Query 029065
Match_columns 199
No_of_seqs 119 out of 1124
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 11:02:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bzb_A Uncharacterized protein 99.8 1.3E-18 4.3E-23 142.0 11.1 154 38-193 75-245 (281)
2 3evz_A Methyltransferase; NYSG 99.7 3.3E-16 1.1E-20 123.1 13.9 127 42-184 55-204 (230)
3 4hc4_A Protein arginine N-meth 99.7 1.1E-16 3.9E-21 135.3 8.6 106 36-156 77-186 (376)
4 3lpm_A Putative methyltransfer 99.7 5.8E-16 2E-20 124.4 12.2 151 18-183 17-198 (259)
5 3mti_A RRNA methylase; SAM-dep 99.7 8.4E-16 2.9E-20 116.9 12.1 107 41-161 21-137 (185)
6 1pjz_A Thiopurine S-methyltran 99.7 2.6E-16 8.8E-21 122.3 9.2 145 42-189 22-179 (203)
7 3p9n_A Possible methyltransfer 99.7 6.8E-16 2.3E-20 118.1 11.4 110 41-163 43-157 (189)
8 4gek_A TRNA (CMO5U34)-methyltr 99.7 4.8E-16 1.6E-20 125.6 10.6 107 41-163 69-182 (261)
9 2xvm_A Tellurite resistance pr 99.7 2.1E-15 7.3E-20 115.4 13.5 104 41-160 31-137 (199)
10 1vl5_A Unknown conserved prote 99.7 1.4E-15 4.8E-20 121.7 12.9 106 42-162 37-143 (260)
11 1nkv_A Hypothetical protein YJ 99.6 1E-15 3.6E-20 121.9 11.7 106 41-161 35-142 (256)
12 1xxl_A YCGJ protein; structura 99.6 3.2E-15 1.1E-19 118.5 14.3 107 41-162 20-127 (239)
13 3g5l_A Putative S-adenosylmeth 99.6 2.4E-15 8.1E-20 119.8 13.5 102 41-160 43-146 (253)
14 4htf_A S-adenosylmethionine-de 99.6 1.4E-15 5E-20 123.3 11.9 108 42-162 68-176 (285)
15 3dlc_A Putative S-adenosyl-L-m 99.6 2.8E-15 9.6E-20 116.1 12.9 105 44-162 45-151 (219)
16 3dh0_A SAM dependent methyltra 99.6 4.3E-15 1.5E-19 115.7 13.5 127 42-183 37-178 (219)
17 3vc1_A Geranyl diphosphate 2-C 99.6 5.2E-15 1.8E-19 121.8 14.6 107 41-162 116-224 (312)
18 3h2b_A SAM-dependent methyltra 99.6 4.4E-15 1.5E-19 114.4 12.9 124 43-186 42-182 (203)
19 3f4k_A Putative methyltransfer 99.6 3.5E-15 1.2E-19 118.9 12.6 107 40-161 44-152 (257)
20 2o57_A Putative sarcosine dime 99.6 4E-15 1.4E-19 121.3 13.2 109 40-162 80-190 (297)
21 1xdz_A Methyltransferase GIDB; 99.6 2.3E-15 8E-20 119.5 11.0 127 42-184 70-200 (240)
22 1dus_A MJ0882; hypothetical pr 99.6 7.4E-15 2.5E-19 111.5 13.4 109 42-164 52-162 (194)
23 3e05_A Precorrin-6Y C5,15-meth 99.6 1.8E-14 6.3E-19 111.3 15.8 120 41-180 39-162 (204)
24 3lcc_A Putative methyl chlorid 99.6 3.4E-15 1.2E-19 117.7 11.8 131 41-186 65-207 (235)
25 3g89_A Ribosomal RNA small sub 99.6 2.1E-15 7.2E-20 120.9 10.4 128 42-185 80-211 (249)
26 3ofk_A Nodulation protein S; N 99.6 1.2E-15 4.1E-20 118.7 8.7 102 42-161 51-156 (216)
27 3hem_A Cyclopropane-fatty-acyl 99.6 6.4E-15 2.2E-19 120.6 13.5 106 41-163 71-187 (302)
28 3kkz_A Uncharacterized protein 99.6 3.4E-15 1.2E-19 120.0 11.7 107 40-161 44-152 (267)
29 3bus_A REBM, methyltransferase 99.6 5.7E-15 1.9E-19 118.8 12.3 108 41-162 60-169 (273)
30 2gb4_A Thiopurine S-methyltran 99.6 6.2E-15 2.1E-19 118.4 12.3 140 42-185 68-226 (252)
31 3e23_A Uncharacterized protein 99.6 6.3E-15 2.1E-19 114.3 11.9 122 42-185 43-181 (211)
32 3njr_A Precorrin-6Y methylase; 99.6 3.4E-14 1.2E-18 110.4 16.0 125 41-186 54-180 (204)
33 3jwg_A HEN1, methyltransferase 99.6 3.4E-14 1.2E-18 110.7 16.1 108 42-159 29-141 (219)
34 2p7i_A Hypothetical protein; p 99.6 4.3E-15 1.5E-19 117.1 10.9 102 41-162 41-144 (250)
35 3iv6_A Putative Zn-dependent a 99.6 6.8E-15 2.3E-19 118.8 12.2 105 41-164 44-153 (261)
36 3m70_A Tellurite resistance pr 99.6 5.6E-15 1.9E-19 119.9 11.8 102 42-160 120-224 (286)
37 3jwh_A HEN1; methyltransferase 99.6 2.5E-14 8.5E-19 111.5 15.0 109 42-160 29-142 (217)
38 2ozv_A Hypothetical protein AT 99.6 3.7E-15 1.3E-19 120.1 10.5 125 42-180 36-188 (260)
39 3dmg_A Probable ribosomal RNA 99.6 9.4E-15 3.2E-19 124.0 13.3 106 41-162 232-343 (381)
40 3sm3_A SAM-dependent methyltra 99.6 8.1E-15 2.8E-19 114.8 11.8 110 42-161 30-143 (235)
41 2fpo_A Methylase YHHF; structu 99.6 4.6E-15 1.6E-19 115.1 10.2 106 42-162 54-163 (202)
42 2ift_A Putative methylase HI07 99.6 3.1E-15 1.1E-19 115.9 9.1 110 42-163 53-167 (201)
43 2kw5_A SLR1183 protein; struct 99.6 1.5E-14 5E-19 111.4 12.8 129 42-188 30-173 (202)
44 1kpg_A CFA synthase;, cyclopro 99.6 1.3E-14 4.4E-19 117.7 13.1 105 41-162 63-171 (287)
45 1ws6_A Methyltransferase; stru 99.6 2.2E-15 7.4E-20 112.7 7.7 108 42-164 41-152 (171)
46 3l8d_A Methyltransferase; stru 99.6 4.5E-15 1.5E-19 117.1 9.8 102 42-161 53-155 (242)
47 3hnr_A Probable methyltransfer 99.6 1.3E-14 4.5E-19 113.0 12.3 101 42-162 45-148 (220)
48 1ve3_A Hypothetical protein PH 99.6 7.2E-15 2.5E-19 114.8 10.7 103 43-161 39-144 (227)
49 3cgg_A SAM-dependent methyltra 99.6 2.4E-14 8.3E-19 108.7 13.4 125 42-186 46-175 (195)
50 3mgg_A Methyltransferase; NYSG 99.6 1.4E-14 4.9E-19 116.7 12.7 106 40-160 35-143 (276)
51 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.1E-13 3.8E-18 107.8 17.3 129 42-185 41-181 (214)
52 3e8s_A Putative SAM dependent 99.6 8E-15 2.7E-19 114.1 10.5 100 42-160 52-153 (227)
53 3i9f_A Putative type 11 methyl 99.6 7.3E-15 2.5E-19 110.1 9.7 121 42-186 17-148 (170)
54 3ujc_A Phosphoethanolamine N-m 99.6 4.3E-15 1.5E-19 118.6 8.8 106 41-163 54-163 (266)
55 2fk8_A Methoxy mycolic acid sy 99.6 2.1E-14 7.3E-19 118.2 13.2 106 41-163 89-198 (318)
56 3g07_A 7SK snRNA methylphospha 99.6 3.1E-15 1.1E-19 122.3 7.9 125 36-160 40-221 (292)
57 3grz_A L11 mtase, ribosomal pr 99.6 1.3E-14 4.6E-19 112.0 11.0 121 42-184 60-183 (205)
58 3thr_A Glycine N-methyltransfe 99.6 4.9E-15 1.7E-19 120.4 8.9 112 42-161 57-177 (293)
59 3hm2_A Precorrin-6Y C5,15-meth 99.6 3.6E-14 1.2E-18 106.7 13.0 124 42-185 25-152 (178)
60 2frn_A Hypothetical protein PH 99.6 1.7E-14 5.7E-19 117.4 11.6 123 42-183 125-254 (278)
61 3bkw_A MLL3908 protein, S-aden 99.6 9.2E-15 3.2E-19 115.3 9.9 102 41-160 42-145 (243)
62 2fhp_A Methylase, putative; al 99.6 4.4E-15 1.5E-19 112.6 7.6 111 41-163 43-158 (187)
63 4fsd_A Arsenic methyltransfera 99.6 2E-14 6.9E-19 121.8 12.3 119 40-162 81-206 (383)
64 3ou2_A SAM-dependent methyltra 99.6 1.7E-14 5.7E-19 111.9 10.9 102 41-162 45-149 (218)
65 2igt_A SAM dependent methyltra 99.6 2.2E-14 7.6E-19 119.6 12.2 112 42-163 153-276 (332)
66 2yqz_A Hypothetical protein TT 99.6 1.3E-14 4.5E-19 115.7 10.5 105 41-161 38-143 (263)
67 2ex4_A Adrenal gland protein A 99.6 3.7E-14 1.3E-18 112.3 12.8 129 42-185 79-224 (241)
68 2nxc_A L11 mtase, ribosomal pr 99.6 2.3E-14 7.7E-19 115.1 11.6 122 41-184 119-242 (254)
69 3dtn_A Putative methyltransfer 99.6 1.6E-14 5.4E-19 113.6 10.4 106 40-163 42-152 (234)
70 3r0q_C Probable protein argini 99.6 1.3E-14 4.4E-19 122.9 10.5 109 37-160 58-170 (376)
71 3g5t_A Trans-aconitate 3-methy 99.6 2.9E-14 9.9E-19 116.5 12.2 104 42-157 36-147 (299)
72 2p35_A Trans-aconitate 2-methy 99.6 3.8E-14 1.3E-18 112.9 12.4 101 41-162 32-135 (259)
73 2a14_A Indolethylamine N-methy 99.6 5.2E-15 1.8E-19 119.1 7.4 147 39-185 52-237 (263)
74 3q7e_A Protein arginine N-meth 99.6 2.2E-14 7.7E-19 120.2 11.4 107 38-158 62-172 (349)
75 3gu3_A Methyltransferase; alph 99.6 2.4E-14 8.1E-19 116.4 11.1 104 41-161 21-128 (284)
76 3v97_A Ribosomal RNA large sub 99.5 2E-14 6.9E-19 130.5 11.5 140 41-194 538-690 (703)
77 2b3t_A Protein methyltransfera 99.5 2.4E-14 8.2E-19 116.0 10.8 120 42-179 109-256 (276)
78 2p8j_A S-adenosylmethionine-de 99.5 2.1E-14 7.2E-19 110.9 9.9 105 42-162 23-131 (209)
79 3ggd_A SAM-dependent methyltra 99.5 1.5E-14 5.1E-19 114.6 9.2 110 39-163 53-167 (245)
80 4dzr_A Protein-(glutamine-N5) 99.5 6.3E-16 2.1E-20 119.5 1.1 127 41-180 29-186 (215)
81 2yxd_A Probable cobalt-precorr 99.5 1E-13 3.6E-18 104.3 13.3 119 41-183 34-154 (183)
82 2esr_A Methyltransferase; stru 99.5 8.5E-15 2.9E-19 110.6 7.2 109 41-163 30-142 (177)
83 2b78_A Hypothetical protein SM 99.5 1.7E-14 5.7E-19 122.6 9.8 142 41-193 211-367 (385)
84 3eey_A Putative rRNA methylase 99.5 3.8E-14 1.3E-18 108.7 10.9 107 42-161 22-141 (197)
85 1xtp_A LMAJ004091AAA; SGPP, st 99.5 3.7E-14 1.3E-18 112.6 11.2 127 42-185 93-237 (254)
86 4dcm_A Ribosomal RNA large sub 99.5 7.7E-14 2.6E-18 118.1 13.5 108 42-162 222-337 (375)
87 2fyt_A Protein arginine N-meth 99.5 3.6E-14 1.2E-18 118.6 11.1 104 39-156 61-168 (340)
88 3g2m_A PCZA361.24; SAM-depende 99.5 6.8E-14 2.3E-18 114.3 12.2 108 42-162 82-193 (299)
89 3ccf_A Cyclopropane-fatty-acyl 99.5 1E-13 3.5E-18 112.1 13.1 100 42-162 57-157 (279)
90 3dxy_A TRNA (guanine-N(7)-)-me 99.5 3.7E-14 1.3E-18 111.5 10.2 109 42-162 34-153 (218)
91 4hg2_A Methyltransferase type 99.5 1.2E-14 4.3E-19 117.0 7.4 99 42-162 39-138 (257)
92 1y8c_A S-adenosylmethionine-de 99.5 2.4E-14 8.2E-19 112.8 8.9 103 41-160 36-143 (246)
93 1jsx_A Glucose-inhibited divis 99.5 2.8E-14 9.5E-19 110.2 8.8 118 42-183 65-185 (207)
94 2i62_A Nicotinamide N-methyltr 99.5 8.8E-15 3E-19 116.8 5.5 147 39-185 53-238 (265)
95 2gs9_A Hypothetical protein TT 99.5 7.8E-14 2.7E-18 108.0 10.6 100 42-164 36-137 (211)
96 3q87_B N6 adenine specific DNA 99.5 9.6E-14 3.3E-18 104.8 10.8 118 41-187 22-150 (170)
97 1ri5_A MRNA capping enzyme; me 99.5 4.9E-14 1.7E-18 114.3 9.6 109 41-162 63-177 (298)
98 3dli_A Methyltransferase; PSI- 99.5 5.5E-14 1.9E-18 111.2 9.6 102 40-162 39-143 (240)
99 4dmg_A Putative uncharacterize 99.5 1.3E-13 4.3E-18 117.5 12.1 107 42-163 214-330 (393)
100 2fca_A TRNA (guanine-N(7)-)-me 99.5 3.6E-13 1.2E-17 105.2 13.8 128 42-184 38-177 (213)
101 1l3i_A Precorrin-6Y methyltran 99.5 1.5E-13 5.1E-18 104.1 11.1 122 41-181 32-155 (192)
102 1g6q_1 HnRNP arginine N-methyl 99.5 1.2E-13 4.2E-18 114.7 11.5 103 40-156 36-142 (328)
103 3u81_A Catechol O-methyltransf 99.5 1.1E-13 3.7E-18 108.4 10.6 128 42-183 58-194 (221)
104 3pfg_A N-methyltransferase; N, 99.5 6.9E-14 2.3E-18 112.0 9.4 96 42-158 50-150 (263)
105 3c0k_A UPF0064 protein YCCW; P 99.5 1E-13 3.5E-18 118.0 10.8 141 41-192 219-376 (396)
106 3bkx_A SAM-dependent methyltra 99.5 2.1E-13 7.3E-18 109.6 12.0 109 41-161 42-161 (275)
107 3tfw_A Putative O-methyltransf 99.5 3.8E-13 1.3E-17 107.4 13.3 108 42-163 63-174 (248)
108 1nt2_A Fibrillarin-like PRE-rR 99.5 1.6E-13 5.4E-18 107.2 10.8 104 42-161 57-163 (210)
109 2g72_A Phenylethanolamine N-me 99.5 6.2E-14 2.1E-18 114.0 8.8 155 40-194 69-264 (289)
110 3a27_A TYW2, uncharacterized p 99.5 1.2E-13 4.2E-18 111.9 10.6 102 41-162 118-222 (272)
111 2pxx_A Uncharacterized protein 99.5 5.8E-14 2E-18 108.5 8.1 105 41-162 41-162 (215)
112 1wzn_A SAM-dependent methyltra 99.5 9.2E-14 3.1E-18 110.4 9.4 103 42-161 41-147 (252)
113 3lbf_A Protein-L-isoaspartate 99.5 1.9E-13 6.7E-18 105.7 10.8 100 41-161 76-176 (210)
114 3gdh_A Trimethylguanosine synt 99.5 1.1E-14 3.8E-19 115.2 3.8 102 42-158 78-180 (241)
115 1zx0_A Guanidinoacetate N-meth 99.5 4.6E-14 1.6E-18 111.6 7.1 105 42-160 60-171 (236)
116 3ege_A Putative methyltransfer 99.5 7.1E-14 2.4E-18 112.2 8.1 99 41-161 33-132 (261)
117 3m33_A Uncharacterized protein 99.5 1.8E-13 6.3E-18 107.5 10.3 116 42-185 48-166 (226)
118 2vdw_A Vaccinia virus capping 99.5 1.8E-13 6.2E-18 112.6 10.7 115 42-162 48-172 (302)
119 2aot_A HMT, histamine N-methyl 99.5 1.4E-13 4.8E-18 112.2 10.0 107 42-162 52-175 (292)
120 3fpf_A Mtnas, putative unchara 99.5 4.8E-13 1.7E-17 109.5 13.0 101 41-161 121-224 (298)
121 2y1w_A Histone-arginine methyl 99.5 1.5E-13 5E-18 115.2 10.2 105 40-159 48-155 (348)
122 3duw_A OMT, O-methyltransferas 99.5 4.8E-13 1.6E-17 104.6 12.3 108 42-163 58-171 (223)
123 4df3_A Fibrillarin-like rRNA/T 99.5 6.2E-13 2.1E-17 105.5 12.7 127 40-182 75-213 (233)
124 2avn_A Ubiquinone/menaquinone 99.5 1.3E-13 4.3E-18 110.5 8.5 101 42-163 54-156 (260)
125 3ntv_A MW1564 protein; rossman 99.5 3.2E-13 1.1E-17 106.7 10.4 102 42-159 71-176 (232)
126 3tr6_A O-methyltransferase; ce 99.5 4.3E-13 1.5E-17 104.9 10.9 107 42-162 64-177 (225)
127 1nv8_A HEMK protein; class I a 99.5 2.1E-13 7E-18 111.3 9.3 106 42-163 123-253 (284)
128 3d2l_A SAM-dependent methyltra 99.5 3.2E-13 1.1E-17 106.4 10.1 101 42-160 33-138 (243)
129 1yb2_A Hypothetical protein TA 99.5 3.6E-13 1.2E-17 109.0 10.6 120 41-183 109-234 (275)
130 3ocj_A Putative exported prote 99.5 1.1E-13 3.7E-18 113.5 7.7 106 41-161 117-229 (305)
131 1o9g_A RRNA methyltransferase; 99.5 2.1E-13 7.3E-18 108.7 9.0 120 42-161 51-216 (250)
132 3orh_A Guanidinoacetate N-meth 99.5 6.5E-14 2.2E-18 111.2 5.9 105 41-159 59-170 (236)
133 1wxx_A TT1595, hypothetical pr 99.5 3E-13 1E-17 114.6 10.3 139 42-192 209-362 (382)
134 3kr9_A SAM-dependent methyltra 99.4 1E-12 3.4E-17 103.7 12.5 120 42-180 15-137 (225)
135 2pjd_A Ribosomal RNA small sub 99.4 2.3E-13 7.7E-18 113.7 9.3 103 42-162 196-306 (343)
136 2ipx_A RRNA 2'-O-methyltransfe 99.4 6.1E-13 2.1E-17 104.9 11.1 104 42-161 77-184 (233)
137 2as0_A Hypothetical protein PH 99.4 4.1E-13 1.4E-17 114.2 10.8 138 42-190 217-371 (396)
138 3lec_A NADB-rossmann superfami 99.4 1.6E-12 5.4E-17 102.9 13.1 120 42-180 21-143 (230)
139 3bgv_A MRNA CAP guanine-N7 met 99.4 4.6E-13 1.6E-17 110.1 10.4 116 42-162 34-158 (313)
140 3cc8_A Putative methyltransfer 99.4 4E-13 1.4E-17 104.6 9.4 101 41-161 31-132 (230)
141 1fbn_A MJ fibrillarin homologu 99.4 9.4E-13 3.2E-17 103.7 11.4 102 42-160 74-179 (230)
142 2r3s_A Uncharacterized protein 99.4 2.1E-12 7.1E-17 106.8 13.8 106 42-162 165-274 (335)
143 1vbf_A 231AA long hypothetical 99.4 1.7E-13 5.7E-18 107.6 6.3 128 41-192 69-197 (231)
144 3dr5_A Putative O-methyltransf 99.4 4.2E-13 1.4E-17 105.6 8.6 102 44-160 58-164 (221)
145 3gwz_A MMCR; methyltransferase 99.4 4.3E-12 1.5E-16 106.9 15.2 106 42-163 202-311 (369)
146 3gnl_A Uncharacterized protein 99.4 2.6E-12 8.9E-17 102.5 12.9 120 42-180 21-143 (244)
147 3uwp_A Histone-lysine N-methyl 99.4 2.2E-13 7.7E-18 115.8 7.1 146 42-199 173-330 (438)
148 1g8a_A Fibrillarin-like PRE-rR 99.4 9.7E-13 3.3E-17 103.1 10.3 104 42-161 73-180 (227)
149 3fzg_A 16S rRNA methylase; met 99.4 1E-13 3.4E-18 106.4 4.3 101 42-160 49-152 (200)
150 3tma_A Methyltransferase; thum 99.4 1.5E-12 5.2E-17 109.1 11.9 105 42-161 203-319 (354)
151 1vlm_A SAM-dependent methyltra 99.4 2.1E-12 7.2E-17 100.8 11.9 94 43-162 48-142 (219)
152 3bxo_A N,N-dimethyltransferase 99.4 4.4E-13 1.5E-17 105.3 8.0 99 41-160 39-142 (239)
153 2yx1_A Hypothetical protein MJ 99.4 1.6E-12 5.4E-17 108.4 11.7 100 42-163 195-295 (336)
154 3dp7_A SAM-dependent methyltra 99.4 2.4E-12 8.2E-17 108.2 12.8 108 42-162 179-290 (363)
155 3b3j_A Histone-arginine methyl 99.4 3.7E-13 1.2E-17 117.4 7.9 104 41-159 157-263 (480)
156 3c3p_A Methyltransferase; NP_9 99.4 7.2E-13 2.4E-17 102.8 8.6 102 42-160 56-161 (210)
157 3k6r_A Putative transferase PH 99.4 1.1E-12 3.8E-17 106.7 9.9 99 42-159 125-225 (278)
158 1wy7_A Hypothetical protein PH 99.4 8.3E-12 2.8E-16 96.3 14.4 126 40-188 47-177 (207)
159 2gpy_A O-methyltransferase; st 99.4 1.1E-12 3.9E-17 103.2 9.7 102 42-159 54-160 (233)
160 3mb5_A SAM-dependent methyltra 99.4 2E-12 6.7E-17 103.0 11.1 102 41-162 92-197 (255)
161 3mcz_A O-methyltransferase; ad 99.4 2.5E-12 8.4E-17 107.3 12.1 106 43-161 180-289 (352)
162 1sui_A Caffeoyl-COA O-methyltr 99.4 1.1E-12 3.8E-17 104.8 9.3 104 42-159 79-190 (247)
163 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3.4E-12 1.2E-16 101.5 12.0 118 41-180 95-218 (258)
164 3i53_A O-methyltransferase; CO 99.4 4.3E-12 1.5E-16 105.2 12.8 104 43-162 170-277 (332)
165 1ixk_A Methyltransferase; open 99.4 4.4E-12 1.5E-16 104.8 12.7 125 42-183 118-272 (315)
166 2yxe_A Protein-L-isoaspartate 99.4 2.2E-12 7.7E-17 100.1 10.4 101 41-162 76-180 (215)
167 1dl5_A Protein-L-isoaspartate 99.4 1.6E-12 5.3E-17 107.5 9.9 100 41-161 74-177 (317)
168 3r3h_A O-methyltransferase, SA 99.4 7.8E-13 2.7E-17 105.4 7.7 104 42-161 60-172 (242)
169 2yvl_A TRMI protein, hypotheti 99.4 6.7E-12 2.3E-16 99.2 13.0 103 41-162 90-193 (248)
170 4azs_A Methyltransferase WBDD; 99.4 2.5E-13 8.5E-18 120.7 5.2 105 42-159 66-173 (569)
171 3htx_A HEN1; HEN1, small RNA m 99.4 4E-12 1.4E-16 115.7 12.9 111 42-162 721-837 (950)
172 2qm3_A Predicted methyltransfe 99.4 9.6E-12 3.3E-16 105.0 14.6 106 40-161 170-280 (373)
173 3ckk_A TRNA (guanine-N(7)-)-me 99.4 5.2E-12 1.8E-16 100.2 12.2 114 42-161 46-170 (235)
174 2bm8_A Cephalosporin hydroxyla 99.4 1.2E-12 4.2E-17 103.9 8.4 122 42-183 81-216 (236)
175 3id6_C Fibrillarin-like rRNA/T 99.4 4.1E-12 1.4E-16 100.8 11.4 106 40-162 74-184 (232)
176 2h00_A Methyltransferase 10 do 99.4 6.8E-13 2.3E-17 105.8 6.9 83 42-135 65-153 (254)
177 1ne2_A Hypothetical protein TA 99.4 7.2E-12 2.5E-16 96.3 12.4 117 41-186 50-170 (200)
178 1qzz_A RDMB, aclacinomycin-10- 99.4 4.2E-12 1.4E-16 106.6 12.1 103 42-160 182-288 (374)
179 1x19_A CRTF-related protein; m 99.4 8.2E-12 2.8E-16 104.6 13.8 104 42-161 190-297 (359)
180 1o54_A SAM-dependent O-methylt 99.4 4.3E-12 1.5E-16 102.6 11.6 120 42-183 112-236 (277)
181 2vdv_E TRNA (guanine-N(7)-)-me 99.4 5E-12 1.7E-16 100.6 11.7 116 42-161 49-175 (246)
182 2avd_A Catechol-O-methyltransf 99.4 1.4E-12 5E-17 102.1 8.4 106 42-161 69-181 (229)
183 2qe6_A Uncharacterized protein 99.4 4.3E-12 1.5E-16 102.9 11.1 106 43-162 78-199 (274)
184 4e2x_A TCAB9; kijanose, tetron 99.4 3E-13 1E-17 115.4 4.4 101 42-161 107-210 (416)
185 1u2z_A Histone-lysine N-methyl 99.4 1.5E-12 5.2E-17 111.8 8.7 111 41-162 241-362 (433)
186 3opn_A Putative hemolysin; str 99.4 1.5E-12 5.2E-17 103.3 8.0 132 39-190 34-188 (232)
187 2ip2_A Probable phenazine-spec 99.4 5.7E-12 2E-16 104.4 11.9 102 44-161 169-274 (334)
188 1uwv_A 23S rRNA (uracil-5-)-me 99.4 9.6E-12 3.3E-16 107.0 13.7 125 42-185 286-413 (433)
189 2hnk_A SAM-dependent O-methylt 99.4 4.1E-12 1.4E-16 100.5 10.4 105 42-160 60-182 (239)
190 3adn_A Spermidine synthase; am 99.4 5.3E-12 1.8E-16 103.5 11.4 130 42-180 83-221 (294)
191 3mq2_A 16S rRNA methyltransfer 99.4 6.2E-13 2.1E-17 103.5 5.5 107 42-160 27-141 (218)
192 1jg1_A PIMT;, protein-L-isoasp 99.4 3.7E-12 1.3E-16 100.6 9.9 102 41-163 90-193 (235)
193 2pt6_A Spermidine synthase; tr 99.3 5.8E-12 2E-16 104.5 11.3 127 42-180 116-253 (321)
194 1ej0_A FTSJ; methyltransferase 99.3 4E-12 1.4E-16 94.7 9.1 115 42-180 22-155 (180)
195 3p2e_A 16S rRNA methylase; met 99.3 1.6E-12 5.5E-17 102.5 7.0 102 42-157 24-137 (225)
196 3ajd_A Putative methyltransfer 99.3 6.1E-12 2.1E-16 101.9 10.6 109 42-162 83-214 (274)
197 3bwc_A Spermidine synthase; SA 99.3 1E-11 3.5E-16 102.2 11.6 132 42-182 95-236 (304)
198 2jjq_A Uncharacterized RNA met 99.3 1.5E-11 5.1E-16 105.7 13.0 98 42-160 290-388 (425)
199 3c3y_A Pfomt, O-methyltransfer 99.3 4.3E-12 1.5E-16 100.6 8.8 104 42-159 70-181 (237)
200 1tw3_A COMT, carminomycin 4-O- 99.3 9.1E-12 3.1E-16 104.2 11.1 104 42-161 183-290 (360)
201 3cbg_A O-methyltransferase; cy 99.3 2.7E-12 9.4E-17 101.4 7.5 107 42-162 72-185 (232)
202 2pbf_A Protein-L-isoaspartate 99.3 7.2E-12 2.5E-16 98.1 9.5 109 40-161 78-195 (227)
203 1inl_A Spermidine synthase; be 99.3 1.4E-11 4.7E-16 101.0 11.4 126 42-179 90-227 (296)
204 1i9g_A Hypothetical protein RV 99.3 1.5E-11 5E-16 99.3 11.2 103 41-162 98-206 (280)
205 1iy9_A Spermidine synthase; ro 99.3 2.3E-11 8E-16 98.7 11.8 129 42-180 75-212 (275)
206 2o07_A Spermidine synthase; st 99.3 1.7E-11 5.9E-16 100.9 10.7 125 42-178 95-230 (304)
207 3hp7_A Hemolysin, putative; st 99.3 1.5E-11 5.1E-16 100.5 10.0 129 40-188 83-234 (291)
208 3dou_A Ribosomal RNA large sub 99.3 1.7E-11 5.9E-16 94.2 9.9 115 42-180 25-158 (191)
209 1uir_A Polyamine aminopropyltr 99.3 3E-11 1E-15 99.8 12.0 128 42-179 77-218 (314)
210 1af7_A Chemotaxis receptor met 99.3 7.1E-12 2.4E-16 101.8 8.1 116 42-159 105-252 (274)
211 2zfu_A Nucleomethylin, cerebra 99.3 9.5E-12 3.2E-16 96.5 8.5 110 41-183 66-176 (215)
212 1p91_A Ribosomal RNA large sub 99.3 1.1E-11 3.7E-16 99.5 8.7 96 42-164 85-183 (269)
213 3tm4_A TRNA (guanine N2-)-meth 99.3 2.3E-11 7.9E-16 102.7 10.7 101 42-157 217-328 (373)
214 1mjf_A Spermidine synthase; sp 99.3 2.1E-11 7.2E-16 99.2 9.9 131 42-179 75-215 (281)
215 1i1n_A Protein-L-isoaspartate 99.3 1.4E-11 4.8E-16 96.3 8.5 105 41-161 76-184 (226)
216 1xj5_A Spermidine synthase 1; 99.3 1.9E-11 6.4E-16 101.9 9.5 107 42-159 120-235 (334)
217 3lst_A CALO1 methyltransferase 99.2 1.3E-11 4.5E-16 103.1 7.9 101 42-161 184-288 (348)
218 2i7c_A Spermidine synthase; tr 99.2 3.8E-11 1.3E-15 97.8 10.1 129 42-180 78-215 (283)
219 2b2c_A Spermidine synthase; be 99.2 1.9E-11 6.5E-16 101.1 8.4 106 42-159 108-222 (314)
220 1r18_A Protein-L-isoaspartate( 99.2 3.8E-11 1.3E-15 94.1 9.7 105 41-161 83-196 (227)
221 2plw_A Ribosomal RNA methyltra 99.2 7.6E-11 2.6E-15 90.3 10.6 114 42-179 22-172 (201)
222 2b25_A Hypothetical protein; s 99.2 1.3E-10 4.4E-15 96.5 12.6 114 41-161 104-221 (336)
223 3m4x_A NOL1/NOP2/SUN family pr 99.2 6.2E-11 2.1E-15 102.5 10.7 126 42-183 105-260 (456)
224 3bt7_A TRNA (uracil-5-)-methyl 99.2 3.5E-11 1.2E-15 101.5 8.6 124 42-185 213-350 (369)
225 3gjy_A Spermidine synthase; AP 99.2 8.1E-11 2.8E-15 97.2 10.2 123 44-179 91-221 (317)
226 3m6w_A RRNA methylase; rRNA me 99.2 6.5E-11 2.2E-15 102.5 10.0 127 42-184 101-257 (464)
227 2f8l_A Hypothetical protein LM 99.2 8E-11 2.7E-15 98.2 10.1 103 42-161 130-258 (344)
228 2nyu_A Putative ribosomal RNA 99.2 5.3E-11 1.8E-15 90.8 8.3 113 42-178 22-162 (196)
229 3lcv_B Sisomicin-gentamicin re 99.2 7.5E-11 2.6E-15 94.5 9.4 100 43-161 133-237 (281)
230 3axs_A Probable N(2),N(2)-dime 99.2 3.9E-11 1.3E-15 101.9 8.0 101 42-159 52-158 (392)
231 2frx_A Hypothetical protein YE 99.2 1.2E-10 4.2E-15 101.4 11.2 106 42-161 117-248 (479)
232 2dul_A N(2),N(2)-dimethylguano 99.2 6.6E-11 2.2E-15 100.2 9.3 100 42-159 47-164 (378)
233 4a6d_A Hydroxyindole O-methylt 99.2 1.7E-10 5.7E-15 96.7 11.6 102 43-161 180-285 (353)
234 2cmg_A Spermidine synthase; tr 99.2 6.7E-11 2.3E-15 95.4 8.8 122 42-184 72-198 (262)
235 1zq9_A Probable dimethyladenos 99.2 2.2E-11 7.7E-16 99.2 5.7 77 42-134 28-105 (285)
236 2h1r_A Dimethyladenosine trans 99.2 1.1E-10 3.8E-15 95.7 9.3 76 42-134 42-118 (299)
237 2yxl_A PH0851 protein, 450AA l 99.2 2.5E-10 8.5E-15 98.7 11.9 129 42-184 259-417 (450)
238 1sqg_A SUN protein, FMU protei 99.1 2.1E-10 7.3E-15 98.5 10.9 107 42-162 246-377 (429)
239 3frh_A 16S rRNA methylase; met 99.1 2.7E-10 9.4E-15 90.3 10.5 101 41-160 104-206 (253)
240 1fp2_A Isoflavone O-methyltran 99.1 1.4E-10 4.6E-15 97.0 9.1 97 42-162 188-291 (352)
241 2wa2_A Non-structural protein 99.1 2E-11 7E-16 99.2 3.7 120 42-178 82-212 (276)
242 2oxt_A Nucleoside-2'-O-methylt 99.1 3.5E-11 1.2E-15 97.2 4.7 120 42-178 74-204 (265)
243 3ll7_A Putative methyltransfer 99.1 1.5E-10 5.1E-15 98.7 7.3 79 43-134 94-175 (410)
244 2r6z_A UPF0341 protein in RSP 99.1 3.5E-10 1.2E-14 91.0 8.8 81 42-134 83-173 (258)
245 1fp1_D Isoliquiritigenin 2'-O- 99.1 2E-10 6.7E-15 96.7 7.3 96 42-161 209-308 (372)
246 3k0b_A Predicted N6-adenine-sp 99.1 5.1E-10 1.7E-14 95.2 9.5 105 42-161 201-352 (393)
247 3ldu_A Putative methylase; str 99.1 5E-10 1.7E-14 95.0 9.3 105 42-161 195-346 (385)
248 3ldg_A Putative uncharacterize 99.0 1E-09 3.5E-14 93.1 10.5 105 42-161 194-345 (384)
249 3reo_A (ISO)eugenol O-methyltr 99.0 5.8E-10 2E-14 93.9 8.6 96 42-161 203-302 (368)
250 2okc_A Type I restriction enzy 99.0 1.6E-09 5.4E-14 93.5 11.0 106 42-161 171-309 (445)
251 2ld4_A Anamorsin; methyltransf 99.0 8.2E-10 2.8E-14 83.0 8.2 110 41-181 11-130 (176)
252 1zg3_A Isoflavanone 4'-O-methy 99.0 5.8E-10 2E-14 93.3 7.8 96 42-161 193-295 (358)
253 3giw_A Protein of unknown func 99.0 1.9E-09 6.5E-14 87.2 10.4 108 44-163 80-204 (277)
254 2p41_A Type II methyltransfera 99.0 3.1E-10 1E-14 93.5 5.8 115 42-176 82-208 (305)
255 2ih2_A Modification methylase 99.0 1.1E-09 3.9E-14 93.1 9.1 96 42-162 39-167 (421)
256 3p9c_A Caffeic acid O-methyltr 99.0 9.3E-10 3.2E-14 92.5 8.2 97 42-162 201-301 (364)
257 3gru_A Dimethyladenosine trans 99.0 1.5E-09 5.2E-14 88.8 9.2 77 41-134 49-126 (295)
258 3sso_A Methyltransferase; macr 99.0 4E-10 1.4E-14 95.6 5.6 102 38-161 212-326 (419)
259 3tqs_A Ribosomal RNA small sub 99.0 9.6E-10 3.3E-14 88.3 7.2 78 42-134 29-108 (255)
260 2b9e_A NOL1/NOP2/SUN domain fa 98.9 1.1E-08 3.9E-13 84.2 12.8 79 42-132 102-184 (309)
261 1qam_A ERMC' methyltransferase 98.9 2.5E-09 8.6E-14 85.1 8.5 75 42-133 30-105 (244)
262 2qfm_A Spermine synthase; sper 98.9 2.5E-09 8.5E-14 89.6 7.6 132 42-178 188-334 (364)
263 1yub_A Ermam, rRNA methyltrans 98.9 2.2E-11 7.7E-16 96.9 -5.1 76 42-134 29-105 (245)
264 3fut_A Dimethyladenosine trans 98.9 3.3E-09 1.1E-13 85.9 7.5 76 42-135 47-123 (271)
265 2oyr_A UPF0341 protein YHIQ; a 98.8 6.1E-09 2.1E-13 83.7 7.5 85 44-134 90-176 (258)
266 2ar0_A M.ecoki, type I restric 98.8 1.1E-08 3.9E-13 90.2 9.9 130 42-180 169-336 (541)
267 3lkd_A Type I restriction-modi 98.8 6.2E-08 2.1E-12 85.5 13.2 131 41-181 220-383 (542)
268 4gqb_A Protein arginine N-meth 98.8 7E-09 2.4E-13 92.7 6.9 103 37-154 352-462 (637)
269 3v97_A Ribosomal RNA large sub 98.8 2.2E-08 7.6E-13 90.9 10.0 107 42-160 190-348 (703)
270 3uzu_A Ribosomal RNA small sub 98.7 3.7E-08 1.3E-12 80.0 7.7 77 42-134 42-126 (279)
271 3s1s_A Restriction endonucleas 98.7 2.5E-07 8.4E-12 84.4 13.8 133 42-184 321-494 (878)
272 2xyq_A Putative 2'-O-methyl tr 98.7 4.1E-08 1.4E-12 80.2 7.8 107 41-179 62-190 (290)
273 3ftd_A Dimethyladenosine trans 98.6 1.1E-07 3.7E-12 75.9 8.4 74 42-133 31-106 (249)
274 1qyr_A KSGA, high level kasuga 98.6 2.3E-08 7.9E-13 80.0 3.7 77 42-134 21-102 (252)
275 1m6y_A S-adenosyl-methyltransf 98.6 6.2E-08 2.1E-12 79.5 6.4 77 42-131 26-107 (301)
276 3cvo_A Methyltransferase-like 98.6 1E-06 3.4E-11 68.2 12.7 131 42-188 30-187 (202)
277 3khk_A Type I restriction-modi 98.5 3E-07 1E-11 81.2 9.8 124 45-181 247-421 (544)
278 3ua3_A Protein arginine N-meth 98.5 1.2E-07 4E-12 85.2 7.0 100 43-154 410-529 (745)
279 2oo3_A Protein involved in cat 98.4 1.3E-07 4.5E-12 76.5 4.4 120 42-175 91-214 (283)
280 3b5i_A S-adenosyl-L-methionine 98.4 1.4E-06 4.8E-11 73.4 9.0 122 41-164 51-230 (374)
281 2efj_A 3,7-dimethylxanthine me 98.3 9.2E-06 3.2E-10 68.6 11.6 112 43-165 53-231 (384)
282 3o4f_A Spermidine synthase; am 98.2 2.3E-05 7.9E-10 63.8 13.1 131 42-182 83-223 (294)
283 2qy6_A UPF0209 protein YFCK; s 98.2 7.8E-06 2.7E-10 65.5 9.8 135 42-185 60-234 (257)
284 3evf_A RNA-directed RNA polyme 98.1 3.1E-05 1.1E-09 62.3 10.8 127 42-187 74-213 (277)
285 1m6e_X S-adenosyl-L-methionnin 98.0 5.4E-06 1.9E-10 69.4 5.5 112 42-164 51-214 (359)
286 2zig_A TTHA0409, putative modi 97.9 1.5E-05 5E-10 65.0 6.2 45 42-86 235-280 (297)
287 3gcz_A Polyprotein; flavivirus 97.9 1E-05 3.5E-10 65.2 4.8 127 42-187 90-230 (282)
288 4auk_A Ribosomal RNA large sub 97.9 3.1E-05 1.1E-09 64.9 7.8 85 42-151 211-295 (375)
289 3ufb_A Type I restriction-modi 97.8 0.00044 1.5E-08 60.8 14.7 128 42-181 217-387 (530)
290 4fzv_A Putative methyltransfer 97.8 0.00011 3.9E-09 61.4 10.4 126 42-175 148-304 (359)
291 3eld_A Methyltransferase; flav 97.8 5.5E-05 1.9E-09 61.3 6.8 128 41-187 80-220 (300)
292 2wk1_A NOVP; transferase, O-me 97.7 8.9E-05 3.1E-09 60.1 7.7 105 43-161 107-246 (282)
293 2px2_A Genome polyprotein [con 97.7 0.00024 8.3E-09 56.5 9.0 121 42-179 73-203 (269)
294 2k4m_A TR8_protein, UPF0146 pr 97.6 5.4E-05 1.8E-09 55.3 4.2 32 43-74 36-69 (153)
295 3c6k_A Spermine synthase; sper 97.6 0.00011 3.9E-09 61.7 6.4 132 42-178 205-351 (381)
296 1g60_A Adenine-specific methyl 97.5 0.00012 4.2E-09 58.3 5.8 46 42-87 212-258 (260)
297 1wg8_A Predicted S-adenosylmet 97.3 0.00022 7.7E-09 57.5 5.2 72 42-129 22-96 (285)
298 3p8z_A Mtase, non-structural p 97.2 0.00019 6.4E-09 56.5 3.4 113 42-176 78-203 (267)
299 1g55_A DNA cytosine methyltran 97.2 0.00026 9E-09 58.8 4.2 73 43-132 2-78 (343)
300 3g7u_A Cytosine-specific methy 97.2 0.00072 2.5E-08 56.9 6.9 72 44-132 3-81 (376)
301 2c7p_A Modification methylase 97.2 0.001 3.4E-08 54.9 7.7 75 37-132 5-81 (327)
302 3lkz_A Non-structural protein 97.0 0.00079 2.7E-08 54.6 5.0 31 42-72 94-126 (321)
303 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0083 2.9E-07 48.7 10.6 111 42-182 109-237 (344)
304 2vz8_A Fatty acid synthase; tr 96.6 0.00087 3E-08 68.5 3.0 100 43-159 1241-1348(2512)
305 4h0n_A DNMT2; SAH binding, tra 96.3 0.0053 1.8E-07 50.7 5.5 72 44-132 4-79 (333)
306 1i4w_A Mitochondrial replicati 96.2 0.0065 2.2E-07 50.6 5.4 55 42-111 58-115 (353)
307 2qrv_A DNA (cytosine-5)-methyl 95.9 0.0088 3E-07 48.6 5.0 74 42-132 15-93 (295)
308 3ubt_Y Modification methylase 95.9 0.018 6.1E-07 47.0 6.9 69 44-132 1-71 (331)
309 3qv2_A 5-cytosine DNA methyltr 95.7 0.014 4.8E-07 48.1 5.4 120 43-180 10-154 (327)
310 2py6_A Methyltransferase FKBM; 95.6 0.037 1.3E-06 46.9 7.9 45 41-85 225-274 (409)
311 1boo_A Protein (N-4 cytosine-s 95.4 0.014 4.9E-07 47.8 4.6 44 42-85 252-296 (323)
312 1eg2_A Modification methylase 95.1 0.026 9E-07 46.2 5.2 45 42-86 242-290 (319)
313 1rjd_A PPM1P, carboxy methyl t 94.9 0.2 6.9E-06 41.2 10.1 119 43-162 98-235 (334)
314 3is3_A 17BETA-hydroxysteroid d 94.8 0.23 7.9E-06 39.0 9.8 110 37-159 12-152 (270)
315 3m6i_A L-arabinitol 4-dehydrog 94.7 0.057 1.9E-06 44.5 6.2 97 41-159 178-283 (363)
316 4hp8_A 2-deoxy-D-gluconate 3-d 94.5 0.17 5.8E-06 39.9 8.3 83 37-133 3-90 (247)
317 1f8f_A Benzyl alcohol dehydrog 94.3 0.017 5.7E-07 48.0 2.2 93 41-159 189-289 (371)
318 3v2g_A 3-oxoacyl-[acyl-carrier 94.3 0.48 1.6E-05 37.3 10.6 83 38-133 26-120 (271)
319 3vyw_A MNMC2; tRNA wobble urid 94.1 0.56 1.9E-05 38.1 10.7 59 121-185 185-247 (308)
320 1pl8_A Human sorbitol dehydrog 94.1 0.031 1.1E-06 46.1 3.3 93 41-159 170-273 (356)
321 3pxx_A Carveol dehydrogenase; 94.0 0.47 1.6E-05 37.2 10.1 82 39-133 6-110 (287)
322 3s2e_A Zinc-containing alcohol 94.0 0.067 2.3E-06 43.6 5.1 93 40-158 164-262 (340)
323 3fpc_A NADP-dependent alcohol 93.9 0.016 5.4E-07 47.7 1.2 92 41-158 165-265 (352)
324 3ijr_A Oxidoreductase, short c 93.8 0.47 1.6E-05 37.7 9.8 81 39-132 43-135 (291)
325 1e3j_A NADP(H)-dependent ketos 93.8 0.2 6.8E-06 41.0 7.7 93 41-159 167-271 (352)
326 1kol_A Formaldehyde dehydrogen 93.8 0.24 8.1E-06 41.3 8.3 97 41-158 184-299 (398)
327 1uuf_A YAHK, zinc-type alcohol 93.8 0.04 1.4E-06 45.8 3.4 92 41-158 193-287 (369)
328 2uyo_A Hypothetical protein ML 93.7 0.52 1.8E-05 38.3 9.9 109 44-162 104-221 (310)
329 3tka_A Ribosomal RNA small sub 93.6 0.056 1.9E-06 44.6 3.9 39 42-80 57-99 (347)
330 4fs3_A Enoyl-[acyl-carrier-pro 93.6 0.64 2.2E-05 36.2 10.0 80 40-131 3-95 (256)
331 4g81_D Putative hexonate dehyd 93.5 0.24 8.3E-06 39.1 7.3 82 40-134 6-98 (255)
332 3oig_A Enoyl-[acyl-carrier-pro 93.4 0.7 2.4E-05 35.9 10.0 81 40-132 4-97 (266)
333 4fn4_A Short chain dehydrogena 93.3 0.18 6E-06 39.9 6.3 80 40-132 4-94 (254)
334 2zig_A TTHA0409, putative modi 93.1 0.062 2.1E-06 43.3 3.4 59 101-160 20-98 (297)
335 4ej6_A Putative zinc-binding d 93.0 0.12 3.9E-06 42.9 5.0 93 41-159 181-284 (370)
336 4dvj_A Putative zinc-dependent 92.9 0.14 4.8E-06 42.3 5.3 91 42-158 171-269 (363)
337 3o38_A Short chain dehydrogena 92.6 0.44 1.5E-05 37.1 7.7 83 39-133 18-112 (266)
338 4dcm_A Ribosomal RNA large sub 92.6 1.3 4.4E-05 36.8 10.9 104 42-164 38-141 (375)
339 4fc7_A Peroxisomal 2,4-dienoyl 92.5 0.42 1.5E-05 37.6 7.5 85 36-132 20-115 (277)
340 3uf0_A Short-chain dehydrogena 92.3 0.36 1.2E-05 38.1 6.8 83 38-133 26-117 (273)
341 1xg5_A ARPG836; short chain de 92.2 1.3 4.5E-05 34.6 10.0 83 39-132 28-121 (279)
342 3gms_A Putative NADPH:quinone 92.1 0.047 1.6E-06 44.6 1.5 42 40-81 142-187 (340)
343 1g0o_A Trihydroxynaphthalene r 92.1 1.2 4E-05 35.0 9.7 81 40-133 26-118 (283)
344 3lf2_A Short chain oxidoreduct 92.0 1.6 5.4E-05 34.0 10.3 84 38-133 3-98 (265)
345 3grk_A Enoyl-(acyl-carrier-pro 92.0 1.4 4.8E-05 35.0 10.1 81 39-133 27-120 (293)
346 3gaf_A 7-alpha-hydroxysteroid 91.9 0.37 1.3E-05 37.5 6.4 83 38-133 7-100 (256)
347 2cf5_A Atccad5, CAD, cinnamyl 91.9 0.049 1.7E-06 44.9 1.4 39 42-80 180-221 (357)
348 3t7c_A Carveol dehydrogenase; 91.9 1.6 5.5E-05 34.7 10.4 80 40-132 25-127 (299)
349 1pqw_A Polyketide synthase; ro 91.9 0.029 9.9E-07 42.0 -0.1 91 41-158 37-136 (198)
350 3k31_A Enoyl-(acyl-carrier-pro 91.9 0.91 3.1E-05 36.1 8.8 82 38-133 25-119 (296)
351 4iin_A 3-ketoacyl-acyl carrier 91.8 0.45 1.5E-05 37.3 6.9 84 37-133 23-118 (271)
352 3sx2_A Putative 3-ketoacyl-(ac 91.8 0.91 3.1E-05 35.5 8.7 82 39-133 9-113 (278)
353 3ip1_A Alcohol dehydrogenase, 91.8 0.13 4.4E-06 43.2 3.8 41 40-80 211-255 (404)
354 3ek2_A Enoyl-(acyl-carrier-pro 91.8 0.77 2.6E-05 35.6 8.2 82 38-133 9-103 (271)
355 4eso_A Putative oxidoreductase 91.8 0.76 2.6E-05 35.7 8.1 78 40-133 5-93 (255)
356 2d8a_A PH0655, probable L-thre 91.7 0.058 2E-06 44.2 1.6 91 42-158 167-266 (348)
357 3fbg_A Putative arginate lyase 91.7 0.17 5.9E-06 41.3 4.4 90 42-157 150-246 (346)
358 3r3s_A Oxidoreductase; structu 91.6 1.2 4.1E-05 35.4 9.3 81 39-132 45-138 (294)
359 2fzw_A Alcohol dehydrogenase c 91.6 0.37 1.3E-05 39.7 6.4 92 41-158 189-291 (373)
360 3qiv_A Short-chain dehydrogena 91.5 0.38 1.3E-05 37.1 6.1 81 39-132 5-96 (253)
361 4dry_A 3-oxoacyl-[acyl-carrier 91.5 0.32 1.1E-05 38.5 5.8 83 38-132 28-121 (281)
362 3uko_A Alcohol dehydrogenase c 91.5 0.084 2.9E-06 43.8 2.3 92 41-158 192-294 (378)
363 3o26_A Salutaridine reductase; 91.5 0.44 1.5E-05 37.7 6.5 82 40-133 9-102 (311)
364 3u5t_A 3-oxoacyl-[acyl-carrier 91.5 0.79 2.7E-05 35.9 7.9 81 40-133 24-116 (267)
365 3ioy_A Short-chain dehydrogena 91.4 1 3.4E-05 36.4 8.7 82 40-132 5-97 (319)
366 3ucx_A Short chain dehydrogena 91.4 0.56 1.9E-05 36.6 7.1 80 40-132 8-98 (264)
367 3ksu_A 3-oxoacyl-acyl carrier 91.4 1 3.4E-05 35.1 8.5 82 39-133 7-102 (262)
368 1yqd_A Sinapyl alcohol dehydro 91.4 0.082 2.8E-06 43.7 2.2 39 42-80 187-228 (366)
369 4egf_A L-xylulose reductase; s 91.3 0.76 2.6E-05 35.9 7.7 82 40-133 17-109 (266)
370 3jv7_A ADH-A; dehydrogenase, n 91.3 0.19 6.6E-06 40.9 4.3 94 40-159 169-270 (345)
371 3r1i_A Short-chain type dehydr 91.1 0.41 1.4E-05 37.8 6.0 82 39-133 28-120 (276)
372 3qwb_A Probable quinone oxidor 91.1 0.057 2E-06 44.0 0.9 92 40-158 146-246 (334)
373 3tjr_A Short chain dehydrogena 91.1 0.62 2.1E-05 37.2 7.0 81 40-133 28-119 (301)
374 3jyn_A Quinone oxidoreductase; 91.0 0.061 2.1E-06 43.7 1.0 92 41-159 139-239 (325)
