: 137 ENFRTLLNCRAEVCKALGM-----AEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E ++ K L +++ CELSMGMS D+ QAI GST VR+GS IFG R
Sbjct: 161 EQIDREFCSLNKLFKELKETYFPESDNFCELSMGMSHDYHQAIAEGSTLVRVGSKIFGER 220
Query: 192 EY 193
Y
Sbjct: 221 NY 222
>gi|323334742|gb|EGA76115.1| YBL036C-like protein [Saccharomyces cerevisiae AWRI796]
Length = 231
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVL 86
LP+DIKWHF+G LQ+NK K L VPNL VE + + K A L+++ + P+
Sbjct: 56 LPDDIKWHFIGGLQTNKCKDL-AKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCN 114
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E+ KSG++ + + V L C ++ +GLMTIG + + + EN F
Sbjct: 115 VQINTSREDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFA 174
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+ + ++ G + +LSMGMS DF +AI G+ VRIG+ IFG R
Sbjct: 175 TLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIFGAR 222
>gi|68248701|ref|YP_247813.1| hypothetical protein NTHI0168 [Haemophilus influenzae 86-028NP]
gi|68056900|gb|AAX87153.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 237
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + E FR + + ++
Sbjct: 130 SDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDKIAEQEAVFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+AL + LSMGM+ D AI+ GST VRIG+ IFG R Y+ Q
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARNYSTSQ 235
>gi|407794017|ref|ZP_11141047.1| alanine racemase domain-containing protein [Idiomarina xiamenensis
10-D-4]
gi|407213870|gb|EKE83723.1| alanine racemase domain-containing protein [Idiomarina xiamenensis
10-D-4]
Length = 226
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 19/165 (11%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGRKPLKVLVQVN 90
DI WHF+G +QSNK++ + + D V+ + +KIA L++ S+L PL+VL+QVN
Sbjct: 76 DIVWHFIGPIQSNKSRDV---AEHFDWVQSIDRDKIAKRLNQQRPSHL--PPLQVLIQVN 130
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENF---RTLLNCRA 147
E SKSG+ P +G+ + + C L G+M I P + ++ RTL +
Sbjct: 131 IDDESSKSGVQPEQLIGLAQFIVEHCDRLCLRGIMAI--PSKHADEHSYSAMRTLFS--- 185
Query: 148 EVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
AL DQ + LSMGMS D +QAI G+T VRIGS IFG R
Sbjct: 186 ----ALATQYDQVDTLSMGMSQDLQQAIAGGATMVRIGSAIFGAR 226
>gi|190149320|ref|YP_001967845.1| hypothetical protein APP7_0051 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307244852|ref|ZP_07526951.1| hypothetical protein appser1_660 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253806|ref|ZP_07535660.1| hypothetical protein appser9_660 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258262|ref|ZP_07540005.1| hypothetical protein appser11_670 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|189914451|gb|ACE60703.1| hypothetical protein APP7_0051 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306854297|gb|EFM86503.1| hypothetical protein appser1_660 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863290|gb|EFM95230.1| hypothetical protein appser9_660 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867722|gb|EFM99567.1| hypothetical protein appser11_670 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 227
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 95/180 (52%), Gaps = 18/180 (10%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L S
Sbjct: 62 KIAYFAQQPNL----EWHFIGPLQSNKTRLV---AENFDWIQTVDRLKIAERLSVQRS-A 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E SKSGI P + + + + PNL GLM I P+ S PE
Sbjct: 114 NKAPLNVLIQINISDEASKSGIQPEELDELAKAIS-QLPNLRLRGLMAIPKPE--SEPEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ L ++ L +D+ E LSMGMS D AIE GST VRIG+ IFG R Y+
Sbjct: 171 QKIALRKMQQLFDRL---QDEFEGIDTLSMGMSDDMAAAIECGSTMVRIGTAIFGTRYYS 227
>gi|116621130|ref|YP_823286.1| alanine racemase [Candidatus Solibacter usitatus Ellin6076]
gi|116224292|gb|ABJ83001.1| alanine racemase domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 221
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 15/158 (9%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
++H +GHLQSNK+ ++ V + K+A L+++ GR PL V+++V SG
Sbjct: 76 RFHLIGHLQSNKSSK---AAELFHSIQTVDSAKLARRLNES----GR-PLDVMIEVKLSG 127
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKAL 153
E++KSG+DP+ +++ R CPNL GLMT MP ++ PE R + E+
Sbjct: 128 EDAKSGVDPAQLPDLIQATRA-CPNLNLRGLMT--MPPWSEDPEAPRAIFRTLRELAAEH 184
Query: 154 GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G+ LSMGMS D E AIE GST VR+G+ +FG R
Sbjct: 185 GLPG----LSMGMSNDLETAIEEGSTCVRVGTALFGRR 218
>gi|322513925|ref|ZP_08067002.1| YggS family pyridoxal phosphate enzyme [Actinobacillus ureae ATCC
25976]
gi|322120260|gb|EFX92213.1| YggS family pyridoxal phosphate enzyme [Actinobacillus ureae ATCC
25976]
Length = 231
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 96/179 (53%), Gaps = 12/179 (6%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L+
Sbjct: 62 KIAYFAQQPNL----EWHFIGPLQSNKTRLV---AENFDWIQTVDRLKIAERLNAQCPE- 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E SKSGI P + + + + PNL GLM I P+ S E
Sbjct: 114 NKAPLNVLIQINISDEASKSGIQPEGLDELAKAIS-QLPNLRLRGLMAIPKPE--SEAEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ L+ ++ L + + LSMGMS D + AIE GST VRIG+ IFG R+Y+ K
Sbjct: 171 QKIALHKMQQLFDRLQAEFEGIDTLSMGMSDDIQSAIECGSTMVRIGTAIFGARDYSTK 229
>gi|425747081|ref|ZP_18865099.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-323]
gi|425484241|gb|EKU50650.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-323]
Length = 230
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+GH+Q NK K L D V GV IA L + PL + +QVN
Sbjct: 73 EIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSGQRLE-SQAPLNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+ SK G P +V+++ + PN+ GLM I PD + + L + +V
Sbjct: 129 DGQASKDGCQPEHVAELVQNIS-QLPNIRLRGLMVIPAPDNHAAFAQAKVLFD---QVKS 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+D LSMGMS D E AI GST VR+G+ +FG R+Y+ K
Sbjct: 185 VHAQPQDWDTLSMGMSADLEAAIAAGSTMVRVGTALFGARDYSAK 229
>gi|13473468|ref|NP_105035.1| hypothetical protein mlr4078 [Mesorhizobium loti MAFF303099]
gi|14024217|dbj|BAB50821.1| mlr4078 [Mesorhizobium loti MAFF303099]
Length = 220
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 88/160 (55%), Gaps = 14/160 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKAK V D++E V EKIA L K ++ GR P K+ VQVNT
Sbjct: 75 DIELHLIGPLQSNKAKE---AVALFDVIETVDREKIAAELAKEIARQGRAP-KLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K+GI+P + + V R L GLM I P P LL ++ +
Sbjct: 131 GSEPQKAGIEPRAAIAFVTRCR-DVHGLAIEGLMCI--PPADENPGPHFALLE---KLAR 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G+ + LSMGMSGD+E AI G+TSVR+GS IFG R
Sbjct: 185 EAGVEK----LSMGMSGDYETAIAFGATSVRVGSAIFGSR 220
>gi|255729862|ref|XP_002549856.1| hypothetical protein CTRG_04153 [Candida tropicalis MYA-3404]
gi|240132925|gb|EER32482.1| hypothetical protein CTRG_04153 [Candida tropicalis MYA-3404]
Length = 276
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 9/169 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI WHF+G LQS K K L V NL VE + + K L+ + + + V +Q
Sbjct: 99 LPQDINWHFIGGLQSGKCKDLSKHVKNLYSVETIDSFKKCKQLNNSRDKIDGDVINVYLQ 158
Query: 89 VNTSGEESKSG-IDPSSCLGIVEH-VRLRCPNLEFSGLMTIGM--PDYTSTPEN--FRTL 142
+NTS EE KSG + +E+ + C L+ GLMTIG +S EN F+ L
Sbjct: 159 INTSEEEQKSGFLKIEDIQETIEYLISDECKKLKILGLMTIGSFNESVSSDGENKDFKKL 218
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + + + + +L+MGMS DFEQAI+ GST+VR+G+TIFG R
Sbjct: 219 VEIKKVLDEKYNL---DLQLNMGMSNDFEQAIKQGSTNVRVGTTIFGAR 264
>gi|410081497|ref|XP_003958328.1| hypothetical protein KAFR_0G01590 [Kazachstania africana CBS 2517]
gi|372464916|emb|CCF59193.1| hypothetical protein KAFR_0G01590 [Kazachstania africana CBS 2517]
Length = 249
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL--GRKPLKVL 86
LP DIKWHF+G LQ+NK K L V NL +E + + K A L++A P+
Sbjct: 74 LPNDIKWHFIGGLQTNKCKDL-AKVANLYCIETIDSLKKAKKLNEARGKYQPNADPIMCN 132
Query: 87 VQVNTSGEESKSGID-PSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP----ENFR 140
VQ+NTS EE KSG+ ++E + ++ +GLMTIG + + E+F
Sbjct: 133 VQINTSHEEQKSGLSKEDEIFQVIEFFQSEEAKYVKLNGLMTIGSWEVSHNESEENEDFT 192
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL+N + +V G LSMGMS D++QAI+ GS+ VR+G+ IFG R
Sbjct: 193 TLVNWKEKVDTKFGT---NLNLSMGMSSDYKQAIKQGSSEVRVGTDIFGTR 240
>gi|229845488|ref|ZP_04465617.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
6P18H1]
gi|89892365|gb|ABD78959.1| HI0090-like protein [Haemophilus influenzae]
gi|229811591|gb|EEP47291.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
6P18H1]
Length = 233
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRTLLNCRAEV 149
S EESKSG+ P L + +H+ P+L GLM I P + FR + + ++
Sbjct: 130 SDEESKSGLQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTNKIAEQEAVFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+AL + LSMGM+ D AI+ GST VRIG+ IFG R Y+K
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKYGSTMVRIGTAIFGARNYSK 233
>gi|427426280|ref|ZP_18916341.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-136]
gi|425696912|gb|EKU66607.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-136]
Length = 230
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQSALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEEVAELVAQIS-QLPKIKLRGLMVIPAPDNTAAFADAKALFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D + AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHTHPEDWDTLSMGMSSDLDAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|445435652|ref|ZP_21440372.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC021]
gi|444755402|gb|ELW79986.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC021]
Length = 230
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L ++ + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGDI-QAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+++K G P +V + + P ++ GLM I PD T+ + + L + EV +
Sbjct: 129 DGQDTKDGCAPEEVAELVAQIS-QLPKIKLRGLMVIPAPDNTAAFADAKKLFD---EVKE 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
A+D LSMGMSGD + AI GST VR+G+ +FG R+
Sbjct: 185 QHAHAQDWDTLSMGMSGDLDAAIAAGSTMVRVGTALFGKRD 225
>gi|423215807|ref|ZP_17202333.1| YggS family pyridoxal phosphate enzyme [Bacteroides xylanisolvens
CL03T12C04]
gi|392691450|gb|EIY84695.1| YggS family pyridoxal phosphate enzyme [Bacteroides xylanisolvens
CL03T12C04]
Length = 222
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 27/189 (14%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQ+NK K + +P + M+ G+ + K+ ++K
Sbjct: 47 KVQEMTAKYESLPKDIEWHFIGHLQTNKIKYM---IPYVAMIHGIDSYKLLAEVNKQAVK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSC---LGIVE-----HVRLRCPNLEFSGLMTIGM 129
GR + L+Q++ + EE+K G P C L + E HVR+R GLM GM
Sbjct: 104 AGR-TVNCLLQIHVAQEETKFGFSPEECKEMLNVGEWKELTHVRIR-------GLM--GM 153
Query: 130 PDYTSTPEN----FRTLLNCRAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIG 184
T E F +L E+ D CELSMGMS D+ +AI GST VR+G
Sbjct: 154 ASNTDCIEQINREFCSLNRLFNEIKTTWFTHSDTFCELSMGMSHDYHEAIAAGSTLVRVG 213
Query: 185 STIFGPREY 193
S IFG R Y
Sbjct: 214 SKIFGERNY 222
>gi|448511809|ref|XP_003866619.1| racemase [Candida orthopsilosis Co 90-125]
gi|380350957|emb|CCG21180.1| racemase [Candida orthopsilosis Co 90-125]
Length = 291
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 95/169 (56%), Gaps = 9/169 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI WHF+G LQS K K L V NL VE V K L+ A + + V +Q
Sbjct: 120 LPKDICWHFIGGLQSGKCKDLSNRVTNLWAVETVDTLKKCRQLNNARERKEGEIINVYLQ 179
Query: 89 VNTSGEESKSG-IDPSSCLGIVEHVRL-RCPNLEFSGLMTIG-MPDYTSTPE---NFRTL 142
VNTSGEE KSG ++ +++++ C L GLMTIG + + S E +F+ L
Sbjct: 180 VNTSGEEQKSGFLEMGDLEETIKYIQSDECKKLNLIGLMTIGSIAESKSDHEENNDFKKL 239
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + + K + ELSMGMS DFEQAI GS+ VR+GS+IFG R
Sbjct: 240 VEWKKILDKKYQL---DLELSMGMSNDFEQAIRQGSSCVRVGSSIFGAR 285
>gi|373495384|ref|ZP_09585969.1| YggS family pyridoxal phosphate enzyme [Eubacterium infirmum F0142]
gi|371964862|gb|EHO82366.1| YggS family pyridoxal phosphate enzyme [Eubacterium infirmum F0142]
Length = 234
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ ++KY D +WH +GHLQ+NK K ++ V M+ V + K+A ++K +
Sbjct: 57 KVQEILNKYEAVGDARWHLIGHLQTNKVKYIVDKVA---MIHSVDSLKLAKEINKRSEAI 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTP 136
GR + +L+QVN++ EESK GI +++ + C + GLM I D
Sbjct: 114 GR-TMDILIQVNSAEEESKFGIKSEEVDSLIDDIVNECKYVRIKGLMCIAPFEEDVNDCR 172
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
F + + A D LSMGMSGDFE AIE GS VR+G+ IFG R Y ++
Sbjct: 173 PYFAEVKDIFDRYKSDERDAVDFEFLSMGMSGDFEVAIEEGSNMVRVGTAIFGARNYRQE 232
Query: 197 QQ 198
++
Sbjct: 233 EK 234
>gi|110635537|ref|YP_675745.1| hypothetical protein Meso_3208 [Chelativorans sp. BNC1]
gi|110286521|gb|ABG64580.1| Protein of unknown function UPF0001 [Chelativorans sp. BNC1]
Length = 225
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKAK V D++E V EKIA L + GR+ L++ VQVNT
Sbjct: 75 DIELHLIGPLQSNKAKE---AVALFDVIETVDREKIAAALAAEMEKQGRR-LRLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K+GIDP V R LE GLM I P P LL ++ +
Sbjct: 131 GLEPQKAGIDPRETAAFVARCR-EVHGLEIEGLMCI--PPLDENPGPHFALLE---KLAR 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
G+ + LSMGMSGDFE AI G+TS+R+GS IFG R Y+
Sbjct: 185 EAGVEK----LSMGMSGDFETAIAFGATSIRVGSAIFGSRAYS 223
>gi|60682296|ref|YP_212440.1| racemase [Bacteroides fragilis NCTC 9343]
gi|60493730|emb|CAH08519.1| putative racemase [Bacteroides fragilis NCTC 9343]
Length = 222
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+ G+ + K+ ++K K ++ L+
Sbjct: 57 SLPKDIEWHFIGHLQTNKIKYM---APYVSMIHGIDSYKLLAEVNKQAIK-AEKVIRCLL 112
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPEN----FRTL 142
Q++ + EE+K G C ++ + N++ GLM GM T + E FR+L
Sbjct: 113 QIHIAQEETKFGFSFDECKEMLNAAEWKALANIQICGLM--GMATNTDSKEQIEREFRSL 170
Query: 143 LNCRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
NC K A + CELSMGMS D+ AI+ GST VR+GS IFG R Y
Sbjct: 171 -NCFFHEVKKQYFANEPTFCELSMGMSHDYHLAIKEGSTLVRVGSKIFGERVY 222
>gi|332283446|ref|YP_004415357.1| hypothetical protein PT7_0193 [Pusillimonas sp. T7-7]
gi|330427399|gb|AEC18733.1| hypothetical protein PT7_0193 [Pusillimonas sp. T7-7]
Length = 250
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 89/167 (53%), Gaps = 12/167 (7%)
Query: 32 DIKWHFVGHLQSNKAKT---LLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
DI W +GHLQ+NKAK + + +LD ++ +A LD+ + GR + LVQ
Sbjct: 76 DIDWVMIGHLQTNKAKDVARMASEIQSLDRMD------LAIALDRRLQQEGR-AIDALVQ 128
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCR 146
V TS E SK G+ P G + V P L GLMT+ + D + FRTL R
Sbjct: 129 VKTSSEPSKYGLPPEELPGFLRQVARDIPTLRIKGLMTLAINAADDAAVRACFRTLRELR 188
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ + + LSMGMSGDFE AIE GST VRIG+ IFG R Y
Sbjct: 189 DQMRQEDIAGIELDRLSMGMSGDFEIAIEEGSTEVRIGTAIFGGRIY 235
>gi|340623082|ref|YP_004741534.1| hypothetical protein Ccan_23120 [Capnocytophaga canimorsus Cc5]
gi|339903348|gb|AEK24427.1| UPF0001 protein [Capnocytophaga canimorsus Cc5]
Length = 241
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Query: 25 DKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP 82
+KY +D++ HF+GHLQ+NK K +L ++ V+ + +A + + + N R
Sbjct: 63 EKYEALKDVQHTNHFIGHLQTNKIKEILR--YDVSCVQSLDRYDLAEKMHQRLQNQNR-T 119
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFR 140
L VL+QVNTS EESK G+ P + +V+ V + L+ GLMTIG+ D + FR
Sbjct: 120 LDVLIQVNTSNEESKFGVQPEGVVDLVKKV-AQLNTLKIKGLMTIGLFSDDAEKVRKCFR 178
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
L + + ++ ELSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 179 LLKDIQLQIKDLQIENVAMTELSMGMSGDLEIAIEEGATIVRVGTDIFGKRLY 231
>gi|150390564|ref|YP_001320613.1| alanine racemase domain-containing protein [Alkaliphilus
metalliredigens QYMF]
gi|149950426|gb|ABR48954.1| alanine racemase domain protein [Alkaliphilus metalliredigens QYMF]
Length = 231
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY L +KWH +GHLQ NK K ++ V D + + + +A ++K
Sbjct: 57 KVQELTRKYEALGNKVKWHMIGHLQRNKVKYIIDKV---DFIHSLDSYALALEIEKQAGK 113
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+ R ++ L+QVN SGEESK G+ P + G++E ++ +++ GLMT M Y PE
Sbjct: 114 INR-VIECLIQVNISGEESKYGLTPKATEGLLEKIK-DLSHVQIVGLMT--MAPYVDNPE 169
Query: 138 N----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
FR L + + K G LSMGM+ DF+ AIE GS VR+G+ I G R Y
Sbjct: 170 ETRMYFRDLKILSSTLEKKYGPTATMKYLSMGMTNDFQIAIEEGSNLVRVGTAILGERNY 229
Query: 194 AK 195
K
Sbjct: 230 GK 231
>gi|210622347|ref|ZP_03293116.1| hypothetical protein CLOHIR_01064 [Clostridium hiranonis DSM 13275]
gi|210154335|gb|EEA85341.1| hypothetical protein CLOHIR_01064 [Clostridium hiranonis DSM 13275]
Length = 233
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 8/170 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
L + I+WH +G LQ+NK K ++ V M+ + E +A +DK + +GR + LVQ
Sbjct: 69 LGDKIRWHQIGSLQTNKVKYIIDKVC---MIHSLDREGLAEEIDKRANKIGR-VIDCLVQ 124
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP--ENFRTLLNCR 146
VN SGEESK G+ V V + PN++ GLMT+ D + FR L
Sbjct: 125 VNISGEESKHGMSREEVEPFVRLVAEKYPNIKIKGLMTMAPFDAERDEIRKVFRDLKELS 184
Query: 147 AEVCKA-LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+ +G E ELSMGM+ DFE A+E G+T VR+G+ IFG R Y K
Sbjct: 185 DEINNMNIGNVE-MNELSMGMTNDFEIAVEEGATMVRVGTAIFGKRNYNK 233
>gi|337265723|ref|YP_004609778.1| alanine racemase domain-containing protein [Mesorhizobium
opportunistum WSM2075]
gi|336026033|gb|AEH85684.1| alanine racemase domain protein [Mesorhizobium opportunistum
WSM2075]
Length = 220
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKA+ V D++E V EKIA L + ++ GR P K+ VQVNT
Sbjct: 75 DIELHLIGPLQSNKARE---AVALFDVIETVDREKIAAELAREIARQGRAP-KLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K+GI+P + V R L GLM I D P +F L +
Sbjct: 131 GSEPQKAGIEPREAVAFVARCR-DVHGLAIEGLMCIPPADENPGP-HFALL--------E 180
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
LG +LSMGMSGD+E AI G+TSVR+GS IFG R
Sbjct: 181 KLGKEAGVAKLSMGMSGDYETAIAFGATSVRVGSAIFGSR 220
>gi|406040594|ref|ZP_11047949.1| hypothetical protein AursD1_12418 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 228
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + PL + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKQL---AEKFDWVHGVDRLIIAERLSSQRLD-TQSPLNLCIQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
++SK G P +V + + P++ G+M I PD++ + + L + +V
Sbjct: 129 DAQDSKDGCQPDEVAELVAQIS-QLPHIRLRGIMVIPAPDHSQAFIDAKELFD---QVRL 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+D LSMGMSGD + AI G+T VRIG+ +FG R+Y+K
Sbjct: 185 QHAQPQDWDTLSMGMSGDLDAAIAAGATIVRIGTALFGARDYSK 228
>gi|307260503|ref|ZP_07542197.1| hypothetical protein appser12_780 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869815|gb|EFN01598.1| hypothetical protein appser12_780 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 227
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 95/180 (52%), Gaps = 18/180 (10%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L A +
Sbjct: 62 KIAYFAQQPNL----EWHFIGALQSNKTRLV---AENFDWIQTVDRLKIAERL-SAQRSA 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E KSGI P + + + + PNL GLM I P+ S PE
Sbjct: 114 NKAPLNVLIQINISDEAYKSGIQPEELDELAKAIS-QLPNLRLRGLMAIPKPE--SEPEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ L ++ L +D+ E LSMGMS D AIE GST VRIG+ IFG R Y+
Sbjct: 171 QKIALRKMRQLFDRL---QDEFEGIDTLSMGMSDDMAAAIECGSTMVRIGTAIFGTRYYS 227
>gi|291546182|emb|CBL19290.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus sp. SR1/5]
Length = 230
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 10/180 (5%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +DKY+ +P D+KWH +GHLQ NK K ++ V M+ V + ++A ++K +
Sbjct: 56 KVQEIVDKYDQMPSDVKWHMIGHLQRNKVKYIVDKVA---MIHSVDSLRLAETIEKEAAK 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+ +L++VN + EESK G+ P L ++E + ++ GLMTI P + E
Sbjct: 113 KAV-IVPILIEVNVAQEESKFGLKPEEVLPLIEQI-ADFSHIRIKGLMTIA-PYVDNAEE 169
Query: 138 N---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
N FR L ++ LSMGM+GD+ A++ G+T VR+G+ IFG R YA
Sbjct: 170 NREIFRELKKLSVDIAAKNINNVTMSVLSMGMTGDYMVAVQEGATMVRVGTGIFGARNYA 229
>gi|256425067|ref|YP_003125720.1| alanine racemase [Chitinophaga pinensis DSM 2588]
gi|256039975|gb|ACU63519.1| alanine racemase domain protein [Chitinophaga pinensis DSM 2588]
Length = 244
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 13/187 (6%)
Query: 19 KLLRFIDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ F DK+ D ++ HF+GHLQ NK K +L V V+ + IA LDK +
Sbjct: 59 KVQEFRDKHEALSDLSVERHFIGHLQHNKVKDVLKYVS---CVQSLDRLSIAQELDKRLQ 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
GR L V +QVNTS EESK G+ P+ G + ++ L+ GLMTIG+ D
Sbjct: 116 QEGRN-LDVFIQVNTSYEESKFGLQPADVAGFIRELK-SLDTLQVKGLMTIGLLDVDR-- 171
Query: 137 ENFR---TLLNCRAEVCKALGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
E R TLL E A G+ DQ +LSMGMS D + AI G+ VR+G+ IFG R
Sbjct: 172 EKMRPSLTLLRQTREQLIAAGIENSDQFKLSMGMSQDLDMAIAEGADIVRVGTAIFGNRV 231
Query: 193 YAKKQQN 199
K+ N
Sbjct: 232 IGKEIWN 238
>gi|223936777|ref|ZP_03628687.1| alanine racemase domain protein [bacterium Ellin514]
gi|223894628|gb|EEF61079.1| alanine racemase domain protein [bacterium Ellin514]
Length = 241
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 23/176 (13%)
Query: 30 PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
P +++WH +GHLQSNK + V M++ V + +A +DK ++ K + +L++V
Sbjct: 69 PANLRWHMIGHLQSNKCRD---AVHFFQMIQSVDSLALAQEIDK-WADKSAKTMPILLEV 124
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
N +GE SK G P L + + +E GLMTI +T PE R +
Sbjct: 125 NIAGESSKFGYRPDQLLSELLQINA-LHKIEIHGLMTIA--PWTPEPEKVRPIF------ 175
Query: 150 CKALGMAEDQCE---------LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ L + +++CE LSMGMSGDFE AIE G+T VRIG+ +FGPR A K
Sbjct: 176 -QKLRLLKEECEKILGAPLPHLSMGMSGDFEIAIEEGATIVRIGTALFGPRARATK 230
>gi|312131524|ref|YP_003998864.1| alanine racemase [Leadbetterella byssophila DSM 17132]
gi|311908070|gb|ADQ18511.1| alanine racemase domain protein [Leadbetterella byssophila DSM
17132]
Length = 217
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+D++WHF+GHLQ+NK K + P + ++ V + K+ + K ++ GR + VL+Q
Sbjct: 58 LPKDVRWHFIGHLQTNKVKYI---APFVHLIHSVDSLKLLKEIQKQGASKGR-IISVLLQ 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
+ + EESK+G D I++ L+ PN++ GLM GM +T + R A
Sbjct: 114 AHIAEEESKTGFDIEELKEILQSGTLQTFPNVKVEGLM--GMGTFTEDADQTRREFKHMA 171
Query: 148 EVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ + E + LSMGMSGD++ A+E GS VRIGSTIFG R
Sbjct: 172 EIFEEAKQYEPGLKILSMGMSGDWKIAVEEGSNMVRIGSTIFGSR 216
>gi|293609002|ref|ZP_06691305.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829575|gb|EFF87937.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 230
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K + D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHV---AEKFDWVHGVDRLIIAERLSNQRGD-DQSALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P ++ GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQIS-QLPKIKLRGLMVIPAPDNTAAFADAKALFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+D LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPQDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|90412040|ref|ZP_01220047.1| Predicted enzyme with a TIM-barrel fold [Photobacterium profundum
3TCK]
gi|90327018|gb|EAS43397.1| Predicted enzyme with a TIM-barrel fold [Photobacterium profundum
3TCK]
Length = 233
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 8/182 (4%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++ + E+I WHF+G +QSNK + + + D V V K A L+
Sbjct: 58 YVQEGVEKVQHFANHAQTEEIFWHFIGPIQSNKTRPI---AEHFDWVHSVDRIKTARRLN 114
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY 132
+ + PL +L+QVNTSGEESKSG++ + + + + PNL GLM+I P
Sbjct: 115 EQRPS-SMAPLNILLQVNTSGEESKSGVNINDLAALADEI-ATMPNLVLRGLMSI--PQK 170
Query: 133 TSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ ++ A+ + L + Q + LSMGMSGD + AI GST VRIG+ IFG R
Sbjct: 171 ADSYDSQYAAFKLLADAQQQLHIKYPQIDTLSMGMSGDMDAAIAAGSTIVRIGTAIFGAR 230
Query: 192 EY 193
+Y
Sbjct: 231 DY 232
>gi|423014492|ref|ZP_17005213.1| alanine racemase, N-terminal domain-containing protein 3
[Achromobacter xylosoxidans AXX-A]
gi|338782495|gb|EGP46868.1| alanine racemase, N-terminal domain-containing protein 3
[Achromobacter xylosoxidans AXX-A]
Length = 239
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 87/168 (51%), Gaps = 8/168 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +GHLQ+NKAK L ++ + +A L + + N GR L VLVQV TS
Sbjct: 77 LQWVLIGHLQTNKAKDAARDATELQSLDRL---DLAEALHRRLVNEGRT-LDVLVQVKTS 132
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E SK G+ P + V P L GLMT+ PD FR L R +
Sbjct: 133 SEPSKYGMAPDDVAAFLRRVTADFPTLRVQGLMTMAANSPDPLEVRACFRGLRELR-DRL 191
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ G+A E LSMGMSGDFE AIE GST VRIG+ IFG R Y Q
Sbjct: 192 RQEGIAGVSLERLSMGMSGDFELAIEEGSTEVRIGTAIFGARSYPDPQ 239
>gi|145639591|ref|ZP_01795195.1| hypothetical protein CGSHiII_10128 [Haemophilus influenzae PittII]
gi|145271382|gb|EDK11295.1| hypothetical protein CGSHiII_10128 [Haemophilus influenzae PittII]
gi|309750493|gb|ADO80477.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 237
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA+ L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSGI P L + +H+ P+L GLM I P D + E FR + + ++
Sbjct: 130 SDEESKSGIQPGEMLTLAKHIE-NLPHLCLRGLMAIPAPTDNIAEQEAVFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+AL + LSMGM+ D AI+ GST VRIG+ IFG R Y+ Q
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARNYSTSQ 235
>gi|192291510|ref|YP_001992115.1| alanine racemase domain-containing protein [Rhodopseudomonas
palustris TIE-1]
gi|192285259|gb|ACF01640.1| alanine racemase domain protein [Rhodopseudomonas palustris TIE-1]
Length = 262
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 16/179 (8%)
Query: 19 KLLRFIDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
KL DK ++ D I+W +GHLQ+NK K L+ ++ + ++A+ L++ +
Sbjct: 77 KLQEARDKRDILADLPIRWSIIGHLQTNKVKYLVRFAAEFHALDSL---RLADELNRRLD 133
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
GR L V VQVNTSGE SK G+ P + +E + P L+ GLMT+ + +++
Sbjct: 134 AEGRD-LDVFVQVNTSGEASKYGLAPCDLVPFIERLS-DYPRLKPRGLMTLAI--FSAET 189
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E FR L + R +A+ + D ELSMGMSGDFE AIE G+T VR+G IFG R
Sbjct: 190 ERVRGCFRLLRDLRD---RAIRVHPDLTELSMGMSGDFEFAIEEGATVVRVGQAIFGAR 245
>gi|383789984|ref|YP_005474558.1| pyridoxal phosphate enzyme, YggS family [Spirochaeta africana DSM
8902]
gi|383106518|gb|AFG36851.1| pyridoxal phosphate enzyme, YggS family [Spirochaeta africana DSM
8902]
Length = 254
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 93/177 (52%), Gaps = 15/177 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGV--------PNLDMVEGVGNEKIANHLDKAVSNLG 79
+ P ++ HF+GHLQSNK K +LG P+L E++A + G
Sbjct: 79 DAPHPVEQHFIGHLQSNKIKDMLGFAAMLHSLDRPSLARKLQSALERLAADRPSGAPSAG 138
Query: 80 RKPLK--VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTST 135
+ PL VLVQVNTS E+SK G P +V+ V P L+ G MTIG+ D +
Sbjct: 139 QPPLPFPVLVQVNTSEEDSKFGCHPEDAAALVDLVE-SLPLLDLQGFMTIGLFSDDEEAV 197
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
FR L R + LG ELSMGMSGDFE AI G+T VR+GS++FG R+
Sbjct: 198 RRGFRHLREIRDTAEQRLG--RRLPELSMGMSGDFELAIAEGATIVRLGSSVFGRRQ 252
>gi|409203619|ref|ZP_11231822.1| PLP-binding domain-containing protein [Pseudoalteromonas
flavipulchra JG1]
Length = 227
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 16/165 (9%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGRKPLKVLVQVNT 91
++WHF+G +QSNK++ + N V+ V EKIA L++ +NL KPLKVL+QVN
Sbjct: 74 LEWHFIGPIQSNKSRLV---AENFHWVQSVDREKIARRLNEQRPTNL--KPLKVLLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SG+++KSG P+ + + + C LE GLMTI T ++ + L ++
Sbjct: 129 SGDDNKSGCHPNEVDTLAQFIN-DCRQLELRGLMTI-----TEQTDDKQKQLQYFQQMRA 182
Query: 152 ALGMAEDQCE----LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+DQ + LSMGMSGD + AI GST VRIG+ IFG R+
Sbjct: 183 CFDRLKDQYQQLDTLSMGMSGDLDTAIAAGSTMVRIGTDIFGKRQ 227
>gi|433772598|ref|YP_007303065.1| pyridoxal phosphate enzyme, YggS family [Mesorhizobium australicum
WSM2073]
gi|433664613|gb|AGB43689.1| pyridoxal phosphate enzyme, YggS family [Mesorhizobium australicum
WSM2073]
Length = 220
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKA+ V +++E V +KIA L K + GR P K+ VQVNT
Sbjct: 75 DIELHLIGPLQSNKARE---AVALFEVIETVDRDKIAAELAKEIVRQGRAP-KLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K+GI+PS + V R L GLM I D P +F L +
Sbjct: 131 GSEPQKAGIEPSEAVAFVRRCR-EVHGLGIEGLMCIPPADENPGP-HFALL--------E 180
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
LG +LSMGMSGDFE AI G+TSVR+GS IFG R
Sbjct: 181 KLGKEAGVAKLSMGMSGDFETAIAFGATSVRVGSAIFGSR 220
>gi|149928122|ref|ZP_01916369.1| hypothetical protein LMED105_15274 [Limnobacter sp. MED105]
gi|149823208|gb|EDM82445.1| hypothetical protein LMED105_15274 [Limnobacter sp. MED105]
Length = 237
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 17/189 (8%)
Query: 14 KKSLIKLLRFIDKYN---LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANH 70
+++L K+ + D N + +++WHF+G +QSNK K + N V V KIA
Sbjct: 59 QEALDKITQLADHPNAQTINTNLEWHFIGPIQSNKTKPI---AENFSWVHSVDRLKIAQR 115
Query: 71 L-DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM 129
L D+ LG PL VLVQ+NTSGE+SKSG++ + ++ N+ GLMTI
Sbjct: 116 LSDQRPDKLG--PLNVLVQINTSGEDSKSGVNAEQTADLCLQIQ-SLKNIALRGLMTI-- 170
Query: 130 PDYTSTPENFRT-LLNCRA--EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGST 186
P T + + L C+ + + G+ D LSMGMS D E AIE GS+ VR+GS
Sbjct: 171 PSNTDNVDQLKAEFLKCKLIFDSLNSKGLRMD--TLSMGMSADLELAIECGSSCVRVGSA 228
Query: 187 IFGPREYAK 195
+FG R Y+K
Sbjct: 229 LFGARNYSK 237
>gi|386341979|ref|YP_006038345.1| hypothetical protein [Shewanella baltica OS117]
gi|334864380|gb|AEH14851.1| protein of unknown function UPF0001 [Shewanella baltica OS117]
Length = 239
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 93/174 (53%), Gaps = 17/174 (9%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLK 84
K + P DI+WHF+G LQSNK + + D + V +KIA L D+ + L PL
Sbjct: 77 KEDFP-DIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIAQRLNDQRPAELA--PLN 130
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFR 140
V +Q+N S E++KSGID + L + E + + PNL GLM I P T+ E F
Sbjct: 131 VCIQINISAEDTKSGIDAAQMLPLAELI-AQLPNLALRGLMAI--PTATADTELQLKEFS 187
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L N E+ + LSMGMS D + AI GST VRIGS IFG R YA
Sbjct: 188 MLNNLFQELKSHYPSVD---TLSMGMSNDLDAAISCGSTMVRIGSAIFGERNYA 238
>gi|406928430|gb|EKD64235.1| Pyridoxal phosphate enzyme, YggS family [uncultured bacterium]
Length = 211
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 15/163 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+ IK H +GHLQ NKAK V D++E V +EK+A+ +DK +G+K +++ +Q
Sbjct: 59 LPKHIKKHLIGHLQKNKAK---DAVALFDLIESVDSEKLAHEIDKQARKIGKK-MQIYIQ 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCR 146
VN S E KSGI + +++ + PNLE G M I PD + F ++ +
Sbjct: 115 VNISREHQKSGILEENLDNLIKVINT-LPNLELKGFMAIAEDTPDEKKLEKQFASMHRLK 173
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
+ + ELS+GMS D+++AI+ GST VR+GS IF
Sbjct: 174 NKY--------NLPELSIGMSQDYKEAIKHGSTEVRLGSVIFA 208
>gi|417931782|ref|ZP_12575147.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK182B-JCVI]
gi|340775725|gb|EGR97778.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK182B-JCVI]
Length = 238
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + K+A+ LDK + GR+ L+VLVQVN+S
Sbjct: 75 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KVAHELDKRLHKEGRQ-LRVLVQVNSS 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + C L+ GLMT+ D + F ++ R ++
Sbjct: 131 AEPQKSGIAPDEAVDFARELAA-CDALDVRGLMTVARNSSDQRVVADCFDLVVATREKLR 189
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 190 QEAGDISDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAR 234
>gi|429768482|ref|ZP_19300637.1| pyridoxal phosphate enzyme, YggS family [Brevundimonas diminuta
470-4]
gi|429189109|gb|EKY29957.1| pyridoxal phosphate enzyme, YggS family [Brevundimonas diminuta
470-4]
Length = 261
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 12/162 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+WH VGHLQSNK K L D + + K+A+ L++ + GR + V VQVNTS
Sbjct: 96 IRWHIVGHLQSNKVKYLTRLA---DEFHALDSLKLADILNRRLETDGRD-MNVYVQVNTS 151
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR---TLLNCRAEV 149
GE+SK G+ P L +E + P L+ GLMT+ + ++ P R TLL R
Sbjct: 152 GEQSKFGLHPDDALDFIERLEA-FPRLKPQGLMTLAV--FSDDPARVRPCFTLL--RRLR 206
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+A + LSMGMSGD+E A+ G+T VR+G IFGPR
Sbjct: 207 DQAQRLHPRMSGLSMGMSGDYELAVREGATVVRVGQAIFGPR 248
>gi|389580186|ref|ZP_10170213.1| pyridoxal phosphate enzyme, YggS family [Desulfobacter postgatei
2ac9]
gi|389401821|gb|EIM64043.1| pyridoxal phosphate enzyme, YggS family [Desulfobacter postgatei
2ac9]
Length = 229
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+GHLQSNKAK V D++ V K+A +++ +G K K+L+QVN S E
Sbjct: 75 WHFIGHLQSNKAKF---AVKYFDLIHTVDTVKLAQEINRQAQKIG-KIQKILLQVNISRE 130
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALG 154
+KSG S + I + R NL SGLM MP + PE+ R ++ K +
Sbjct: 131 ATKSGAQESEVVDIAKQT-CRFDNLHVSGLMC--MPPFFDDPEDARIYFKRLKQISKEIE 187
Query: 155 MAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
LSMGMS DF A+E G+T VR+G+ IFG R+
Sbjct: 188 RLNLPNTAMTHLSMGMSNDFTVAVEEGATLVRVGTAIFGARQ 229
>gi|225572134|ref|ZP_03780998.1| hypothetical protein RUMHYD_00428 [Blautia hydrogenotrophica DSM
10507]
gi|225040400|gb|EEG50646.1| pyridoxal phosphate enzyme, YggS family [Blautia hydrogenotrophica
DSM 10507]
Length = 244
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY+ LP+DI WH +GHLQ NK K ++ V M+ V + ++A +DK
Sbjct: 70 KVQEITAKYDQLPQDIHWHMIGHLQRNKVKYIVDKVK---MIHSVDSLRLAETIDKEAQK 126
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+ VL++VN + E+SK G+ + ++E V + PN+ GLMT+ + PE
Sbjct: 127 -KNVVVPVLIEVNVAEEDSKFGLSLEEVVSLIEAVS-KLPNVRVQGLMTVA--PFVENPE 182
Query: 138 N----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
FR+L ++ LSMGM+ D+E AIE G+T VR+G+ IFG R+Y
Sbjct: 183 ENREIFRSLKKLSVDITAKNINNVTMSVLSMGMTNDYEVAIEEGATMVRVGTGIFGARDY 242
Query: 194 AK 195
++
Sbjct: 243 SR 244
>gi|421651365|ref|ZP_16091734.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC0162]
gi|425747876|ref|ZP_18865874.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-348]
gi|445456540|ref|ZP_21445915.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC047]
gi|408507975|gb|EKK09662.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC0162]
gi|425492915|gb|EKU59167.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-348]
gi|444777799|gb|ELX01820.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC047]
Length = 230
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P ++ GLM I PD T + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIKLRGLMVIPAPDNTGAFADAKKLFDA---VKV 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
ED LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|423283806|ref|ZP_17262690.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
615]
gi|404580352|gb|EKA85061.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
615]
Length = 222
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+ G+ + K+ ++K R ++ L+
Sbjct: 57 SLPKDIEWHFIGHLQTNKIKYM---APYVSMIHGIDSYKLLAEVNKQAIKAER-VIRCLL 112
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPEN----FRTL 142
Q++ + EE+K G C ++ + N++ GLM GM T++ E FR+L
Sbjct: 113 QIHIAQEETKFGFSFDECKEMLNAAEWKALANIQICGLM--GMATNTNSKEQIEREFRSL 170
Query: 143 LNCRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
NC K A + CELSMGMS D+ AI+ GST VR+GS IFG R Y
Sbjct: 171 -NCFFHEVKKQYFANEPTFCELSMGMSHDYHLAIKEGSTLVRVGSKIFGERVY 222
>gi|220931765|ref|YP_002508673.1| hypothetical protein Hore_09220 [Halothermothrix orenii H 168]
gi|219993075|gb|ACL69678.1| conserved hypothetical protein TIGR00044 [Halothermothrix orenii H
168]
Length = 230
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 14/166 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+GHLQ NK K L+ + N ++ + + ++A +DK RK + VLVQVN +
Sbjct: 73 VEWHFIGHLQRNKVKYLMR-MENCTLIHSLDSWRLARTIDKRARKNNRK-IPVLVQVNVA 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAE 148
+ +K GI+PS V V + N+ GLMTI +P Y+ PE F+ + N +
Sbjct: 131 RDPNKFGIEPSEVKDFVYEVS-KLENIRVEGLMTI-VP-YSENPEEARPYFKQMNNLKNM 187
Query: 149 VC-KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+C K + E LSMGMS DFE AIE G+T +RIG+ +FG R Y
Sbjct: 188 LCDKGFNVKE----LSMGMSNDFEVAIEEGATIIRIGTKLFGERVY 229
>gi|407452943|ref|YP_006724668.1| hypothetical protein B739_2186 [Riemerella anatipestifer RA-CH-1]
gi|403313927|gb|AFR36768.1| putative enzyme with a TIM-barrel fold [Riemerella anatipestifer
RA-CH-1]
Length = 218