375 4fgs_A Probable dehydrogenase 90.9 0.9 3.1E-05 36.2 7.7 77 40-132 26-113 (273)
376 3h7a_A Short chain dehydrogena 90.8 0.48 1.7E-05 36.8 6.1 79 41-133 5-94 (252)
377 3pk0_A Short-chain dehydrogena 90.8 0.5 1.7E-05 36.9 6.1 83 39-133 6-99 (262)
378 3nx4_A Putative oxidoreductase 90.6 1 3.5E-05 36.1 8.0 87 45-158 149-240 (324)
379 3gvc_A Oxidoreductase, probabl 90.6 1.7 5.9E-05 34.2 9.2 79 39-133 25-114 (277)
380 3tqh_A Quinone oxidoreductase; 90.4 0.47 1.6E-05 38.2 5.9 91 41-158 151-244 (321)
381 3imf_A Short chain dehydrogena 90.4 0.42 1.4E-05 37.1 5.4 80 40-132 3-93 (257)
382 3edm_A Short chain dehydrogena 90.4 0.81 2.8E-05 35.6 7.0 80 40-132 5-96 (259)
383 2x9g_A PTR1, pteridine reducta 90.3 1.7 6E-05 34.1 9.0 81 40-132 20-116 (288)
384 3l77_A Short-chain alcohol deh 90.3 1.3 4.3E-05 33.6 8.0 80 42-133 1-91 (235)
385 3i1j_A Oxidoreductase, short c 90.2 0.59 2E-05 35.8 6.0 84 37-132 8-104 (247)
386 4imr_A 3-oxoacyl-(acyl-carrier 90.2 0.71 2.4E-05 36.4 6.6 80 40-132 30-119 (275)
387 2dq4_A L-threonine 3-dehydroge 90.2 0.035 1.2E-06 45.5 -1.1 90 42-158 164-261 (343)
388 3c85_A Putative glutathione-re 90.2 2.3 7.7E-05 31.0 9.0 39 40-78 36-78 (183)
389 2jah_A Clavulanic acid dehydro 90.2 0.76 2.6E-05 35.4 6.7 80 40-132 4-94 (247)
390 1xu9_A Corticosteroid 11-beta- 90.1 0.45 1.5E-05 37.5 5.4 81 37-129 22-113 (286)
391 3f1l_A Uncharacterized oxidore 90.1 0.71 2.4E-05 35.7 6.5 83 38-132 7-102 (252)
392 1ae1_A Tropinone reductase-I; 90.1 0.91 3.1E-05 35.5 7.2 80 40-132 18-109 (273)
393 4a2c_A Galactitol-1-phosphate 90.1 0.18 6E-06 41.1 3.0 94 41-160 159-261 (346)
394 3lyl_A 3-oxoacyl-(acyl-carrier 90.0 1.7 5.7E-05 33.2 8.5 80 41-133 3-93 (247)
395 1v3u_A Leukotriene B4 12- hydr 90.0 0.31 1.1E-05 39.5 4.4 91 41-158 144-243 (333)
396 1boo_A Protein (N-4 cytosine-s 90.0 0.23 7.7E-06 40.5 3.6 60 102-162 14-87 (323)
397 4dqx_A Probable oxidoreductase 89.9 2.9 9.9E-05 32.8 10.0 82 36-133 20-112 (277)
398 2b5w_A Glucose dehydrogenase; 89.9 0.96 3.3E-05 37.0 7.4 89 44-159 174-273 (357)
399 2ae2_A Protein (tropinone redu 89.9 0.93 3.2E-05 35.1 7.0 79 41-132 7-97 (260)
400 3tfo_A Putative 3-oxoacyl-(acy 89.8 0.78 2.7E-05 36.0 6.5 79 42-133 3-92 (264)
401 3me5_A Cytosine-specific methy 89.8 0.36 1.2E-05 41.8 4.8 41 43-83 88-130 (482)
402 4da9_A Short-chain dehydrogena 89.8 1.2 4E-05 35.1 7.6 81 39-132 25-117 (280)
403 1xhl_A Short-chain dehydrogena 89.6 2.2 7.5E-05 33.9 9.2 82 41-132 24-116 (297)
404 1yb1_A 17-beta-hydroxysteroid 89.6 0.96 3.3E-05 35.3 6.9 83 38-133 26-119 (272)
405 3pgx_A Carveol dehydrogenase; 89.5 0.95 3.3E-05 35.5 6.9 82 39-133 11-116 (280)
406 3ftp_A 3-oxoacyl-[acyl-carrier 89.3 0.63 2.1E-05 36.6 5.6 81 40-133 25-116 (270)
407 4b7c_A Probable oxidoreductase 89.3 0.079 2.7E-06 43.1 0.3 93 40-158 147-247 (336)
408 3rkr_A Short chain oxidoreduct 89.2 0.94 3.2E-05 35.2 6.6 82 38-132 24-116 (262)
409 1g60_A Adenine-specific methyl 89.0 0.25 8.5E-06 38.9 3.0 40 120-159 21-74 (260)
410 4ibo_A Gluconate dehydrogenase 89.0 0.67 2.3E-05 36.4 5.6 81 40-133 23-114 (271)
411 1geg_A Acetoin reductase; SDR 88.9 2.1 7.2E-05 33.0 8.4 77 43-132 2-89 (256)
412 4eez_A Alcohol dehydrogenase 1 88.9 0.27 9.3E-06 40.0 3.3 93 41-159 162-263 (348)
413 3uve_A Carveol dehydrogenase ( 88.8 0.88 3E-05 35.8 6.2 80 40-132 8-114 (286)
414 3kvo_A Hydroxysteroid dehydrog 88.7 2.9 0.0001 34.1 9.5 84 37-133 39-140 (346)
415 1ja9_A 4HNR, 1,3,6,8-tetrahydr 88.7 1.7 6E-05 33.5 7.8 80 40-132 18-109 (274)
416 3e03_A Short chain dehydrogena 88.3 2.8 9.7E-05 32.7 8.9 81 40-133 3-101 (274)
417 3fwz_A Inner membrane protein 88.3 3.1 0.00011 28.9 8.3 92 44-157 8-103 (140)
418 4gkb_A 3-oxoacyl-[acyl-carrier 88.1 1 3.6E-05 35.4 6.1 80 40-133 4-94 (258)
419 2qq5_A DHRS1, dehydrogenase/re 88.1 1.8 6.2E-05 33.4 7.5 77 41-130 3-91 (260)
420 3tsc_A Putative oxidoreductase 88.0 2.1 7.1E-05 33.5 7.9 81 40-133 8-112 (277)
421 3llv_A Exopolyphosphatase-rela 88.0 4.4 0.00015 27.9 8.9 70 43-131 6-79 (141)
422 3awd_A GOX2181, putative polyo 88.0 1.2 3.9E-05 34.3 6.3 80 40-132 10-100 (260)
423 3s55_A Putative short-chain de 87.8 1.4 4.7E-05 34.6 6.7 82 39-133 6-110 (281)
424 3e8x_A Putative NAD-dependent 87.7 3.5 0.00012 31.1 8.8 78 37-136 15-98 (236)
425 4dmm_A 3-oxoacyl-[acyl-carrier 87.7 1.4 4.8E-05 34.5 6.7 81 40-133 25-117 (269)
426 2zat_A Dehydrogenase/reductase 87.6 1.3 4.4E-05 34.2 6.4 81 39-132 10-101 (260)
427 4dup_A Quinone oxidoreductase; 87.6 0.16 5.6E-06 41.7 1.1 91 41-158 166-264 (353)
428 2rhc_B Actinorhodin polyketide 87.5 1.3 4.4E-05 34.8 6.4 80 40-132 19-109 (277)
429 1fmc_A 7 alpha-hydroxysteroid 87.5 1.1 3.6E-05 34.3 5.8 80 40-132 8-98 (255)
430 1vl8_A Gluconate 5-dehydrogena 87.4 1.5 5.3E-05 34.1 6.8 82 38-132 16-109 (267)
431 2gdz_A NAD+-dependent 15-hydro 87.4 2.6 8.9E-05 32.6 8.1 90 41-141 5-105 (267)
432 3sju_A Keto reductase; short-c 87.3 1.3 4.3E-05 34.9 6.2 81 40-133 21-112 (279)
433 1iy8_A Levodione reductase; ox 87.3 1.3 4.5E-05 34.4 6.2 82 40-132 10-102 (267)
434 1zem_A Xylitol dehydrogenase; 87.3 1.3 4.6E-05 34.3 6.3 79 41-132 5-94 (262)
435 3t4x_A Oxidoreductase, short c 87.2 1.4 4.9E-05 34.3 6.5 83 40-133 7-96 (267)
436 4b79_A PA4098, probable short- 87.2 0.72 2.5E-05 36.1 4.6 78 36-132 4-88 (242)
437 3v8b_A Putative dehydrogenase, 87.2 0.89 3E-05 36.0 5.3 82 38-132 23-115 (283)
438 1xq1_A Putative tropinone redu 87.2 1.8 6.3E-05 33.3 7.0 80 40-132 11-102 (266)
439 3tox_A Short chain dehydrogena 87.2 0.49 1.7E-05 37.5 3.7 81 40-133 5-96 (280)
440 3oec_A Carveol dehydrogenase ( 87.1 1.2 4.1E-05 35.8 6.1 82 39-133 42-146 (317)
441 2dph_A Formaldehyde dismutase; 86.9 0.61 2.1E-05 38.8 4.3 97 41-158 184-298 (398)
442 3nyw_A Putative oxidoreductase 86.9 1.8 6E-05 33.5 6.7 83 41-133 5-98 (250)
443 1qor_A Quinone oxidoreductase; 86.8 0.16 5.6E-06 41.0 0.7 91 41-158 139-238 (327)
444 3ai3_A NADPH-sorbose reductase 86.7 1.7 5.7E-05 33.6 6.5 81 41-133 5-96 (263)
445 3f9i_A 3-oxoacyl-[acyl-carrier 86.5 1.2 4.2E-05 34.0 5.7 79 38-132 9-94 (249)
446 3svt_A Short-chain type dehydr 86.5 1.4 4.8E-05 34.5 6.1 83 40-132 8-101 (281)
447 3gaz_A Alcohol dehydrogenase s 86.5 0.58 2E-05 38.1 3.9 89 41-158 149-245 (343)
448 3v2h_A D-beta-hydroxybutyrate 86.4 1.4 4.8E-05 34.7 6.0 83 39-133 21-115 (281)
449 3cxt_A Dehydrogenase with diff 86.3 1.1 3.9E-05 35.5 5.5 82 38-132 29-121 (291)
450 3rwb_A TPLDH, pyridoxal 4-dehy 86.2 1.3 4.6E-05 34.0 5.7 78 40-133 3-91 (247)
451 2c07_A 3-oxoacyl-(acyl-carrier 86.1 2 6.7E-05 33.8 6.8 81 40-133 41-132 (285)
452 3rih_A Short chain dehydrogena 86.1 1.2 4.3E-05 35.4 5.6 83 39-133 37-130 (293)
453 3op4_A 3-oxoacyl-[acyl-carrier 86.0 1.3 4.6E-05 34.1 5.6 78 40-133 6-94 (248)
454 1tt7_A YHFP; alcohol dehydroge 86.0 1.4 4.7E-05 35.5 5.9 90 45-158 153-246 (330)
455 4e6p_A Probable sorbitol dehyd 86.0 2 6.8E-05 33.2 6.6 78 40-133 5-93 (259)
456 1zk4_A R-specific alcohol dehy 85.9 2.6 8.9E-05 32.0 7.3 78 41-132 4-92 (251)
457 2uvd_A 3-oxoacyl-(acyl-carrier 85.9 1.5 5.3E-05 33.5 5.9 79 41-132 2-92 (246)
458 3qlj_A Short chain dehydrogena 85.9 1.2 4.1E-05 35.8 5.4 82 39-133 23-125 (322)
459 1xa0_A Putative NADPH dependen 85.7 1.2 4E-05 35.9 5.3 87 45-158 152-245 (328)
460 1yb5_A Quinone oxidoreductase; 85.6 0.23 7.8E-06 40.8 1.0 91 41-158 169-268 (351)
461 1e7w_A Pteridine reductase; di 85.5 2.1 7.1E-05 33.8 6.7 62 40-114 6-73 (291)
462 1xkq_A Short-chain reductase f 85.4 1.5 5.2E-05 34.3 5.7 82 41-132 4-96 (280)
463 2q2v_A Beta-D-hydroxybutyrate 85.3 3.4 0.00012 31.7 7.7 78 41-132 2-89 (255)
464 3icc_A Putative 3-oxoacyl-(acy 85.3 1.7 5.9E-05 33.2 5.9 80 41-133 5-102 (255)
465 1sby_A Alcohol dehydrogenase; 84.9 3 0.0001 32.0 7.1 87 41-139 3-101 (254)
466 1w6u_A 2,4-dienoyl-COA reducta 84.8 1.8 6.1E-05 34.1 6.0 83 38-132 21-114 (302)
467 1eg2_A Modification methylase 84.8 0.69 2.4E-05 37.7 3.5 43 120-162 56-109 (319)
468 2eez_A Alanine dehydrogenase; 84.7 0.95 3.2E-05 37.4 4.4 40 40-79 163-205 (369)
469 3ado_A Lambda-crystallin; L-gu 84.7 1.4 4.8E-05 35.9 5.3 43 43-85 6-51 (319)
470 3afn_B Carbonyl reductase; alp 84.6 1.2 4.1E-05 34.0 4.7 79 41-132 5-95 (258)
471 3pvc_A TRNA 5-methylaminomethy 84.5 1.7 5.7E-05 39.0 6.2 59 120-184 169-231 (689)
472 1y1p_A ARII, aldehyde reductas 84.5 11 0.00039 29.6 10.7 82 38-132 6-93 (342)
473 1yxm_A Pecra, peroxisomal tran 84.4 2.1 7.1E-05 33.8 6.2 88 37-132 12-110 (303)
474 3a28_C L-2.3-butanediol dehydr 84.4 2.7 9.1E-05 32.4 6.7 78 43-133 2-92 (258)
475 4iiu_A 3-oxoacyl-[acyl-carrier 84.3 2.5 8.6E-05 32.7 6.5 80 41-133 24-115 (267)
476 1lu9_A Methylene tetrahydromet 84.2 3.1 0.0001 32.9 7.1 79 40-132 116-198 (287)
477 2pnf_A 3-oxoacyl-[acyl-carrier 84.1 2.4 8.4E-05 32.1 6.3 80 41-132 5-95 (248)
478 3ctm_A Carbonyl reductase; alc 84.1 3.8 0.00013 31.8 7.5 81 40-133 31-122 (279)
479 3dmg_A Probable ribosomal RNA 84.0 2.8 9.7E-05 34.8 7.0 108 42-175 45-153 (381)
480 3n74_A 3-ketoacyl-(acyl-carrie 84.0 2.1 7.3E-05 32.9 5.9 79 39-133 5-94 (261)
481 1qsg_A Enoyl-[acyl-carrier-pro 83.9 2.7 9.2E-05 32.5 6.5 80 41-133 7-98 (265)
482 2qhx_A Pteridine reductase 1; 83.8 2.7 9.1E-05 34.0 6.7 61 41-114 44-110 (328)
483 4dyv_A Short-chain dehydrogena 83.8 1.5 5.1E-05 34.4 5.0 79 38-132 23-112 (272)
484 2bgk_A Rhizome secoisolaricire 83.7 1.6 5.6E-05 33.8 5.2 80 39-132 12-102 (278)
485 1gee_A Glucose 1-dehydrogenase 83.6 1.7 6E-05 33.3 5.3 79 41-132 5-95 (261)
486 2j8z_A Quinone oxidoreductase; 83.4 0.31 1E-05 40.0 0.8 92 41-159 161-261 (354)
487 3osu_A 3-oxoacyl-[acyl-carrier 83.4 2.2 7.4E-05 32.7 5.7 79 42-133 3-93 (246)
488 1mxh_A Pteridine reductase 2; 83.3 2.6 8.7E-05 32.8 6.2 80 41-132 9-104 (276)
489 1pjc_A Protein (L-alanine dehy 83.2 1.5 5.2E-05 36.1 5.0 41 41-81 165-208 (361)
490 3tzq_B Short-chain type dehydr 82.9 1.5 5.3E-05 34.2 4.7 78 40-133 8-96 (271)
491 3sc4_A Short chain dehydrogena 82.9 2 6.7E-05 33.9 5.4 81 40-133 6-104 (285)
492 4ft4_B DNA (cytosine-5)-methyl 82.9 1.1 3.8E-05 40.8 4.4 39 44-82 213-259 (784)
493 1spx_A Short-chain reductase f 82.8 1.7 5.8E-05 33.9 5.0 82 41-132 4-96 (278)
494 3two_A Mannitol dehydrogenase; 82.8 1.2 4.1E-05 36.2 4.2 88 40-158 174-264 (348)
495 3rku_A Oxidoreductase YMR226C; 82.7 4.9 0.00017 31.7 7.7 82 40-132 30-125 (287)
496 3grp_A 3-oxoacyl-(acyl carrier 82.6 2.4 8.3E-05 33.0 5.8 79 39-133 23-112 (266)
497 3tnl_A Shikimate dehydrogenase 82.6 2.7 9.2E-05 34.1 6.2 35 39-73 150-187 (315)
498 2nwq_A Probable short-chain de 82.6 4.2 0.00014 31.8 7.2 79 39-132 18-107 (272)
499 2zb4_A Prostaglandin reductase 82.4 0.97 3.3E-05 36.9 3.5 91 42-158 158-259 (357)
500 1x1t_A D(-)-3-hydroxybutyrate 82.3 2.1 7E-05 33.1 5.2 79 41-132 2-93 (260)
No 1
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.77 E-value=1.3e-18 Score=141.95 Aligned_cols=154 Identities=19% Similarity=0.282 Sum_probs=104.5
Q ss_pred CCCCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeec-hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 38 PSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~-~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
....++++|||||||+|.+++.+++.|+ +|+++|+ +. +++.+++|+..|........ .....++++..++|++..
T Consensus 75 ~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~--~~~~~~v~~~~~~~~~~~ 152 (281)
T 3bzb_A 75 PELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSE--TVKRASPKVVPYRWGDSP 152 (281)
T ss_dssp GGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC------------CCCEEEECCTTSCT
T ss_pred chhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccc--cCCCCCeEEEEecCCCcc
Confidence 3345788999999999999999999988 7999999 55 99999999954421000000 000136888888998643
Q ss_pred cccc---cCCCccEEEEeccccCCcChHHHHHHHHHhcC---C--CcEEEEEEEecChh---HHHHHHHHHH-hC-CeEE
Q 029065 115 HIKA---VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSG---P--KTTILLGYEIRSTS---VHEQMLQMWK-SN-FNVK 181 (199)
Q Consensus 115 ~~~~---~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~---~--~g~i~i~~~~~~~~---~~~~~~~~~~-~~-~~v~ 181 (199)
.... ..++||+|++++++|+...+..+++.+.++|+ | ||.+++....+... ....|++.+. .+ |+++
T Consensus 153 ~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~ 232 (281)
T 3bzb_A 153 DSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAE 232 (281)
T ss_dssp HHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEE
T ss_pred HHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEE
Confidence 2111 25689999999999999999999999999999 9 99988876654321 1245656554 57 9998
Q ss_pred EecCC-CcCcccC
Q 029065 182 LVPKA-KESTMWG 193 (199)
Q Consensus 182 ~~~~~-~~~~~~~ 193 (199)
.+... .....|.
T Consensus 233 ~~~~~~~~~~~f~ 245 (281)
T 3bzb_A 233 PWLSPLQMDPMFP 245 (281)
T ss_dssp EEECCC-------
T ss_pred Eeccccccccccc
Confidence 77433 2333443
No 2
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=3.3e-16 Score=123.14 Aligned_cols=127 Identities=23% Similarity=0.333 Sum_probs=96.6
Q ss_pred CCCcEEEeCCC-cChHHHHHHhh-CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAG-CGVAGFGMALL-GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG-~G~~sl~la~~-g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+||| +|..++.+++. +.+|+++|++ .+++.|++|+..++. ++++...|+......
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------------~v~~~~~d~~~~~~~-- 119 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-------------NVRLVKSNGGIIKGV-- 119 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-------------CCEEEECSSCSSTTT--
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-------------CcEEEeCCchhhhhc--
Confidence 57899999999 99999999988 8899999995 499999999988852 678888886433222
Q ss_pred cCCCccEEEEeccccCCcC-------------------hHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCC
Q 029065 119 VAPPFDYIIGTDVVYAEHL-------------------LEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNF 178 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~-------------------~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~ 178 (199)
..++||+|+++++++.... +..+++.+.++|+|||.+++..+.+.. ....+.+.+ ..+|
T Consensus 120 ~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 120 VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEK-LLNVIKERGIKLGY 198 (230)
T ss_dssp CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHH-HHHHHHHHHHHTTC
T ss_pred ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHh-HHHHHHHHHHHcCC
Confidence 2478999999988765332 478999999999999999998775532 234455555 3478
Q ss_pred eEEEec
Q 029065 179 NVKLVP 184 (199)
Q Consensus 179 ~v~~~~ 184 (199)
.++.+.
T Consensus 199 ~~~~~~ 204 (230)
T 3evz_A 199 SVKDIK 204 (230)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 877654
No 3
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=135.30 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=89.1
Q ss_pred cCCCCCCCCcEEEeCCCcChHHHHHHhhCCe-EEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 36 FCPSKLKGKRVIELGAGCGVAGFGMALLGCN-VITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 36 ~~~~~~~~~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.|...++|++|||||||+|++++++|+.|++ |+++|.+++++.|++++..|++ ..+|++.+.+..+.+
T Consensus 77 ~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~-----------~~~i~~i~~~~~~~~ 145 (376)
T 4hc4_A 77 RNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGL-----------EDRVHVLPGPVETVE 145 (376)
T ss_dssp TTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC
T ss_pred hCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCC-----------CceEEEEeeeeeeec
Confidence 3667789999999999999999999999986 9999998888999999999975 457999988776543
Q ss_pred cccccCCCccEEEEe---ccccCCcChHHHHHHHHHhcCCCcEEE
Q 029065 115 HIKAVAPPFDYIIGT---DVVYAEHLLEPLLQTIFALSGPKTTIL 156 (199)
Q Consensus 115 ~~~~~~~~fD~Ii~~---~~~~~~~~~~~~l~~l~~~l~~~g~i~ 156 (199)
..++||+||+. ..+.+...+..++....++|+|||.++
T Consensus 146 ----lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 ----LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ----CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ----CCccccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 23689999984 445567789999999999999998754
No 4
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.67 E-value=5.8e-16 Score=124.42 Aligned_cols=151 Identities=14% Similarity=0.175 Sum_probs=105.9
Q ss_pred ecCcceeeccccccccCc--------cCCCCCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhh
Q 029065 18 VLGHQLQFSQEKNCRKGR--------FCPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNT 87 (199)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~ 87 (199)
.....+.+.|......+. +.+..+++.+|||+|||+|.+++.++..+. +|+++|++ .+++.|++|+..++
T Consensus 17 ~~~~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~ 96 (259)
T 3lpm_A 17 LLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQ 96 (259)
T ss_dssp ETTTTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTT
T ss_pred ccCCCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCC
Confidence 456677777765432221 122112578999999999999999998876 79999995 59999999999886
Q ss_pred hccccCCCCCCCCCcEEEEEeeeCCCccccccCCCccEEEEeccccCC--------------------cChHHHHHHHHH
Q 029065 88 SRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE--------------------HLLEPLLQTIFA 147 (199)
Q Consensus 88 ~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~--------------------~~~~~~l~~l~~ 147 (199)
. ..++++.+.|+.+.... ...++||+|+++++++.. ..+..+++.+.+
T Consensus 97 ~-----------~~~v~~~~~D~~~~~~~-~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~ 164 (259)
T 3lpm_A 97 L-----------EDQIEIIEYDLKKITDL-IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAAS 164 (259)
T ss_dssp C-----------TTTEEEECSCGGGGGGT-SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHH
T ss_pred C-----------cccEEEEECcHHHhhhh-hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHH
Confidence 4 34689998887644311 225789999999988665 235679999999
Q ss_pred hcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEe
Q 029065 148 LSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLV 183 (199)
Q Consensus 148 ~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~ 183 (199)
+|+|||.+++..+.... ..+...+. .+|.+..+
T Consensus 165 ~LkpgG~l~~~~~~~~~---~~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 165 LLKQGGKANFVHRPERL---LDIIDIMRKYRLEPKRI 198 (259)
T ss_dssp HEEEEEEEEEEECTTTH---HHHHHHHHHTTEEEEEE
T ss_pred HccCCcEEEEEEcHHHH---HHHHHHHHHCCCceEEE
Confidence 99999999997654333 34444443 35665443
No 5
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.66 E-value=8.4e-16 Score=116.92 Aligned_cols=107 Identities=16% Similarity=0.020 Sum_probs=80.9
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..++.+++.+.+|+++|+++ +++.|++++..++ ..++++...+...... ..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~------------~~~v~~~~~~~~~l~~--~~ 86 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLG------------IENTELILDGHENLDH--YV 86 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHT------------CCCEEEEESCGGGGGG--TC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcC------------CCcEEEEeCcHHHHHh--hc
Confidence 3578999999999999999999888999999955 9999999998875 2467877755432211 22
Q ss_pred CCCccEEEEeccccCC---------cChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~---------~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.++||+|+++..+... .....+++.+.++|+|||.+++....
T Consensus 87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 5689999988433322 34567789999999999999887653
No 6
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.66 E-value=2.6e-16 Score=122.27 Aligned_cols=145 Identities=15% Similarity=-0.021 Sum_probs=95.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..+++.|.+|+++|+++ |++.|+++..........-+.......++++.+.|..+.. ...
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~---~~~ 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT---ARD 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST---HHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC---ccc
Confidence 578999999999999999999999999999965 9999987653210000000000000236788888876442 222
Q ss_pred -CCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEecC------h---hHHHHHHHHHHhCCeEEEecCCCc
Q 029065 121 -PPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIRS------T---SVHEQMLQMWKSNFNVKLVPKAKE 188 (199)
Q Consensus 121 -~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~------~---~~~~~~~~~~~~~~~v~~~~~~~~ 188 (199)
++||+|++..++++.. ....+++.+.++|+|||.+++...... + -..+.+.+.+..+|++..+.....
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~gf~i~~~~~~~~ 178 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSGNWEVTKVGGQDT 178 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCSSEEEEEEEESSC
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcCCcEEEEeccccc
Confidence 6899999988887643 456789999999999998544432211 0 013444455545888877665554
Q ss_pred C
Q 029065 189 S 189 (199)
Q Consensus 189 ~ 189 (199)
.
T Consensus 179 ~ 179 (203)
T 1pjz_A 179 L 179 (203)
T ss_dssp T
T ss_pred h
Confidence 3
No 7
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.66 E-value=6.8e-16 Score=118.11 Aligned_cols=110 Identities=16% Similarity=0.202 Sum_probs=89.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++++|||+|||+|..++.++..++ +|+++|++ ++++.|++|+..++ ..++++.+.|+.+... ..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------------~~~v~~~~~d~~~~~~-~~ 109 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALG------------LSGATLRRGAVAAVVA-AG 109 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHT------------CSCEEEEESCHHHHHH-HC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcC------------CCceEEEEccHHHHHh-hc
Confidence 4788999999999999998887776 59999995 59999999998886 2478888888753321 11
Q ss_pred cCCCccEEEEeccccCC-cChHHHHHHHHH--hcCCCcEEEEEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAE-HLLEPLLQTIFA--LSGPKTTILLGYEIRS 163 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~-~~~~~~l~~l~~--~l~~~g~i~i~~~~~~ 163 (199)
..++||+|++++++++. .....++..+.+ +|+|||.+++....+.
T Consensus 110 ~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 110 TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 25789999999886654 788999999999 9999999999887654
No 8
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.66 E-value=4.8e-16 Score=125.56 Aligned_cols=107 Identities=16% Similarity=0.236 Sum_probs=87.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh----CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL----GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~----g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
-+|.+|||||||+|..++.+++. |++|+|+|+++ |++.|++++...+. ..++++.+.|..+..
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----------~~~v~~~~~D~~~~~- 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----------PTPVDVIEGDIRDIA- 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----------SSCEEEEESCTTTCC-
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----------CceEEEeeccccccc-
Confidence 36789999999999999999875 56899999955 99999999876543 347888887775432
Q ss_pred ccccCCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 116 IKAVAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
.+.||+|+++.++++.. ....+++.+.++|+|||.+++++....
T Consensus 137 ----~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 137 ----IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp ----CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred ----ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 35799999999887754 456799999999999999999987654
No 9
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.65 E-value=2.1e-15 Score=115.38 Aligned_cols=104 Identities=19% Similarity=0.253 Sum_probs=87.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..|.+|+++|+++ +++.+++++..++ ..++++...|+.... .
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~------------~~~~~~~~~d~~~~~---~- 94 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIEN------------LDNLHTRVVDLNNLT---F- 94 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------------CTTEEEEECCGGGCC---C-
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCC------------CCCcEEEEcchhhCC---C-
Confidence 3567999999999999999999899999999954 9999999887765 236788887775432 2
Q ss_pred CCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 APPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
.+.||+|+++.++++.. ....+++.+.++|+|||.+++...
T Consensus 95 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 57899999999998865 889999999999999999877654
No 10
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.65 E-value=1.4e-15 Score=121.71 Aligned_cols=106 Identities=14% Similarity=0.106 Sum_probs=90.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||+|..+..++..+.+|+++|+++ +++.+++++...+ ..++.+...|.... +..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~------------~~~v~~~~~d~~~l---~~~~ 101 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNG------------HQQVEYVQGDAEQM---PFTD 101 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT------------CCSEEEEECCC-CC---CSCT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcC------------CCceEEEEecHHhC---CCCC
Confidence 578999999999999999999988999999954 9999999887765 23688888777543 2345
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
+.||+|+++.++++..+...++..+.++|+|||.+++.....
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 789999999999999999999999999999999999986543
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=1e-15 Score=121.90 Aligned_cols=106 Identities=17% Similarity=0.104 Sum_probs=90.7
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||||||+|..+..++.. +.+|+++|+++ +++.+++++...+. ..++++...|+.+.. .
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~---~ 100 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV-----------SERVHFIHNDAAGYV---A 100 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCCTTCC---C
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC-----------CcceEEEECChHhCC---c
Confidence 35789999999999999999876 77899999954 99999999887753 247899888876432 2
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.+.||+|++..++++..+...+++.+.++|+|||.+++..+.
T Consensus 101 -~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 101 -NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp -SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred -CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 578999999999999889999999999999999999998764
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.65 E-value=3.2e-15 Score=118.48 Aligned_cols=107 Identities=12% Similarity=0.094 Sum_probs=91.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
-++.+|||+|||+|..+..++..+.+|+++|+++ +++.+++++..++ ..++.+...|+... +..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~------------~~~v~~~~~d~~~~---~~~ 84 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKG------------VENVRFQQGTAESL---PFP 84 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT------------CCSEEEEECBTTBC---CSC
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcC------------CCCeEEEecccccC---CCC
Confidence 3578999999999999999999999999999954 9999999987775 23688888777532 334
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.+.||+|+++.++++..++..++..+.++|+|||.+++.....
T Consensus 85 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 5789999999999999999999999999999999999987653
No 13
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.65 E-value=2.4e-15 Score=119.84 Aligned_cols=102 Identities=14% Similarity=0.181 Sum_probs=86.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++++|||||||+|..+..++..|. +|+++|++ .+++.++++.. ..++++...|+... +.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---------------~~~~~~~~~d~~~~---~~ 104 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---------------SPVVCYEQKAIEDI---AI 104 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---------------CTTEEEEECCGGGC---CC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---------------cCCeEEEEcchhhC---CC
Confidence 4688999999999999999999988 79999995 49998887754 12678888777533 23
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..++||+|+++.++++..+...+++.+.++|+|||.++++.+
T Consensus 105 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 357899999999999999999999999999999999999754
No 14
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.64 E-value=1.4e-15 Score=123.31 Aligned_cols=108 Identities=21% Similarity=0.230 Sum_probs=91.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||+|..+..++..|.+|+++|++ .+++.+++++...+. ..++++...|+..... ...
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~--~~~ 134 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGV-----------SDNMQFIHCAAQDVAS--HLE 134 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CC-----------GGGEEEEESCGGGTGG--GCS
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CcceEEEEcCHHHhhh--hcC
Confidence 46799999999999999999999999999995 499999999877653 2478888888764431 335
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
++||+|+++.++++..+...+++.+.++|+|||.+++.....
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 789999999999999999999999999999999999988643
No 15
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.64 E-value=2.8e-15 Score=116.10 Aligned_cols=105 Identities=16% Similarity=0.156 Sum_probs=89.3
Q ss_pred CcEEEeCCCcChHHHHHHhh-CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 44 KRVIELGAGCGVAGFGMALL-GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
.+|||+|||+|..+..++.. +.+|+++|++ .+++.+++++...+. ..++++...|+.+. +...+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~---~~~~~ 110 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL-----------NDRIQIVQGDVHNI---PIEDN 110 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECBTTBC---SSCTT
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc-----------cCceEEEEcCHHHC---CCCcc
Confidence 39999999999999999987 6689999995 599999999887753 34788888887543 23457
Q ss_pred CccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 122 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 122 ~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.||+|+++.++++..+...+++.+.++|+|||.+++.....
T Consensus 111 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 111 YADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred cccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 89999999999999999999999999999999999986543
No 16
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.63 E-value=4.3e-15 Score=115.69 Aligned_cols=127 Identities=12% Similarity=0.062 Sum_probs=99.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC---CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG---CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g---~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|..+..++..+ .+|+++|++ .+++.+++++..++. .++++...|+... .
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~~~~~~~d~~~~---~ 101 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------------KNVEVLKSEENKI---P 101 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------------TTEEEEECBTTBC---S
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------------CcEEEEecccccC---C
Confidence 57899999999999999999876 689999995 599999999887752 3688888887543 2
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChh----------HHHHHHHHHH-hCCeEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTS----------VHEQMLQMWK-SNFNVKLV 183 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~----------~~~~~~~~~~-~~~~v~~~ 183 (199)
...+.||+|+++.++++..+...+++.+.++|+|||.+++........ ..+.+.+.+. .+|++..+
T Consensus 102 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 102 LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 335789999999999999999999999999999999999987543210 1344555553 47876544
No 17
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.63 E-value=5.2e-15 Score=121.84 Aligned_cols=107 Identities=7% Similarity=-0.109 Sum_probs=91.2
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||+|||+|..+..++.. +++|+++|++ .+++.|++++..++. ..++++...|+.+. +.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~---~~ 181 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI-----------DDHVRSRVCNMLDT---PF 181 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC---CC
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----------CCceEEEECChhcC---CC
Confidence 45789999999999999999987 8999999995 599999999988764 34789988887643 23
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||+|+++.++++. +...+++.+.++|+|||.+++.....
T Consensus 182 ~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp CTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 35789999999999888 49999999999999999999888654
No 18
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.63 E-value=4.4e-15 Score=114.40 Aligned_cols=124 Identities=11% Similarity=0.076 Sum_probs=96.1
Q ss_pred CCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 43 GKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
+.+|||+|||+|..+..++..|.+|+++|++. +++.++++. .++.+...|+.+. +...+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~---~~~~~ 101 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH-----------------PSVTFHHGTITDL---SDSPK 101 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC-----------------TTSEEECCCGGGG---GGSCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-----------------CCCeEEeCccccc---ccCCC
Confidence 78999999999999999999999999999954 888888761 2567777776532 33457
Q ss_pred CccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEecCh-------------hHHHHHHHHHH-hCCeEEEecC
Q 029065 122 PFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIRST-------------SVHEQMLQMWK-SNFNVKLVPK 185 (199)
Q Consensus 122 ~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~~-------------~~~~~~~~~~~-~~~~v~~~~~ 185 (199)
.||+|++..++++.. +...+++.+.++|+|||.+++....... ...+.+.+.+. .||++..+..