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WH +GHLQ+NK K + P + ++ V +EK+ +DK ++ + +L+Q
Sbjct: 58 LPSDIQWHLIGHLQTNKVKYI---APFVHTIQSVDSEKLLQEIDKQAGK-HKRLINILLQ 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
V + E++K+G++ + + ++ PN++ GLM GM +T R +
Sbjct: 114 VKIAEEDTKTGLEVNEVKELCVKIKQGEFPNIKLQGLM--GMATFTDDETQIRREFSFLK 171
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ L + LSMGMSGDF AIE G+ S+R+GS IFG R Y
Sbjct: 172 RLYDYLSDSHQLNTLSMGMSGDFPLAIECGANSIRVGSAIFGARNY 217
>gi|118581657|ref|YP_902907.1| alanine racemase domain-containing protein [Pelobacter propionicus
DSM 2379]
gi|118504367|gb|ABL00850.1| alanine racemase domain protein [Pelobacter propionicus DSM 2379]
Length = 228
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 16/188 (8%)
Query: 10 KITYKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIAN 69
+I + ++ ++ LR + + ++WHF+GHLQSNK + + G V M+ V +A
Sbjct: 50 QIIFGENYVQELR-AKAPEVKKSVEWHFIGHLQSNKVRQIAGLV---SMIHSVDRLSLAE 105
Query: 70 HLDKAVSNLGRKPLK--VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI 127
+ + GR L +LVQVN SGE +KSG + L +V + + PNL GLMT
Sbjct: 106 EISR---QWGRLSLSCDILVQVNISGEITKSGTTAENALQLVRDIAV-LPNLRIRGLMT- 160
Query: 128 GMPDYTSTPENFRTLLNCRAEVCKALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRI 183
MP + PE R ++ + + + + ELSMGMSGDFE AI G+T VR+
Sbjct: 161 -MPPFFDDPEAARPFFAGLRQLAELIDSEDIPGVEMKELSMGMSGDFEAAIGEGATLVRV 219
Query: 184 GSTIFGPR 191
G+ IFG R
Sbjct: 220 GTAIFGER 227
>gi|397670281|ref|YP_006511816.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium
propionicum F0230a]
gi|395142734|gb|AFN46841.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium
propionicum F0230a]
Length = 239
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 13/164 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+W +GHLQSNKAK + ++ + K+A+ LD+ + GR+ L+VLVQVN+
Sbjct: 74 DIEWAVIGHLQSNKAKYVARFATEFQALDSL---KVASELDRRLQQEGRR-LEVLVQVNS 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRA 147
S E+ K G+ P + + + L+ GLMT+ + +T E F+ + +
Sbjct: 130 SDEDQKFGLPPQEVVTFAKQLDA-FDALDVRGLMTLAL--FTDDTERIARCFKVMRQVQQ 186
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ G D ELSMGMSGDFE AIE G+T VR+G IFG R
Sbjct: 187 ELRDVTGKGWD--ELSMGMSGDFELAIEYGATCVRVGQAIFGNR 228
>gi|88859059|ref|ZP_01133700.1| hypothetical protein PTD2_08644 [Pseudoalteromonas tunicata D2]
gi|88819285|gb|EAR29099.1| hypothetical protein PTD2_08644 [Pseudoalteromonas tunicata D2]
Length = 244
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 92/169 (54%), Gaps = 12/169 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKA-VSNLGRKPLKVLVQVN 90
DI+WHF+G +QSNK K + + V+ + KIA L++ +NL PL VL+QVN
Sbjct: 84 DIEWHFIGPIQSNKTKAI---AEHFSWVQSIERPKIAERLNQQRPTNL--PPLNVLIQVN 138
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAE 148
SGE+SKSG + + + H+ + L GLM I P D +F L C +
Sbjct: 139 ISGEQSKSGCNLADVAALSAHIS-QSKQLVLRGLMAIPAPSDDQAQLIASFSQLKTC-FD 196
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
KA + D LSMGMS D E AI GST VRIG+ IFG REY +Q
Sbjct: 197 TLKAQYPSID--TLSMGMSADVEAAIAAGSTMVRIGTDIFGAREYPVEQ 243
>gi|126175227|ref|YP_001051376.1| alanine racemase domain-containing protein [Shewanella baltica
OS155]
gi|125998432|gb|ABN62507.1| alanine racemase domain protein [Shewanella baltica OS155]
Length = 232
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 93/174 (53%), Gaps = 17/174 (9%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLK 84
K + P DI+WHF+G LQSNK + + D + V +KIA L D+ + L PL
Sbjct: 70 KEDFP-DIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIAQRLNDQRPAELA--PLN 123
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFR 140
V +Q+N S E++KSGID + L + E + + PNL GLM I P T+ E F
Sbjct: 124 VCIQINISAEDTKSGIDAAQMLPLAELI-AQLPNLALRGLMAI--PTATADTELQLKEFS 180
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L N E+ + LSMGMS D + AI GST VRIGS IFG R YA
Sbjct: 181 MLNNLFQELKSHYPSVD---TLSMGMSNDLDAAISCGSTMVRIGSAIFGERNYA 231
>gi|429734784|ref|ZP_19268784.1| pyridoxal phosphate enzyme, YggS family [Aggregatibacter
actinomycetemcomitans Y4]
gi|429151054|gb|EKX93938.1| pyridoxal phosphate enzyme, YggS family [Aggregatibacter
actinomycetemcomitans Y4]
Length = 231
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQALDRAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P
Sbjct: 113 EQRSP-HKAPLNVLIQVNISNEASKSGIQPCEILDLAKHLE-NLPHLCLRGLMAIPEPTN 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D T + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 171 DVTRQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 229
Query: 191 R 191
R
Sbjct: 230 R 230
>gi|157374371|ref|YP_001472971.1| alanine racemase [Shewanella sediminis HAW-EB3]
gi|157316745|gb|ABV35843.1| alanine racemase domain protein [Shewanella sediminis HAW-EB3]
Length = 234
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+G LQSNK K + G D + + +KIA L+ + KPL + +QVN
Sbjct: 75 EIQWHFIGPLQSNKTKVVAGL---FDWMHTLCRDKIAVRLNDQRPD-ALKPLNICIQVNI 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEV 149
SGE SKSGI PS + + + P L GLM I D + F+ L ++
Sbjct: 131 SGEASKSGIVPSELMVLANTIDT-LPKLTLRGLMAIPTATDDKRKQKDEFQQL---QSLF 186
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
K + D LSMGMS D EQA+E GST VRIGS IFG RE
Sbjct: 187 LKLKAIYPDLDTLSMGMSNDLEQAVEHGSTMVRIGSAIFGERE 229
>gi|210612737|ref|ZP_03289452.1| hypothetical protein CLONEX_01654 [Clostridium nexile DSM 1787]
gi|210151430|gb|EEA82438.1| hypothetical protein CLONEX_01654 [Clostridium nexile DSM 1787]
Length = 231
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 24/187 (12%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAK------TLLGGVPNLDMVEGVGNEKIANHL 71
K+ +KY LP DIKWH +GHLQ NK K L+ V +L + E + E +
Sbjct: 56 KVQELTEKYEQLPSDIKWHMIGHLQRNKVKYIVDKTELIHSVDSLRLAETINQEAAKKDV 115
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
VSN +L++VN + EESK G+ L ++E + L PN++ GLMTI
Sbjct: 116 ---VSN-------ILIEVNVAEEESKFGVKVEEVLPLIEKIAL-FPNIQIKGLMTIA--P 162
Query: 132 YTSTPEN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
Y PE FR L ++ + LSMGM+ D+E AIE G+T VR+G+ I
Sbjct: 163 YVKNPEENRPIFRRLRKLSVDINAKNIDNVNVSILSMGMTNDYEVAIEEGATMVRVGTGI 222
Query: 188 FGPREYA 194
FG R Y
Sbjct: 223 FGERNYT 229
>gi|53714239|ref|YP_100231.1| hypothetical protein BF2949 [Bacteroides fragilis YCH46]
gi|265766269|ref|ZP_06094310.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336411909|ref|ZP_08592369.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 2_1_56FAA]
gi|375359088|ref|YP_005111860.1| putative racemase [Bacteroides fragilis 638R]
gi|383119016|ref|ZP_09939755.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 3_2_5]
gi|423250598|ref|ZP_17231613.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL03T00C08]
gi|423253924|ref|ZP_17234854.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL03T12C07]
gi|423260783|ref|ZP_17241685.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL07T00C01]
gi|423266920|ref|ZP_17245902.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL07T12C05]
gi|423271224|ref|ZP_17250195.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL05T00C42]
gi|423276621|ref|ZP_17255561.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL05T12C13]
gi|52217104|dbj|BAD49697.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|251946220|gb|EES86597.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 3_2_5]
gi|263253937|gb|EEZ25402.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301163769|emb|CBW23324.1| putative racemase [Bacteroides fragilis 638R]
gi|335940253|gb|EGN02121.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 2_1_56FAA]
gi|387774544|gb|EIK36654.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL07T00C01]
gi|392651555|gb|EIY45217.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL03T00C08]
gi|392654482|gb|EIY48129.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL03T12C07]
gi|392696516|gb|EIY89709.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL05T12C13]
gi|392699148|gb|EIY92330.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL05T00C42]
gi|392699454|gb|EIY92632.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis
CL07T12C05]
Length = 222
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+ G+ + K+ ++K R ++ L+
Sbjct: 57 SLPKDIEWHFIGHLQTNKIKYM---APYVSMIHGIDSYKLLAEVNKQAIKAER-VIRCLL 112
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTPEN----FRTL 142
Q++ + EE+K G C ++ + N++ GLM GM T + E FR+L
Sbjct: 113 QIHIAQEETKFGFSFDECKEMLNAAEWKALANIQICGLM--GMATNTDSKEQIEREFRSL 170
Query: 143 LNCRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
NC K A + CELSMGMS D+ AI+ GST VR+GS IFG R Y
Sbjct: 171 -NCFFHEVKKQYFANEPTFCELSMGMSHDYHLAIKEGSTLVRVGSKIFGERVY 222
>gi|422384959|ref|ZP_16465094.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL096PA3]
gi|422388423|ref|ZP_16468526.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL096PA2]
gi|422393153|ref|ZP_16473206.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL099PA1]
gi|422424432|ref|ZP_16501382.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL043PA1]
gi|422428138|ref|ZP_16505049.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL087PA1]
gi|422435684|ref|ZP_16512541.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL083PA2]
gi|422438020|ref|ZP_16514864.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL092PA1]
gi|422443497|ref|ZP_16520295.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL002PA1]
gi|422445666|ref|ZP_16522413.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL027PA1]
gi|422449017|ref|ZP_16525742.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL036PA3]
gi|422451892|ref|ZP_16528593.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL030PA2]
gi|422454498|ref|ZP_16531178.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL087PA3]
gi|422457426|ref|ZP_16534088.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL030PA1]
gi|422461830|ref|ZP_16538454.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL038PA1]
gi|422474700|ref|ZP_16551164.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL056PA1]
gi|422478027|ref|ZP_16554450.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL007PA1]
gi|422480571|ref|ZP_16556974.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL063PA1]
gi|422483068|ref|ZP_16559457.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL036PA1]
gi|422485453|ref|ZP_16561815.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL043PA2]
gi|422488701|ref|ZP_16565030.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL013PA2]
gi|422493242|ref|ZP_16569542.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL086PA1]
gi|422495840|ref|ZP_16572127.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL025PA1]
gi|422498576|ref|ZP_16574848.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL002PA3]
gi|422501261|ref|ZP_16577515.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL063PA2]
gi|422506331|ref|ZP_16582554.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL036PA2]
gi|422508054|ref|ZP_16584235.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL046PA2]
gi|422513316|ref|ZP_16589439.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL087PA2]
gi|422516201|ref|ZP_16592310.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA2]
gi|422518565|ref|ZP_16594633.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL074PA1]
gi|422521821|ref|ZP_16597851.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL045PA1]
gi|422524446|ref|ZP_16600455.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL053PA2]
gi|422527208|ref|ZP_16603198.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL083PA1]
gi|422529644|ref|ZP_16605610.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL053PA1]
gi|422532414|ref|ZP_16608360.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA1]
gi|422537417|ref|ZP_16613305.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL078PA1]
gi|422539506|ref|ZP_16615379.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL013PA1]
gi|422542831|ref|ZP_16618681.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL037PA1]
gi|422545479|ref|ZP_16621309.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL082PA1]
gi|422547764|ref|ZP_16623580.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL050PA3]
gi|422549625|ref|ZP_16625425.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL050PA1]
gi|422558163|ref|ZP_16633903.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL025PA2]
gi|422561024|ref|ZP_16636711.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA1]
gi|422563118|ref|ZP_16638795.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL046PA1]
gi|422568722|ref|ZP_16644340.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL002PA2]
gi|422569887|ref|ZP_16645494.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL067PA1]
gi|422578740|ref|ZP_16654264.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA4]
gi|313764511|gb|EFS35875.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL013PA1]
gi|313772106|gb|EFS38072.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL074PA1]
gi|313792198|gb|EFS40299.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA1]
gi|313801851|gb|EFS43085.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA2]
gi|313807460|gb|EFS45947.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL087PA2]
gi|313809970|gb|EFS47691.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL083PA1]
gi|313812998|gb|EFS50712.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL025PA1]
gi|313818505|gb|EFS56219.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL046PA2]
gi|313820271|gb|EFS57985.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL036PA1]
gi|313822920|gb|EFS60634.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL036PA2]
gi|313825148|gb|EFS62862.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL063PA1]
gi|313827719|gb|EFS65433.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL063PA2]
gi|313830299|gb|EFS68013.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL007PA1]
gi|313833673|gb|EFS71387.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL056PA1]
gi|313838675|gb|EFS76389.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL086PA1]
gi|314915505|gb|EFS79336.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA4]
gi|314918210|gb|EFS82041.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL050PA1]
gi|314920025|gb|EFS83856.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL050PA3]
gi|314925158|gb|EFS88989.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL036PA3]
gi|314932039|gb|EFS95870.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL067PA1]
gi|314955909|gb|EFT00309.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL027PA1]
gi|314958221|gb|EFT02324.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL002PA1]
gi|314960058|gb|EFT04160.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL002PA2]
gi|314962857|gb|EFT06957.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL082PA1]
gi|314967775|gb|EFT11874.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL037PA1]
gi|314973304|gb|EFT17400.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL053PA1]
gi|314975982|gb|EFT20077.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL045PA1]
gi|314983999|gb|EFT28091.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA1]
gi|315078072|gb|EFT50123.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL053PA2]
gi|315080700|gb|EFT52676.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL078PA1]
gi|315085713|gb|EFT57689.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL002PA3]
gi|315096219|gb|EFT68195.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL038PA1]
gi|315101163|gb|EFT73139.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL046PA1]
gi|315105439|gb|EFT77415.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL030PA1]
gi|315108384|gb|EFT80360.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL030PA2]
gi|327326131|gb|EGE67921.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL096PA2]
gi|327331994|gb|EGE73731.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL096PA3]
gi|327443196|gb|EGE89850.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL013PA2]
gi|327445981|gb|EGE92635.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL043PA2]
gi|327448039|gb|EGE94693.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL043PA1]
gi|327450839|gb|EGE97493.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL087PA3]
gi|327453084|gb|EGE99738.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL092PA1]
gi|327453815|gb|EGF00470.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL083PA2]
gi|328754258|gb|EGF67874.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL087PA1]
gi|328754491|gb|EGF68107.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL025PA2]
gi|328760647|gb|EGF74214.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL099PA1]
Length = 198
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQVN+S
Sbjct: 35 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQVNSS 90
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 91 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 149
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 150 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAR 194
>gi|449105458|ref|ZP_21742161.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ASLM]
gi|451969762|ref|ZP_21922991.1| YggS family pyridoxal phosphate enzyme [Treponema denticola
US-Trep]
gi|448967032|gb|EMB47675.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ASLM]
gi|451701409|gb|EMD55878.1| YggS family pyridoxal phosphate enzyme [Treponema denticola
US-Trep]
Length = 246
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K + + D +E V +A L K + + G K + +L+QVNTS EE
Sbjct: 78 HFIGHLQTNKIKDV---IKYADCIESVDRLDLAEKLSKRLESEG-KTMDILIQVNTSQEE 133
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVCKAL 153
SK G P L + E + + P L+ GLMTIG+ D F+ L R E+ +
Sbjct: 134 SKFGCKPEEALALTEKI-AKLPRLKIKGLMTIGLFSDDMDKVRLCFKLLQKIRKEITEKN 192
Query: 154 GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+SMGM+GD E AIE GST +R+G+ IFG R Y
Sbjct: 193 IPNVSMEVVSMGMTGDLEVAIEEGSTLIRVGTAIFGKRNY 232
>gi|423303229|ref|ZP_17281228.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T00C23]
gi|423308050|ref|ZP_17286040.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T12C37]
gi|392688459|gb|EIY81744.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T00C23]
gi|392689035|gb|EIY82318.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T12C37]
Length = 221
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + VP + ++ G+ + K+ +DK + G K + L+
Sbjct: 56 SLPKDIEWHFIGHLQTNKIKYI---VPYVALIHGIDSYKLLAEVDKQAAKAG-KTVNCLL 111
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTPENFRT----L 142
Q++ + EE+K G C ++ R ++ GLM GM T E RT L
Sbjct: 112 QLHIAREETKFGFSFDECREMLAAGEWRELKHIRICGLM--GMATNTDNDEQIRTEFCSL 169
Query: 143 LNCRAEV-CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ EV K AE ELSMGMS D+ +AI GST +R+GS IFG R Y
Sbjct: 170 SSFFNEVKAKWFADAESFRELSMGMSHDYHEAIAAGSTLIRVGSKIFGERNY 221
>gi|416036657|ref|ZP_11573773.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347996227|gb|EGY37332.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 211
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 38 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQALDRAKIADRLN 92
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P
Sbjct: 93 EQRSP-HKAPLNVLIQVNISNEASKSGIQPCEILDLAKHLE-NLPHLCLRGLMAIPEPTN 150
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D T + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 151 DVTRQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 209
Query: 191 R 191
R
Sbjct: 210 R 210
>gi|415754523|ref|ZP_11480682.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348656203|gb|EGY71602.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 248
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 75 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQALDRAKIADRLN 129
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P
Sbjct: 130 EQRSP-HKAPLNVLIQVNISNEASKSGIQPCEILDLAKHLE-NLPHLCLRGLMAIPEPTN 187
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D T + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 188 DVTRQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 246
Query: 191 R 191
R
Sbjct: 247 R 247
>gi|260881737|ref|ZP_05405125.2| pyridoxal phosphate enzyme, YggS family [Mitsuokella multacida DSM
20544]
gi|260848290|gb|EEX68297.1| pyridoxal phosphate enzyme, YggS family [Mitsuokella multacida DSM
20544]
Length = 230
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
L D+ WH +GHLQ+NKAK V ++ V +E +A LDK +G K VLVQ
Sbjct: 69 LDRDVTWHLIGHLQTNKAKQ---AVKYFSLIHSVDSEHLARALDKEAGKIG-KCQDVLVQ 124
Query: 89 VNTSGEESKSGI---DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
VN + E+SKSGI D L +V+ + PNL GLM I P+Y E R L +
Sbjct: 125 VNLAKEDSKSGIYKEDLRPLLDLVDAL----PNLRLRGLMCIA-PNYADV-EACRPLFHE 178
Query: 146 RAEVCKALG----MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ + + + LSMGM+ D++ A+E G+ VR+G+ IFGPR+Y
Sbjct: 179 MYEIFQQVKEIPFKTANISYLSMGMTHDYQIAVEEGANIVRVGTAIFGPRQY 230
>gi|33151535|ref|NP_872888.1| K+ uptake protein [Haemophilus ducreyi 35000HP]
gi|33147755|gb|AAP95277.1| K+ uptake protein [Haemophilus ducreyi 35000HP]
Length = 234
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 26/194 (13%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + I+ + + ++ N + ++WHF+G LQSNK + + N D ++ + KIA L
Sbjct: 55 YVQEAIEKISYFNQQNKSKRLEWHFIGPLQSNKTRLV---AENFDWLQTLDRLKIAERL- 110
Query: 73 KAVSNLGR----KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG 128
NL R PL VL+Q+N S E SK+GI P + E + P+L GLM I
Sbjct: 111 ----NLQRPADLAPLNVLIQINISDEASKAGITPQQMMNFAEAIN-ALPHLCLRGLMAIP 165
Query: 129 MP-----DYTSTPENFRTLLNC-RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVR 182
P + + + L +C +AE + LSMGMS D AIE GST VR
Sbjct: 166 KPAVDIAQQKAVFQQMQQLFDCLKAEFAQV-------DTLSMGMSDDMLSAIECGSTMVR 218
Query: 183 IGSTIFGPREYAKK 196
IG+ IFG R+Y+ K
Sbjct: 219 IGTAIFGVRDYSAK 232
>gi|21674628|ref|NP_662693.1| hypothetical protein CT1814 [Chlorobium tepidum TLS]
gi|21647829|gb|AAM73035.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 229
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 23 FIDKYNLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
F++K PE + WHF+GHLQSNK + + V + MV G+ A L K
Sbjct: 62 FLEKVEAPELSGLPVSWHFIGHLQSNKVRQI---VDKVTMVHGIDKVSTAKELSK---RA 115
Query: 79 GRKPLKV--LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
G+ L V L++VN S E +K G P S L E PN+ GLMTI P +
Sbjct: 116 GQHDLTVDYLLEVNVSRESTKYGFSPDSVLQAAEEC-FALPNVRLRGLMTIASPAPSEAR 174
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L ++ + ELSMGMSGDFE+AI G+T +RIG+ IFG R
Sbjct: 175 REFAELRQTLDKLRQNAPEPSLLTELSMGMSGDFEEAILEGATMIRIGTAIFGWR 229
>gi|422490802|ref|ZP_16567117.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL020PA1]
gi|422502384|ref|ZP_16578629.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL027PA2]
gi|422552303|ref|ZP_16628094.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA3]
gi|422554246|ref|ZP_16630018.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA2]
gi|314988183|gb|EFT32274.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA2]
gi|314989986|gb|EFT34077.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL005PA3]
gi|315084372|gb|EFT56348.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL027PA2]
gi|328753527|gb|EGF67143.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL020PA1]
Length = 198
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQVN+S
Sbjct: 35 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQVNSS 90
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 91 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 149
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 150 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAR 194
>gi|424775498|ref|ZP_18202491.1| hypothetical protein C660_02005 [Alcaligenes sp. HPC1271]
gi|422889208|gb|EKU31588.1| hypothetical protein C660_02005 [Alcaligenes sp. HPC1271]
Length = 267
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 94/170 (55%), Gaps = 12/170 (7%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
+ LP D++W +GHLQSNKAK++ ++ + K A LD+ + GR L V
Sbjct: 89 REELP-DLEWAVIGHLQSNKAKSVARFASEFHALDKL---KTAEALDRRLQIEGRS-LDV 143
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRT 141
VQVNTS E+SK G+ P V + + L+ GLMT+ + D + PE F
Sbjct: 144 FVQVNTSNEDSKFGLPPEEVHAFVRELP-QFSALKVKGLMTLALMD--ADPERVRPCFAL 200
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L N R ++ + AE+ ELSMGMSGD+E AI GST VR+G IFG R
Sbjct: 201 LRNLRDQLRNDIAHAENIRELSMGMSGDYEVAISEGSTIVRVGQAIFGAR 250
>gi|339327161|ref|YP_004686854.1| type IV pilus twitching motility protein PilT [Cupriavidus necator
N-1]
gi|338167317|gb|AEI78372.1| type IV pilus twitching motility protein PilT [Cupriavidus necator
N-1]
Length = 255
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+L ++WHF+G LQSNK + + + D V V +IA L A G L+V +
Sbjct: 95 DLRHRLQWHFIGPLQSNKTRLV---AEHFDWVHAVDRLRIAERL-SAQRPAGMAALQVCI 150
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVN SGE SKSG+ P+ + H P L GLM I P+ + R RA
Sbjct: 151 QVNISGEASKSGVAPAEVPALA-HTVAALPGLRLRGLMAIPEPEDDLAAQR-RPFAAMRA 208
Query: 148 --EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ +A G+ D LSMGMSGD E AI G+T VRIG+ IFG R+Y
Sbjct: 209 MLQALRADGL--DLDTLSMGMSGDMEAAIAEGATLVRIGTAIFGARQY 254
>gi|193213296|ref|YP_001999249.1| alanine racemase domain-containing protein [Chlorobaculum parvum
NCIB 8327]
gi|193086773|gb|ACF12049.1| alanine racemase domain protein [Chlorobaculum parvum NCIB 8327]
Length = 229
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Query: 23 FIDKYNLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
F++K PE + WHF+GHLQSNK + + V + MV G+ A L K
Sbjct: 62 FLEKCEAPELSGLPVSWHFIGHLQSNKVRQI---VDKVTMVHGIDKVSTAEELSKRAVQH 118
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
G + L++VN S E +K G+ P S L E PN+ GLMTI PD +
Sbjct: 119 GLN-VDFLLEVNVSREGTKYGLGPDSVLQAAEEC-FALPNVRLRGLMTIASPDPDTARRE 176
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L + ELSMGMSGDFE+AI G+T +RIG+ IFG R
Sbjct: 177 FSELRETLDMIRNNAPEPAALSELSMGMSGDFEEAILEGATMIRIGTAIFGWR 229
>gi|449108686|ref|ZP_21745327.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ATCC
33520]
gi|449116571|ref|ZP_21753019.1| YggS family pyridoxal phosphate enzyme [Treponema denticola H-22]
gi|448953464|gb|EMB34255.1| YggS family pyridoxal phosphate enzyme [Treponema denticola H-22]
gi|448960961|gb|EMB41669.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ATCC
33520]
Length = 246
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 19 KLLRFIDKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ +KY +K HF+GHLQ+NK K + + D +E V +A L K +
Sbjct: 59 KVQELCEKYEALSSVKHETHFIGHLQTNKIKDV---IKYADCIESVDRLDLAEKLSKRLE 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
+ G K + +L+QVNTS EESK G P L + E + + P L+ GLMTIG+ D
Sbjct: 116 SEG-KTMDILIQVNTSQEESKFGCKPEEALALTEKI-AKLPCLKIKGLMTIGLFSDDMDK 173
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F+ L R E+ + +SMGM+GD E AIE GST +R+G+ IFG R Y
Sbjct: 174 VRLCFKLLQKIRKEITEKNIPNVSMEVVSMGMTGDLEVAIEEGSTLIRVGTAIFGKRNY 232
>gi|335054826|ref|ZP_08547626.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium sp.
434-HC2]
gi|333763573|gb|EGL41016.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium sp.
434-HC2]
Length = 166
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQVN+S
Sbjct: 3 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQVNSS 58
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 59 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 117
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 118 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAR 162
>gi|333909421|ref|YP_004483007.1| hypothetical protein Mar181_3061 [Marinomonas posidonica
IVIA-Po-181]
gi|333479427|gb|AEF56088.1| protein of unknown function UPF0001 [Marinomonas posidonica
IVIA-Po-181]
Length = 240
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G +QSNK++ + + V + EKIA L + + L+V +QVN
Sbjct: 83 DIEWHFIGPIQSNKSRQI---AETMHWVHSIDREKIARRLSEQRPEAMPR-LQVCIQVNI 138
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD--YTSTPENFRTLLNCRAEV 149
SGEESKSGI +VE V+ PNL+ GLM I P Y + + ++ L E+
Sbjct: 139 SGEESKSGILLEQLPVMVELVQ-SLPNLQLRGLMAIPAPQQSYEAQCQVYQPLQQAFLEL 197
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
K M + LS+GMSGD AI GST VR+G+ IFG R+YA
Sbjct: 198 SKYDRMIDT---LSIGMSGDLPAAIASGSTMVRVGTAIFGARDYA 239
>gi|298386606|ref|ZP_06996162.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 1_1_14]
gi|383121298|ref|ZP_09942013.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_6]
gi|251837513|gb|EES65606.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_6]
gi|298260983|gb|EFI03851.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 1_1_14]
Length = 222
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY LP+DI+WHF+GHLQ+NK K + +P + M+ G+ K+ ++K +
Sbjct: 47 KVQEMTAKYETLPKDIEWHFIGHLQTNKIKYM---IPYVAMIHGIDTYKLLTEVNKQAAK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EE+K G P C ++ + ++ GLM GM T
Sbjct: 104 AGR-IVNCLLQIHVAQEETKFGFSPEECKDMLHAGEWKELSHVRICGLM--GMASNTDDV 160
Query: 137 ENFRT---LLNCRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E LLN + KA A+ ELSMGMS D+ +AI GST VR+GS IFG R
Sbjct: 161 EQINREFCLLNRLFQEIKANWFADSDTFRELSMGMSHDYHEAIAAGSTLVRVGSKIFGER 220
Query: 192 EY 193
Y
Sbjct: 221 NY 222
>gi|169796921|ref|YP_001714714.1| hypothetical protein ABAYE2917 [Acinetobacter baumannii AYE]
gi|169149848|emb|CAM87739.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
Length = 235
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 78 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 134 DGQDSKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFVDAKKLFDA---VKD 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+ LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 190 QHAHPEEWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 234
>gi|260581995|ref|ZP_05849790.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
NT127]
gi|260094885|gb|EEW78778.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
NT127]
Length = 237
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WHF+G LQSNK + + + D ++ + KIA L++ + PL VL+Q+N
Sbjct: 74 NLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIAERLNEQRPT-NKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEV 149
S EESKSG+ P L + +H+ P+L GLM I P D + E FR + + ++
Sbjct: 130 SDEESKSGLQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDKIAEQEAVFRKMSDLFEQL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+AL + LSMGM+ D AI+ GST VRIG+ IFG R Y+ Q
Sbjct: 189 KQALPNQQIDT-LSMGMTDDMPSAIKCGSTMVRIGTAIFGARNYSTSQ 235
>gi|365762134|gb|EHN03741.1| YBL036C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 257
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 102/171 (59%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVL 86
LP+DIKWHF+G LQ+NK K L +PNL VE + + K A L+++ + P+
Sbjct: 82 LPDDIKWHFIGGLQTNKCKDL-AKIPNLFSVETIDSLKKAKKLNESRAKFQPDCDPIFCN 140
Query: 87 VQVNTSGEESKSGI-DPSSCLGIVEH-VRLRCPNLEFSGLMTIGMPDYTSTPE----NFR 140
VQ+NTS E+ KSG+ + + ++ + C +++ +GLMTIG D + + +F
Sbjct: 141 VQINTSHEDQKSGLYNEAEIFEVIAFFLSDECKHIKLNGLMTIGSWDVSHEDDGENKDFT 200
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL++ + ++ G++ +LSMGMS DF++A+ G++ VRIG+ I G R
Sbjct: 201 TLIDWKRKIDVKFGIS---LKLSMGMSSDFKEAVRQGTSEVRIGTDILGVR 248
>gi|213156676|ref|YP_002318337.1| hypothetical protein AB57_0946 [Acinetobacter baumannii AB0057]
gi|215484383|ref|YP_002326614.1| UPF0001 protein [Acinetobacter baumannii AB307-0294]
gi|301345278|ref|ZP_07226019.1| hypothetical protein AbauAB0_03519 [Acinetobacter baumannii AB056]
gi|301510182|ref|ZP_07235419.1| hypothetical protein AbauAB05_01354 [Acinetobacter baumannii AB058]
gi|301595729|ref|ZP_07240737.1| hypothetical protein AbauAB059_07952 [Acinetobacter baumannii
AB059]
gi|332853754|ref|ZP_08434966.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6013150]
gi|332871126|ref|ZP_08439724.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6013113]
gi|417572862|ref|ZP_12223716.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Canada BC-5]
gi|421619929|ref|ZP_16060875.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC074]
gi|421643445|ref|ZP_16083939.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-235]
gi|421646237|ref|ZP_16086689.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-251]
gi|421658800|ref|ZP_16099031.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-83]
gi|421700328|ref|ZP_16139845.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-58]
gi|421798111|ref|ZP_16234141.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-21]
gi|421801761|ref|ZP_16237718.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Canada BC1]
gi|445466394|ref|ZP_21450373.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC338]
gi|213055836|gb|ACJ40738.1| hypothetical protein AB57_0946 [Acinetobacter baumannii AB0057]
gi|213987503|gb|ACJ57802.1| UPF0001 protein [Acinetobacter baumannii AB307-0294]
gi|332728440|gb|EGJ59815.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6013150]
gi|332731712|gb|EGJ62993.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6013113]
gi|400208430|gb|EJO39400.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Canada BC-5]
gi|404570710|gb|EKA75783.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-58]
gi|408508128|gb|EKK09814.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-235]
gi|408517624|gb|EKK19162.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-251]
gi|408701647|gb|EKL47070.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC074]
gi|408709496|gb|EKL54742.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-83]
gi|410395284|gb|EKP47591.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-21]
gi|410405018|gb|EKP57071.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Canada BC1]
gi|444778205|gb|ELX02224.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC338]
Length = 230
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFVDAKKLFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+ LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEEWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|163781970|ref|ZP_02176969.1| hypothetical protein HG1285_17594 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882502|gb|EDP76007.1| hypothetical protein HG1285_17594 [Hydrogenivirga sp. 128-5-R1-1]
Length = 227
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 9/162 (5%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G LQ+NK K L+G V ++ V + +A+ ++K G +VL++VN
Sbjct: 72 DIDWHFIGRLQTNKVKYLMGKV---SLIHSVDRKSLADEIEKRAQRAGLIQ-RVLLEVNV 127
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
GEE+K G+ P + +V+ P+L+ GLMTI P Y PE R + E+ +
Sbjct: 128 GGEETKGGVAPGELPELFSYVK-GLPSLKVEGLMTI--PPYREDPEEVRPFFSELRELKR 184
Query: 152 ALG--MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L LSMGMS DFE AIE G+T VR+G+ +FG R
Sbjct: 185 RLEEEFGTTLKHLSMGMSHDFEVAIEEGATIVRVGTLLFGER 226
>gi|339443313|ref|YP_004709318.1| putative enzyme with a TIM-barrel fold [Clostridium sp. SY8519]
gi|338902714|dbj|BAK48216.1| predicted enzyme with a TIM-barrel fold [Clostridium sp. SY8519]
Length = 230
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WH +GHLQ NK K L+G +++ V + ++A + + +S + +L++
Sbjct: 67 LPADIRWHMIGHLQRNKVKYLMG---KTELIHSVDSLRLAEEISR-LSVKNQICTDILIE 122
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VN +GEESK G +V + P + GLMT+ YT PEN R E
Sbjct: 123 VNIAGEESKFGTSRQEAFDLV-RAAAQLPGIRIRGLMTVA--PYTEHPENNRGYFRKIRE 179
Query: 149 VCKALGMAEDQCE------LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ ++ +A + + LSMGM+GDFE AIE G+T VR+G+ IFG R Y
Sbjct: 180 L--SVDIAAENIDNVHMDFLSMGMTGDFEIAIEEGATHVRVGTGIFGERNY 228
>gi|406861738|gb|EKD14791.1| alanine racemase family protein (ISS) [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 315
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 98/222 (44%), Gaps = 59/222 (26%)
Query: 29 LPEDIKWHFVGHLQS--------------------------------------------- 43
LP D+KWHF+G LQS
Sbjct: 77 LPRDVKWHFIGGLQSTLSVGFGVKALEMSPLDLLILWRYELPVEDIGRRNLNHCRGCTLG 136
Query: 44 --NKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL---GRKPLKVLVQVNTSGEESKS 98
+K + L VPNL +V V + K A L+ ++L +PL + +QVNTSGE SKS