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 899999999998864 8999999999999999999998865431 11344555553 5788866554
Q ss_pred C
Q 029065 186 A 186 (199)
Q Consensus 186 ~ 186 (199)
.
T Consensus 182 ~ 182 (203)
T 3h2b_A 182 D 182 (203)
T ss_dssp C
T ss_pred c
Confidence 3
No 19
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.63 E-value=3.5e-15 Score=118.93 Aligned_cols=107 Identities=11% Similarity=0.089 Sum_probs=90.5
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
..++.+|||||||+|..+..++..+. +|+++|+++ +++.+++++..++. ..++++...|+... +
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~---~ 109 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC-----------ADRVKGITGSMDNL---P 109 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC---S
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC-----------CCceEEEECChhhC---C
Confidence 34577999999999999999998865 899999954 99999999888764 33589988887543 2
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...++||+|+++.++++. +...+++.+.++|+|||.+++..+.
T Consensus 110 ~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 110 FQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp SCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 335789999999999888 7899999999999999999999864
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.63 E-value=4e-15 Score=121.28 Aligned_cols=109 Identities=12% Similarity=0.066 Sum_probs=92.4
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
..++.+|||+|||+|..+..++.. +++|+++|+++ +++.+++++...+. ..++++...|+... +
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~---~ 145 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL-----------ADNITVKYGSFLEI---P 145 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC-----------TTTEEEEECCTTSC---S
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-----------CcceEEEEcCcccC---C
Confidence 346789999999999999999976 88999999955 99999998877653 34688888887543 3
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
...+.||+|++..++++..+...+++.+.++|+|||.+++..+..
T Consensus 146 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 146 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 345789999999999998899999999999999999999998753
No 21
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.62 E-value=2.3e-15 Score=119.49 Aligned_cols=127 Identities=12% Similarity=0.086 Sum_probs=93.6
Q ss_pred CCCcEEEeCCCcChHHHHHHh--hCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMAL--LGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~--~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|..++.++. .+.+|+++|+++ +++.+++++..++. .++++.+.|+.+......
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~~~~~ 137 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL------------ENTTFCHDRAETFGQRKD 137 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------------SSEEEEESCHHHHTTCTT
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCEEEEeccHHHhccccc
Confidence 578999999999999999994 467899999955 99999999988763 368888877643221011
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEec
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLVP 184 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 184 (199)
..++||+|++... ..+..+++.+.++|+|||.+++.......+....+.+.+. .+|.+..+.
T Consensus 138 ~~~~fD~V~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 138 VRESYDIVTARAV----ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp TTTCEEEEEEECC----SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCccEEEEecc----CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEE
Confidence 1468999999763 6789999999999999999988754444443444555543 467665543
No 22
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.62 E-value=7.4e-15 Score=111.51 Aligned_cols=109 Identities=20% Similarity=0.239 Sum_probs=89.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..+.+|+++|++ .+++.+++++..++.. ..++++...|+.... ..
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----------~~~~~~~~~d~~~~~----~~ 117 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLD----------NYDIRVVHSDLYENV----KD 117 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCT----------TSCEEEEECSTTTTC----TT
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCC----------ccceEEEECchhccc----cc
Confidence 67899999999999999999888899999995 5999999998877531 013888888876432 25
Q ss_pred CCccEEEEeccccC-CcChHHHHHHHHHhcCCCcEEEEEEEecCh
Q 029065 121 PPFDYIIGTDVVYA-EHLLEPLLQTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~-~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
+.||+|+++.++++ ......+++.+.++|+|||.+++.......
T Consensus 118 ~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 118 RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred CCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 68999999988766 467889999999999999999999887543
No 23
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.62 E-value=1.8e-14 Score=111.26 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=92.2
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhC--CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLG--CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.++.+|||+|||+|..++.+++.+ .+|+++|++ ++++.+++++..++ ..++++...|+.+..
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------------~~~v~~~~~d~~~~~--- 103 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV------------ARNVTLVEAFAPEGL--- 103 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT------------CTTEEEEECCTTTTC---
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC------------CCcEEEEeCChhhhh---
Confidence 357899999999999999999887 679999995 59999999998876 347888887764332
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeE
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNV 180 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v 180 (199)
...+.||+|+++.++. ....+++.+.++|+|||.+++....... .+.+.+.+. .+|.+
T Consensus 104 ~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 104 DDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLDT--LTKAVEFLEDHGYMV 162 (204)
T ss_dssp TTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHHH--HHHHHHHHHHTTCEE
T ss_pred hcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccccc--HHHHHHHHHHCCCce
Confidence 1236799999987664 7889999999999999999997665322 344444443 45543
No 24
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.62 E-value=3.4e-15 Score=117.74 Aligned_cols=131 Identities=16% Similarity=0.070 Sum_probs=100.1
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
+++.+|||+|||+|..+..++..+.+|+++|+++ +++.+++++...+. ..++++...|+.... .
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~----~ 129 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPK-----------AEYFSFVKEDVFTWR----P 129 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGG-----------GGGEEEECCCTTTCC----C
T ss_pred CCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCC-----------CcceEEEECchhcCC----C
Confidence 3456999999999999999999899999999955 99999998765432 346888888876532 2
Q ss_pred CCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEecCh--------hHHHHHHHHHH-hCCeEEEecCC
Q 029065 120 APPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIRST--------SVHEQMLQMWK-SNFNVKLVPKA 186 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~~--------~~~~~~~~~~~-~~~~v~~~~~~ 186 (199)
.++||+|+++.++++.. ....+++.+.++|+|||.+++....... .....+.+.+. .+|++..+...
T Consensus 130 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 130 TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 45899999999998866 8999999999999999998886643211 01345555554 47888665543
No 25
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.62 E-value=2.1e-15 Score=120.93 Aligned_cols=128 Identities=13% Similarity=0.090 Sum_probs=94.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|.+++.++.. +.+|+++|+++ +++.+++|+..++. .++++.+.|+.+......
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l------------~~v~~~~~d~~~~~~~~~ 147 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL------------KGARALWGRAEVLAREAG 147 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------------SSEEEEECCHHHHTTSTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC------------CceEEEECcHHHhhcccc
Confidence 5789999999999999999976 56899999955 99999999988863 368888887753321111
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLVPK 185 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 185 (199)
..++||+|++..+ ..+..+++.+.++|+|||.+++.......+....+...+. .+|.+..+..
T Consensus 148 ~~~~fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 148 HREAYARAVARAV----APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp TTTCEEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEE
T ss_pred cCCCceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEE
Confidence 2468999999753 5778999999999999999887664443333334444432 3666655443
No 26
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.62 E-value=1.2e-15 Score=118.73 Aligned_cols=102 Identities=15% Similarity=0.153 Sum_probs=86.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..+.+|+++|+++ +++.+++++... .++++...|+.+.. ..
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~~~~~~~d~~~~~----~~ 112 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW--------------SHISWAATDILQFS----TA 112 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC--------------SSEEEEECCTTTCC----CS
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC--------------CCeEEEEcchhhCC----CC
Confidence 567999999999999999999998999999954 999998876443 26888888876543 35
Q ss_pred CCccEEEEeccccCCcCh---HHHHHHHHHhcCCCcEEEEEEEe
Q 029065 121 PPFDYIIGTDVVYAEHLL---EPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~---~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
++||+|+++.++++..+. ..+++.+.++|+|||.++++.+.
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 789999999999987766 56799999999999999998754
No 27
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.62 E-value=6.4e-15 Score=120.61 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=89.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
-++.+|||||||+|..+..+++. |++|+++|+++ +++.+++++..++. ..++++...|+.+.
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~----- 134 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS-----------PRRKEVRIQGWEEF----- 134 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC-----------SSCEEEEECCGGGC-----
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEECCHHHc-----
Confidence 35779999999999999999987 88999999954 99999999887753 34788888887532
Q ss_pred cCCCccEEEEeccccCCc---------ChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAEH---------LLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~---------~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
.+.||+|+++.++.+.. ....+++.+.++|+|||.+++......
T Consensus 135 -~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred -CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 57899999999998874 448999999999999999999887543
No 28
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.62 E-value=3.4e-15 Score=120.02 Aligned_cols=107 Identities=12% Similarity=0.069 Sum_probs=90.9
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
..++.+|||||||+|..+..++..+. +|+++|+++ +++.+++++...+. ..++++...|+.+..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--- 109 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL-----------QNRVTGIVGSMDDLP--- 109 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC-----------CcCcEEEEcChhhCC---
Confidence 34678999999999999999998855 899999954 99999999887753 346899998885432
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...++||+|+++.++++. ++..+++.+.++|+|||.+++....
T Consensus 110 ~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp CCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 335789999999999888 8999999999999999999998865
No 29
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=5.7e-15 Score=118.80 Aligned_cols=108 Identities=13% Similarity=0.083 Sum_probs=91.1
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||||||+|..+..+++. +.+|+++|+++ +++.+++++...+. ..++.+...|+... +.
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~---~~ 125 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL-----------ANRVTFSYADAMDL---PF 125 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC---CS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC-----------CcceEEEECccccC---CC
Confidence 35789999999999999999874 78899999955 99999998877653 34688888877543 23
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..++||+|++..++++..+...+++.+.++|+|||.+++.....
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 35789999999999999999999999999999999999988653
No 30
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.61 E-value=6.2e-15 Score=118.44 Aligned_cols=140 Identities=13% Similarity=0.048 Sum_probs=93.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCC------CCCCcEEEEEeeeCCCc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGS------DLLGSIQAVELDWGNED 114 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~d~~~~~ 114 (199)
++.+|||+|||+|..+..+|..|.+|+|+|+++ +++.|+++......... ....+ ....++++.+.|+.+..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEP-LAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEE-CTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhccccccccc-ccccccccccccCCCceEEEECccccCC
Confidence 578999999999999999999999999999965 99988765421000000 00000 01246888888875432
Q ss_pred ccccc-CCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEe-cC-----h---hHHHHHHHHHHhCCeEEE
Q 029065 115 HIKAV-APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEI-RS-----T---SVHEQMLQMWKSNFNVKL 182 (199)
Q Consensus 115 ~~~~~-~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~-~~-----~---~~~~~~~~~~~~~~~v~~ 182 (199)
.. .++||+|++..++++. .....+++.+.++|+|||.+++.... .. + ...+.+.+.+...|++..
T Consensus 147 ---~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~~f~v~~ 223 (252)
T 2gb4_A 147 ---RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGTKCSMQC 223 (252)
T ss_dssp ---GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTTTEEEEE
T ss_pred ---cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhCCeEEEE
Confidence 22 2789999998887663 45678999999999999998654322 10 0 113455555655688866
Q ss_pred ecC
Q 029065 183 VPK 185 (199)
Q Consensus 183 ~~~ 185 (199)
+..
T Consensus 224 ~~~ 226 (252)
T 2gb4_A 224 LEE 226 (252)
T ss_dssp EEE
T ss_pred Eec
Confidence 553
No 31
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.61 E-value=6.3e-15 Score=114.31 Aligned_cols=122 Identities=16% Similarity=0.225 Sum_probs=93.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..|.+|+++|+++ +++.+++++ + +.+...|+... . ..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~----------------~~~~~~d~~~~---~-~~ 100 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL--G----------------RPVRTMLFHQL---D-AI 100 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--T----------------SCCEECCGGGC---C-CC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc--C----------------CceEEeeeccC---C-CC
Confidence 578999999999999999999999999999954 999998876 1 23344555432 2 46
Q ss_pred CCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEecChh------------HHHHHHHHHH-hC-CeEEEec
Q 029065 121 PPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIRSTS------------VHEQMLQMWK-SN-FNVKLVP 184 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~~~------------~~~~~~~~~~-~~-~~v~~~~ 184 (199)
+.||+|+++.++++.. +...+++.+.++|+|||.++++.+..... ..+.+.+.+. .| |++..+.
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 7899999999998876 88899999999999999999987654311 1344555553 58 8876654
Q ss_pred C
Q 029065 185 K 185 (199)
Q Consensus 185 ~ 185 (199)
.
T Consensus 181 ~ 181 (211)
T 3e23_A 181 S 181 (211)
T ss_dssp E
T ss_pred e
Confidence 4
No 32
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.61 E-value=3.4e-14 Score=110.42 Aligned_cols=125 Identities=15% Similarity=0.161 Sum_probs=93.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|.+++.+++.+.+|+++|++ ++++.|++++..++. ..++++...|..+. . ..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----------~~~v~~~~~d~~~~--~-~~ 119 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGL-----------SPRMRAVQGTAPAA--L-AD 119 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCTTGG--G-TT
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----------CCCEEEEeCchhhh--c-cc
Confidence 357899999999999999999988899999995 599999999988763 22688888776532 1 12
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEecCC
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLVPKA 186 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 186 (199)
.+.||+|++...+ ... +++.+.++|+|||.+++....... ...+.+.+. .++++..+...
T Consensus 120 ~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~l~~~g~~i~~i~~~ 180 (204)
T 3njr_A 120 LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLES--ETLLTQLHARHGGQLLRIDIA 180 (204)
T ss_dssp SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHHH--HHHHHHHHHHHCSEEEEEEEE
T ss_pred CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCccc--HHHHHHHHHhCCCcEEEEEee
Confidence 3579999987643 455 999999999999999887764322 344444443 35777665543
No 33
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.61 E-value=3.4e-14 Score=110.72 Aligned_cols=108 Identities=18% Similarity=0.118 Sum_probs=83.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|..+..++..+ .+|+++|+++ +++.+++++..++... ....++++...|+... ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-------~~~~~v~~~~~d~~~~---~~ 98 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPE-------MQRKRISLFQSSLVYR---DK 98 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCH-------HHHTTEEEEECCSSSC---CG
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-------ccCcceEEEeCccccc---cc
Confidence 56899999999999999999876 5799999955 9999999887654210 0012688888777432 23
Q ss_pred cCCCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEE
Q 029065 119 VAPPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
..++||+|+++.++++... ...+++.+.++|+|||.+++..
T Consensus 99 ~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 99 RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 3578999999999998774 4799999999999999655443
No 34
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.60 E-value=4.3e-15 Score=117.15 Aligned_cols=102 Identities=14% Similarity=0.096 Sum_probs=86.3
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||||||+|..+..++..+.+|+++|+++ +++.|+++... ++++...|..+. ..
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~----------------~v~~~~~d~~~~----~~ 100 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD----------------GITYIHSRFEDA----QL 100 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS----------------CEEEEESCGGGC----CC
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC----------------CeEEEEccHHHc----Cc
Confidence 4677999999999999999999999999999955 88888776321 467777776533 23
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHH-HhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIF-ALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~-~~l~~~g~i~i~~~~~ 162 (199)
+++||+|++..++++..+...+++.+. ++|+|||.+++..+..
T Consensus 101 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 101 PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 578999999999999999999999999 9999999999998764
No 35
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.60 E-value=6.8e-15 Score=118.75 Aligned_cols=105 Identities=15% Similarity=0.120 Sum_probs=81.9
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc--cc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH--IK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~ 117 (199)
.++.+|||||||+|.+++.+++.|++|+++|+++ |++.|++++..+ ....++.+... ..
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~------------------~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR------------------CVTIDLLDITAEIPK 105 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS------------------CCEEEECCTTSCCCG
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc------------------cceeeeeeccccccc
Confidence 4678999999999999999999999999999955 999998876432 12344443332 12
Q ss_pred ccCCCccEEEEeccccC--CcChHHHHHHHHHhcCCCcEEEEEEEecCh
Q 029065 118 AVAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~--~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
...++||+|+++.++++ ......++..+.++| |||.++++.+....
T Consensus 106 ~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~ 153 (261)
T 3iv6_A 106 ELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFY 153 (261)
T ss_dssp GGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCC
T ss_pred ccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcc
Confidence 23568999999998876 346778999999999 99999999886433
No 36
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.60 E-value=5.6e-15 Score=119.87 Aligned_cols=102 Identities=20% Similarity=0.282 Sum_probs=86.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..|.+|+++|+++ +++.+++++..++. ++++...|+.... . .
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~~---~-~ 182 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL-------------NISTALYDINAAN---I-Q 182 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------------CEEEEECCGGGCC---C-C
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC-------------ceEEEEecccccc---c-c
Confidence 678999999999999999999999999999955 99999999887752 6788887775432 1 6
Q ss_pred CCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 121 PPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
++||+|+++.++++. .....+++.+.++|+|||.+++...
T Consensus 183 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 789999999999875 5577999999999999999877664
No 37
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.60 E-value=2.5e-14 Score=111.47 Aligned_cols=109 Identities=16% Similarity=0.140 Sum_probs=83.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|..+..++..+ .+|+++|+++ +++.+++++..++... ....++++...|+... ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-------~~~~~v~~~~~d~~~~---~~ 98 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPR-------NQWERLQLIQGALTYQ---DK 98 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCH-------HHHTTEEEEECCTTSC---CG
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCc-------ccCcceEEEeCCcccc---cc
Confidence 46799999999999999999876 4799999954 9999999876554210 0012688888776422 23
Q ss_pred cCCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 119 VAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..++||+|+++.++++.. ....+++.+.++|+|||.+++...
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 99 RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 346899999999999876 448999999999999996665543
No 38
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=3.7e-15 Score=120.08 Aligned_cols=125 Identities=21% Similarity=0.225 Sum_probs=92.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeech-hHHHHHHHHHHH---hhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQI-EVLPLLKRNVEW---NTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~-~~l~~a~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
++.+|||+|||+|.+++.++..+ .+|+++|++ .+++.|++|+.. ++. .+++++.+.|+.+...
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l-----------~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF-----------SARIEVLEADVTLRAK 104 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT-----------GGGEEEEECCTTCCHH
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC-----------cceEEEEeCCHHHHhh
Confidence 56799999999999999999875 579999995 599999999877 643 2368999988875521
Q ss_pred c----cccCCCccEEEEeccccCC------------------cChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHH
Q 029065 116 I----KAVAPPFDYIIGTDVVYAE------------------HLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQM 173 (199)
Q Consensus 116 ~----~~~~~~fD~Ii~~~~~~~~------------------~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~ 173 (199)
. ....+.||+|+++++++.. ..+..+++.+.++|+|+|.+++..+... ...+...
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~ 181 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQS---VAEIIAA 181 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGG---HHHHHHH
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHH---HHHHHHH
Confidence 0 1225689999999887654 2478899999999999999998776542 3455555
Q ss_pred HHhCCeE
Q 029065 174 WKSNFNV 180 (199)
Q Consensus 174 ~~~~~~v 180 (199)
+...|..
T Consensus 182 l~~~~~~ 188 (260)
T 2ozv_A 182 CGSRFGG 188 (260)
T ss_dssp HTTTEEE
T ss_pred HHhcCCc
Confidence 5544543
No 39
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.60 E-value=9.4e-15 Score=123.97 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=88.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|.+++.+++.+++|+++|+++ +++.+++|+..++. .+++...|+.... ..
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~-------------~v~~~~~D~~~~~---~~ 295 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANAL-------------KAQALHSDVDEAL---TE 295 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTC-------------CCEEEECSTTTTS---CT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC-------------CeEEEEcchhhcc---cc
Confidence 4678999999999999999999999999999955 99999999988863 3677777765432 22
Q ss_pred CCCccEEEEeccccC-----CcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYA-----EHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~-----~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.++||+|++++++++ ......++..+.++|+|||.++++....
T Consensus 296 ~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 296 EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 468999999999877 4567889999999999999999986543
No 40
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.60 E-value=8.1e-15 Score=114.81 Aligned_cols=110 Identities=13% Similarity=0.150 Sum_probs=88.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..+.+|+++|+++ +++.+++++...+.. .....++.+...|.... ....
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-------~~~~~~~~~~~~d~~~~---~~~~ 99 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLN-------QKTGGKAEFKVENASSL---SFHD 99 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCC-------SSSSCEEEEEECCTTSC---CSCT
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCc-------cccCcceEEEEeccccc---CCCC
Confidence 578999999999999999999999999999954 999999887655421 01123577777776533 2336
Q ss_pred CCccEEEEeccccCCcChH---HHHHHHHHhcCCCcEEEEEEEe
Q 029065 121 PPFDYIIGTDVVYAEHLLE---PLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~---~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
+.||+|+++.++++..+.. .+++.+.++|+|||.+++....
T Consensus 100 ~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 100 SSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp TCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence 7899999999999987777 8999999999999999998764
No 41
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=4.6e-15 Score=115.08 Aligned_cols=106 Identities=14% Similarity=0.135 Sum_probs=85.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|..++.++..++ +|+++|+++ +++.|++|+..++ ..++++.+.|+... ....
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~------------~~~v~~~~~D~~~~--~~~~ 119 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLK------------AGNARVVNSNAMSF--LAQK 119 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT------------CCSEEEECSCHHHH--HSSC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcC------------CCcEEEEECCHHHH--Hhhc
Confidence 678999999999999998887775 799999954 9999999998875 24688888776432 1223
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHH--hcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFA--LSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~--~l~~~g~i~i~~~~~ 162 (199)
.+.||+|+++++ |+......+++.+.+ +|+|||.+++.....
T Consensus 120 ~~~fD~V~~~~p-~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 120 GTPHNIVFVDPP-FRRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CCCEEEEEECCS-SSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCCCCEEEECCC-CCCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 468999999877 667778888988876 499999999888754
No 42
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.59 E-value=3.1e-15 Score=115.94 Aligned_cols=110 Identities=16% Similarity=0.132 Sum_probs=85.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|..++.++..++ +|+++|++ .+++.|++|+..++.. ..++++...|..+... ...
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----------~~~v~~~~~d~~~~~~-~~~ 121 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS----------SEQAEVINQSSLDFLK-QPQ 121 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC----------TTTEEEECSCHHHHTT-SCC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC----------ccceEEEECCHHHHHH-hhc
Confidence 578999999999999998777775 79999995 4999999999887630 0478888877643211 011
Q ss_pred CCC-ccEEEEeccccCCcChHHHHHHH--HHhcCCCcEEEEEEEecC
Q 029065 120 APP-FDYIIGTDVVYAEHLLEPLLQTI--FALSGPKTTILLGYEIRS 163 (199)
Q Consensus 120 ~~~-fD~Ii~~~~~~~~~~~~~~l~~l--~~~l~~~g~i~i~~~~~~ 163 (199)
.+. ||+|+++++ |+......++..+ .++|+|||.+++......
T Consensus 122 ~~~~fD~I~~~~~-~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 NQPHFDVVFLDPP-FHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SSCCEEEEEECCC-SSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred cCCCCCEEEECCC-CCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 457 999999888 5677788889888 557999999999887654
No 43
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.59 E-value=1.5e-14 Score=111.40 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=96.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++ +|||+|||+|..+..++..|.+|+++|+++ +++.++++...++. ++.+...|+... ....
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~---~~~~ 92 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV-------------KITTVQSNLADF---DIVA 92 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC-------------CEEEECCBTTTB---SCCT
T ss_pred CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC-------------ceEEEEcChhhc---CCCc
Confidence 45 999999999999999999999999999954 99999998877642 577777776543 2235
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChh--------------HHHHHHHHHHhCCeEEEecCC
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTS--------------VHEQMLQMWKSNFNVKLVPKA 186 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~--------------~~~~~~~~~~~~~~v~~~~~~ 186 (199)
+.||+|+++...+.......+++.+.++|+|||.+++........ ....+.+.+. +|++..+...
T Consensus 93 ~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-Gf~v~~~~~~ 171 (202)
T 2kw5_A 93 DAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP-SLNWLIANNL 171 (202)
T ss_dssp TTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS-SSCEEEEEEE
T ss_pred CCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc-CceEEEEEEE
Confidence 689999997543434678899999999999999999987643211 1334555555 8988766554
Q ss_pred Cc
Q 029065 187 KE 188 (199)
Q Consensus 187 ~~ 188 (199)
..
T Consensus 172 ~~ 173 (202)
T 2kw5_A 172 ER 173 (202)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 44
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.59 E-value=1.3e-14 Score=117.70 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=88.1
Q ss_pred CCCCcEEEeCCCcChHHHHHH-hhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMA-LLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la-~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||||||+|..+..++ ..|.+|+++|++ .+++.+++++...+. ..++++...|+...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~----- 126 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN-----------LRSKRVLLAGWEQF----- 126 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC-----------CSCEEEEESCGGGC-----
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCCeEEEECChhhC-----
Confidence 457899999999999999998 568899999995 499999998876542 34688888777422
Q ss_pred cCCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.++||+|++..++++. .+...+++.+.++|+|||.+++.....
T Consensus 127 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 127 -DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp -CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred -CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 1789999999999886 789999999999999999999988764
No 45
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.59 E-value=2.2e-15 Score=112.65 Aligned_cols=108 Identities=21% Similarity=0.175 Sum_probs=85.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc-ccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~ 119 (199)
++++|||+|||+|..++.++..+.+|+++|++ .+++.+++++..++ . ++++.+.|+.+.. .....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~------------~-~~~~~~~d~~~~~~~~~~~ 107 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTG------------L-GARVVALPVEVFLPEAKAQ 107 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHT------------C-CCEEECSCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcC------------C-ceEEEeccHHHHHHhhhcc
Confidence 67899999999999999999999999999995 59999999998775 2 5677777765321 11111
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHH--HhcCCCcEEEEEEEecCh
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIF--ALSGPKTTILLGYEIRST 164 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~--~~l~~~g~i~i~~~~~~~ 164 (199)
.++||+|++++++. .....+++.+. ++|+|||.+++.......
T Consensus 108 ~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 108 GERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp TCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred CCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 24799999988755 67778888888 999999999998876543
No 46
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.59 E-value=4.5e-15 Score=117.13 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=87.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||+|..+..++..|.+|+++|+++ +++.++++.. ..++++...|+... +...
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---------------~~~~~~~~~d~~~~---~~~~ 114 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGE---------------GPDLSFIKGDLSSL---PFEN 114 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTC---------------BTTEEEEECBTTBC---SSCT
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcc---------------cCCceEEEcchhcC---CCCC
Confidence 578999999999999999999999999999954 8888877631 23688888877543 2336
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
+.||+|++..++++..+...+++.+.++|+|||.+++....
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp TCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 78999999999999999999999999999999999998854
No 47
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=1.3e-14 Score=112.96 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=84.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..+.+|+++|+++ +++.+++++. .++++...|+.... ..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----------------~~~~~~~~d~~~~~---~~- 104 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----------------KEFSITEGDFLSFE---VP- 104 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC----------------TTCCEESCCSSSCC---CC-
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC----------------CceEEEeCChhhcC---CC-
Confidence 578999999999999999999999999999954 9888887653 15677777765432 22
Q ss_pred CCccEEEEeccccCCcChHH--HHHHHHHhcCCCcEEEEEEEec
Q 029065 121 PPFDYIIGTDVVYAEHLLEP--LLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~--~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
+.||+|+++.++++..+... +++.+.++|+|||.+++..+..
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 78999999999999887766 9999999999999999998654
No 48
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.59 E-value=7.2e-15 Score=114.75 Aligned_cols=103 Identities=16% Similarity=0.243 Sum_probs=87.0
Q ss_pred CCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 43 GKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
+.+|||+|||+|..+..++..+.+|+++|++ .+++.++++...++ .++++...|+.... ...+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------------~~~~~~~~d~~~~~---~~~~ 102 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE-------------SNVEFIVGDARKLS---FEDK 102 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCCEEEECCTTSCC---SCTT
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------------CCceEEECchhcCC---CCCC
Confidence 7799999999999999999999999999995 59999999887663 36788887775432 2356
Q ss_pred CccEEEEecc--ccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 122 PFDYIIGTDV--VYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 122 ~fD~Ii~~~~--~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
+||+|+++++ +++..+...+++.+.++|+|||.+++..+.
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 8999999999 666667889999999999999999998775
No 49
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=2.4e-14 Score=108.72 Aligned_cols=125 Identities=19% Similarity=0.279 Sum_probs=95.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..+.+|+++|+++ +++.++++. .++.+...|+.... ...
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~-----------------~~~~~~~~d~~~~~---~~~ 105 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF-----------------PEARWVVGDLSVDQ---ISE 105 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------TTSEEEECCTTTSC---CCC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC-----------------CCCcEEEcccccCC---CCC
Confidence 578999999999999999999999999999954 888887763 13577777765432 235
Q ss_pred CCccEEEEe-ccccCC--cChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCCeEEEecCC
Q 029065 121 PPFDYIIGT-DVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNFNVKLVPKA 186 (199)
Q Consensus 121 ~~fD~Ii~~-~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~ 186 (199)
+.||+|+++ +++++. .....++..+.++|+|||.+++..+.........+.+.+ ..+|++..+...
T Consensus 106 ~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 106 TDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp CCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred CceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 689999998 566554 456899999999999999999988765432345555555 358888766544
No 50
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.59 E-value=1.4e-14 Score=116.67 Aligned_cols=106 Identities=21% Similarity=0.171 Sum_probs=90.3
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
..++.+|||||||+|..+..++.. +.+|+++|++ .+++.+++++..++ ..++++...|....
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------------~~~~~~~~~d~~~~--- 99 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG------------IKNVKFLQANIFSL--- 99 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT------------CCSEEEEECCGGGC---
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC------------CCCcEEEEcccccC---
Confidence 346789999999999999999987 5689999995 49999999988775 33688888777533
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
....++||+|+++.++++..+...+++.+.++|+|||.+++..+
T Consensus 100 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 100 PFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 23457899999999999999999999999999999999999875
No 51
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.59 E-value=1.1e-13 Score=107.78 Aligned_cols=129 Identities=18% Similarity=0.072 Sum_probs=94.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|..++.++.. +.+|+++|++ .+++.|++++..++ ..++.+...|+...... .
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~------------~~~v~~~~~d~~~~~~~-~ 107 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG------------VPNIKLLWVDGSDLTDY-F 107 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC------------CSSEEEEECCSSCGGGT-S
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC------------CCCEEEEeCCHHHHHhh-c
Confidence 4679999999999999999987 4679999995 59999999998875 34789998888653211 2
Q ss_pred cCCCccEEEEeccccCCc--------ChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCCeEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAEH--------LLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNFNVKLVPK 185 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~--------~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 185 (199)
..+.||+|+++.+..+.. ....++..+.++|+|||.+++..... .......+.+ ..+|.+..+..
T Consensus 108 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 108 EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR--GLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH--HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHHHCCCeeeeccc
Confidence 356899999986532211 24689999999999999999976432 2223333444 34788866654
No 52
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.58 E-value=8e-15 Score=114.14 Aligned_cols=100 Identities=17% Similarity=0.201 Sum_probs=80.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK-AV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~ 119 (199)
++.+|||||||+|..+..++..|.+|+++|+++ +++.++++ . .+.+...++.+..... ..
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~---------------~~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA---G---------------AGEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT---C---------------SSCEEECCHHHHHTTCSCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh---c---------------ccccchhhHHhhccccccc
Confidence 468999999999999999999999999999955 88888776 1 3345555554331112 22
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..+||+|+++.+++ ..+...+++.+.++|+|||.+++...
T Consensus 114 ~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 114 GKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 34699999999998 88999999999999999999999875
No 53
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.58 E-value=7.3e-15 Score=110.11 Aligned_cols=121 Identities=11% Similarity=0.089 Sum_probs=94.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..+.+|+++|+++ +++.++++ . .++++...| .....
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------------~~v~~~~~d------~~~~~ 73 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---F--------------DSVITLSDP------KEIPD 73 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---C--------------TTSEEESSG------GGSCT
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---C--------------CCcEEEeCC------CCCCC
Confidence 567999999999999999998877999999954 88888877 1 146666655 22345
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChh----------HHHHHHHHHHhCCeEEEecCC
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTS----------VHEQMLQMWKSNFNVKLVPKA 186 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~----------~~~~~~~~~~~~~~v~~~~~~ 186 (199)
+.||+|+++.++++..+...+++.+.++|+|||.+++........ ..+.+.+.+. +|++..+...
T Consensus 74 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf~~~~~~~~ 148 (170)
T 3i9f_A 74 NSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NFVVEKRFNP 148 (170)
T ss_dssp TCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TEEEEEEECS
T ss_pred CceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-CcEEEEccCC
Confidence 789999999999999999999999999999999999987654311 1334555556 8887665443
No 54
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.58 E-value=4.3e-15 Score=118.58 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=88.3
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||||||+|..+..++.. +++|+++|+++ +++.+++++... .++++...|+... +.
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~~~~~~~d~~~~---~~ 116 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN--------------NKIIFEANDILTK---EF 116 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC--------------TTEEEEECCTTTC---CC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC--------------CCeEEEECccccC---CC
Confidence 35789999999999999999987 88999999955 888887764332 3688888887643 23
Q ss_pred cCCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
..++||+|+++.++++. .+...+++.+.++|+|||.+++......
T Consensus 117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 36789999999999998 8999999999999999999999886543
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.58 E-value=2.1e-14 Score=118.21 Aligned_cols=106 Identities=14% Similarity=0.160 Sum_probs=89.3
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||||||+|..+..++.. |++|+++|+++ +++.+++++...+. ..++++...|+.+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~----- 152 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT-----------NRSRQVLLQGWEDF----- 152 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC-----------SSCEEEEESCGGGC-----
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEECChHHC-----
Confidence 35789999999999999999977 89999999954 99999998876643 24688888776432
Q ss_pred cCCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
.+.||+|++..++++. .++..+++.+.++|+|||.+++......
T Consensus 153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 2689999999999886 7899999999999999999999887654
No 56
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.58 E-value=3.1e-15 Score=122.33 Aligned_cols=125 Identities=15% Similarity=0.240 Sum_probs=88.8
Q ss_pred cCCCCCCCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhcccc--------------------
Q 029065 36 FCPSKLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQ-------------------- 92 (199)
Q Consensus 36 ~~~~~~~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~-------------------- 92 (199)
+.+..+++++|||||||+|..++.++.. +.+|+++|+++ +++.|++++...+.....
T Consensus 40 l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (292)
T 3g07_A 40 LKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTT 119 (292)
T ss_dssp SCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------
T ss_pred hhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccc
Confidence 3455678999999999999999999987 56899999955 999999886554311000
Q ss_pred -------------------------CCC-CCCCCCcEEEEEeeeCCCcc--ccccCCCccEEEEeccccCC------cCh
Q 029065 93 -------------------------MNP-GSDLLGSIQAVELDWGNEDH--IKAVAPPFDYIIGTDVVYAE------HLL 138 (199)
Q Consensus 93 -------------------------~~~-~~~~~~~i~~~~~d~~~~~~--~~~~~~~fD~Ii~~~~~~~~------~~~ 138 (199)
.+. ......++++...|+..... .....+.||+|++..++.+. ..+
T Consensus 120 ~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~ 199 (292)
T 3g07_A 120 VRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGL 199 (292)
T ss_dssp ----------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHH
T ss_pred ccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHH
Confidence 000 00111479999988865431 12235789999999987443 378
Q ss_pred HHHHHHHHHhcCCCcEEEEEEE
Q 029065 139 EPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 139 ~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..+++.+.++|+|||.+++..+
T Consensus 200 ~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 200 KRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCcEEEEecC
Confidence 8999999999999999998754
No 57
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.57 E-value=1.3e-14 Score=112.03 Aligned_cols=121 Identities=18% Similarity=0.222 Sum_probs=93.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|..++.+++.+. +|+++|+++ +++.|++++..++. .++++...|+... .
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~-----~ 122 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI------------YDIALQKTSLLAD-----V 122 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------------CCCEEEESSTTTT-----C
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CceEEEecccccc-----C
Confidence 578999999999999999998876 799999954 99999999988763 2478888777543 2
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEec
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLVP 184 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 184 (199)
.+.||+|+++.++. ....+++.+.++|+|||.++++...... .+.+.+.+. .+|++..+.
T Consensus 123 ~~~fD~i~~~~~~~---~~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 123 DGKFDLIVANILAE---ILLDLIPQLDSHLNEDGQVIFSGIDYLQ--LPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp CSCEEEEEEESCHH---HHHHHGGGSGGGEEEEEEEEEEEEEGGG--HHHHHHHHHHTTEEEEEEE
T ss_pred CCCceEEEECCcHH---HHHHHHHHHHHhcCCCCEEEEEecCccc--HHHHHHHHHHcCCceEEee
Confidence 47899999987653 3578899999999999999998665443 234444443 567775543
No 58
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.57 E-value=4.9e-15 Score=120.45 Aligned_cols=112 Identities=16% Similarity=0.167 Sum_probs=87.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||+|..+..++..|++|+++|+++ +++.|++++....... ...++.+...|+..........
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~ 128 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEP--------AFDKWVIEEANWLTLDKDVPAG 128 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSH--------HHHTCEEEECCGGGHHHHSCCT
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhccccc--------ccceeeEeecChhhCccccccC
Confidence 567999999999999999999999999999955 9999998874432100 0125667776664321000235
Q ss_pred CCccEEEEe-ccccCCcC-------hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 121 PPFDYIIGT-DVVYAEHL-------LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 121 ~~fD~Ii~~-~~~~~~~~-------~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
++||+|++. .++.+..+ ...+++.+.++|+|||.+++..+.
T Consensus 129 ~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 129 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp TCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 789999998 78888777 999999999999999999998765
No 59
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.57 E-value=3.6e-14 Score=106.73 Aligned_cols=124 Identities=10% Similarity=0.008 Sum_probs=88.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|..++.++.. +.+|+++|+++ +++.+++++..++. ..++ +...|... ..+.
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~~-~~~~d~~~--~~~~ 90 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV-----------SDRI-AVQQGAPR--AFDD 90 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-----------TTSE-EEECCTTG--GGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-----------CCCE-EEecchHh--hhhc
Confidence 5679999999999999999987 56799999955 99999999887753 2256 55555432 2222
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLVPK 185 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 185 (199)
..+.||+|+++.++++ ..+++.+.++|+|||.+++....... ...+...+. .++++..+..
T Consensus 91 ~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVES--EQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp CCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHHH--HHHHHHHHHHHCCEEEEEEE
T ss_pred cCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecccc--HHHHHHHHHHcCCeeEEEEe
Confidence 2378999999988766 78999999999999999987765422 233333332 3466554443
No 60
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=1.7e-14 Score=117.36 Aligned_cols=123 Identities=16% Similarity=0.187 Sum_probs=94.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCe-EEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCN-VITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|..++.+++.|+. |+++|++ .+++.|++|+..|+. ..++++.+.|..+...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~-----------~~~v~~~~~D~~~~~~---- 189 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----------EDRMSAYNMDNRDFPG---- 189 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----------TTTEEEECSCTTTCCC----
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CceEEEEECCHHHhcc----
Confidence 4789999999999999999999885 9999995 499999999998874 2358888877764432
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecC----hhHHHHHHHHHH-hCCeEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRS----TSVHEQMLQMWK-SNFNVKLV 183 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~----~~~~~~~~~~~~-~~~~v~~~ 183 (199)
.+.||+|+++++ .....++..+.++|+|||.+++...... ....+.+.+.+. .++.+..+
T Consensus 190 ~~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 190 ENIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp CSCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred cCCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 568999999765 3447788899999999999988776532 223445555543 47777663
No 61
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.57 E-value=9.2e-15 Score=115.28 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=84.9
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||||||+|..+..++..|. +|+++|+++ +++.++++... .++++...|+... ..
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------~~~~~~~~d~~~~---~~ 103 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---------------TGITYERADLDKL---HL 103 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---------------SSEEEEECCGGGC---CC
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---------------CCceEEEcChhhc---cC
Confidence 3578999999999999999999888 899999954 88888776422 2577777776533 23
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..+.||+|+++.++++..+...+++.+.++|+|||.+++..+
T Consensus 104 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 104 PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 357899999999999988999999999999999999999874
No 62
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.57 E-value=4.4e-15 Score=112.65 Aligned_cols=111 Identities=15% Similarity=0.203 Sum_probs=86.9
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-cc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~ 117 (199)
.++.+|||+|||+|..++.++..++ +|+++|++ .+++.|++++..++. ..++++...|+.+... ..
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~ 111 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE-----------PEKFEVRKMDANRALEQFY 111 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEESCHHHHHHHHH
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-----------CcceEEEECcHHHHHHHHH
Confidence 4678999999999999998888764 79999995 599999999988753 2368888888754211 11
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHH--HHhcCCCcEEEEEEEecC
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTI--FALSGPKTTILLGYEIRS 163 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l--~~~l~~~g~i~i~~~~~~ 163 (199)
...+.||+|+++++ |+......++..+ .++|+|||.+++..+...
T Consensus 112 ~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 112 EEKLQFDLVLLDPP-YAKQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HTTCCEEEEEECCC-GGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hcCCCCCEEEECCC-CCchhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 11568999999887 5566778888888 778999999999887643
No 63
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.57 E-value=2e-14 Score=121.82 Aligned_cols=119 Identities=18% Similarity=0.201 Sum_probs=92.3
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
..++.+|||||||+|..+..++.. +.+|+++|+++ +++.+++++..+...... .....++++...|+.+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g----~~~~~~v~~~~~d~~~l~~ 156 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFG----SPSRSNVRFLKGFIENLAT 156 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHS----STTCCCEEEEESCTTCGGG
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhccc----ccCCCceEEEEccHHHhhh
Confidence 457889999999999999999875 55899999954 999999988765210000 0002478999888865422
Q ss_pred c---cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 116 I---KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 116 ~---~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
. +...++||+|+++.++++..++..+++.+.++|+|||.+++.....
T Consensus 157 ~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 157 AEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 2 3345789999999999999999999999999999999999987653
No 64
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.57 E-value=1.7e-14 Score=111.88 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=85.2
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..|.+|+++|+++ +++.+++ .+ ..++++...|+... ..
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~------------~~~~~~~~~d~~~~----~~ 104 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HG------------LDNVEFRQQDLFDW----TP 104 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GC------------CTTEEEEECCTTSC----CC
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cC------------CCCeEEEecccccC----CC
Confidence 3567999999999999999999999999999954 8888877 22 24688888887543 34
Q ss_pred CCCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.++||+|+++.++++... ...+++.+.++|+|||.+++....+
T Consensus 105 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 678999999999988776 4899999999999999999987644
No 65
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.57 E-value=2.2e-14 Score=119.60 Aligned_cols=112 Identities=18% Similarity=0.117 Sum_probs=86.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc-ccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI-KAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~ 119 (199)
++++|||+|||+|..++.++..|++|+++|+++ +++.|++|+..+++. ..++++.+.|+...... ...
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~----------~~~v~~i~~D~~~~l~~~~~~ 222 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLE----------QAPIRWICEDAMKFIQREERR 222 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCT----------TSCEEEECSCHHHHHHHHHHH
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCC----------ccceEEEECcHHHHHHHHHhc
Confidence 467999999999999999999999999999955 999999999988642 11478888776432110 011
Q ss_pred CCCccEEEEeccccCC----------cChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 120 APPFDYIIGTDVVYAE----------HLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~----------~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
.+.||+|+++++.+.. ..+..++..+.++|+|||.+++......
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 4689999999886542 2467889999999999999887776543
No 66
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.57 E-value=1.3e-14 Score=115.68 Aligned_cols=105 Identities=16% Similarity=0.173 Sum_probs=87.7
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
-++.+|||+|||+|..+..++..+.+|+++|+++ +++.+++++ ... ..++.+...|+... +..
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~------------~~~~~~~~~d~~~~---~~~ 101 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGV------------DRKVQVVQADARAI---PLP 101 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTS------------CTTEEEEESCTTSC---CSC
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hcc------------CCceEEEEcccccC---CCC
Confidence 3578999999999999999999899999999955 999998886 221 34788888877543 233
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.+.||+|+++.++++..+...++..+.++|+|||.+++....
T Consensus 102 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 102 DESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp TTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEEecC
Confidence 578999999999999889999999999999999999887444
No 67
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.56 E-value=3.7e-14 Score=112.29 Aligned_cols=129 Identities=13% Similarity=0.017 Sum_probs=96.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC-CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG-CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g-~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|..+..++..+ .+|+++|+++ +++.+++++..++ ..++++...|+... ...
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------------~~~~~~~~~d~~~~---~~~ 143 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG------------KRVRNYFCCGLQDF---TPE 143 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG------------GGEEEEEECCGGGC---CCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC------------CceEEEEEcChhhc---CCC
Confidence 57899999999999999988775 4799999954 9999998876553 12577777776433 233
Q ss_pred CCCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEecCh------------hHHHHHHHHHH-hCCeEEEec
Q 029065 120 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEIRST------------SVHEQMLQMWK-SNFNVKLVP 184 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~~~~------------~~~~~~~~~~~-~~~~v~~~~ 184 (199)
.+.||+|+++.++++..+ ...+++.+.++|+|||.+++....... ...+.+.+.+. .||++..+.
T Consensus 144 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 144 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 468999999999988766 559999999999999999998764321 01345555553 578886654
Q ss_pred C
Q 029065 185 K 185 (199)
Q Consensus 185 ~ 185 (199)
.
T Consensus 224 ~ 224 (241)
T 2ex4_A 224 R 224 (241)
T ss_dssp E
T ss_pred e
Confidence 3
No 68
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.56 E-value=2.3e-14 Score=115.07 Aligned_cols=122 Identities=20% Similarity=0.219 Sum_probs=93.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|.+++.+++.|++|+++|++ .+++.+++|+..++. . +++...|+... ..
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~------------~-v~~~~~d~~~~----~~ 181 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV------------R-PRFLEGSLEAA----LP 181 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC------------C-CEEEESCHHHH----GG
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCC------------c-EEEEECChhhc----Cc
Confidence 357899999999999999999999999999995 499999999988863 2 67777666431 12
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEec
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLVP 184 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 184 (199)
.++||+|+++.+. ..+..++..+.++|+|||.++++...... ...+.+.+. .+|++..+.
T Consensus 182 ~~~fD~Vv~n~~~---~~~~~~l~~~~~~LkpgG~lils~~~~~~--~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 182 FGPFDLLVANLYA---ELHAALAPRYREALVPGGRALLTGILKDR--APLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp GCCEEEEEEECCH---HHHHHHHHHHHHHEEEEEEEEEEEEEGGG--HHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEECCcH---HHHHHHHHHHHHHcCCCCEEEEEeeccCC--HHHHHHHHHHCCCEEEEEe
Confidence 4689999997543 24678999999999999999998765543 244555553 478886553
No 69
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=1.6e-14 Score=113.62 Aligned_cols=106 Identities=13% Similarity=0.195 Sum_probs=86.3
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
..++.+|||+|||+|..+..++.. +.+|+++|++ .+++.+++++... .++++...|+....
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~~~~~~~d~~~~~-- 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--------------LKVKYIEADYSKYD-- 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--------------TTEEEEESCTTTCC--
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--------------CCEEEEeCchhccC--
Confidence 346789999999999999999987 7789999995 4999998876433 26788887775432
Q ss_pred cccCCCccEEEEeccccCCcChH--HHHHHHHHhcCCCcEEEEEEEecC
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~--~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
. .+.||+|+++.++++..+.. .+++.+.++|+|||.+++++....
T Consensus 106 -~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 106 -F-EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp -C-CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred -C-CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 2 27899999999998876554 599999999999999999986543
No 70
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.56 E-value=1.3e-14 Score=122.86 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=89.7
Q ss_pred CCCCCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 37 CPSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
+....++++|||||||+|.+++.+++.|+ +|+++|.+++++.|++++..++. ..++++...|+.+..
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNL-----------DHIVEVIEGSVEDIS- 125 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTC-----------TTTEEEEESCGGGCC-
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCC-----------CCeEEEEECchhhcC-
Confidence 44567889999999999999999999988 79999998999999999988864 346899988875442
Q ss_pred ccccCCCccEEEEeccccC---CcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 116 IKAVAPPFDYIIGTDVVYA---EHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~---~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
. .++||+|++..+.|. ...+..++..+.++|+|||.+++...
T Consensus 126 --~-~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 126 --L-PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp --C-SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred --c-CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 1 278999999765555 36788999999999999998866543
No 71
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.9e-14 Score=116.52 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=85.7
Q ss_pred CCCcEEEeCCCcChHHHHHHh---hCCeEEEeechh-HHHHHHHHHHHh-hhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMAL---LGCNVITTDQIE-VLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~---~g~~v~~~D~~~-~l~~a~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++.+|||||||+|..+..++. .+.+|+++|+++ +++.|++++... +. ..++++...|+.+....
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----------~~~v~~~~~d~~~~~~~ 104 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-----------YKNVSFKISSSDDFKFL 104 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-----------CTTEEEEECCTTCCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-----------CCceEEEEcCHHhCCcc
Confidence 578999999999999999994 577899999955 999999988765 21 34789999888654321
Q ss_pred c---ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEE
Q 029065 117 K---AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILL 157 (199)
Q Consensus 117 ~---~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i 157 (199)
. ...++||+|+++.++++. ++..+++.+.++|+|||.+++
T Consensus 105 ~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 105 GADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 1 012689999999999999 999999999999999999887
No 72
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=3.8e-14 Score=112.88 Aligned_cols=101 Identities=11% Similarity=-0.028 Sum_probs=85.0
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.++.+|||||||+|..+..++.. +.+|+++|+++ +++.++++. .++.+...|+....
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~--- 91 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----------------PNTNFGKADLATWK--- 91 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------------TTSEEEECCTTTCC---
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------------CCcEEEECChhhcC---
Confidence 35679999999999999999987 78899999954 988888761 15677777765432
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||+|+++.++++..+...+++.+.++|+|||.+++..+..
T Consensus 92 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 92 -PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp -CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred -ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 35789999999999999999999999999999999999988643
No 73
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.56 E-value=5.2e-15 Score=119.14 Aligned_cols=147 Identities=14% Similarity=0.161 Sum_probs=95.1
Q ss_pred CCCCCCcEEEeCCCcChHHHHHHhhCCe-EEEeechh-HHHHHHHHHHHhhhcccc-------C--CCCCC--------C
Q 029065 39 SKLKGKRVIELGAGCGVAGFGMALLGCN-VITTDQIE-VLPLLKRNVEWNTSRISQ-------M--NPGSD--------L 99 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~-------~--~~~~~--------~ 99 (199)
...++++|||||||+|..++.++..|+. |+++|+++ +++.|++++..+...+.. + +...+ .
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567889999999999988888888875 99999965 999998876543100000 0 00000 0
Q ss_pred CCcEE-EEEeeeCCCcccc-ccCCCccEEEEeccccCC----cChHHHHHHHHHhcCCCcEEEEEEEecCh---------
Q 029065 100 LGSIQ-AVELDWGNEDHIK-AVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGPKTTILLGYEIRST--------- 164 (199)
Q Consensus 100 ~~~i~-~~~~d~~~~~~~~-~~~~~fD~Ii~~~~~~~~----~~~~~~l~~l~~~l~~~g~i~i~~~~~~~--------- 164 (199)
...+. +...|........ ...++||+|+++.++++. .+...+++.+.++|+|||.++++......
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEe
Confidence 01233 6677766532111 124689999999988762 45568889999999999999998643210
Q ss_pred ----hHHHHHHHHHH-hCCeEEEecC
Q 029065 165 ----SVHEQMLQMWK-SNFNVKLVPK 185 (199)
Q Consensus 165 ----~~~~~~~~~~~-~~~~v~~~~~ 185 (199)
-..+.+.+.+. .||++..+..
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEEEEee
Confidence 01344555554 5788765543
No 74
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.55 E-value=2.2e-14 Score=120.22 Aligned_cols=107 Identities=20% Similarity=0.195 Sum_probs=88.4
Q ss_pred CCCCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 38 PSKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
....++++|||||||+|.+++.+++.|+ +|+++|++++++.|++++..++. ..++++...|+.+..
T Consensus 62 ~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~-- 128 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKL-----------DHVVTIIKGKVEEVE-- 128 (349)
T ss_dssp HHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC--
T ss_pred cccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCC-----------CCcEEEEECcHHHcc--
Confidence 3456789999999999999999999987 79999998899999999988864 346899998886542
Q ss_pred cccCCCccEEEEecccc---CCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 KAVAPPFDYIIGTDVVY---AEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~---~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
...++||+|++..+.+ +......++..+.++|+|||.+++.
T Consensus 129 -~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 129 -LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp -CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred -CCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 3357899999976543 4678999999999999999997543
No 75
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.55 E-value=2.4e-14 Score=116.37 Aligned_cols=104 Identities=17% Similarity=0.142 Sum_probs=88.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++.+|||||||+|..+..++.. +++|+++|+++ +++.+++++...+ .++++...|+.+..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-------------~~v~~~~~d~~~~~-- 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-------------YDSEFLEGDATEIE-- 85 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-------------SEEEEEESCTTTCC--
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEEcchhhcC--
Confidence 35789999999999999999987 57899999955 9999999876653 26788887776432
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
. .++||+|++..++++..+...+++.+.++|+|||.+++..+.
T Consensus 86 -~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 -L-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -C-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -c-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 2 468999999999999999999999999999999999988766
No 76
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.55 E-value=2e-14 Score=130.48 Aligned_cols=140 Identities=19% Similarity=0.171 Sum_probs=108.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+|++|||+|||+|..++.++..|+. |+++|+++ +++.+++|+..|+.. ..++++.+.|.... ...
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~----------~~~v~~i~~D~~~~--l~~ 605 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----------GRAHRLIQADCLAW--LRE 605 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----------STTEEEEESCHHHH--HHH
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----------ccceEEEecCHHHH--HHh
Confidence 36899999999999999999998886 99999965 999999999999742 13788888777532 222
Q ss_pred cCCCccEEEEeccccCC-----------cChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeEEEecCCC
Q 029065 119 VAPPFDYIIGTDVVYAE-----------HLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNVKLVPKAK 187 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~-----------~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 187 (199)
..++||+|+++++.+.. ..+..++..+.++|+|||.++++...+........+. ..+++++.+....
T Consensus 606 ~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~--~~g~~~~~i~~~~ 683 (703)
T 3v97_A 606 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLA--KLGLKAQEITQKT 683 (703)
T ss_dssp CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHH--HTTEEEEECTTTT
T ss_pred cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHH--HcCCceeeeeecc
Confidence 34689999999886541 3467789999999999999999887754432222222 2468888999999
Q ss_pred cCcccCC
Q 029065 188 ESTMWGN 194 (199)
Q Consensus 188 ~~~~~~~ 194 (199)
++++|..
T Consensus 684 lp~df~~ 690 (703)
T 3v97_A 684 LSQDFAR 690 (703)
T ss_dssp CCGGGTT
T ss_pred CCCCCCC
Confidence 9999953
No 77
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.55 E-value=2.4e-14 Score=115.98 Aligned_cols=120 Identities=18% Similarity=0.317 Sum_probs=90.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|.+++.++.. +.+|+++|+++ +++.+++|+..++. .++++...|+... .
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~------------~~v~~~~~d~~~~----~ 172 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI------------KNIHILQSDWFSA----L 172 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC------------CSEEEECCSTTGG----G
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CceEEEEcchhhh----c
Confidence 5679999999999999999965 66899999955 99999999988763 3688888887532 1
Q ss_pred cCCCccEEEEeccccCC-------------------------cChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHH
Q 029065 119 VAPPFDYIIGTDVVYAE-------------------------HLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQM 173 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~-------------------------~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~ 173 (199)
..++||+|++++++... ..+..++..+.++|+|||.+++............+++.
T Consensus 173 ~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~ 252 (276)
T 2b3t_A 173 AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252 (276)
T ss_dssp TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHH
T ss_pred ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHH
Confidence 24689999999776543 23577889999999999999998765554433333333
Q ss_pred HHhCCe
Q 029065 174 WKSNFN 179 (199)
Q Consensus 174 ~~~~~~ 179 (199)
.+|.
T Consensus 253 --~Gf~ 256 (276)
T 2b3t_A 253 --AGYH 256 (276)
T ss_dssp --TTCT
T ss_pred --CCCc
Confidence 3564
No 78
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.55 E-value=2.1e-14 Score=110.86 Aligned_cols=105 Identities=10% Similarity=0.063 Sum_probs=84.7
Q ss_pred CCCcEEEeCCCcChH-HHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVA-GFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~-sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|.. ...++..+.+|+++|+++ +++.+++++..++ .++++...|+... +..
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------------~~~~~~~~d~~~~---~~~ 86 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN-------------FKLNISKGDIRKL---PFK 86 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT-------------CCCCEEECCTTSC---CSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEECchhhC---CCC
Confidence 468999999999986 445567788999999955 9999999887653 2567777776543 233
Q ss_pred CCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.+.||+|+++.++++. .+...+++.+.++|+|||.+++.....
T Consensus 87 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 87 DESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp TTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 5689999999998886 788999999999999999999987653
No 79
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=1.5e-14 Score=114.64 Aligned_cols=110 Identities=15% Similarity=-0.038 Sum_probs=87.8
Q ss_pred CCCCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 39 SKLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
...++.+|||||||+|..+..++..+.+|+++|+++ +++.++++.. ..++++...|+.+.....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~---------------~~~~~~~~~d~~~~~~~~ 117 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT---------------AANISYRLLDGLVPEQAA 117 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC---------------CTTEEEEECCTTCHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc---------------ccCceEEECccccccccc
Confidence 344678999999999999999999999999999955 9999988752 226788888876543211
Q ss_pred c--cCCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 118 A--VAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 118 ~--~~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
. ....||+|+++.++++.. +...+++.+.++|+|||.+++......
T Consensus 118 ~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 118 QIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred ccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 1 113599999999999877 889999999999999999888876543
No 80
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=6.3e-16 Score=119.48 Aligned_cols=127 Identities=17% Similarity=0.182 Sum_probs=73.3
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc-
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI- 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~- 116 (199)
.++.+|||+|||+|..++.++.. +.+|+++|+++ +++.+++++..++. ++++...|+.+....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~~~~~ 95 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-------------VVDWAAADGIEWLIER 95 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------------------CCHHHHHHHHHHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-------------ceEEEEcchHhhhhhh
Confidence 46789999999999999999988 45799999955 99999999877642 456666666431100
Q ss_pred cccCCCccEEEEeccccCCcCh--------------------------HHHHHHHHHhcCCCcE-EEEEEEecChhHHHH
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLL--------------------------EPLLQTIFALSGPKTT-ILLGYEIRSTSVHEQ 169 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~--------------------------~~~l~~l~~~l~~~g~-i~i~~~~~~~~~~~~ 169 (199)
....+.||+|+++++++..... ..+++.+.++|+|||. +++............
T Consensus 96 ~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 175 (215)
T 4dzr_A 96 AERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVAR 175 (215)
T ss_dssp HHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHH
T ss_pred hhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHH
Confidence 0113789999999887653322 7788888899999999 666554444433344
Q ss_pred HHHHHHhCCeE
Q 029065 170 MLQMWKSNFNV 180 (199)
Q Consensus 170 ~~~~~~~~~~v 180 (199)
++..+..+|..
T Consensus 176 ~l~~~~~gf~~ 186 (215)
T 4dzr_A 176 LFAPWRERGFR 186 (215)
T ss_dssp HTGGGGGGTEE
T ss_pred HHHHhhcCCce
Confidence 44423445643
No 81
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=1e-13 Score=104.28 Aligned_cols=119 Identities=14% Similarity=0.168 Sum_probs=92.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..+.+|+++|+++ +++.+++++..++ ..++++...|+.+ ...
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~------------~~~~~~~~~d~~~----~~~ 97 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFN------------IKNCQIIKGRAED----VLD 97 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTT------------CCSEEEEESCHHH----HGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcC------------CCcEEEEECCccc----ccc
Confidence 3577999999999999999999777899999954 9999999998875 2468888888754 122
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLV 183 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~ 183 (199)
.+.||+|+++.+ .....+++.+.++ |||.+++....... ...+.+.+. .+|.++.+
T Consensus 98 ~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~~--~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 98 KLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLEN--AAKIINEFESRGYNVDAV 154 (183)
T ss_dssp GCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHHH--HHHHHHHHHHTTCEEEEE
T ss_pred CCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccccc--HHHHHHHHHHcCCeEEEE
Confidence 368999999987 7888999999998 99999988754322 344445543 35777654
No 82
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.54 E-value=8.5e-15 Score=110.56 Aligned_cols=109 Identities=13% Similarity=0.223 Sum_probs=85.1
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++++|||+|||+|..++.++..+. +|+++|+++ +++.|++++..++. ..++++...|+.+. ...
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~--~~~ 96 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-----------ENRFTLLKMEAERA--IDC 96 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-----------GGGEEEECSCHHHH--HHH
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCceEEEECcHHHh--HHh
Confidence 4678999999999999999998864 799999954 99999999987753 23678888777532 122
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHH--HhcCCCcEEEEEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIF--ALSGPKTTILLGYEIRS 163 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~--~~l~~~g~i~i~~~~~~ 163 (199)
..+.||+|++++++ +......++..+. ++|+|||.+++......
T Consensus 97 ~~~~fD~i~~~~~~-~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 97 LTGRFDLVFLDPPY-AKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp BCSCEEEEEECCSS-HHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hcCCCCEEEECCCC-CcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 34579999998764 3455677788887 88999999999887654
No 83
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.54 E-value=1.7e-14 Score=122.58 Aligned_cols=142 Identities=14% Similarity=0.054 Sum_probs=97.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCC-cEEEEEeeeCCCcc-c
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLG-SIQAVELDWGNEDH-I 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~-~ 116 (199)
.++++|||+|||+|.+++.+|..|+ +|+++|+++ +++.|++|+..|+. .. ++++...|...... .
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~-----------~~~~v~~~~~D~~~~l~~~ 279 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL-----------DMANHQLVVMDVFDYFKYA 279 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC-----------CCTTEEEEESCHHHHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CccceEEEECCHHHHHHHH
Confidence 4678999999999999999999887 699999955 99999999999873 22 68888877753211 1
Q ss_pred cccCCCccEEEEeccccC-----C----cChHHHHHHHHHhcCCCcEEEEEEEecCh--hHHHHHHHHHHhCCeEEEecC
Q 029065 117 KAVAPPFDYIIGTDVVYA-----E----HLLEPLLQTIFALSGPKTTILLGYEIRST--SVHEQMLQMWKSNFNVKLVPK 185 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~-----~----~~~~~~l~~l~~~l~~~g~i~i~~~~~~~--~~~~~~~~~~~~~~~v~~~~~ 185 (199)
.....+||+|+++++.+. . ..+..++..+.++|+|||.++++...... +.+...............+..
T Consensus 280 ~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 359 (385)
T 2b78_A 280 RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDL 359 (385)
T ss_dssp HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 111358999999988753 1 12455677788999999999998876543 222233333222222225555
Q ss_pred CCcCcccC
Q 029065 186 AKESTMWG 193 (199)
Q Consensus 186 ~~~~~~~~ 193 (199)
...+++|-
T Consensus 360 ~~~~~D~p 367 (385)
T 2b78_A 360 QQLPSDFA 367 (385)
T ss_dssp ECCCTTSC
T ss_pred CCCCCCCC
Confidence 55555553
No 84
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.54 E-value=3.8e-14 Score=108.73 Aligned_cols=107 Identities=14% Similarity=0.071 Sum_probs=83.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C--CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G--CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|..++.+++. + .+|+++|++ .+++.|++++..++. ..++++...|+.+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~-- 88 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----------IDRVTLIKDGHQNMDK-- 88 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----------GGGEEEECSCGGGGGG--
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCCeEEEECCHHHHhh--
Confidence 5789999999999999999976 2 589999995 499999999988753 2478888888754321
Q ss_pred ccCCCccEEEEeccccCCc---------ChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEH---------LLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~---------~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...++||+|+++.+++... ....+++.+.++|+|||.+++....
T Consensus 89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 2347899999987663311 3457999999999999999888643
No 85
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.54 E-value=3.7e-14 Score=112.59 Aligned_cols=127 Identities=11% Similarity=0.036 Sum_probs=95.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|..+..++..+. +|+++|+++ +++.+++++... .++++...|+... ...
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~~~~~~~d~~~~---~~~ 155 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--------------PVGKFILASMETA---TLP 155 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--------------SEEEEEESCGGGC---CCC
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--------------CceEEEEccHHHC---CCC
Confidence 578999999999999999987754 599999954 999998875432 2678888777543 233
Q ss_pred CCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEecCh-------------hHHHHHHHHH-HhCCeEEEe
Q 029065 120 APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIRST-------------SVHEQMLQMW-KSNFNVKLV 183 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~~~-------------~~~~~~~~~~-~~~~~v~~~ 183 (199)
.+.||+|++..++++. .+...+++.+.++|+|||.+++....... ...+.+.+.+ ..||++..+
T Consensus 156 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred CCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 5689999999999887 56899999999999999999998852110 0123444554 358988655
Q ss_pred cC
Q 029065 184 PK 185 (199)
Q Consensus 184 ~~ 185 (199)
..
T Consensus 236 ~~ 237 (254)
T 1xtp_A 236 AF 237 (254)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 86
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.54 E-value=7.7e-14 Score=118.13 Aligned_cols=108 Identities=13% Similarity=0.111 Sum_probs=83.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+.+|||+|||+|.+++.+++. +.+|+++|+++ +++.+++|+..++... ..++++...|.... .
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~---------~~~v~~~~~D~~~~----~ 288 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA---------LDRCEFMINNALSG----V 288 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGG---------GGGEEEEECSTTTT----C
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCc---------CceEEEEechhhcc----C
Confidence 3579999999999999999988 57899999955 9999999999886420 12467777776542 2
Q ss_pred cCCCccEEEEeccccCC-----cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYAE-----HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~-----~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..++||+|++++++++. .....+++.+.++|+|||.++++....
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 34689999999998752 234578999999999999999977543
No 87
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.54 E-value=3.6e-14 Score=118.56 Aligned_cols=104 Identities=20% Similarity=0.229 Sum_probs=85.7
Q ss_pred CCCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 39 SKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
...++++|||||||+|.+++.+++.|+ +|+++|++++++.|++++..++. ..++++...|..+. .
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~-----------~~~i~~~~~d~~~~---~ 126 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKL-----------EDTITLIKGKIEEV---H 126 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTS---C
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCC-----------CCcEEEEEeeHHHh---c
Confidence 346788999999999999999999887 69999997799999999988763 35789888877643 2
Q ss_pred ccCCCccEEEEecc---ccCCcChHHHHHHHHHhcCCCcEEE
Q 029065 118 AVAPPFDYIIGTDV---VYAEHLLEPLLQTIFALSGPKTTIL 156 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~---~~~~~~~~~~l~~l~~~l~~~g~i~ 156 (199)
...++||+|+++.+ +.+...+..++..+.++|+|||.++
T Consensus 127 ~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 23468999999874 3446678889999999999999887
No 88
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.53 E-value=6.8e-14 Score=114.30 Aligned_cols=108 Identities=18% Similarity=0.187 Sum_probs=85.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
.+.+|||||||+|..+..++..|.+|+++|+++ +++.|++++...+... ..++++...|+.+.. . .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~---------~~~v~~~~~d~~~~~---~-~ 148 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADV---------RDRCTLVQGDMSAFA---L-D 148 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHH---------HTTEEEEECBTTBCC---C-S
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhccccc---------ccceEEEeCchhcCC---c-C
Confidence 345999999999999999999999999999954 9999999887653210 147899998886432 2 5
Q ss_pred CCccEEEEe-ccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 121 PPFDYIIGT-DVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 121 ~~fD~Ii~~-~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
+.||+|+++ .++++.. ....+++.+.++|+|||.+++.....
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 789999865 4454433 47899999999999999999987654
No 89
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=1e-13 Score=112.07 Aligned_cols=100 Identities=17% Similarity=0.217 Sum_probs=84.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||+|..+..++..+.+|+++|+++ +++.++++. .++.+...|+.... . .
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~---~-~ 115 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY-----------------PHLHFDVADARNFR---V-D 115 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------TTSCEEECCTTTCC---C-S
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-----------------CCCEEEECChhhCC---c-C
Confidence 567999999999999999999889999999954 988887764 14567777765432 2 4
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
+.||+|+++.++++..++..+++.+.++|+|||.+++..+..
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 689999999999998999999999999999999999988764
No 90
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.53 E-value=3.7e-14 Score=111.45 Aligned_cols=109 Identities=10% Similarity=-0.005 Sum_probs=83.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+.+|||||||+|..++.+|... ..|+|+|++ ++++.|++++..++ ..++++...|..+......
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~------------l~nv~~~~~Da~~~l~~~~ 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG------------LSNLRVMCHDAVEVLHKMI 101 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT------------CSSEEEECSCHHHHHHHHS
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC------------CCcEEEEECCHHHHHHHHc
Confidence 46799999999999999999874 469999995 49999999998776 3468888877643211112
Q ss_pred cCCCccEEEEe--ccccCCcCh------HHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGT--DVVYAEHLL------EPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~--~~~~~~~~~------~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||.|+++ ++....... ..+++.+.++|+|||.++++....
T Consensus 102 ~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 102 PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE 153 (218)
T ss_dssp CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 36789999988 444333332 259999999999999999987643
No 91
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.53 E-value=1.2e-14 Score=117.02 Aligned_cols=99 Identities=14% Similarity=0.060 Sum_probs=80.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
.+.+|||||||+|..+..++..|.+|+++|+++ |++.|++ ..++.+.+.+..+ .+..+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~------------------~~~v~~~~~~~e~---~~~~~ 97 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR------------------HPRVTYAVAPAED---TGLPP 97 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC------------------CTTEEEEECCTTC---CCCCS
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh------------------cCCceeehhhhhh---hcccC
Confidence 356899999999999999999999999999965 8766542 2367888877643 34456
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
+.||+|+++.++++. +...++..+.++|+|||.+.+.....
T Consensus 98 ~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 98 ASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp SCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 899999999998665 58899999999999999987766543
No 92
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=2.4e-14 Score=112.84 Aligned_cols=103 Identities=14% Similarity=0.037 Sum_probs=85.3
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..+.+|+++|++ .+++.++++....+. ++.+...|+.... .
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~~---~- 98 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-------------KPRLACQDISNLN---I- 98 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-------------CCEEECCCGGGCC---C-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC-------------CeEEEecccccCC---c-
Confidence 367899999999999999999999999999995 499999998876531 5677777765332 2
Q ss_pred CCCccEEEEec-cccCC---cChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 APPFDYIIGTD-VVYAE---HLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 ~~~fD~Ii~~~-~~~~~---~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
.+.||+|+++. ++++. .+...+++.+.++|+|||.+++..+
T Consensus 99 ~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 99 NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 26899999997 88886 6788999999999999999988654
No 93
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.52 E-value=2.8e-14 Score=110.21 Aligned_cols=118 Identities=18% Similarity=0.312 Sum_probs=89.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|..++.++.. +.+|+++|++ .+++.+++++..++. .++++...|+....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------~~v~~~~~d~~~~~---- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL------------ENIEPVQSRVEEFP---- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------------SSEEEEECCTTTSC----
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCeEEEecchhhCC----
Confidence 4789999999999999999976 6789999995 499999999887753 35888888876442
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeEEEe
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNVKLV 183 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 183 (199)
..++||+|+++.. ..+..++..+.++|+|||.+++.......+ . +..+..+|++..+
T Consensus 129 ~~~~~D~i~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---~-~~~~~~g~~~~~~ 185 (207)
T 1jsx_A 129 SEPPFDGVISRAF----ASLNDMVSWCHHLPGEQGRFYALKGQMPED---E-IALLPEEYQVESV 185 (207)
T ss_dssp CCSCEEEEECSCS----SSHHHHHHHHTTSEEEEEEEEEEESSCCHH---H-HHTSCTTEEEEEE
T ss_pred ccCCcCEEEEecc----CCHHHHHHHHHHhcCCCcEEEEEeCCCchH---H-HHHHhcCCceeee
Confidence 2468999997642 678899999999999999998876544332 2 2222237776553
No 94
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.52 E-value=8.8e-15 Score=116.84 Aligned_cols=147 Identities=15% Similarity=0.188 Sum_probs=97.7
Q ss_pred CCCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccc---------cCCCCCCC--------
Q 029065 39 SKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRIS---------QMNPGSDL-------- 99 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~---------~~~~~~~~-------- 99 (199)
...++++|||||||+|..++.++..+. +|+++|+++ +++.+++++..+..... ..+...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 345778999999999999999998888 799999955 99999887644310000 00000000
Q ss_pred CCcE-EEEEeeeCCCccc-cccCCCccEEEEecccc----CCcChHHHHHHHHHhcCCCcEEEEEEEecC----------
Q 029065 100 LGSI-QAVELDWGNEDHI-KAVAPPFDYIIGTDVVY----AEHLLEPLLQTIFALSGPKTTILLGYEIRS---------- 163 (199)
Q Consensus 100 ~~~i-~~~~~d~~~~~~~-~~~~~~fD~Ii~~~~~~----~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~---------- 163 (199)
..++ .+...|+...... ....+.||+|+++.+++ +...+..+++.+.++|+|||.+++......
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 0126 7788777654321 11126899999999988 556788999999999999999988763211
Q ss_pred ---hhHHHHHHHHH-HhCCeEEEecC
Q 029065 164 ---TSVHEQMLQMW-KSNFNVKLVPK 185 (199)
Q Consensus 164 ---~~~~~~~~~~~-~~~~~v~~~~~ 185 (199)
.-..+.+.+.+ ..||++..+..
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccCHHHHHHHHHHCCCEEEEEEE
Confidence 00123444555 35898866554
No 95
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.51 E-value=7.8e-14 Score=107.97 Aligned_cols=100 Identities=16% Similarity=0.128 Sum_probs=82.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|..+..+ +. +|+++|+++ +++.++++. . ++.+...|.... +..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~--~---------------~~~~~~~d~~~~---~~~ 92 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA--P---------------EATWVRAWGEAL---PFP 92 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC--T---------------TSEEECCCTTSC---CSC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC--C---------------CcEEEEcccccC---CCC
Confidence 6789999999999988777 77 899999954 988888775 1 456666665432 233
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecCh
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
.++||+|+++.++++..+...+++.+.++|+|||.++++.+....
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 93 GESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp SSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred CCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 568999999999999999999999999999999999999887654
No 96
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.51 E-value=9.6e-14 Score=104.75 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=85.8
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|.+++.+++.+ +|+++|+++ +++. .+ ++++...|+.+. ..
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~------~~---------------~~~~~~~d~~~~----~~ 75 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES------HR---------------GGNLVRADLLCS----IN 75 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT------CS---------------SSCEEECSTTTT----BC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc------cc---------------CCeEEECChhhh----cc
Confidence 456799999999999999999999 999999955 7665 11 467777777542 12
Q ss_pred CCCccEEEEeccccCCcC---------hHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEecCCC
Q 029065 120 APPFDYIIGTDVVYAEHL---------LEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLVPKAK 187 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~---------~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 187 (199)
.+.||+|++++++++... ...++..+.+.+ |||.+++....... .+.+.+.+. .+|++..+....
T Consensus 76 ~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~--~~~l~~~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 76 QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR--PKEVLARLEERGYGTRILKVRK 150 (170)
T ss_dssp GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC--HHHHHHHHHHTTCEEEEEEEEE
T ss_pred cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC--HHHHHHHHHHCCCcEEEEEeec
Confidence 368999999988775433 366778888888 99999998765433 234444443 478876665543
No 97
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.51 E-value=4.9e-14 Score=114.34 Aligned_cols=109 Identities=16% Similarity=0.078 Sum_probs=87.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||||||+|..+..++..+. +|+++|+++ +++.|++++...+. ..++.+...|+..... .
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~--~ 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR-----------RFKVFFRAQDSYGRHM--D 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC-----------SSEEEEEESCTTTSCC--C
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CccEEEEECCcccccc--C
Confidence 3678999999999998888888876 799999954 99999998876542 2367888877764421 1
Q ss_pred cCCCccEEEEeccccC----CcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYA----EHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~----~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||+|++..++++ ..+...+++.+.++|+|||.+++..+..
T Consensus 130 ~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3568999999988865 4667899999999999999999988754
No 98
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.51 E-value=5.5e-14 Score=111.22 Aligned_cols=102 Identities=17% Similarity=0.050 Sum_probs=80.9
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
..++.+|||||||+|..+..++..|.+|+++|+++ +++.++++ +++...|..+.. .+.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--------------------~~~~~~d~~~~~-~~~ 97 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK--------------------FNVVKSDAIEYL-KSL 97 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT--------------------SEEECSCHHHHH-HTS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh--------------------cceeeccHHHHh-hhc
Confidence 34578999999999999999999999999999955 88877665 244444443211 022
Q ss_pred cCCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..++||+|+++.++++.. ++..+++.+.++|+|||.+++..+..
T Consensus 98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 357899999999999877 56999999999999999999988764
No 99
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=1.3e-13 Score=117.47 Aligned_cols=107 Identities=15% Similarity=0.140 Sum_probs=82.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
+|++|||+|||+|..++.++..|++|+++|+++ +++.|++|+..|+.. ..+.+.|..+. .....
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~-------------~~~~~~D~~~~--l~~~~ 278 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR-------------VDIRHGEALPT--LRGLE 278 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-------------CEEEESCHHHH--HHTCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC-------------CcEEEccHHHH--HHHhc
Confidence 389999999999999999999999999999955 999999999999742 13445554321 11113
Q ss_pred CCccEEEEeccccCC---------cChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 121 PPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~---------~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
+.||+|+++++.+.. ..+..++..+.++|+|||.++++.....
T Consensus 279 ~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 279 GPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 449999999886553 2456888888999999999887776544
No 100
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.50 E-value=3.6e-13 Score=105.20 Aligned_cols=128 Identities=16% Similarity=0.098 Sum_probs=89.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+.+|||||||+|..++.+|.. +.+|+++|++. +++.|++++..++ ..++.+...|...... ..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~------------~~nv~~~~~d~~~l~~-~~ 104 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE------------AQNVKLLNIDADTLTD-VF 104 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC------------CSSEEEECCCGGGHHH-HC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC------------CCCEEEEeCCHHHHHh-hc
Confidence 4679999999999999999987 56899999954 9999999988775 3468888888754211 12
Q ss_pred cCCCccEEEEeccccCCc--------ChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCCeEEEec
Q 029065 119 VAPPFDYIIGTDVVYAEH--------LLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNFNVKLVP 184 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~--------~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 184 (199)
..+.||.|+++-+.-+.. ....+++.+.++|+|||.+++....... .....+.+ ..+|....+.
T Consensus 105 ~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~--~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 105 EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGL--FEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHH--HHHHHHHHHHHTCEEEEEE
T ss_pred CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHH--HHHHHHHHHHCCCcccccc
Confidence 356799998763322111 1478999999999999999988743211 22223333 2367665443
No 101
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=1.5e-13 Score=104.09 Aligned_cols=122 Identities=17% Similarity=0.180 Sum_probs=91.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..+.+|+++|++ .+++.+++++..++. ..++.+...|+... . ..
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~--~-~~ 97 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL-----------GDNVTLMEGDAPEA--L-CK 97 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-----------CTTEEEEESCHHHH--H-TT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCC-----------CcceEEEecCHHHh--c-cc
Confidence 357899999999999999999988889999995 599999999887753 24688888776431 1 11
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEE
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVK 181 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~ 181 (199)
.+.||+|+++.++ ..+..+++.+.++|+|||.+++....... ...+.+.+. .+|.++
T Consensus 98 ~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~~~~--~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 98 IPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAILLET--KFEAMECLRDLGFDVN 155 (192)
T ss_dssp SCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECBHHH--HHHHHHHHHHTTCCCE
T ss_pred CCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecCcch--HHHHHHHHHHCCCceE
Confidence 2589999998765 35789999999999999999888765322 334444443 356443
No 102
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.50 E-value=1.2e-13 Score=114.73 Aligned_cols=103 Identities=23% Similarity=0.254 Sum_probs=84.7
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
..++++|||||||+|.+++.+++.|+ +|+++|.+++++.|++++..++. ..++++...|..+.. .
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~-----------~~~i~~~~~d~~~~~---~ 101 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGF-----------SDKITLLRGKLEDVH---L 101 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTSC---C
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCC-----------CCCEEEEECchhhcc---C
Confidence 34678999999999999999999887 69999997899999999988764 346888887776442 2
Q ss_pred cCCCccEEEEecccc---CCcChHHHHHHHHHhcCCCcEEE
Q 029065 119 VAPPFDYIIGTDVVY---AEHLLEPLLQTIFALSGPKTTIL 156 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~---~~~~~~~~l~~l~~~l~~~g~i~ 156 (199)
..++||+|++..+.+ +...+..++..+.++|+|||.++
T Consensus 102 ~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 102 PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 246899999986544 46678899999999999999886
No 103
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.50 E-value=1.1e-13 Score=108.44 Aligned_cols=128 Identities=17% Similarity=0.173 Sum_probs=89.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~ 116 (199)
++++|||||||+|..++.+++. +++|+++|++ .+++.|++++..++. ..++++...|..+.. ..
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~l~~~ 126 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----------QDKVTILNGASQDLIPQL 126 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEESCHHHHGGGT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----------CCceEEEECCHHHHHHHH
Confidence 5689999999999999999974 6789999995 599999999988764 236888887764321 11
Q ss_pred c--ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHh--CCeEEEe
Q 029065 117 K--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKS--NFNVKLV 183 (199)
Q Consensus 117 ~--~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~--~~~v~~~ 183 (199)
. ...++||+|++.....+......++..+ ++|+|||.+++........ ..|.+.+.. .|....+
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~--~~~~~~l~~~~~~~~~~~ 194 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGT--PDFLAYVRGSSSFECTHY 194 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCC--HHHHHHHHHCTTEEEEEE
T ss_pred HHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcch--HHHHHHHhhCCCceEEEc
Confidence 0 0126899999986554444444566666 9999999998877655432 344444432 3544443
No 104
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=6.9e-14 Score=112.02 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=80.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||+|..+..++..+.+|+++|++ .+++.|+++.. ++.+...|+.... . .
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~-----------------~~~~~~~d~~~~~---~-~ 108 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP-----------------DAVLHHGDMRDFS---L-G 108 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT-----------------TSEEEECCTTTCC---C-S
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC-----------------CCEEEECChHHCC---c-c
Confidence 46899999999999999999999999999995 49988887632 4677777775432 2 5
Q ss_pred CCccEEEEec-cccCC---cChHHHHHHHHHhcCCCcEEEEE
Q 029065 121 PPFDYIIGTD-VVYAE---HLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 121 ~~fD~Ii~~~-~~~~~---~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
+.||+|+++. ++.+. .....+++.+.++|+|||.+++.
T Consensus 109 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 7899999997 88776 47778899999999999999985
No 105
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.50 E-value=1e-13 Score=117.97 Aligned_cols=141 Identities=16% Similarity=0.169 Sum_probs=100.0
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhh-ccccCCCCCCCCCcEEEEEeeeCCCcc-c
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTS-RISQMNPGSDLLGSIQAVELDWGNEDH-I 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~d~~~~~~-~ 116 (199)
.++++|||+|||+|..++.++..|+ +|+++|++ .+++.|++|+..|+. . .++++...|...... .
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~-----------~~v~~~~~D~~~~~~~~ 287 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL-----------SKAEFVRDDVFKLLRTY 287 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG-----------GGEEEEESCHHHHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-----------cceEEEECCHHHHHHHH
Confidence 3678999999999999999999876 69999995 499999999998863 1 167888877653311 0
Q ss_pred cccCCCccEEEEeccccCC---------cChHHHHHHHHHhcCCCcEEEEEEEecChh--HHHHHH-HHH-HhCCeEEEe
Q 029065 117 KAVAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILLGYEIRSTS--VHEQML-QMW-KSNFNVKLV 183 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~---------~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~--~~~~~~-~~~-~~~~~v~~~ 183 (199)
.....+||+|+++++.+.. ..+..++..+.++|+|+|.++++....... .+.... +.+ ..++.++.+
T Consensus 288 ~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 288 RDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp HHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 0113589999999886543 467788999999999999999988765432 222222 233 345556555
Q ss_pred cCCCcCccc
Q 029065 184 PKAKESTMW 192 (199)
Q Consensus 184 ~~~~~~~~~ 192 (199)
.....+++|
T Consensus 368 ~~~~~~~d~ 376 (396)
T 3c0k_A 368 EQFRQAADH 376 (396)
T ss_dssp EEEECCTTS
T ss_pred EECCCCCCC
Confidence 554444433
No 106
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.49 E-value=2.1e-13 Score=109.64 Aligned_cols=109 Identities=12% Similarity=0.038 Sum_probs=87.1
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-C--CeEEEeechh-------HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEee-
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQIE-------VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELD- 109 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~~-------~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d- 109 (199)
.++.+|||||||+|..+..++.. | .+|+++|+++ +++.+++++..++. ..++++...|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~ 110 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----------GDRLTVHFNTN 110 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----------GGGEEEECSCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----------CCceEEEECCh
Confidence 36789999999999999999987 4 6899999943 89999998876643 2368888776
Q ss_pred eCCCccccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 110 WGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 110 ~~~~~~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
+... ..+...++||+|+++.++++..+...+++.+..+++|||.+++....
T Consensus 111 ~~~~-~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 111 LSDD-LGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp TTTC-CGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred hhhc-cCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 3221 22234578999999999999888888899999999999999998754
No 107
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=3.8e-13 Score=107.44 Aligned_cols=108 Identities=19% Similarity=0.138 Sum_probs=84.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++++|||||||+|..++.++.. +.+|+++|++ ++++.|++++...+. ..++++...|..+.....
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----------~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----------DQRVTLREGPALQSLESL 131 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHTC
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHhc
Confidence 5789999999999999999987 6789999995 599999999988764 347888887765321111
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
...++||+|++.. .......+++.+.++|+|||.+++......
T Consensus 132 ~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 132 GECPAFDLIFIDA---DKPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp CSCCCCSEEEECS---CGGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred CCCCCeEEEEECC---chHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 1134899999864 345677899999999999999888766543
No 108
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.49 E-value=1.6e-13 Score=107.23 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=73.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|..+..++... .+|+++|+++ +++.+.+.+... .++.+...|.........
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--------------~~v~~~~~d~~~~~~~~~ 122 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--------------NNIIPLLFDASKPWKYSG 122 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--------------SSEEEECSCTTCGGGTTT
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--------------CCeEEEEcCCCCchhhcc
Confidence 57899999999999999998764 5799999955 777666554332 146666655543211111
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
..+.||+|+++- ........+++.+.++|+|||.++++.+.
T Consensus 123 ~~~~fD~V~~~~--~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 123 IVEKVDLIYQDI--AQKNQIEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp TCCCEEEEEECC--CSTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cccceeEEEEec--cChhHHHHHHHHHHHHhCCCCEEEEEEec
Confidence 236899999872 22333445689999999999999998654
No 109
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.49 E-value=6.2e-14 Score=114.02 Aligned_cols=155 Identities=16% Similarity=0.130 Sum_probs=96.1
Q ss_pred CCCCCcEEEeCCCcChHHHHHHh-hCCeEEEeechh-HHHHHHHHHHHhh-----------h-ccccCCCC-C-----CC
Q 029065 40 KLKGKRVIELGAGCGVAGFGMAL-LGCNVITTDQIE-VLPLLKRNVEWNT-----------S-RISQMNPG-S-----DL 99 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~-~g~~v~~~D~~~-~l~~a~~~~~~~~-----------~-~~~~~~~~-~-----~~ 99 (199)
..++.+|||||||+|..++.++. .+.+|+++|+++ +++.|++++.... . .+....+. . -.
T Consensus 69 ~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 69 EVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 34778999999999996655554 367899999955 9999888653210 0 00000000 0 00
Q ss_pred CCcEEEEEeeeCCCccc---cccCCCccEEEEeccccC----CcChHHHHHHHHHhcCCCcEEEEEEEecC---------
Q 029065 100 LGSIQAVELDWGNEDHI---KAVAPPFDYIIGTDVVYA----EHLLEPLLQTIFALSGPKTTILLGYEIRS--------- 163 (199)
Q Consensus 100 ~~~i~~~~~d~~~~~~~---~~~~~~fD~Ii~~~~~~~----~~~~~~~l~~l~~~l~~~g~i~i~~~~~~--------- 163 (199)
...+++...|....... ....++||+|+++.++++ ..++..+++.+.++|+|||.+++......