Sbjct: 137 PGDKCRLLASSVPNLHIVSSVDSLKKATQLEAGRASLSPAASEPLNIHIQVNTSGEASKS 196
Query: 99 GIDPS-SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE------NFRTLLNCRAEVCK 151
G P + + + CPNL GLMTIG + + +F TL R + +
Sbjct: 197 GCAPGPDTSALAKQILTTCPNLRLLGLMTIGAIARSKAVKEGEENADFVTLREERDRLQR 256
Query: 152 AL--GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L G ELSMGMS DFE AIE GS VR+GSTIFG R
Sbjct: 257 ELEEGAWNGTLELSMGMSDDFEGAIEGGSDEVRVGSTIFGAR 298
>gi|401838709|gb|EJT42191.1| YBL036C-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 257
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 102/171 (59%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PLKVL 86
LP+DIKWHF+G LQ+NK K L +PNL VE + + K A L+++ + P+
Sbjct: 82 LPDDIKWHFIGGLQTNKCKDL-AKIPNLFSVETIDSLKKAKKLNESRAKFQPDCDPIFCN 140
Query: 87 VQVNTSGEESKSGI-DPSSCLGIVEH-VRLRCPNLEFSGLMTIGMPDYTSTPE----NFR 140
VQ+NTS E+ KSG+ + + ++ + C +++ +GLMTIG D + + +F
Sbjct: 141 VQINTSHEDQKSGLYNEAEIFEVIAFFLSNECKHIKLNGLMTIGSWDVSHEDDGENKDFT 200
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
TL++ + ++ G++ +LSMGMS DF++A+ G++ VRIG+ I G R
Sbjct: 201 TLIDWKRKIDVKFGIS---LKLSMGMSSDFKEAVRQGTSEVRIGTDILGVR 248
>gi|422431056|ref|ZP_16507935.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL072PA2]
gi|422534289|ref|ZP_16610213.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL072PA1]
gi|314978481|gb|EFT22575.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL072PA2]
gi|315088867|gb|EFT60843.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL072PA1]
Length = 198
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQVN+S
Sbjct: 35 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQVNSS 90
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 91 AEPQKSGIAPEEAVDFARELAA-FNSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 149
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 150 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAR 194
>gi|357634528|ref|ZP_09132406.1| protein of unknown function UPF0001 [Desulfovibrio sp. FW1012B]
gi|357583082|gb|EHJ48415.1| protein of unknown function UPF0001 [Desulfovibrio sp. FW1012B]
Length = 228
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 30 PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
P + WHF+GHLQ NK K +G ++ + N ++A L K G P V +QV
Sbjct: 69 PAGLTWHFIGHLQRNKGKLAIG---RFALIHTLDNLELARLLQKKTGEQGLAPQAVCLQV 125
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNC 145
N +GE KSG+ P + E V P L SGLM +P P+ F L
Sbjct: 126 NVAGEAQKSGVSPEGLPALAEAVAA-MPALSLSGLMV--LPPVFDDPDGARPAFARLREL 182
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
R + LG+A LSMGMSGD E AI G+T VR+G+ +FGPR+
Sbjct: 183 RDGLAARLGLALPV--LSMGMSGDLEAAILEGATHVRVGTDLFGPRQ 227
>gi|375012245|ref|YP_004989233.1| pyridoxal phosphate enzyme, YggS family [Owenweeksia hongkongensis
DSM 17368]
gi|359348169|gb|AEV32588.1| pyridoxal phosphate enzyme, YggS family [Owenweeksia hongkongensis
DSM 17368]
Length = 225
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 13/184 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ DKY LP+DI+WH +GH+Q NK K + P + +V G+ K LDK +
Sbjct: 49 KIQEMADKYEQLPKDIRWHMIGHVQGNKIKYM---APFVHLVHGIDKAKRLKELDKEAAK 105
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIV-EHVRLRCPNLEFSGLMTIGMPDYTSTP 136
R + L+QV+ + E++K G D ++ E + PN+ GLM GM +T
Sbjct: 106 NDR-VIDCLLQVHIAKEDTKFGFDEVELTEVLTESPEEKYPNVRIRGLM--GMATFTDNE 162
Query: 137 ----ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
F+ L ++ LG+ LSMGMSGD++ AI+ GS VRIGS+IFG R
Sbjct: 163 LQVRNEFKGLFQIYSKAKAQLGLPHFDI-LSMGMSGDYQLAIDEGSNMVRIGSSIFGERN 221
Query: 193 YAKK 196
Y K
Sbjct: 222 YQSK 225
>gi|298346049|ref|YP_003718736.1| alanine racemase domain-containing protein [Mobiluncus curtisii
ATCC 43063]
gi|304390192|ref|ZP_07372146.1| YggS family pyridoxal phosphate enzyme [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|298236110|gb|ADI67242.1| alanine racemase domain protein [Mobiluncus curtisii ATCC 43063]
gi|304326674|gb|EFL93918.1| YggS family pyridoxal phosphate enzyme [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 248
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
+W +G+LQ NKAK ++ L ++ + K+A L++ + GR L+V+++VNTSG
Sbjct: 85 RWVQIGNLQRNKAKLIVAYGAELQSLD---SAKLAQTLNRLLDQAGRT-LEVMIEVNTSG 140
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP----DYTSTPENFRTLLNCRAEV 149
E++K G+ P L + V + P L GLMT+ E F L R V
Sbjct: 141 EDAKHGVAPEETLELARLV-IDQPRLHLIGLMTVAAHIDRVGERGVFEMFSQLAGLREAV 199
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
G A D ELSMGMSGDFE AI GST VR+GS +FGPR+YA+K
Sbjct: 200 LGLPGGA-DCRELSMGMSGDFELAIAAGSTCVRVGSALFGPRDYAQK 245
>gi|90580285|ref|ZP_01236092.1| Predicted enzyme with a TIM-barrel fold protein [Photobacterium
angustum S14]
gi|90438587|gb|EAS63771.1| Predicted enzyme with a TIM-barrel fold protein [Vibrio angustum
S14]
Length = 236
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 14/167 (8%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNTSG 93
WHF+G +QSNK + + + D V + K A L D+ +++ PL+VL+QVN+S
Sbjct: 80 WHFIGPIQSNKTRLV---AEHFDWVHSIDRIKTAKRLSDQRPTSMA--PLQVLLQVNSSA 134
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCK 151
E +KSGI + + + PN+E GLM+I P DY S F+ L A +
Sbjct: 135 EATKSGITLAEVPALAAEIA-AMPNIELRGLMSIPQPATDYDSQFATFKAL----AVTLE 189
Query: 152 ALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L + + LSMGMSGD E AI GST VRIG+ IFG R+Y K+
Sbjct: 190 QLKLTYPNVDTLSMGMSGDMEAAIAAGSTIVRIGTAIFGARDYGNKE 236
>gi|408419894|ref|YP_006761308.1| alanine racemanse [Desulfobacula toluolica Tol2]
gi|405107107|emb|CCK80604.1| alanine racemanse [Desulfobacula toluolica Tol2]
Length = 230
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 89/168 (52%), Gaps = 23/168 (13%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+GHLQSNKAK V + + V K+AN ++K + K K+L+QVN E
Sbjct: 76 WHFIGHLQSNKAKF---AVNYFEYIHTVDTLKLANQINKQAKKIN-KIQKILLQVNIGEE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLR-----CPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
E+KSG GI E V L N+ GLM GMP Y S PE R A +
Sbjct: 132 ETKSGT------GIEEAVELANQISALENVSLQGLM--GMPPYFSDPEQARIYFKKMAAI 183
Query: 150 CKALGMAED-----QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
K + MA LSMGMS DF+ AIE GST VR+G++IFG R+
Sbjct: 184 KKEI-MAHQFKNVAMNHLSMGMSNDFKVAIEEGSTMVRVGTSIFGKRD 230
>gi|359451316|ref|ZP_09240722.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20480]
gi|358042869|dbj|GAA76971.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20480]
Length = 237
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G +QSNK+ + N D V+ V KIA L+ A + PL VL+QVN
Sbjct: 83 DIIWHFIGPIQSNKSALV---AENFDWVQSVDRIKIAKRLN-AQRPTSKPPLNVLIQVNI 138
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEV 149
S EE+KSG P + E + +C L GLM I D T+ + F L C ++
Sbjct: 139 SAEEAKSGCHPDDIANLAEFIS-QCDQLRLRGLMAIPAKSDDPTTQTQYFEQLQTCFDKL 197
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
KA D LSMGMS D E AI GST VRIG+ IFG R
Sbjct: 198 -KAQYPQLD--TLSMGMSNDVEAAISAGSTMVRIGTDIFGTR 236
>gi|82703845|ref|YP_413411.1| hypothetical protein Nmul_A2732 [Nitrosospira multiformis ATCC
25196]
gi|82411910|gb|ABB76019.1| Protein of unknown function UPF0001 [Nitrosospira multiformis ATCC
25196]
Length = 244
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP I+WHF+G +QSNK + + N V V +KIA L K PL++ +
Sbjct: 75 DLP--IEWHFIGPIQSNKTRRI---AENFAWVHSVDRKKIAERLSKDRPE-ALPPLQICL 128
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVN SGE+SKSG+ P + HV P L G+M I P+ T R+
Sbjct: 129 QVNVSGEDSKSGVAPEEVADLAAHV-AELPRLRLRGVMAI--PELTKFTALQRSQFRMLK 185
Query: 148 EVCKALGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E L + D +SMGMS D E AI+ G+T VRIG+ IFGPR Y
Sbjct: 186 EAYDQLKQSGYDVDTISMGMSEDLELAIQEGATMVRIGTAIFGPRRY 232
>gi|315654634|ref|ZP_07907540.1| K+ uptake protein [Mobiluncus curtisii ATCC 51333]
gi|315491098|gb|EFU80717.1| K+ uptake protein [Mobiluncus curtisii ATCC 51333]
Length = 247
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
+W +G+LQ NKAK ++ L ++ + K+A L++ + GR L+V+++VNTSG
Sbjct: 84 RWIQIGNLQRNKAKLIVAYGAELQSLD---SAKLAQTLNRLLDQAGRT-LEVMIEVNTSG 139
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP----DYTSTPENFRTLLNCRAEV 149
E++K G+ P L + V + P L GLMT+ E F L R V
Sbjct: 140 EDAKHGVAPEETLELARLV-IDQPRLHLIGLMTVAAHVDRVGERGVFEMFSQLAGLREAV 198
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
G A D ELSMGMSGDFE AI GST VR+GS +FGPR+YA+K
Sbjct: 199 LGLPGGA-DCRELSMGMSGDFELAIAAGSTCVRVGSALFGPRDYAQK 244
>gi|421661478|ref|ZP_16101654.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC110]
gi|408715890|gb|EKL61012.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC110]
Length = 230
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFVDAKKLFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+ LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHLEEWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|261868167|ref|YP_003256089.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415770811|ref|ZP_11485057.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416102708|ref|ZP_11588890.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444345824|ref|ZP_21153828.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261413499|gb|ACX82870.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348008557|gb|EGY48823.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348656592|gb|EGY74202.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443542365|gb|ELT52702.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 231
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P
Sbjct: 113 EQRSP-HKAPLNVLIQVNISNEASKSGIQPCEILDLAKHLE-NLPHLCLRGLMAIPEPTN 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D T + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 171 DVTRQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 229
Query: 191 R 191
R
Sbjct: 230 R 230
>gi|393758554|ref|ZP_10347374.1| hypothetical protein QWA_05525 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162990|gb|EJC63044.1| hypothetical protein QWA_05525 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 267
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 94/170 (55%), Gaps = 12/170 (7%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
+ LP D++W +GHLQSNKAK++ ++ + K A LD+ + GR L V
Sbjct: 89 REELP-DLEWAVIGHLQSNKAKSVARFAREFHALDKL---KTAEALDRRLQIEGRS-LDV 143
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRT 141
VQVNTS E+SK G+ P V + + L+ GLMT+ + D + PE F
Sbjct: 144 FVQVNTSNEDSKFGLPPQDVHAFVRELP-QFSALKVKGLMTLALMD--ADPERVRPCFAL 200
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L N R ++ + AE+ ELSMGMSGD+E AI GST VR+G IFG R
Sbjct: 201 LRNLRDQLRNDIPHAENMHELSMGMSGDYEVAISEGSTIVRVGQAIFGAR 250
>gi|416068026|ref|ZP_11582614.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348001502|gb|EGY42244.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 248
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 75 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 129
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P
Sbjct: 130 EQRSP-HKAPLNVLIQVNISNEASKSGIQPGEILDLAKHLE-NLPHLCLRGLMAIPEPTN 187
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D T + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 188 DVTRQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 246
Query: 191 R 191
R
Sbjct: 247 R 247
>gi|345882862|ref|ZP_08834317.1| YggS family pyridoxal phosphate enzyme [Prevotella sp. C561]
gi|345044408|gb|EGW48448.1| YggS family pyridoxal phosphate enzyme [Prevotella sp. C561]
Length = 223
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+GHLQ+NK K + P + M+E V + K+ +DK + R + VL++
Sbjct: 59 LPKDIEWHFIGHLQTNKVKYI---APYISMIEAVDSLKLLKEIDKQAAKHNR-IINVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
++ + EESK G P +C ++ + + N+ SGLM M E + + A
Sbjct: 115 LHIAEEESKYGFSPDACRELLANGEWKELKNVHISGLMM--MASNVDDREQIKREMTLAA 172
Query: 148 EVCKALG---MAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ L A+D E S GMS D++ A+E ST VR+G+TIFGPR Y
Sbjct: 173 DLFDELKEKYFADDSAFKERSWGMSHDYDIAVECRSTMVRVGTTIFGPRVY 223
>gi|451812492|ref|YP_007448946.1| type III pyridoxal 5-phosphate-dependent enzyme [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451778394|gb|AGF49342.1| type III pyridoxal 5-phosphate-dependent enzyme [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 236
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 26 KYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLK 84
KYN + ++IKW +G+LQ+NKAK + +D +E + ++A LDK + L +K LK
Sbjct: 69 KYNKISKNIKWIMIGNLQTNKAKE---AINYIDELESMDRLELALVLDKHLK-LEKKSLK 124
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTL 142
L+QV TS E K G+DP + V + +LE GLMTI D+ + F L
Sbjct: 125 TLIQVKTSSEPQKYGLDPDQLIDFVGKISENYRSLEIVGLMTIAENSKDHKIIRKCFSLL 184
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
N +V + D +LSMGMS DFE AIE G+T VR+GS +FG R Y
Sbjct: 185 RNLMEKVNEQKIPRVDLRKLSMGMSNDFEIAIEEGATEVRLGSILFGKRIYT 236
>gi|417555501|ref|ZP_12206570.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-81]
gi|417560537|ref|ZP_12211416.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC137]
gi|421201345|ref|ZP_15658504.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC109]
gi|421456426|ref|ZP_15905768.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-123]
gi|421635386|ref|ZP_16075988.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-13]
gi|421694855|ref|ZP_16134472.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-692]
gi|421805016|ref|ZP_16240910.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-A-694]
gi|421807492|ref|ZP_16243352.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC035]
gi|395523119|gb|EJG11208.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC137]
gi|395563377|gb|EJG25030.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC109]
gi|400210854|gb|EJO41818.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-123]
gi|400391918|gb|EJP58965.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-81]
gi|404567090|gb|EKA72218.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-692]
gi|408702205|gb|EKL47618.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-13]
gi|410410066|gb|EKP61986.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-A-694]
gi|410416473|gb|EKP68245.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC035]
Length = 230
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 73 DIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P +V + + P + GLM I PD T+ + + L + V
Sbjct: 129 DGQDSKDGCAPEDVAELVAQMS-QLPKIRLRGLMVIPAPDNTAAFVDAKKLFDA---VKD 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
E+ LSMGMS D E AI GST VR+G+ +FG R+Y++K
Sbjct: 185 QHAHPEEWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQK 229
>gi|378709489|ref|YP_005274383.1| alanine racemase [Shewanella baltica OS678]
gi|418024036|ref|ZP_12663020.1| protein of unknown function UPF0001 [Shewanella baltica OS625]
gi|315268478|gb|ADT95331.1| alanine racemase domain protein [Shewanella baltica OS678]
gi|353536909|gb|EHC06467.1| protein of unknown function UPF0001 [Shewanella baltica OS625]
Length = 239
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
DI+WHF+G LQSNK + + D + V +KIA L D+ + L PL + +Q+N
Sbjct: 82 DIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAELA--PLNICIQIN 136
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCR 146
S E++KSGID + L + E + + PNL GLM I P T+ E F L N
Sbjct: 137 ISAEDTKSGIDAAQMLPLAELIA-QLPNLALRGLMAI--PTATADTELQLKEFSMLNNLF 193
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
E+ + LSMGMS D + AI GST VRIGS IFG R YA
Sbjct: 194 QELKSHYPNVD---TLSMGMSNDLDAAISCGSTMVRIGSAIFGERNYA 238
>gi|390450611|ref|ZP_10236199.1| hypothetical protein A33O_14185 [Nitratireductor aquibiodomus RA22]
gi|389662158|gb|EIM73737.1| hypothetical protein A33O_14185 [Nitratireductor aquibiodomus RA22]
Length = 220
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ +G LQSNKA V D++E + EKIA L + GR+P ++ VQVNT
Sbjct: 75 DIELRLIGPLQSNKAAD---AVALFDVIESIDREKIARALSTEMQKQGRQP-RLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
EE K+GIDP + V+H R L GLM I D P +F L AE
Sbjct: 131 GLEEQKAGIDPRQAVTFVKHCREEY-GLAIEGLMCIPPLDENPGP-HFALLKKLAAEA-- 186
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++C SMGMSGDFE+AI G+TSVR+GS IFG R
Sbjct: 187 ----GVEKC--SMGMSGDFEKAIAFGATSVRVGSAIFGAR 220
>gi|220928048|ref|YP_002504957.1| alanine racemase domain-containing protein [Clostridium
cellulolyticum H10]
gi|219998376|gb|ACL74977.1| alanine racemase domain protein [Clostridium cellulolyticum H10]
Length = 235
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
+LL DK++ E I+WH +GHLQ NK K ++ V M+ V + ++A +D
Sbjct: 63 ELLEKYDKFD--ESIQWHLIGHLQKNKVKYIIDKVH---MIHSVDSFELAKEIDNRAGKA 117
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
G++ + +L+QVN SGEE+K GI P V + + N+ G+MTI P + P+
Sbjct: 118 GKR-MNILLQVNVSGEETKFGIKPDEVNEYVGFIS-QLKNISLRGMMTIA-P-FAGNPQE 173
Query: 139 ----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F+ L + ++ + LSMGMS DFE AIE GS VRIG+ IFG R Y
Sbjct: 174 IRPIFKKLYDIYIDIKNKRIDNVNMDYLSMGMSNDFEVAIEEGSNIVRIGTGIFGKRNYP 233
Query: 195 KK 196
+K
Sbjct: 234 QK 235
>gi|251797863|ref|YP_003012594.1| alanine racemase [Paenibacillus sp. JDR-2]
gi|247545489|gb|ACT02508.1| alanine racemase domain protein [Paenibacillus sp. JDR-2]
Length = 242
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 9/158 (5%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G LQ+NK K ++G + + +A +DK S LG + LVQVN SGE
Sbjct: 88 WHFIGSLQTNKVKDVIG---KFTYIHSLDRLSLAQAIDKRASQLGL-TVPCLVQVNVSGE 143
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN---FRTLLNCRAEVCK 151
+SK G+DP + ++ +L GLMT+ P T E FR+L R E+ +
Sbjct: 144 QSKHGLDPEQLPAFLAELK-ELSSLRIIGLMTMA-PYETEAEETRPIFRSLRKLRDEMNE 201
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
+AE ELSMGMSGDFE AIE G+T +R+G+ + G
Sbjct: 202 RAILAESMTELSMGMSGDFEVAIEEGATWIRLGTILVG 239
>gi|165975509|ref|YP_001651102.1| hypothetical protein APJL_0052 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307249250|ref|ZP_07531247.1| hypothetical protein appser4_670 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|165875610|gb|ABY68658.1| hypothetical protein APJL_0052 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306858774|gb|EFM90833.1| hypothetical protein appser4_670 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 231
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 95/179 (53%), Gaps = 12/179 (6%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F + NL +WHF+G LQSNK + + N D ++ V KIA L+ A
Sbjct: 62 KIAYFAQQPNL----EWHFIGPLQSNKTRLV---AENFDWIQTVDRLKIAERLN-AQRPK 113
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
+ PL VL+Q+N S E SKSGI P + + + + PNL GLM I P+ S E
Sbjct: 114 NKAPLNVLIQINISDEASKSGIQPEGLDELAKAIS-QLPNLRLRGLMAIPKPE--SEVEQ 170
Query: 139 FRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ L ++ L + + LSMGMS D AIE GST VRIG+ IFG R+Y+ K
Sbjct: 171 QKIALRKMQQLFDRLQAEFEGIDTLSMGMSDDMAAAIECGSTMVRIGTAIFGARDYSAK 229
>gi|328953088|ref|YP_004370422.1| hypothetical protein Desac_1385 [Desulfobacca acetoxidans DSM
11109]
gi|328453412|gb|AEB09241.1| protein of unknown function UPF0001 [Desulfobacca acetoxidans DSM
11109]
Length = 243
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 94/172 (54%), Gaps = 25/172 (14%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ WHF+GHLQSNKA V D++ V +A L++A +N+ K VL++VN +
Sbjct: 86 VSWHFIGHLQSNKAN---AAVRLFDLIHSVDRLSLAQALNRAAANIN-KVQDVLLEVNLA 141
Query: 93 GEESKSGIDPSS-------CLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRT 141
GE SKSGI + C G+ H+R+R GLM MP + + PE F+
Sbjct: 142 GEASKSGISSTELPDLIRVCHGL-SHLRVR-------GLM--AMPPWFADPEQARPYFKK 191
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
L R +V + ELSMGMSGD+E AIE G+T VRIG+ +FG R +
Sbjct: 192 LRILRDQVQSQGQPGLELVELSMGMSGDYEVAIEEGATLVRIGTALFGSRPH 243
>gi|422323712|ref|ZP_16404751.1| hypothetical protein HMPREF0005_01116 [Achromobacter xylosoxidans
C54]
gi|317401303|gb|EFV81943.1| hypothetical protein HMPREF0005_01116 [Achromobacter xylosoxidans
C54]
Length = 239
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +GHLQ+NKAK L ++ + +A L + + GR L VLVQV TS
Sbjct: 77 LQWVLIGHLQTNKAKDAARDATELQSLDRI---DLAEALHRRLVLEGRT-LDVLVQVKTS 132
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E SK G+ PS + + P L GLMT+ + PD FR+L R ++
Sbjct: 133 SEPSKYGMAPSDVSAFLRRIVAEFPTLRVRGLMTMAVNSPDPGEVRACFRSLRELRDQLR 192
Query: 151 KAL--GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
G++ D+ LSMGMSGDFE AIE GST VRIG+ IFG R Y Q
Sbjct: 193 HEAIEGVSLDR--LSMGMSGDFELAIEEGSTEVRIGTAIFGARSYPDPQ 239
>gi|332799438|ref|YP_004460937.1| hypothetical protein TepRe1_1484 [Tepidanaerobacter acetatoxydans
Re1]
gi|438002602|ref|YP_007272345.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial homolog PROSC [Tepidanaerobacter acetatoxydans
Re1]
gi|332697173|gb|AEE91630.1| protein of unknown function UPF0001 [Tepidanaerobacter
acetatoxydans Re1]
gi|432179396|emb|CCP26369.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial homolog PROSC [Tepidanaerobacter acetatoxydans
Re1]
Length = 230
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+++WH +GHLQ NK K LG M++ + + +A + K + ++ + VLVQVN
Sbjct: 72 NVQWHLIGHLQRNKVKMALGL---FSMIQSIDSLPLAEEIQKRAEQI-QQTVDVLVQVNI 127
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E++K G+DP + +E + L PNL GLM I + PE+ R E+ K
Sbjct: 128 GREKTKYGVDPDNTKSFIEKIAL-FPNLRVRGLMAIA--PFKQNPEDVRPYFRQLREIFK 184
Query: 152 ALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ + LSMGMS DFE A+E G+ VRIG+ IFG RE
Sbjct: 185 NIKQTHIDNVNMEYLSMGMSNDFEVAVEEGANMVRIGTGIFGVRE 229
>gi|319941855|ref|ZP_08016176.1| hypothetical protein HMPREF9464_01395 [Sutterella wadsworthensis
3_1_45B]
gi|319804508|gb|EFW01378.1| hypothetical protein HMPREF9464_01395 [Sutterella wadsworthensis
3_1_45B]
Length = 238
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 11/172 (6%)
Query: 26 KYNLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD-KAVSNLGRKPL 83
+ N PE ++WHF+G LQ+NK++ + D V+ V +IA L + NL PL
Sbjct: 74 RTNHPELHLEWHFIGPLQANKSRMV---AERFDWVQTVDRLRIAERLSAQRPDNL--PPL 128
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
VL++VN E SKSGI P + V P L GLM+I P T E L
Sbjct: 129 NVLIEVNVDAEASKSGISPEELPALAAAVS-ELPRLRLRGLMSIPAP--AETYEGKMKPL 185
Query: 144 NCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
A + KA Q + LSMGMS D +A+E GST VRIGS IFGPR Y+
Sbjct: 186 LAMASLFKAFQEKYPQADTLSMGMSADLTEAVEAGSTMVRIGSAIFGPRSYS 237
>gi|50842463|ref|YP_055690.1| hypothetical protein PPA0978 [Propionibacterium acnes KPA171202]
gi|289425389|ref|ZP_06427166.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK187]
gi|289427244|ref|ZP_06428960.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
J165]
gi|295130540|ref|YP_003581203.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK137]
gi|335051235|ref|ZP_08544163.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium sp.
409-HC1]
gi|342211617|ref|ZP_08704342.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium sp.
CC003-HC2]
gi|354606937|ref|ZP_09024907.1| YggS family pyridoxal phosphate enzyme [Propionibacterium sp.
5_U_42AFAA]
gi|365962674|ref|YP_004944240.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365964916|ref|YP_004946481.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365973850|ref|YP_004955409.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes TypeIA2 P.acn33]
gi|386023923|ref|YP_005942227.1| hypothetical protein PAZ_c10210 [Propionibacterium acnes 266]
gi|387503353|ref|YP_005944582.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes 6609]
gi|407935376|ref|YP_006851018.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes C1]
gi|417929292|ref|ZP_12572676.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK182]
gi|419421158|ref|ZP_13961386.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes PRP-38]
gi|422396388|ref|ZP_16476419.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL097PA1]
gi|50840065|gb|AAT82732.1| conserved protein [Propionibacterium acnes KPA171202]
gi|289154367|gb|EFD03055.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK187]
gi|289159713|gb|EFD07901.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
J165]
gi|291377313|gb|ADE01168.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK137]
gi|327330199|gb|EGE71948.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL097PA1]
gi|332675380|gb|AEE72196.1| hypothetical protein PAZ_c10210 [Propionibacterium acnes 266]
gi|333767313|gb|EGL44562.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium sp.
409-HC1]
gi|335277398|gb|AEH29303.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes 6609]
gi|340767161|gb|EGR89686.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium sp.
CC003-HC2]
gi|340773415|gb|EGR95907.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
SK182]
gi|353557052|gb|EHC26421.1| YggS family pyridoxal phosphate enzyme [Propionibacterium sp.
5_U_42AFAA]
gi|365739355|gb|AEW83557.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365741597|gb|AEW81291.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365743849|gb|AEW79046.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes TypeIA2 P.acn33]
gi|379977649|gb|EIA10974.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes PRP-38]
gi|407903957|gb|AFU40787.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes C1]
gi|456739732|gb|EMF64271.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes FZ1/2/0]
Length = 238
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQVN+S
Sbjct: 75 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQVNSS 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 131 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 189
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 190 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAR 234
>gi|315657455|ref|ZP_07910337.1| cell division protein YlmE [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315491927|gb|EFU81536.1| cell division protein YlmE [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 248
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
+W +G+LQ NKAK ++ L ++ + K+A L++ + GR L+V+++VNTSG
Sbjct: 85 RWVQIGNLQRNKAKLIVAYGAELQSLD---SAKLAQTLNRLLDQAGRT-LEVMIEVNTSG 140
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP----DYTSTPENFRTLLNCRAEV 149
E++K G+ P L + V + P L GLMT+ E F L R V
Sbjct: 141 EDAKHGVAPEETLELARLV-IDQPRLHLIGLMTVAAHIDRVGECGVFEMFSQLAGLREAV 199
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
G A D ELSMGMSGDFE AI GST VR+GS +FGPR+YA+K
Sbjct: 200 LGLPGGA-DCRELSMGMSGDFELAIAAGSTCVRVGSALFGPRDYAQK 245
>gi|329890839|ref|ZP_08269182.1| hypothetical protein BDIM_25470 [Brevundimonas diminuta ATCC 11568]
gi|328846140|gb|EGF95704.1| hypothetical protein BDIM_25470 [Brevundimonas diminuta ATCC 11568]
Length = 253
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 94/170 (55%), Gaps = 20/170 (11%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP ++WH VGHLQSNK K L D + + K+A L+K + GR +KV V
Sbjct: 86 DLP--MRWHVVGHLQSNKVKYLTRLA---DEFHALDSLKLAEVLNKRLETDGRD-MKVYV 139
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR---TLLN 144
QVNTSGEESK G+ P L +E + P L+ GLMT+ + ++ + R TLL
Sbjct: 140 QVNTSGEESKFGLHPDDALDFIERLEA-FPRLKPQGLMTLAI--FSDDADRVRPCFTLLR 196
Query: 145 C---RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
RAE A LSMGM+GD+E A+ G+T VR+G IFGPR
Sbjct: 197 SLRDRAERIDARITG-----LSMGMTGDYELAVREGATVVRVGQAIFGPR 241
>gi|160876289|ref|YP_001555605.1| alanine racemase domain-containing protein [Shewanella baltica
OS195]
gi|160861811|gb|ABX50345.1| alanine racemase domain protein [Shewanella baltica OS195]
Length = 232
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
DI+WHF+G LQSNK + + D + V +KIA L D+ + L PL + +Q+N
Sbjct: 75 DIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAELA--PLNICIQIN 129
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCR 146
S E++KSGID + L + E + + PNL GLM I P T+ E F L N
Sbjct: 130 ISAEDTKSGIDAAQMLPLAELI-AQLPNLALRGLMAI--PTATADTELQLKEFSMLNNLF 186
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
E+ + LSMGMS D + AI GST VRIGS IFG R YA
Sbjct: 187 QELKSHYPNVD---TLSMGMSNDLDAAISCGSTMVRIGSAIFGERNYA 231
>gi|134093571|ref|YP_001098646.1| hypothetical protein HEAR0290 [Herminiimonas arsenicoxydans]
gi|133737474|emb|CAL60517.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 234
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLK 84
+ +LP ++WHF+G +QSNK + + + D V V EKIA+ L ++ + L PL
Sbjct: 73 RPDLP--LEWHFIGPVQSNKTRPI---AEHFDWVHAVDREKIAHRLSEQRPATL--PPLN 125
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLN 144
+ +QVN SGE SKSG P+ G+ + + + P+L GLM I P+ + R+
Sbjct: 126 ICLQVNISGEASKSGALPADAPGLAKAI-AKLPHLRLRGLMAIPEPEDDEVRQR-RSFHQ 183
Query: 145 CRA--EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
R E +A G+ D LSMGMS D AI G+T VRIGS IFG R YAK
Sbjct: 184 LRVLYEQLRAEGLPLDT--LSMGMSADMPAAIAEGATIVRIGSAIFGTRNYAK 234
>gi|39997639|ref|NP_953590.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
sulfurreducens PCA]
gi|409912993|ref|YP_006891458.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
sulfurreducens KN400]
gi|39984531|gb|AAR35917.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
sulfurreducens PCA]
gi|298506579|gb|ADI85302.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
sulfurreducens KN400]
Length = 231
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 93/172 (54%), Gaps = 25/172 (14%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+GHLQSNK K L G V + V+ + +A +D+ + L +LVQVN +
Sbjct: 72 VEWHFIGHLQSNKVKYLAGLVTCIHSVDRLS---LAEEIDRQWAKLD-AVCDILVQVNIA 127
Query: 93 GEESKSGIDPS------SCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
EE+KSG S + + + HVR+R GLMT MP + PE R
Sbjct: 128 DEETKSGTSASELTDLVAAMATLPHVRVR-------GLMT--MPPFFDDPEEARPYFREL 178
Query: 147 AEVCKALGMAED-----QCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ A+ AE+ ELSMGMSGDFE A+E G+T VRIG+ +FG R Y
Sbjct: 179 RRLADAVA-AENIPGISMTELSMGMSGDFEAAVEEGATLVRIGTALFGERVY 229
>gi|385799635|ref|YP_005836039.1| alanine racemase [Halanaerobium praevalens DSM 2228]
gi|309388999|gb|ADO76879.1| alanine racemase domain protein [Halanaerobium praevalens DSM 2228]
Length = 234
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+GHLQ NK K L+ + N M++ + + ++A ++K + + VLV+VN
Sbjct: 77 DIDWHFIGHLQRNKVKYLMR-MENCQMIQSIDSLRLAKEVNKRAKK-NERIIPVLVEVNM 134
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GMPDYTSTPENFRTLLNCRAEV 149
+ +E+K GI P ++ ++ NL+ GLMTI + D F+ + +V
Sbjct: 135 AKDENKFGIMPEEVKDFLKQIK-EFENLKIEGLMTILPYLDDSQKLRSYFKQMKKIYDDV 193
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
C+ L ELSMGM+ D++ AIE G+T VR+G IFG REY
Sbjct: 194 CENLMPLN---ELSMGMTNDYQIAIEEGATIVRVGRAIFGEREY 234
>gi|153001553|ref|YP_001367234.1| alanine racemase domain-containing protein [Shewanella baltica
OS185]
gi|151366171|gb|ABS09171.1| alanine racemase domain protein [Shewanella baltica OS185]
Length = 232
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
DI+WHF+G LQSNK + + D + V +KIA L D+ + L PL + +Q+N
Sbjct: 75 DIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAELA--PLNICIQIN 129
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCR 146
S E++KSGID + L + E + + PNL GLM I P T+ E F L N
Sbjct: 130 ISAEDTKSGIDAAQMLPLAELIA-QLPNLALRGLMAI--PTATADTELQLKEFSMLNNLF 186
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
E+ + LSMGMS D + AI GST VRIGS IFG R YA
Sbjct: 187 QELKSHYPNVD---TLSMGMSNDLDAAISCGSTMVRIGSAIFGERNYA 231
>gi|325855519|ref|ZP_08171856.1| pyridoxal phosphate enzyme, YggS family [Prevotella denticola CRIS
18C-A]
gi|325483802|gb|EGC86761.1| pyridoxal phosphate enzyme, YggS family [Prevotella denticola CRIS
18C-A]
Length = 223
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 8/170 (4%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+E V + K+ ++K + R + VL+
Sbjct: 58 SLPKDIEWHFIGHLQTNKVKYI---APYISMIEAVDSLKLLKEINKQAARYDR-VINVLL 113
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMP-DYTSTPENFRTLLNC 145
+++ + EESK G P++C ++E+ + N+ SGLM + D S TL
Sbjct: 114 ELHIAEEESKYGFTPAACRELLENGEWKELRNVHISGLMMMASNVDNRSQIRGEMTLAAD 173
Query: 146 RAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ KA A+D E S GMS D++ A+E ST VR+G+ IFGPR Y
Sbjct: 174 LFDELKARFFADDPAFKERSWGMSHDYDIAVECRSTMVRVGTAIFGPRVY 223
>gi|387121676|ref|YP_006287559.1| succinyl-diaminopimelate desuccinylase, partial [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|385876168|gb|AFI87727.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 169
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 10/173 (5%)
Query: 21 LRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L++ S +
Sbjct: 4 IQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQALDRAKIADRLNEQRSP-HK 57
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPEN 138
PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P D T +
Sbjct: 58 APLNVLIQVNISNEASKSGIQPCEILDLAKHLE-NLPHLCLRGLMAIPEPTNDVTRQEQV 116
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG R
Sbjct: 117 FYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGKR 168
>gi|416044957|ref|ZP_11575169.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347995878|gb|EGY37018.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
Length = 169
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 10/173 (5%)
Query: 21 LRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L++ S +
Sbjct: 4 IQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLNEQRSP-HK 57
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPEN 138
PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P D T +
Sbjct: 58 APLNVLIQVNISNEASKSGIQPCEILDLAKHLE-NLPHLCLRGLMAIPEPTNDVTRQEQV 116
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG R
Sbjct: 117 FYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKYGSTMVRVGTAIFGKR 168
>gi|152994581|ref|YP_001339416.1| alanine racemase domain-containing protein [Marinomonas sp. MWYL1]
gi|150835505|gb|ABR69481.1| alanine racemase domain protein [Marinomonas sp. MWYL1]
Length = 242
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 10/167 (5%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G +QSNK++ + + V + EKIA L + PL V +QVN
Sbjct: 83 DIEWHFIGPIQSNKSRLI---AETMHWVHSIDREKIARRLSEQRPK-DLPPLNVCIQVNI 138
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE--NFRTLLNCRAEV 149
SGEESK+G+ S +V + PNL GLM I P + + + L E+
Sbjct: 139 SGEESKAGVALSELNDMVALI-TELPNLRLRGLMAIPAPQKSHEAQCLVYEPLRQAFVEL 197
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
K+ M + LS+GMSGD AI+ GST VR+G+ IFG R+Y+ K
Sbjct: 198 SKSDSMIDT---LSIGMSGDLPAAIQSGSTMVRVGTAIFGERDYSAK 241
>gi|154248852|ref|YP_001409677.1| alanine racemase domain-containing protein [Fervidobacterium
nodosum Rt17-B1]
gi|154152788|gb|ABS60020.1| alanine racemase domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 235
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 10/168 (5%)
Query: 25 DKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLK 84
++ N P DI+WH++G +Q+NK K + VP ++ V ++K S +G K K
Sbjct: 75 EQLNFP-DIEWHYIGRIQTNKLKYI---VPVAYLIHSVYRINEIEEINKIASKMG-KIQK 129
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG-MPDYTSTPENFRTLL 143
+L++VN SGEE+K GI P++ +++ + N++ GLMT+ + ST + FR L
Sbjct: 130 ILIEVNVSGEETKGGISPNNIEDLLKESE-KFKNVQVIGLMTMAPFVEPESTRKYFRMLR 188
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R + K + ELSMGMS DFE A+E GST VRIG+ IFG R
Sbjct: 189 EIRDGISKRFP---NLKELSMGMSNDFEVAVEEGSTIVRIGTAIFGER 233
>gi|402836121|ref|ZP_10884671.1| pyridoxal phosphate enzyme, YggS family [Mogibacterium sp. CM50]
gi|402272133|gb|EJU21356.1| pyridoxal phosphate enzyme, YggS family [Mogibacterium sp. CM50]
Length = 232
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 20/185 (10%)
Query: 19 KLLRFIDKYN--LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--A 74
K+ + KY+ PE +WH +GHLQ+NK K ++ V M+ V + K+A +DK A
Sbjct: 57 KVQELLSKYDEIYPE--RWHLIGHLQTNKVKQVIDKVT---MIHSVDSIKLAKEIDKRAA 111
Query: 75 VSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS 134
++L + +L+++N + EESK+GI + +V + C ++ G+M I P
Sbjct: 112 AADL---VMDILIEINLAEEESKTGIAKAEVFELVASIVNTCDHIRVRGIMCI--PPRGD 166
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCE------LSMGMSGDFEQAIEMGSTSVRIGSTIF 188
TPE+ R + L +E LSMGMS DFE AIE G+T VR+GS+IF
Sbjct: 167 TPEDSRKYFREARSIYDKLRNSELPTARAPIDTLSMGMSADFEIAIEEGATIVRVGSSIF 226
Query: 189 GPREY 193
G R+Y
Sbjct: 227 GQRDY 231
>gi|262408826|ref|ZP_06085371.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294648180|ref|ZP_06725720.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CC
2a]