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~ 228 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEAR 228 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCee
Confidence 00134555566542111 122456999999999988 55789999999999999999988743211
Q ss_pred ----hhHHHHHHHHHH-hCCeEEEecCCCcCcccCC
Q 029065 164 ----TSVHEQMLQMWK-SNFNVKLVPKAKESTMWGN 194 (199)
Q Consensus 164 ----~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 194 (199)
.-..+.+.+.+. .||++..+.....+..|.+
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~ 264 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYKVRDLRTYIMPAHLQT 264 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEEEEECCGGGCC
T ss_pred eeeccCCHHHHHHHHHHcCCeEEEeeEeeccccccc
Confidence 011344555553 5898877766555555544
No 110
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=1.2e-13 Score=111.89 Aligned_cols=102 Identities=16% Similarity=0.129 Sum_probs=84.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC--eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC--NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.++.+|||+|||+|.+++.+++.+. +|+++|++ .+++.|++|+..|+. .++.+...|..+. .
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l------------~~~~~~~~d~~~~-~-- 182 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL------------NNVIPILADNRDV-E-- 182 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC------------SSEEEEESCGGGC-C--
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CCEEEEECChHHc-C--
Confidence 3578999999999999999998854 79999995 599999999999873 4677888777543 1
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||+|+++++. ....++..+.+.|+|||.++++....
T Consensus 183 -~~~~~D~Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 183 -LKDVADRVIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp -CTTCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -ccCCceEEEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 15689999998774 67788999999999999999887765
No 111
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.49 E-value=5.8e-14 Score=108.47 Aligned_cols=105 Identities=16% Similarity=0.225 Sum_probs=83.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||+|||+|..+..++..|. +|+++|+++ +++.++++... ..++++...|+... ..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--------------~~~i~~~~~d~~~~---~~ 103 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--------------VPQLRWETMDVRKL---DF 103 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--------------CTTCEEEECCTTSC---CS
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--------------CCCcEEEEcchhcC---CC
Confidence 4578999999999999999999887 799999955 99999887542 13677888776543 23
Q ss_pred cCCCccEEEEeccccCC---------------cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYAE---------------HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~---------------~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||+|+++.++.+. .....+++.+.++|+|||.+++.....
T Consensus 104 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 104 PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 35689999998887432 356889999999999999999888754
No 112
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=9.2e-14 Score=110.41 Aligned_cols=103 Identities=19% Similarity=0.258 Sum_probs=82.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++..|.+|+++|++ .+++.+++++..++. ++.+...|+.... ..
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-------------~v~~~~~d~~~~~----~~ 103 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL-------------KIEFLQGDVLEIA----FK 103 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------------CCEEEESCGGGCC----CC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC-------------ceEEEECChhhcc----cC
Confidence 46799999999999999999999999999995 499999998876642 5778887775432 23
Q ss_pred CCccEEEEec-ccc--CCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 121 PPFDYIIGTD-VVY--AEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 121 ~~fD~Ii~~~-~~~--~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
++||+|++.. .+. .......+++.+.++|+|||.+++..+.
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 6899999752 222 2356789999999999999999887654
No 113
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.49 E-value=1.9e-13 Score=105.74 Aligned_cols=100 Identities=20% Similarity=0.148 Sum_probs=81.7
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..+++.+.+|+++|++ .+++.+++++..++ ..++++...|+.... ..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~------------~~~v~~~~~d~~~~~---~~ 140 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLD------------LHNVSTRHGDGWQGW---QA 140 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTT------------CCSEEEEESCGGGCC---GG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcC------------CCceEEEECCcccCC---cc
Confidence 357899999999999999999999999999995 59999999998775 336888887775432 22
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.++||+|+++..+.+... .+.++|+|||.+++..+.
T Consensus 141 ~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 568999999987766443 578999999999998775
No 114
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.49 E-value=1.1e-14 Score=115.24 Aligned_cols=102 Identities=18% Similarity=0.077 Sum_probs=84.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..++.++..|.+|+++|+++ +++.|++++..++. ..++++...|+.+.. ..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~----~~ 142 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGI-----------ADKIEFICGDFLLLA----SF 142 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHG----GG
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC-----------CcCeEEEECChHHhc----cc
Confidence 688999999999999999999999999999955 99999999988763 237888888875432 35
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
+.||+|++++++.+.......+..+.++|+|||.+++.
T Consensus 143 ~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 143 LKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 68999999999888777666777788889999875543
No 115
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=4.6e-14 Score=111.56 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=78.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|..+..++..+. +|+++|+++ +++.|+++...++ .++++...|+.+.. .+..
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-------------~~v~~~~~d~~~~~-~~~~ 125 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-------------HKVIPLKGLWEDVA-PTLP 125 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-------------SEEEEEESCHHHHG-GGSC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-------------CCeEEEecCHHHhh-cccC
Confidence 567999999999999999988766 699999955 9999998765542 36788887775321 1233
Q ss_pred CCCccEEEE-eccc----cCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 APPFDYIIG-TDVV----YAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 ~~~fD~Ii~-~~~~----~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
+++||+|++ ...+ .+......+++.+.++|+|||.+++...
T Consensus 126 ~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 578999999 3222 1233455779999999999999887653
No 116
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=7.1e-14 Score=112.16 Aligned_cols=99 Identities=18% Similarity=0.063 Sum_probs=81.2
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||||||+|..+..++..+++|+++|+++ +++.++.+. ++++...|+... +..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------~~~~~~~d~~~~---~~~ 91 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP------------------QVEWFTGYAENL---ALP 91 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT------------------TEEEECCCTTSC---CSC
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc------------------CCEEEECchhhC---CCC
Confidence 3578999999999999999999999999999955 766554332 567777776533 234
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.++||+|++..++++..++..+++.+.++|+ ||.+++....
T Consensus 92 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 92 DKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 5789999999999999999999999999999 9977777654
No 117
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.48 E-value=1.8e-13 Score=107.49 Aligned_cols=116 Identities=16% Similarity=0.191 Sum_probs=85.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc-
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV- 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~- 119 (199)
++.+|||+|||+|..+..++..+++|+++|+++ +++.++++ . .++++...|+... .+..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------------~~~~~~~~d~~~~--~~~~~ 108 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---A--------------PHADVYEWNGKGE--LPAGL 108 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---C--------------TTSEEEECCSCSS--CCTTC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---C--------------CCceEEEcchhhc--cCCcC
Confidence 578999999999999999999999999999954 99999887 1 1568888887532 2233
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCCeEEEecC
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNFNVKLVPK 185 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 185 (199)
.++||+|+++ .+...+++.+.++|+|||.++........ +.+.+.+ ..+|.+..+..
T Consensus 109 ~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 109 GAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYVGPRLNV---PEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp CCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEESSSCC---THHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeCCcCCH---HHHHHHHHHCCCeEEEEEe
Confidence 5789999998 46788999999999999998832222222 2333444 34677655443
No 118
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.48 E-value=1.8e-13 Score=112.60 Aligned_cols=115 Identities=10% Similarity=0.011 Sum_probs=78.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc---cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED---HI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~ 116 (199)
.+.+|||||||+|.....++.. +++|+|+|+++ +++.|++.....+.... ...-.+++...+..... .+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~------~~~~~~~f~~~d~~~d~~~~~l 121 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIK------TKYYKFDYIQETIRSDTFVSSV 121 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----------CCCEEEEEECCTTSSSHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcccccc------ccccccchhhhhcccchhhhhh
Confidence 4789999999999655444444 57899999965 99999997765431000 00002455555542221 01
Q ss_pred --cccCCCccEEEEeccccC---CcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 117 --KAVAPPFDYIIGTDVVYA---EHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 117 --~~~~~~fD~Ii~~~~~~~---~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
....++||+|++..++++ ......+++.+.++|+|||.++++.+.+
T Consensus 122 ~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 122 REVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp HTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 123568999999887753 3567899999999999999999988754
No 119
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.48 E-value=1.4e-13 Score=112.22 Aligned_cols=107 Identities=13% Similarity=0.194 Sum_probs=76.5
Q ss_pred CCCcEEEeCCCcChHHHHHH----hh--CCeE--EEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEE--Eeee
Q 029065 42 KGKRVIELGAGCGVAGFGMA----LL--GCNV--ITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV--ELDW 110 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la----~~--g~~v--~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~d~ 110 (199)
++.+|||||||+|..+..++ .. +..| +++|.++ |++.+++++.... ...++.+. ..+.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-----------~~~~v~~~~~~~~~ 120 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-----------NLENVKFAWHKETS 120 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-----------SCTTEEEEEECSCH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-----------CCCcceEEEEecch
Confidence 45799999999997664332 22 3434 9999955 9999998875421 02244432 2221
Q ss_pred CCCcccc------ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 111 GNEDHIK------AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 111 ~~~~~~~------~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
. ... ...++||+|+++.++++..++..+++.+.++|+|||.+++.....
T Consensus 121 ~---~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 121 S---EYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp H---HHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred h---hhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 1 111 135789999999999999999999999999999999999886543
No 120
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.48 E-value=4.8e-13 Score=109.46 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=81.7
Q ss_pred CCCCcEEEeCCCcCh-HHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELGAGCGV-AGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~-~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
-++.+|||||||+|. .++.+|+ .|++|+++|++ ++++.|++++...+ ..++++...|..+.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g------------l~~v~~v~gDa~~l---- 184 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG------------VDGVNVITGDETVI---- 184 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT------------CCSEEEEESCGGGG----
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC------------CCCeEEEECchhhC----
Confidence 467899999999974 4566776 58899999995 59999999998775 24788888776532
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
..+.||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 185 -~d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 185 -DGLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp -GGCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred -CCCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 2578999998654 478889999999999999999887643
No 121
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.48 E-value=1.5e-13 Score=115.16 Aligned_cols=105 Identities=16% Similarity=0.186 Sum_probs=84.9
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
..++++|||||||+|.+++.+++.|+ +|+++|.+++++.|++++..++. ..++++...|+.+..
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l-----------~~~v~~~~~d~~~~~---- 112 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL-----------TDRIVVIPGKVEEVS---- 112 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC----
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcchhhCC----
Confidence 45788999999999999999999876 79999997788899998888763 357899888876442
Q ss_pred cCCCccEEEEeccccC--CcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 119 VAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~--~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
..++||+|++..++++ .......+..+.++|+|||.+++..
T Consensus 113 ~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 113 LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 1358999999988776 3455677778889999999987654
No 122
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.47 E-value=4.8e-13 Score=104.56 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=83.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-c
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-I 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~ 116 (199)
++++|||||||+|..++.++.. +++|+++|++ ++++.+++++...+. ..++++...|...... .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----------NDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHHH
Confidence 5789999999999999999987 6789999994 599999999988763 3468888877743211 1
Q ss_pred ccc-CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 117 KAV-APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 117 ~~~-~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
... .++||+|++... ......+++.+.++|+|||.+++......
T Consensus 127 ~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 127 ENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 111 157999998754 45678899999999999998887765543
No 123
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.47 E-value=6.2e-13 Score=105.47 Aligned_cols=127 Identities=15% Similarity=0.145 Sum_probs=93.7
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhh-C--CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.-+|.+|||||||+|..+..+|+. | .+|+++|++ ++++.+++++... .++.....|......
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--------------~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--------------RNIFPILGDARFPEK 140 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--------------TTEEEEESCTTCGGG
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--------------cCeeEEEEeccCccc
Confidence 346889999999999999999976 5 469999995 5999887775433 367777777766655
Q ss_pred ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChh-------HHHHHHHHH-HhCCeEEE
Q 029065 116 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTS-------VHEQMLQMW-KSNFNVKL 182 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~-------~~~~~~~~~-~~~~~v~~ 182 (199)
.......+|+|++. +.+......++..+.+.|||||.++++...+..+ .+....+.+ ..+|++.+
T Consensus 141 ~~~~~~~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e 213 (233)
T 4df3_A 141 YRHLVEGVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKD 213 (233)
T ss_dssp GTTTCCCEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEE
T ss_pred cccccceEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEE
Confidence 55556789998863 3455677889999999999999999988766533 233333444 35898754
No 124
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.46 E-value=1.3e-13 Score=110.55 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=80.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||+|..+..++..|.+|+++|+++ +++.++++.. . . +...|.... +...
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~-~---------------~--~~~~d~~~~---~~~~ 112 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV-K---------------N--VVEAKAEDL---PFPS 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC-S---------------C--EEECCTTSC---CSCT
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC-C---------------C--EEECcHHHC---CCCC
Confidence 678999999999999999999999999999954 9888877632 0 1 445555432 2335
Q ss_pred CCccEEEEeccccC-CcChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 121 PPFDYIIGTDVVYA-EHLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~-~~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
+.||+|++..++++ ..+...+++.+.++|+|||.+++..+...
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 78999999876654 46799999999999999999999887653
No 125
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.46 E-value=3.2e-13 Score=106.69 Aligned_cols=102 Identities=13% Similarity=0.155 Sum_probs=82.6
Q ss_pred CCCcEEEeCCCcChHHHHHHh--hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc-
Q 029065 42 KGKRVIELGAGCGVAGFGMAL--LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK- 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~--~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~- 117 (199)
++++|||||||+|..++.++. .+.+|+++|++ ++++.|++++...+. ..++++...|.... ..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~~~ 137 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF-----------ENQVRIIEGNALEQ--FEN 137 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC-----------TTTEEEEESCGGGC--HHH
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECCHHHH--HHh
Confidence 578999999999999999998 46789999995 599999999988763 24789988887533 22
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
...++||+|++... ......+++.+.++|+|||.+++..
T Consensus 138 ~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 138 VNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp HTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 22578999997643 5678889999999999999987744
No 126
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.46 E-value=4.3e-13 Score=104.85 Aligned_cols=107 Identities=19% Similarity=0.084 Sum_probs=83.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++++|||||||+|..++.++.. +.+|+++|++ ++++.+++++..++. ..++++...|........
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----------SDKIGLRLSPAKDTLAEL 132 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----------CCceEEEeCCHHHHHHHh
Confidence 5789999999999999999986 6789999995 599999999988763 346888887764321110
Q ss_pred cc---CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 118 AV---APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 118 ~~---~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.. .++||+|++... ......+++.+.++|+|||.+++.....
T Consensus 133 ~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred hhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 10 168999997653 4567889999999999999998876553
No 127
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.46 E-value=2.1e-13 Score=111.33 Aligned_cols=106 Identities=15% Similarity=0.187 Sum_probs=83.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|.+++.++.. +++|+++|++ .+++.|++|+..++. ..++++.+.|+....
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l-----------~~~v~~~~~D~~~~~----- 186 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV-----------SDRFFVRKGEFLEPF----- 186 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC-----------TTSEEEEESSTTGGG-----
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCceEEEECcchhhc-----
Confidence 4579999999999999999988 7789999995 499999999988864 235899998886421
Q ss_pred CCCc---cEEEEeccccCCc-------------------ChHHHHHHHH-HhcCCCcEEEEEEEecC
Q 029065 120 APPF---DYIIGTDVVYAEH-------------------LLEPLLQTIF-ALSGPKTTILLGYEIRS 163 (199)
Q Consensus 120 ~~~f---D~Ii~~~~~~~~~-------------------~~~~~l~~l~-~~l~~~g~i~i~~~~~~ 163 (199)
.++| |+|++++++.... +...+++.+. +.++|||.+++......
T Consensus 187 ~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 187 KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQ 253 (284)
T ss_dssp GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTC
T ss_pred ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchH
Confidence 2468 9999997765321 1127889999 99999999998665443
No 128
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.45 E-value=3.2e-13 Score=106.41 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=81.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..+..++.. .+|+++|++ .+++.+++++..++ .++++...|+.... ..
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~-------------~~~~~~~~d~~~~~----~~ 94 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN-------------RHVDFWVQDMRELE----LP 94 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT-------------CCCEEEECCGGGCC----CS
T ss_pred CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC-------------CceEEEEcChhhcC----CC
Confidence 3589999999999999999988 889999995 49999999887653 25677777765332 13
Q ss_pred CCccEEEEec-cccCC---cChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 121 PPFDYIIGTD-VVYAE---HLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 121 ~~fD~Ii~~~-~~~~~---~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
+.||+|++.. ++.+. .....+++.+.++|+|||.+++..+
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 6899999975 77765 5678899999999999999988543
No 129
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.45 E-value=3.6e-13 Score=109.02 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=91.3
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHh-hhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++.+|||+|||+|..++.++.. +.+|+++|++ .+++.+++++..+ + ..++++...|+...
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g------------~~~v~~~~~d~~~~-- 174 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD------------IGNVRTSRSDIADF-- 174 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC------------CTTEEEECSCTTTC--
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC------------CCcEEEEECchhcc--
Confidence 35789999999999999999987 6789999995 5999999998776 5 24688888777542
Q ss_pred ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEe
Q 029065 116 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLV 183 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~ 183 (199)
...+.||+|+++ ......+++.+.++|+|||.+++..+.... .+.+.+.+. .+|....+
T Consensus 175 --~~~~~fD~Vi~~-----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~--~~~~~~~l~~~Gf~~~~~ 234 (275)
T 1yb2_A 175 --ISDQMYDAVIAD-----IPDPWNHVQKIASMMKPGSVATFYLPNFDQ--SEKTVLSLSASGMHHLET 234 (275)
T ss_dssp --CCSCCEEEEEEC-----CSCGGGSHHHHHHTEEEEEEEEEEESSHHH--HHHHHHHSGGGTEEEEEE
T ss_pred --CcCCCccEEEEc-----CcCHHHHHHHHHHHcCCCCEEEEEeCCHHH--HHHHHHHHHHCCCeEEEE
Confidence 224689999983 346779999999999999999998875422 344545543 46765443
No 130
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.45 E-value=1.1e-13 Score=113.54 Aligned_cols=106 Identities=15% Similarity=0.104 Sum_probs=85.4
Q ss_pred CCCCcEEEeCCCcChHHHHHH--h-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMA--L-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la--~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++.+|||||||+|..++.++ . .+.+|+++|++ .+++.+++++...+. ..++++...|+.+..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~-- 183 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL-----------AGQITLHRQDAWKLD-- 183 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-----------GGGEEEEECCGGGCC--
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEECchhcCC--
Confidence 357899999999999999885 2 26689999995 499999999876653 235899988876432
Q ss_pred cccCCCccEEEEeccccCCcChHH---HHHHHHHhcCCCcEEEEEEEe
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEP---LLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~---~l~~l~~~l~~~g~i~i~~~~ 161 (199)
. .+.||+|+++.++++..+... +++.+.++|+|||.++++...
T Consensus 184 -~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 184 -T-REGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp -C-CSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -c-cCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 2 278999999999988766655 799999999999999998743
No 131
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.45 E-value=2.1e-13 Score=108.68 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=80.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh----CCeEEEeechh-HHHHHHHHHHHh---hhcccc----------CCCC----CCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALL----GCNVITTDQIE-VLPLLKRNVEWN---TSRISQ----------MNPG----SDL 99 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~----g~~v~~~D~~~-~l~~a~~~~~~~---~~~~~~----------~~~~----~~~ 99 (199)
++.+|||+|||+|..++.++.. +.+|+++|+++ +++.|++++..+ +..... ..+. ...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4679999999999999999976 56799999954 999999988765 321000 0000 000
Q ss_pred CCcEE-------------EEEeeeCCCcccc--ccCCCccEEEEeccccCCcC---------hHHHHHHHHHhcCCCcEE
Q 029065 100 LGSIQ-------------AVELDWGNEDHIK--AVAPPFDYIIGTDVVYAEHL---------LEPLLQTIFALSGPKTTI 155 (199)
Q Consensus 100 ~~~i~-------------~~~~d~~~~~~~~--~~~~~fD~Ii~~~~~~~~~~---------~~~~l~~l~~~l~~~g~i 155 (199)
..+++ +.+.|+....... ....+||+|++++++..... ...+++.+.++|+|||.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 00034 7777765421100 02348999999988755333 458999999999999999
Q ss_pred EEEEEe
Q 029065 156 LLGYEI 161 (199)
Q Consensus 156 ~i~~~~ 161 (199)
+++...
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 985443
No 132
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.45 E-value=6.5e-14 Score=111.16 Aligned_cols=105 Identities=18% Similarity=0.175 Sum_probs=79.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhC-CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLG-CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g-~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+|.+|||||||+|..+..+++.+ ++|+++|++ .+++.|+++....+ .++.+...++.... ...
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~-------------~~~~~~~~~a~~~~-~~~ 124 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-------------HKVIPLKGLWEDVA-PTL 124 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS-------------SEEEEEESCHHHHG-GGS
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC-------------CceEEEeehHHhhc-ccc
Confidence 367899999999999999998764 569999995 59999999876553 35677777764322 123
Q ss_pred cCCCccEEEEecc-----ccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 119 VAPPFDYIIGTDV-----VYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 119 ~~~~fD~Ii~~~~-----~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.+++||.|+.... ..+..+...+++.+.++|||||.+.+..
T Consensus 125 ~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 125 PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 4578999976433 3445568889999999999999987754
No 133
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.45 E-value=3e-13 Score=114.64 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=98.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-cccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~ 119 (199)
++++|||+|||+|..++.++..+.+|+++|++ .+++.|++|+..|+. .++++...|...... ....
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~------------~~~~~~~~d~~~~~~~~~~~ 276 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGL------------GNVRVLEANAFDLLRRLEKE 276 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTC------------TTEEEEESCHHHHHHHHHHT
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC------------CCceEEECCHHHHHHHHHhc
Confidence 57899999999999999999886679999995 499999999999874 347888877643211 0011
Q ss_pred CCCccEEEEeccccCC---------cChHHHHHHHHHhcCCCcEEEEEEEecChh--HHHH-HHHHH-HhCCeEEEecCC
Q 029065 120 APPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILLGYEIRSTS--VHEQ-MLQMW-KSNFNVKLVPKA 186 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~---------~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~--~~~~-~~~~~-~~~~~v~~~~~~ 186 (199)
..+||+|+++++.+.. .....++..+.++|+|||.++++....... .+.. +.+.+ ..+..++.+...
T Consensus 277 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~ 356 (382)
T 1wxx_A 277 GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKR 356 (382)
T ss_dssp TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEcC
Confidence 4689999998876553 346778889999999999999988764332 1222 22233 234556666555
Q ss_pred CcCccc
Q 029065 187 KESTMW 192 (199)
Q Consensus 187 ~~~~~~ 192 (199)
..++.+
T Consensus 357 ~~~~d~ 362 (382)
T 1wxx_A 357 GQPFDH 362 (382)
T ss_dssp CCCTTS
T ss_pred CCCCCC
Confidence 555444
No 134
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.45 E-value=1e-12 Score=103.75 Aligned_cols=120 Identities=14% Similarity=0.113 Sum_probs=87.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC--eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
+|.+|||+|||+|.+++.+++.+. +|+++|+++ +++.|++|+..+++ ..++++...|+.... .
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----------~~~i~~~~~d~l~~l--~- 80 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL-----------KEKIQVRLANGLAAF--E- 80 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----------TTTEEEEECSGGGGC--C-
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CceEEEEECchhhhc--c-
Confidence 567999999999999999999874 599999955 99999999999975 347899888874321 1
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeE
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v 180 (199)
...+||+|+.++.. ...+..++......|+++|.+++... ........++. ..+|.+
T Consensus 81 ~~~~~D~IviaG~G--g~~i~~Il~~~~~~L~~~~~lVlq~~-~~~~~vr~~L~--~~Gf~i 137 (225)
T 3kr9_A 81 ETDQVSVITIAGMG--GRLIARILEEGLGKLANVERLILQPN-NREDDLRIWLQ--DHGFQI 137 (225)
T ss_dssp GGGCCCEEEEEEEC--HHHHHHHHHHTGGGCTTCCEEEEEES-SCHHHHHHHHH--HTTEEE
T ss_pred cCcCCCEEEEcCCC--hHHHHHHHHHHHHHhCCCCEEEEECC-CCHHHHHHHHH--HCCCEE
Confidence 11269999876542 23478889999999999998777544 33333333333 345655
No 135
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.45 E-value=2.3e-13 Score=113.73 Aligned_cols=103 Identities=15% Similarity=0.128 Sum_probs=82.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+.+|||+|||+|.+++.+++.+ .+|+++|+++ +++.+++++..++. .+++...|....
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-------------~~~~~~~d~~~~----- 257 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-------------EGEVFASNVFSE----- 257 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-------------CCEEEECSTTTT-----
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-------------CCEEEEcccccc-----
Confidence 35699999999999999999886 4799999955 99999999988753 245555555322
Q ss_pred cCCCccEEEEeccccC-----CcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYA-----EHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~-----~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||+|++++++++ ......+++.+.++|+|||.+++.....
T Consensus 258 ~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 258 VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 2568999999998764 3457889999999999999999987653
No 136
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.45 E-value=6.1e-13 Score=104.86 Aligned_cols=104 Identities=14% Similarity=0.080 Sum_probs=79.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.+.+|||+|||+|..+..++.. | .+|+++|+++ +++.+.+++..+. ++++...|........
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~--------------~v~~~~~d~~~~~~~~ 142 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRT--------------NIIPVIEDARHPHKYR 142 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCT--------------TEEEECSCTTCGGGGG
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccC--------------CeEEEEcccCChhhhc
Confidence 5789999999999999999976 3 6799999954 7777777765542 6788887776543233
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...+.||+|+++.+ .......++..+.++|+|||.++++...
T Consensus 143 ~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 143 MLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp GGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 34578999999655 3333456688899999999999997664
No 137
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=4.1e-13 Score=114.22 Aligned_cols=138 Identities=13% Similarity=0.123 Sum_probs=98.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-ccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~ 118 (199)
++++|||+|||+|..++.++..|+ +|+++|++ .+++.|++|+..|+.. .++++...|..+... ...
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~-----------~~v~~~~~d~~~~~~~~~~ 285 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE-----------DRMKFIVGSAFEEMEKLQK 285 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG-----------GGEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----------ccceEEECCHHHHHHHHHh
Confidence 678999999999999999999876 69999995 4999999999988741 268888877653211 111
Q ss_pred cCCCccEEEEeccccCC---------cChHHHHHHHHHhcCCCcEEEEEEEecChh--HHHHH-HHHHH-hCCeEEEec-
Q 029065 119 VAPPFDYIIGTDVVYAE---------HLLEPLLQTIFALSGPKTTILLGYEIRSTS--VHEQM-LQMWK-SNFNVKLVP- 184 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~---------~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~--~~~~~-~~~~~-~~~~v~~~~- 184 (199)
...+||+|+++++.+.. .....++..+.++|+|||.++++....... .+... .+.+. .+..+..+.
T Consensus 286 ~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~ 365 (396)
T 2as0_A 286 KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLEP 365 (396)
T ss_dssp TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESSC
T ss_pred hCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEec
Confidence 14689999998887653 346778888999999999988887654332 12222 22332 355666666
Q ss_pred CCCcCc
Q 029065 185 KAKEST 190 (199)
Q Consensus 185 ~~~~~~ 190 (199)
....++
T Consensus 366 ~~~~~~ 371 (396)
T 2as0_A 366 YRTQAP 371 (396)
T ss_dssp BBCSCT
T ss_pred cCCCCC
Confidence 444443
No 138
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.44 E-value=1.6e-12 Score=102.88 Aligned_cols=120 Identities=15% Similarity=0.111 Sum_probs=88.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC--eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
+|.+|||+|||+|.+++.+++.|. +|+++|+++ +++.|++|+..+++ ..++++...|+.... .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl-----------~~~I~~~~gD~l~~~---~ 86 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL-----------TSKIDVRLANGLSAF---E 86 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC-----------TTTEEEEECSGGGGC---C
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECchhhcc---c
Confidence 567999999999999999999874 599999955 99999999999975 347999988875332 1
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeE
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v 180 (199)
...+||+|+.++... ..+..++......|+++|.++++... ..+....++.. .+|.+
T Consensus 87 ~~~~~D~IviaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~~-~~~~lr~~L~~--~Gf~i 143 (230)
T 3lec_A 87 EADNIDTITICGMGG--RLIADILNNDIDKLQHVKTLVLQPNN-REDDLRKWLAA--NDFEI 143 (230)
T ss_dssp GGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHH--TTEEE
T ss_pred cccccCEEEEeCCch--HHHHHHHHHHHHHhCcCCEEEEECCC-ChHHHHHHHHH--CCCEE
Confidence 123799988765432 45778888888889999987776643 33333333333 45655
No 139
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.44 E-value=4.6e-13 Score=110.10 Aligned_cols=116 Identities=16% Similarity=0.062 Sum_probs=85.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc---c
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH---I 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~ 116 (199)
++.+|||||||+|..+..++.. +.+|+++|+++ +++.++++....+... ......++.+...|...... .
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~ 108 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRR-----DSEYIFSAEFITADSSKELLIDKF 108 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSS-----CC-CCCEEEEEECCTTTSCSTTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcc-----cccccceEEEEEecccccchhhhc
Confidence 5679999999999988888865 56799999955 9999998876543100 00013367888888765431 1
Q ss_pred cccCCCccEEEEeccccCC----cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 117 KAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~----~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
....++||+|+++.++++. .....++..+.++|+|||.++++.+..
T Consensus 109 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 109 RDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp SSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 1123589999999988765 346799999999999999999988754
No 140
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.44 E-value=4e-13 Score=104.63 Aligned_cols=101 Identities=18% Similarity=0.145 Sum_probs=81.1
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..|.+|+++|+++ +++.++++. .++...|+.... .+..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-------------------~~~~~~d~~~~~-~~~~ 90 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-------------------DHVVLGDIETMD-MPYE 90 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-------------------SEEEESCTTTCC-CCSC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-------------------CcEEEcchhhcC-CCCC
Confidence 3578999999999999999998888899999955 877776542 144555554321 2223
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.+.||+|+++.++++..+...++..+.++|+|||.+++..+.
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 468999999999999989999999999999999999998875
No 141
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.43 E-value=9.4e-13 Score=103.75 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=75.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C-CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G-CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g-~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~ 117 (199)
++.+|||+|||+|..++.++.. | .+|+++|+++ +++.+++++..+ .++.+...|...... ..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------~~v~~~~~d~~~~~~~~~ 139 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--------------ENIIPILGDANKPQEYAN 139 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--------------TTEEEEECCTTCGGGGTT
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--------------CCeEEEECCCCCcccccc
Confidence 5789999999999999999987 4 6799999954 999998876443 367887777754221 11
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
. .+.||+|+.. + ........++..+.++|+|||.++++..
T Consensus 140 ~-~~~~D~v~~~-~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 179 (230)
T 1fbn_A 140 I-VEKVDVIYED-V-AQPNQAEILIKNAKWFLKKGGYGMIAIK 179 (230)
T ss_dssp T-SCCEEEEEEC-C-CSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-CccEEEEEEe-c-CChhHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 2 2689999932 1 1222337889999999999999999744
No 142
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.43 E-value=2.1e-12 Score=106.81 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=87.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|..+..++.. +.+|+++|++.+++.+++++...+. ..++++...|+.... .
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~---~- 229 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGV-----------ASRYHTIAGSAFEVD---Y- 229 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTC-----------GGGEEEEESCTTTSC---C-
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCC-----------CcceEEEecccccCC---C-
Confidence 4679999999999999999977 6689999999999999999877653 236899888876431 1
Q ss_pred CCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
...||+|++..++++. .....+++.+.++|+|||.+++.+...
T Consensus 230 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 230 GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 2349999999999886 456899999999999999999887654
No 143
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.42 E-value=1.7e-13 Score=107.65 Aligned_cols=128 Identities=11% Similarity=0.095 Sum_probs=89.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..+.+|+++|++ .+++.+++++..++ ++++...|.... . ..
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~--------------~v~~~~~d~~~~--~-~~ 131 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN--------------NIKLILGDGTLG--Y-EE 131 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS--------------SEEEEESCGGGC--C-GG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC--------------CeEEEECCcccc--c-cc
Confidence 357799999999999999999999899999995 49999988875442 577887776532 1 12
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeEEEecCCCcCccc
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNVKLVPKAKESTMW 192 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 192 (199)
.++||+|+++.++++.. ..+.++|+|||.+++..+.........+.. ....|+...+......+.+
T Consensus 132 ~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 197 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVGRVQKLYKVIK-KGNSPSLENLGEVMFGRIG 197 (231)
T ss_dssp GCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSSSSEEEEEEEC-CTTSCEEEEEEEECCCBCC
T ss_pred CCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCCCccEEEEEEE-cCCeeEEEEeccEEEEEcC
Confidence 46899999998887643 468889999999999876543211111111 1234666555554444433
No 144
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.42 E-value=4.2e-13 Score=105.60 Aligned_cols=102 Identities=11% Similarity=0.076 Sum_probs=79.9
Q ss_pred CcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 44 KRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+|||||||+|..++.+++. +++|+++|++ ++++.|++++..++.. ..++++...|..+. ....
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----------~~~i~~~~gda~~~--l~~~ 125 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS----------PSRVRFLLSRPLDV--MSRL 125 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC----------GGGEEEECSCHHHH--GGGS
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----------cCcEEEEEcCHHHH--HHHh
Confidence 39999999999999999974 6789999995 5999999999887631 13788888765432 1122
Q ss_pred -CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 -APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 -~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
.++||+|++... ......+++.+.++|+|||.+++...
T Consensus 126 ~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 126 ANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp CTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred cCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 578999998643 45677899999999999999888543
No 145
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.42 E-value=4.3e-12 Score=106.90 Aligned_cols=106 Identities=12% Similarity=0.060 Sum_probs=87.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+.+|||+|||+|..+..+++. +.+++++|++.+++.+++++...+. ..++++...|+... .
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l-----------~~~v~~~~~d~~~~--~--- 265 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGL-----------ADRCEILPGDFFET--I--- 265 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTTC--C---
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCc-----------CCceEEeccCCCCC--C---
Confidence 4579999999999999999987 4579999996699999998877653 35799999887621 1
Q ss_pred CCCccEEEEeccccCCcChH--HHHHHHHHhcCCCcEEEEEEEecC
Q 029065 120 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~--~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
...||+|++..++++..+.. .+++.+.+.|+|||.++|.+....
T Consensus 266 p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 266 PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 12799999999998766554 899999999999999999887543
No 146
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.42 E-value=2.6e-12 Score=102.46 Aligned_cols=120 Identities=13% Similarity=0.056 Sum_probs=87.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC--eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|.+++.+++.+. +|+++|+++ +++.|++|+..+++ ..++++...|+.... .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----------~~~I~v~~gD~l~~~---~ 86 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL-----------TEQIDVRKGNGLAVI---E 86 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----------TTTEEEEECSGGGGC---C
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CceEEEEecchhhcc---C
Confidence 567999999999999999999874 599999955 99999999999975 346898888765332 1
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeE
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v 180 (199)
...+||+|+.+...- ..+..++......|++++.++++... .......++.. .+|.+
T Consensus 87 ~~~~~D~IviagmGg--~lI~~IL~~~~~~L~~~~~lIlq~~~-~~~~lr~~L~~--~Gf~i 143 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGG--TLIRTILEEGAAKLAGVTKLILQPNI-AAWQLREWSEQ--NNWLI 143 (244)
T ss_dssp GGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHH--HTEEE
T ss_pred ccccccEEEEeCCch--HHHHHHHHHHHHHhCCCCEEEEEcCC-ChHHHHHHHHH--CCCEE
Confidence 123699988765422 45778888888889998887776543 33333333333 45655
No 147
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.42 E-value=2.2e-13 Score=115.80 Aligned_cols=146 Identities=13% Similarity=0.100 Sum_probs=101.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-CCe-EEEeechh-HHHHHHHHHHH-------hhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-GCN-VITTDQIE-VLPLLKRNVEW-------NTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g~~-v~~~D~~~-~l~~a~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
++.+|||||||+|.+++.+|.. ++. |+|+|+++ +++.|++++.. ++.. ..++++.+.|+.
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~----------~~rVefi~GD~~ 242 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK----------HAEYTLERGDFL 242 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC----------CCEEEEEECCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC----------CCCeEEEECccc
Confidence 5789999999999999999854 665 99999954 99999887532 2210 247899998876
Q ss_pred CCccccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHH--HHHHHHHHhCCeEEEecCCCcC
Q 029065 112 NEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVH--EQMLQMWKSNFNVKLVPKAKES 189 (199)
Q Consensus 112 ~~~~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~ 189 (199)
+.... ..-..||+|+++.++ +..+....+..+.+.|+|||.+++.......+.- .+-+.....-+++++...-...
T Consensus 243 ~lp~~-d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~i~~rnl~di~~il~v~el~~~~~s 320 (438)
T 3uwp_A 243 SEEWR-ERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPLNFRINSRNLSDIGTIMRVVELSPLKGS 320 (438)
T ss_dssp SHHHH-HHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCTTCCCCSSSTTSGGGSEEEEECCCCTTC
T ss_pred CCccc-cccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCCCCCCCcccccChhhhheeeeccCCCCc
Confidence 44211 001479999998765 4567777788889999999999988776554321 1111223445777777666555
Q ss_pred cccCCCCCCC
Q 029065 190 TMWGNPLGLY 199 (199)
Q Consensus 190 ~~~~~~~~~~ 199 (199)
-.|-...|.|
T Consensus 321 VSWT~~~g~y 330 (438)
T 3uwp_A 321 VSWTGKPVSY 330 (438)
T ss_dssp CCTTSSCCCC
T ss_pred eeeccCCccE
Confidence 5777777766
No 148
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.42 E-value=9.7e-13 Score=103.13 Aligned_cols=104 Identities=18% Similarity=0.160 Sum_probs=78.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|..++.++.. | .+|+++|+++ +++.+++++..+ .++++...|........
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--------------~~v~~~~~d~~~~~~~~ 138 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--------------RNIVPILGDATKPEEYR 138 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--------------TTEEEEECCTTCGGGGT
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--------------CCCEEEEccCCCcchhh
Confidence 5779999999999999999976 4 6799999954 888888876543 26788888876532222
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...+.||+|+++.+ .......++..+.++|+|||.+++....
T Consensus 139 ~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 180 (227)
T 1g8a_A 139 ALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIAVKS 180 (227)
T ss_dssp TTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 22458999998654 2233345599999999999999888544
No 149
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.41 E-value=1e-13 Score=106.45 Aligned_cols=101 Identities=7% Similarity=0.018 Sum_probs=80.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
...+|||||||+|.+++.++.. +++|+++|+++ |++.+++++..++.. .++++ .|.. . ..
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~-----------~~v~~--~d~~---~-~~ 111 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT-----------IKYRF--LNKE---S-DV 111 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS-----------SEEEE--ECCH---H-HH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-----------ccEEE--eccc---c-cC
Confidence 3569999999999999999876 67899999965 999999999988742 14544 3332 1 23
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..++||+|++..++++....+..+..+.+.|+|+|. +|+.+
T Consensus 112 ~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggv-fISfp 152 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNF-VISFP 152 (200)
T ss_dssp TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEE-EEEEE
T ss_pred CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCE-EEEeC
Confidence 457899999999998887777788899999999976 55555
No 150
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.41 E-value=1.5e-12 Score=109.06 Aligned_cols=105 Identities=20% Similarity=0.100 Sum_probs=84.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC---CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG---CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g---~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|.+++.++..+ .+|+++|++ .+++.|++|+...+. .++++.+.|..+. .
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~------------~~i~~~~~D~~~~---~ 267 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL------------SWIRFLRADARHL---P 267 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC------------TTCEEEECCGGGG---G
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC------------CceEEEeCChhhC---c
Confidence 46799999999999999999875 679999995 599999999988863 2788888887543 2
Q ss_pred ccCCCccEEEEeccccCCc--------ChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEH--------LLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~--------~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...+.||+|++++++.... .+..+++.+.++|+|||.+++....
T Consensus 268 ~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 268 RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2345699999998864311 2478899999999999999987764
No 151
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=2.1e-12 Score=100.77 Aligned_cols=94 Identities=15% Similarity=0.204 Sum_probs=77.1
Q ss_pred CCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 43 GKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
+.+|||+|||+|..+..++.. +++|+++ +++.++++ + +++...|.... +...+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~----~---------------~~~~~~d~~~~---~~~~~ 101 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR----G---------------VFVLKGTAENL---PLKDE 101 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT----T---------------CEEEECBTTBC---CSCTT
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc----C---------------CEEEEcccccC---CCCCC
Confidence 789999999999998888765 9999954 88888765 1 35566665432 23356
Q ss_pred CccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 122 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 122 ~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.||+|++..++++..+...+++.+.++|+|||.+++.....
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 102 SFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp CEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 89999999999999999999999999999999999988764
No 152
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.41 E-value=4.4e-13 Score=105.33 Aligned_cols=99 Identities=8% Similarity=0.029 Sum_probs=79.1
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..+..++..+.+|+++|++ .+++.++++. .++.+...|+.... .
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~---~- 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL-----------------PDATLHQGDMRDFR---L- 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC-----------------TTCEEEECCTTTCC---C-
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC-----------------CCCEEEECCHHHcc---c-
Confidence 356899999999999999999988899999995 4988887753 14677777765432 2
Q ss_pred CCCccEEEE-eccccCC---cChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 APPFDYIIG-TDVVYAE---HLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 ~~~fD~Ii~-~~~~~~~---~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
.+.||+|++ .+++.+. .....+++.+.++|+|||.+++...
T Consensus 98 ~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 568999995 4577665 5678899999999999999998754
No 153
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.41 E-value=1.6e-12 Score=108.44 Aligned_cols=100 Identities=15% Similarity=0.105 Sum_probs=81.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|..++. ++.+.+|+++|++ .+++.+++|+..|+. ..++++.+.|.....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l-----------~~~v~~~~~D~~~~~------ 256 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKL-----------EHKIIPILSDVREVD------ 256 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEESCGGGCC------
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECChHHhc------
Confidence 688999999999999999 8855679999995 599999999999874 246888887775332
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
+.||+|+++++.+ ...++..+.++|+|||.+++......
T Consensus 257 ~~fD~Vi~dpP~~----~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 VKGNRVIMNLPKF----AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CCEEEEEECCTTT----GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CCCcEEEECCcHh----HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 6899999986643 34788899999999999888766554
No 154
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.41 E-value=2.4e-12 Score=108.23 Aligned_cols=108 Identities=12% Similarity=0.139 Sum_probs=86.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
...+|||||||+|..+..+++. +.+|+++|++.+++.|++++...+. ..++++...|+..... +.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~-~~- 245 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSG-----------SERIHGHGANLLDRDV-PF- 245 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTT-----------GGGEEEEECCCCSSSC-CC-
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCc-----------ccceEEEEccccccCC-CC-
Confidence 4579999999999999999975 5679999997799999998766542 2478999988764320 11
Q ss_pred CCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.+.||+|++..++++.. ....+++.+.+.|+|||.+++.+...
T Consensus 246 p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 246 PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 26899999999998644 45688999999999999999987643
No 155
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.40 E-value=3.7e-13 Score=117.35 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=83.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++++|||||||+|.+++.+++.++ +|+++|++++++.|++++..+++ ..++++...|+.+.. .
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl-----------~~~v~~~~~d~~~~~----~ 221 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL-----------TDRIVVIPGKVEEVS----L 221 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEESCTTTCC----C
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCC-----------CCcEEEEECchhhCc----c
Confidence 4678999999999999999999876 79999997788999999988864 357999998886532 1
Q ss_pred CCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEE
Q 029065 120 APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.++||+|+++.++|+. ......+..+.++|+|||.+++..
T Consensus 222 ~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 222 PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3589999998887763 445566667789999999987543
No 156
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.40 E-value=7.2e-13 Score=102.79 Aligned_cols=102 Identities=13% Similarity=0.044 Sum_probs=80.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++++|||+|||+|..++.++.. +.+|+++|++ .+++.|++++...+. ..++++...|..+. .+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~~ 122 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----------IDRVELQVGDPLGI--AA 122 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----------GGGEEEEESCHHHH--HT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----------CceEEEEEecHHHH--hc
Confidence 5679999999999999999976 6789999995 599999999887653 23688888776432 12
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
...+ ||+|++.. .......+++.+.++|+|||.+++...
T Consensus 123 ~~~~-fD~v~~~~---~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 123 GQRD-IDILFMDC---DVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp TCCS-EEEEEEET---TTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred cCCC-CCEEEEcC---ChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 2235 99999873 356788999999999999999888543
No 157
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.40 E-value=1.1e-12 Score=106.66 Aligned_cols=99 Identities=18% Similarity=0.197 Sum_probs=79.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
+|.+|||+|||+|..++.+|+.|+ +|+++|++ .+++.+++|+..|++ ..++++.+.|..... .
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v-----------~~~v~~~~~D~~~~~----~ 189 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----------EDRMSAYNMDNRDFP----G 189 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----------TTTEEEECSCTTTCC----C
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEeCcHHHhc----c
Confidence 588999999999999999999985 69999995 599999999999975 356888887765432 2
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.+.||.|+++.+.+. ..++....++|++||.+.+-.
T Consensus 190 ~~~~D~Vi~~~p~~~----~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 190 ENIADRILMGYVVRT----HEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp CSCEEEEEECCCSSG----GGGHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCEEEECCCCcH----HHHHHHHHHHcCCCCEEEEEe
Confidence 568999999877543 356666778899999875543
No 158
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=8.3e-12 Score=96.27 Aligned_cols=126 Identities=24% Similarity=0.275 Sum_probs=88.7
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
..++.+|||+|||+|..++.++..|. +|+++|++ .+++.+++++..++. ++++...|+.+.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~~~~d~~~~---- 109 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-------------KFKVFIGDVSEF---- 109 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-------------SEEEEESCGGGC----
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CEEEEECchHHc----
Confidence 34678999999999999999999876 59999995 499999999877642 578888776532
Q ss_pred ccCCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCCeEEEecCCCc
Q 029065 118 AVAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNFNVKLVPKAKE 188 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 188 (199)
.+.||+|+++++++.. .....+++.+.+++ |.+|+.... .....+.+.+.+ ..+|+++.+.....
T Consensus 110 --~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~ 177 (207)
T 1wy7_A 110 --NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS---DVVYSIHLA-KPEVRRFIEKFSWEHGFVVTHRLTTKI 177 (207)
T ss_dssp --CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC---SEEEEEEEC-CHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --CCCCCEEEEcCCCccccCCchHHHHHHHHHhc---CcEEEEEeC-CcCCHHHHHHHHHHCCCeEEEEEEEec
Confidence 2489999999887664 34567888888887 445554421 122233333333 34677776655443
No 159
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.40 E-value=1.1e-12 Score=103.22 Aligned_cols=102 Identities=15% Similarity=0.146 Sum_probs=82.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|..++.++.. +.+|+++|++ .+++.|++++...+. ..++.+...|..... ..
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~--~~ 120 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL-----------ESRIELLFGDALQLG--EK 120 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC-----------TTTEEEECSCGGGSH--HH
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEECCHHHHH--Hh
Confidence 5679999999999999999987 6789999995 599999999987753 236888887765321 11
Q ss_pred c--CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 119 V--APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 119 ~--~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
. .++||+|+++.+. .....+++.+.++|+|||.+++..
T Consensus 121 ~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp HTTSCCEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred cccCCCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 4689999997653 477899999999999999998864
No 160
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.40 E-value=2e-12 Score=103.01 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=82.8
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++.+|||+|||+|..+..++.. +.+|+++|++ ++++.|++++..++. ..++++...|+.+.
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--- 157 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----------DDRVTIKLKDIYEG--- 157 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----------TTTEEEECSCGGGC---
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----------CCceEEEECchhhc---
Confidence 35789999999999999999987 6789999995 599999999988763 23488888887632
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
...+.||+|+++. .....+++.+.++|+|||.+++..+..
T Consensus 158 -~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 158 -IEEENVDHVILDL-----PQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp -CCCCSEEEEEECS-----SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred -cCCCCcCEEEECC-----CCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 2346799999853 466789999999999999998876543
No 161
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.40 E-value=2.5e-12 Score=107.31 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=86.9
Q ss_pred CCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 43 GKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
+.+|||||||+|..+..+++. +.+++++|++.+++.+++++...+. ..++++...|+..... ...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~--~~~ 246 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDL-----------GGRVEFFEKNLLDARN--FEG 246 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTC-----------GGGEEEEECCTTCGGG--GTT
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCC-----------CCceEEEeCCcccCcc--cCC
Confidence 689999999999999999976 4579999997799999998877653 3468999988764321 124
Q ss_pred CCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 121 PPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
+.||+|++..++++..+ ...+++.+.+.|+|||.+++.+..
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 56999999999987554 589999999999999999998764
No 162
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.39 E-value=1.1e-12 Score=104.85 Aligned_cols=104 Identities=14% Similarity=0.023 Sum_probs=81.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-c
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-I 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~ 116 (199)
++++|||||||+|..++.+++. +.+|+++|++ ++++.|++++...+. ..++++...|..+... .
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----------~~~i~~~~gda~~~l~~l 147 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----------DHKIDFREGPALPVLDEM 147 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCCeEEEECCHHHHHHHH
Confidence 5679999999999999999976 6789999995 599999999987753 2468888877643210 1
Q ss_pred cc---cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 117 KA---VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 117 ~~---~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.. ..++||+|++... ......+++.+.++|+|||.+++..
T Consensus 148 ~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 148 IKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 00 1468999998743 4578899999999999999988765
No 163
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=3.4e-12 Score=101.49 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=89.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHh-hhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++.+|||+|||+|..++.++.. +.+|+++|++ .+++.+++++..+ + ..++++...|+.+.
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g------------~~~v~~~~~d~~~~-- 160 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ------------VENVRFHLGKLEEA-- 160 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------------CCCEEEEESCGGGC--
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC------------CCCEEEEECchhhc--
Confidence 36789999999999999999987 5689999995 5999999998776 5 23688888777533
Q ss_pred ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeE
Q 029065 116 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNV 180 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v 180 (199)
....+.||+|+++. .+...++..+.++|+|||.+++..+... ....+.+.+. .+|..
T Consensus 161 -~~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 161 -ELEEAAYDGVALDL-----MEPWKVLEKAALALKPDRFLVAYLPNIT--QVLELVRAAEAHPFRL 218 (258)
T ss_dssp -CCCTTCEEEEEEES-----SCGGGGHHHHHHHEEEEEEEEEEESCHH--HHHHHHHHHTTTTEEE
T ss_pred -CCCCCCcCEEEECC-----cCHHHHHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHHCCCce
Confidence 12346899999853 4667899999999999999998876542 2344445553 45654
No 164
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.38 E-value=4.3e-12 Score=105.17 Aligned_cols=104 Identities=13% Similarity=0.014 Sum_probs=85.7
Q ss_pred CCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 43 GKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
+.+|||+|||+|..+..+++. +.+++++|++.+++.+++++...+. ..++++...|+... . .
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~---p 233 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGL-----------SGRAQVVVGSFFDP--L---P 233 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC--C---C
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCc-----------CcCeEEecCCCCCC--C---C
Confidence 579999999999999999875 4579999996699999998877643 35799999887521 1 1
Q ss_pred CCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 121 PPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..||+|++..++++..+ ...+++.+.++|+|||.+++.+...
T Consensus 234 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 234 AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 27999999999987665 5899999999999999999987643
No 165
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.38 E-value=4.4e-12 Score=104.84 Aligned_cols=125 Identities=14% Similarity=0.013 Sum_probs=89.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|..++.++.. +.+|+++|+++ +++.+++|+..++. .++++.+.|.....
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------------~~v~~~~~D~~~~~--- 182 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------------LNVILFHSSSLHIG--- 182 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------------CSEEEESSCGGGGG---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------------CeEEEEECChhhcc---
Confidence 5789999999999999999965 36799999955 99999999988863 36788877765332
Q ss_pred ccCCCccEEEEeccccCC------cC----------------hHHHHHHHHHhcCCCcEEEEEEEecCh----hHHHHHH
Q 029065 118 AVAPPFDYIIGTDVVYAE------HL----------------LEPLLQTIFALSGPKTTILLGYEIRST----SVHEQML 171 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~------~~----------------~~~~l~~l~~~l~~~g~i~i~~~~~~~----~~~~~~~ 171 (199)
...+.||+|+++.+.... .+ ...++..+.++|+|||.+++++..-.. .+...|+
T Consensus 183 ~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l 262 (315)
T 1ixk_A 183 ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWAL 262 (315)
T ss_dssp GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHH
Confidence 235689999997664221 11 158899999999999999887754322 2334444
Q ss_pred HHHHhCCeEEEe
Q 029065 172 QMWKSNFNVKLV 183 (199)
Q Consensus 172 ~~~~~~~~v~~~ 183 (199)
+. .+|++..+
T Consensus 263 ~~--~~~~~~~~ 272 (315)
T 1ixk_A 263 DN--FDVELLPL 272 (315)
T ss_dssp HH--SSEEEECC
T ss_pred hc--CCCEEecC
Confidence 43 34555444
No 166
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=2.2e-12 Score=100.06 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=79.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhC---CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLG---CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g---~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++.+|||+|||+|..+..++..+ .+|+++|++ .+++.+++++...+ ..++++...|....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~------------~~~v~~~~~d~~~~--- 140 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG------------YDNVIVIVGDGTLG--- 140 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT------------CTTEEEEESCGGGC---
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC------------CCCeEEEECCcccC---
Confidence 457899999999999999999875 689999995 59999999987765 23578877776322
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
....++||+|+++.++.+.. +.+.++|+|||.+++.....
T Consensus 141 ~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 11246899999998877644 47889999999999887654
No 167
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.38 E-value=1.6e-12 Score=107.47 Aligned_cols=100 Identities=24% Similarity=0.216 Sum_probs=79.7
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCe---EEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCN---VITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~---v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++.+|||||||+|..++.+++.+.+ |+++|++ ++++.|++++..++. .++++...|+....
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------------~~v~~~~~d~~~~~-- 139 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------------ENVIFVCGDGYYGV-- 139 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCGGGCC--
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CCeEEEECChhhcc--
Confidence 35789999999999999999987654 9999995 599999999887763 35888887775421
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...++||+|++..++.+.. +.+.++|+|||.+++....
T Consensus 140 -~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 140 -PEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp -GGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred -ccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 1246899999998887644 5778899999999887543
No 168
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.38 E-value=7.8e-13 Score=105.42 Aligned_cols=104 Identities=20% Similarity=0.162 Sum_probs=82.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++++|||||||+|..++.+|.. +++|+++|+++ +++.|++++...+. ..++++...|..+. ..
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~gda~~~--l~ 126 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----------EHKIKLRLGPALDT--LH 126 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----------TTTEEEEESCHHHH--HH
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHH--HH
Confidence 4689999999999999999974 57899999954 99999999988764 34788888776432 11
Q ss_pred cc-----CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AV-----APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~-----~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.. .++||+|++... ......+++.+.++|+|||.+++....
T Consensus 127 ~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 127 SLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 11 478999998754 466778999999999999999886554
No 169
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.38 E-value=6.7e-12 Score=99.22 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=82.7
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||+|||+|..++.+++.+.+|+++|++ ++++.++++...++. ..++++...|+.+.. ..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~~~~~~~d~~~~~---~~ 155 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNL-----------GKNVKFFNVDFKDAE---VP 155 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTC-----------CTTEEEECSCTTTSC---CC
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCC-----------CCcEEEEEcChhhcc---cC
Confidence 357899999999999999999888889999995 599999999877653 246788877765431 12
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.+.||+|+++. .+...+++.+.++|+|||.+++..+..
T Consensus 156 ~~~~D~v~~~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 156 EGIFHAAFVDV-----REPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp TTCBSEEEECS-----SCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred CCcccEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 45799999853 366788999999999999999988754
No 170
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.38 E-value=2.5e-13 Score=120.69 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=77.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||||||.|.++..+|+.|++|+|+|.++ +++.|+..+..++. -++++.+.+.++... ....
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~------------~~~~~~~~~~~~~~~-~~~~ 132 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPD------------FAAEFRVGRIEEVIA-ALEE 132 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTT------------SEEEEEECCHHHHHH-HCCT
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCC------------CceEEEECCHHHHhh-hccC
Confidence 457999999999999999999999999999955 99999998877652 257777766643211 1235
Q ss_pred CCccEEEEeccccCCcChHHH--HHHHHHhcCCCcEEEEEE
Q 029065 121 PPFDYIIGTDVVYAEHLLEPL--LQTIFALSGPKTTILLGY 159 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~--l~~l~~~l~~~g~i~i~~ 159 (199)
++||+|++.++++|..+...+ +..+.+.+++++..++..
T Consensus 133 ~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 133 GEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp TSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred CCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 689999999999997765544 334455577766554443
No 171
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.38 E-value=4e-12 Score=115.72 Aligned_cols=111 Identities=11% Similarity=0.035 Sum_probs=86.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC---CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG---CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g---~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||||||+|.++..+++.+ .+|+++|+++ +++.|++++...... ......++++.+.|+.+. +
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA------kr~gl~nVefiqGDa~dL---p 791 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK------EACNVKSATLYDGSILEF---D 791 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT------TCSSCSEEEEEESCTTSC---C
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch------hhcCCCceEEEECchHhC---C
Confidence 57899999999999999999987 6899999955 999998877543110 001134788888777543 3
Q ss_pred ccCCCccEEEEeccccCCcChH--HHHHHHHHhcCCCcEEEEEEEec
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~--~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
...+.||+|++..++.+..... .+++.+.++|+|| .++++.+.+
T Consensus 792 ~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 792 SRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred cccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 3457899999999999876544 6899999999999 888887654
No 172
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.37 E-value=9.6e-12 Score=105.01 Aligned_cols=106 Identities=14% Similarity=0.157 Sum_probs=83.6
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC--eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC--NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
..++++|||+| |+|.+++.++..+. +|+++|++ .+++.|++|+..++. .++++...|+... +
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~------------~~v~~~~~D~~~~--l 234 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY------------EDIEIFTFDLRKP--L 234 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC------------CCEEEECCCTTSC--C
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CCEEEEEChhhhh--c
Confidence 34688999999 99999999998875 79999995 599999999988863 3688888887642 1
Q ss_pred cc-cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCc-EEEEEEEe
Q 029065 117 KA-VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKT-TILLGYEI 161 (199)
Q Consensus 117 ~~-~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g-~i~i~~~~ 161 (199)
+. ..+.||+|++++++... ....+++.+.++|+||| .++++...
T Consensus 235 ~~~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 235 PDYALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CTTTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred hhhccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 11 24589999998875433 36889999999999999 44666654
No 173
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.37 E-value=5.2e-12 Score=100.23 Aligned_cols=114 Identities=7% Similarity=-0.075 Sum_probs=79.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|..++.+|.. +..|+|+|+++ +++.|++++....... .....++.+...|.........
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~------~~~~~nv~~~~~d~~~~l~~~~ 119 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAP------AGGFQNIACLRSNAMKHLPNFF 119 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHST------TCCCTTEEEEECCTTTCHHHHC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHH------hcCCCeEEEEECcHHHhhhhhC
Confidence 4568999999999999999977 45799999955 9999998875421000 0113578998888754211112
Q ss_pred cCCCccEEEEeccccCCc--------ChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 119 VAPPFDYIIGTDVVYAEH--------LLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~--------~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
..+.||.|+++-+--+.. ....+++.+.++|+|||.+++....
T Consensus 120 ~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 120 YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 357899998753211110 1257999999999999999987654
No 174
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.37 E-value=1.2e-12 Score=103.90 Aligned_cols=122 Identities=11% Similarity=0.120 Sum_probs=84.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh------CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL------GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~------g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
++.+|||||||+|..++.+++. +++|+++|+++ +++.|+ +. ..++++...|.....
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~-----------~~~v~~~~gD~~~~~ 143 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SD-----------MENITLHQGDCSDLT 143 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GG-----------CTTEEEEECCSSCSG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------cc-----------CCceEEEECcchhHH
Confidence 4679999999999999999986 67899999954 777665 11 236888888876542
Q ss_pred cccccC-CCccEEEEeccccCCcChHHHHHHHHH-hcCCCcEEEEEEE-----ecChhHHHHHHHHHHhCCeEEEe
Q 029065 115 HIKAVA-PPFDYIIGTDVVYAEHLLEPLLQTIFA-LSGPKTTILLGYE-----IRSTSVHEQMLQMWKSNFNVKLV 183 (199)
Q Consensus 115 ~~~~~~-~~fD~Ii~~~~~~~~~~~~~~l~~l~~-~l~~~g~i~i~~~-----~~~~~~~~~~~~~~~~~~~v~~~ 183 (199)
...... .+||+|++... + ..+..++..+.+ +|+|||.+++.+. .........+++....+|++...
T Consensus 144 ~l~~~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~ 216 (236)
T 2bm8_A 144 TFEHLREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDML 216 (236)
T ss_dssp GGGGGSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETT
T ss_pred HHHhhccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcch
Confidence 122223 37999998654 2 477889999997 9999999988652 11122334444444445666433
No 175
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.37 E-value=4.1e-12 Score=100.76 Aligned_cols=106 Identities=16% Similarity=0.043 Sum_probs=72.4
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhh-C--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.-+|.+|||+|||+|..+..+|.. + .+|+++|+++ +++.+...+... .++.+...|......
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--------------~nv~~i~~Da~~~~~ 139 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--------------PNIFPLLADARFPQS 139 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--------------TTEEEEECCTTCGGG
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--------------CCeEEEEcccccchh
Confidence 346789999999999999999865 3 4799999954 765554433322 267888877654432
Q ss_pred ccccCCCccEEEEeccccCCcChHH-HHHHHHHhcCCCcEEEEEEEec
Q 029065 116 IKAVAPPFDYIIGTDVVYAEHLLEP-LLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~~~~~~~-~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.....+.||+|+++-+. .+... +...+.++|+|||.++++.+.+
T Consensus 140 ~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~ 184 (232)
T 3id6_C 140 YKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKAR 184 (232)
T ss_dssp TTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred hhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccC
Confidence 22224689999987543 33333 4556667999999999886443
No 176
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.37 E-value=6.8e-13 Score=105.82 Aligned_cols=83 Identities=19% Similarity=0.205 Sum_probs=62.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC-c-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D-HI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~~ 116 (199)
++.+|||+|||+|.+++.++.. +.+|+++|++ .+++.|++|+..++. ..++++.+.|..+. . ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~~~~~ 133 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-----------SDLIKVVKVPQKTLLMDAL 133 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTCSSTTTS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC-----------CccEEEEEcchhhhhhhhh
Confidence 5679999999999999888865 6789999995 599999999988763 23588888875431 1 11
Q ss_pred ccc-CCCccEEEEeccccCC
Q 029065 117 KAV-APPFDYIIGTDVVYAE 135 (199)
Q Consensus 117 ~~~-~~~fD~Ii~~~~~~~~ 135 (199)
... ++.||+|+++++++..
T Consensus 134 ~~~~~~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 134 KEESEIIYDFCMCNPPFFAN 153 (254)
T ss_dssp TTCCSCCBSEEEECCCCC--
T ss_pred hcccCCcccEEEECCCCccC
Confidence 111 2589999999887653
No 177
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.37 E-value=7.2e-12 Score=96.30 Aligned_cols=117 Identities=20% Similarity=0.208 Sum_probs=78.7
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||+|||+|..++.++..|. +|+++|++ .+++.+++++. ++++...|+...
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----------------~~~~~~~d~~~~----- 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----------------GVNFMVADVSEI----- 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------------TSEEEECCGGGC-----
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------------CCEEEECcHHHC-----
Confidence 4678999999999999999998876 59999995 49999988753 346777666532
Q ss_pred cCCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeEEEecCC
Q 029065 119 VAPPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNVKLVPKA 186 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (199)
.+.||+|++++++++.. ....+++.+.+.+ |.+++.............+.. .+ .++.+...
T Consensus 108 -~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~~~~~~~~~~~~~--~g-~~~~~~~~ 170 (200)
T 1ne2_A 108 -SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIGNAKARDFLRREFSA--RG-DVFREEKV 170 (200)
T ss_dssp -CCCEEEEEECCCC-------CHHHHHHHHHHE---EEEEEEEEGGGHHHHHHHHHH--HE-EEEEEEEE
T ss_pred -CCCeeEEEECCCchhccCchhHHHHHHHHHhc---CcEEEEEcCchHHHHHHHHHH--CC-CEEEEEEE
Confidence 26899999999987743 3457888888888 556666544333222333333 24 55554433
No 178
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.37 E-value=4.2e-12 Score=106.64 Aligned_cols=103 Identities=14% Similarity=0.049 Sum_probs=84.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||+|||+|..+..++.. +.+++++|++.+++.+++++..++. ..++++...|+.+. .
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~--- 245 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGL-----------ADRVTVAEGDFFKP--L--- 245 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC--C---
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCC-----------CCceEEEeCCCCCc--C---
Confidence 4679999999999999999977 4579999995599999999877653 34789998887531 1
Q ss_pred CCCccEEEEeccccCCcCh--HHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~--~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
...||+|+++.++++..+. ..+++.+.++|+|||.+++...
T Consensus 246 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2249999999999876654 4899999999999999988776
No 179
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.37 E-value=8.2e-12 Score=104.60 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=85.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|..+..+++. +.+|+++|++.+++.+++++...+. ..++++...|+....
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~~----- 253 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGV-----------ADRMRGIAVDIYKES----- 253 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTC-----------TTTEEEEECCTTTSC-----
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCC-----------CCCEEEEeCccccCC-----
Confidence 4679999999999999999987 4589999995599999999887653 336899888876431
Q ss_pred CCCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.+.+|+|++..++++..+ ...+++.+.+.|+|||.+++.+..
T Consensus 254 ~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 254 YPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp CCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred CCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 123499999999987665 889999999999999999888743
No 180
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.37 E-value=4.3e-12 Score=102.59 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=89.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|.+++.+++. +.+|+++|++ .+++.|++++..++. ..++++...|+.+.
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~---- 176 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----------IERVTIKVRDISEG---- 176 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----------GGGEEEECCCGGGC----
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----------CCCEEEEECCHHHc----
Confidence 5779999999999999999987 4679999994 599999999887753 23678888777533
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLV 183 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~ 183 (199)
...+.||+|+++. .....++..+.++|+|||.+++..+.... ...+.+.+. .+|...++
T Consensus 177 ~~~~~~D~V~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~--~~~~~~~l~~~gf~~~~~ 236 (277)
T 1o54_A 177 FDEKDVDALFLDV-----PDPWNYIDKCWEALKGGGRFATVCPTTNQ--VQETLKKLQELPFIRIEV 236 (277)
T ss_dssp CSCCSEEEEEECC-----SCGGGTHHHHHHHEEEEEEEEEEESSHHH--HHHHHHHHHHSSEEEEEE
T ss_pred ccCCccCEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCHHH--HHHHHHHHHHCCCceeEE
Confidence 2245799999853 46678999999999999999888764321 234444443 46765443
No 181
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.37 E-value=5e-12 Score=100.57 Aligned_cols=116 Identities=7% Similarity=-0.044 Sum_probs=80.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|..++.++..+ ..|+++|+++ +++.+++++..+.... .......++.+...|..+......
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~~~~~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNT----ASKHGFQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-----CCSTTTTEEEEECCTTSCGGGTS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhcc----ccccCCCcEEEEeccHHHHHHHhc
Confidence 56799999999999999999886 3699999955 9999999987762100 000013478888888764321113
Q ss_pred cCCCccEEEEecc--ccCCc------ChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 119 VAPPFDYIIGTDV--VYAEH------LLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 119 ~~~~fD~Ii~~~~--~~~~~------~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
..+.+|.|+...+ .+... ....++..+.++|+|||.+++....
T Consensus 125 ~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 3568999886522 11000 1258999999999999999886543
No 182
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.37 E-value=1.4e-12 Score=102.10 Aligned_cols=106 Identities=14% Similarity=0.083 Sum_probs=82.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~ 116 (199)
++++|||+|||+|..++.+++. +.+|+++|++ .+++.+++++..++. ..++++...|..+.. ..
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~~d~~~~~~~~ 137 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----------EHKIDLRLKPALETLDEL 137 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----------TTTEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----------CCeEEEEEcCHHHHHHHH
Confidence 5789999999999999999975 5689999995 599999999987753 347888887764221 11
Q ss_pred cccC--CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 117 KAVA--PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 117 ~~~~--~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.... +.||+|++... ......+++.+.++|+|||.+++....
T Consensus 138 ~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 1011 68999999754 456788999999999999998886544
No 183
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.36 E-value=4.3e-12 Score=102.92 Aligned_cols=106 Identities=10% Similarity=0.025 Sum_probs=83.3
Q ss_pred CCcEEEeCCCc---ChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 43 GKRVIELGAGC---GVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 43 ~~~VLdlGcG~---G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
..+|||||||+ |..+..+++. +++|+++|++ .|++.+++++... .++++...|+.+....
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~--------------~~v~~~~~D~~~~~~~ 143 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD--------------PNTAVFTADVRDPEYI 143 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC--------------TTEEEEECCTTCHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC--------------CCeEEEEeeCCCchhh
Confidence 36999999999 9877666654 6789999995 5999999887322 3688888887653211
Q ss_pred --------cccCCCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 117 --------KAVAPPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 117 --------~~~~~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.....+||+|+++.++++..+ ...+++.+.++|+|||.++++....
T Consensus 144 ~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 144 LNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 112248999999999988554 8999999999999999999998765
No 184
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.36 E-value=3e-13 Score=115.40 Aligned_cols=101 Identities=12% Similarity=0.168 Sum_probs=78.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC--ccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE--DHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~ 118 (199)
++.+|||||||+|..+..++..|.+|+++|+++ +++.|+++ +. ......+... ...+.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~---------------~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GI---------------RVRTDFFEKATADDVRR 167 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TC---------------CEECSCCSHHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CC---------------CcceeeechhhHhhccc
Confidence 578999999999999999999999999999955 88888765 21 1111111000 11122
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
..++||+|++..+++|..++..+++.+.++|+|||.+++..+.
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 3578999999999999999999999999999999999998764
No 185
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.36 E-value=1.5e-12 Score=111.80 Aligned_cols=111 Identities=19% Similarity=0.331 Sum_probs=80.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CC-eEEEeechh-HHHHH-------HHHHHHhhhccccCCCCCCCCCcEEEEEee-
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GC-NVITTDQIE-VLPLL-------KRNVEWNTSRISQMNPGSDLLGSIQAVELD- 109 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~-~v~~~D~~~-~l~~a-------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d- 109 (199)
-++.+|||||||+|.+++.+|.. ++ +|+|+|+++ +++.| +.++...+.. ..++++...|
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~----------~~nV~~i~gD~ 310 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR----------LNNVEFSLKKS 310 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----------CCCEEEEESSC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----------CCceEEEEcCc
Confidence 36789999999999999999985 54 699999954 88888 7777666521 2467777643
Q ss_pred eCCCccccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 110 WGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 110 ~~~~~~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
+..........++||+|+++..++ ..++..++..+.+.|+|||.+++..+..
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred cccccccccccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 221111111236899999887664 4677788899999999999999875443
No 186
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.36 E-value=1.5e-12 Score=103.26 Aligned_cols=132 Identities=14% Similarity=0.112 Sum_probs=80.2
Q ss_pred CCCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEE-EeeeCCCcc
Q 029065 39 SKLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV-ELDWGNEDH 115 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~~ 115 (199)
...++++|||||||+|..+..++..|+ +|+++|+++ +++.++++... +... ..++.....
T Consensus 34 ~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~-----------------~~~~~~~~~~~~~~ 96 (232)
T 3opn_A 34 LEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER-----------------VVVMEQFNFRNAVL 96 (232)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT-----------------EEEECSCCGGGCCG
T ss_pred CCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc-----------------ccccccceEEEeCH
Confidence 345788999999999999999999886 799999965 88887664221 1110 111111110
Q ss_pred ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec---------------Chh----HHHHHHHHH-H
Q 029065 116 IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR---------------STS----VHEQMLQMW-K 175 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~---------------~~~----~~~~~~~~~-~ 175 (199)
.......||.+...-++. .+..++..+.++|+|||.+++..... ... ..+.+.+.+ .
T Consensus 97 ~~~~~~~~d~~~~D~v~~---~l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~ 173 (232)
T 3opn_A 97 ADFEQGRPSFTSIDVSFI---SLDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQ 173 (232)
T ss_dssp GGCCSCCCSEEEECCSSS---CGGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHH
T ss_pred hHcCcCCCCEEEEEEEhh---hHHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHH
Confidence 001112356554433322 24889999999999999988863210 011 123344444 3
Q ss_pred hCCeEEEecCCCcCc
Q 029065 176 SNFNVKLVPKAKEST 190 (199)
Q Consensus 176 ~~~~v~~~~~~~~~~ 190 (199)
.||++..+..+...-
T Consensus 174 aGf~v~~~~~~pi~g 188 (232)
T 3opn_A 174 LGFSVKGLTFSPIKG 188 (232)
T ss_dssp HTEEEEEEEECSSCB
T ss_pred CCCEEEEEEEccCCC
Confidence 589988777665543
No 187
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.36 E-value=5.7e-12 Score=104.37 Aligned_cols=102 Identities=12% Similarity=0.053 Sum_probs=83.9
Q ss_pred CcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 44 KRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
.+|||+|||+|..+..++.. +.+++++|++.+++.+++++...+. ..++++...|+... . .+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~---~~ 232 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLA-----------GERVSLVGGDMLQE--V---PS 232 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHH-----------TTSEEEEESCTTTC--C---CS
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCC-----------CCcEEEecCCCCCC--C---CC
Confidence 79999999999999999876 5679999995599999998876654 34789988887542 1 25
Q ss_pred CccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 122 PFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 122 ~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.||+|++..++++..+ ...+++.+.+.|+|||.+++.+..
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 7999999999976554 449999999999999999998754
No 188
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.36 E-value=9.6e-12 Score=107.04 Aligned_cols=125 Identities=12% Similarity=0.146 Sum_probs=91.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-cccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~ 119 (199)
.+.+|||+|||+|.+++.++..+.+|+++|+++ +++.|++|+..++. .++++...|+.+... ....
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~------------~~v~f~~~d~~~~l~~~~~~ 353 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGL------------QNVTFYHENLEEDVTKQPWA 353 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEECCTTSCCSSSGGG
T ss_pred CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCC------------CceEEEECCHHHHhhhhhhh
Confidence 467999999999999999999888999999954 99999999988863 478999988865321 1223
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCCeEEEecC
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNFNVKLVPK 185 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 185 (199)
.+.||+|+++++.... ..+++.+.+ ++|++.+|++.... .+.+-+..+ ..+|.+..+..
T Consensus 354 ~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc~p~---tlard~~~l~~~Gy~~~~~~~ 413 (433)
T 1uwv_A 354 KNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSCNPA---TLARDSEALLKAGYTIARLAM 413 (433)
T ss_dssp TTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEESCHH---HHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEECChH---HHHhhHHHHHHCCcEEEEEEE
Confidence 4689999998775433 256666654 68999999876432 222323333 45788876543
No 189
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.35 E-value=4.1e-12 Score=100.55 Aligned_cols=105 Identities=14% Similarity=0.075 Sum_probs=80.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-c
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-I 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~ 116 (199)
++++|||||||+|..++.+++. +.+|+++|++ .+++.|++++..++. ..++++...|...... .
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----------~~~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----------ENKIFLKLGSALETLQVL 128 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCCEEEEECCHHHHHHHH
Confidence 4789999999999999999987 5689999995 599999999887753 2357888777642110 1
Q ss_pred c-----------cc-C-CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 117 K-----------AV-A-PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 117 ~-----------~~-~-~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
. .. . ++||+|++.. .......+++.+.++|+|||.+++...
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~---~~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLDA---DKENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HhhcccccccccccCCCCCcCEEEEeC---CHHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 0 01 2 6899999873 345677899999999999999998763
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.35 E-value=5.3e-12 Score=103.50 Aligned_cols=130 Identities=12% Similarity=-0.001 Sum_probs=86.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++++|||||||+|..+..+++. ..+|+++|+++ +++.|++++...+... -...++++...|..... ..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~-------~~~~rv~~~~~D~~~~l--~~ 153 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGS-------YDDPRFKLVIDDGVNFV--NQ 153 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSC-------TTCTTCCEECSCSCC-----C
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccccc-------ccCCceEEEEChHHHHH--hh
Confidence 4689999999999999999986 35699999955 9999999886542100 01246788887765432 12
Q ss_pred cCCCccEEEEeccc--cCCcC--hHHHHHHHHHhcCCCcEEEEEEEec--ChhHHHHHHHHHHhCCeE
Q 029065 119 VAPPFDYIIGTDVV--YAEHL--LEPLLQTIFALSGPKTTILLGYEIR--STSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~--~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~~--~~~~~~~~~~~~~~~~~v 180 (199)
..++||+|+++.+. ..... ...+++.+.++|+|||.+++..... ..+....+.+.+...|..
T Consensus 154 ~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~ 221 (294)
T 3adn_A 154 TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSD 221 (294)
T ss_dssp CCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSE
T ss_pred cCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCC
Confidence 35689999995432 11211 2789999999999999988765432 223345555555554543
No 191
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.35 E-value=6.2e-13 Score=103.54 Aligned_cols=107 Identities=11% Similarity=0.080 Sum_probs=74.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|..+..++.. +.+|+++|+++ +++.+.+++..+... ....++++...|..+.. .
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~--------~~~~~v~~~~~d~~~l~---~ 95 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAK--------GGLPNLLYLWATAERLP---P 95 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGG--------TCCTTEEEEECCSTTCC---S
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhh--------cCCCceEEEecchhhCC---C
Confidence 5679999999999999999988 67899999954 888654443322110 11347888888876543 2
Q ss_pred cCCCccEEEEecc---cc--CCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 119 VAPPFDYIIGTDV---VY--AEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 119 ~~~~fD~Ii~~~~---~~--~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..+. |.|...-+ .+ +..+...+++.+.++|+|||.+++...
T Consensus 96 ~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 96 LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 2334 66653321 11 334558999999999999999999764
No 192
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.35 E-value=3.7e-12 Score=100.56 Aligned_cols=102 Identities=19% Similarity=0.242 Sum_probs=78.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhC-CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLG-CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g-~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.++.+|||+|||+|..+..+++.+ .+|+++|++ .+++.+++++...+ ..++++...|+.. .. .
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~------------~~~v~~~~~d~~~--~~-~ 154 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAG------------VKNVHVILGDGSK--GF-P 154 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTT------------CCSEEEEESCGGG--CC-G
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcC------------CCCcEEEECCccc--CC-C
Confidence 356799999999999999999876 789999985 59999999988775 3357887777521 11 1
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
...+||+|+++.++.+.. ..+.+.|+|||.+++......
T Consensus 155 ~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 155 PKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp GGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSSS
T ss_pred CCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecCC
Confidence 234699999987765432 367889999999999887543
No 193
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.35 E-value=5.8e-12 Score=104.45 Aligned_cols=127 Identities=15% Similarity=0.076 Sum_probs=89.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHH--hhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEW--NTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++|||||||+|..+..+++. +.+|+++|++ .+++.|++++.. ++.. ..++++...|+... .
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~----------~~~v~~~~~D~~~~--l 183 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE----------DKRVNVFIEDASKF--L 183 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG----------STTEEEEESCHHHH--H
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC----------CCcEEEEEccHHHH--H
Confidence 4679999999999999999976 4679999995 499999998754 2211 24788888776432 1
Q ss_pred cccCCCccEEEEecccc--CCcC--hHHHHHHHHHhcCCCcEEEEEEEec--ChhHHHHHHHHHHhCCeE
Q 029065 117 KAVAPPFDYIIGTDVVY--AEHL--LEPLLQTIFALSGPKTTILLGYEIR--STSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~--~~~~--~~~~l~~l~~~l~~~g~i~i~~~~~--~~~~~~~~~~~~~~~~~v 180 (199)
....++||+|+++.+-. .... ...+++.+.++|+|||.+++..... .......+.+.+.+.|..
T Consensus 184 ~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 253 (321)
T 2pt6_A 184 ENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKK 253 (321)
T ss_dssp HHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSE
T ss_pred hhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCC
Confidence 11246899999875311 1111 1789999999999999988865432 233455666666665543
No 194
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.34 E-value=4e-12 Score=94.65 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=82.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C--CeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc---
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH--- 115 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--- 115 (199)
++.+|||+|||+|..+..+++. | .+|+++|++++++. .++++...|+.+...
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~----------------------~~~~~~~~d~~~~~~~~~ 79 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI----------------------VGVDFLQGDFRDELVMKA 79 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC----------------------TTEEEEESCTTSHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc----------------------CcEEEEEcccccchhhhh
Confidence 5679999999999999999976 3 67999998554211 256777777654320
Q ss_pred cc--ccCCCccEEEEeccccCCcCh-----------HHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeE
Q 029065 116 IK--AVAPPFDYIIGTDVVYAEHLL-----------EPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 116 ~~--~~~~~fD~Ii~~~~~~~~~~~-----------~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v 180 (199)
.. ...++||+|+++.++++.... ..++..+.++|+|||.+++........ ..+.+.+...|..
T Consensus 80 ~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~--~~~~~~~~~~~~~ 155 (180)
T 1ej0_A 80 LLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGF--DEYLREIRSLFTK 155 (180)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTH--HHHHHHHHHHEEE
T ss_pred hhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcH--HHHHHHHHHhhhh
Confidence 00 234689999999888766554 789999999999999999887755432 3444445444544
No 195
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.34 E-value=1.6e-12 Score=102.54 Aligned_cols=102 Identities=15% Similarity=0.068 Sum_probs=70.9
Q ss_pred CCCcEEEeCCCcChHHHHHHh--hCCeEEEeech-h-HHHHH---HHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 42 KGKRVIELGAGCGVAGFGMAL--LGCNVITTDQI-E-VLPLL---KRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~--~g~~v~~~D~~-~-~l~~a---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
++.+|||||||+|..++.+++ .+++|+|+|++ + +++.| ++++...+ ..++.+...|.....
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~------------~~~v~~~~~d~~~l~ 91 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG------------LSNVVFVIAAAESLP 91 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC------------CSSEEEECCBTTBCC
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC------------CCCeEEEEcCHHHhh
Confidence 467999999999999999994 46779999996 6 76666 66655544 346888887775442
Q ss_pred cccccCCCccEEEEeccccC-----CcChHHHHHHHHHhcCCCcEEEE
Q 029065 115 HIKAVAPPFDYIIGTDVVYA-----EHLLEPLLQTIFALSGPKTTILL 157 (199)
Q Consensus 115 ~~~~~~~~fD~Ii~~~~~~~-----~~~~~~~l~~l~~~l~~~g~i~i 157 (199)
. .....+|.|.++.+... ......++..+.++|+|||.+++
T Consensus 92 ~--~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 92 F--ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp G--GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred h--hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 1 11244555555432211 12346789999999999999988
No 196
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.34 E-value=6.1e-12 Score=101.91 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=82.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--C-CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc-
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--G-CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI- 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g-~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~- 116 (199)
++.+|||+|||+|..+..++.. + .+|+++|+++ +++.+++|+..++. .++++...|.......
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------------~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------------LNTIIINADMRKYKDYL 150 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCHHHHHHHH
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------------CcEEEEeCChHhcchhh
Confidence 5789999999999999999863 4 6799999954 99999999988763 3688888776432110
Q ss_pred cccCCCccEEEEeccccCC------------------cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 117 KAVAPPFDYIIGTDVVYAE------------------HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~------------------~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
....+.||+|+++.+.... .....+++.+.++|+|||.++++....
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 0014689999998665432 345789999999999999998877543
No 197
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.33 E-value=1e-11 Score=102.17 Aligned_cols=132 Identities=14% Similarity=-0.016 Sum_probs=87.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++++|||||||+|..+..+++. ..+|+++|+++ +++.+++++...... ....++++...|....... .
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--------~~~~~v~~~~~D~~~~~~~-~ 165 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRS--------LADPRATVRVGDGLAFVRQ-T 165 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG--------GGCTTEEEEESCHHHHHHS-S
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcc--------cCCCcEEEEECcHHHHHHh-c
Confidence 5679999999999999999976 45799999954 999999987431100 0034788888776432110 0
Q ss_pred cCCCccEEEEeccccCCcC----hHHHHHHHHHhcCCCcEEEEEEEec--ChhHHHHHHHHHHh-CCeEEE
Q 029065 119 VAPPFDYIIGTDVVYAEHL----LEPLLQTIFALSGPKTTILLGYEIR--STSVHEQMLQMWKS-NFNVKL 182 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~----~~~~l~~l~~~l~~~g~i~i~~~~~--~~~~~~~~~~~~~~-~~~v~~ 182 (199)
..++||+|+++.+...... ...+++.+.++|+|||.+++..... .......+.+.+.+ +|....
T Consensus 166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEE
T ss_pred cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEE
Confidence 2568999999765433221 1689999999999999988875542 22234455555544 576543
No 198
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.33 E-value=1.5e-11 Score=105.68 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=77.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|.+++.+|+.+.+|+++|++ ++++.|++|+..|+ .. +++...|..+.. .
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ng------------l~-v~~~~~d~~~~~-----~ 351 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINN------------VD-AEFEVASDREVS-----V 351 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------------CC-EEEEECCTTTCC-----C
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcC------------Cc-EEEEECChHHcC-----c
Confidence 56799999999999999999998899999995 49999999998886 23 788887776432 1
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..||+|+++++.. .....+++.+.. |+|+|.+|++..
T Consensus 352 ~~fD~Vv~dPPr~--g~~~~~~~~l~~-l~p~givyvsc~ 388 (425)
T 2jjq_A 352 KGFDTVIVDPPRA--GLHPRLVKRLNR-EKPGVIVYVSCN 388 (425)
T ss_dssp TTCSEEEECCCTT--CSCHHHHHHHHH-HCCSEEEEEESC
T ss_pred cCCCEEEEcCCcc--chHHHHHHHHHh-cCCCcEEEEECC
Confidence 2899999987632 233457777754 899999999764
No 199
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.32 E-value=4.3e-12 Score=100.64 Aligned_cols=104 Identities=13% Similarity=0.031 Sum_probs=80.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-c
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-I 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~ 116 (199)
++++|||||||+|..++.+++. +.+|+++|++ ++++.|++++...+. ..++++...|..+... .
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----------EHKINFIESDAMLALDNL 138 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHHH
Confidence 5679999999999999999976 6789999995 599999999988764 2368888877643211 1
Q ss_pred cc---cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 117 KA---VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 117 ~~---~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.. ..+.||+|++.. .......+++.+.++|+|||.+++..
T Consensus 139 ~~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HHSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhccCCCCCcCEEEECC---chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 00 146899999864 24567899999999999999988765
No 200
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.32 E-value=9.1e-12 Score=104.16 Aligned_cols=104 Identities=15% Similarity=0.087 Sum_probs=84.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|..+..++..+ .+++++|++.+++.+++++..++. ..++++...|+.+. .
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~-----------~~~v~~~~~d~~~~--~--- 246 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGL-----------SDRVDVVEGDFFEP--L--- 246 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTC-----------TTTEEEEECCTTSC--C---
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCC-----------CCceEEEeCCCCCC--C---
Confidence 46799999999999999999774 469999995599999999877653 34789998887532 1
Q ss_pred CCCccEEEEeccccCCcCh--HHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~--~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...||+|+++.++++..+. ..+++.+.++|+|||.+++.+..
T Consensus 247 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 2349999999999876544 58999999999999999988765
No 201
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.32 E-value=2.7e-12 Score=101.36 Aligned_cols=107 Identities=17% Similarity=0.114 Sum_probs=81.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-HI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~ 116 (199)
++++|||+|||+|..++.++.. +.+|+++|++ ++++.|++++...+. ..++++...|..+.. ..
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----------~~~i~~~~~d~~~~l~~l 140 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----------AEKISLRLGPALATLEQL 140 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEESCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----------CCcEEEEEcCHHHHHHHH
Confidence 5679999999999999999976 5689999995 499999999887753 236888877654211 11
Q ss_pred cccC--CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 117 KAVA--PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 117 ~~~~--~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.... +.||+|++... ......+++.+.++|+|||.+++....+
T Consensus 141 ~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 141 TQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp HTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred HhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 1112 68999998754 4577889999999999999998865443
No 202
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.31 E-value=7.2e-12 Score=98.05 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=80.2
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC-------eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC-------NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~-------~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
..++.+|||||||+|..+..++..+. +|+++|++ .+++.|++++..++... -...++++...|..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-------~~~~~v~~~~~d~~ 150 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPEL-------LKIDNFKIIHKNIY 150 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGG-------GSSTTEEEEECCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccc-------cccCCEEEEECChH
Confidence 34578999999999999999998754 89999995 59999999987764100 00236788887765
Q ss_pred CCcc-ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 112 NEDH-IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 112 ~~~~-~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.... .....++||+|++..++.+ ++..+.++|+|||.+++....
T Consensus 151 ~~~~~~~~~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 151 QVNEEEKKELGLFDAIHVGASASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GCCHHHHHHHCCEEEEEECSBBSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred hcccccCccCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 3210 0022468999999877653 357888999999999998875
No 203
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.31 E-value=1.4e-11 Score=101.02 Aligned_cols=126 Identities=13% Similarity=0.023 Sum_probs=85.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHH--hhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEW--NTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.+++|||||||+|..+..+++. ..+|+++|++ .+++.|++++.. ++.. ..++++...|.... .