gi|294810758|ref|ZP_06769406.1| pyridoxal phosphate enzyme, YggS family [Bacteroides xylanisolvens
SD CC 1b]
gi|298484090|ref|ZP_07002258.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. D22]
gi|336404970|ref|ZP_08585656.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_30]
gi|345508881|ref|ZP_08788500.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D1]
gi|229447145|gb|EEO52936.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D1]
gi|262353037|gb|EEZ02132.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292636455|gb|EFF54933.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CC
2a]
gi|294442091|gb|EFG10910.1| pyridoxal phosphate enzyme, YggS family [Bacteroides xylanisolvens
SD CC 1b]
gi|298269771|gb|EFI11364.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. D22]
gi|335939642|gb|EGN01515.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_30]
Length = 222
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 17/184 (9%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQ+NK K + +P + M+ G+ + K+ ++K
Sbjct: 47 KVQEMTAKYESLPKDIEWHFIGHLQTNKIKYM---IPYVAMIHGIDSYKLLAEVNKQAVK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSC---LGIVEHVRLRCPNLEFSGLMTIGMPDYTS 134
GR + L+Q++ + EE+K G P C L + E L ++ GLM GM T
Sbjct: 104 AGR-TVNCLLQIHVAQEETKFGFSPEECKEMLNVGEWKEL--THVRICGLM--GMASNTD 158
Query: 135 TPEN----FRTLLNCRAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
E F +L E+ D CELSMGMS D+ +AI GST VR+GS IFG
Sbjct: 159 CIEQINREFCSLNRLFNEIKTTWFTHSDTFCELSMGMSHDYHEAIAAGSTLVRVGSKIFG 218
Query: 190 PREY 193
R Y
Sbjct: 219 ERNY 222
>gi|384083116|ref|ZP_09994291.1| alanine racemase domain-containing protein [gamma proteobacterium
HIMB30]
Length = 235
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 12/163 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WH++GH+QSNK K + D V + EKIA+ L++A +G KPL +L+QVN
Sbjct: 76 DIEWHYIGHIQSNKTKIIATA---FDWVHTIDREKIASRLNEA--RVG-KPLNILIQVNV 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE---NFRTLLNCRAE 148
E+KSG+ P + E + PNL GLM+I PD S + + +TL + E
Sbjct: 130 DLAETKSGVAPGDLKRLAETI-WALPNLRLRGLMSI--PDPVSEEDLKRSHQTLRSLFEE 186
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ +A E LSMGM+ D A+ GST VRIG+ +FG R
Sbjct: 187 LKQAHPAPEIFDTLSMGMTNDLALAVTEGSTMVRIGTALFGAR 229
>gi|316934046|ref|YP_004109028.1| alanine racemase domain-containing protein [Rhodopseudomonas
palustris DX-1]
gi|315601760|gb|ADU44295.1| alanine racemase domain protein [Rhodopseudomonas palustris DX-1]
Length = 259
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 12/166 (7%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP I+W +GHLQ+NK K L+ ++ + ++A L++ + GR L V V
Sbjct: 89 DLP--IRWSIIGHLQTNKVKYLVRFASEFHALDSL---RLAEELNRRLDAEGRD-LDVFV 142
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNC 145
QVNTSGE SK G+ P + + P L+ GLMT+ + D + FR L +
Sbjct: 143 QVNTSGEASKYGLAPDDLVPFARRLS-EYPRLKPRGLMTLAIFSADTERVRQCFRLLRDL 201
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R +A + D +LSMGMSGDFE AIE G+T VR+G IFG R
Sbjct: 202 RD---RATSVHPDLTQLSMGMSGDFEAAIEEGATVVRVGQAIFGAR 244
>gi|294506685|ref|YP_003570743.1| hypothetical protein SRM_00870 [Salinibacter ruber M8]
gi|294343013|emb|CBH23791.1| conserved hypothetical protein [Salinibacter ruber M8]
Length = 252
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D+KWH VGHLQ NKAK + + D + + + ++A L+K + R L LVQVN
Sbjct: 93 DVKWHMVGHLQRNKAKFI---ARHADWFDALDSPRLAEELNKRAAKNDRV-LPCLVQVNI 148
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
+G++ K G+ PS ++H + +L GLM +G + PE+ R E+
Sbjct: 149 TGDDQKYGLAPSETHEYLDHC-AQYDHLAVEGLMALG--SFVDDPEDVRGEFQKMRELFD 205
Query: 152 ALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + ELS+GMS DFE AIE GST +R+G++IFGPR+Y
Sbjct: 206 TYDASGNPQVEMTELSIGMSNDFEVAIEEGSTMIRLGTSIFGPRDY 251
>gi|440286219|ref|YP_007338984.1| pyridoxal phosphate enzyme, YggS family [Enterobacteriaceae
bacterium strain FGI 57]
gi|440045741|gb|AGB76799.1| pyridoxal phosphate enzyme, YggS family [Enterobacteriaceae
bacterium strain FGI 57]
Length = 234
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + ++ +RF + D++WHF+G LQSNK++ + + D V KIA L
Sbjct: 58 YVQEGVEKIRFFQDKGV-TDLQWHFIGPLQSNKSRLV---AEHFDWCHTVDRLKIATRLS 113
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
++ ++L PL VL+QVN S E+SKSGI+P + + V PNL GLM I P+
Sbjct: 114 EQRPAHL--PPLNVLIQVNISDEQSKSGIEPEAVDALAAEVSA-LPNLCLRGLMAIPAPE 170
Query: 132 YTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
T + F + LS+GMS D E AI GST VRIG+ IFG R
Sbjct: 171 -TEYDKQFAVAQQMAVAFARLKTHYPTVDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGAR 229
Query: 192 EYAKK 196
+Y KK
Sbjct: 230 DYTKK 234
>gi|225378092|ref|ZP_03755313.1| hypothetical protein ROSEINA2194_03752 [Roseburia inulinivorans DSM
16841]
gi|225210093|gb|EEG92447.1| hypothetical protein ROSEINA2194_03752 [Roseburia inulinivorans DSM
16841]
Length = 231
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 19/176 (10%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP----LK 84
+P+DIKWH +GHLQ NK K ++G V ++ V + ++A + N+ K +
Sbjct: 67 MPKDIKWHMIGHLQRNKVKYIVGQVA---LIHSVDSYRLAEEI-----NIQAKKKNIIVP 118
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN---FRT 141
+LV+VN + EESK GI + +VE + N+ GLMTI P + +N FR
Sbjct: 119 ILVEVNIAHEESKFGISEEDAIQLVEEI-AELENVRIKGLMTIA-PYVENAEDNRLYFRK 176
Query: 142 LLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ + ++ A + E LSMGM+GD+E AIE G+T VR+G+ IFG R Y K+
Sbjct: 177 IKDLSVDIA-AKNIDNVSMEILSMGMTGDYEVAIEEGATMVRVGTGIFGARNYNKQ 231
>gi|374366177|ref|ZP_09624260.1| type IV pilus twitching motility protein PilT [Cupriavidus
basilensis OR16]
gi|373102302|gb|EHP43340.1| type IV pilus twitching motility protein PilT [Cupriavidus
basilensis OR16]
Length = 242
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
L + + WHF+G LQSNK + + D V + +IA L A +G PL+V +Q
Sbjct: 72 LRDQLSWHFIGPLQSNKTRAV---AEQFDWVHAIDRLRIAERL-SAQRPVGMAPLQVCLQ 127
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VN SGE SKSG+ P + V P L GLM I P ++ T R RA
Sbjct: 128 VNISGEASKSGVAPDEVPALARAVAA-LPGLRLRGLMAIPEP-HSDTAAQRRPFAALRAL 185
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ D LSMGMS D + AI G+T VRIG+ IFG R+YA
Sbjct: 186 LATLRAAGLDVDTLSMGMSADMDAAIAEGATVVRIGTAIFGARDYA 231
>gi|83592477|ref|YP_426229.1| hypothetical protein Rru_A1141 [Rhodospirillum rubrum ATCC 11170]
gi|386349196|ref|YP_006047444.1| hypothetical protein F11_05885 [Rhodospirillum rubrum F11]
gi|83575391|gb|ABC21942.1| Protein of unknown function UPF0001 [Rhodospirillum rubrum ATCC
11170]
gi|346717632|gb|AEO47647.1| hypothetical protein F11_05885 [Rhodospirillum rubrum F11]
Length = 271
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 91/163 (55%), Gaps = 8/163 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+W +GHLQ+NK K L+ ++ + ++A +++ + GR L V VQVNTS
Sbjct: 95 IRWSIIGHLQTNKVKYLVRFAAEFHALDSL---RLAEEMNRRLDAQGRD-LDVFVQVNTS 150
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC-RAEVCK 151
GE SK G+ P+ + VE + P L+ GLMT+ + +++ + RT RA +
Sbjct: 151 GEASKYGLPPAEVIPFVERL-ADYPRLKPRGLMTLAI--FSADTDRVRTCFRLLRALRDQ 207
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ +LSMGMSGD+E AIE G+ VR+G IFGPR A
Sbjct: 208 TATLHPGMTQLSMGMSGDYEAAIEEGADVVRVGQAIFGPRPTA 250
>gi|42527817|ref|NP_972915.1| hypothetical protein TDE2315 [Treponema denticola ATCC 35405]
gi|41818645|gb|AAS12834.1| conserved hypothetical protein TIGR00044 [Treponema denticola ATCC
35405]
Length = 275
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K + + D +E V +A L K + + G K + +L+QVNTS EE
Sbjct: 107 HFIGHLQTNKIKDV---IKYADCIESVDRLDLAEKLSKRLESEG-KTMDILIQVNTSQEE 162
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVCKAL 153
SK G P L + E + + P L+ GLMTIG+ D F+ L R E+ +
Sbjct: 163 SKFGCKPEEALALTEKIA-KLPCLKIKGLMTIGLFSDDMDKVRLCFKLLQKIRKEITEKN 221
Query: 154 GMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+SMGM+GD E AIE GST +R+G+ IFG R Y
Sbjct: 222 IPNVSMEVVSMGMTGDLEVAIEEGSTLIRVGTAIFGKRNY 261
>gi|449127729|ref|ZP_21764000.1| YggS family pyridoxal phosphate enzyme [Treponema denticola SP33]
gi|448943563|gb|EMB24451.1| YggS family pyridoxal phosphate enzyme [Treponema denticola SP33]
Length = 246
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 19 KLLRFIDKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ +KY +K HF+GHLQ+NK K + + D +E V +A L K +
Sbjct: 59 KVQELCEKYEPLSSVKHETHFIGHLQTNKIKDV---IKYADCIESVDRLDLAEKLSKRLE 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
+ G K + +L+QVNTS EESK G P L + E + + P L+ GLMTIG+ D
Sbjct: 116 SEG-KTMDILIQVNTSQEESKFGCKPEEALALTEKI-AKLPCLKIKGLMTIGLFSDDMDK 173
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F+ L R E+ + +SMGM+GD E AIE GST +R+G+ IFG R Y
Sbjct: 174 VRLCFKLLQKIRKEITEKNIPNVSMEVVSMGMTGDLEVAIEEGSTLIRVGTAIFGKRNY 232
>gi|333978623|ref|YP_004516568.1| hypothetical protein Desku_1183 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822104|gb|AEG14767.1| protein of unknown function UPF0001 [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 240
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP D++WH +GHLQ+NK K ++G V ++ + + ++A + + G ++VLV
Sbjct: 67 QLPVDVEWHLIGHLQTNKVKYIIGKV---HLIHSLDSWRLAREISRRAQERGLT-VEVLV 122
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVN SGEE+K G+ P V V P + GLMTI S PE R +
Sbjct: 123 QVNISGEETKYGLPPGEVRSFVAGV-AELPGIRVRGLMTIA--PLVSDPEQARPIFRELY 179
Query: 148 EVCKALGMAEDQCEL---SMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
++ L + L SMGMS DF A+E G+ +R+GS IFGPR ++ +
Sbjct: 180 QMASWLKQELPELPLDFLSMGMSNDFTVAVEEGANIIRVGSAIFGPRPNPRRDNH 234
>gi|309790060|ref|ZP_07684634.1| alanine racemase domain protein [Oscillochloris trichoides DG-6]
gi|308227915|gb|EFO81569.1| alanine racemase domain protein [Oscillochloris trichoides DG6]
Length = 246
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 24/179 (13%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP +WH +GHLQ NKA+ V D+++ V + ++A L++ +LGR+ + +L+
Sbjct: 77 DLPRRPRWHMIGHLQRNKARL---AVELFDLIQSVDSLRLAESLNQHAHDLGRR-VPILL 132
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVR-----------LRCPNLEFSGLMTIGMPDYTSTP 136
QVN SGE SK G GI H L PNLE GLMTI P P
Sbjct: 133 QVNVSGEVSKEGFALPG--GIANHAAYAQLSTEIERILTLPNLEVRGLMTI--PPLAEEP 188
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E FR L R ++ + A + +LSMGMS DFE AI +T +R+G IFG R
Sbjct: 189 EASRPYFRLLRELRTDLARRWPQA-NWRDLSMGMSDDFEVAISEEATIIRLGRAIFGER 246
>gi|83816855|ref|YP_444832.1| hypothetical protein SRU_0694 [Salinibacter ruber DSM 13855]
gi|83758249|gb|ABC46362.1| conserved hypothetical protein TIGR00044 [Salinibacter ruber DSM
13855]
Length = 233
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D+KWH VGHLQ NKAK + + D + + + ++A L+K + R L LVQVN
Sbjct: 74 DVKWHMVGHLQRNKAKFI---ARHADWFDALDSPRLAEELNKRAAKNDRV-LPCLVQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
+G++ K G+ PS ++H + +L GLM +G + PE+ R E+
Sbjct: 130 TGDDQKYGLAPSETHEYLDHC-AQYDHLAVEGLMALG--SFVDDPEDVRGEFQKMRELFD 186
Query: 152 ALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + ELS+GMS DFE AIE GST +R+G++IFGPR+Y
Sbjct: 187 TYDASGNPQVEMTELSIGMSNDFEVAIEEGSTMIRLGTSIFGPRDY 232
>gi|119470546|ref|ZP_01613249.1| hypothetical protein ATW7_12046 [Alteromonadales bacterium TW-7]
gi|119446247|gb|EAW27524.1| hypothetical protein ATW7_12046 [Alteromonadales bacterium TW-7]
Length = 237
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 88/162 (54%), Gaps = 10/162 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G +QSNK+ + N D V+ V KIA L+ A + PL VL+QVN
Sbjct: 83 DIIWHFIGPIQSNKSALV---AENFDWVQSVDRIKIAKRLN-AQRPTSKPPLNVLIQVNI 138
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEV 149
S EE+KSG P+ + + + +C L GLM+I D T+ + F L C ++
Sbjct: 139 SAEEAKSGCHPNDIANLADFIS-QCDQLRLRGLMSIPAKSDDPTTQTQYFEQLQTCFDKL 197
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
KA D LSMGMS D E AI GST VRIG+ IFG R
Sbjct: 198 -KAQYPQLD--TLSMGMSNDVEAAISAGSTMVRIGTDIFGTR 236
>gi|449104491|ref|ZP_21741231.1| YggS family pyridoxal phosphate enzyme [Treponema denticola AL-2]
gi|449111193|ref|ZP_21747792.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ATCC
33521]
gi|449113988|ref|ZP_21750470.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ATCC
35404]
gi|449119368|ref|ZP_21755764.1| YggS family pyridoxal phosphate enzyme [Treponema denticola H1-T]
gi|449121758|ref|ZP_21758104.1| YggS family pyridoxal phosphate enzyme [Treponema denticola MYR-T]
gi|449124359|ref|ZP_21760678.1| YggS family pyridoxal phosphate enzyme [Treponema denticola OTK]
gi|448942690|gb|EMB23584.1| YggS family pyridoxal phosphate enzyme [Treponema denticola OTK]
gi|448949199|gb|EMB30024.1| YggS family pyridoxal phosphate enzyme [Treponema denticola MYR-T]
gi|448950358|gb|EMB31180.1| YggS family pyridoxal phosphate enzyme [Treponema denticola H1-T]
gi|448957427|gb|EMB38169.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ATCC
35404]
gi|448959456|gb|EMB40177.1| YggS family pyridoxal phosphate enzyme [Treponema denticola ATCC
33521]
gi|448963510|gb|EMB44188.1| YggS family pyridoxal phosphate enzyme [Treponema denticola AL-2]
Length = 246
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 19 KLLRFIDKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ +KY +K HF+GHLQ+NK K + + D +E V +A L K +
Sbjct: 59 KVQELCEKYEPLSSVKHETHFIGHLQTNKIKDV---IKYADCIESVDRLDLAEKLSKRLE 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
+ G K + +L+QVNTS EESK G P L + E + + P L+ GLMTIG+ D
Sbjct: 116 SEG-KTMDILIQVNTSQEESKFGCKPEEALALTEKI-AKLPCLKIKGLMTIGLFSDDMDK 173
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F+ L R E+ + +SMGM+GD E AIE GST +R+G+ IFG R Y
Sbjct: 174 VRLCFKLLQKIRKEITEKNIPNVSMEVVSMGMTGDLEVAIEEGSTLIRVGTAIFGKRNY 232
>gi|410866050|ref|YP_006980661.1| Pyridoxal phosphate enzyme, YggS family [Propionibacterium
acidipropionici ATCC 4875]
gi|410822691|gb|AFV89306.1| Pyridoxal phosphate enzyme, YggS family [Propionibacterium
acidipropionici ATCC 4875]
Length = 236
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I W +GHLQ+NKA+ + ++ + ++A LD + N GR + VLV++NT
Sbjct: 74 EISWAIIGHLQTNKARQVARFASEFQALDSL---RLARELDHRLQNEGRG-IDVLVEINT 129
Query: 92 SGEESKSGIDPSSC------LGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRTLL 143
SGE KSG+ LG + +R+R GLMT+ + +P F+ ++
Sbjct: 130 SGEPQKSGVALDDAVALCRQLGAFDSLRVR-------GLMTVALNSADPSPVGACFQRVV 182
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + + G D ELSMGMSGDFE AI G+T+VR+G IFGPR Y
Sbjct: 183 DLQERLRDEAGGVSDWGELSMGMSGDFELAIAHGATTVRVGQAIFGPRSY 232
>gi|315633758|ref|ZP_07889048.1| YggS family pyridoxal phosphate enzyme [Aggregatibacter segnis ATCC
33393]
gi|315477800|gb|EFU68542.1| YggS family pyridoxal phosphate enzyme [Aggregatibacter segnis ATCC
33393]
Length = 228
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 99/181 (54%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F + + +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 55 YVQEGVEKIQFCQQQQI--ELEWHFIGPLQSNKTRLV---AEYFDWMQTLERAKIADRLN 109
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ + PL VL+QVN S E SKSG+ P L + +HV P+L GLM I P
Sbjct: 110 EQRPP-HKAPLNVLIQVNISNEASKSGVQPDDILPLAKHVE-NLPHLRLRGLMAIPEPTD 167
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + FR + + +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 168 DVVQQEQTFRQMHTLFEGLQQALPHAQIDT-LSMGMTDDMQSAIKCGSTMVRVGTAIFGK 226
Query: 191 R 191
R
Sbjct: 227 R 227
>gi|431804917|ref|YP_007231820.1| alanine racemase domain-containing protein [Pseudomonas putida
HB3267]
gi|430795682|gb|AGA75877.1| alanine racemase domain-containing protein [Pseudomonas putida
HB3267]
Length = 228
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK K + + D V V KIA L + G PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLPPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCKA 152
+SKSG P+ + + V PNL GLM I P D + F TL ++ +
Sbjct: 132 DSKSGCTPADLPALAKAVA-ALPNLRLRGLMAIPEPTDDRAAQEAAFATL----RQLQEG 186
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
LG+ D LSMGMS D E AI G+T VRIG+ +FG R+Y +
Sbjct: 187 LGLGLD--TLSMGMSHDLEAAIAQGATWVRIGTALFGARDYGQ 227
>gi|448084609|ref|XP_004195648.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
gi|359377070|emb|CCE85453.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
Length = 300
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DIKWHF+G LQ+ K K L + NL V+ V K L+ + ++V +Q
Sbjct: 130 LPMDIKWHFIGGLQTGKCKDLSKNISNLYSVKAVDTLKKCQKLNDTRKSANGSVIEVYLQ 189
Query: 89 VNTSGEESKSGI---DPSSCLGIVEH-VRLRCPNLEFSGLMTIG-MPDYTSTPEN--FRT 141
+NTSGEE KSG D S +++ + + GLMTIG + S EN F+
Sbjct: 190 INTSGEEQKSGFSLHDKSELFATIDYFMSGNASYVNLKGLMTIGSFSESLSGEENSDFKK 249
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L + ++E+ + + + ELSMGMS DF+ AI GS VR+G++IFG R
Sbjct: 250 LRDLKSELEEKFNL---KLELSMGMSNDFKDAIIQGSNEVRVGTSIFGTR 296
>gi|402813725|ref|ZP_10863320.1| pyridoxal phosphate enzyme, YggS family [Paenibacillus alvei DSM
29]
gi|402509668|gb|EJW20188.1| pyridoxal phosphate enzyme, YggS family [Paenibacillus alvei DSM
29]
Length = 247
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 7/161 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+GHLQ+NK K ++ V ++ V K+ L+ + K + +LVQ+NTS
Sbjct: 76 VEWHFIGHLQTNKVKDVVKYVT---LIHSVDRLKLGQDLNHQLVK-ENKTMDILVQINTS 131
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS--TPENFRTLLNCRAEVC 150
EESK G P + L +VE + + L GLMTIG + T+ T FR L + + +V
Sbjct: 132 YEESKFGASPETALELVEQLS-QFETLNVKGLMTIGKLNATNDETRHCFRLLKSIQTQVR 190
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + LSMGMSGDF+ AIE G+T +R+G+++FG R
Sbjct: 191 EKKFPRVEMDILSMGMSGDFKVAIEEGATIIRVGTSVFGQR 231
>gi|339483206|ref|YP_004694992.1| hypothetical protein Nit79A3_1783 [Nitrosomonas sp. Is79A3]
gi|338805351|gb|AEJ01593.1| protein of unknown function UPF0001 [Nitrosomonas sp. Is79A3]
Length = 255
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DIKW +GHLQ+NKAK L ++ + K+A LDK + N GR + V VQVN+
Sbjct: 87 DIKWSIIGHLQTNKAKYLARFANEFQALDSL---KVAEELDKRLQNEGR-AIDVYVQVNS 142
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEV 149
SGE SK G+ P V + + +L GLMT+ + D+ E F + +A +
Sbjct: 143 SGEASKFGLAPEDVRAFVMELP-KFSSLRIKGLMTLAIFSADHDRVRECFIKMREIQAML 201
Query: 150 CKA--LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ G++ D ELSMGMSGD+E AIE G+T VR+G IFG R
Sbjct: 202 RQESPAGLSFD--ELSMGMSGDYELAIEEGATVVRVGQAIFGKR 243
>gi|71030978|ref|XP_765131.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352087|gb|EAN32848.1| hypothetical protein, conserved [Theileria parva]
Length = 215
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 9/162 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
L +KWHF+GHLQ+NK LL +PNL M++ V + ++ N L + + L R+ + VL+Q
Sbjct: 59 LDSTVKWHFIGHLQTNKCAKLLQ-IPNLHMIQSVDSMELFNKLSQLTTKLNRQ-INVLIQ 116
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVR--LRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
VNT+ + ++ GID + I+ VR +R ++F GLMTIG T ++F L +
Sbjct: 117 VNTTLKPTQYGIDYRNITLIISLVRSVMRSERVKFRGLMTIG----DGTKDSFHRLNGVK 172
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
+ + G + +SMGMS D++ AI+MGS +RIG+ IF
Sbjct: 173 KRLEEEFGELGEFV-MSMGMSSDYKLAIQMGSNHIRIGTLIF 213
>gi|339489818|ref|YP_004704346.1| alanine racemase domain-containing protein [Pseudomonas putida S16]
gi|338840661|gb|AEJ15466.1| alanine racemase domain-containing protein [Pseudomonas putida S16]
Length = 228
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK K + + D V V KIA L + G PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLPPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCKA 152
+SKSG P+ + + V PNL GLM I P D + F TL ++ +
Sbjct: 132 DSKSGCTPADLPALAKAVA-ALPNLRLRGLMAIPEPTDDRAAQEAAFATL----RQLQEG 186
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
LG+ D LSMGMS D E AI G+T VRIG+ +FG R+Y +
Sbjct: 187 LGLGLD--TLSMGMSHDLEAAIAQGATWVRIGTALFGARDYGQ 227
>gi|374296349|ref|YP_005046540.1| pyridoxal phosphate enzyme, YggS family [Clostridium clariflavum
DSM 19732]
gi|359825843|gb|AEV68616.1| pyridoxal phosphate enzyme, YggS family [Clostridium clariflavum
DSM 19732]
Length = 235
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 20/184 (10%)
Query: 19 KLLRFIDKYNL-PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
++ + KY++ D WH +GHLQ+NK K ++ V ++ V +A ++
Sbjct: 62 RVQELVQKYDIINRDCNWHLIGHLQTNKVKYIIDKVK---LIHSVDRYSLAAEINTRAQK 118
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+G+K + +LVQVN SGE+SK G L ++ + NL GLMTI P YT+ PE
Sbjct: 119 IGKK-VDILVQVNISGEQSKFGAAAQDALELIRKIS-ELENLRVRGLMTIA-P-YTTNPE 174
Query: 138 NFRTL--------LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
R + ++ E + M LSMGMS DFE AIE G+ VRIG+ +FG
Sbjct: 175 AVRYVFSGLRKLSIDIEKENINNINMEY----LSMGMSNDFEVAIEEGANIVRIGTALFG 230
Query: 190 PREY 193
R+Y
Sbjct: 231 ERKY 234
>gi|308271245|emb|CBX27854.1| UPF0001 protein aq_274 [uncultured Desulfobacterium sp.]
Length = 231
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 25 DKYNL--PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP 82
+KY L ++ WHF+GHLQ+NKAK V D++ V + ++A LD + K
Sbjct: 61 EKYPLLSSNEVPWHFIGHLQTNKAKY---AVKMFDLIHTVDSYRLAVELDAQAKKIN-KV 116
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN---- 138
++L+QVN E+SKSGI + +++ + NL GLM I P + PE
Sbjct: 117 QQILIQVNIGKEKSKSGITQETAFDLIKKIG-GLNNLRVKGLMVI--PPFYDDPERTRPY 173
Query: 139 FRTLLNCRAEVCKALGMAEDQC----ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
F L R + L + Q ELSMGMSGDFE IE G+T VRIG+ IFG RE
Sbjct: 174 FAALRILRDRINSLLEPEDIQNIRMEELSMGMSGDFETGIEEGATLVRIGTAIFGERE 231
>gi|378696225|ref|YP_005178183.1| hypothetical protein HIB_01480 [Haemophilus influenzae 10810]
gi|301168748|emb|CBW28339.1| predicted enzyme [Haemophilus influenzae 10810]
Length = 237
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 10/187 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ +++ + N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 57 YVQEGVEKIQYFESQNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 111
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-D 131
+ + PL VL+Q+N S EESKSGI P L + +H+ P+L GLM I P D
Sbjct: 112 EQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTD 169
Query: 132 YTSTPEN-FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ E FR + + ++ + L + LSMGM+ D AI+ ST VRIG++IFG
Sbjct: 170 KIAEQEAVFRKMSDLFEQLKQVLPNQQIDT-LSMGMTDDMPSAIKCSSTMVRIGTSIFGA 228
Query: 191 REYAKKQ 197
R Y+ Q
Sbjct: 229 RNYSTSQ 235
>gi|118472564|ref|YP_886394.1| hypothetical protein MSMEG_2032 [Mycobacterium smegmatis str. MC2
155]
gi|118173851|gb|ABK74747.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 252
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++W +GHLQ+NKAK + + + N + A LD+ + LGR+ L V VQVNT
Sbjct: 87 DVEWSVIGHLQTNKAKDVAEFAAEF---QALDNPRAAAALDRRLQALGRQ-LDVYVQVNT 142
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR---TLLNCRAE 148
SGEESK G+ P + ++ + L GLMTI + +++ PE R LL +
Sbjct: 143 SGEESKYGLAPDDVIPFLKTLPAYTA-LRVRGLMTIAV--FSTDPERVRPCFRLLRSLRD 199
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ L + ELSMGMSGD+E AI GST VR+G IFG R Q
Sbjct: 200 QARDLDLI-GPGELSMGMSGDYELAIAEGSTCVRVGQAIFGARPTPDSQ 247
>gi|325661586|ref|ZP_08150210.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|331084855|ref|ZP_08333943.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325472113|gb|EGC75327.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|330410949|gb|EGG90371.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 233
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ DKY LP+DI WH +GHLQ NK K L+G + V+ + + +
Sbjct: 56 KVQELTDKYEKLPKDISWHMIGHLQRNKVKYLIGKTTLIHSVDSLRLAEAIEAEAAKKNC 115
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
L + VL++VN +GEESK GI P L +VE + R +++ GLMTI P + E
Sbjct: 116 L----VDVLIEVNVAGEESKFGISPEEVLPLVEQI-ARFRHIKIKGLMTIA-PFVENPEE 169
Query: 138 NFRTLLNCRAEVCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
N N R D LSMGM+ D+E AIE G+T VR+G+ IFG R Y
Sbjct: 170 NRIHFANLRKLSVDIAAKNIDNVSMRILSMGMTNDYEVAIEEGATMVRVGTGIFGERNY 228
>gi|357042382|ref|ZP_09104088.1| YggS family pyridoxal phosphate enzyme [Prevotella histicola F0411]
gi|355369841|gb|EHG17232.1| YggS family pyridoxal phosphate enzyme [Prevotella histicola F0411]
Length = 223
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 12/171 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+GHLQ+NK K + P + M+E V + K+ ++K + R + VL++
Sbjct: 59 LPKDIEWHFIGHLQTNKVKYI---APYISMIEAVDSLKLLKEINKQAAKHNR-VINVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
++ + EESK G P +C ++E + N+ GLM M E R + A
Sbjct: 115 LHIAEEESKYGFSPDACRQLLEEGEWKNLRNVHIVGLMM--MASNVDDQEQIRREMTIAA 172
Query: 148 EV---CKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ KA A+D E S GMS D++ A+E ST VR+G+TIFGPR Y
Sbjct: 173 DLFDELKAKYFADDADFKERSWGMSHDYKIAVECRSTMVRVGTTIFGPRIY 223
>gi|160891909|ref|ZP_02072912.1| hypothetical protein BACUNI_04367 [Bacteroides uniformis ATCC 8492]
gi|156858387|gb|EDO51818.1| pyridoxal phosphate enzyme, YggS family [Bacteroides uniformis ATCC
8492]
Length = 221
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + VP + ++ G+ + K+ +DK + G K + L+
Sbjct: 56 SLPKDIEWHFIGHLQTNKIKYI---VPYVALIHGIDSYKLLAEVDKQAAKAG-KTVNCLL 111
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTPENFRT----L 142
Q++ + EE+K G C ++ R ++ GLM GM T E +T L
Sbjct: 112 QLHIAREETKFGFSFDECREMLAAGEWRELKHIRICGLM--GMATNTDNDEQIKTEFCSL 169
Query: 143 LNCRAEV-CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ EV K AE ELSMGMS D+ +AI GST +R+GS IFG R Y
Sbjct: 170 SSFFNEVKAKWFADAESFRELSMGMSHDYHEAIAAGSTLIRVGSKIFGERNY 221
>gi|373950376|ref|ZP_09610337.1| protein of unknown function UPF0001 [Shewanella baltica OS183]
gi|386323786|ref|YP_006019903.1| hypothetical protein [Shewanella baltica BA175]
gi|333817931|gb|AEG10597.1| protein of unknown function UPF0001 [Shewanella baltica BA175]
gi|373886976|gb|EHQ15868.1| protein of unknown function UPF0001 [Shewanella baltica OS183]
Length = 239
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 16/168 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
DI+WHF+G LQSNK + + D + V +KIA L D+ + PL V +Q+N
Sbjct: 82 DIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAEFA--PLNVCIQIN 136
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCR 146
S E++KSGID + L + E + + PNL GLM I P T+ E F L N
Sbjct: 137 ISAEDTKSGIDAAQMLPLAELI-AQLPNLALRGLMAI--PTATADTELQLKEFSMLNNLF 193
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
E+ + LSMGMS D + AI GST VRIGS IFG R YA
Sbjct: 194 QELKSHYPNVD---TLSMGMSNDLDAAISCGSTMVRIGSAIFGERNYA 238
>gi|422390731|ref|ZP_16470826.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL103PA1]
gi|422459585|ref|ZP_16536233.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL050PA2]
gi|422464821|ref|ZP_16541428.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL060PA1]
gi|422564818|ref|ZP_16640469.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL082PA2]
gi|422576004|ref|ZP_16651542.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL001PA1]
gi|314923046|gb|EFS86877.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL001PA1]
gi|314966818|gb|EFT10917.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL082PA2]
gi|315093262|gb|EFT65238.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL060PA1]
gi|315103480|gb|EFT75456.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL050PA2]
gi|327327644|gb|EGE69420.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL103PA1]
Length = 198
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQVN+S
Sbjct: 35 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQVNSS 90
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 91 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 149
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+
Sbjct: 150 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGTRD 191
>gi|91203601|emb|CAJ71254.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 243
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E ++WHF+GHLQ+NK K L M+ V +A LD + R L +LVQVN
Sbjct: 71 EKVEWHFIGHLQTNKVKDALKFAH---MIHSVDRLPLAEKLDHRLMQEVR-SLDILVQVN 126
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
TS EESK GI+P + +++ + + L GLMTIG+ +T R +C
Sbjct: 127 TSHEESKYGIEPEKAISLIKQI-AKYDTLNIRGLMTIGL--FTKDEVKIRKCFKVLKALC 183
Query: 151 KAL---GMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ G+ Q + LSMGM+ D++ AIE G+ VRIG+ IFG R
Sbjct: 184 DIIATEGIDRVQMDYLSMGMTNDYQIAIEEGANMVRIGTAIFGAR 228
>gi|399986403|ref|YP_006566752.1| alanine racemase [Mycobacterium smegmatis str. MC2 155]
gi|399230964|gb|AFP38457.1| Putative alanine racemase [Mycobacterium smegmatis str. MC2 155]
Length = 328
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++W +GHLQ+NKAK + + + N + A LD+ + LGR+ L V VQVNT
Sbjct: 163 DVEWSVIGHLQTNKAKDVAEFAAEF---QALDNPRAAAALDRRLQALGRQ-LDVYVQVNT 218
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT---LLNCRAE 148
SGEESK G+ P + ++ + L GLMTI + +++ PE R LL +
Sbjct: 219 SGEESKYGLAPDDVIPFLKTLPAYT-ALRVRGLMTIAV--FSTDPERVRPCFRLLRSLRD 275
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ L + ELSMGMSGD+E AI GST VR+G IFG R Q
Sbjct: 276 QARDLDLI-GPGELSMGMSGDYELAIAEGSTCVRVGQAIFGARPTPDSQ 323
>gi|346226130|ref|ZP_08847272.1| hypothetical protein AtheD1_13343 [Anaerophaga thermohalophila DSM
12881]
Length = 224
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ DKY LP+DI+WH +GHLQ NK K + P + ++ GV + ++ ++K +
Sbjct: 48 KVQELADKYEQLPKDIRWHMIGHLQRNKVKYI---APFVSLIHGVDSFRLLKTINKEAAK 104
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
R + L Q++ + EE+K G+D + I+E + N++ GLM GM +T
Sbjct: 105 NNR-IIPCLFQIHIADEETKFGLDENELFEILESADYKNLSNIQIKGLM--GMATFTDDR 161
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E FR L + ++D LSMGMSGD++ A+E GS VRIGS +FG R
Sbjct: 162 EKVRSEFRFLKTLFDKTKNNYFRSDDAFSILSMGMSGDYQIAVEEGSNMVRIGSAVFGER 221
Query: 192 EY 193
+Y
Sbjct: 222 QY 223
>gi|218262755|ref|ZP_03477113.1| hypothetical protein PRABACTJOHN_02792 [Parabacteroides johnsonii
DSM 18315]
gi|423341921|ref|ZP_17319636.1| YggS family pyridoxal phosphate enzyme [Parabacteroides johnsonii
CL02T12C29]
gi|218223157|gb|EEC95807.1| hypothetical protein PRABACTJOHN_02792 [Parabacteroides johnsonii
DSM 18315]
gi|409220014|gb|EKN12973.1| YggS family pyridoxal phosphate enzyme [Parabacteroides johnsonii
CL02T12C29]
Length = 222
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WHF+G LQSNK K + P + + + + K+ ++K + GR ++VL++
Sbjct: 58 LPSDIEWHFIGPLQSNKVKDI---APFIHTIHSIDSLKLLQEVNKQAAKHGRI-VRVLLE 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGM-PDYTSTPEN-FRTLLNC 145
++ + EE+K G P C ++ + PNL GLM + D TS ++ F +
Sbjct: 114 IHVAQEEAKHGFSPDECRELLHSLSPEALPNLRICGLMGMATNTDNTSQIQDEFHKIHKL 173
Query: 146 RAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ ++ ++ CELSMGMS D+ AI GST +RIG++IFG REY
Sbjct: 174 FTELKSSVFKGDEYFCELSMGMSHDYPIAIREGSTMIRIGTSIFGEREY 222
>gi|416059626|ref|ZP_11580724.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347999077|gb|EGY39955.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 169
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 10/173 (5%)
Query: 21 LRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L++ S +
Sbjct: 4 IQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLNEQRSP-HK 57
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPEN 138
PL VL+QVN S E SKSGI P L + +H+ P+L GLM I P D T +
Sbjct: 58 APLNVLIQVNISNEASKSGIQPGEILDLAKHLE-NLPHLCLRGLMAIPEPTNDVTRQEQV 116
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG R
Sbjct: 117 FYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGKR 168
>gi|167765522|ref|ZP_02437586.1| hypothetical protein CLOSS21_00016 [Clostridium sp. SS2/1]
gi|317498473|ref|ZP_07956767.1| alanine racemase domain-containing protein [Lachnospiraceae
bacterium 5_1_63FAA]
gi|429761449|ref|ZP_19293874.1| pyridoxal phosphate enzyme, YggS family [Anaerostipes hadrus DSM
3319]
gi|167712707|gb|EDS23286.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. SS2/1]
gi|291558990|emb|CBL37790.1| pyridoxal phosphate enzyme, YggS family [butyrate-producing
bacterium SSC/2]
gi|316894166|gb|EFV16354.1| alanine racemase domain-containing protein [Lachnospiraceae
bacterium 5_1_63FAA]
gi|429183702|gb|EKY24743.1| pyridoxal phosphate enzyme, YggS family [Anaerostipes hadrus DSM
3319]
Length = 231
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 11/174 (6%)
Query: 25 DKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
DKY N+ ++WH +GHLQ+NK K ++ V ++ V + K+A +DK + K +
Sbjct: 62 DKYANISWPVRWHLIGHLQTNKIKYIVDKVA---LIHSVDSIKLAQAIDKEAAKHDVKEV 118
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----F 139
+L+QVN + E++K G++P +V+ + +++ GLM I + PE+ F
Sbjct: 119 PILIQVNFAHEDTKFGLNPEDVFDVVKEISA-LEHVKIKGLMQIA--PFVDDPEDNRKYF 175
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R + ++ D LSMGM+ D+E A+E G+T VR+G+ IFG R Y
Sbjct: 176 RAMKQLSVDINNKNFDNVDMSILSMGMTNDYEIAVEEGATMVRVGTAIFGERNY 229
>gi|378823707|ref|ZP_09846307.1| pyridoxal phosphate enzyme, YggS family [Sutterella parvirubra YIT
11816]
gi|378597486|gb|EHY30774.1| pyridoxal phosphate enzyme, YggS family [Sutterella parvirubra YIT
11816]
Length = 226
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++W F+G LQ+NK++ + D VE V +IA L A G P+ V V+VN
Sbjct: 72 DLEWRFIGPLQANKSRIV---AERFDWVESVDRLRIAERL-SAQRPEGMPPINVTVEVNL 127
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
GE +KSG+ P ++ V PNL GLM I PD + PE + + E
Sbjct: 128 DGEATKSGVSPEELPAFMDAVAA-LPNLRLRGLMAIPSPD--AGPETYARMRRLWDE--- 181
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
A + LS GMS D E A+ GST VR+GS IFG R+Y K
Sbjct: 182 ARARRPELDTLSFGMSADIEPAVAAGSTQVRVGSAIFGARDYGK 225
>gi|367469631|ref|ZP_09469373.1| alanine racemase domain protein [Patulibacter sp. I11]
gi|365815308|gb|EHN10464.1| alanine racemase domain protein [Patulibacter sp. I11]
Length = 224
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 17/168 (10%)
Query: 23 FIDKYNLP--EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR 80
I+K P + ++W F+GHLQS K +L P++ + V ++ + L++ +L R
Sbjct: 71 LIEKVAQPGADRLRWEFIGHLQSRKVPEIL---PHVSRIHSVSSDSVLARLERH-RDLAR 126
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR 140
L VL++VN SGEE+KSGI P + ++E RCP + +GLMT MP + PE R
Sbjct: 127 PELDVLIEVNVSGEEAKSGIAPGALADVLE----RCP-VPVAGLMT--MPPFAEDPEQSR 179
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
E+ A G++ LSMG + D+E A+E G+T VR+GS +
Sbjct: 180 RWFAALRELAVAHGLS----VLSMGTTQDYEVAVEEGATVVRLGSVLL 223
>gi|402758921|ref|ZP_10861177.1| hypothetical protein ANCT7_14661 [Acinetobacter sp. NCTC 7422]
Length = 230
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+GH+Q NK K L D V GV IA L S+ +K L + +QVN
Sbjct: 73 EIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSSQRSD-QQKALNLCLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA--EV 149
G++SK G P +V+ + + P L GLM I PEN + +A E
Sbjct: 129 DGQDSKDGCQPEEVAELVQRIS-QLPKLRLRGLMVI------PAPENHAAFADAKALFEQ 181
Query: 150 CKALGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
KA + +D LSMGMS D + AI GST VRIG+ +FG RE KK+
Sbjct: 182 VKAQHVQPQDWDTLSMGMSADLDAAIAAGSTMVRIGTALFGAREALKKE 230
>gi|83589709|ref|YP_429718.1| hypothetical protein Moth_0858 [Moorella thermoacetica ATCC 39073]
gi|83572623|gb|ABC19175.1| Protein of unknown function UPF0001 [Moorella thermoacetica ATCC
39073]
Length = 236
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E + WH +GHLQ NK + + V ++ V + ++A ++K + GR+ + +L++VN
Sbjct: 70 EGVNWHLIGHLQRNKVRQVWDRVC---LIHSVDSLELAREINKRATAAGRR-VDILLEVN 125
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR----TLLNCR 146
+GEESK G+ P + + +V + P L GLMT+ + PE R L R
Sbjct: 126 IAGEESKFGLVPDAVIPLVREI-AGWPGLHICGLMTVA--PLVADPEEVRPVFLRLAALR 182
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
EV D LSMGM+ DFE AIE G+ VRIGS IFG R+Y K
Sbjct: 183 REVEALRLPGVDMAYLSMGMTNDFEVAIEAGANMVRIGSAIFGSRDYQTK 232
>gi|294673995|ref|YP_003574611.1| hypothetical protein PRU_1297 [Prevotella ruminicola 23]
gi|294472457|gb|ADE81846.1| conserved hypothetical protein TIGR00044 [Prevotella ruminicola 23]
Length = 224
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + P + M+E V + K+ ++K GR+ +KVL+
Sbjct: 59 SLPQDIEWHFIGHLQTNKVKYI---APYVTMIEAVDSLKLLREINKQAEKCGRR-IKVLL 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+++ + E +K G+ +C ++ R +++ GLM + + D + +T +
Sbjct: 115 ELHIAEEATKYGLTLDACRELLAAGEWREMQHVQICGLMMMASFVNDEAQIRQEMQTARD 174
Query: 145 CRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
EV KA A+D CE S GMS D+ A++ GST +R+G+ IFGPR Y
Sbjct: 175 FFDEV-KAQYFADDDAFCERSWGMSDDYPIALQTGSTMIRVGTKIFGPRVY 224
>gi|224024555|ref|ZP_03642921.1| hypothetical protein BACCOPRO_01281 [Bacteroides coprophilus DSM
18228]
gi|224017777|gb|EEF75789.1| hypothetical protein BACCOPRO_01281 [Bacteroides coprophilus DSM
18228]
Length = 222
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +KY LP+DI+WHF+GHLQ+NK K + P + M+ V + K+ ++K S
Sbjct: 47 KVQELTEKYQTLPKDIEWHFIGHLQTNKVKYI---APFISMIHAVDSFKLLEEINKQASK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGM--PDYTS 134
+ R + L++++ + EESK G SC +++ + N+ +G+M + D
Sbjct: 104 VNR-IIPCLLEIHIAQEESKYGFTFESCREMLQEGAWKNLKNISINGVMGMATNTEDSDE 162
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ F+ L + E+ + E Q CE+SMGMS D+ AIE GST VR+GS IFG R Y
Sbjct: 163 IRKEFKLLHDFFTELKQTYFPNEAQFCEISMGMSHDYPLAIEAGSTLVRVGSKIFGDRIY 222
>gi|260655189|ref|ZP_05860677.1| pyridoxal phosphate enzyme, YggS family [Jonquetella anthropi E3_33
E1]
gi|424845011|ref|ZP_18269622.1| pyridoxal phosphate enzyme, YggS family [Jonquetella anthropi DSM
22815]
gi|260630111|gb|EEX48305.1| pyridoxal phosphate enzyme, YggS family [Jonquetella anthropi E3_33
E1]
gi|363986449|gb|EHM13279.1| pyridoxal phosphate enzyme, YggS family [Jonquetella anthropi DSM
22815]
Length = 230
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 93/162 (57%), Gaps = 11/162 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG-RKPLKVLVQVNT 91
+KWH +G LQ NKA+ L ++ V+ V K+A L + LG R+P VL++VNT
Sbjct: 77 VKWHLIGQLQRNKARKALELFHSIQSVDSV---KLAQRLQDIAAELGVRRP--VLLEVNT 131
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAEV 149
S EESKSG + I+ ++C L++ GLMT+G D +F L +C +
Sbjct: 132 SLEESKSGCALADA-PIIADALVQCGRLDWQGLMTVGPLTDDKDQIRRSFAALRDCAEGL 190
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
K G++ LSMGMSGD+E AIE GST VR+G+ IFG R
Sbjct: 191 RKRTGLS--LPVLSMGMSGDYELAIEEGSTMVRVGTAIFGAR 230
>gi|329118482|ref|ZP_08247187.1| alanine racemase domain protein [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465423|gb|EGF11703.1| alanine racemase domain protein [Neisseria bacilliformis ATCC
BAA-1200]
Length = 238
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 13/184 (7%)
Query: 20 LLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLG 79
L + D +LP DI WH +G +QSNK K + V +G K A L A
Sbjct: 63 LAKADDLADLP-DIVWHIIGDVQSNKTKAV---AERAHWVHTIGRLKTAQRL-SAQRPSE 117
Query: 80 RKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPE 137
PL+V V+VN +GE +K G+ P+ + + V + PNL GLM + D + E
Sbjct: 118 MPPLQVCVEVNIAGEAAKHGVPPAEAVALACEV-AKLPNLRVRGLMCVAEAGADGAALAE 176
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY--AK 195
F T+ A++ A+G+A D LSMGMSGD+E A+ G+T VRIGS +FG R+Y A
Sbjct: 177 QFGTMQKLLADL-NAVGVAADV--LSMGMSGDWETAVACGATHVRIGSAVFGRRDYGAAA 233
Query: 196 KQQN 199
+Q++
Sbjct: 234 RQKS 237
>gi|148657357|ref|YP_001277562.1| alanine racemase domain-containing protein [Roseiflexus sp. RS-1]
gi|148569467|gb|ABQ91612.1| alanine racemase domain protein [Roseiflexus sp. RS-1]
Length = 244
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 24/182 (13%)
Query: 25 DKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP-- 82
++Y L WH +GHLQ+NKAK DMV V + ++A +++ + + R P
Sbjct: 72 ERYRL----TWHLIGHLQTNKAKK---AATLFDMVHSVDSLRLAQAINRYAAEVRRDPGR 124
Query: 83 -LKVLVQVNTSGEESKSGID-------PS---SCLGIVEHVRLRCPNLEFSGLMTIG--M 129
L +L+QVN SGE +KSG D P VE + L P+L+ GLMTI
Sbjct: 125 RLPILLQVNVSGEATKSGFDLYGWETQPDVYERFCADVEQI-LALPHLDVRGLMTIAPWA 183
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
PD + FR R + + +A + +LSMGM+ DFE AIE G+T VRIG IFG
Sbjct: 184 PDPEAARPVFRATRRLRDALAQRFPIAPWR-DLSMGMTDDFEVAIEEGATIVRIGRAIFG 242
Query: 190 PR 191
R
Sbjct: 243 ER 244
>gi|390454311|ref|ZP_10239839.1| alanine racemase domain-containing protein [Paenibacillus peoriae
KCTC 3763]
Length = 214
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVG-NEKIANHLDKAVSNLGRKPLKVLVQV 89
E +WHF+GHLQ+NK K +L + V+ + + + +HL K +K + +LVQV
Sbjct: 41 ERAEWHFIGHLQTNKVKDVLKYATCIHSVDRLKLGQALHSHLTKE-----KKKVDILVQV 95
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRA 147
NTS EESK G+ P L +++ + + L GLMTIG + FR L + +
Sbjct: 96 NTSYEESKFGVSPEEALILIQQLA-QLDTLRIKGLMTIGKLSANQDEVRSCFRLLKSIQQ 154
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+V + + LSMGMSGD E AIE G+T VR+G+ IFG R Y
Sbjct: 155 QVIQQDYPGVEMKVLSMGMSGDLEVAIEEGATMVRVGTAIFGERIY 200
>gi|422433133|ref|ZP_16510001.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL059PA2]
gi|422510705|ref|ZP_16586851.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL059PA1]
gi|313816052|gb|EFS53766.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL059PA1]
gi|315098477|gb|EFT70453.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL059PA2]
Length = 198
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NK K + ++ + KIA+ LDK + GR+ L+VLVQVN+S
Sbjct: 35 LEWSIIGGLQTNKVKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQVNSS 90
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 91 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 149
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 150 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAR 194
>gi|152978475|ref|YP_001344104.1| alanine racemase domain-containing protein [Actinobacillus
succinogenes 130Z]
gi|150840198|gb|ABR74169.1| alanine racemase domain protein [Actinobacillus succinogenes 130Z]
Length = 232
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F KY PE ++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 64 KIQFFAHKY--PE-LEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLNDQ-RPA 116
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPE 137
+ PL VL+Q+N S E SKSGI P + +H+ R P+L GLM I P D + E
Sbjct: 117 DKAPLNVLIQINISDESSKSGIQPQEMAALAKHIENR-PHLCLRGLMAIPAPTDDIAEQE 175
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
T + E + L LSMGM+ D A++ GST VRIG+ IFG R YA
Sbjct: 176 KALTAMKKLFEQLQTLCPNRPIDTLSMGMTNDMASAVKCGSTMVRIGTAIFGARNYA 232
>gi|336426846|ref|ZP_08606854.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010486|gb|EGN40469.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 231
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +DK LP+DI+WH +GHLQ NK K + V + M+ V + ++A + K
Sbjct: 56 KVQELVDKAEQLPDDIRWHMIGHLQRNKVKYI---VDKVYMIHSVDSLRLAEEISKEAVK 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
G + +L++VN +GEESK G+ P G+V+ + P + GLMTI P + +
Sbjct: 113 RG-IIVNILIEVNVAGEESKFGVTPEDTPGLVQEIS-HLPGILVRGLMTIA-PFVENAED 169
Query: 138 N---FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
N F L ++ LSMGM+GD+E AIE G++ VR+G+ IFG R Y
Sbjct: 170 NRIFFSALKKLYVDITNKNIDNVRMDYLSMGMTGDYEVAIEEGASFVRVGTGIFGERSY 228
>gi|347531809|ref|YP_004838572.1| hypothetical protein RHOM_07635 [Roseburia hominis A2-183]
gi|345501957|gb|AEN96640.1| hypothetical protein RHOM_07635 [Roseburia hominis A2-183]
Length = 235
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP DI+WH +GHLQ NK K ++G V ++ V ++A ++ G + +LV+
Sbjct: 67 LPSDIRWHMIGHLQRNKVKYIVGKVA---LIHSVDTYRLAEEINIQAKKRG-IIVPILVE 122
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLN 144
VN +GEE+K G + +VE + + N+ GLMTI + PE+ FR +
Sbjct: 123 VNIAGEETKFGTTAEDAMLLVEEIS-KLENVRIKGLMTIA--PFVENPEDNRLYFRKIKQ 179
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
++ LSMGM+GD+E AIE G+T VR+G+ IFG R Y K ++
Sbjct: 180 LSVDITNKNIDNVSMEILSMGMTGDYEVAIEEGATMVRVGTGIFGARNYKKSNES 234
>gi|359429110|ref|ZP_09220138.1| hypothetical protein ACT4_021_02930 [Acinetobacter sp. NBRC 100985]
gi|358235691|dbj|GAB01677.1| hypothetical protein ACT4_021_02930 [Acinetobacter sp. NBRC 100985]
Length = 225
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+GH+Q NK K L D V GV IA L + PL + +QVN
Sbjct: 73 EIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSSQRLE-SQTPLNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G++SK G P + +V+ + R PN+ GLM I P+ + + + L +V
Sbjct: 129 DGQDSKDGCQPEEVIELVKQIS-RLPNIRLRGLMVIPAPENHAAFADAKVLFE---QVKS 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++D LSMGMS D + AI GST VRIG+ +FG R
Sbjct: 185 QHAQSQDWDTLSMGMSADLDAAIAAGSTMVRIGTALFGKR 224
>gi|372221860|ref|ZP_09500281.1| hypothetical protein MzeaS_06066 [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 219
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 20/174 (11%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI WH +GH+Q NK K + P + ++ GV + K+ +DK R + L+Q
Sbjct: 58 LPKDISWHMIGHVQRNKVKYM---APYVSLIHGVDSFKLLKEIDKQAQKNNRN-IACLLQ 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTP-------ENFR 140
++ + E +K G+D ++ + N+ GLM GM +T +N R
Sbjct: 114 MHIAEESTKFGLDSEELFAMLNDTNFKALDNITIKGLM--GMATFTDDEAQIRKEFQNLR 171
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L N E+ +L + LSMGMSGD++ AIE GST VRIGS+IFG R Y+
Sbjct: 172 QLYNKAKELVPSLEV------LSMGMSGDYKIAIEEGSTMVRIGSSIFGARNYS 219
>gi|449129371|ref|ZP_21765602.1| YggS family pyridoxal phosphate enzyme [Treponema denticola SP37]
gi|448946213|gb|EMB27078.1| YggS family pyridoxal phosphate enzyme [Treponema denticola SP37]
Length = 246
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 19 KLLRFIDKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ +KY +K HF+GHLQ+NK K + + D +E V +A L K +
Sbjct: 59 KVQELCEKYEPLSSVKHETHFIGHLQTNKIKDV---IKYADCIESVDRLDLAEKLSKRLE 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
+ G K + +L+QVNTS EESK G P L + E + + P L+ GLMTIG+ D
Sbjct: 116 SEG-KTMDILIQVNTSQEESKFGCKPEEALTLTEKI-AKLPCLKIKGLMTIGLFSDDMDK 173
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F+ L R E+ + +SMGM+GD E AIE GST +R+G+ IFG R Y
Sbjct: 174 VRLCFKLLQKIRKEITEKNIPNVSMEVVSMGMTGDLEVAIEEGSTLIRVGTAIFGKRNY 232
>gi|317480381|ref|ZP_07939481.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 4_1_36]
gi|316903459|gb|EFV25313.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 4_1_36]
Length = 221
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQ+NK K + VP + ++ G+ + K+ +DK + G K + L+
Sbjct: 56 SLPKDIEWHFIGHLQTNKIKYI---VPYVALIHGIDSYKLLAEVDKQAAKAG-KTVNCLL 111
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTPENFRT----L 142
Q++ + EE+K G C ++ R ++ GLM GM T E +T L
Sbjct: 112 QLHIAREETKFGFSFDECREMLAAGEWRELKHIRICGLM--GMATNTDNDEQIKTEFCSL 169
Query: 143 LNCRAEV-CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ EV K AE ELSMGMS D+ +AI GST +R+GS IFG R Y
Sbjct: 170 SSFFNEVKAKWFADAESFRELSMGMSHDYHEAIAAGSTLIRVGSKIFGERNY 221
>gi|53804165|ref|YP_113991.1| hypothetical protein MCA1536 [Methylococcus capsulatus str. Bath]
gi|53757926|gb|AAU92217.1| conserved hypothetical protein TIGR00044 [Methylococcus capsulatus
str. Bath]
Length = 229
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G +QSNK + L D V + KIA L+ GR PL V +QVN
Sbjct: 73 DIVWHFIGPIQSNKTRLL---AERFDWVHSIDRLKIAQRLNDQRPP-GRAPLNVCIQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
GE +KSG+ P++ + + V P L GLM I P T+ R E+ +
Sbjct: 129 GGEPTKSGVTPAAVAELAQAVAA-LPRLRLRGLMAIPAP--TADEREQRAAFRRLRELLE 185
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
LGM LSMGMS D E A+ G+T VR+G+ IFG R AK
Sbjct: 186 GLGMPGLDT-LSMGMSDDLEAAVAEGTTLVRVGTAIFGRRPPAK 228
>gi|56461074|ref|YP_156355.1| TIM-barrel fold family protein [Idiomarina loihiensis L2TR]
gi|56180084|gb|AAV82806.1| Predicted enzyme with a TIM-barrel fold [Idiomarina loihiensis
L2TR]
Length = 240
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 9/162 (5%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+G +QSNK K + + D V+ V EKIA L++ + ++ L +L+QVN
Sbjct: 85 VQWHFIGPVQSNKTKDI---AQHFDWVQSVEREKIARRLNEQRPDDSQQ-LNLLLQVNID 140
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP--ENFRTLLNCRAEVC 150
+++KSG+ P + E+V + CP L+ GLMTI T ++F+ + ++
Sbjct: 141 DDDNKSGLAPEQVEALAEYV-MNCPKLKLRGLMTILKAGTTEDEREKSFQQMYKLYQQLQ 199
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ G D LSMGMSGD QA+ G+ VRIG+ IFG RE
Sbjct: 200 QTYGEQID--TLSMGMSGDMRQAVLEGANMVRIGTAIFGERE 239
>gi|333382096|ref|ZP_08473773.1| YggS family pyridoxal phosphate enzyme [Dysgonomonas gadei ATCC
BAA-286]
gi|332829127|gb|EGK01791.1| YggS family pyridoxal phosphate enzyme [Dysgonomonas gadei ATCC
BAA-286]
Length = 222
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 101/170 (59%), Gaps = 10/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+GHLQ+NK K++ +P + V + ++ + ++K+ + +G++ + L++
Sbjct: 58 LPQDIEWHFIGHLQTNKVKSI---IPYTHTIHSVDSWRLLSEIEKSAARIGKR-ICCLLE 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIG--MPDYTSTPENFRTLLNC 145
++ + E++K G C + + R C G+M + + + + + F++L
Sbjct: 114 IHIAQEDAKFGFSFDECRSFLSGNQWRECKFAYIGGVMGMASNIEEESQIRKEFKSLKLF 173
Query: 146 RAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ K AED C E+SMGMSGD+ A+E GST +R+GS+IFG REY
Sbjct: 174 FDEI-KNDYFAEDDCFSEISMGMSGDYTIAVEEGSTMIRVGSSIFGEREY 222
>gi|83721068|ref|YP_441835.1| hypothetical protein BTH_I1288 [Burkholderia thailandensis E264]
gi|167580664|ref|ZP_02373538.1| hypothetical protein BthaT_21093 [Burkholderia thailandensis TXDOH]
gi|167618767|ref|ZP_02387398.1| hypothetical protein BthaB_20827 [Burkholderia thailandensis Bt4]
gi|257138004|ref|ZP_05586266.1| hypothetical protein BthaA_02119 [Burkholderia thailandensis E264]
gi|83654893|gb|ABC38956.1| conserved hypothetical protein TIGR00044 [Burkholderia
thailandensis E264]
Length = 232
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVL 86
+L +++WHF+G LQSNK + + D V + KIA L ++ ++L PL V
Sbjct: 71 DLRAELEWHFIGPLQSNKTRPV---AERFDWVHTIDRLKIAQRLAEQRPAHL--PPLNVC 125
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT---LL 143
VQVN SGE SKSG+ PS + + P L GLM I P+ + PE R L
Sbjct: 126 VQVNISGEASKSGVAPSDAAELARAIAA-LPALRLRGLMAI--PEPAADPEAKRAPHRAL 182
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ E +A G+A D LSMGMS D E A+ G+T VRIG+ IFG R+YA
Sbjct: 183 HALFEQLRADGLALDT--LSMGMSDDLEAAVAEGATIVRIGTAIFGARDYA 231
>gi|359782691|ref|ZP_09285911.1| alanine racemase domain-containing protein [Pseudomonas
psychrotolerans L19]
gi|359369511|gb|EHK70082.1| alanine racemase domain-containing protein [Pseudomonas
psychrotolerans L19]
Length = 231
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK + + + D V V KIA L + R PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTRAIAS---HFDWVHSVDRLKIAQRLAEQRPP-ERGPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALG 154
SKSG P + V R PNL GLM I P+ T P + R + +AL
Sbjct: 132 ASKSGCHPDELPALAAAVS-RLPNLRLRGLMAI--PEPTDDPASQRVAFARLRTLSEALN 188
Query: 155 MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ D LSMGMS D E AI G+T VR+G+ +FG R+Y
Sbjct: 189 LGLDT--LSMGMSQDLEAAIAEGATWVRVGTALFGARDY 225
>gi|424911479|ref|ZP_18334856.1| pyridoxal phosphate enzyme, YggS family [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392847510|gb|EJB00033.1| pyridoxal phosphate enzyme, YggS family [Rhizobium leguminosarum
bv. viciae USDA 2370]
Length = 219
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+ H +G LQSNKA V D+VE V EKIA L + GRK L+ VQVNT
Sbjct: 75 IELHLIGPLQSNKAAD---AVALFDVVESVDREKIARALAEECGKQGRK-LRFYVQVNTG 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKA 152
E K+GIDP + V R L GLM I D P +F L A++ K
Sbjct: 131 LEPQKAGIDPRETIAFVAFCRDEL-KLLVEGLMCIPPADENPGP-HFALL----AKLAKQ 184
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G+ + LSMGMSGDFE A+E G+TSVR+GS IFG R
Sbjct: 185 CGLEK----LSMGMSGDFETAVEFGATSVRVGSAIFGTR 219
>gi|374308768|ref|YP_005055199.1| pyridoxal phosphate enzyme, YggS family [Filifactor alocis ATCC
35896]
gi|291167100|gb|EFE29146.1| pyridoxal phosphate enzyme, YggS family [Filifactor alocis ATCC
35896]
Length = 230
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ + KY P+ +KWH +G LQSNK K ++ V +M+ + +A +D+
Sbjct: 56 KVQEILSKYEKFPDTVKWHLIGTLQSNKVKYIIDKV---EMIHSLDRISLAKEIDRRAKE 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+G +K L+QVN S EESK G+D + L +E V +++ GLM GM + E
Sbjct: 113 IGV-VMKCLIQVNISQEESKHGLDKAEALKFIEEVAQNFSHIQVLGLM--GMAPFVEDAE 169
Query: 138 N----FRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
FR L E K L + Q + LSMGM+ D+ AIE GS VR+G+ IFG R
Sbjct: 170 EARPYFRQLKGLFEE-AKNLNLGTGQMKYLSMGMTNDYTVAIEEGSNMVRVGTGIFGKRN 228
Query: 193 Y 193
Y
Sbjct: 229 Y 229
>gi|149195666|ref|ZP_01872723.1| hypothetical protein LNTAR_17278 [Lentisphaera araneosa HTCC2155]
gi|149141128|gb|EDM29524.1| hypothetical protein LNTAR_17278 [Lentisphaera araneosa HTCC2155]
Length = 464
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI WH +G LQSNK + V + V N +A +D+ G K + + +
Sbjct: 303 SLPQDIHWHLIGPLQSNKVRQ---AVKVAKTIHSVDNTSLAKRIDRIAEEEG-KQIDIFI 358
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCP---NLEFSGLMTIGMPDYTSTPENFRTLLN 144
Q+N +GE KSGI S +E + + C N+ GLMT+G P S EN +
Sbjct: 359 QLNLTGEIQKSGISTLS----LEKLLISCSELKNINLIGLMTMG-PLSASKEENLKVFKE 413
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + + E+ +LSMGMSGDF++AIE GS +RIGS I G R Y
Sbjct: 414 LKEQSVEHSKYFENDVKLSMGMSGDFDEAIECGSHILRIGSAIMGTRTY 462
>gi|32267181|ref|NP_861213.1| hypothetical protein HH1682 [Helicobacter hepaticus ATCC 51449]
gi|32263234|gb|AAP78279.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 222
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 14/163 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP ++WHF+G+LQ NK TLL P L + + + K+A L K LG + ++ L+
Sbjct: 68 DLP--LEWHFIGNLQENKINTLLSLNPTL--LHSLDSIKLALALQK---RLGEQKIRALL 120
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNC 145
QVN + EESKSG+ S I EH+ CPN++ G+M+IG D +FR
Sbjct: 121 QVNAANEESKSGVSVESAKEIYEHICATCPNIKLEGIMSIGAHSDDRALIERSFR----L 176
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
+V +L + + LSMGMSGDFE AI G+ VRIGS +F
Sbjct: 177 TRDVFDSLKGSGAKI-LSMGMSGDFEIAIAYGANLVRIGSKLF 218
>gi|365959436|ref|YP_004941003.1| alanine racemase [Flavobacterium columnare ATCC 49512]
gi|365736117|gb|AEW85210.1| alanine racemase [Flavobacterium columnare ATCC 49512]
Length = 244
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 8/161 (4%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
HF+GHLQ+NK K LL N+ ++ + +A L + + L K + VL+QVNTS E+
Sbjct: 78 HFIGHLQTNKIKDLLK--YNVSCIQSLDRLDLAEKLHQRLQ-LENKSIDVLIQVNTSKEK 134
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVCKAL 153
SK GIDP+ ++ V + L+ GLMTIG+ + E F L N + ++ + L
Sbjct: 135 SKFGIDPNDVSNFIKEVA-QFNTLKIKGLMTIGLFSAETNKVKECFCLLKNIQEQI-RTL 192
Query: 154 GMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + ELSMGMSGD E AIE G+T +RIG+ IFG R Y
Sbjct: 193 NIPNVEMQELSMGMSGDLEIAIEEGATIIRIGTAIFGQRLY 233
>gi|444376418|ref|ZP_21175662.1| putative protein YggS [Enterovibrio sp. AK16]
gi|443679396|gb|ELT86052.1| putative protein YggS [Enterovibrio sp. AK16]
Length = 234
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 14/170 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
+++WHF+G +QSNK + + + D V + KIA L D+ L PL+VL+QVN
Sbjct: 75 NLEWHFIGPIQSNKTRPI---AEHFDWVHSIDRSKIAQRLSDQRPDELA--PLQVLIQVN 129
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAE 148
TSGE SKSG + + + PNL GLM I P D+ E F L +
Sbjct: 130 TSGETSKSGTGFEEVKALADEIDA-LPNLALRGLMCIPQPEDDHQKQLEAFAPL----SA 184
Query: 149 VCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ + + Q + LSMGMSGD + AI GST VRIG+ IFG R+Y+ ++
Sbjct: 185 LFEEMKAGRPQFDTLSMGMSGDMDAAIASGSTMVRIGTAIFGARDYSNRK 234
>gi|295109994|emb|CBL23947.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus obeum A2-162]
Length = 230
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 12/181 (6%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +DK LP DI+WH +GHLQ NK K ++ V ++ V + ++A ++ +
Sbjct: 56 KVQEIMDKVPQLPSDIRWHMIGHLQRNKVKYIVDKVA---LIHSVDSLRLAETIEHEAAK 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+ VL++VN + EESK G+ L +VE V P++ GLMTI Y PE
Sbjct: 113 -HSVTVPVLIEVNVAQEESKFGLKTEEVLSLVESV-ASFPHIHIEGLMTIA--PYVEDPE 168
Query: 138 N----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
FR L ++ + LSMGM+GD++ A++ G+T VR+G+ IFG R Y
Sbjct: 169 ENRGIFRQLKKLSVDIAAKNINNVNMSVLSMGMTGDYQVAVQEGATMVRVGTGIFGERNY 228
Query: 194 A 194
A
Sbjct: 229 A 229
>gi|422349735|ref|ZP_16430624.1| YggS family pyridoxal phosphate enzyme [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657944|gb|EKB30824.1| YggS family pyridoxal phosphate enzyme [Sutterella wadsworthensis
2_1_59BFAA]
Length = 242
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 30 PEDI-KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
PED +WHF+G LQ+NK + + + D V+ V +IA+ L A G PL +L++
Sbjct: 78 PEDPGEWHFIGPLQANKTRLV---AEHFDWVQSVDRLRIASRLS-AQRPAGMPPLNILIE 133
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAE 148
VN GEE+KSG+ PS + + P L GLM I P S R L RA
Sbjct: 134 VNIDGEETKSGVAPSEVEAFADEI-AGYPGLRLRGLMAIPAPAADSESRR-RPLAAMRAL 191
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
+ LSMGMS D ++A+ G+T VR+G +FGPR+Y+ K
Sbjct: 192 FERLRVKHPGMDTLSMGMSADMDEAVSEGATMVRVGRAVFGPRDYSAK 239
>gi|120603948|ref|YP_968348.1| alanine racemase [Desulfovibrio vulgaris DP4]
gi|304569675|ref|YP_009276.2| hypothetical protein DVU0051 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120564177|gb|ABM29921.1| alanine racemase domain protein [Desulfovibrio vulgaris DP4]
Length = 242
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PL--KVL 86
EDI WH +GH+QS KAK + G ++ V +EK+A++L KA+ P+ VL
Sbjct: 78 EDILWHCIGHVQSRKAKDVAG---RFALIHTVDSEKLAHNLHKALWRPEDDTCPVVQDVL 134
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+QVN E KSGID + + E V L+ P L GLM + D + F L
Sbjct: 135 LQVNIGEEVQKSGIDAAETARLAETV-LQLPTLRLCGLMCLPPFFDDGEAARPFFAALRK 193
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++ +LG+ LSMGMSGDFEQA+E G+T VR+G+ IFGPR
Sbjct: 194 LRDDLELSLGVPLPH--LSMGMSGDFEQAVEEGATIVRVGTDIFGPR 238
>gi|46447879|gb|AAS94535.1| conserved hypothetical protein TIGR00044 [Desulfovibrio vulgaris
str. Hildenborough]
Length = 237
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PL--KVL 86
EDI WH +GH+QS KAK + G ++ V +EK+A++L KA+ P+ VL
Sbjct: 73 EDILWHCIGHVQSRKAKDVAG---RFALIHTVDSEKLAHNLHKALWRPEDDTCPVVQDVL 129
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+QVN E KSGID + + E V L+ P L GLM + D + F L
Sbjct: 130 LQVNIGEEVQKSGIDAAETARLAETV-LQLPTLRLCGLMCLPPFFDDGEAARPFFAALRK 188
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++ +LG+ LSMGMSGDFEQA+E G+T VR+G+ IFGPR
Sbjct: 189 LRDDLELSLGVPLPH--LSMGMSGDFEQAVEEGATIVRVGTDIFGPR 233
>gi|429748869|ref|ZP_19282027.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 332 str. F0381]
gi|429169559|gb|EKY11306.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 332 str. F0381]
Length = 247
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 19 KLLRFIDKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ +KY +D HF+GHLQ+NK K +L + VE V +A L ++
Sbjct: 58 KVQELKEKYEALKDTPHTNHFIGHLQTNKIKEILRY--EVSCVESVDRLDLAQKLHTRLA 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
GR+ + + +QVNTSGEESK G P L +V+ V + P L GLMTIG+ +++
Sbjct: 116 AEGRE-MDIFIQVNTSGEESKFGAHPDEVLTLVQQV-AQLPTLHIKGLMTIGL--FSAET 171
Query: 137 ENFRT---LLNCRAEVCKALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
E R LL + AL + ELSMGMS D E AIE G+T VR+G+ IFG R
Sbjct: 172 EKVRVCFQLLKRLQQDIFALQLPNVAPHELSMGMSNDLETAIEEGATIVRVGTAIFGQRI 231
Query: 193 Y 193
Y
Sbjct: 232 Y 232
>gi|387151952|ref|YP_005700888.1| alanine racemase [Desulfovibrio vulgaris RCH1]
gi|311232396|gb|ADP85250.1| alanine racemase domain protein [Desulfovibrio vulgaris RCH1]
Length = 243
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK--PL--KVL 86
EDI WH +GH+QS KAK + G ++ V +EK+A++L KA+ P+ VL
Sbjct: 79 EDILWHCIGHVQSRKAKDVAG---RFALIHTVDSEKLAHNLHKALWRPEDDTCPVVQDVL 135
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+QVN E KSGID + + E V L+ P L GLM + D + F L
Sbjct: 136 LQVNIGEEVQKSGIDAAETARLAETV-LQLPTLRLCGLMCLPPFFDDGEAARPFFAALRK 194
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++ +LG+ LSMGMSGDFEQA+E G+T VR+G+ IFGPR
Sbjct: 195 LRDDLELSLGVPLPH--LSMGMSGDFEQAVEEGATIVRVGTDIFGPR 239
>gi|437999594|ref|YP_007183327.1| alanine racemase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451813215|ref|YP_007449668.1| type III eyridoxal 5-phosphate-dependent enzyme [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429338828|gb|AFZ83250.1| alanine racemase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451779184|gb|AGF50064.1| type III eyridoxal 5-phosphate-dependent enzyme [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 235
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 97/177 (54%), Gaps = 17/177 (9%)
Query: 25 DKYNL-PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPL 83
+KYN+ +DIKW +G+LQ NKAK + +D +E + +A LDK + L +K L
Sbjct: 67 EKYNIINKDIKWVMIGNLQMNKAKE---AINYIDELESLDRLDLALVLDKHLK-LEKKSL 122
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLL 143
K LVQV TS E K G++P + + + V +LE GLMTI ++ + +
Sbjct: 123 KTLVQVKTSSEPQKHGLNPENLIDFIGKVSENYKSLEIIGLMTIA-----ENSKDNKIVR 177
Query: 144 NCRAEVCKALGMAEDQC-------ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
NC + K + +Q +LSMGMS DFE AIE G+T VR+GS IFG R Y
Sbjct: 178 NCFNVLYKLMRKVNEQKISGVNLKKLSMGMSDDFEIAIEEGATEVRLGSIIFGKRIY 234
>gi|217972518|ref|YP_002357269.1| alanine racemase domain-containing protein [Shewanella baltica
OS223]
gi|217497653|gb|ACK45846.1| alanine racemase domain protein [Shewanella baltica OS223]
Length = 239
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 90/168 (53%), Gaps = 16/168 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
DI+WHF+G LQSNK + + D + V +KIA L ++ + L PL + +Q+N
Sbjct: 82 DIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNEQRPAELA--PLNICIQIN 136
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCR 146
S E++KSGID + L + E + + PNL GLM I P T+ E F L N
Sbjct: 137 ISAEDTKSGIDAAQMLPLAELIA-QLPNLALRGLMAI--PTATADTELQLKEFSMLNNLF 193
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
E+ + LSMGMS D + AI GST VRIGS IFG R YA
Sbjct: 194 QELKSHYPSVD---TLSMGMSNDLDAAISCGSTMVRIGSAIFGERNYA 238
>gi|410667632|ref|YP_006920003.1| pyridoxal phosphate-dependent enzyme [Thermacetogenium phaeum DSM
12270]
gi|409105379|gb|AFV11504.1| pyridoxal phosphate-dependent enzyme [Thermacetogenium phaeum DSM
12270]
Length = 230
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 13/175 (7%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
++ F+ KY + + +WH +GHLQSNKAK L+G V + ++ + K+ + L A
Sbjct: 59 RVQEFLKKYEAIGKAAEWHLIGHLQSNKAKYLVGKVALIHSLDSLKLAKLLDKLSVAHG- 117
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
P +VLVQVN SGE++K G+ P G ++ V+ P +E GLMT M Y PE
Sbjct: 118 ---APWRVLVQVNVSGEKTKFGLSPEEVPGFLDAVQ-DLPGIEICGLMT--MAPYEEDPE 171
Query: 138 N----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
FR+L R E+ ++ + LSMGM+ DFE A+E G+T VRIGS +F
Sbjct: 172 RTRPVFRSLRQLRDEMARSRHYLNLE-HLSMGMTNDFEVAVEEGATMVRIGSALF 225
>gi|386391095|ref|ZP_10075876.1| pyridoxal phosphate enzyme, YggS family [Desulfovibrio sp. U5L]
gi|385731973|gb|EIG52171.1| pyridoxal phosphate enzyme, YggS family [Desulfovibrio sp. U5L]
Length = 228
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 30 PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
P + WHF+GHLQ NK K +G ++ + N ++A L K G P V +QV
Sbjct: 69 PAGLTWHFIGHLQRNKGKLAIG---RFALIHTLDNLELARLLQKKTGEQGLAPQAVCLQV 125
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNC 145
N +GE KSG+ P + E V P L SGLM +P P+ F L
Sbjct: 126 NVAGEAQKSGVSPEGLPALAEAVAA-MPELALSGLMV--LPPVFDDPDGARPAFARLREL 182
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
R + LG+ LSMGMSGD E AI G+T VR+G+ +FGPR+
Sbjct: 183 RDGLAARLGLPLPV--LSMGMSGDLEAAILEGATHVRVGTDLFGPRQ 227
>gi|386314528|ref|YP_006010693.1| PLP-dependent amino acid racemase, YggS [Shewanella putrefaciens
200]
gi|319427153|gb|ADV55227.1| PLP-dependent amino acid racemase, YggS [Shewanella putrefaciens
200]
Length = 239
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
N P DI+WHF+G LQSNK + + D + V +KIA L++ PL V +
Sbjct: 79 NYP-DIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIALRLNEQRPT-SMAPLNVCI 133
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST--PENFRTLLNC 145
Q+N S E++KSGID + + + E + + PNL+ GLM I ST + F L
Sbjct: 134 QINISDEDTKSGIDANQMMPLAELIS-QLPNLKLRGLMAIPTATDNSTLQRQEFTKLKQL 192
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+ + D LSMGMS D + AI GST VRIGS IFG R YA+
Sbjct: 193 FDELKQHYA---DVDTLSMGMSNDLDTAIACGSTMVRIGSAIFGERHYAE 239
>gi|372487289|ref|YP_005026854.1| pyridoxal phosphate enzyme, YggS family [Dechlorosoma suillum PS]
gi|359353842|gb|AEV25013.1| pyridoxal phosphate enzyme, YggS family [Dechlorosoma suillum PS]
Length = 234
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 12/167 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
D++WHF+G LQSNK + + D V + KIA L ++ + L PL+V VQVN
Sbjct: 76 DLEWHFIGPLQSNKTRPV---AERFDWVHSIDRLKIAQRLSEQRPAEL--PPLQVCVQVN 130
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAE 148
SGE SKSG D + V PNL GLM I P D + E R L E
Sbjct: 131 ISGEASKSGCDLDQAAELCRAVAA-LPNLTLRGLMAIPAPAEDEAAQREPCRRLRQFY-E 188
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+A G+A D LSMGMS D E A+ G+T VR+G+ IFG R+Y+K
Sbjct: 189 QLRAEGLALDT--LSMGMSHDLEAAVAEGATIVRVGTAIFGARDYSK 233
>gi|312143931|ref|YP_003995377.1| alanine racemase [Halanaerobium hydrogeniformans]
gi|311904582|gb|ADQ15023.1| alanine racemase domain protein [Halanaerobium hydrogeniformans]
Length = 234
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 18/168 (10%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I WHFVGHLQ NK K L+ + N M+E V + ++A ++K R + VL+Q+N +
Sbjct: 78 IDWHFVGHLQRNKVKYLMR-MENCKMIESVDSFRLAKEVNKRARKNDR-IIPVLIQINIA 135
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR-------TLLNC 145
+++K GI + + + ++ NLE GLMTI +P Y E R L +
Sbjct: 136 EDDNKYGIKAENAEDFFKKI-IKFKNLEIKGLMTI-LP-YLDDEETLRKYFKELKNLFDY 192
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+E K L ELSMGM+ D++ AIE G+T VRIG +FG REY
Sbjct: 193 LSENIKVL------TELSMGMTNDYQIAIEEGATIVRIGRALFGEREY 234
>gi|91976780|ref|YP_569439.1| hypothetical protein RPD_2306 [Rhodopseudomonas palustris BisB5]
gi|91683236|gb|ABE39538.1| Protein of unknown function UPF0001 [Rhodopseudomonas palustris
BisB5]
Length = 271
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 19 KLLRFIDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
KL DK+ + D I+W +GHLQ+NK K L+ ++ + ++A+ L++ +
Sbjct: 79 KLQEARDKFAILGDLPIRWSIIGHLQTNKVKYLVRFASEFHALDSL---RLADELNRRLE 135
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
GR L V VQVNTSGE SK G+ P+ + +E + P L+ GLMT+ + D
Sbjct: 136 AEGRD-LDVFVQVNTSGEASKYGLHPNDVIAFIERLP-EFPRLKPRGLMTLAIFSADTAR 193
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
FR L + R +A+ + +LSMGMSGDFE AIE G+ VR+G IFG R
Sbjct: 194 VRACFRLLRDLRD---RAVPIHPGLTQLSMGMSGDFEVAIEEGANVVRVGQAIFGAR 247
>gi|152980093|ref|YP_001352031.1| hypothetical protein mma_0341 [Janthinobacterium sp. Marseille]
gi|151280170|gb|ABR88580.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 234
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 92/167 (55%), Gaps = 14/167 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
++WHF+G +QSNK + + N D V V EKIA L ++ ++L PL + +QVN
Sbjct: 78 LEWHFIGPIQSNKTRPI---AENFDWVHSVDREKIAQRLSEQRPAHL--PPLNICLQVNI 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT---LLNCRAE 148
SGE SKSG+ PS L V P L GLM I P+ E R ++ E
Sbjct: 133 SGEASKSGVLPSEAL-AVAQAIAALPRLCLRGLMAI--PEAVGDAEQQRAPFRQMHALLE 189
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+A G+ D LSMGMSGD + AI G+T VRIGS IFG REYAK
Sbjct: 190 QLRAEGLKLDT--LSMGMSGDMDAAIAEGATIVRIGSAIFGTREYAK 234
>gi|114705826|ref|ZP_01438729.1| hypothetical protein FP2506_15209 [Fulvimarina pelagi HTCC2506]
gi|114538672|gb|EAU41793.1| hypothetical protein FP2506_15209 [Fulvimarina pelagi HTCC2506]
Length = 224
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ VG LQSNK V D++E V EKIA + K V GR P ++ VQVNT
Sbjct: 74 DIELRLVGPLQSNKTGD---AVALFDVIESVDREKIARAIAKEVEKQGRNP-RLYVQVNT 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
EE K+GI P + VE R L GLM I P P LL A++
Sbjct: 130 GEEEQKAGILPKEAVAFVERCRSEH-GLTIEGLMCI--PPVDENPGPHFALL---AKLAG 183
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
G+ + LSMGMSGD+E AI+ G+TSVR+GS IFG R+Y+
Sbjct: 184 EAGVEK----LSMGMSGDYETAIQFGATSVRVGSAIFGERDYS 222
>gi|392391413|ref|YP_006428016.1| pyridoxal phosphate enzyme, YggS family [Ornithobacterium
rhinotracheale DSM 15997]
gi|390522491|gb|AFL98222.1| pyridoxal phosphate enzyme, YggS family [Ornithobacterium
rhinotracheale DSM 15997]
Length = 217
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 15/180 (8%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +KY +LP+DI+WH +G LQSNK K + V ++ GV + + +DK +
Sbjct: 47 KIQEMCEKYESLPKDIRWHMIGALQSNKVKHMAEFV---HLIHGVHKKSLLKEIDKRAAQ 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYT---- 133
GR +VL++V + E+SK G+ S I+E + PN++ +GLM GM +T
Sbjct: 104 AGRVQ-EVLLEVKIAEEDSKHGMTRQSAREILE-TQADFPNVKIAGLM--GMATFTDDES 159
Query: 134 STPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E F+ L ++ K + LSMGMSGD+ A+E GST VR+GS IFG R Y
Sbjct: 160 QVTEEFKELHQIFVDLQKDFPQLQI---LSMGMSGDYLIAVEQGSTMVRVGSKIFGERNY 216
>gi|195953925|ref|YP_002122215.1| alanine racemase domain-containing protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195933537|gb|ACG58237.1| alanine racemase domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 224
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 19/182 (10%)
Query: 19 KLLRFIDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ F+ KY +D I+WHF+G +Q+NK K L V ++ V + I + + K +
Sbjct: 56 KVQEFLRKYEALKDLDIEWHFIGAIQTNKVKYLKNKVK---LIHSVDRKAIVDEISKRME 112
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
++ +L++VN E SKSG++ + + E+V L PN+ GLM I P Y
Sbjct: 113 HID-----ILIEVNVGQESSKSGVEENHLKELTEYV-LSKPNINLKGLMCI--PPYFEDT 164
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
E F L N + ++ K + ELSMGMS DFE AIE G+T +RIG+ +FG R+
Sbjct: 165 EKVRPFFAKLRNLKEDLEKTFNIK--LPELSMGMSHDFELAIEEGATIIRIGTYLFGQRQ 222
Query: 193 YA 194
Y
Sbjct: 223 YT 224
>gi|167762344|ref|ZP_02434471.1| hypothetical protein BACSTE_00698 [Bacteroides stercoris ATCC
43183]
gi|167699987|gb|EDS16566.1| pyridoxal phosphate enzyme, YggS family [Bacteroides stercoris ATCC
43183]
Length = 222
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQ+NK K + VP + ++ GV + K+ +++ +
Sbjct: 47 KVQEMTAKYESLPKDIEWHFIGHLQTNKIKYI---VPYVTLIHGVDSYKLLTEINRQAAK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EESK G C ++ + N+ GLM GM T
Sbjct: 104 AGR-TVNCLLQLHIAQEESKFGFSFDECREMLAGDEWKKLGNVRICGLM--GMATNTDNI 160
Query: 137 EN----FRTLLNCRAEV-CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E FR+L N E AE ELSMGMS D+ +AI GST VR+GS IFG R
Sbjct: 161 EQIKAEFRSLNNFFQEAKATWFSNAEWFRELSMGMSHDYHEAIAAGSTLVRVGSKIFGER 220
Query: 192 EY 193
Y
Sbjct: 221 IY 222
>gi|227536795|ref|ZP_03966844.1| alanine racemase domain protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227243351|gb|EEI93366.1| alanine racemase domain protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 244
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 10/175 (5%)
Query: 25 DKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP 82
+KY +DI HF+GHLQ+NK K LL ++ ++ + ++A L + + R
Sbjct: 65 EKYEALKDIPHVNHFIGHLQTNKVKDLLK--YDITCIQSLDRAELAQKLHQRLKAENR-T 121
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS--TPENFR 140
++V +QVNTS EESK G+ P + +V+ V L L+ GLMTIG+ S + FR
Sbjct: 122 IEVFIQVNTSFEESKFGVSPDKVVDLVKEVAL-LDTLKIKGLMTIGLLSTESEKVRQCFR 180
Query: 141 TLLNCRAEVCKALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L + + ++ AL + + ELSMGMSGD E AI G+T VR+G+ IFG R A
Sbjct: 181 LLKDIQQQII-ALDIPHVEMRELSMGMSGDLETAIAEGATVVRVGTAIFGQRPTA 234
>gi|401565118|ref|ZP_10805973.1| pyridoxal phosphate enzyme, YggS family [Selenomonas sp. FOBRC6]
gi|400188151|gb|EJO22325.1| pyridoxal phosphate enzyme, YggS family [Selenomonas sp. FOBRC6]
Length = 239
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 11/171 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
L ++KWH +GHLQ NK K V D++ V + ++A +DKA G K +LV
Sbjct: 73 TLEREVKWHLIGHLQRNKVKH---AVRQFDLIHSVDSVRLAQEIDKAAEKFG-KVQNILV 128
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVR-LRCPNLEFSGLMTIGMPDYTSTPEN---FRTLL 143
QVN + EESKSG+ ++ + LR L+ G M I P+Y E FR +
Sbjct: 129 QVNLAREESKSGVYREELDDVLAEIEVLRAIRLQ--GFMCIA-PNYDDVEECRPLFRAMY 185
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+V + D LSMGM+ D+E A+E G+ VR+G+ IFG R+YA
Sbjct: 186 ELFRQVKEREPRTADIRYLSMGMTHDYEIAVEEGANLVRVGTAIFGVRQYA 236
>gi|418464145|ref|ZP_13035086.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359757325|gb|EHK91480.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 231
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F + N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQFCQQQNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSG+ P + L + +H+ P+L GLM I P
Sbjct: 113 EQRSP-HKAPLNVLIQVNISNEASKSGVQPGAILDLAKHLE-NLPHLCLRGLMAIPEPTD 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 171 DVVRQEQVFYQMRTLFEQLQQALPNAQIDT-LSMGMTDDMQTAIKCGSTMVRVGTAIFGK 229
Query: 191 R 191
R
Sbjct: 230 R 230
>gi|332308055|ref|YP_004435906.1| alanine racemase domain-containing protein [Glaciecola sp.