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~----------~~~v~~~~~D~~~~--l 157 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD----------DPRAEIVIANGAEY--V 157 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG----------CTTEEEEESCHHHH--G
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC----------CCceEEEECcHHHH--H
Confidence 4679999999999999999987 3579999995 499999998754 2211 24788888776432 1
Q ss_pred cccCCCccEEEEeccccCCc-----ChHHHHHHHHHhcCCCcEEEEEEEe--cChhHHHHHHHHHHhCCe
Q 029065 117 KAVAPPFDYIIGTDVVYAEH-----LLEPLLQTIFALSGPKTTILLGYEI--RSTSVHEQMLQMWKSNFN 179 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~-----~~~~~l~~l~~~l~~~g~i~i~~~~--~~~~~~~~~~~~~~~~~~ 179 (199)
....++||+|+++.+-.+.. ....+++.+.++|+|||.+++.... ..........+.+.+.|.
T Consensus 158 ~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 227 (296)
T 1inl_A 158 RKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFP 227 (296)
T ss_dssp GGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCS
T ss_pred hhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCC
Confidence 12246899999864321011 3478999999999999998887543 223334445555554443
No 204
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.31 E-value=1.5e-11 Score=99.25 Aligned_cols=103 Identities=18% Similarity=0.152 Sum_probs=81.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHh-h-hccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWN-T-SRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~-~-~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.++.+|||+|||+|..+..++.. +.+|+++|++ .+++.|++++..+ + . ..++++...|+.+.
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-----------~~~v~~~~~d~~~~- 165 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-----------PDNWRLVVSDLADS- 165 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-----------CTTEEEECSCGGGC-
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-----------CCcEEEEECchHhc-
Confidence 35779999999999999999985 5689999995 5999999998776 3 1 23678887776533
Q ss_pred cccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 115 HIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 115 ~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
....+.||+|+++. .+...++..+.++|+|||.+++..+..
T Consensus 166 --~~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 166 --ELPDGSVDRAVLDM-----LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp --CCCTTCEEEEEEES-----SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred --CCCCCceeEEEECC-----cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 22256899999853 366689999999999999998887654
No 205
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.29 E-value=2.3e-11 Score=98.65 Aligned_cols=129 Identities=11% Similarity=-0.012 Sum_probs=88.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C-CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G-CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g-~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++++|||||||+|..+..+++. + .+|+++|++ .+++.|++++...... -...++++...|.... ...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~--------~~~~rv~v~~~D~~~~--l~~ 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGK--------LDDPRVDVQVDDGFMH--IAK 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTT--------TTSTTEEEEESCSHHH--HHT
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccc--------cCCCceEEEECcHHHH--Hhh
Confidence 5689999999999999999987 4 579999995 5999999987542100 0134788888775421 112
Q ss_pred cCCCccEEEEeccccCCc----ChHHHHHHHHHhcCCCcEEEEEEEe--cChhHHHHHHHHHHhCCeE
Q 029065 119 VAPPFDYIIGTDVVYAEH----LLEPLLQTIFALSGPKTTILLGYEI--RSTSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~----~~~~~l~~l~~~l~~~g~i~i~~~~--~~~~~~~~~~~~~~~~~~v 180 (199)
..++||+|+++.+..... ....+++.+.++|+|||.+++.... ..........+.+.+.|..
T Consensus 145 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPI 212 (275)
T ss_dssp CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSE
T ss_pred CCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCC
Confidence 246899999964432111 1378999999999999998886533 2233445555666666643
No 206
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.29 E-value=1.7e-11 Score=100.87 Aligned_cols=125 Identities=16% Similarity=0.055 Sum_probs=83.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeech-hHHHHHHHHHHH--hhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQI-EVLPLLKRNVEW--NTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~-~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.+++|||||||+|..+..+++.. .+|+++|++ .+++.|++++.. ++.. ..++++...|.... .
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~----------~~rv~v~~~Da~~~--l 162 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS----------SSKLTLHVGDGFEF--M 162 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG----------CTTEEEEESCHHHH--H
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC----------CCcEEEEECcHHHH--H
Confidence 56899999999999999999874 579999995 599999998765 2211 24788887765421 1
Q ss_pred cccCCCccEEEEeccccCC----cChHHHHHHHHHhcCCCcEEEEEEEe--cChhHHHHHHHHHHhCC
Q 029065 117 KAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGPKTTILLGYEI--RSTSVHEQMLQMWKSNF 178 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~----~~~~~~l~~l~~~l~~~g~i~i~~~~--~~~~~~~~~~~~~~~~~ 178 (199)
....++||+|+++.+.... .....+++.+.++|+|||.+++.... ........+.+.+..-|
T Consensus 163 ~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f 230 (304)
T 2o07_A 163 KQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLF 230 (304)
T ss_dssp HTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHC
T ss_pred hhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhC
Confidence 1235689999986543211 12467899999999999998887643 22233334444444434
No 207
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.28 E-value=1.5e-11 Score=100.52 Aligned_cols=129 Identities=15% Similarity=0.083 Sum_probs=82.9
Q ss_pred CCCCCcEEEeCCCcChHHHHHHhhCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEE-EEeeeCCCccc
Q 029065 40 KLKGKRVIELGAGCGVAGFGMALLGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQA-VELDWGNEDHI 116 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~d~~~~~~~ 116 (199)
.+++++|||+|||||.++..++..|+ +|+++|++. |++.+.++ + .++.. ...++......
T Consensus 83 ~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~--------------~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 83 SVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D--------------DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C--------------TTEEEECSCCGGGCCGG
T ss_pred CccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C--------------cccceecccCceecchh
Confidence 45789999999999999999998886 699999955 88775432 1 12211 11122111111
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe---------------cChh----HHHHHHHHH-Hh
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI---------------RSTS----VHEQMLQMW-KS 176 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~---------------~~~~----~~~~~~~~~-~~ 176 (199)
......||+|++.-.+. .+..++..+.++|+|||.+++...+ +.+. ..+.+...+ ..
T Consensus 146 ~l~~~~fD~v~~d~sf~---sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~ 222 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFI---SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDY 222 (291)
T ss_dssp GCTTCCCSEEEECCSSS---CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCEEEEEeeHh---hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHC
Confidence 11233599999865443 4689999999999999998887322 1111 123344443 35
Q ss_pred CCeEEEecCCCc
Q 029065 177 NFNVKLVPKAKE 188 (199)
Q Consensus 177 ~~~v~~~~~~~~ 188 (199)
+|.+..+..+.+
T Consensus 223 Gf~v~~~~~spi 234 (291)
T 3hp7_A 223 GFSVKGLDFSPI 234 (291)
T ss_dssp TEEEEEEEECSS
T ss_pred CCEEEEEEECCC
Confidence 899887777655
No 208
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.28 E-value=1.7e-11 Score=94.22 Aligned_cols=115 Identities=17% Similarity=0.263 Sum_probs=80.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc----
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK---- 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---- 117 (199)
++.+|||||||+|.++..++..+++|+++|++++. . ..++++.+.|+.+.....
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~----------~------------~~~v~~~~~D~~~~~~~~~~~~ 82 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME----------E------------IAGVRFIRCDIFKETIFDDIDR 82 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC----------C------------CTTCEEEECCTTSSSHHHHHHH
T ss_pred CCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc----------c------------CCCeEEEEccccCHHHHHHHHH
Confidence 57899999999999999999988899999986530 0 236788888876543211
Q ss_pred ccC----CCccEEEEeccccCCc-----------ChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeE
Q 029065 118 AVA----PPFDYIIGTDVVYAEH-----------LLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 118 ~~~----~~fD~Ii~~~~~~~~~-----------~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v 180 (199)
... ++||+|+++....... ....++....++|+|||.+++....... ...+...+...|.-
T Consensus 83 ~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~--~~~~~~~l~~~F~~ 158 (191)
T 3dou_A 83 ALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM--TNDFIAIWRKNFSS 158 (191)
T ss_dssp HHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH--HHHHHHHHGGGEEE
T ss_pred HhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC--HHHHHHHHHHhcCE
Confidence 011 4899999975432211 2356788888999999998876654333 35566666666643
No 209
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.28 E-value=3e-11 Score=99.80 Aligned_cols=128 Identities=15% Similarity=0.080 Sum_probs=88.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHH-hhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEW-NTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.+++|||||||+|..+..+++. +.+|+++|++ .+++.|++++.. +.-.. ...++++...|.... ..
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~--------~~~~v~~~~~D~~~~--l~ 146 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAF--------DDPRAVLVIDDARAY--LE 146 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG--------GCTTEEEEESCHHHH--HH
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccc--------cCCceEEEEchHHHH--HH
Confidence 4679999999999999999976 4579999995 499999998754 21000 024788888776432 12
Q ss_pred ccCCCccEEEEeccccC---C--c--ChHHHHHHHHHhcCCCcEEEEEEEec---ChhHHHHHHHHHHhCCe
Q 029065 118 AVAPPFDYIIGTDVVYA---E--H--LLEPLLQTIFALSGPKTTILLGYEIR---STSVHEQMLQMWKSNFN 179 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~---~--~--~~~~~l~~l~~~l~~~g~i~i~~~~~---~~~~~~~~~~~~~~~~~ 179 (199)
...++||+|+++.+... . . ....+++.+.++|+|||.+++..... .......+.+.+..-|.
T Consensus 147 ~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~ 218 (314)
T 1uir_A 147 RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFR 218 (314)
T ss_dssp HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCS
T ss_pred hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCC
Confidence 23568999999755432 1 1 14789999999999999988765432 22334555566665553
No 210
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.28 E-value=7.1e-12 Score=101.75 Aligned_cols=116 Identities=19% Similarity=0.196 Sum_probs=77.7
Q ss_pred CCCcEEEeCCCcCh----HHHHHHhh-C-----CeEEEeechh-HHHHHHHHHHHhh----hcc----ccC---CCC-C-
Q 029065 42 KGKRVIELGAGCGV----AGFGMALL-G-----CNVITTDQIE-VLPLLKRNVEWNT----SRI----SQM---NPG-S- 97 (199)
Q Consensus 42 ~~~~VLdlGcG~G~----~sl~la~~-g-----~~v~~~D~~~-~l~~a~~~~~~~~----~~~----~~~---~~~-~- 97 (199)
++.+|||+|||||. +++.++.. + .+|+++|+++ |++.|++++-... .+. +.+ ... +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999997 56666654 3 4799999955 9999998752100 000 000 000 0
Q ss_pred ------CCCCcEEEEEeeeCCCccccccCCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEE
Q 029065 98 ------DLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 98 ------~~~~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
....++.+.+.|+.+... ...++||+|+|..++.+. .....++..+.+.|+|||.+++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~--~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQY--NVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSC--CCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCCC--CcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 001368888888865311 114689999999887553 345899999999999999988843
No 211
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.28 E-value=9.5e-12 Score=96.49 Aligned_cols=110 Identities=10% Similarity=0.021 Sum_probs=79.3
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
.++.+|||||||+|..+..+ +.+|+++|+++. + +.+...|+.+ .+...
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~----------~----------------~~~~~~d~~~---~~~~~ 113 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---RNPVHCFDLASL----------D----------------PRVTVCDMAQ---VPLED 113 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS----------S----------------TTEEESCTTS---CSCCT
T ss_pred CCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC----------C----------------ceEEEecccc---CCCCC
Confidence 35679999999999988776 368999998553 1 2344555543 22335
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH-hCCeEEEe
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK-SNFNVKLV 183 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~~v~~~ 183 (199)
+.||+|+++.+++ ..+...+++.+.++|+|||.+++............+.+.+. .+|++...
T Consensus 114 ~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 114 ESVDVAVFCLSLM-GTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp TCEEEEEEESCCC-SSCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred CCEeEEEEehhcc-ccCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 6899999999886 48899999999999999999999876543222344555553 46777554
No 212
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.27 E-value=1.1e-11 Score=99.47 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=74.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|..+..++.. +.+|+++|+++ +++.++++. .++.+...|+... +.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~---~~ 144 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----------------PQVTFCVASSHRL---PF 144 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----------------TTSEEEECCTTSC---SB
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----------------CCcEEEEcchhhC---CC
Confidence 5779999999999999999986 77899999955 888887653 1456666666432 23
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecCh
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
..++||+|+++.+ ..+++.+.++|+|||.+++..+....
T Consensus 145 ~~~~fD~v~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 145 SDTSMDAIIRIYA-------PCKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp CTTCEEEEEEESC-------CCCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred CCCceeEEEEeCC-------hhhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 3568999998754 23588999999999999999887543
No 213
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.27 E-value=2.3e-11 Score=102.74 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=77.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC--eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|.+++.++..+. +|+++|+++ +++.|+.|+..++. ..++++.+.|..+. ..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl-----------~~~i~~~~~D~~~~---~~ 282 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV-----------LDKIKFIQGDATQL---SQ 282 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC-----------GGGCEEEECCGGGG---GG
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC-----------CCceEEEECChhhC---Cc
Confidence 578999999999999999999887 899999955 99999999988864 24688888887543 23
Q ss_pred cCCCccEEEEeccccCC----c----ChHHHHHHHHHhcCCCcEEEE
Q 029065 119 VAPPFDYIIGTDVVYAE----H----LLEPLLQTIFALSGPKTTILL 157 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~----~----~~~~~l~~l~~~l~~~g~i~i 157 (199)
..+.||+|++++++... . .+..+++.+.++| +++.+++
T Consensus 283 ~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 34789999999886431 1 1467888888888 3334444
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.26 E-value=2.1e-11 Score=99.17 Aligned_cols=131 Identities=17% Similarity=0.033 Sum_probs=85.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC-CeEEEeech-hHHHHHHHHHHHh--hhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG-CNVITTDQI-EVLPLLKRNVEWN--TSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g-~~v~~~D~~-~~l~~a~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.+++|||||||+|..+..+++.+ .+|+++|++ .+++.|++++ .. +.. + . ...+...++++...|.... ..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~-~-~-~~~~~~~~v~~~~~D~~~~--l~ 148 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLL-E-A-MLNGKHEKAKLTIGDGFEF--IK 148 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHH-H-H-HHTTCCSSEEEEESCHHHH--HH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccc-c-c-cccCCCCcEEEEECchHHH--hc
Confidence 56899999999999999999875 469999995 5999999987 22 110 0 0 0000134788887665321 11
Q ss_pred ccCCCccEEEEeccccC--CcC--hHHHHHHHHHhcCCCcEEEEEEEec--ChhHHHHHHHHHHhCCe
Q 029065 118 AVAPPFDYIIGTDVVYA--EHL--LEPLLQTIFALSGPKTTILLGYEIR--STSVHEQMLQMWKSNFN 179 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~--~~~--~~~~l~~l~~~l~~~g~i~i~~~~~--~~~~~~~~~~~~~~~~~ 179 (199)
. .++||+|+++.+... ... ...+++.+.++|+|||.+++..... .......+.+.+...|.
T Consensus 149 ~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~ 215 (281)
T 1mjf_A 149 N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFD 215 (281)
T ss_dssp H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCS
T ss_pred c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCC
Confidence 2 568999998754321 112 3788999999999999988865432 33334455555544454
No 215
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.26 E-value=1.4e-11 Score=96.32 Aligned_cols=105 Identities=23% Similarity=0.256 Sum_probs=77.8
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-C--CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++.+|||+|||+|..+..++.. | .+|+++|++ .+++.+++++..++... -...++.+...|....
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-------~~~~~v~~~~~d~~~~--- 145 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTL-------LSSGRVQLVVGDGRMG--- 145 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHH-------HHTSSEEEEESCGGGC---
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccc-------cCCCcEEEEECCcccC---
Confidence 45789999999999999999976 4 589999995 59999999887653100 0023678888776522
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
....++||+|++..++. .++..+.++|+|||.++++...
T Consensus 146 ~~~~~~fD~i~~~~~~~------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAP------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCEEEEEECSBBS------SCCHHHHHTEEEEEEEEEEESC
T ss_pred cccCCCcCEEEECCchH------HHHHHHHHhcCCCcEEEEEEec
Confidence 12246899999887653 3346788999999999998764
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.26 E-value=1.9e-11 Score=101.93 Aligned_cols=107 Identities=15% Similarity=0.028 Sum_probs=78.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHh--hhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWN--TSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.+++|||||||+|..+..+++. +.+|+++|+++ +++.|++++... +.. ..++++...|+.....
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~----------~~rv~~~~~D~~~~l~- 188 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE----------DPRVNLVIGDGVAFLK- 188 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG----------STTEEEEESCHHHHHH-
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC----------CCcEEEEECCHHHHHH-
Confidence 4679999999999999999986 46799999955 999999987653 211 2478888887643210
Q ss_pred cccCCCccEEEEecc--ccCCcC--hHHHHHHHHHhcCCCcEEEEEE
Q 029065 117 KAVAPPFDYIIGTDV--VYAEHL--LEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~--~~~~~~--~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
....++||+|+++.+ ...... ...+++.+.++|+|||.+++..
T Consensus 189 ~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 189 NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp TSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred hccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 112468999998643 221121 4789999999999999988863
No 217
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.24 E-value=1.3e-11 Score=103.05 Aligned_cols=101 Identities=14% Similarity=0.084 Sum_probs=77.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+.+|||||||+|..+..+++.. .+++++|++.++. +.++...+. ..++++...|+. +..
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~-----------~~~v~~~~~d~~--~~~--- 245 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDV-----------AGRWKVVEGDFL--REV--- 245 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGG-----------TTSEEEEECCTT--TCC---
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCC-----------CCCeEEEecCCC--CCC---
Confidence 46799999999999999999764 4589999876544 222222221 347899988875 111
Q ss_pred CCCccEEEEeccccCCcCh--HHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLL--EPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~--~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
. .||+|++..++++..+. ..+++.+.++|+|||.++|.+..
T Consensus 246 p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 246 P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2 89999999999887766 79999999999999999998754
No 218
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.24 E-value=3.8e-11 Score=97.80 Aligned_cols=129 Identities=16% Similarity=0.087 Sum_probs=88.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++++|||||||+|..+..+++. +.+|+++|++ .+++.|++++...+... ...++++...|.... ...
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~--------~~~~v~~~~~D~~~~--l~~ 147 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY--------EDKRVNVFIEDASKF--LEN 147 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG--------GSTTEEEEESCHHHH--HHH
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcccc--------CCCcEEEEECChHHH--HHh
Confidence 5689999999999999999976 3579999995 49999999875431000 024788888776432 111
Q ss_pred cCCCccEEEEeccccC--CcCh--HHHHHHHHHhcCCCcEEEEEEEec--ChhHHHHHHHHHHhCCeE
Q 029065 119 VAPPFDYIIGTDVVYA--EHLL--EPLLQTIFALSGPKTTILLGYEIR--STSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~--~~~~--~~~l~~l~~~l~~~g~i~i~~~~~--~~~~~~~~~~~~~~~~~v 180 (199)
..++||+|++..+... .... ..+++.+.++|+|||.+++..... .......+.+.+.+.|..
T Consensus 148 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 215 (283)
T 2i7c_A 148 VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKK 215 (283)
T ss_dssp CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSE
T ss_pred CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCc
Confidence 2568999998543221 2222 699999999999999988875432 233345566666655643
No 219
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.24 E-value=1.9e-11 Score=101.08 Aligned_cols=106 Identities=14% Similarity=-0.022 Sum_probs=74.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHh--hhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWN--TSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.+++|||||||+|..+..+++. +.+|+++|++ .+++.|++++... +.. ..++++...|.... .
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~----------~~rv~~~~~D~~~~--l 175 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS----------HPKLDLFCGDGFEF--L 175 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG----------CTTEEEECSCHHHH--H
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC----------CCCEEEEEChHHHH--H
Confidence 4579999999999999999976 4679999995 4999999987542 210 24788887776432 1
Q ss_pred cccCCCccEEEEeccccC--CcC-h-HHHHHHHHHhcCCCcEEEEEE
Q 029065 117 KAVAPPFDYIIGTDVVYA--EHL-L-EPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~--~~~-~-~~~l~~l~~~l~~~g~i~i~~ 159 (199)
....++||+|+++.+-.. ... . ..+++.+.++|+|||.+++..
T Consensus 176 ~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 176 KNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp HHCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred HhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 123568999998643211 111 2 789999999999999988865
No 220
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.23 E-value=3.8e-11 Score=94.10 Aligned_cols=105 Identities=13% Similarity=0.147 Sum_probs=77.2
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-C-------CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-G-------CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g-------~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
.++.+|||+|||+|..+..++.. + .+|+++|++ ++++.+++++..++... -...++++...|..
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-------~~~~~v~~~~~d~~ 155 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM-------LDSGQLLIVEGDGR 155 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH-------HHHTSEEEEESCGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc-------cCCCceEEEECCcc
Confidence 35779999999999999999874 4 489999995 59999999887654100 00126788887765
Q ss_pred CCccccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 112 NEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 112 ~~~~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.. ....++||+|++...+.+. .+.+.+.|+|||.+++....
T Consensus 156 ~~---~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 156 KG---YPPNAPYNAIHVGAAAPDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GC---CGGGCSEEEEEECSCBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred cC---CCcCCCccEEEECCchHHH------HHHHHHHhcCCCEEEEEEec
Confidence 32 1123689999998776542 37788999999999988754
No 221
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.22 E-value=7.6e-11 Score=90.30 Aligned_cols=114 Identities=12% Similarity=0.066 Sum_probs=75.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh----CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc--
Q 029065 42 KGKRVIELGAGCGVAGFGMALL----GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-- 115 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~----g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-- 115 (199)
++.+|||||||+|.++..++.. +.+|+++|++++. . ..++++.+.|+.+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~------------~~~v~~~~~d~~~~~~~~ 79 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------P------------IPNVYFIQGEIGKDNMNN 79 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------C------------CTTCEEEECCTTTTSSCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------C------------CCCceEEEccccchhhhh
Confidence 4679999999999999999976 3579999986631 0 1245666666654320
Q ss_pred ---------------c-----cccCCCccEEEEeccccCCc----Ch-------HHHHHHHHHhcCCCcEEEEEEEecCh
Q 029065 116 ---------------I-----KAVAPPFDYIIGTDVVYAEH----LL-------EPLLQTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 116 ---------------~-----~~~~~~fD~Ii~~~~~~~~~----~~-------~~~l~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
. ......||+|+++..+.+.. +. ..++..+.++|+|||.+++.......
T Consensus 80 ~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 80 IKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp C-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred hccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 0 02246899999987654421 11 24788899999999999886554322
Q ss_pred hHHHHHHHHHHhCCe
Q 029065 165 SVHEQMLQMWKSNFN 179 (199)
Q Consensus 165 ~~~~~~~~~~~~~~~ 179 (199)
...+...+...|.
T Consensus 160 --~~~l~~~l~~~f~ 172 (201)
T 2plw_A 160 --TNNLKTYLKGMFQ 172 (201)
T ss_dssp --HHHHHHHHHTTEE
T ss_pred --HHHHHHHHHHHHh
Confidence 2445555555554
No 222
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.22 E-value=1.3e-10 Score=96.52 Aligned_cols=114 Identities=14% Similarity=0.111 Sum_probs=77.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-C--CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-G--CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++.+|||+|||+|.+++.+++. | .+|+++|++ .+++.|++++...+... ..+...+...++++...|..+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~ln~~~~~~~~v~~~~~d~~~~~~- 181 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSW-KLSHVEEWPDNVDFIHKDISGATE- 181 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHH-TTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccc-ccccccccCCceEEEECChHHccc-
Confidence 46789999999999999999987 5 579999995 59999999987532000 000000012468888877754321
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
....+.||+|+++.+ ....++..+.++|+|||.+++..+.
T Consensus 182 ~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 182 DIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred ccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 122457999998643 3444889999999999998876653
No 223
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.21 E-value=6.2e-11 Score=102.52 Aligned_cols=126 Identities=13% Similarity=0.118 Sum_probs=89.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
+|.+|||+|||+|..++.+|.. ..+|+++|+++ +++.+++|+..++. .++.+.+.|..... .
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~------------~nv~v~~~Da~~l~--~ 170 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV------------SNAIVTNHAPAELV--P 170 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC------------SSEEEECCCHHHHH--H
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CceEEEeCCHHHhh--h
Confidence 5789999999999999999865 35799999955 99999999999873 36777776654221 1
Q ss_pred ccCCCccEEEEeccccCCc----------------------ChHHHHHHHHHhcCCCcEEEEEEEecCh----hHHHHHH
Q 029065 118 AVAPPFDYIIGTDVVYAEH----------------------LLEPLLQTIFALSGPKTTILLGYEIRST----SVHEQML 171 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~----------------------~~~~~l~~l~~~l~~~g~i~i~~~~~~~----~~~~~~~ 171 (199)
...+.||+|+++++..... ....++..+.++|+|||.++.++..-.. .+...|+
T Consensus 171 ~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l 250 (456)
T 3m4x_A 171 HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLV 250 (456)
T ss_dssp HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHH
Confidence 1357899999987642211 1237788889999999999887764332 3344454
Q ss_pred HHHHhCCeEEEe
Q 029065 172 QMWKSNFNVKLV 183 (199)
Q Consensus 172 ~~~~~~~~v~~~ 183 (199)
+.. +|++..+
T Consensus 251 ~~~--~~~l~~~ 260 (456)
T 3m4x_A 251 ENY--PVTIEEI 260 (456)
T ss_dssp HHS--SEEEECC
T ss_pred HhC--CCEEEec
Confidence 443 3665544
No 224
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.20 E-value=3.5e-11 Score=101.49 Aligned_cols=124 Identities=13% Similarity=0.012 Sum_probs=79.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc-
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV- 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~- 119 (199)
.+.+|||+|||+|.+++.+|+.+.+|+++|++ ++++.|++|+..|+. .++++...|..+.......
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~------------~~v~~~~~d~~~~~~~~~~~ 280 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHI------------DNVQIIRMAAEEFTQAMNGV 280 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTC------------CSEEEECCCSHHHHHHHSSC
T ss_pred CCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC------------CceEEEECCHHHHHHHHhhc
Confidence 36789999999999999999987889999995 499999999998873 4788887776432110000
Q ss_pred ------------CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeEEEecC
Q 029065 120 ------------APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNVKLVPK 185 (199)
Q Consensus 120 ------------~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (199)
...||+|+.+++.. .....+ .+.|+++|.++..... +....+=+..+..+|+++.+..
T Consensus 281 ~~~~~l~~~~~~~~~fD~Vv~dPPr~--g~~~~~----~~~l~~~g~ivyvsc~--p~t~ard~~~l~~~y~~~~~~~ 350 (369)
T 3bt7_A 281 REFNRLQGIDLKSYQCETIFVDPPRS--GLDSET----EKMVQAYPRILYISCN--PETLCKNLETLSQTHKVERLAL 350 (369)
T ss_dssp CCCTTGGGSCGGGCCEEEEEECCCTT--CCCHHH----HHHHTTSSEEEEEESC--HHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccccccccccccCCCCEEEECcCcc--ccHHHH----HHHHhCCCEEEEEECC--HHHHHHHHHHHhhCcEEEEEEe
Confidence 13799999987643 122333 3444566654433322 2222222233334577765543
No 225
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.20 E-value=8.1e-11 Score=97.22 Aligned_cols=123 Identities=13% Similarity=0.002 Sum_probs=86.2
Q ss_pred CcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 44 KRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
.+|||||||+|..+..+++. +.+|+++|++ .+++.|++++.... ..++++...|...... ....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~------------~~rv~v~~~Da~~~l~-~~~~ 157 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR------------APRVKIRVDDARMVAE-SFTP 157 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC------------TTTEEEEESCHHHHHH-TCCT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC------------CCceEEEECcHHHHHh-hccC
Confidence 39999999999999999973 6689999995 49999999874431 3478888877643211 1124
Q ss_pred CCccEEEEeccccC--Cc--ChHHHHHHHHHhcCCCcEEEEEEEecCh-hHHHHHHHHHHhCCe
Q 029065 121 PPFDYIIGTDVVYA--EH--LLEPLLQTIFALSGPKTTILLGYEIRST-SVHEQMLQMWKSNFN 179 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~--~~--~~~~~l~~l~~~l~~~g~i~i~~~~~~~-~~~~~~~~~~~~~~~ 179 (199)
++||+|++...... .. ....+++.+.++|+|||.+++....... .....+...+.+-|.
T Consensus 158 ~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~ 221 (317)
T 3gjy_A 158 ASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE 221 (317)
T ss_dssp TCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS
T ss_pred CCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC
Confidence 68999998632211 11 1378999999999999998777654322 234455666666664
No 226
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.19 E-value=6.5e-11 Score=102.55 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=88.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
+|.+|||+|||+|..++.+|.. ..+|+++|+++ +++.+++|+..++. . +.+.+.|..... .
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------------~-v~~~~~Da~~l~--~ 165 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------------P-LAVTQAPPRALA--E 165 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------------C-CEEECSCHHHHH--H
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------------e-EEEEECCHHHhh--h
Confidence 5789999999999999999965 25799999955 99999999998863 3 666666653221 1
Q ss_pred ccCCCccEEEEeccccC------CcC----------------hHHHHHHHHHhcCCCcEEEEEEEecCh----hHHHHHH
Q 029065 118 AVAPPFDYIIGTDVVYA------EHL----------------LEPLLQTIFALSGPKTTILLGYEIRST----SVHEQML 171 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~------~~~----------------~~~~l~~l~~~l~~~g~i~i~~~~~~~----~~~~~~~ 171 (199)
...+.||+|+++++... ..+ ...++..+.++|+|||.++.++..-.. .+...|+
T Consensus 166 ~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l 245 (464)
T 3m6w_A 166 AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFL 245 (464)
T ss_dssp HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHH
Confidence 13578999998766421 111 267888999999999999887764332 2344444
Q ss_pred HHHHhCCeEEEec
Q 029065 172 QMWKSNFNVKLVP 184 (199)
Q Consensus 172 ~~~~~~~~v~~~~ 184 (199)
+.. .+|++..+.
T Consensus 246 ~~~-~~~~l~~~~ 257 (464)
T 3m6w_A 246 KAH-PEFRLEDAR 257 (464)
T ss_dssp HHC-TTEEEECCC
T ss_pred HHC-CCcEEEecc
Confidence 332 146665543
No 227
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.19 E-value=8e-11 Score=98.22 Aligned_cols=103 Identities=10% Similarity=-0.010 Sum_probs=78.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC-------CeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG-------CNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g-------~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
++.+|||+|||+|.+.+.++... .+|+|+|++ .+++.|+.|+..++. .+.+...|....
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-------------~~~i~~~D~l~~ 196 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-------------KMTLLHQDGLAN 196 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-------------CCEEEESCTTSC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-------------CceEEECCCCCc
Confidence 45799999999999998888653 569999995 599999999987752 456666665432
Q ss_pred ccccccCCCccEEEEeccccCCcC-----------------h-HHHHHHHHHhcCCCcEEEEEEEe
Q 029065 114 DHIKAVAPPFDYIIGTDVVYAEHL-----------------L-EPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 114 ~~~~~~~~~fD~Ii~~~~~~~~~~-----------------~-~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...++||+|++++|+..... . ..++..+.++|+|||.+++..+.
T Consensus 197 ----~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 197 ----LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp ----CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ----cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 12468999999999632111 1 25899999999999999888864
No 228
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.19 E-value=5.3e-11 Score=90.77 Aligned_cols=113 Identities=18% Similarity=0.106 Sum_probs=73.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C----------CeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEE-Eee
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G----------CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV-ELD 109 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g----------~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d 109 (199)
++.+|||||||+|.+++.+++. + .+|+++|++++. . ..++++. ..|
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~------------~~~~~~~~~~d 79 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------P------------LEGATFLCPAD 79 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------C------------CTTCEEECSCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------c------------CCCCeEEEecc
Confidence 4689999999999999999976 4 679999986621 0 1245666 556
Q ss_pred eCCCccc-----cccCCCccEEEEeccccCCc----Ch-------HHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHH
Q 029065 110 WGNEDHI-----KAVAPPFDYIIGTDVVYAEH----LL-------EPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQM 173 (199)
Q Consensus 110 ~~~~~~~-----~~~~~~fD~Ii~~~~~~~~~----~~-------~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~ 173 (199)
+...... ....++||+|+++..+.... +. ..++..+.++|+|||.+++....... ...+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~ 157 (196)
T 2nyu_A 80 VTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ--SRRLQRR 157 (196)
T ss_dssp TTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG--GHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc--HHHHHHH
Confidence 5432110 01235899999976543321 11 47899999999999999887654322 2344444
Q ss_pred HHhCC
Q 029065 174 WKSNF 178 (199)
Q Consensus 174 ~~~~~ 178 (199)
+...|
T Consensus 158 l~~~f 162 (196)
T 2nyu_A 158 LTEEF 162 (196)
T ss_dssp HHHHE
T ss_pred HHHHh
Confidence 44434
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.19 E-value=7.5e-11 Score=94.52 Aligned_cols=100 Identities=8% Similarity=0.039 Sum_probs=76.3
Q ss_pred CCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 43 GKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
..+|||||||+|.+++.++.. .++|+++|+++ +++.++.|+..++. ...+...|.... .+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-------------~~~~~v~D~~~~----~p 195 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-------------PHRTNVADLLED----RL 195 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-------------CEEEEECCTTTS----CC
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-------------CceEEEeeeccc----CC
Confidence 569999999999999999876 45699999965 99999999999874 356666665422 24
Q ss_pred CCCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.++||++++.-++.+.+. ....+ .+.+.|+++|. +++.+.
T Consensus 196 ~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~v-vVSfp~ 237 (281)
T 3lcv_B 196 DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNI-VVTFPT 237 (281)
T ss_dssp CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEE-EEEEEC
T ss_pred CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCE-EEeccc
Confidence 678999999988877332 23344 78888999876 555555
No 230
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.18 E-value=3.9e-11 Score=101.91 Aligned_cols=101 Identities=12% Similarity=0.129 Sum_probs=78.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCc-EEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGS-IQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~~ 116 (199)
+|.+|||++||+|..++.+++. |+ +|+++|++ .+++.+++|++.|++. .+ +++.+.|.....
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~-----------~~~v~v~~~Da~~~l-- 118 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP-----------EDRYEIHGMEANFFL-- 118 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC-----------GGGEEEECSCHHHHH--
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC-----------CceEEEEeCCHHHHH--
Confidence 4689999999999999999985 54 59999995 5999999999999742 23 788776654221
Q ss_pred c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 117 K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 117 ~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
. ...+.||+|++++ |. ....++....++|+++|.+|++.
T Consensus 119 ~~~~~~~fD~V~lDP--~g--~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 119 RKEWGFGFDYVDLDP--FG--TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp HSCCSSCEEEEEECC--SS--CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhhCCCCcEEEECC--Cc--CHHHHHHHHHHHhCCCCEEEEEe
Confidence 1 1245799999876 32 34578999999999999888876
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.18 E-value=1.2e-10 Score=101.37 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=80.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|..++.+|.. +.+|+++|+++ +++.+++|+..++. .++.+.+.|......
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------------~nv~~~~~D~~~~~~-- 182 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------------SNVALTHFDGRVFGA-- 182 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------------CSEEEECCCSTTHHH--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------------CcEEEEeCCHHHhhh--
Confidence 6789999999999999999975 35799999955 99999999998873 367777776643221
Q ss_pred ccCCCccEEEEeccccCC------cC----------------hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 118 AVAPPFDYIIGTDVVYAE------HL----------------LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~------~~----------------~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
...+.||+|+++.+.... .+ ...++..+.++|+|||.+++++..
T Consensus 183 ~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 183 AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 124689999997664221 11 246788889999999999887764
No 232
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.18 E-value=6.6e-11 Score=100.19 Aligned_cols=100 Identities=20% Similarity=0.114 Sum_probs=77.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C-CeEEEeech-hHHHHHHHHHHHh---------------hhccccCCCCCCCCCcE
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G-CNVITTDQI-EVLPLLKRNVEWN---------------TSRISQMNPGSDLLGSI 103 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g-~~v~~~D~~-~~l~~a~~~~~~~---------------~~~~~~~~~~~~~~~~i 103 (199)
++.+|||+|||+|..++.+++. + .+|+++|++ ++++.+++|+..| +. .++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------------~~i 114 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------------KTI 114 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------------SEE
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------------Cce
Confidence 6789999999999999999987 4 469999995 5999999999998 42 247
Q ss_pred EEEEeeeCCCccccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 104 QAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 104 ~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
++.+.|..... ....+.||+|+.. +++ ....++....+.++++|.++++.
T Consensus 115 ~v~~~Da~~~~--~~~~~~fD~I~lD-P~~---~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 115 VINHDDANRLM--AERHRYFHFIDLD-PFG---SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EEEESCHHHHH--HHSTTCEEEEEEC-CSS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCcHHHHH--HhccCCCCEEEeC-CCC---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 77776664321 1113579999965 433 24688999999999999888864
No 233
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.18 E-value=1.7e-10 Score=96.71 Aligned_cols=102 Identities=22% Similarity=0.157 Sum_probs=82.1
Q ss_pred CCcEEEeCCCcChHHHHHHhhCC--eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 43 GKRVIELGAGCGVAGFGMALLGC--NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
..+|+|||||+|..++.+++... +++..|.+++++.+++++...+ .+++++...|+... ..
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~------------~~rv~~~~gD~~~~-----~~ 242 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQE------------EEQIDFQEGDFFKD-----PL 242 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--------------CCSEEEEESCTTTS-----CC
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcc------------cCceeeecCccccC-----CC
Confidence 46999999999999999998744 5788898889999988765433 45899999887532 23
Q ss_pred CCccEEEEeccccCCcC--hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 121 PPFDYIIGTDVVYAEHL--LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~--~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
+.+|++++..++++.++ ...+++.+.+.|+|||.++|.+..
T Consensus 243 ~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 46899999999987554 468899999999999999998864
No 234
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.18 E-value=6.7e-11 Score=95.38 Aligned_cols=122 Identities=7% Similarity=-0.053 Sum_probs=84.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHH--hhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEW--NTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+++|||||||+|..+..+++.+.+|+++|++ .+++.|++++.. ++.. ..++++...|....
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~----------~~rv~~~~~D~~~~----- 136 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKN----------NKNFTHAKQLLDLD----- 136 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHT----------CTTEEEESSGGGSC-----
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccC----------CCeEEEEechHHHH-----
Confidence 46799999999999998888767679999995 499999876533 1111 23677776555422
Q ss_pred cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEec--ChhHHHHHHHHHHhCCeEEEec
Q 029065 119 VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIR--STSVHEQMLQMWKSNFNVKLVP 184 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~--~~~~~~~~~~~~~~~~~v~~~~ 184 (199)
. ++||+|++.. .++..+++.+.+.|+|||.+++..... .........+.+...|....+.
T Consensus 137 ~-~~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~ 198 (262)
T 2cmg_A 137 I-KKYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPF 198 (262)
T ss_dssp C-CCEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEE
T ss_pred H-hhCCEEEECC-----CChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEE
Confidence 1 6899999862 344569999999999999988865432 2223444555555556554433
No 235
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.17 E-value=2.2e-11 Score=99.23 Aligned_cols=77 Identities=18% Similarity=0.181 Sum_probs=61.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|.++..++..+.+|+++|++ .+++.+++++..++. ..++++...|+.... .
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------~~~v~~~~~D~~~~~-----~ 91 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPV-----------ASKLQVLVGDVLKTD-----L 91 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTT-----------GGGEEEEESCTTTSC-----C
T ss_pred CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCceEEEEcceeccc-----c
Confidence 56799999999999999999999999999995 499999988765432 236888888876432 2
Q ss_pred CCccEEEEeccccC
Q 029065 121 PPFDYIIGTDVVYA 134 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~ 134 (199)
..||+|+++.+++.
T Consensus 92 ~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 92 PFFDTCVANLPYQI 105 (285)
T ss_dssp CCCSEEEEECCGGG
T ss_pred hhhcEEEEecCccc
Confidence 37999999877655
No 236
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.16 E-value=1.1e-10 Score=95.73 Aligned_cols=76 Identities=21% Similarity=0.223 Sum_probs=58.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|.++..++..+.+|+++|++ .+++.+++++..++ ..++++...|+.... .
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~------------~~~v~~~~~D~~~~~-----~ 104 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEG------------YNNLEVYEGDAIKTV-----F 104 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTT------------CCCEEC----CCSSC-----C
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcC------------CCceEEEECchhhCC-----c
Confidence 56799999999999999999998999999995 49999999987664 246788887775432 2
Q ss_pred CCccEEEEeccccC
Q 029065 121 PPFDYIIGTDVVYA 134 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~ 134 (199)
+.||+|+++.+++.
T Consensus 105 ~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 105 PKFDVCTANIPYKI 118 (299)
T ss_dssp CCCSEEEEECCGGG
T ss_pred ccCCEEEEcCCccc
Confidence 47999999877654
No 237
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.16 E-value=2.5e-10 Score=98.66 Aligned_cols=129 Identities=17% Similarity=0.105 Sum_probs=89.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--C-CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--G-CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g-~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|..+..++.. + .+|+++|++. +++.+++|+..++. .++.+...|.......
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------------~~v~~~~~D~~~~~~~- 325 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------------KIVKPLVKDARKAPEI- 325 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------------CSEEEECSCTTCCSSS-
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------------CcEEEEEcChhhcchh-
Confidence 5779999999999999999975 3 5799999955 99999999988763 3678877776543210
Q ss_pred ccCCCccEEEEeccccCC------cCh----------------HHHHHHHHHhcCCCcEEEEEEEecChh----HHHHHH
Q 029065 118 AVAPPFDYIIGTDVVYAE------HLL----------------EPLLQTIFALSGPKTTILLGYEIRSTS----VHEQML 171 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~------~~~----------------~~~l~~l~~~l~~~g~i~i~~~~~~~~----~~~~~~ 171 (199)
...+.||+|+++.+.... .+. ..++..+.++|+|||.+++++..-... +...|+
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l 405 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFL 405 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHH
Confidence 123679999986554221 111 578999999999999998877654332 233343
Q ss_pred HHHHhCCeEEEec
Q 029065 172 QMWKSNFNVKLVP 184 (199)
Q Consensus 172 ~~~~~~~~v~~~~ 184 (199)
+.. .+|+...+.
T Consensus 406 ~~~-~~~~~~~~~ 417 (450)
T 2yxl_A 406 NVH-PEFKLVPLK 417 (450)
T ss_dssp HHC-SSCEECCCC
T ss_pred HhC-CCCEEeecc
Confidence 332 246665443
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.15 E-value=2.1e-10 Score=98.47 Aligned_cols=107 Identities=16% Similarity=0.095 Sum_probs=80.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||+|||+|..+..++..+ .+|+++|+++ +++.+++|+..++. .+.+...|....... .
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-------------~~~~~~~D~~~~~~~-~ 311 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-------------KATVKQGDGRYPSQW-C 311 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-------------CCEEEECCTTCTHHH-H
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-------------CeEEEeCchhhchhh-c
Confidence 57899999999999999999875 5799999955 99999999988763 356777666543210 2
Q ss_pred cCCCccEEEEeccccCC------cC----------------hHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 VAPPFDYIIGTDVVYAE------HL----------------LEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~------~~----------------~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..+.||+|+++.+.... .+ ...++..+.++|+|||.+++++..-
T Consensus 312 ~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 312 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 23689999987664321 11 1478888999999999998887543
No 239
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.14 E-value=2.7e-10 Score=90.34 Aligned_cols=101 Identities=8% Similarity=-0.069 Sum_probs=74.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
....+|||||||+|.+++.++ .+.+|+++|++. +++.++.++..++. ...+...|..... .
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~-------------~~~~~v~D~~~~~----~ 165 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDW-------------DFTFALQDVLCAP----P 165 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTC-------------EEEEEECCTTTSC----C
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCC-------------CceEEEeecccCC----C
Confidence 456799999999999999888 566799999955 99999999888863 5677776765332 3
Q ss_pred CCCccEEEEeccccCCc-ChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 120 APPFDYIIGTDVVYAEH-LLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~-~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
.++||+|++..++.+-+ ........+.+.|++++. +++.+
T Consensus 166 ~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~v-vVsfP 206 (253)
T 3frh_A 166 AEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRM-AVSFP 206 (253)
T ss_dssp CCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEE-EEEEE
T ss_pred CCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCE-EEEcC
Confidence 56899999997776622 222233366668888865 55665
No 240
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.14 E-value=1.4e-10 Score=96.96 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=77.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+.+|||||||+|..+..+++. +.+|+++|++.+++.+++ ..++++...|+... .