4H-3-7+YE-5]
gi|410639921|ref|ZP_11350466.1| hypothetical protein GCHA_0690 [Glaciecola chathamensis S18K6]
gi|332175384|gb|AEE24638.1| alanine racemase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410140802|dbj|GAC08653.1| hypothetical protein GCHA_0690 [Glaciecola chathamensis S18K6]
Length = 227
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
+DI+WHF+G LQSNK + + N D V + KIA L+ S K L V +QVN
Sbjct: 73 DDIEWHFIGPLQSNKTRPV---AENFDWVHSIDRLKIAQRLNDQRS--AHKKLNVCIQVN 127
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
E SK+G+ P + E + PNL GLMTI P E R L+ +
Sbjct: 128 IDNEASKAGVPPEDVNLLAEQIS-NMPNLTLRGLMTI--PKAQQNAEMQRKSLSAMNALF 184
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
L Q + LSMGMS D + AIE GST VRIGS IFG R+
Sbjct: 185 VQLQTKYPQIDTLSMGMSNDMQLAIECGSTMVRIGSAIFGSRQ 227
>gi|312879667|ref|ZP_07739467.1| alanine racemase domain protein [Aminomonas paucivorans DSM 12260]
gi|310782958|gb|EFQ23356.1| alanine racemase domain protein [Aminomonas paucivorans DSM 12260]
Length = 232
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ W VGHLQ NK + L D + V ++++A +++ + R + VL++VN S
Sbjct: 74 VPWCLVGHLQRNKVRKAL---EVFDAIHTVDSQELAVSMERVLEEGQRTGVPVLLEVNVS 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAEVC 150
GE +KSG+ P + E V RC L GL+ +G + D + FR L ++
Sbjct: 131 GEAAKSGVSPEGAEALAETVVSRCSRLRLEGLLAVGPLVDDPEAIRGAFRLLGRIAGDLR 190
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ LG+ LSMGMS DFE A+E GST VR+G+ +FGPR
Sbjct: 191 RQLGL--PLATLSMGMSDDFEIAVEEGSTLVRLGTALFGPR 229
>gi|120598147|ref|YP_962721.1| alanine racemase domain-containing protein [Shewanella sp. W3-18-1]
gi|146293781|ref|YP_001184205.1| alanine racemase domain-containing protein [Shewanella putrefaciens
CN-32]
gi|120558240|gb|ABM24167.1| alanine racemase domain protein [Shewanella sp. W3-18-1]
gi|145565471|gb|ABP76406.1| alanine racemase domain protein [Shewanella putrefaciens CN-32]
Length = 232
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
N P DI+WHF+G LQSNK + + D + V +KIA L++ PL V +
Sbjct: 72 NYP-DIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIALRLNEQRPT-SMAPLNVCI 126
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST--PENFRTLLNC 145
Q+N S E++KSGID + + + E + + PNL+ GLM I ST + F L
Sbjct: 127 QINISDEDTKSGIDANQMMPLAELIS-QLPNLKLRGLMAIPTATDNSTLQRQEFTKLKQL 185
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
E+ + D LSMGMS D + AI GST VRIGS IFG R YA+
Sbjct: 186 FDELKQHYA---DVDTLSMGMSNDLDTAIACGSTMVRIGSAIFGERHYAE 232
>gi|429737656|ref|ZP_19271512.1| pyridoxal phosphate enzyme, YggS family [Selenomonas sp. oral taxon
138 str. F0429]
gi|429152019|gb|EKX94856.1| pyridoxal phosphate enzyme, YggS family [Selenomonas sp. oral taxon
138 str. F0429]
Length = 239
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
L ++KWH +GHLQ NK K V D++ V + ++A +DKA G K +LVQ
Sbjct: 74 LEREVKWHLIGHLQRNKVKH---AVRQFDLIHSVDSVRLAQEIDKAAEKFG-KVQNILVQ 129
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVR-LRCPNLEFSGLMTIGMPDYTSTPEN---FRTLLN 144
VN + EESKSG+ ++ + LR L+ G M I P+Y E FR +
Sbjct: 130 VNLAREESKSGVYREELDDVLAEIEVLRAIRLQ--GFMCIA-PNYDDVEECRPLFRAMYE 186
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+V + D LSMGM+ D+E A+E G+ VR+G+ IFG R+YA
Sbjct: 187 LFRQVKECEPRTADIRYLSMGMTHDYEIAVEEGANLVRVGTAIFGARQYA 236
>gi|333379729|ref|ZP_08471448.1| YggS family pyridoxal phosphate enzyme [Dysgonomonas mossii DSM
22836]
gi|332884875|gb|EGK05130.1| YggS family pyridoxal phosphate enzyme [Dysgonomonas mossii DSM
22836]
Length = 244
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 11/162 (6%)
Query: 36 HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEE 95
H++GHLQ+NK K +L V +E + + LD+ + G K + +LVQVN+S EE
Sbjct: 77 HYIGHLQTNKIKEVLRYVT---CIESIDRLDVVQKLDQRLLFEG-KSIDILVQVNSSYEE 132
Query: 96 SKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCK 151
SK G+DP + + ++ + + L+ GLMTIG+ +++ E FR L + + +V +
Sbjct: 133 SKFGLDPINVIPFIKKI-AKYDTLKIKGLMTIGL--FSAEEEKVRRCFRLLKDIQRQVIE 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
D +LSMGMSGD E AIE G+T +R+G+ IFG R Y
Sbjct: 190 ENISNVDMTQLSMGMSGDLEVAIEEGATIIRVGTAIFGERIY 231
>gi|406674206|ref|ZP_11081417.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum CCUG
30536]
gi|405584617|gb|EKB58507.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum CCUG
30536]
Length = 219
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ + KY NLP DI+WH +GHLQ+NK K + P + ++ V +EK+ ++K
Sbjct: 47 KVQELLSKYENLPSDIEWHLIGHLQTNKVKYI---APFIHTIQSVDSEKLLAEINKQAQL 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHV-RLRCPNLEFSGLMTIG--MPDYTS 134
GR + VL+Q+ + E++K G+ C ++E + + P++ GLM + + D T
Sbjct: 104 HGR-TITVLLQIKIAEEDTKFGMTFEDCDALLEKLAQGDFPHVAIRGLMGMASFVEDETQ 162
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F TL + K + LSMGMSGD+ AI GS SVRIGS IFG R Y
Sbjct: 163 IEREFTTLKKYFDQKKKDHPL----LYLSMGMSGDYPLAISCGSNSVRIGSAIFGERNYT 218
Query: 195 K 195
K
Sbjct: 219 K 219
>gi|323356254|gb|EGA88058.1| YBL036C-like protein [Saccharomyces cerevisiae VL3]
Length = 247
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 12/168 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGR--KPLKVL 86
LP+DIKWHF+G LQ+NK K L VPNL VE + + K A L+++ + P+
Sbjct: 82 LPDDIKWHFIGGLQTNKCKD-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCN 140
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGMPD--YTSTPEN--FR 140
VQ+NTS E+ KSG++ + + V L C ++ +GLMTIG + + + EN F
Sbjct: 141 VQINTSREDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFA 200
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
TL+ + ++ G + +LSMGMS DF +AI G+ VRIG+ IF
Sbjct: 201 TLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIF 245
>gi|88801062|ref|ZP_01116610.1| hypothetical protein MED297_19052 [Reinekea blandensis MED297]
gi|88776201|gb|EAR07428.1| hypothetical protein MED297_19052 [Reinekea sp. MED297]
Length = 235
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNTS 92
+WHF+G LQSNK + + + D V + KIA L D+ + R PL VL+QVN S
Sbjct: 77 QWHFIGPLQSNKTRLI---AEHADWVHTIDRLKIARRLSDQRPPD--RAPLNVLIQVNIS 131
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVC 150
+ +K+G+D S G+ + + PNL GLMTI D + FR L N +A+
Sbjct: 132 DDPAKAGVDLSQIAGLADRI-ATLPNLTLRGLMTITAANLDEATLAAQFRELKNAQAD-- 188
Query: 151 KALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L C E+SMGMS DFE AI G+T VR+GS IFG R
Sbjct: 189 --LITHHPTCTEVSMGMSQDFELAIANGATMVRVGSDIFGHR 228
>gi|420237936|ref|ZP_14742379.1| pyridoxal phosphate enzyme, YggS family [Rhizobium sp. CF080]
gi|398089318|gb|EJL79839.1| pyridoxal phosphate enzyme, YggS family [Rhizobium sp. CF080]
Length = 219
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++ H +G LQSNKA V D++E V EKIA L + G+ P K+ VQVNT
Sbjct: 74 DLELHLIGPLQSNKAAD---AVALFDVIETVDREKIARALADEIRKQGKAP-KLYVQVNT 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K+GI+P + VE R L GLM I P P LL A++ K
Sbjct: 130 GLEPQKAGIEPKETVAFVELCRKEL-GLSVEGLMCI--PPAEENPGPHFALL---AKLAK 183
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G+ + LSMGMSGDFE A+E G+TSVR+GS IFG R
Sbjct: 184 ECGVEK----LSMGMSGDFETAVEFGATSVRVGSAIFGSR 219
>gi|410644340|ref|ZP_11354822.1| hypothetical protein GAGA_0356 [Glaciecola agarilytica NO2]
gi|410136188|dbj|GAC03221.1| hypothetical protein GAGA_0356 [Glaciecola agarilytica NO2]
Length = 184
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
+DI+WHF+G LQSNK + + N D V + KIA L+ S K L V +QVN
Sbjct: 30 DDIEWHFIGPLQSNKTRPV---AENFDWVHSIDRLKIAQRLNDQRS--AHKKLNVCIQVN 84
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
E SK+G+ P + E + PNL GLMTI P E R L+ +
Sbjct: 85 IDNEASKAGVPPEDVNLLAEQIS-NMPNLTLRGLMTI--PKAQQNAEMQRKSLSAMNALF 141
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
L Q + LSMGMS D + AIE GST VRIGS IFG R+
Sbjct: 142 VQLQTKYPQIDTLSMGMSNDMQLAIECGSTMVRIGSAIFGSRQ 184
>gi|423317317|ref|ZP_17295222.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum ATCC
43767]
gi|405581450|gb|EKB55479.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum ATCC
43767]
Length = 219
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ + KY NLP DI+WH +GHLQ+NK K + P + ++ V +EK+ ++K
Sbjct: 47 KVQELLSKYENLPSDIEWHLIGHLQTNKVKYI---APFIHTIQSVDSEKLLAEINKQAQL 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHV-RLRCPNLEFSGLMTIG--MPDYTS 134
GR + VL+Q+ + E++K G+ C ++E + + P++ GLM + + D T
Sbjct: 104 HGR-TITVLLQIKIAEEDTKFGMTFEDCDALLEKLAQGDFPHVAIRGLMGMASFVEDETQ 162
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
F TL + K + LSMGMSGD+ AI GS SVRIGS IFG R Y
Sbjct: 163 IEREFTTLKKYFDQKKKDHPLQY----LSMGMSGDYPLAISCGSNSVRIGSAIFGERNYT 218
Query: 195 K 195
K
Sbjct: 219 K 219
>gi|325981756|ref|YP_004294158.1| hypothetical protein NAL212_1086 [Nitrosomonas sp. AL212]
gi|325531275|gb|ADZ25996.1| protein of unknown function UPF0001 [Nitrosomonas sp. AL212]
Length = 249
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 13/165 (7%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+IKW +GHLQ+NKAK L ++ + K+A LDK + N GR + V VQVN+
Sbjct: 81 NIKWAVIGHLQTNKAKYLARFANEFQALDSL---KVAEELDKRLQNEGR-AIDVYVQVNS 136
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPN---LEFSGLMTIGM--PDYTSTPENFRTLLNCR 146
SGE SK G+ P V+ + PN L GLMT+ + D+ E F + +
Sbjct: 137 SGEASKFGLPPEDVRDFVQ----KLPNYSSLRIKGLMTLAIFSSDHDRVRECFVKMREIQ 192
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
A + + ELSMGMSGD+E AIE G+T VR+G IFG R
Sbjct: 193 AMLRQEAPAGLSFDELSMGMSGDYELAIEEGATVVRVGQAIFGKR 237
>gi|389714552|ref|ZP_10187129.1| hypothetical protein HADU_09226 [Acinetobacter sp. HA]
gi|388609856|gb|EIM38999.1| hypothetical protein HADU_09226 [Acinetobacter sp. HA]
Length = 228
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+GH+Q NK K L D V GV IA L + + PL + +QVN
Sbjct: 73 EIEWHFIGHVQRNKTKPL---AEKFDWVHGVDRLIIAERLSNQRED-NQVPLNICLQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+++K G P +V + + P L GLM I P+ T+ + + L V
Sbjct: 129 DGQDTKDGCQPEEVPDLVAQIS-QLPKLRLRGLMVIPAPNNTAAFADAKALFEA---VKM 184
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
AED LSMGMSGD +AI GST VR+G+ +FG R
Sbjct: 185 QHAKAEDWDTLSMGMSGDMTEAIAAGSTMVRVGTALFGAR 224
>gi|403222166|dbj|BAM40298.1| proline synthetase associated protein [Theileria orientalis strain
Shintoku]
Length = 223
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 95/169 (56%), Gaps = 14/169 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+L DIKWHF+GHLQ+NK LL VPNL M+E + + +A L +S + L VLV
Sbjct: 60 SLSSDIKWHFIGHLQTNKCSLLL-RVPNLHMLESLDSIDLALKLSDLMSREPSRTLFVLV 118
Query: 88 QVNTSGEESKSGIDPSS---CLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLN 144
QVNTS + ++ G+D L +V+ V L L F+GLMTIG T + F L++
Sbjct: 119 QVNTSLKPTQFGLDYRQFDLILALVKAV-LNSQGLVFTGLMTIG----DDTGDCFDRLVS 173
Query: 145 CRAEVCKALGMAEDQCE-----LSMGMSGDFEQAIEMGSTSVRIGSTIF 188
R + + + C+ LSMGMS D+ AI GST +RIGS IF
Sbjct: 174 IRDRLAECSPECKLLCDRGNFVLSMGMSNDYRLAISKGSTQIRIGSLIF 222
>gi|430005736|emb|CCF21539.1| conserved hypothetical protein; putative signal peptide [Rhizobium
sp.]
Length = 219
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
+DIK H +G LQSNKA V D++E V EKIA L + R+P ++ VQVN
Sbjct: 73 KDIKLHLIGPLQSNKAAD---AVALFDVIETVDREKIARALADEMQKQDRQP-RLYVQVN 128
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFS--GLMTIGMPDYTSTPENFRTLLNCRAE 148
T E K+GI P + V+ R +LE S GLM I D P +F L
Sbjct: 129 TGLEPQKAGIAPRETVAFVDFCR---GDLELSIEGLMCIPPADENPGP-HFALLAKL--- 181
Query: 149 VCKALGMAEDQC---ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
DQC +LSMGMSGDFE AIE G+TSVR+GS IFG R
Sbjct: 182 --------ADQCGLQKLSMGMSGDFETAIEFGATSVRVGSAIFGNR 219
>gi|293371408|ref|ZP_06617839.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CMC
3f]
gi|292633605|gb|EFF52163.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CMC
3f]
Length = 222
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQ+NK K + +P + M+ G+ + K+ ++K
Sbjct: 47 KVQEMTAKYESLPKDIEWHFIGHLQTNKIKYM---IPYVAMIHGIDSYKLLAEVNKQAVK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EE+K G P C ++ + ++ GLM GM T
Sbjct: 104 AGR-TVNCLLQIHVAQEETKFGFSPEECKEMLNAGEWKELTHVRICGLM--GMASNTDCI 160
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E F L E+ + D CELSMGMS D+ +AI GST VR+GS IFG R
Sbjct: 161 EQINWEFGLLNRLFNEIKTTWFIHSDTFCELSMGMSHDYHEAIAAGSTLVRVGSKIFGER 220
Query: 192 EY 193
Y
Sbjct: 221 IY 222
>gi|257067989|ref|YP_003154244.1| pyridoxal phosphate enzyme, YggS family [Brachybacterium faecium
DSM 4810]
gi|256558807|gb|ACU84654.1| pyridoxal phosphate enzyme, YggS family [Brachybacterium faecium
DSM 4810]
Length = 252
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ HF+G LQ+NKA+ + V + + V + IA+ L++ G + VLVQVNTS
Sbjct: 94 VPRHFIGRLQTNKARDV---VAFAETIHSVDRDGIADALERRAETAGVQ-RDVLVQVNTS 149
Query: 93 GEESKSGIDPSS-CLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEV 149
GEESK G P++ + + L P L GLMTIG D + ++ + L R V
Sbjct: 150 GEESKGGFAPTAEAIAPMVQRLLASPVLRPVGLMTIGANTSDAGAVRDSLQLLRRLRDAV 209
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ G AE ELSMGMSGD E A+E G+T VR+GS IFG R
Sbjct: 210 REQTG-AEHLAELSMGMSGDLEIAVEEGATIVRVGSAIFGAR 250
>gi|160882640|ref|ZP_02063643.1| hypothetical protein BACOVA_00593 [Bacteroides ovatus ATCC 8483]
gi|237718405|ref|ZP_04548886.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|299149060|ref|ZP_07042122.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 3_1_23]
gi|336414048|ref|ZP_08594395.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
3_8_47FAA]
gi|383113848|ref|ZP_09934616.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D2]
gi|423289192|ref|ZP_17268042.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL02T12C04]
gi|423298481|ref|ZP_17276538.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL03T12C18]
gi|156111955|gb|EDO13700.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus ATCC
8483]
gi|229452338|gb|EEO58129.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298513821|gb|EFI37708.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 3_1_23]
gi|313696000|gb|EFS32835.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D2]
gi|335934197|gb|EGM96194.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
3_8_47FAA]
gi|392663022|gb|EIY56576.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL03T12C18]
gi|392667888|gb|EIY61393.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL02T12C04]
Length = 222
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQ+NK K + +P + M+ G+ + K+ ++K
Sbjct: 47 KVQEMTAKYESLPKDIEWHFIGHLQTNKIKYM---IPYVAMIHGIDSYKLLAEVNKQAVK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EE+K G P C ++ + ++ GLM GM T
Sbjct: 104 AGR-TVNCLLQIHVAQEETKFGFSPEECKEMLNAGEWKELTHVRICGLM--GMASNTDCI 160
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E F L E+ + D CELSMGMS D+ +AI GST VR+GS IFG R
Sbjct: 161 EQINREFGLLNRLFNEIKTTWFIHSDTFCELSMGMSHDYHEAIAAGSTLVRVGSKIFGER 220
Query: 192 EY 193
Y
Sbjct: 221 IY 222
>gi|373500583|ref|ZP_09590962.1| YggS family pyridoxal phosphate enzyme [Prevotella micans F0438]
gi|371952969|gb|EHO70799.1| YggS family pyridoxal phosphate enzyme [Prevotella micans F0438]
Length = 227
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 10/171 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP+DI+WHF+GHLQSNK K L P + M+E V + K+ ++K + R + VL+
Sbjct: 62 SLPKDIEWHFIGHLQSNKVKYL---APYISMIEAVDSLKLLKEINKQAAKYER-TIDVLL 117
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+++ + EE+K G P +C ++ + R N+ SGLM + + D T +
Sbjct: 118 ELHIAEEETKYGFTPDACRQLLAEGQWRELQNVHISGLMMMASNVDDKNQIRREMLTAAD 177
Query: 145 CRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ K A D CE S GMS D+ AIE ST VR+G+ IFG R Y
Sbjct: 178 FFDEI-KEKYFASDARFCERSWGMSNDYLTAIECRSTMVRVGTAIFGHRVY 227
>gi|260552476|ref|ZP_05825852.1| TIM-barrel fold family protein [Acinetobacter sp. RUH2624]
gi|260405283|gb|EEW98779.1| TIM-barrel fold family protein [Acinetobacter sp. RUH2624]
Length = 235
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+GH+Q NK K L D V GV IA L + + L + +QVN
Sbjct: 78 DIEWHFIGHVQRNKTKHL---AEEFDWVHGVDRLIIAERLSNQRGD-DQAALNICLQVNI 133
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
G+++K G P +V + + P ++ GLM I PD + + + L + EV +
Sbjct: 134 DGQDTKDGCAPEEVAELVAQIS-QLPKIKLRGLMVIPAPDNIAAFADAKKLFD---EVKE 189
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
A+D LSMGMSGD + AI GST VR+G+ +FG R+
Sbjct: 190 QHAHAQDWDTLSMGMSGDLDAAIVAGSTMVRVGTALFGKRD 230
>gi|220916555|ref|YP_002491859.1| alanine racemase domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954409|gb|ACL64793.1| alanine racemase domain protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 223
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP ++WHF+G LQ+NKAK L G + +V V E++A L + G +VL+
Sbjct: 60 DLP-GLRWHFIGGLQTNKAKYLAG---RVALVHAVDREELAAELSRRFGQKGAT-ARVLL 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
+VN GE SK G P + VR P++E +GLM I P+ P +FR L R
Sbjct: 115 EVNVGGEASKEGCPPDRVEALAAAVRA-LPSIELAGLMCIPPPEDDPRP-HFRALRALR- 171
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
LG+ E LSMGMS D+ A+E G+T VR+GS IFG R
Sbjct: 172 ---DRLGLRE----LSMGMSADWRIAVEEGATLVRVGSAIFGAR 208
>gi|393777751|ref|ZP_10366042.1| hypothetical protein MW7_2734 [Ralstonia sp. PBA]
gi|392715548|gb|EIZ03131.1| hypothetical protein MW7_2734 [Ralstonia sp. PBA]
Length = 232
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 89/169 (52%), Gaps = 10/169 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+L ++WHF+G LQSNK + + + D V + K+A L + G +PL+V +
Sbjct: 70 DLRPQLEWHFIGPLQSNKTRQV---AEHFDWVHSIDRLKLAQRLSEQ-RPAGLQPLQVCI 125
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
QVN SGE +K G++P+ L + + + PNL GLM + P E R R
Sbjct: 126 QVNISGEATKGGVEPAEVLPLAQAI-APLPNLRLRGLMAVPAPS-DDPAEQRRAFAALRH 183
Query: 148 --EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ + G+A D LSMGMS D E AI G+T VRIG+ IFG R A
Sbjct: 184 TLDTLRTGGLAVD--TLSMGMSADLESAIAEGATIVRIGTAIFGARPRA 230
>gi|363755742|ref|XP_003648086.1| hypothetical protein Ecym_7450 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892122|gb|AET41269.1| hypothetical protein Ecym_7450 [Eremothecium cymbalariae
DBVPG#7215]
Length = 273
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 12/172 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL--GRKPLKV 85
LP+D+KWHF G LQ+NK K L + NL VE + + K A L+++ + P++
Sbjct: 98 QLPQDVKWHFTGTLQTNKCKDL-AKIKNLYAVETIDSVKKARKLEESRAKFYPDASPVRC 156
Query: 86 LVQVNTSGEESKSGI--DPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD--YTSTPEN--F 139
+Q+NTS E K+G+ + C + + +L+ GLMTIG + ++ + EN F
Sbjct: 157 SIQINTSYESQKAGLCKEEEICELVEYLISPDTKHLQLRGLMTIGSWEVSHSVSGENKEF 216
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L+ + ++ G+ ELSMGMS DFEQAI+ G++ VRIG+ IFG R
Sbjct: 217 SILVGWKKKLDAKYGI---DLELSMGMSSDFEQAIKQGTSEVRIGTDIFGAR 265
>gi|395804111|ref|ZP_10483352.1| alanine racemase [Flavobacterium sp. F52]
gi|395433755|gb|EJF99707.1| alanine racemase [Flavobacterium sp. F52]
Length = 243
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 97/175 (55%), Gaps = 11/175 (6%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
NLP ++ HF+GHLQ+NK K +L V + ++ + +A+ L K + N RK L V V
Sbjct: 72 NLP--VERHFIGHLQTNKIKDVLKYVTCIQSLDRIN---LADELHKQLQNQNRK-LDVFV 125
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP--ENFRTLLNC 145
QVNTS EESK G+ P L ++ ++ L GLMTIG+ D + R L
Sbjct: 126 QVNTSYEESKFGLAPEEVLSFIKKIK-TYDTLNIKGLMTIGLLDVEKEKMIPSLRLLRTI 184
Query: 146 RAEVCKALGMAEDQ-CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
R E+ G+ + Q +LSMGMS D E AI GS VRIG++IFG R K+ N
Sbjct: 185 RDEIYSE-GIDDLQNLKLSMGMSQDLELAIAEGSNMVRIGTSIFGNRFLGKEIWN 238
>gi|359406919|ref|ZP_09199562.1| pyridoxal phosphate enzyme, YggS family [Prevotella stercorea DSM
18206]
gi|357554417|gb|EHJ36134.1| pyridoxal phosphate enzyme, YggS family [Prevotella stercorea DSM
18206]
Length = 222
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+GHLQ+NK K + P + M++ V + K+ ++K + GR +KVL++
Sbjct: 58 LPKDIEWHFIGHLQTNKVKYI---APYISMIDAVDSLKLLREINKQAAAHGR-TIKVLLE 113
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIG--MPDYTSTPENFRTLLNC 145
++ + EE+K G+ +C ++E R N++ GLM + + D + + F +
Sbjct: 114 LHIAEEETKYGLSLDACRELLEGGEWRALQNVQICGLMMMASHVDDESVIRKEFMLAADF 173
Query: 146 RAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
EV KA A+D CE S GMS D+ A E ST VR+G+ IFG R Y
Sbjct: 174 FDEV-KARYFADDDAFCERSWGMSHDYHIAAECRSTMVRVGTYIFGERNY 222
>gi|227326779|ref|ZP_03830803.1| putative alanine racemase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 270
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++W +GHLQ+NKAK + ++ + ++A LD+ + GR L V VQVNT
Sbjct: 96 DLQWSVIGHLQTNKAKLVARFATEFQALDSL---RLAEALDRRLHVEGRS-LDVFVQVNT 151
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT----LLNCRA 147
SGE SK G+ P ++ + P L GLMT+ + ++S E R L N R
Sbjct: 152 SGEASKYGLSPEDVPAFIQALPA-FPTLRVRGLMTLAL--FSSEAERVRQCFIRLRNLRD 208
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ + + ELSMGMSGDFE AIE G+T VR+G IFG R
Sbjct: 209 KLQQNAPVGIGLDELSMGMSGDFEIAIEEGATVVRVGQAIFGAR 252
>gi|422021982|ref|ZP_16368491.1| PLP-binding domain-containing protein [Providencia sneebia DSM
19967]
gi|414097732|gb|EKT59385.1| PLP-binding domain-containing protein [Providencia sneebia DSM
19967]
Length = 231
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ F DKY L WHF+G LQSNK++ + + D + KIA L+ N
Sbjct: 64 KIQYFADKYPL----TWHFIGPLQSNKSRLV---AEHFDWFHTLDRVKIAQRLNDQRPN- 115
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD--YTSTP 136
+ PL VL+Q+N S E SKSGI L + H + PNL GLMTI P+ Y
Sbjct: 116 DKAPLNVLIQINISDENSKSGIKLEQ-LDELAHQVSQMPNLILRGLMTIPAPETHYERQC 174
Query: 137 ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
F + ++ + LSMGM+ D E AI GST VRIG+ IFG R+Y K
Sbjct: 175 AAFHQMEQAYQQLQTHYPTVDT---LSMGMTDDMEAAIHCGSTLVRIGTAIFGARDYTK 230
>gi|444337932|ref|ZP_21151847.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|443546004|gb|ELT55723.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 211
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 38 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 92
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSG+ P L + +H+ P+L GLM I P
Sbjct: 93 EQRSP-HKAPLNVLIQVNISNEASKSGVQPGEILDLAKHLE-NLPHLCLRGLMAIPEPTD 150
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 151 DVARQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 209
Query: 191 R 191
R
Sbjct: 210 R 210
>gi|329296971|ref|ZP_08254307.1| alanine racemase domain-containing protein [Plautia stali symbiont]
Length = 235
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
D++WHF+G LQSNK++ + N V +IA L D+ + L PL VL+QVN
Sbjct: 74 DLQWHFIGPLQSNKSRLV---AENFAWCHTVDRLRIAQRLNDQRPAAL--PPLNVLIQVN 128
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAE 148
S E SKSGI + G+ + + P L GLM I P DY R L C+
Sbjct: 129 ISDEHSKSGIMLEAVAGLAQQIAA-LPRLRLRGLMAIPAPEQDYA------RQLAVCQQM 181
Query: 149 VCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
+ +D + LS+GMS D + AI GST VRIG T+FG R+YA+ Q
Sbjct: 182 ASAFRALQQDYPDVDTLSLGMSDDMDAAIAAGSTMVRIGITVFGARDYARPSQQ 235
>gi|422466131|ref|ZP_16542707.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA4]
gi|422470052|ref|ZP_16546573.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA3]
gi|314981156|gb|EFT25250.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA3]
gi|315091979|gb|EFT63955.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL110PA4]
Length = 198
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQ+N+S
Sbjct: 35 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQMNSS 90
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 91 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 149
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+
Sbjct: 150 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGTRD 191
>gi|365967953|ref|YP_004949515.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365746866|gb|AEW77771.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 231
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSG+ P L + +H+ P+L GLM I P
Sbjct: 113 EQRSP-HKAPLNVLIQVNISNEASKSGVQPGEILDLAKHLE-NLPHLCLRGLMAIPEPTD 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 171 DVARQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 229
Query: 191 R 191
R
Sbjct: 230 R 230
>gi|295675574|ref|YP_003604098.1| alanine racemase [Burkholderia sp. CCGE1002]
gi|295435417|gb|ADG14587.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
Length = 240
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 91/174 (52%), Gaps = 18/174 (10%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVL 86
+L ++WHF+G LQSNK + + + D V V KIA L ++ NL PL V
Sbjct: 79 DLRASLEWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQRPDNL--PPLNVC 133
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP----DYTSTPE-NFRT 141
+QVN SGE SKSG+ P I + P L+ GLM+I P D P R
Sbjct: 134 LQVNVSGEASKSGVAPDEAAAIAHQITA-LPKLKLRGLMSIPEPAGDLDAQRAPHRQLRE 192
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
L E + G+A D LSMGMS D E A+ G+T VR+G+ IFG R+Y++
Sbjct: 193 LF----ERLRNDGLALDT--LSMGMSADLEAAVLEGATIVRVGTAIFGARDYSR 240
>gi|441206087|ref|ZP_20972878.1| alanine racemase, N-terminal domain protein 2 [Mycobacterium
smegmatis MKD8]
gi|440628635|gb|ELQ90431.1| alanine racemase, N-terminal domain protein 2 [Mycobacterium
smegmatis MKD8]
Length = 252
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++W +GHLQ+NKAK + + + N + A LD+ + LGR+ L V VQVNT
Sbjct: 87 DVEWSVIGHLQTNKAKDVAEFAAEF---QALDNPRAAAALDRRLQALGRQ-LDVYVQVNT 142
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFR---TLLNCRAE 148
SGEESK G+ P + ++ + L GLMTI + ++ PE R LL +
Sbjct: 143 SGEESKYGLAPDDVIPFLKTLPAYTA-LRVRGLMTIAV--FSIDPERVRPCFRLLRSLRD 199
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ L + ELSMGMSGD+E AI GST VR+G IFG R Q
Sbjct: 200 QARDLDLI-GPGELSMGMSGDYELAIAEGSTCVRVGQAIFGARPTPDSQ 247
>gi|366996757|ref|XP_003678141.1| hypothetical protein NCAS_0I01290 [Naumovozyma castellii CBS 4309]
gi|342304012|emb|CCC71797.1| hypothetical protein NCAS_0I01290 [Naumovozyma castellii CBS 4309]
Length = 281
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVL-- 86
LP+DIKWHF+G LQ+NK K L +PNL VE V + K A L++A +L
Sbjct: 104 LPQDIKWHFIGGLQTNKCKDL-AKIPNLYCVETVDSLKKAKKLNEARGKFQPDADAILCD 162
Query: 87 VQVNTSGEESKSGI-DPSSCLGIVEHVRLR--CPNLEFSGLMTIG-----MPDYTSTPEN 138
+Q+NTS EE KSG+ + +V+ + + ++ +GLMTIG D + ++
Sbjct: 163 IQINTSNEEQKSGLFNKEEIFELVKFFQDKDVAKHIRLNGLMTIGSWEVSHEDQSIDNDD 222
Query: 139 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
F L + + K G ++SMGMS D++QAI G++ VRIG+ IFG R
Sbjct: 223 FTKLGEWKQLIDKEFGT---DLKMSMGMSADYKQAIRQGTSEVRIGTDIFGVR 272
>gi|284044976|ref|YP_003395316.1| alanine racemase [Conexibacter woesei DSM 14684]
gi|283949197|gb|ADB51941.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
Length = 222
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 30 PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
P W F+GHLQS K K +L P + ++ V ++ + + L K R L+VL++V
Sbjct: 79 PGLFTWDFIGHLQSRKVKQIL---PWVRLIHSVASDSVLDQLGK--HGAARPDLEVLIEV 133
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
N +GE SKSG+ P+ VE RCP + SGLMT MP + PE+ R E+
Sbjct: 134 NVAGEASKSGVAPADLAAFVE----RCP-VTVSGLMT--MPPLAAAPEDNRRHFAALREL 186
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
+ G+ LSMG S D+E A+E G+T VR+GST++
Sbjct: 187 AASHGL----RRLSMGTSQDYEVAVEEGATIVRLGSTLY 221
>gi|416077294|ref|ZP_11585838.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|416093750|ref|ZP_11588495.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|444349143|ref|ZP_21156655.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|348004091|gb|EGY44622.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348008715|gb|EGY48958.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|443545314|gb|ELT55136.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 231
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F ++N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQFCQQHNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSG+ P L + +H+ P+L GLM I P
Sbjct: 113 EQRSP-HKAPLNVLIQVNISNEASKSGVQPGEILDLAKHLE-NLPHLCLRGLMAIPEPTD 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 171 DVARQEQVFYQMRVLFEQLQQALPNAQIDT-LSMGMTDDMQMAIKCGSTMVRVGTAIFGK 229
Query: 191 R 191
R
Sbjct: 230 R 230
>gi|237749379|ref|ZP_04579859.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229380741|gb|EEO30832.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 236
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 98/187 (52%), Gaps = 10/187 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y++ + + I + ++WHF+G +QSNK +++ + D V V EKIA L
Sbjct: 58 YEQEAVSKIESIRQSRPDLKLEWHFIGPIQSNKTRSI---AEHFDWVHSVDREKIARRLS 114
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPD 131
++ NL PL V +QVN S E++KSG+ P + + V PNL GLM I P+
Sbjct: 115 EQRPENL--PPLNVCLQVNISKEKTKSGVLPEEVSVLAKAVSA-MPNLRLRGLMAI--PE 169
Query: 132 YTSTPENFRTLLNCRAEVCKALGMA-EDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
S P R + + L + D LSMGMS D E AI+ G+T+VRIG+ IFG
Sbjct: 170 PESDPVKQREPFSAMKTLFDQLVQSGYDLDTLSMGMSDDMETAIQEGATTVRIGTAIFGK 229
Query: 191 REYAKKQ 197
R Y KQ
Sbjct: 230 RSYPDKQ 236
>gi|39935862|ref|NP_948138.1| hypothetical protein RPA2795 [Rhodopseudomonas palustris CGA009]
gi|39649716|emb|CAE28237.1| Protein of unknown function UPF0001 [Rhodopseudomonas palustris
CGA009]
Length = 260
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 19 KLLRFIDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
KL DK ++ D I+W +GHLQ+NK K L+ ++ + ++A+ L++ +
Sbjct: 77 KLQEARDKRDILADLPIRWSIIGHLQTNKVKYLVRFAAEFHALD---SPRLADELNRRLD 133
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
GR L V VQVNTSGE SK G+ P + +E + P L+ GLMT+ + +
Sbjct: 134 AEGRD-LDVFVQVNTSGEASKYGLAPCDLVPFIERLS-DYPRLKPRGLMTLAIFSAETGR 191
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
FR L R +A+ + D ELSMGMSGDFE AIE G+T VR+G IFG R
Sbjct: 192 VRGCFRLLRELRD---RAIRVHPDLTELSMGMSGDFEIAIEEGATVVRVGQAIFGAR 245
>gi|134294804|ref|YP_001118539.1| alanine racemase domain-containing protein [Burkholderia
vietnamiensis G4]
gi|387901398|ref|YP_006331737.1| hypothetical protein MYA_0639 [Burkholderia sp. KJ006]
gi|134137961|gb|ABO53704.1| alanine racemase domain protein [Burkholderia vietnamiensis G4]
gi|387576290|gb|AFJ85006.1| hypothetical protein MYA_0639 [Burkholderia sp. KJ006]
Length = 232
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 24 IDKYNLPEDIK----WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNL 78
IDK + D++ WHF+G LQSNK + + D V V KIA L ++ L
Sbjct: 63 IDKIDALADLRSALEWHFIGPLQSNKTRAV---AERFDWVHSVDRLKIAQRLSEQRPPQL 119
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP----DYTS 134
PL V +QVN SGEESKSG+ P+ + V P L GLM I P D
Sbjct: 120 --PPLNVCIQVNISGEESKSGVAPADVAELARAVAA-LPALRLRGLMAIPEPAGDTDAQR 176
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
P L+ + +A G+A D LSMGMS D E A+ G+T VR+G+ IFG R+Y+
Sbjct: 177 APHR---ALHALFDTLRAHGLALDT--LSMGMSADLEAAVLEGATIVRVGTAIFGARDYS 231
>gi|26991770|ref|NP_747195.1| alanine racemase [Pseudomonas putida KT2440]
gi|24986880|gb|AAN70659.1|AE016710_4 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 228
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK K + + D V V KIA L + G PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCKA 152
+SKSG P+ + + V PNL GLM I P D + F +L + +
Sbjct: 132 DSKSGCTPADLPALAKAVA-ALPNLRLRGLMAIPEPTEDRATQEAAFASLRKLQ----EG 186
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
LG+ D LSMGMS D E AI G+T VRIG+ +FG R+Y
Sbjct: 187 LGLGLD--TLSMGMSHDLEAAIAQGATWVRIGTALFGARDY 225
>gi|217077921|ref|YP_002335639.1| hypothetical protein THA_1872 [Thermosipho africanus TCF52B]
gi|419760513|ref|ZP_14286788.1| hypothetical protein H17ap60334_06756 [Thermosipho africanus
H17ap60334]
gi|217037776|gb|ACJ76298.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
gi|407514351|gb|EKF49178.1| hypothetical protein H17ap60334_06756 [Thermosipho africanus
H17ap60334]
Length = 227
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 93/163 (57%), Gaps = 10/163 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+I+WHF+G +Q NK K + VP ++ V + +DK LG K ++L+QVN
Sbjct: 73 NIEWHFIGRIQINKLKYI---VPVASLIHSVSRIEEIEVIDKISKKLG-KIQEILIQVNV 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEE+KSG+ P + ++E +L N++ GLMT M +T E R + +A V +
Sbjct: 129 SGEETKSGVKPEQLIDLIEKSKL-YENVKVIGLMT--MAPFTDNEEIIRNVFK-KARVLR 184
Query: 152 ALGMAE--DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
E D ELSMGMS D+ A+E G+T +RIGS IFG R+
Sbjct: 185 DNVSKEFPDVVELSMGMSNDYLIALEEGATILRIGSKIFGSRK 227
>gi|225567964|ref|ZP_03776989.1| hypothetical protein CLOHYLEM_04037 [Clostridium hylemonae DSM
15053]
gi|225163252|gb|EEG75871.1| hypothetical protein CLOHYLEM_04037 [Clostridium hylemonae DSM
15053]
Length = 231
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 18/185 (9%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +DKY LPEDI WH +GHLQ NK K + + +++ V + ++A ++K
Sbjct: 56 KVQELVDKYGALPEDIHWHMIGHLQRNKVKYI---IDKAELIHSVDSLRLAETIEKEAEK 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+L++VN + EESK G+ P IVE + +L GLMTI Y PE
Sbjct: 113 -HNITANILIEVNVAREESKFGVMPEELDEIVEKI-AGFNHLNVKGLMTIA--PYVENPE 168
Query: 138 NFRTLLNCRAEVCK-ALGMAEDQCE------LSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
R + A + K ++ +A + LSMGM+ D+E A+E G+T VR+G+ IFG
Sbjct: 169 ENRAVF---ARLRKLSVDIASKNVDNMNMSILSMGMTNDYEVAVEEGATMVRVGTGIFGE 225
Query: 191 REYAK 195
R+YA+
Sbjct: 226 RDYAQ 230
>gi|416051150|ref|ZP_11577268.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347993345|gb|EGY34713.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 231
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD 72
Y + ++ ++F + N+ +++WHF+G LQSNK + + D ++ + KIA+ L+
Sbjct: 58 YVQEGVEKIQFCQQQNI--NLEWHFIGPLQSNKTRLV---AEYFDWMQTLDRAKIADRLN 112
Query: 73 KAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 130
+ S + PL VL+QVN S E SKSG+ P L + +H+ P+L GLM I P
Sbjct: 113 EQRSP-HKAPLNVLIQVNISNEASKSGVQPGEILDLAKHLE-NLPHLCLRGLMAIPEPTD 170
Query: 131 DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
D + F + ++ +AL A+ LSMGM+ D + AI+ GST VR+G+ IFG
Sbjct: 171 DVVRQEQVFYQMRTLFEQLQQALPNAQIDT-LSMGMTDDMQTAIKCGSTMVRVGTAIFGK 229
Query: 191 R 191
R
Sbjct: 230 R 230
>gi|387771083|ref|ZP_10127255.1| pyridoxal phosphate enzyme, YggS family [Pasteurella bettyae CCUG
2042]
gi|386903002|gb|EIJ67823.1| pyridoxal phosphate enzyme, YggS family [Pasteurella bettyae CCUG
2042]
Length = 232
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G LQSNK + + N D ++ + KIA+ L++ + + PL VL+Q+N
Sbjct: 74 DIEWHFIGPLQSNKTRLV---AENFDWMQTLDRNKIASRLNEQRP-VNKAPLNVLIQINI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI-GMPDYTSTPENFRTLLNCRAEVC 150
S E SKSGI P + + + ++ P+L GLM I D E T +N
Sbjct: 130 SDESSKSGIQPDEMITLAKFIK-NLPHLRLRGLMAIPAATDNIVEQEQAFTAMNQLLIKL 188
Query: 151 KALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
K E Q + LSMGM+ D AI+ GST VRIG+ IFG R Y
Sbjct: 189 KQ-AFPEQQIDTLSMGMTDDMASAIKCGSTMVRIGTAIFGHRNY 231
>gi|74318436|ref|YP_316176.1| hypothetical protein Tbd_2418 [Thiobacillus denitrificans ATCC
25259]
gi|74057931|gb|AAZ98371.1| Protein of unknown function UPF0001 [Thiobacillus denitrificans
ATCC 25259]
Length = 246
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ WHF+G +QSNK + + N V V KIA L A LG PL V ++VN S
Sbjct: 91 LDWHFIGPIQSNKTRPI---AENFGWVHSVDRLKIAQRL-SAQRPLGLPPLNVCIEVNVS 146
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVC 150
GE SK G P + +VE V R P L G+MTI P D+ + FR L E+
Sbjct: 147 GEASKGGASPDALPELVEAV-ARLPGLRLRGMMTIPAPTHDFDAQRAAFRRL----RELF 201
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
L +SMGMS D E AI G+T VR+G+ +FG R+Y +
Sbjct: 202 DGLRERHALDTMSMGMSADLEAAILEGATIVRVGTALFGERKYPR 246
>gi|409197678|ref|ZP_11226341.1| hypothetical protein MsalJ2_11614 [Marinilabilia salmonicolor JCM
21150]
Length = 224
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 23/187 (12%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +DK +LP+DI+WH +GHLQ NK K + P + ++ GV + ++ +AV+
Sbjct: 48 KVQELVDKQESLPKDIEWHMIGHLQRNKVKYI---APFVSLIHGVDSLRLL----RAVNK 100
Query: 78 LGRKPLKV---LVQVNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIGMPDYT 133
G K +V L+Q++ + EE+K G+D ++E + N+E GLM GM +T
Sbjct: 101 EGAKSERVIPCLLQMHIASEETKFGLDEDELFQLLESEDYQKFGNVEIRGLM--GMATFT 158
Query: 134 STPE----NFRTLLNCRAEVCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGST 186
E FRTL N V K +D+ E LSMGMSGD++ A+ GS VRIGS+
Sbjct: 159 DDKEKIAGEFRTLKNSFDRVKKKY--FKDRKEFSFLSMGMSGDYDIAVAEGSNMVRIGSS 216
Query: 187 IFGPREY 193
IFG R Y
Sbjct: 217 IFGERNY 223
>gi|194290665|ref|YP_002006572.1| hypothetical protein RALTA_A2580 [Cupriavidus taiwanensis LMG
19424]
gi|193224500|emb|CAQ70511.1| Conserved hypothetical protein, UPF0001 family; putative racemase
[Cupriavidus taiwanensis LMG 19424]
Length = 229
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++WHF+G LQSNK + + + D V + +IA L A G PL+V +QVN S
Sbjct: 76 LQWHFIGPLQSNKTRPV---AEHFDWVHSIERLRIAERL-SAQRPAGMTPLQVCIQVNIS 131
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE-NFRTLLNCRA--EV 149
GE SKSG+ P+ + H P L GLM I P+ P R RA +
Sbjct: 132 GEASKSGVAPAEVPALA-HAVAALPGLRLRGLMAI--PEPADDPAAQRRPFAAMRAMLQA 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+A G+ D LSMGMSGD E AI G+T VRIG+ IFG R
Sbjct: 189 LRADGL--DLDTLSMGMSGDMEAAIAEGATLVRIGTAIFGAR 228
>gi|407778545|ref|ZP_11125808.1| hypothetical protein NA2_11225 [Nitratireductor pacificus pht-3B]
gi|407299622|gb|EKF18751.1| hypothetical protein NA2_11225 [Nitratireductor pacificus pht-3B]
Length = 220
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ +G LQSNKA V D++E V EKIA L + GR P ++ VQVNT
Sbjct: 75 DIELRLIGPLQSNKAAD---AVALFDVIESVDREKIAAALAGEIKKQGRSP-RLYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K+GIDP + V H R L GLM I D + P +F L +
Sbjct: 131 GLEPQKAGIDPRETVAFVSHCR-DVHGLAIEGLMCIPPFDENAGP-HFALL--------E 180
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L D + SMGMSGD+E+AI G+TSVR+GS IFG R
Sbjct: 181 KLAREADVAKCSMGMSGDYEKAIAFGATSVRVGSAIFGAR 220
>gi|85858964|ref|YP_461166.1| alanine racemase [Syntrophus aciditrophicus SB]
gi|85722055|gb|ABC76998.1| alanine racemase, N-terminal domain protein [Syntrophus
aciditrophicus SB]
Length = 232
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
+WH +GHLQ+NKAK V DMV+ V ++A L++ GR L VL++VN+ G
Sbjct: 76 QWHMIGHLQTNKAKY---AVRLFDMVQSVDRLELAIELERRARAAGRV-LPVLIEVNSGG 131
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEV 149
E +KSG+ P ++ + L N+ GLMT MP + PE F L R +
Sbjct: 132 ELTKSGVAPEEAESLIRSIAL-LENIAIEGLMT--MPPWFENPETARPYFAALRTLRDRI 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
ELSMGM+ D+E AIE G+T VRIG IFG R
Sbjct: 189 AAERIDRVSLRELSMGMTDDYEVAIEEGATIVRIGRGIFGER 230
>gi|361128536|gb|EHL00468.1| putative UPF0001 protein [Glarea lozoyensis 74030]
Length = 319
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 95/176 (53%), Gaps = 26/176 (14%)
Query: 37 FVGHLQS--NKAKTLLGG------VPNLDMVEGVGNEKIANHLDKAVSNLGRK------P 82
VG LQS + GG +PNL V + + K A L NLGR+ P
Sbjct: 15 LVGALQSVSQRIAKSAGGRNSTSQIPNLFCVSSIDSSKKATQL-----NLGRESHPDLPP 69
Query: 83 LKVLVQVNTSGEESKSGIDPSS-CLGIVEHVRLRCPNLEFSGLMTIGMPDYT------ST 135
L V +Q+NTSGEESKSG+ P + + +++ CP+L GLMTIG +
Sbjct: 70 LNVHIQLNTSGEESKSGVSPGTPATELCQYILDNCPSLNLLGLMTIGAIARSKEMKEGEE 129
Query: 136 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+F+ L + R + K L + + ELSMGMS DFE AIEMGS VR+GSTIFG R
Sbjct: 130 NEDFKVLKDERDRLEKELKGLKGKLELSMGMSEDFEGAIEMGSDEVRVGSTIFGVR 185
>gi|154488149|ref|ZP_02029266.1| hypothetical protein BIFADO_01720 [Bifidobacterium adolescentis
L2-32]
gi|154083622|gb|EDN82667.1| pyridoxal phosphate enzyme, YggS family [Bifidobacterium
adolescentis L2-32]
Length = 272
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 30 PEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
E I +H +G LQSNK +L P +D +E V + +A + + G + VL++V
Sbjct: 110 AEHIPFHLIGQLQSNKIGKVL---PVVDTIESVDSIDLAEKISRRAVARG-ITVGVLLEV 165
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRA 147
N SGEESKSG DP+ + I + + +E GLMTIG + D T F L R
Sbjct: 166 NESGEESKSGCDPAHAIRIAQKIGT-LDGIELQGLMTIGAHVHDETVIRRGFSHLRKTRD 224
Query: 148 EVCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + D+C ELSMGM+GD E AI GST VR+G+ IFG R +
Sbjct: 225 LILASGEPGTDRCRELSMGMTGDMELAIAEGSTIVRVGTAIFGERAF 271
>gi|365121999|ref|ZP_09338907.1| YggS family pyridoxal phosphate enzyme [Tannerella sp.
6_1_58FAA_CT1]
gi|363643544|gb|EHL82859.1| YggS family pyridoxal phosphate enzyme [Tannerella sp.
6_1_58FAA_CT1]
Length = 223
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 14/172 (8%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LPEDI+WHF+GHLQ+NK K + VP + M+ + K+ ++K N+GR + L+Q
Sbjct: 59 LPEDIEWHFIGHLQTNKVKQI---VPFVSMIHSADSPKLLQEINKTAENVGR-VVSCLLQ 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTS----TPENFRTLL 143
++ + EESK G C + + ++ F G+M GM +T+ F +L
Sbjct: 115 IHIAREESKFGFSFEECRDYLRSGAWKDLRHVRFCGVM--GMATFTNDCKQIESEFLSLR 172
Query: 144 NCRAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ E+ K ED CE+SMGMS D+ A++ GST VR+GS IFG R Y
Sbjct: 173 SFFDEIKKDY-FPEDSSFCEISMGMSDDYLLAVKAGSTLVRVGSRIFGERVY 223
>gi|229829073|ref|ZP_04455142.1| hypothetical protein GCWU000342_01158 [Shuttleworthia satelles DSM
14600]
gi|229792236|gb|EEP28350.1| hypothetical protein GCWU000342_01158 [Shuttleworthia satelles DSM
14600]
Length = 235
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD-KAVSNLGRKPLKVL 86
+LP DI+WH +GHLQ NK K L ++ ++ V ++A ++ +A N ++ + +L
Sbjct: 66 HLPGDIRWHMIGHLQRNKVKYLARRADSIALIHSVDTYRLAEEINIQAKKN--KRIIDIL 123
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
V+VN + E+SK GI L +++ + + GLMT P+ + EN + +
Sbjct: 124 VEVNIADEDSKFGISREDALSLIQDI-AGLDGIHIRGLMT-SAPNVKNAEENRAYFRSIK 181
Query: 147 AEVCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
A D E LSMGM+ D++ AIE GST VR+G+ IFG R+Y +K
Sbjct: 182 ALAVDINSRNIDNVEMDILSMGMTNDYQIAIEEGSTMVRVGTAIFGARDYHRK 234
>gi|392408757|ref|YP_006445364.1| pyridoxal phosphate enzyme, YggS family [Desulfomonile tiedjei DSM
6799]
gi|390621893|gb|AFM23100.1| pyridoxal phosphate enzyme, YggS family [Desulfomonile tiedjei DSM
6799]
Length = 228
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNL-DMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQV 89
E ++ H +GHLQ NKA G ++ + V+ V NE++A L+ + GR+ + VL+QV
Sbjct: 70 ETVEHHMIGHLQRNKA----GKAADIFETVQTVDNERVAAALNTRCQDNGRR-MGVLIQV 124
Query: 90 NTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
N + E KSG+ + +++ L+ P LE GLMT MP + PE R E+
Sbjct: 125 NLAREPQKSGLPEEQVAPLADYI-LKLPRLELKGLMT--MPPFFDDPERARPYFAGLREL 181
Query: 150 CKALG----MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ L ++ D ELSMGM+GDFE A+E G+T VRIG+ IFG R+
Sbjct: 182 RERLERDGVLSPDMKELSMGMTGDFETAVEEGATLVRIGTAIFGERQ 228
>gi|89091926|ref|ZP_01164881.1| hypothetical protein MED92_07161 [Neptuniibacter caesariensis]
gi|89083661|gb|EAR62878.1| hypothetical protein MED92_07161 [Oceanospirillum sp. MED92]
Length = 236
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WHF+G LQSNK +T+ N D + V KIA L A PL + +QVN
Sbjct: 73 DICWHFIGPLQSNKTRTV---AENFDWMHTVDRLKIAQRL-SAQRPEQLAPLNICIQVNI 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP----ENFRTLLNCRA 147
S E+SKSG P + + + + PN+ GLM I P +S P E F+ + +
Sbjct: 129 SNEDSKSGCSPEQVAELADQIS-QLPNISLRGLMAI--PKASSDPKEQAEAFQKMRLLQL 185
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E+ ++ + LSMGMSGD +AI GST VR+G+ IFGPR
Sbjct: 186 ELQQSHPQLD---TLSMGMSGDMNEAISAGSTIVRVGTAIFGPR 226
>gi|15889996|ref|NP_355677.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|15157965|gb|AAK88462.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 220
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKA V D+VE + EKIA L + + GR L+ VQVNT
Sbjct: 75 DIELHLIGPLQSNKAAD---AVALFDVVESIDREKIARALSEECARQGRS-LRFYVQVNT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVR--LRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEV 149
E K+GIDP + V R L+ P GLM I P P LL A
Sbjct: 131 GLEPQKAGIDPRETVAFVAFCRDELKLP---VEGLMCI--PPAEENPGPHFALLAKLAGQ 185
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
C G+ + LSMGMSGDFE A+E G+TSVR+GS IFG R
Sbjct: 186 C---GLEK----LSMGMSGDFETAVEFGATSVRVGSAIFGSR 220
>gi|313200408|ref|YP_004039066.1| alanine racemase domain-containing protein [Methylovorus sp. MP688]
gi|312439724|gb|ADQ83830.1| alanine racemase domain protein [Methylovorus sp. MP688]
Length = 233
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 93/172 (54%), Gaps = 12/172 (6%)
Query: 24 IDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
++K +L +D I+WHF+G +QSNK + + + V GV KIA L+ A
Sbjct: 63 LNKQSLLQDLPIEWHFIGPIQSNKTQPI---AQHFSWVHGVDRLKIAERLN-AARPAELP 118
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENF 139
PL++ +QVN S EESKSGI P + + + P L+ GLM I P D F
Sbjct: 119 PLQICLQVNVSHEESKSGIAPEEAYALASAI-TQLPRLQLRGLMAIPAPTPDMELQRAQF 177
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++ + + G+A D LS+GMS DF AI G+T VR+GS IFGPR
Sbjct: 178 R-MVRALYDALRQQGIALD--TLSIGMSEDFPVAIGEGATIVRVGSAIFGPR 226
>gi|226324964|ref|ZP_03800482.1| hypothetical protein COPCOM_02756 [Coprococcus comes ATCC 27758]
gi|225206312|gb|EEG88666.1| pyridoxal phosphate enzyme, YggS family [Coprococcus comes ATCC
27758]
Length = 232
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 100/183 (54%), Gaps = 12/183 (6%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +KY+ +P+DI W +GHLQ NK K + + +++ V + ++A +DK +
Sbjct: 56 KVQELDEKYDIMPKDIHWQMIGHLQRNKVKYI---IDKAELIHSVDSIRLAETIDKEAAK 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
G + VL++VN + E++K G+ P + + H +R +++ GLMTI + PE
Sbjct: 113 KG-IVVNVLLEVNMAKEDTKFGLMPEEVMDFI-HEIVRFQHIKVQGLMTIA--PFVENPE 168
Query: 138 ----NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+F L ++ K + LSMGM+ DFE AIE G+T VRIG+ IFG R Y
Sbjct: 169 ENRIHFANLRKLSVDIAKEKVDNVNMSILSMGMTNDFEVAIEEGATMVRIGTAIFGERNY 228
Query: 194 AKK 196
A +
Sbjct: 229 AHQ 231
>gi|153808274|ref|ZP_01960942.1| hypothetical protein BACCAC_02562 [Bacteroides caccae ATCC 43185]
gi|423219018|ref|ZP_17205514.1| YggS family pyridoxal phosphate enzyme [Bacteroides caccae
CL03T12C61]
gi|149129177|gb|EDM20393.1| pyridoxal phosphate enzyme, YggS family [Bacteroides caccae ATCC
43185]
gi|392625784|gb|EIY19840.1| YggS family pyridoxal phosphate enzyme [Bacteroides caccae
CL03T12C61]
Length = 222
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 13/182 (7%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ KY +LP+DI+WHF+GHLQSNK K + +P + M+ G+ K+ ++K
Sbjct: 47 KVQEMTAKYESLPKDIEWHFIGHLQSNKIKYM---IPYVAMIHGIDTYKLLAEVNKQAVK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIGMPDYTSTP 136
GR + L+Q++ + EE+K G P C ++ + ++ GLM GM T
Sbjct: 104 AGR-IINCLLQIHVAQEETKFGFSPDECKDMLNTGEWKELTHVRICGLM--GMASNTDNV 160
Query: 137 ENFRT---LLNCRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
E LL+ + K A+ ELSMGMS D+ +AI GST VR+GS IFG R
Sbjct: 161 EQINREFCLLDRLFKEIKTTWFADSDAFRELSMGMSHDYHEAIAAGSTLVRVGSKIFGER 220
Query: 192 EY 193
Y
Sbjct: 221 NY 222
>gi|119026489|ref|YP_910334.1| hypothetical protein BAD_1471 [Bifidobacterium adolescentis ATCC
15703]
gi|118766073|dbj|BAF40252.1| hypothetical protein BAD_1471 [Bifidobacterium adolescentis ATCC
15703]
Length = 272
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Query: 31 EDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN 90
E I +H +G LQSNK +L P +D +E V + +A + + G + VL++VN
Sbjct: 111 EHIPFHLIGQLQSNKIGKVL---PVVDTIESVDSIDLAEKISRRAVARG-ITVGVLLEVN 166
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAE 148
SGEESKSG DP+ + I + + +E GLMTIG + D T F L R
Sbjct: 167 ESGEESKSGCDPAHAIRIAQKIGT-LDGIELQGLMTIGAHVHDETVIRRGFSHLRKTRDL 225
Query: 149 VCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + D+C ELSMGM+GD E AI GST VR+G+ IFG R +
Sbjct: 226 ILASGEPGTDRCRELSMGMTGDMELAIAEGSTIVRVGTAIFGERAF 271
>gi|386078089|ref|YP_005991614.1| alanine racemase domain protein YggS [Pantoea ananatis PA13]
gi|354987270|gb|AER31394.1| alanine racemase domain protein YggS [Pantoea ananatis PA13]
Length = 235
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 24/176 (13%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
+ WHF+G LQSNK++ + + V +KIA L D+ +L PL VL+QVN
Sbjct: 75 LTWHFIGPLQSNKSRLV---AEHFAWCHTVDRQKIAQRLNDQRPEHL--PPLNVLIQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
S E SKSGI + G+ + + L P L GLM I P+ E+++ L VC+
Sbjct: 130 SDENSKSGIMLEAVAGLAQDI-LTMPRLRLRGLMAIPAPE-----EDYQRQL----AVCQ 179
Query: 152 ALGMAEDQCE--------LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
+ A DQ + LS+GMS D E AI GST VRIG+ IFG R+Y + Q
Sbjct: 180 QMADAFDQLKQQYSDVDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYTQPSQQ 235
>gi|291618773|ref|YP_003521515.1| hypothetical protein PANA_3220 [Pantoea ananatis LMG 20103]
gi|378765822|ref|YP_005194283.1| alanine racemase [Pantoea ananatis LMG 5342]
gi|386017026|ref|YP_005935324.1| hypothetical protein PAJ_2448 [Pantoea ananatis AJ13355]
gi|291153803|gb|ADD78387.1| YggS [Pantoea ananatis LMG 20103]
gi|327395106|dbj|BAK12528.1| hypothetical UPF0001 protein YggS [Pantoea ananatis AJ13355]
gi|365185296|emb|CCF08246.1| alanine racemase domain protein [Pantoea ananatis LMG 5342]
Length = 235
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 24/176 (13%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
+ WHF+G LQSNK++ + + V +KIA L D+ +L PL VL+QVN
Sbjct: 75 LTWHFIGPLQSNKSRLV---AEHFAWCHTVDRQKIAQRLNDQRPEHL--PPLNVLIQVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
S E SKSGI + G+ + + L P L GLM I P+ E+++ L VC+
Sbjct: 130 SDENSKSGIMLEAVAGLAQDI-LTMPRLRLRGLMAIPAPE-----EDYQRQL----AVCQ 179
Query: 152 ALGMAEDQCE--------LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
+ A DQ + LS+GMS D E AI GST VRIG+ IFG R+Y + Q
Sbjct: 180 QMADAFDQLKQQYSDVDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYTQPSQQ 235
>gi|257457757|ref|ZP_05622918.1| pyridoxal phosphate enzyme, YggS family [Treponema vincentii ATCC
35580]
gi|257444807|gb|EEV19889.1| pyridoxal phosphate enzyme, YggS family [Treponema vincentii ATCC
35580]
Length = 240
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 97/183 (53%), Gaps = 17/183 (9%)
Query: 19 KLLRFIDKYNLPEDI--KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ DKY + HF+GHLQSNK K ++ V ++ + N A L++ ++
Sbjct: 59 KVQELHDKYEALSAVPHTAHFIGHLQSNKIKEVIRYV---QCIQSIDNLDTAQKLEQRLA 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
GR +++LVQVNTS EESK G P +V+ + P+L G MTIG+ ++
Sbjct: 116 QEGRS-IEILVQVNTSAEESKFGCKPGDAENLVKAIAA-LPHLNIRGFMTIGL--FSGEE 171
Query: 137 ENFRTLLNCRAEVCKALG------MAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ R C V K + ++ D LSMGMSGD E AIE GST +RIG+ +FG
Sbjct: 172 DKVRACFRCLKHVQKQVAEMKLPNVSTDV--LSMGMSGDLEIAIEEGSTMLRIGTAVFGE 229
Query: 191 REY 193
R Y
Sbjct: 230 RHY 232
>gi|395236299|ref|ZP_10414496.1| hypothetical protein A936_21507 [Enterobacter sp. Ag1]
gi|394728930|gb|EJF28950.1| hypothetical protein A936_21507 [Enterobacter sp. Ag1]
Length = 234
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
++WHF+G LQSNK++ + N D V KIA+ L ++ S L PL VL+Q+N
Sbjct: 77 LEWHFIGPLQSNKSRLV---AENFDWCHTVDRLKIASRLSEQRPSTL--PPLNVLIQINI 131
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR--AEV 149
S E SKSGI S + V P L GLM I P+ P+ R L CR AE
Sbjct: 132 SDENSKSGIALSELEQLAAEVAA-LPGLTLRGLMAIPAPE----PDYERQLTVCRKMAEA 186
Query: 150 CKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 196
C AL + LS+GM+ D E AI GST VRIG+ IFG R+Y +
Sbjct: 187 CNALKARFTTIDTLSLGMTDDMEAAIAAGSTMVRIGTAIFGARDYPAR 234
>gi|451979738|ref|ZP_21928150.1| conserved hypothetical protein, UPF0001 [Nitrospina gracilis 3/211]
gi|451763017|emb|CCQ89347.1| conserved hypothetical protein, UPF0001 [Nitrospina gracilis 3/211]
Length = 231
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 86/162 (53%), Gaps = 7/162 (4%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D +WHF+GHLQ NK K ++G D++ V + ++A L+ G L+QVN
Sbjct: 73 DCRWHFIGHLQKNKVKYVVG---RFDLIHSVDSIELAEKLNAESEKQG-MVTNALIQVNV 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAEV 149
SGE SK G+DP LG + + GLMTI PD ++F +L R +
Sbjct: 129 SGEASKYGVDPDH-LGDLLRRSGALSGIAVKGLMTIPPYTPDAEEARKHFVSLRTLRDRM 187
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
C+ ELSMGMS DFE AIE G+T VR+G+ +FG R
Sbjct: 188 CEKAIPGVTLTELSMGMSHDFEIAIEEGATWVRVGTALFGER 229
>gi|148550169|ref|YP_001270271.1| alanine racemase domain-containing protein [Pseudomonas putida F1]
gi|148514227|gb|ABQ81087.1| alanine racemase domain protein [Pseudomonas putida F1]
Length = 228
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK K + + D V V KIA L + G PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCKA 152
+SKSG P+ + + V PNL GLM I P D + F +L + +
Sbjct: 132 DSKSGCTPADLPALAKAVAA-LPNLRLRGLMAIPKPTEDRATQEAAFASLRKLQ----EG 186
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
LG D LSMGMS D E AI G+T VRIG+ +FG R+Y
Sbjct: 187 LGFGLD--TLSMGMSHDLEAAIAQGATWVRIGTALFGARDY 225
>gi|389690652|ref|ZP_10179545.1| pyridoxal phosphate enzyme, YggS family [Microvirga sp. WSM3557]
gi|388588895|gb|EIM29184.1| pyridoxal phosphate enzyme, YggS family [Microvirga sp. WSM3557]
Length = 227
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++ H +G LQSNKAK V D++ + +A L K ++ GRKP ++LVQVNT
Sbjct: 77 DVELHMIGPLQSNKAKE---AVELFDVIHTLDRPSLAEALAKEIAKQGRKP-RLLVQVNT 132
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K G+ P+ +E R R LE GLM I P P LLN + K
Sbjct: 133 GEEPQKGGVIPAEVDAFLEACRGRY-GLEIDGLMCI--PPAEDAPSPHFALLNT---IAK 186
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
G+ LSMGMS DF+ AI++G+T VR+GS IFG R AK
Sbjct: 187 RHGLKL----LSMGMSADFDAAIQLGATHVRVGSAIFGARPKAK 226
>gi|288802419|ref|ZP_06407858.1| pyridoxal phosphate enzyme, YggS family [Prevotella melaninogenica
D18]
gi|288334947|gb|EFC73383.1| pyridoxal phosphate enzyme, YggS family [Prevotella melaninogenica
D18]
Length = 223
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DI+WHF+GHLQ+NK K + P + MVE V + K+ ++K + R + VL++
Sbjct: 59 LPKDIEWHFIGHLQTNKVKYI---APYISMVEAVDSLKLLKEINKQAAKYNR-VINVLLE 114
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIG--MPDYTSTPENFRTLLNC 145
++ + EE+K G P +C ++E + N+ SGLM + + D + +
Sbjct: 115 LHIAEEETKYGFTPDACRELLESGEWKELKNVHISGLMMMASNVDDRNQIKKEMMLAADL 174
Query: 146 RAEVCKALGMAEDQ--CELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
E+ KA A+D E S GMS D++ A+E ST VR+G+TIFGPR Y
Sbjct: 175 FDEL-KAKYFADDPEFKERSWGMSHDYDIAVECRSTMVRVGTTIFGPRVY 223
>gi|153953817|ref|YP_001394582.1| hypothetical protein CKL_1192 [Clostridium kluyveri DSM 555]
gi|219854433|ref|YP_002471555.1| hypothetical protein CKR_1090 [Clostridium kluyveri NBRC 12016]
gi|146346698|gb|EDK33234.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219568157|dbj|BAH06141.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 222
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 98/182 (53%), Gaps = 11/182 (6%)
Query: 19 KLLRFIDKY-NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDK--AV 75
K+ F+ K NLPEDI+WHF+GHLQ NK K ++G V + ++GV K+ L+K
Sbjct: 48 KVQEFVSKEPNLPEDIRWHFIGHLQRNKVKYIVGKVELIHSLDGV---KLLQELEKHYKA 104
Query: 76 SNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMT-IGMPDYTS 134
NL VL+Q+N EE+K+GI + ++E L C N++ GLM+ I + D S
Sbjct: 105 KNL---TANVLIQINIGCEENKTGIYLENLEELIEACEL-CTNVKVKGLMSVIPIGDEKS 160
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
FR + ++ LSMGM+ D+ A+E GST VRIG IFG R Y
Sbjct: 161 CRNYFRKMKYIFQDLKNKKFTNISMDILSMGMTHDYGVAVEEGSTLVRIGEGIFGKRNYN 220
Query: 195 KK 196
K
Sbjct: 221 NK 222
>gi|398800132|ref|ZP_10559408.1| pyridoxal phosphate enzyme, YggS family [Pantoea sp. GM01]
gi|398096336|gb|EJL86661.1| pyridoxal phosphate enzyme, YggS family [Pantoea sp. GM01]
Length = 235
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
D++WHF+G LQSNK++ + N + E+IA L D+ ++L PL VL+QVN
Sbjct: 74 DLQWHFIGPLQSNKSRLV---AENFAWCHTIDRERIAQRLNDQRPASL--PPLNVLIQVN 128
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVC 150
S E SKSGI + + +++ P+L GLM I P+ E R L C+
Sbjct: 129 ISDENSKSGIMLEALPELAQYIAA-LPHLRLRGLMAIPAPES----EYDRQLAVCQQMAS 183
Query: 151 KALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQQN 199
+ +D + LS+GMS D + AI GST VRIG+ +FG R+YA+ Q
Sbjct: 184 AFHALQQDYPDVDTLSLGMSDDMDAAIAAGSTMVRIGTAVFGARDYARPTQQ 235
>gi|386014364|ref|YP_005932641.1| Alanine racemase domain protein [Pseudomonas putida BIRD-1]
gi|313501070|gb|ADR62436.1| Alanine racemase domain protein [Pseudomonas putida BIRD-1]
Length = 228
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK K + + D V V KIA L + G PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCKA 152
+SKSG P+ + + V PNL GLM I P D + F +L + +
Sbjct: 132 DSKSGCTPADLPALAKAVAA-LPNLRLRGLMAIPEPTEDRATQEAAFASLRKLQ----EG 186
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
LG D LSMGMS D E AI G+T VRIG+ +FG R+Y
Sbjct: 187 LGFGLD--TLSMGMSHDLEAAIAQGATWVRIGTALFGARDY 225
>gi|253690200|ref|YP_003019390.1| alanine racemase domain-containing protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756778|gb|ACT14854.1| alanine racemase domain protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 280
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++W +GHLQ+NKAK + ++ + ++A LD+ + GR L V VQVNT
Sbjct: 96 DLQWSVIGHLQTNKAKLVARFATEFQALDSL---RLAEALDRRLQVEGRS-LDVFVQVNT 151
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT----LLNCRA 147
SGE SK G+ P ++ + L GLMT+ + ++S E R L R
Sbjct: 152 SGEASKYGLSPDDVPAFIQALPT-FSALRVRGLMTLAL--FSSEAERVRQCFVRLRQLRE 208
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + L D ELSMGMSGDFE AIE G+T VR+G IFG R
Sbjct: 209 RLQQNLPTGIDLDELSMGMSGDFEIAIEEGATVVRVGQAIFGAR 252
>gi|282859305|ref|ZP_06268418.1| pyridoxal phosphate enzyme, YggS family [Prevotella bivia
JCVIHMP010]
gi|282587930|gb|EFB93122.1| pyridoxal phosphate enzyme, YggS family [Prevotella bivia
JCVIHMP010]
Length = 227
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DI+WHF+GHLQ+NK K + VP + M+E V + K+ ++K + R + VL+
Sbjct: 62 TLPKDIEWHFIGHLQTNKVKYI---VPYISMIEAVDSVKLLREIEKQAAKHDR-VVNVLL 117
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+++ + EESK G C ++E + P++ SGLM + + D + + +
Sbjct: 118 ELHIAQEESKYGFSFDDCRALLESGEWKKMPHVHISGLMMMASNVGDEAQIRKEMLSAAD 177
Query: 145 CRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
EV K A+D E S GMS D++ A++ ST VRIG+TIFGPR Y
Sbjct: 178 FFDEV-KQKYFADDSAFKERSWGMSHDYQIAVQCRSTMVRIGTTIFGPRIY 227
>gi|239617209|ref|YP_002940531.1| alanine racemase domain protein [Kosmotoga olearia TBF 19.5.1]
gi|239506040|gb|ACR79527.1| alanine racemase domain protein [Kosmotoga olearia TBF 19.5.1]
Length = 218
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Query: 34 KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG 93
+WH +GHLQ NK K V DM++ V + KIAN ++K + G K + VL++VN+
Sbjct: 63 QWHMIGHLQKNKVKK---AVQIFDMIQTVDSVKIANEINKRAAQFG-KVMPVLIEVNSGR 118
Query: 94 EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKAL 153
EE K+G+ P +VE + + N+ GLMT+G PE R + E+ + L
Sbjct: 119 EEQKAGVLPEDVFRLVEEIS-KLENIRIEGLMTMG--PVVDAPEELRPYFSLTRELFENL 175
Query: 154 GMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ + LSMGMS ++ AI+ G+ +R+G+ +FGPR
Sbjct: 176 SREKLPGVEMKWLSMGMSDSYKIAIKEGANMIRLGTILFGPR 217
>gi|422341383|ref|ZP_16422324.1| hypothetical protein HMPREF9353_00987 [Treponema denticola F0402]
gi|325474954|gb|EGC78140.1| hypothetical protein HMPREF9353_00987 [Treponema denticola F0402]
Length = 246
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 19 KLLRFIDKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ +KY +K HF+GHLQ+NK K + + D +E V +A L K +
Sbjct: 59 KVQELCEKYEPLSSVKHETHFIGHLQTNKIKDV---IKYADCIESVDRLDLAEKLSKRLE 115
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTS 134
+ G K + +L+QVNTS EESK G P L + E + + P L+ GLMTIG+ +
Sbjct: 116 SEG-KTMDILIQVNTSQEESKFGCKPEEALSLTEKI-AKLPCLKIKGLMTIGLFSDNMDK 173
Query: 135 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F+ L R E+ + +SMGM+GD E AIE GST +R+G+ IFG R Y
Sbjct: 174 VRLCFKLLQKIRKEITEKNIPNVSMEVVSMGMTGDLEVAIEEGSTLIRVGTAIFGKRNY 232
>gi|297617004|ref|YP_003702163.1| alanine racemase domain-containing protein [Syntrophothermus
lipocalidus DSM 12680]
gi|297144841|gb|ADI01598.1| alanine racemase domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 233
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 23 FIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP 82
F+ KY ++WHF+GHLQ+NK K ++G ++ + ++A ++D LG
Sbjct: 66 FLPKYKELPHLQWHFIGHLQTNKVKDVIGKAC---LIHSLDRWRLAEYIDGKAKLLGLAE 122
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFR 140
+ VL++VN SGE SK G+ PS ++ V R + GLMT+ + D F+
Sbjct: 123 VDVLLEVNVSGERSKYGLLPSDVPAFLDAVE-RLERVRVRGLMTVAPQVDDPELARPVFK 181
Query: 141 TLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
L + ++ K + LSMGM+ DFE A+E GS VR+G+ IFG R
Sbjct: 182 KLRSIFEDIKKRQYRNTEMLYLSMGMTQDFEVAVEEGSNMVRVGTAIFGAR 232
>gi|424902971|ref|ZP_18326484.1| hypothetical protein A33K_14340 [Burkholderia thailandensis MSMB43]
gi|390930844|gb|EIP88245.1| hypothetical protein A33K_14340 [Burkholderia thailandensis MSMB43]
Length = 232
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 24 IDKYNLPEDIK----WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLD-KAVSNL 78
IDK + D++ WHF+G LQSNK + + D V V KIA L + ++L
Sbjct: 63 IDKIDTLADLRAELEWHFIGPLQSNKTRPV---AERFDWVHTVDRLKIAQRLSGQRPAHL 119
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 138
PL V VQVN SGE SKSG+ P+ + P L GLM I P+ + PE
Sbjct: 120 --PPLNVCVQVNISGEASKSGVAPADAAELAR-AVAALPALRLRGLMAI--PEPATDPEA 174
Query: 139 FRT---LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
R L+ E +A G+A D LSMGMS D E A+ G+T VRIG+ IFG R+YA
Sbjct: 175 KRAPHRALHALLEQLRAGGLALDT--LSMGMSDDLEAAVAEGATIVRIGTAIFGARDYA 231
>gi|417858286|ref|ZP_12503343.1| hypothetical protein Agau_C100862 [Agrobacterium tumefaciens F2]
gi|338824290|gb|EGP58257.1| hypothetical protein Agau_C100862 [Agrobacterium tumefaciens F2]
Length = 219
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+ H +G LQSNKA V D+++ + EKIA L + + GR L+ VQVNT
Sbjct: 74 DIELHLIGPLQSNKASD---AVALFDVIQSIDREKIARALSEECAKQGRS-LRFYVQVNT 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
E K+GIDP + V R L GLM I P P LL A++ K
Sbjct: 130 GLEPQKAGIDPRETVAFVALCRDEL-KLPVEGLMCI--PPAEENPGPHFALL---AKLAK 183
Query: 152 ALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G+ + LSMGMSGDFE A+E G+TSVR+GS IFG R
Sbjct: 184 QCGLEK----LSMGMSGDFETAVEFGATSVRVGSAIFGAR 219
>gi|209694136|ref|YP_002262064.1| membrane protein, related to K+ transport [Aliivibrio salmonicida
LFI1238]
gi|208008087|emb|CAQ78228.1| membrane protein, related to K+ transport [Aliivibrio salmonicida
LFI1238]
Length = 255
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 13 YKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL- 71
Y + + + + K + +++WHF+G +QSNK + + + D V + KIA L
Sbjct: 58 YVQEGVDKVHYFQKNHSNIELEWHFIGPIQSNKTRPI---AEHFDWVHSIDRLKIAQRLN 114
Query: 72 DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI--GM 129
++ S+LG L VL+QVN S E+SKSG + + + + PNL GLM+I +
Sbjct: 115 EQRPSDLGE--LNVLIQVNISSEDSKSGTTANEVMSLAAAIHA-MPNLTLRGLMSIPANV 171
Query: 130 PDYTSTPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIF 188
+Y F+ L A + L Q + LSMGMSGD + AIE GST VRIG+ IF
Sbjct: 172 SNYEEQLAAFKQL----ASIQNQLEAQYPQVDTLSMGMSGDIDAAIEAGSTMVRIGTAIF 227
Query: 189 GPREYAKK 196
G R Y +
Sbjct: 228 GARNYTNE 235
>gi|365874695|ref|ZP_09414227.1| alanine racemase [Elizabethkingia anophelis Ag1]
gi|442589079|ref|ZP_21007888.1| alanine racemase [Elizabethkingia anophelis R26]
gi|365757468|gb|EHM99375.1| alanine racemase [Elizabethkingia anophelis Ag1]
gi|442561317|gb|ELR78543.1| alanine racemase [Elizabethkingia anophelis R26]
Length = 244
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 18/166 (10%)
Query: 36 HFVGHLQSNKAKTLL----GGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
HF+GHLQ+NK K +L + +LD ++ EK+ L+ + + VL+Q+NT
Sbjct: 78 HFIGHLQTNKIKDILKYDVSCIQSLDRIDLA--EKLQQRLEAE-----DRTIDVLIQINT 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
SGEESK GI P L +V+ V L+ GLMTIG+ +++ E RT E+ +
Sbjct: 131 SGEESKFGIHPEKALELVKQVS-ELNALKIKGLMTIGL--FSAETEKVRTCFRLLKELQQ 187
Query: 152 ALGMAE----DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ + ELSMGMSGD E A+E G+T VR+G+ IFG R Y
Sbjct: 188 QIISHNIPGVEMNELSMGMSGDLETAVEEGATIVRVGTAIFGQRIY 233
>gi|260587699|ref|ZP_05853612.1| pyridoxal phosphate enzyme, YggS family [Blautia hansenii DSM
20583]
gi|260541964|gb|EEX22533.1| pyridoxal phosphate enzyme, YggS family [Blautia hansenii DSM
20583]
Length = 231
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 17/172 (9%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP + WH +GHLQ NK K + V ++ V + ++A + KA + K+L++
Sbjct: 68 LPSALHWHMIGHLQRNKVKYI---VDKACIIHSVDSLRLAEEISKAAQK-KQVTAKILIE 123
Query: 89 VNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLN 144
VN + EESK G+ S L ++E + L PN+ GLMTI Y PE F+ L N
Sbjct: 124 VNVAEEESKFGVRTSELLPLIEAISL-LPNIAIKGLMTIA--PYVENPEENRWIFQKLKN 180
Query: 145 CRAEVCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
++ G D LSMGM+GD+E AIE G+T VR+G+ IFG R Y
Sbjct: 181 LSIDIK---GKNFDNVTMDVLSMGMTGDYEVAIEEGATHVRVGTGIFGERNY 229
>gi|336323174|ref|YP_004603141.1| hypothetical protein Flexsi_0911 [Flexistipes sinusarabici DSM
4947]
gi|336106755|gb|AEI14573.1| protein of unknown function UPF0001 [Flexistipes sinusarabici DSM
4947]
Length = 234
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 93/173 (53%), Gaps = 19/173 (10%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
+ ++H +GHLQSNK K + G ++ V + + + K GRK +LVQVN
Sbjct: 72 EAEFHMIGHLQSNKVKYIPGV---FKLIHSVDRKSLVKEMHKRFYREGRKQ-DILVQVNL 127
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCK 151
+ EE K G++ ++ ++E++ L+C +L G M MP + PE+ R L A++ +
Sbjct: 128 ALEEQKGGVNQTNLDDLLEYI-LQCNSLNLRGFML--MPPFLENPEDNRYLF---AKMYE 181
Query: 152 ALGMAEDQCE---------LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+DQ E LSMGMS DFE A+E GS VR+GS IFG R Y K
Sbjct: 182 LFAQYKDQFEKSGTEGFDTLSMGMSADFEIAVEEGSNMVRVGSKIFGQRNYNK 234
>gi|300773349|ref|ZP_07083218.1| YggS family pyridoxal phosphate enzyme [Sphingobacterium
spiritivorum ATCC 33861]
gi|300759520|gb|EFK56347.1| YggS family pyridoxal phosphate enzyme [Sphingobacterium
spiritivorum ATCC 33861]
Length = 244
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 10/175 (5%)
Query: 25 DKYNLPEDIKW--HFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKP 82
+KY +DI HF+GHLQ+NK K LL ++ V+ + ++A L + + R
Sbjct: 65 EKYEALKDIPHVNHFIGHLQTNKVKDLLK--YDITCVQSLDRAELAQKLHQRLKAENR-T 121
Query: 83 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS--TPENFR 140
++V +QVNTS EESK G+ P + +V+ V L L+ GLMTIG+ S + FR
Sbjct: 122 IEVFIQVNTSFEESKFGVSPHKVVDLVKEVAL-LDTLKIKGLMTIGLLSTESEKVRQCFR 180
Query: 141 TLLNCRAEVCKALGMAE-DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
L + ++ AL + + ELSMGMSGD E AI G+T VR+G+ IFG R A
Sbjct: 181 LLKEIQQQII-ALDIPHVEMRELSMGMSGDLETAIAEGATIVRVGTAIFGQRPTA 234
>gi|157960955|ref|YP_001500989.1| alanine racemase domain-containing protein [Shewanella pealeana
ATCC 700345]
gi|157845955|gb|ABV86454.1| alanine racemase domain protein [Shewanella pealeana ATCC 700345]
Length = 233
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 16/169 (9%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G LQSNK K + D + V EKIA L++ + P+ V +QVN
Sbjct: 75 DIEWHFIGPLQSNKTKVV---ATLFDWMHTVEREKIAQRLNEQRPD-SMPPINVCIQVNI 130
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDY---TSTPE--NFRTLLNCR 146
S E SKSG+ + L + + + + PNL GLM I D T+T E + L N
Sbjct: 131 SQEASKSGVAANEILALADKI-AQMPNLTLRGLMAIPSADVDEQTATDEMAALQALYNQL 189
Query: 147 AEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
A+ + LS+GMS D E A+ GST VRIGS IFG R+Y+K
Sbjct: 190 AQRFDYVDT------LSVGMSNDLELAVAHGSTMVRIGSAIFGERDYSK 232
>gi|340620714|ref|YP_004739167.1| alpha/beta barrel fold protein [Zobellia galactanivorans]
gi|339735511|emb|CAZ98888.1| Alpha/beta barrel fold protein [Zobellia galactanivorans]
Length = 217
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 12/169 (7%)
Query: 29 LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQ 88
LP+DIKWH +GHLQ NK K + V D+V GV + ++ ++K L R + L+Q
Sbjct: 57 LPKDIKWHMIGHLQRNKVKYMAEFV---DLVHGVDSFRLLVEINKRAEQLNR-SIDCLLQ 112
Query: 89 VNTSGEESKSGIDP---SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNC 145
++ + E++K G++ ++ L E+ +L+ N+ GLM GM +T R
Sbjct: 113 IHIAEEDTKFGLNEEELNTLLKSDEYQQLKHVNV--VGLM--GMATFTDDETQIRREFKH 168
Query: 146 RAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ A+ +Q + LSMGMSGD++ AIE GST VRIGS+IFG R Y
Sbjct: 169 LKSIFDAIQTENEQIKILSMGMSGDYKIAIEEGSTMVRIGSSIFGKRNY 217
>gi|146328880|ref|YP_001209130.1| alanine racemase domain-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232350|gb|ABQ13328.1| alanine racemase domain protein [Dichelobacter nodosus VCS1703A]
Length = 264
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 10/163 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D+KW +GHLQ+NKAK + ++ + KIA LDK + R+ L V +QVNT
Sbjct: 101 DLKWAIIGHLQTNKAKYVARFASEFQALDSL---KIAEELDKRLQQENRQ-LDVFIQVNT 156
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEV 149
S E K GI P + V + +L GLMT+ + D + + F L R ++
Sbjct: 157 SNEPQKYGISPENAEDFVRQLEA-FRSLRLRGLMTLAIFSSDKDTVRQCFIRLRQLRDQL 215
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ + D ELSMGMSGDFE AI G+T+VR+G +FG R+
Sbjct: 216 QQ---INPDIAELSMGMSGDFELAIAEGATTVRVGQALFGARQ 255
>gi|424899508|ref|ZP_18323050.1| pyridoxal phosphate enzyme, YggS family [Prevotella bivia DSM
20514]
gi|388591708|gb|EIM31947.1| pyridoxal phosphate enzyme, YggS family [Prevotella bivia DSM
20514]
Length = 223
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DI+WHF+GHLQ+NK K + VP + M+E V + K+ ++K + R + VL+
Sbjct: 58 TLPKDIEWHFIGHLQTNKVKYI---VPYISMIEAVDSVKLLREIEKQAAKHDR-VVNVLL 113
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRL-RCPNLEFSGLMTIG--MPDYTSTPENFRTLLN 144
+++ + EESK G C ++E + P++ SGLM + + D + + +
Sbjct: 114 ELHIAQEESKYGFSFDDCRALLESGEWKKMPHVHISGLMMMASNVGDEAQIRKEMLSAAD 173
Query: 145 CRAEVCKALGMAEDQC--ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
EV K A+D E S GMS D++ A++ ST VRIG+TIFGPR Y
Sbjct: 174 FFDEV-KQKYFADDSAFKERSWGMSHDYQIAVQCRSTMVRIGTTIFGPRIY 223
>gi|94499757|ref|ZP_01306293.1| Predicted enzyme with a TIM-barrel fold protein [Bermanella
marisrubri]
gi|94427958|gb|EAT12932.1| Predicted enzyme with a TIM-barrel fold protein [Oceanobacter sp.
RED65]
Length = 238
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 94/173 (54%), Gaps = 13/173 (7%)
Query: 24 IDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV-SNLGR 80
+DK N D I+WHF+G LQSNK K + + +E +KIA L + S+L
Sbjct: 66 VDKINALSDLAIEWHFIGPLQSNKTKDVAEHFAWMHTLE---RDKIAKRLSQQRPSHL-- 120
Query: 81 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPENF 139
PL VL+Q+N S +ESKSGI + + V NL GLM I P D S ++F
Sbjct: 121 PPLNVLIQINISQQESKSGISLQDLPALAQQVN-DYDNLCLRGLMCIPAPQDEASLTQDF 179
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
++ ++ + + LSMGMSGD E AIE GST VR+GS IFGPR+
Sbjct: 180 CSMFQAFEKLKQQYSTVD---TLSMGMSGDLELAIEQGSTMVRVGSAIFGPRD 229
>gi|452944709|ref|YP_007500874.1| alanine racemase domain protein [Hydrogenobaculum sp. HO]
gi|452883127|gb|AGG15831.1| alanine racemase domain protein [Hydrogenobaculum sp. HO]
Length = 224
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 97/182 (53%), Gaps = 19/182 (10%)
Query: 19 KLLRFIDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVS 76
K+ F+ KY +D I+WHF+G LQ+NK K L V ++ V + + + + K +
Sbjct: 56 KVQEFLRKYEALKDLDIEWHFIGALQTNKVKYLKNKVK---LIHSVDRKALVDEISKRME 112
Query: 77 NLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTP 136
++ +L++VN E SKSG++ + + E+ L PN+ GLM I P Y
Sbjct: 113 HID-----ILIEVNVGQESSKSGVEENHLKELTEYT-LSKPNINLKGLMCI--PPYFEDT 164
Query: 137 EN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
E F L N + ++ K + ELSMGMS DFE AIE G+T VRIG+ +FG R+
Sbjct: 165 EKVRPFFAKLRNLKEDLEKTFNIK--LPELSMGMSHDFEVAIEEGATIVRIGTYLFGQRQ 222
Query: 193 YA 194
Y
Sbjct: 223 YT 224
>gi|114046770|ref|YP_737320.1| hypothetical protein Shewmr7_1264 [Shewanella sp. MR-7]
gi|113888212|gb|ABI42263.1| Protein of unknown function UPF0001 [Shewanella sp. MR-7]
Length = 238
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 14/170 (8%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVN 90
DI+WHF+G LQSNK + + D + + EKIA L ++ + L PL V +Q+N
Sbjct: 75 DIEWHFIGPLQSNKTALV---AQHFDWMHTLSREKIAQRLNEQRPAQLA--PLNVCIQIN 129
Query: 91 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTS-TPENFRTLLNCRA-- 147
S E++KSGID L + H + P+L+ GLM I P T+ T + R L +
Sbjct: 130 ISDEDTKSGIDAEQMLPLA-HSISQLPHLQLRGLMAI--PSATNDTAQQSRELSELKQLF 186
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ K A D LSMGMS D + AIE GST VRIGS IFG R+Y K+
Sbjct: 187 DTLKQHYPAVD--TLSMGMSNDLDVAIECGSTMVRIGSAIFGERDYGAKE 234
>gi|282854076|ref|ZP_06263413.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
J139]
gi|386071522|ref|YP_005986418.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes ATCC 11828]
gi|282583529|gb|EFB88909.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
J139]
gi|353455888|gb|AER06407.1| pyridoxal phosphate enzyme, YggS family protein [Propionibacterium
acnes ATCC 11828]
Length = 238
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + KIA+ LDK + GR+ L+VLVQ+N+S
Sbjct: 75 LEWSIIGGLQTNKAKYVARFATEFQALDSL---KIAHELDKRLQKEGRQ-LRVLVQMNSS 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAEVC 150
E KSGI P + + +L+ GLMT+ + D + + F ++ + ++
Sbjct: 131 AEPQKSGIAPEEAVDFARELAA-FDSLDVRGLMTVALNSSDQRAVADCFDLVVATQEKLR 189
Query: 151 KALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
+ G D ELSMGMSGD E AI GST VRIG+ IFG R+
Sbjct: 190 QEAGDTSDWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGTRD 231
>gi|421523523|ref|ZP_15970152.1| alanine racemase domain-containing protein [Pseudomonas putida
LS46]
gi|402752509|gb|EJX13014.1| alanine racemase domain-containing protein [Pseudomonas putida
LS46]
Length = 228
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK K + + D V V KIA L + G PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCKA 152
+SKSG P+ + + V PNL GLM I P D + F +L + +
Sbjct: 132 DSKSGCTPADLPALAKAVAA-LPNLRLRGLMAIPEPTEDRATQEAAFASLRKLQ----EG 186
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
LG D LSMGMS D E AI G+T VRIG+ +FG R+Y
Sbjct: 187 LGFGLDT--LSMGMSHDLEAAIAQGATWVRIGTALFGARDY 225
>gi|46107884|ref|XP_381001.1| hypothetical protein FG00825.1 [Gibberella zeae PH-1]
Length = 191
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 40 HLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL-GRKP----LKVLVQVNTSGE 94
H++S+ +G +PNL V + K A L+ +NL +P + V VQVNTSGE
Sbjct: 18 HIRSSGHCKSIGKIPNLFCVSSIDTSKKAQLLNTTRANLLSSEPDAPKIGVHVQVNTSGE 77
Query: 95 ESKSGIDP-SSCLGIVEHVRLRCPNLEFSGLMTIGM--PDYTSTPE----NFRTLLNCRA 147
ESKSG P + + + C NL GLMTIG +TPE +F +L R
Sbjct: 78 ESKSGCAPGDDTVALCREIIETCSNLRLLGLMTIGAIARSKATTPETENEDFVSLKEQRD 137
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
V K LG+ + ELSMGMS DFE A+ +GS+ VR+GSTIFG R
Sbjct: 138 LVAKELGLDPESLELSMGMSEDFEGAVRLGSSEVRVGSTIFGQR 181
>gi|395445968|ref|YP_006386221.1| alanine racemase domain-containing protein [Pseudomonas putida ND6]
gi|397692936|ref|YP_006530816.1| alanine racemase domain-containing protein [Pseudomonas putida
DOT-T1E]
gi|388559965|gb|AFK69106.1| alanine racemase domain-containing protein [Pseudomonas putida ND6]
gi|397329666|gb|AFO46025.1| alanine racemase domain-containing protein [Pseudomonas putida
DOT-T1E]
Length = 228
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 35 WHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE 94
WHF+G +QSNK K + + D V V KIA L + G PL + +QVN SGE
Sbjct: 76 WHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGE 131
Query: 95 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEVCKA 152
+SKSG P+ + + V PNL GLM I P D + F +L + +
Sbjct: 132 DSKSGCTPADLPALAKAVAA-LPNLRLRGLMAIPEPTEDRATQEAAFASLRKLQ----EG 186
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
LG D LSMGMS D E AI G+T VRIG+ +FG R+Y
Sbjct: 187 LGFGLD--TLSMGMSHDLEAAIAQGATWVRIGTALFGARDY 225
>gi|403253333|ref|ZP_10919634.1| hypothetical protein EMP_06137 [Thermotoga sp. EMP]
gi|402810867|gb|EJX25355.1| hypothetical protein EMP_06137 [Thermotoga sp. EMP]
Length = 229
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I WHF+G +Q+NKAK + VP +++ V E+ ++K LG K K+L++VN
Sbjct: 73 IIWHFIGRIQTNKAKYI---VPRCELIHSVWREEELKEIEKRAEKLG-KIQKILLEVNVF 128
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAE 148
EE+K+G+ G ++ + P++E G MT M Y PE FRTL R E
Sbjct: 129 KEETKAGLLVEEVEGFLKLCQ-EFPHVEVLGFMT--MAPYVGDPEEVRWGFRTLRELRDE 185
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 188
+ ELSMGMS DFE AIE G+T VRIGS IF
Sbjct: 186 LASRFSGNVKLKELSMGMSNDFEVAIEEGATMVRIGSAIF 225
>gi|182412322|ref|YP_001817388.1| alanine racemase domain-containing protein [Opitutus terrae PB90-1]
gi|177839536|gb|ACB73788.1| alanine racemase domain protein [Opitutus terrae PB90-1]
Length = 235
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +GHLQSNKA+ D ++ V K+ + LD+A + LG K L VL+QVN
Sbjct: 77 VRWELIGHLQSNKARI---AAQQFDRIQSVDRAKLLDPLDRAAAELG-KTLPVLLQVNAG 132
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE----NFRTLLNCRAE 148
+ +K G + ++E L P+L GLMTI +S PE F L R E
Sbjct: 133 RDPAKFGAELEDAPQLLEQA-LGRPHLRVEGLMTIA--PLSSDPEVARRTFAALRTLRDE 189
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ G+ ELSMGM+ DF AI GST+VR+G+ +FG R
Sbjct: 190 LAARFGV--PLSELSMGMTSDFRVAIAEGSTTVRVGTALFGAR 230
>gi|154483520|ref|ZP_02025968.1| hypothetical protein EUBVEN_01224 [Eubacterium ventriosum ATCC
27560]
gi|149735430|gb|EDM51316.1| pyridoxal phosphate enzyme, YggS family [Eubacterium ventriosum
ATCC 27560]
Length = 230
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ DK++ LP++I+WH +GHLQ NK K L+G V ++ V + ++A ++K +
Sbjct: 56 KVQELCDKFDILPKNIRWHMIGHLQRNKVKYLVGKV---QLIHSVDSLRLAEQIEKEFAK 112
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPE 137
+ VL++VN + EESK GI ++ + + P++ GLMTI +T PE
Sbjct: 113 -ADEIANVLIEVNMAQEESKFGITSQETEELIREI-AKLPHVRIQGLMTIA--PFTDNPE 168
Query: 138 NFRTLLNCRAEVCKALGMAE-DQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
R ++ + D LSMGM+GD++ A+E G+T VR+G+ IFG R Y
Sbjct: 169 TNRVYFKNMKKLSVDINNKNIDNVSMNVLSMGMTGDYQVAVEEGATMVRVGTGIFGERNY 228
>gi|389575748|ref|ZP_10165776.1| pyridoxal phosphate enzyme, YggS family [Eubacterium cellulosolvens
6]
gi|389311233|gb|EIM56166.1| pyridoxal phosphate enzyme, YggS family [Eubacterium cellulosolvens
6]
Length = 230
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP DI+WH +GHLQ NK K + V M+ V ++A ++K + R + VL+
Sbjct: 66 HLPSDIRWHMIGHLQRNKVKYIAEYVT---MIHAVDTLELAKTIEKEAAKHDR-VIPVLI 121
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN---FRTLLN 144
+VN +GEESK G+ P V+ V + P++ SGLMT P + EN F L
Sbjct: 122 EVNVAGEESKFGVAPEETKEFVKAVSV-LPHVHVSGLMT-SAPFVKNAEENRSVFEKLHE 179
Query: 145 CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
++ + LSMGM+ D+ A+E G+T VR+G+ IFG R+Y+K
Sbjct: 180 LSVDINRENIDNVTMRVLSMGMTNDYNVAVEEGATLVRVGTAIFGARDYSK 230
>gi|399925809|ref|ZP_10783167.1| hypothetical protein MinjM_02164 [Myroides injenensis M09-0166]
Length = 223
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 19 KLLRFIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSN 77
K+ +KY LP+DI+WH +GH+Q NK K + P + ++ GV + K+ ++K
Sbjct: 47 KIQEMTNKYEILPKDIQWHMIGHVQRNKVKYI---APYVSLIHGVDSFKLLQEINKQAKK 103
Query: 78 LGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRC-PNLEFSGLMTIGMPDYTSTP 136
R + L+Q+ + EE+K G+D S I+ + N+ GLM GM +T
Sbjct: 104 YDR-VIPCLLQLFIAKEETKFGLDQSELFEILNSDEFKALENISIKGLM--GMATFTDNE 160
Query: 137 ----ENFRTLLNCRAEVCKALGMAE--DQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGP 190
+ F +L EV + + D LSMGMS D++ AIE GST +RIGS+IFG
Sbjct: 161 STIRQEFTSLKKIYDEVNQKFNQLDNVDLTTLSMGMSNDYKIAIECGSTMIRIGSSIFGN 220
Query: 191 REY 193
R Y
Sbjct: 221 RNY 223
>gi|320094183|ref|ZP_08025992.1| FkuA protein [Actinomyces sp. oral taxon 178 str. F0338]
gi|319978880|gb|EFW10414.1| FkuA protein [Actinomyces sp. oral taxon 178 str. F0338]
Length = 245
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 91/184 (49%), Gaps = 16/184 (8%)
Query: 10 KITYKKSLIKLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIAN 69
++ ++ + +R +D + H +G LQSNK L V D VE V + ++A
Sbjct: 61 RVQEARATAEAVRRVDGARI------HLIGPLQSNKINQALACV---DAVETVSSAELAR 111
Query: 70 HLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM 129
+D + +PL V VQVN SGE +KSG P + +V+ V C NL +G MT+G+
Sbjct: 112 RIDARAT----RPLPVFVQVNVSGEATKSGCAPDAVAPVVDAVS-ECANLRLAGFMTVGL 166
Query: 130 PDYTSTP--ENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 187
P + L + R G+ ELSMGMS D AI G+T VR+G+ +
Sbjct: 167 NSTDEAPVRRAYARLRSIRDAAAARTGIGAASLELSMGMSRDMAWAIAEGATIVRLGTAV 226
Query: 188 FGPR 191
FG R
Sbjct: 227 FGAR 230
>gi|160914738|ref|ZP_02076952.1| hypothetical protein EUBDOL_00745 [Eubacterium dolichum DSM 3991]
gi|158433278|gb|EDP11567.1| pyridoxal phosphate enzyme, YggS family [Eubacterium dolichum DSM
3991]
Length = 215
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 17/181 (9%)
Query: 19 KLLRFIDKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL 78
K+ + KY+ P+ WH +GHLQ NK K V DM+E + + ++A ++K + +
Sbjct: 46 KVQELVAKYD-PK-YTWHLIGHLQRNKVK---DAVKYADMIESLDSMRLAQEIEKQCAKI 100
Query: 79 GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG-----MPDYT 133
K + VLV+VN S EE+K+GI C+ ++ + + P+L+ GLM +G D
Sbjct: 101 D-KVMPVLVEVNISQEENKTGIAYEECINFIKECQ-QFPHLDIQGLMCVGPLTDNQADIE 158
Query: 134 STPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
+ E+ TL E +A G + LSMGMS D+E AI+ GST VR+G+ +FG R+Y
Sbjct: 159 ACFESMHTLFQ---EAQEAFGPSIHI--LSMGMSDDYELAIKHGSTMVRLGTILFGKRDY 213
Query: 194 A 194
Sbjct: 214 T 214
>gi|126439936|ref|YP_001060310.1| hypothetical protein BURPS668_3299 [Burkholderia pseudomallei 668]
gi|126451773|ref|YP_001067570.1| hypothetical protein BURPS1106A_3333 [Burkholderia pseudomallei
1106a]
gi|167920374|ref|ZP_02507465.1| hypothetical protein BpseBC_17639 [Burkholderia pseudomallei
BCC215]
gi|237813700|ref|YP_002898151.1| pyridoxal phosphate enzyme, YggS family [Burkholderia pseudomallei
MSHR346]
gi|242315201|ref|ZP_04814217.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
1106b]
gi|254180739|ref|ZP_04887337.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
1655]
gi|403520006|ref|YP_006654140.1| hypothetical protein BPC006_I3384 [Burkholderia pseudomallei
BPC006]
gi|126219429|gb|ABN82935.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
668]
gi|126225415|gb|ABN88955.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
1106a]
gi|184211278|gb|EDU08321.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
1655]
gi|237506063|gb|ACQ98381.1| pyridoxal phosphate enzyme, YggS family [Burkholderia pseudomallei
MSHR346]
gi|242138440|gb|EES24842.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
1106b]
gi|403075649|gb|AFR17229.1| hypothetical protein BPC006_I3384 [Burkholderia pseudomallei
BPC006]
Length = 232
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVL 86
+L +++WHF+G LQSNK + + D V + KIA L ++ ++L PL V
Sbjct: 71 DLRAELEWHFIGPLQSNKTRPV---AERFDWVHTIDRLKIAQRLSEQRPAHL--PPLNVC 125
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT---LL 143
VQVN SGE SKSG+ P+ G+ P L GLM I P+ + PE R L
Sbjct: 126 VQVNISGEASKSGVAPADAAGLAR-AVAALPALRLRGLMAI--PEPETDPEAKRAPHRAL 182
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ E +A G+A D LSMGMS D E A+ G+T VRIG+ IFG R+YA
Sbjct: 183 HALFEQLRAGGLALDT--LSMGMSDDLEAAVAEGATIVRIGTAIFGARDYA 231
>gi|345871352|ref|ZP_08823298.1| protein of unknown function UPF0001 [Thiorhodococcus drewsii AZ1]
gi|343920515|gb|EGV31246.1| protein of unknown function UPF0001 [Thiorhodococcus drewsii AZ1]
Length = 231
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI+WHF+G +QSNK + + + D V G+ + A L+ PL V +Q+N
Sbjct: 75 DIEWHFIGRIQSNKTRQIAS---HFDWVHGLSDPDHARRLNDQRPPEA-PPLDVCLQINL 130
Query: 92 SGEESKSGI---DPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCR 146
SGE+SKSGI S L + + + P L GLMT+ P D + FR L R
Sbjct: 131 SGEDSKSGIAAEQASELLAVCDSL----PRLRVRGLMTLPAPSDDEDAQRIPFRALRALR 186
Query: 147 AEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
AL A+ + E LSMGMS D E A+ G+T VRIG+ +FGPR Y
Sbjct: 187 ----DALTTADRRLECLSMGMSDDLEAAVLEGATHVRIGTAVFGPRPY 230
>gi|317503300|ref|ZP_07961351.1| proline synthetase associated protein [Prevotella salivae DSM
15606]
gi|315665579|gb|EFV05195.1| proline synthetase associated protein [Prevotella salivae DSM
15606]
Length = 224
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
LP+DI+WHF+GHLQ+NK K + P + M+E V + K+ ++K + R +KVL+
Sbjct: 59 QLPKDIQWHFIGHLQTNKVKYI---APYISMIEAVDSLKLLKEINKQAAKHDR-VIKVLL 114
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLR-CPNLEFSGLMTIG---------MPDYTSTPE 137
+++ + EE+K G+ C ++E R +++ GLM + ++ + +
Sbjct: 115 ELHIAEEETKYGLTIEDCRALLEEGTWRELEHVKICGLMMMASNTDNQKQIAAEFDTAKQ 174
Query: 138 NFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
F + N + +D E S GMS D++ A+E GST VR+G+TIFGPR Y
Sbjct: 175 FFDEIKN------QYFSKEKDFKECSWGMSHDYKIAVEHGSTMVRVGTTIFGPRVY 224
>gi|53720454|ref|YP_109440.1| hypothetical protein BPSL2846 [Burkholderia pseudomallei K96243]
gi|167817288|ref|ZP_02448968.1| hypothetical protein Bpse9_19264 [Burkholderia pseudomallei 91]
gi|167912418|ref|ZP_02499509.1| hypothetical protein Bpse112_18169 [Burkholderia pseudomallei 112]
gi|217420924|ref|ZP_03452429.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
576]
gi|226194204|ref|ZP_03789803.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
Pakistan 9]
gi|254191574|ref|ZP_04898077.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
Pasteur 52237]
gi|254194883|ref|ZP_04901313.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
S13]
gi|254257980|ref|ZP_04949034.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
1710a]
gi|254299169|ref|ZP_04966619.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
406e]
gi|386860579|ref|YP_006273528.1| hypothetical protein BP1026B_I0465 [Burkholderia pseudomallei
1026b]
gi|418377949|ref|ZP_12965966.1| hypothetical protein BP354A_0424 [Burkholderia pseudomallei 354a]
gi|418539042|ref|ZP_13104643.1| hypothetical protein BP1026A_5815 [Burkholderia pseudomallei 1026a]
gi|418539822|ref|ZP_13105397.1| hypothetical protein BP1258A_0303 [Burkholderia pseudomallei 1258a]
gi|418546072|ref|ZP_13111304.1| hypothetical protein BP1258B_0396 [Burkholderia pseudomallei 1258b]
gi|418552520|ref|ZP_13117379.1| hypothetical protein BP354E_0403 [Burkholderia pseudomallei 354e]
gi|52210868|emb|CAH36856.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|157809158|gb|EDO86328.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
406e]
gi|157939245|gb|EDO94915.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
Pasteur 52237]
gi|169651632|gb|EDS84325.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
S13]
gi|217396336|gb|EEC36353.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
576]
gi|225933669|gb|EEH29657.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
Pakistan 9]
gi|254216669|gb|EET06053.1| conserved hypothetical protein TIGR00044 [Burkholderia pseudomallei
1710a]
gi|385346723|gb|EIF53398.1| hypothetical protein BP1026A_5815 [Burkholderia pseudomallei 1026a]
gi|385363571|gb|EIF69338.1| hypothetical protein BP1258A_0303 [Burkholderia pseudomallei 1258a]
gi|385365465|gb|EIF71139.1| hypothetical protein BP1258B_0396 [Burkholderia pseudomallei 1258b]
gi|385372929|gb|EIF78011.1| hypothetical protein BP354E_0403 [Burkholderia pseudomallei 354e]
gi|385377845|gb|EIF82383.1| hypothetical protein BP354A_0424 [Burkholderia pseudomallei 354a]
gi|385657707|gb|AFI65130.1| hypothetical protein BP1026B_I0465 [Burkholderia pseudomallei
1026b]
Length = 232
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVL 86
+L +++WHF+G LQSNK + + D V + KIA L ++ ++L PL V
Sbjct: 71 DLRAELEWHFIGPLQSNKTRPV---AERFDWVHTIDRLKIAQRLSEQRPAHL--PPLNVC 125
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT---LL 143
VQVN SGE SKSG+ P+ G+ P L GLM I P+ + PE R L
Sbjct: 126 VQVNISGEASKSGVAPADAAGLAR-AVAALPALRLRGLMAI--PEPETDPEAKRAPHRAL 182
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ E +A G+A D LSMGMS D E A+ G+T VRIG+ IFG R+YA
Sbjct: 183 HALFEQLRAGGLALDT--LSMGMSDDLEAAVAEGATIVRIGTAIFGARDYA 231
>gi|299533817|ref|ZP_07047188.1| hypothetical protein CTS44_23491 [Comamonas testosteroni S44]
gi|298718233|gb|EFI59219.1| hypothetical protein CTS44_23491 [Comamonas testosteroni S44]
Length = 274
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
D++W +GHLQ+NKA+ + ++ + ++A LD+ + GR L V VQVNT
Sbjct: 96 DLRWSVIGHLQTNKARLVARFASEFQALDSL---RVAEALDRHLQGQGRS-LDVFVQVNT 151
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT----LLNCRA 147
SGE SK G++P G ++ + + L GLMT+ + +++ E R L R
Sbjct: 152 SGEASKYGLNPEDVPGFIQQLPV-FSALRVRGLMTLAL--FSAEAERVRRCFILLRELRD 208
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
++ ++ + LSMGMSGDFE AIE G+T VR+G IFG R
Sbjct: 209 QLQQSAPAGMELDALSMGMSGDFEIAIEEGATVVRVGQAIFGAR 252
>gi|294053951|ref|YP_003547609.1| alanine racemase domain-containing protein [Coraliomargarita
akajimensis DSM 45221]
gi|293613284|gb|ADE53439.1| alanine racemase domain protein [Coraliomargarita akajimensis DSM
45221]
Length = 231
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 26 KYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKV 85
K + ++W +GHLQSNKAK V D ++ V + K+ LD+ + G++ + +
Sbjct: 69 KAKMTTTVRWELIGHLQSNKAKD---AVEQFDRIQSVDSLKLLQRLDRMAAACGKR-MSI 124
Query: 86 LVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG----MPDYT-STPENFR 140
L+Q N + +K G P+ VE V L C NL+ GLMTI PD + E R
Sbjct: 125 LLQCNAGEDPNKYGFSPAGLEQAVE-VALNCSNLQLDGLMTIAPLTDNPDVAKACFERLR 183
Query: 141 TLLN-CRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 193
TL + C AL ELSMGM+GD + AI GST +R+G+ ++G R Y
Sbjct: 184 TLRDHCADTFSVALP------ELSMGMTGDLDSAIAAGSTQIRVGTALYGSRGY 231
>gi|86158925|ref|YP_465710.1| hypothetical protein Adeh_2503 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775436|gb|ABC82273.1| protein of unknown function UPF0001 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 227
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 89/164 (54%), Gaps = 15/164 (9%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP ++WHF+G LQ+NKAK L G + +V V E++A L + G +VL+
Sbjct: 64 DLP-GLRWHFIGGLQTNKAKYLAG---RVALVHAVDREELAAELSRRFGQKGAT-ARVLL 118
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRA 147
+VN GE SK G P + VR P++E +GLM I P P +FR L R
Sbjct: 119 EVNVGGEASKEGCPPDRVEALAAAVRA-LPSVELAGLMCIPPPADDPRP-HFRALRALRD 176
Query: 148 EVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
LG+ E LSMGMS D+ A+E G+T VR+GS IFG R
Sbjct: 177 R----LGLRE----LSMGMSADWRIAVEEGATLVRVGSAIFGAR 212
>gi|253998334|ref|YP_003050397.1| alanine racemase domain-containing protein [Methylovorus
glucosetrophus SIP3-4]
gi|253985013|gb|ACT49870.1| alanine racemase domain protein [Methylovorus glucosetrophus
SIP3-4]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 12/172 (6%)
Query: 24 IDKYNLPED--IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
++K L +D I+WHF+G +QSNK + + + V GV KIA L+ A
Sbjct: 63 LNKQALLQDLPIEWHFIGPIQSNKTQPI---AQHFSWVHGVDRLKIAERLN-AARPAELP 118
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENF 139
PL++ +QVN S EESKSGI P + + + P L+ GLM I P D F
Sbjct: 119 PLQICLQVNVSHEESKSGIAPEEAYALASAI-TQLPRLQLRGLMAIPAPTPDMELQRAQF 177
Query: 140 RTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
R ++ + + G+A D LS+GMS DF AI G+T VR+GS IFGPR
Sbjct: 178 R-MVRALYDALRQQGIALD--TLSIGMSEDFPVAIGEGATIVRVGSAIFGPR 226
>gi|89902638|ref|YP_525109.1| hypothetical protein Rfer_3879 [Rhodoferax ferrireducens T118]
gi|89347375|gb|ABD71578.1| Protein of unknown function UPF0001 [Rhodoferax ferrireducens T118]
Length = 239
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 12/166 (7%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLV 87
+LP ++WH +G +QSNK + + + D V+ + KIA L GR PL+V +
Sbjct: 75 HLP--LEWHCIGPIQSNKTRLV---AEHFDWVQTLDRLKIAQRLSDQ-RPAGRPPLQVCI 128
Query: 88 QVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNC 145
QVN G SKSG+ PS L + + V PNL G+M+I PD+ + F +
Sbjct: 129 QVNVDGGASKSGVSPSEALALAQRV-AELPNLRLRGIMSIPEPTPDFVAACALF-ARVKA 186
Query: 146 RAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ A G+A D LSMGMS D E AI+ GST VR+G+ IFG R
Sbjct: 187 VFDALNAEGLALD--TLSMGMSADMEAAIQSGSTMVRVGTAIFGGR 230
>gi|418297911|ref|ZP_12909751.1| hypothetical protein ATCR1_10338 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355537281|gb|EHH06541.1| hypothetical protein ATCR1_10338 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 219
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+ H +G LQSNKA V D+VE V EKIA L + GR L+ VQVNT
Sbjct: 75 IELHLIGPLQSNKAAD---AVALFDVVESVDREKIARALAEECGKQGRS-LRFYVQVNTG 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKA 152
E K+GIDP + V R L+ GLM I D P +F L A++ +
Sbjct: 131 LELQKAGIDPRETVAFVAFCRDEL-KLQIEGLMCIPPADENPGP-HFALL----AKLARE 184
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G+ + LSMGMSGDFE A+E G+TSVR+GS IFG R
Sbjct: 185 CGLEK----LSMGMSGDFETAVEFGATSVRVGSAIFGTR 219
>gi|408786428|ref|ZP_11198165.1| hypothetical protein C241_09406 [Rhizobium lupini HPC(L)]
gi|408487800|gb|EKJ96117.1| hypothetical protein C241_09406 [Rhizobium lupini HPC(L)]
Length = 219
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
I+ H +G LQSNKA V D+VE V EKIA L + GR L+ VQVNT
Sbjct: 75 IELHLIGPLQSNKAAD---AVALFDVVESVDREKIARALAEECGKQGRS-LRFYVQVNTG 130
Query: 93 GEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKA 152
E K+GIDP + V R L GLM I P P LL A++ K
Sbjct: 131 LEPQKAGIDPRETVAFVAFCRDEL-KLAVEGLMCI--PPANENPGPHFALL---AKLAKQ 184
Query: 153 LGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
G+ + LSMGMSGDFE A+E G+TSVR+GS IFG R
Sbjct: 185 CGLEK----LSMGMSGDFETAVEFGATSVRVGSAIFGTR 219
>gi|345864320|ref|ZP_08816522.1| UPF0001 protein YggS [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345877264|ref|ZP_08829017.1| pyridoxal phosphate enzyme [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225731|gb|EGV52081.1| pyridoxal phosphate enzyme [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345124516|gb|EGW54394.1| UPF0001 protein YggS [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 229
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 14/174 (8%)
Query: 24 IDKYNLPEDI--KWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
+DK+ +D+ +WHF+G +Q NK K + D V +G+ K A L++ G
Sbjct: 63 LDKHRQLQDLPLEWHFIGRIQGNKTKPI---AEWFDWVHSLGSLKHARRLNQQRPP-GLA 118
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENF 139
PLK +Q+NTSGE SK G P L ++ + P ++ +GLMT+ P + + F
Sbjct: 119 PLKACIQINTSGEASKGGHSPDELLELLP-AYMELPRIQIAGLMTLPAPADSLEAQRKPF 177
Query: 140 RTLLNCRAEV-CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
R L R + C L + LS+GMS D E AI GST VRIG+ IFGPR+
Sbjct: 178 RQLRELRDRLRCNDLPLET----LSIGMSADLEAAIAEGSTIVRIGTAIFGPRQ 227
>gi|23098934|ref|NP_692400.1| hypothetical protein OB1479 [Oceanobacillus iheyensis HTE831]
gi|22777162|dbj|BAC13435.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 223
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 95/173 (54%), Gaps = 17/173 (9%)
Query: 23 FIDKYN-LPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRK 81
F++KYN + + WHF+G LQS K K ++ V D + + + +A ++K ++
Sbjct: 62 FLEKYNEIQNQVNWHFIGSLQSRKVKDIINQV---DFIHSLDRKSLAKEINKRATH---- 114
Query: 82 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--- 138
P+ VQVN SGEESK GI P + ++ + N++ GLMT M + PE+
Sbjct: 115 PVNCFVQVNVSGEESKHGIFPDEVISFIKSLS-GYENIKIVGLMT--MAPHVEDPEDVRS 171
Query: 139 -FRTLLNCRAEVCKALGMAEDQCE-LSMGMSGDFEQAIEMGSTSVRIGSTIFG 189
F+ L + R E+ K + CE LSMGMS D+ AIE G+T VRIGS + G
Sbjct: 172 VFKKLRDLRDEITKK-ELPHAPCEWLSMGMSNDYHIAIEEGATHVRIGSKLVG 223
>gi|254253188|ref|ZP_04946506.1| hypothetical protein BDAG_02441 [Burkholderia dolosa AUO158]
gi|124895797|gb|EAY69677.1| hypothetical protein BDAG_02441 [Burkholderia dolosa AUO158]
Length = 262
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 93/171 (54%), Gaps = 14/171 (8%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVL 86
+L D++WHF+G LQSNK + + D V V KIA L D+ ++L PL V
Sbjct: 101 DLRADLEWHFIGPLQSNKTRAV---AERFDWVHSVDRLKIAQRLADQRPAHL--PPLNVC 155
Query: 87 VQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRT---LL 143
VQVN SGE SKSG+ P+ + V P+L GLM I P+ + P+ R L
Sbjct: 156 VQVNISGEASKSGVAPADVADVAHAVAA-LPSLRLRGLMAI--PEPAADPDAQRAPHRAL 212
Query: 144 NCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 194
+ +A G+ D LSMGMS D E A+ G+T VR+G+ IFG R+Y+
Sbjct: 213 RALFDTLRADGLPLDT--LSMGMSADLEAAVLEGATIVRVGTAIFGARDYS 261
>gi|422440027|ref|ZP_16516841.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL037PA3]
gi|422471152|ref|ZP_16547652.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL037PA2]
gi|422573882|ref|ZP_16649442.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL044PA1]
gi|313837213|gb|EFS74927.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL037PA2]
gi|314927769|gb|EFS91600.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL044PA1]
gi|314971984|gb|EFT16082.1| pyridoxal phosphate enzyme, YggS family [Propionibacterium acnes
HL037PA3]
Length = 198
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
++W +G LQ+NKAK + ++ + K+A+ LDK + G + L+VLVQVN+S
Sbjct: 35 LEWAIIGGLQTNKAKYVARFAAEFQALDSL---KVAHELDKRLQQEGHQ-LRVLVQVNSS 90
Query: 93 GEESKSGIDPSSCLGIVEHVR--LRCPNLEFSGLMTIGM--PDYTSTPENFRTLLNCRAE 148
E KSGI P VE R +L+ GLMT+ + PD + + F + + +
Sbjct: 91 AEPQKSGIAPDEA---VEFARELAAFDSLDVRGLMTVALNSPDQQAVADCFDLVAATQEK 147
Query: 149 VCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+ + G ELSMGMSGD E AI GST VRIG+ IFG R+ A+
Sbjct: 148 LRQEAGDISSWSELSMGMSGDLEIAIAHGSTQVRIGTDIFGARDPAQ 194
>gi|399018331|ref|ZP_10720512.1| pyridoxal phosphate enzyme, YggS family [Herbaspirillum sp. CF444]
gi|398101731|gb|EJL91938.1| pyridoxal phosphate enzyme, YggS family [Herbaspirillum sp. CF444]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 26 KYNLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLK 84
K PE + WHF+G +QSNK + + + D V V EKIA L + G PL
Sbjct: 70 KLAAPEAQVAWHFIGPIQSNKTRQI---AEHFDWVHSVDREKIARRLSEQRPP-GLPPLN 125
Query: 85 VLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRTL 142
+ +QVN S E+SKSG+ P L + + V P L GLM I P + FR L
Sbjct: 126 ICLQVNISAEDSKSGLSPEELLPVAQAVAA-MPGLRLRGLMAIPAPTEVEQEQRAAFRRL 184
Query: 143 LNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPRE 192
A + A G+A D LSMGMS D + AI G+T VR+G+ IFG R+
Sbjct: 185 REL-AALLVADGIACD--TLSMGMSADMDAAIAEGATIVRVGTAIFGQRQ 231
>gi|345874154|ref|ZP_08825970.1| pyridoxal phosphate enzyme, YggS family [Neisseria weaveri LMG
5135]
gi|343970799|gb|EGV38970.1| pyridoxal phosphate enzyme, YggS family [Neisseria weaveri LMG
5135]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 32 DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT 91
DI WH +G +QSNK K + V V KIA L PL++ ++VN
Sbjct: 74 DIVWHIIGDIQSNKTKYV---AERAHWVHTVSRLKIAERLSHQRPT-HMPPLQICIEVNI 129
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN--FRTLLNCRAEV 149
+ E +K GI P L + + ++ P L GLM + D + T N F+T+ N AE+
Sbjct: 130 AQEPNKHGIAPEDVLPLAREL-IKLPKLALRGLMCVAKADCSETELNRQFQTMRNLLAEL 188
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAK 195
+A G+A D LSMGMS D E AI G+T VRIGS IFG R+YA+
Sbjct: 189 NQA-GIAADV--LSMGMSSDMETAIRNGATHVRIGSAIFGNRQYAQ 231
>gi|431925491|ref|YP_007238525.1| pyridoxal phosphate protein [Pseudomonas stutzeri RCH2]
gi|431823778|gb|AGA84895.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas stutzeri RCH2]
Length = 229
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNT 91
+ WHF+G +QSNK K++ D V V KIA L D+ + L PL + +QVN
Sbjct: 74 LAWHFIGPIQSNKTKSI---AERFDWVHSVDRLKIAQRLSDQRPAEL--PPLNICLQVNV 128
Query: 92 SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRTLLNCRAEV 149
SGE SKSG P L + + V P L GLM I P D F L R E+
Sbjct: 129 SGEASKSGCAPEELLQLAQAVAA-MPQLRLRGLMCIPAPSEDPAEQRAAFARLRALRDEL 187
Query: 150 CKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
L LSMGMS D E AI G+T VRIG+ +FG R+Y + Q
Sbjct: 188 PLTLDT------LSMGMSQDLEAAIAEGATWVRIGTALFGARDYGRPQ 229
>gi|441516312|ref|ZP_20998062.1| hypothetical protein GOHSU_02_01690 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441456898|dbj|GAC56023.1| hypothetical protein GOHSU_02_01690 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 254
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 88/170 (51%), Gaps = 25/170 (14%)
Query: 33 IKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 92
+ W +GHLQ+NKAK + D + + + ++A LD+ + GR+ L VLVQVNTS
Sbjct: 89 VAWSLIGHLQTNKAKDVAAFA---DEFQALDSLRVARALDRRLQAAGRQ-LDVLVQVNTS 144
Query: 93 GEESKSGIDPSSC------LGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCR 146
EE K G+ P L E +R+R GLMT+ + +T E R R
Sbjct: 145 AEEQKYGLAPDEVDTFLRDLAEFETLRVR-------GLMTLAL--FTDDTERIRACFR-R 194
Query: 147 AEVCKALGMAEDQC-----ELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
+ AED ELSMGMSGD+E A+E GST VR+G IFG R
Sbjct: 195 LRAVRDRVRAEDPALLGPGELSMGMSGDYELAVEEGSTCVRVGQAIFGAR 244
>gi|45187572|ref|NP_983795.1| ADL301Cp [Ashbya gossypii ATCC 10895]
gi|44982310|gb|AAS51619.1| ADL301Cp [Ashbya gossypii ATCC 10895]
Length = 268
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 95/179 (53%), Gaps = 26/179 (14%)
Query: 28 NLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVL- 86
LP DI+WHF+G LQSNK K L V NL VE + + K A L++A + +L
Sbjct: 97 ELPGDIQWHFIGALQSNKCKDL-AKVVNLHAVETIDSLKKARKLEEARAKFQPDAPAILC 155
Query: 87 -VQVNTSGEESKSGI-DPSSCLGIVE--------HVRLRCPNLEFSGLMTIGMPD--YTS 134
++VNTSGE K+G+ D + +VE HVRLR GLMTIG D + +
Sbjct: 156 SIEVNTSGEAQKAGVSDEAELCELVEFFLSEDAKHVRLR-------GLMTIGSWDASHAA 208
Query: 135 TPEN--FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 191
EN F L + + G+ ELSMGMS DF A+ GS+ VRIG+ IFG R
Sbjct: 209 DGENPEFAALAKWKRVLDGKYGL---NLELSMGMSADFAAAMRQGSSEVRIGTDIFGAR 264
>gi|388468560|ref|ZP_10142770.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas synxantha
BG33R]
gi|388012140|gb|EIK73327.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas synxantha
BG33R]
Length = 231
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 93/176 (52%), Gaps = 17/176 (9%)
Query: 25 DKYNLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPL 83
D +LP + WHF+G +QSNK + + N V V KIA L ++ ++L PL
Sbjct: 68 DLTDLP--LSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQRPADL--PPL 120
Query: 84 KVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP--DYTSTPENFRT 141
+ +QVN SGE SKSG P+ + + P L+ GLM I P D + F +
Sbjct: 121 NICIQVNVSGEASKSGCTPADLPALANAISA-LPRLKLRGLMAIPEPTEDRAAQDAAFAS 179
Query: 142 LLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 197
+ + +A + AL LSMGMS D E AI G+T VRIG+ +FG R+Y++ Q
Sbjct: 180 VRDLQASLNLALDT------LSMGMSHDLESAIAQGATWVRIGTALFGARDYSQPQ 229
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,989,246,657
Number of Sequences: 23463169
Number of extensions: 119846706
Number of successful extensions: 284868
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3927
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 273094
Number of HSP's gapped (non-prelim): 4163
length of query: 199
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 64
effective length of database: 9,191,667,552
effective search space: 588266723328
effective search space used: 588266723328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)