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~d~~~~--~--- 244 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG------------------SNNLTYVGGDMFTS--I--- 244 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------------------BTTEEEEECCTTTC--C---
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc------------------CCCcEEEeccccCC--C---
Confidence 4579999999999999999976 567999999557665543 12478888777531 1
Q ss_pred CCCccEEEEeccccCCcChH--HHHHHHHHhcCC---CcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGP---KTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~--~~l~~l~~~l~~---~g~i~i~~~~~ 162 (199)
+.||+|++..++++..+.. .+++.+.++|+| ||.+++.+...
T Consensus 245 -p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 245 -PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp -CCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred -CCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 2499999999999877666 999999999999 99999987653
No 241
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.13 E-value=2e-11 Score=99.16 Aligned_cols=120 Identities=12% Similarity=-0.017 Sum_probs=74.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEE--EeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV--ELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|.++..++.. .+|+++|+++++..++++ .. +......++.+. +.|.... .
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~----~~------~~~~~~~~v~~~~~~~D~~~l-----~ 145 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEK----PR------LVETFGWNLITFKSKVDVTKM-----E 145 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCC----CC------CCCCTTGGGEEEECSCCGGGC-----C
T ss_pred CCCEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhc----hh------hhhhcCCCeEEEeccCcHhhC-----C
Confidence 5789999999999999999988 789999996653222111 00 000001156666 6565432 2
Q ss_pred CCCccEEEEeccccCCcCh----H---HHHHHHHHhcCCCc--EEEEEEEecChhHHHHHHHHHHhCC
Q 029065 120 APPFDYIIGTDVVYAEHLL----E---PLLQTIFALSGPKT--TILLGYEIRSTSVHEQMLQMWKSNF 178 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~----~---~~l~~l~~~l~~~g--~i~i~~~~~~~~~~~~~~~~~~~~~ 178 (199)
.++||+|+++.. +....+ . .++..+.++|+||| .+++............+++.+...|
T Consensus 146 ~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~~~f 212 (276)
T 2wa2_A 146 PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQARF 212 (276)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHHHHHH
T ss_pred CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHHHHHc
Confidence 568999999755 332221 1 37888899999999 8877544322221224455555444
No 242
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.12 E-value=3.5e-11 Score=97.24 Aligned_cols=120 Identities=13% Similarity=0.009 Sum_probs=73.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEE--EeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV--ELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|.++..++.. .+|+++|+++++..++++ .. +......++.+. +.|.... .
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~----~~------~~~~~~~~v~~~~~~~D~~~l-----~ 137 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEV----PR------ITESYGWNIVKFKSRVDIHTL-----P 137 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCC----CC------CCCBTTGGGEEEECSCCTTTS-----C
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhh----hh------hhhccCCCeEEEecccCHhHC-----C
Confidence 5789999999999999999988 789999986642222111 00 000001146666 6565432 2
Q ss_pred CCCccEEEEeccccCCcCh----H---HHHHHHHHhcCCCc--EEEEEEEecChhHHHHHHHHHHhCC
Q 029065 120 APPFDYIIGTDVVYAEHLL----E---PLLQTIFALSGPKT--TILLGYEIRSTSVHEQMLQMWKSNF 178 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~----~---~~l~~l~~~l~~~g--~i~i~~~~~~~~~~~~~~~~~~~~~ 178 (199)
.++||+|+++.. +....+ . .++..+.++|+||| .+++............++..+...|
T Consensus 138 ~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f 204 (265)
T 2oxt_A 138 VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKW 204 (265)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHc
Confidence 468999999755 332221 1 37888899999999 8877554322211224455554444
No 243
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.09 E-value=1.5e-10 Score=98.74 Aligned_cols=79 Identities=14% Similarity=0.136 Sum_probs=63.6
Q ss_pred CCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHh--hhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 43 GKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWN--TSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
|.+|||+|||+|..++.+++.+++|+++|+++ +++.|+.|+..+ + ..++++.+.|....... ..
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~g------------l~~i~~i~~Da~~~L~~-~~ 160 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNE------------GKDVNILTGDFKEYLPL-IK 160 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCT------------TCEEEEEESCGGGSHHH-HH
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccC------------CCcEEEEECcHHHhhhh-cc
Confidence 88999999999999999999999999999955 999999999877 5 24788998887643111 11
Q ss_pred CCCccEEEEeccccC
Q 029065 120 APPFDYIIGTDVVYA 134 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~ 134 (199)
.++||+|+++++...
T Consensus 161 ~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 161 TFHPDYIYVDPARRS 175 (410)
T ss_dssp HHCCSEEEECCEEC-
T ss_pred CCCceEEEECCCCcC
Confidence 358999999887754
No 244
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.08 E-value=3.5e-10 Score=90.96 Aligned_cols=81 Identities=19% Similarity=0.062 Sum_probs=61.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeec-h-------hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-I-------EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~-~-------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
++.+|||+|||+|..++.+|..|++|+++|+ + ++++.|++|+..++.. .++++.+.|....
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-----------~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA-----------ARINLHFGNAAEQ 151 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-----------TTEEEEESCHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-----------cCeEEEECCHHHH
Confidence 4579999999999999999999999999998 7 7888888888877642 3588888777532
Q ss_pred ccccccC--CCccEEEEeccccC
Q 029065 114 DHIKAVA--PPFDYIIGTDVVYA 134 (199)
Q Consensus 114 ~~~~~~~--~~fD~Ii~~~~~~~ 134 (199)
.. ...+ ++||+|++++++.+
T Consensus 152 l~-~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 152 MP-ALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HH-HHHHHHCCCSEEEECCCC--
T ss_pred HH-hhhccCCCccEEEECCCCCC
Confidence 11 0112 68999999876644
No 245
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.07 E-value=2e-10 Score=96.71 Aligned_cols=96 Identities=18% Similarity=0.079 Sum_probs=76.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+.+|||||||+|..+..++..+ .+++++|++.+++.+++ ..++++...|+... .
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~d~~~~--~--- 265 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPP------------------LSGIEHVGGDMFAS--V--- 265 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------------------CTTEEEEECCTTTC--C---
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhh------------------cCCCEEEeCCcccC--C---
Confidence 45799999999999999999875 45888898557665542 12578888777541 1
Q ss_pred CCCccEEEEeccccCCcChH--HHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~--~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
+.||+|+++.++++..+.. .+++.+.++|+|||.++|.+..
T Consensus 266 -~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 266 -PQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp -CCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CCCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2399999999999877766 9999999999999999988654
No 246
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.06 E-value=5.1e-10 Score=95.18 Aligned_cols=105 Identities=12% Similarity=0.102 Sum_probs=78.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC----------------------------------------eEEEeechh-HHHHHH
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC----------------------------------------NVITTDQIE-VLPLLK 80 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~----------------------------------------~v~~~D~~~-~l~~a~ 80 (199)
.+..|||.+||+|.+.+.+|..+. +|+++|++. +++.|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 467999999999999999987643 499999954 999999
Q ss_pred HHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCCCccEEEEeccccCC----cChHHHHHHHHHhcCC--CcE
Q 029065 81 RNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAE----HLLEPLLQTIFALSGP--KTT 154 (199)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~----~~~~~~l~~l~~~l~~--~g~ 154 (199)
.|+..++. ...+++.+.|+.+.. ....||+|++++|+... .....+...+.+.|++ |+.
T Consensus 281 ~Na~~~gl-----------~~~I~~~~~D~~~~~----~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 281 QNAVEAGL-----------GDLITFRQLQVADFQ----TEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp HHHHHTTC-----------TTCSEEEECCGGGCC----CCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred HHHHHcCC-----------CCceEEEECChHhCC----CCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 99998874 336888888876432 13589999999886431 3345556666666654 888
Q ss_pred EEEEEEe
Q 029065 155 ILLGYEI 161 (199)
Q Consensus 155 i~i~~~~ 161 (199)
+++....
T Consensus 346 ~~iit~~ 352 (393)
T 3k0b_A 346 VYVLTSY 352 (393)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 8877654
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.06 E-value=5e-10 Score=95.00 Aligned_cols=105 Identities=15% Similarity=0.099 Sum_probs=79.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC----------------------------------------CeEEEeech-hHHHHHH
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG----------------------------------------CNVITTDQI-EVLPLLK 80 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g----------------------------------------~~v~~~D~~-~~l~~a~ 80 (199)
.+..|||.|||+|.+.+.+|..+ .+|+|+|++ .+++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 46799999999999999998764 359999995 4999999
Q ss_pred HHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCCCccEEEEeccccC----CcChHHHHHHHHHhcCC--CcE
Q 029065 81 RNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYA----EHLLEPLLQTIFALSGP--KTT 154 (199)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~----~~~~~~~l~~l~~~l~~--~g~ 154 (199)
.|+..++. ...+++.+.|+.+.. ....||+|++++++.. ......+...+.+.|++ ++.
T Consensus 275 ~Na~~~gl-----------~~~i~~~~~D~~~l~----~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 275 ENAEIAGV-----------DEYIEFNVGDATQFK----SEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp HHHHHHTC-----------GGGEEEEECCGGGCC----CSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred HHHHHcCC-----------CCceEEEECChhhcC----cCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 99998874 236888888876432 1358999999998643 23455666666666665 788
Q ss_pred EEEEEEe
Q 029065 155 ILLGYEI 161 (199)
Q Consensus 155 i~i~~~~ 161 (199)
+++....
T Consensus 340 ~~iit~~ 346 (385)
T 3ldu_A 340 YYLITSY 346 (385)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 7776653
No 248
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.04 E-value=1e-09 Score=93.07 Aligned_cols=105 Identities=10% Similarity=0.074 Sum_probs=80.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC----------------------------------------eEEEeechh-HHHHHH
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC----------------------------------------NVITTDQIE-VLPLLK 80 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~----------------------------------------~v~~~D~~~-~l~~a~ 80 (199)
.+..|||.+||+|.+.+.+|..+. +|+++|++. +++.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 467999999999999999987643 499999954 999999
Q ss_pred HHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCCCccEEEEeccccC----CcChHHHHHHHHHhcCC--CcE
Q 029065 81 RNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYA----EHLLEPLLQTIFALSGP--KTT 154 (199)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~----~~~~~~~l~~l~~~l~~--~g~ 154 (199)
.|+..++. ...+++.+.|+.+.. ....||+|++++|+.. ......+...+-+.|++ |+.
T Consensus 274 ~Na~~~gl-----------~~~I~~~~~D~~~l~----~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 274 KNAREVGL-----------EDVVKLKQMRLQDFK----TNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp HHHHHTTC-----------TTTEEEEECCGGGCC----CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred HHHHHcCC-----------CCceEEEECChHHCC----ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 99998874 346888888876432 1348999999988653 13456677777777765 888
Q ss_pred EEEEEEe
Q 029065 155 ILLGYEI 161 (199)
Q Consensus 155 i~i~~~~ 161 (199)
+++....
T Consensus 339 ~~iit~~ 345 (384)
T 3ldg_A 339 QFILTND 345 (384)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 8887764
No 249
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.03 E-value=5.8e-10 Score=93.86 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=75.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+.+|||||||+|..+..+++. +.+++++|++.+++.++. ..++++...|+.+. . +
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~d~~~~--~--p 260 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPA------------------FSGVEHLGGDMFDG--V--P 260 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------------------CTTEEEEECCTTTC--C--C
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhh------------------cCCCEEEecCCCCC--C--C
Confidence 4579999999999999999875 457999999667655532 13688888887631 1 1
Q ss_pred CCCccEEEEeccccCCc--ChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEH--LLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
. . |+|++..++++.. ....+++.+.++|+|||.++|.+..
T Consensus 261 ~-~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 261 K-G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp C-C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred C-C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 2 3 9999999998654 4568999999999999999998764
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.02 E-value=1.6e-09 Score=93.46 Aligned_cols=106 Identities=13% Similarity=0.008 Sum_probs=78.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---------------CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEE
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---------------GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQA 105 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---------------g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~ 105 (199)
.+.+|||.|||+|.+.+.+++. +.+++|+|++ .+++.|+.|+..++.. ...+.+
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~----------~~~~~i 240 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG----------TDRSPI 240 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC----------SSCCSE
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC----------cCCCCE
Confidence 4679999999999988887753 3579999995 5999999999887631 013456
Q ss_pred EEeeeCCCccccccCCCccEEEEeccccCCcC-----------------hHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 106 VELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL-----------------LEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 106 ~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~~-----------------~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.+.|..... ...+||+|++++|+..... ...+++.+.++|+|||.+.+..+.
T Consensus 241 ~~gD~l~~~----~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 241 VCEDSLEKE----PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp EECCTTTSC----CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred eeCCCCCCc----ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 666654322 1248999999999865321 137899999999999999888774
No 251
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.02 E-value=8.2e-10 Score=82.98 Aligned_cols=110 Identities=12% Similarity=0.071 Sum_probs=78.8
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
-+|.+|||||||. +.+|+++ |++.|+++... ++++...|..+.......
T Consensus 11 ~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~----------------~~~~~~~d~~~~~~~~~~ 60 (176)
T 2ld4_A 11 SAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN----------------EGRVSVENIKQLLQSAHK 60 (176)
T ss_dssp CTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT----------------TSEEEEEEGGGGGGGCCC
T ss_pred CCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc----------------CcEEEEechhcCccccCC
Confidence 3578999999996 2389855 99998876421 357777777643221114
Q ss_pred CCCccEEEEeccccCC-cChHHHHHHHHHhcCCCcEEEEEEEecCh-------hHHHHHHHHHH-hCCeEE
Q 029065 120 APPFDYIIGTDVVYAE-HLLEPLLQTIFALSGPKTTILLGYEIRST-------SVHEQMLQMWK-SNFNVK 181 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~-~~~~~~l~~l~~~l~~~g~i~i~~~~~~~-------~~~~~~~~~~~-~~~~v~ 181 (199)
.+.||+|+++.++++. .+...+++.+.++|+|||.+++..+.... ...+.+.+.+. .|| +.
T Consensus 61 ~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp SSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred CCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 6789999999999887 88999999999999999999997663221 01345555553 578 54
No 252
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.01 E-value=5.8e-10 Score=93.30 Aligned_cols=96 Identities=14% Similarity=0.024 Sum_probs=75.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--CeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--CNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+.+|||||||+|..+..+++.. .+++++|++.+++.+++ ..++++...|+.. .
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~d~~~-~----- 248 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------------------NENLNFVGGDMFK-S----- 248 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------------------CSSEEEEECCTTT-C-----
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------------------CCCcEEEeCccCC-C-----
Confidence 35799999999999999999874 46999998666654432 1247888877753 1
Q ss_pred CCCccEEEEeccccCCcChH--HHHHHHHHhcCC---CcEEEEEEEe
Q 029065 120 APPFDYIIGTDVVYAEHLLE--PLLQTIFALSGP---KTTILLGYEI 161 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~--~~l~~l~~~l~~---~g~i~i~~~~ 161 (199)
.+.||+|+++.++++..+.. .+++.+.++|+| ||.++|.+..
T Consensus 249 ~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 249 IPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp CCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred CCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 12599999999999877755 999999999999 9999988754
No 253
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.01 E-value=1.9e-09 Score=87.24 Aligned_cols=108 Identities=13% Similarity=0.074 Sum_probs=77.2
Q ss_pred CcEEEeCCCc---ChHHHHHHh--hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc-
Q 029065 44 KRVIELGAGC---GVAGFGMAL--LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI- 116 (199)
Q Consensus 44 ~~VLdlGcG~---G~~sl~la~--~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~- 116 (199)
..|||||||+ |.....+.+ .+++|+++|.+ .|+..++..+.... ..++.+.+.|+.+....
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~------------~~~~~~v~aD~~~~~~~l 147 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP------------EGRTAYVEADMLDPASIL 147 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS------------SSEEEEEECCTTCHHHHH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC------------CCcEEEEEecccChhhhh
Confidence 5899999997 444443333 26789999995 59999988764331 23688999888754210
Q ss_pred --cccCCCcc-----EEEEeccccCCcC---hHHHHHHHHHhcCCCcEEEEEEEecC
Q 029065 117 --KAVAPPFD-----YIIGTDVVYAEHL---LEPLLQTIFALSGPKTTILLGYEIRS 163 (199)
Q Consensus 117 --~~~~~~fD-----~Ii~~~~~~~~~~---~~~~l~~l~~~l~~~g~i~i~~~~~~ 163 (199)
......|| .|+++.++++..+ +..+++.+.+.|+|||.++++.....
T Consensus 148 ~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 148 DAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 00012344 5788899998666 56899999999999999999987653
No 254
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.01 E-value=3.1e-10 Score=93.45 Aligned_cols=115 Identities=11% Similarity=-0.069 Sum_probs=70.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeec----hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEe-eeCCCcc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ----IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVEL-DWGNEDH 115 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~----~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~ 115 (199)
++.+|||||||+|.++..++.. .+|+++|+ +. .++.+. .. + .....+.+... |....
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~----~~--------~--~~~~~v~~~~~~D~~~l-- 144 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP----MS--------T--YGWNLVRLQSGVDVFFI-- 144 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC----CC--------S--TTGGGEEEECSCCTTTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH----hh--------h--cCCCCeEEEeccccccC--
Confidence 4789999999999999999988 68999998 22 221100 00 0 00135677665 54322
Q ss_pred ccccCCCccEEEEecccc---CCcChH---HHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHh
Q 029065 116 IKAVAPPFDYIIGTDVVY---AEHLLE---PLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKS 176 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~---~~~~~~---~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~ 176 (199)
...+||+|+++..+. +..+.. .++..+.++|+|||.+++............++..+..
T Consensus 145 ---~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~ 208 (305)
T 2p41_A 145 ---PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQR 208 (305)
T ss_dssp ---CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHH
T ss_pred ---CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHH
Confidence 245899999965432 111111 4678888999999987774433222223445555543
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.00 E-value=1.1e-09 Score=93.07 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=72.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
++.+|||+|||+|.+++.++.. +.+|+|+|+++ +++.| .++++.+.|+....
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------------~~~~~~~~D~~~~~--- 94 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------------PWAEGILADFLLWE--- 94 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------------TTEEEEESCGGGCC---
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------------CCCcEEeCChhhcC---
Confidence 4569999999999999999864 46799999954 66554 15677777765332
Q ss_pred ccCCCccEEEEeccccCCcC-----------------------------hHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 118 AVAPPFDYIIGTDVVYAEHL-----------------------------LEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~-----------------------------~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
..++||+|++++|+..... ...+++.+.++|+|+|.+.+..+..
T Consensus 95 -~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 95 -PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp -CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred -ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 2468999999998865322 1266888899999999998888763
No 256
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.99 E-value=9.3e-10 Score=92.53 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=76.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+.+|||||||+|..+..+++. +.+++++|++.+++.++. ..++++...|+.. . . +
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------------------~~~v~~~~~D~~~-~-~--p 258 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQ------------------FPGVTHVGGDMFK-E-V--P 258 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC------------------CTTEEEEECCTTT-C-C--C
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhh------------------cCCeEEEeCCcCC-C-C--C
Confidence 4579999999999999999875 457999999667655532 1378998888764 1 1 1
Q ss_pred CCCccEEEEeccccCC--cChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAE--HLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~--~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
. . |+|++..++++. .....+++.+.+.|+|||.++|.+...
T Consensus 259 ~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 259 S-G-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp C-C-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred C-C-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 2 3 999999999865 456789999999999999999987653
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.99 E-value=1.5e-09 Score=88.84 Aligned_cols=77 Identities=18% Similarity=0.128 Sum_probs=62.0
Q ss_pred CCCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.++.+|||||||+|.++..++..+.+|+++|++ .+++.+++++.. ..++++.+.|+.... ..
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~--------------~~~v~vi~gD~l~~~---~~ 111 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL--------------YNNIEIIWGDALKVD---LN 111 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH--------------CSSEEEEESCTTTSC---GG
T ss_pred CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc--------------CCCeEEEECchhhCC---cc
Confidence 357799999999999999999999999999995 499999998762 347899988876543 22
Q ss_pred CCCccEEEEeccccC
Q 029065 120 APPFDYIIGTDVVYA 134 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~ 134 (199)
...||.|+++.+++.
T Consensus 112 ~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 112 KLDFNKVVANLPYQI 126 (295)
T ss_dssp GSCCSEEEEECCGGG
T ss_pred cCCccEEEEeCcccc
Confidence 347999999977654
No 258
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.98 E-value=4e-10 Score=95.61 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=73.6
Q ss_pred CCCCCCCcEEEeCCC------cChHHHHHHhh---CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEE
Q 029065 38 PSKLKGKRVIELGAG------CGVAGFGMALL---GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVE 107 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG------~G~~sl~la~~---g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 107 (199)
+...++.+||||||| +|-.++.+++. +++|+++|+++ +. .. ..++++.+
T Consensus 212 ~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~-------------~~rI~fv~ 270 (419)
T 3sso_A 212 DYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD-------------ELRIRTIQ 270 (419)
T ss_dssp GGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC-------------BTTEEEEE
T ss_pred hhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc-------------CCCcEEEE
Confidence 334467899999999 66667766653 67899999965 51 11 34789998
Q ss_pred eeeCCCccc---cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 108 LDWGNEDHI---KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 108 ~d~~~~~~~---~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
.|..+.... ....++||+|+++.. ++..+...+++.+.++|+|||.+++.+..
T Consensus 271 GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 271 GDQNDAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CCTTCHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ecccccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 887643211 011478999998654 44567888999999999999999998654
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.97 E-value=9.6e-10 Score=88.28 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc-
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV- 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~- 119 (199)
++.+|||||||+|.++..++..+++|+++|++ .+++.+++++... .++++.+.|....+.....
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~--------------~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ--------------KNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC--------------TTEEEEESCTTTCCGGGSCC
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC--------------CCcEEEEcchHhCCHHHhcc
Confidence 56799999999999999999999999999995 4999998886431 3688888888665422211
Q ss_pred CCCccEEEEeccccC
Q 029065 120 APPFDYIIGTDVVYA 134 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~ 134 (199)
.++|| |++|.+++-
T Consensus 95 ~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 95 DKPLR-VVGNLPYNI 108 (255)
T ss_dssp SSCEE-EEEECCHHH
T ss_pred CCCeE-EEecCCccc
Confidence 35688 888877643
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.94 E-value=1.1e-08 Score=84.21 Aligned_cols=79 Identities=16% Similarity=0.096 Sum_probs=60.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
+|.+|||+|||+|..++.++.. ..+|+++|++ .+++.+++|+..++. .++++...|+.......
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------------~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------------SCCELAEEDFLAVSPSD 169 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEECCGGGSCTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------------CeEEEEeCChHhcCccc
Confidence 5789999999999999999864 3579999995 499999999998873 46888888775432111
Q ss_pred ccCCCccEEEEeccc
Q 029065 118 AVAPPFDYIIGTDVV 132 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~ 132 (199)
.....||.|++..+.
T Consensus 170 ~~~~~fD~Vl~D~Pc 184 (309)
T 2b9e_A 170 PRYHEVHYILLDPSC 184 (309)
T ss_dssp GGGTTEEEEEECCCC
T ss_pred cccCCCCEEEEcCCc
Confidence 111479999987554
No 261
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.94 E-value=2.5e-09 Score=85.12 Aligned_cols=75 Identities=12% Similarity=0.062 Sum_probs=55.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|.++..++..+.+|+++|++. +++.+++++.. ..++++.+.|+...... ..
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~--------------~~~v~~~~~D~~~~~~~--~~ 93 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD--------------HDNFQVLNKDILQFKFP--KN 93 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT--------------CCSEEEECCCGGGCCCC--SS
T ss_pred CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc--------------CCCeEEEEChHHhCCcc--cC
Confidence 577999999999999999999999999999954 99998887642 23688888777543211 12
Q ss_pred CCccEEEEecccc
Q 029065 121 PPFDYIIGTDVVY 133 (199)
Q Consensus 121 ~~fD~Ii~~~~~~ 133 (199)
..| .|+++.+++
T Consensus 94 ~~~-~vv~nlPy~ 105 (244)
T 1qam_A 94 QSY-KIFGNIPYN 105 (244)
T ss_dssp CCC-EEEEECCGG
T ss_pred CCe-EEEEeCCcc
Confidence 345 577776654
No 262
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.91 E-value=2.5e-09 Score=89.60 Aligned_cols=132 Identities=15% Similarity=0.034 Sum_probs=82.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC-eEEEeech-hHHHHHHHHHHHhhh-ccccCCCCCCCCCcEEEEEeeeCCCccc-c
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC-NVITTDQI-EVLPLLKRNVEWNTS-RISQMNPGSDLLGSIQAVELDWGNEDHI-K 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~-~v~~~D~~-~~l~~a~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~ 117 (199)
++++||+||||+|..+..+++.++ +|+++|++ .+++.|++++...+. .. ..| ...++++...|....... .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l--~dp---~~~rv~vi~~Da~~~L~~~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVL--DNL---KGDCYQVLIEDCIPVLKRYA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CC--SSS---EETTEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccc--ccc---CCCcEEEEECcHHHHHHhhh
Confidence 578999999999999998887765 59999995 599999998642210 00 000 012678887776432110 0
Q ss_pred ccCCCccEEEEeccc--cC--Cc--ChHHHHHHH----HHhcCCCcEEEEEEEecCh-hHHHHHHHHHHhCC
Q 029065 118 AVAPPFDYIIGTDVV--YA--EH--LLEPLLQTI----FALSGPKTTILLGYEIRST-SVHEQMLQMWKSNF 178 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~--~~--~~--~~~~~l~~l----~~~l~~~g~i~i~~~~~~~-~~~~~~~~~~~~~~ 178 (199)
...++||+|++..+- .. +. .-..+++.+ .++|+|||.+++....... +....+.+.+.+.|
T Consensus 263 ~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F 334 (364)
T 2qfm_A 263 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLY 334 (364)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSS
T ss_pred ccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhC
Confidence 125689999997532 11 11 224555655 8999999998877665443 22333333355555
No 263
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.89 E-value=2.2e-11 Score=96.90 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=56.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++.+|||+|||+|.++..++..+.+|+++|+++ +++.+++++.. ..++++.+.|+.+... ...
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~--------------~~~v~~~~~D~~~~~~--~~~ 92 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL--------------NTRVTLIHQDILQFQF--PNK 92 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT--------------CSEEEECCSCCTTTTC--CCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc--------------CCceEEEECChhhcCc--ccC
Confidence 567999999999999999999998999999955 87777766531 2367888877764431 112
Q ss_pred CCccEEEEeccccC
Q 029065 121 PPFDYIIGTDVVYA 134 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~ 134 (199)
++| .|+++.+++.
T Consensus 93 ~~f-~vv~n~Py~~ 105 (245)
T 1yub_A 93 QRY-KIVGNIPYHL 105 (245)
T ss_dssp SEE-EEEEECCSSS
T ss_pred CCc-EEEEeCCccc
Confidence 568 7888877654
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.89 E-value=3.3e-09 Score=85.88 Aligned_cols=76 Identities=17% Similarity=0.135 Sum_probs=59.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
++ +|||||||+|.++..++..+++|+++|+++ +++.+++++.. .++++.+.|....+.. ..
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~---------------~~v~vi~~D~l~~~~~--~~ 108 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG---------------LPVRLVFQDALLYPWE--EV 108 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT---------------SSEEEEESCGGGSCGG--GS
T ss_pred CC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC---------------CCEEEEECChhhCChh--hc
Confidence 46 999999999999999999999999999954 99999887642 2688888887644321 11
Q ss_pred CCccEEEEeccccCC
Q 029065 121 PPFDYIIGTDVVYAE 135 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~ 135 (199)
..+|.|++|.+++-.
T Consensus 109 ~~~~~iv~NlPy~is 123 (271)
T 3fut_A 109 PQGSLLVANLPYHIA 123 (271)
T ss_dssp CTTEEEEEEECSSCC
T ss_pred cCccEEEecCccccc
Confidence 368999999876553
No 265
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.84 E-value=6.1e-09 Score=83.71 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=57.4
Q ss_pred CcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCC-CCCcEEEEEeeeCCCccccccCC
Q 029065 44 KRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSD-LLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
.+|||+|||+|..++.+|..|++|+++|.++ +...++.++....... ..++ ...++++.+.|..+. +.....
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~----~~~~~l~~~i~~~~~D~~~~--L~~~~~ 163 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADA----EIGGWLQERLQLIHASSLTA--LTDITP 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCT----TTHHHHHHHEEEEESCHHHH--STTCSS
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhH----hhhhhhhcCEEEEECCHHHH--HHhCcc
Confidence 7999999999999999999999999999954 7777776664322100 0000 013678888776432 111224
Q ss_pred CccEEEEeccccC
Q 029065 122 PFDYIIGTDVVYA 134 (199)
Q Consensus 122 ~fD~Ii~~~~~~~ 134 (199)
.||+|++++++.+
T Consensus 164 ~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 164 RPQVVYLDPMFPH 176 (258)
T ss_dssp CCSEEEECCCCCC
T ss_pred cCCEEEEcCCCCC
Confidence 7999999876644
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.84 E-value=1.1e-08 Score=90.24 Aligned_cols=130 Identities=8% Similarity=-0.120 Sum_probs=84.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--------------------CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--------------------GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLL 100 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--------------------g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~ 100 (199)
.+.+|||.+||+|.+.+.++.. ...++|+|++ .+++.|+.|+..++.... + .
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~---~----~ 241 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGN---L----D 241 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCB---G----G
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCcc---c----c
Confidence 4679999999999887777643 1369999995 499999999887763200 0 0
Q ss_pred CcEEEEEeeeCCCccccccCCCccEEEEeccccCCcC--------------hHHHHHHHHHhcCCCcEEEEEEEec---C
Q 029065 101 GSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL--------------LEPLLQTIFALSGPKTTILLGYEIR---S 163 (199)
Q Consensus 101 ~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~~--------------~~~~l~~l~~~l~~~g~i~i~~~~~---~ 163 (199)
..+.+.+.|..... ....++||+|++++|+..... ...++..+.++|+|+|.+.+..+.. .
T Consensus 242 ~~~~I~~gDtL~~~--~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~ 319 (541)
T 2ar0_A 242 HGGAIRLGNTLGSD--GENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFE 319 (541)
T ss_dssp GTBSEEESCTTSHH--HHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHC
T ss_pred ccCCeEeCCCcccc--cccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceec
Confidence 01455555533211 112468999999999755322 2368899999999999988887753 1
Q ss_pred hhHHHHHHHHHHhCCeE
Q 029065 164 TSVHEQMLQMWKSNFNV 180 (199)
Q Consensus 164 ~~~~~~~~~~~~~~~~v 180 (199)
......+.+.+.+.+.+
T Consensus 320 ~~~~~~iR~~L~~~~~l 336 (541)
T 2ar0_A 320 GGKGTDIRRDLMDKCHL 336 (541)
T ss_dssp CTHHHHHHHHHHHHEEE
T ss_pred CcHHHHHHHHHhhcCCE
Confidence 11234455555443333
No 267
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.80 E-value=6.2e-08 Score=85.49 Aligned_cols=131 Identities=9% Similarity=-0.027 Sum_probs=89.5
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-----CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-----GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-----g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+.+|||.+||+|.+.+.+++. ...++|+|++ .++..|+.|+..++.. ...+.+.+.|....+
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----------~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP----------IENQFLHNADTLDED 289 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC----------GGGEEEEESCTTTSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC----------cCccceEecceeccc
Confidence 35679999999999877776654 4569999995 4999999999888642 135667776654331
Q ss_pred cccccCCCccEEEEeccccCCc--------C---------------hHHHHHHHHHhcC-CCcEEEEEEEecC---hhHH
Q 029065 115 HIKAVAPPFDYIIGTDVVYAEH--------L---------------LEPLLQTIFALSG-PKTTILLGYEIRS---TSVH 167 (199)
Q Consensus 115 ~~~~~~~~fD~Ii~~~~~~~~~--------~---------------~~~~l~~l~~~l~-~~g~i~i~~~~~~---~~~~ 167 (199)
.......+||+|++|+|+.... + --.++..+.++|+ ++|++.+..+..- ....
T Consensus 290 ~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~ 369 (542)
T 3lkd_A 290 WPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAE 369 (542)
T ss_dssp SCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHH
T ss_pred ccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchh
Confidence 1112346899999999984311 0 0137889999999 9999888877531 1224
Q ss_pred HHHHHHHHhCCeEE
Q 029065 168 EQMLQMWKSNFNVK 181 (199)
Q Consensus 168 ~~~~~~~~~~~~v~ 181 (199)
..+.+.+...+.+.
T Consensus 370 ~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 370 GTIRKALLEEGAID 383 (542)
T ss_dssp HHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCcee
Confidence 55666665555543
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.79 E-value=7e-09 Score=92.70 Aligned_cols=103 Identities=12% Similarity=-0.010 Sum_probs=75.3
Q ss_pred CCCCCCCCcEEEeCCCcChHHHHHHh---hCC---eEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeee
Q 029065 37 CPSKLKGKRVIELGAGCGVAGFGMAL---LGC---NVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDW 110 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~~sl~la~---~g~---~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 110 (199)
+....+++.|||+|||+|.++..+++ .++ +|+++|-+++...+++.+..|+. .++|++.+.|.
T Consensus 352 ~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~-----------~dkVtVI~gd~ 420 (637)
T 4gqb_A 352 EEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEW-----------GSQVTVVSSDM 420 (637)
T ss_dssp GGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTT-----------GGGEEEEESCT
T ss_pred ccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccC-----------CCeEEEEeCcc
Confidence 33445667999999999998554444 332 48999987777788888888864 56899999888
Q ss_pred CCCccccccCCCccEEEEeccccC--CcChHHHHHHHHHhcCCCcE
Q 029065 111 GNEDHIKAVAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTT 154 (199)
Q Consensus 111 ~~~~~~~~~~~~fD~Ii~~~~~~~--~~~~~~~l~~l~~~l~~~g~ 154 (199)
++.+ ..+++|+||+--+-|. .+....++....++|+|||.
T Consensus 421 eev~----LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGi 462 (637)
T 4gqb_A 421 REWV----APEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGV 462 (637)
T ss_dssp TTCC----CSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEE
T ss_pred eecc----CCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcE
Confidence 7553 2368999987533332 23344788899999999885
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.78 E-value=2.2e-08 Score=90.91 Aligned_cols=107 Identities=14% Similarity=0.052 Sum_probs=77.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC--------------------------------------------CeEEEeech-hHH
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG--------------------------------------------CNVITTDQI-EVL 76 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g--------------------------------------------~~v~~~D~~-~~l 76 (199)
.+..|||.+||+|.+.+.+|..+ .+|+|+|++ .++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 46799999999999999888653 469999995 599
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCCCccEEEEeccccC----CcChHHHHHHHHHhc---
Q 029065 77 PLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYA----EHLLEPLLQTIFALS--- 149 (199)
Q Consensus 77 ~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~----~~~~~~~l~~l~~~l--- 149 (199)
+.|+.|+..++. ...+++.+.|..+... +...+.||+|++|+|+.. ......+.+.+.+.+
T Consensus 270 ~~A~~N~~~agv-----------~~~i~~~~~D~~~~~~-~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 270 QRARTNARLAGI-----------GELITFEVKDVAQLTN-PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp HHHHHHHHHTTC-----------GGGEEEEECCGGGCCC-SCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-----------CCceEEEECChhhCcc-ccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 999999999875 2358888888764321 111238999999998643 223455555554443
Q ss_pred CCCcEEEEEEE
Q 029065 150 GPKTTILLGYE 160 (199)
Q Consensus 150 ~~~g~i~i~~~ 160 (199)
.|||.+++...
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 47998887754
No 270
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.69 E-value=3.7e-08 Score=80.02 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=56.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCe----EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCN----VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~----v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++.+|||||||+|.++..++..+.+ |+++|+++ +++.++++. .. ++++.+.|....+..
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~~--------------~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--GE--------------LLELHAGDALTFDFG 105 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--GG--------------GEEEEESCGGGCCGG
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--CC--------------CcEEEECChhcCChh
Confidence 5779999999999999999988877 99999954 999998883 21 678888887655422
Q ss_pred cccC-C--CccEEEEeccccC
Q 029065 117 KAVA-P--PFDYIIGTDVVYA 134 (199)
Q Consensus 117 ~~~~-~--~fD~Ii~~~~~~~ 134 (199)
.... . ....|++|.+++-
T Consensus 106 ~~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 106 SIARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp GGSCSSSSCCEEEEEECCHHH
T ss_pred HhcccccCCceEEEEccCccc
Confidence 2111 1 3456888876543
No 271
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.69 E-value=2.5e-07 Score=84.39 Aligned_cols=133 Identities=11% Similarity=-0.008 Sum_probs=85.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC-----CeEEEeech-hHHHHH--HHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG-----CNVITTDQI-EVLPLL--KRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g-----~~v~~~D~~-~~l~~a--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
++.+|||.|||+|.+.+.++... .+++|+|++ .+++.| +.|+..|...+ ......+...|+...
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Llh--------Gi~~~~I~~dD~L~~ 392 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVS--------SNNAPTITGEDVCSL 392 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCB--------TTBCCEEECCCGGGC
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhc--------CCCcceEEecchhcc
Confidence 57799999999999998888653 359999995 488888 66655543211 011123333333221
Q ss_pred ccccccCCCccEEEEeccccCCc-----------------------------ChHHHHHHHHHhcCCCcEEEEEEEecCh
Q 029065 114 DHIKAVAPPFDYIIGTDVVYAEH-----------------------------LLEPLLQTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 114 ~~~~~~~~~fD~Ii~~~~~~~~~-----------------------------~~~~~l~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
. ....+.||+||+|+|+.... ....++..+.++|+++|.+.+..+..--
T Consensus 393 ~--~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 393 N--PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYL 470 (878)
T ss_dssp C--GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHH
T ss_pred c--ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHh
Confidence 1 12246899999999984311 1344778888999999999888886321
Q ss_pred ----hHHHHHHHHHHhCCeEEEec
Q 029065 165 ----SVHEQMLQMWKSNFNVKLVP 184 (199)
Q Consensus 165 ----~~~~~~~~~~~~~~~v~~~~ 184 (199)
.....+.+.+.+.+.+..+-
T Consensus 471 f~sg~~~kkLRk~LLe~~~I~aII 494 (878)
T 3s1s_A 471 TAQGNESKAFREFLVGNFGLEHIF 494 (878)
T ss_dssp HCCSHHHHHHHHHHTTTTCEEEEE
T ss_pred ccCChHHHHHHHHHHhCCCeEEEE
Confidence 12455666666666665443
No 272
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.69 E-value=4.1e-08 Score=80.16 Aligned_cols=107 Identities=20% Similarity=0.181 Sum_probs=68.4
Q ss_pred CCCCcEEEeCCCc------ChHHHHHH-hh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEE-EEeee
Q 029065 41 LKGKRVIELGAGC------GVAGFGMA-LL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQA-VELDW 110 (199)
Q Consensus 41 ~~~~~VLdlGcG~------G~~sl~la-~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~d~ 110 (199)
-++.+|||||||+ |. ..++ .. +++|+++|+++. + . ++++ .+.|+
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v--~---------------~v~~~i~gD~ 115 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------V--S---------------DADSTLIGDC 115 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------B--C---------------SSSEEEESCG
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------C--C---------------CCEEEEECcc
Confidence 3578999999944 65 3344 33 367999998654 0 1 3566 77777
Q ss_pred CCCccccccCCCccEEEEeccccC-----------CcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHh-CC
Q 029065 111 GNEDHIKAVAPPFDYIIGTDVVYA-----------EHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKS-NF 178 (199)
Q Consensus 111 ~~~~~~~~~~~~fD~Ii~~~~~~~-----------~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~-~~ 178 (199)
.... ..+.||+|+++..... ...+..+++.+.++|+|||.+++........ +.+.+.+.. +|
T Consensus 116 ~~~~----~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~--~~l~~~l~~~GF 189 (290)
T 2xyq_A 116 ATVH----TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMGHFSW 189 (290)
T ss_dssp GGCC----CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHTTEEE
T ss_pred ccCC----ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH--HHHHHHHHHcCC
Confidence 5332 1368999999743211 1234588999999999999998866433221 345555544 36
Q ss_pred e
Q 029065 179 N 179 (199)
Q Consensus 179 ~ 179 (199)
.
T Consensus 190 ~ 190 (290)
T 2xyq_A 190 W 190 (290)
T ss_dssp E
T ss_pred c
Confidence 4
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.62 E-value=1.1e-07 Score=75.93 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=53.5
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC-CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG-CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g-~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
++.+|||||||+|.++..++..| .+|+++|++. +++.++++ . ..++++.+.|....+....
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~-------------~~~v~~i~~D~~~~~~~~~- 93 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---G-------------DERLEVINEDASKFPFCSL- 93 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---C-------------CTTEEEECSCTTTCCGGGS-
T ss_pred CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---c-------------CCCeEEEEcchhhCChhHc-
Confidence 57799999999999999999986 7899999955 88888766 1 2367888888765432211
Q ss_pred CCCccEEEEecccc
Q 029065 120 APPFDYIIGTDVVY 133 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~ 133 (199)
.+.| .|+++.+++
T Consensus 94 ~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 94 GKEL-KVVGNLPYN 106 (249)
T ss_dssp CSSE-EEEEECCTT
T ss_pred cCCc-EEEEECchh
Confidence 1233 667766653
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.59 E-value=2.3e-08 Score=80.04 Aligned_cols=77 Identities=10% Similarity=-0.012 Sum_probs=53.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCe--EEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCN--VITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~--v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
++.+|||||||+|.++. +++ +.+ |+++|++ .+++.+++++... .++++.+.|....+....
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~--------------~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG--------------PKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG--------------GGEEEECSCGGGCCHHHH
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC--------------CceEEEECchhhCCHHHh
Confidence 46799999999999999 765 677 9999995 5999888765432 267888888765432111
Q ss_pred c--CCCccEEEEeccccC
Q 029065 119 V--APPFDYIIGTDVVYA 134 (199)
Q Consensus 119 ~--~~~fD~Ii~~~~~~~ 134 (199)
. .+..+.|++|.+++-
T Consensus 85 ~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 85 AEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp HHHHTSCEEEEEECCTTT
T ss_pred hcccCCceEEEECCCCCc
Confidence 0 124578888877643
No 275
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.59 E-value=6.2e-08 Score=79.47 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=58.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~ 117 (199)
++.+|||+|||+|..++.++.. +.+|+++|.+ .+++.|++++..++ .++++.+.|+.+... ..
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-------------~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-------------DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-------------TTEEEEECCGGGHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEECCHHHHHHHHH
Confidence 5679999999999999999987 4789999995 49999999987653 378898888754321 11
Q ss_pred c-cCCCccEEEEecc
Q 029065 118 A-VAPPFDYIIGTDV 131 (199)
Q Consensus 118 ~-~~~~fD~Ii~~~~ 131 (199)
. ...+||.|+++.+
T Consensus 93 ~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 93 TLGIEKVDGILMDLG 107 (301)
T ss_dssp HTTCSCEEEEEEECS
T ss_pred hcCCCCCCEEEEcCc
Confidence 1 1157999998754
No 276
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.59 E-value=1e-06 Score=68.15 Aligned_cols=131 Identities=15% Similarity=0.025 Sum_probs=83.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc-----
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED----- 114 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----- 114 (199)
..++|||+||| .-++.+|+. +.+|+.+|.+ +..+.|++++..++.. ..+++++...|.....
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~---------~~~~I~~~~gda~~~~~wg~p 98 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA---------EGTEVNIVWTDIGPTGDWGHP 98 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC---------TTCEEEEEECCCSSBCGGGCB
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC---------CCCceEEEEeCchhhhccccc
Confidence 45799999985 568888876 6889999984 5889999999887530 0246888877754320
Q ss_pred -------ccc--------c-cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE-ecC-hhHHHHHHHHHH-
Q 029065 115 -------HIK--------A-VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE-IRS-TSVHEQMLQMWK- 175 (199)
Q Consensus 115 -------~~~--------~-~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~-~~~-~~~~~~~~~~~~- 175 (199)
... . ..++||+|+...- .....+..+.++|+|||.+++-.- .|. ......|+....
T Consensus 99 ~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DNv~~r~~y~~v~~~~~~~~~ 173 (202)
T 3cvo_A 99 VSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDDYSQRRWQHQVEEFLGAPLM 173 (202)
T ss_dssp SSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETTGGGCSSGGGGHHHHCCCEE
T ss_pred ccchhhhhHHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeCCcCCcchHHHHHHHhHHhh
Confidence 011 1 1368999998763 223556667789999998855432 232 223445555332
Q ss_pred -hCCeEEEecCCCc
Q 029065 176 -SNFNVKLVPKAKE 188 (199)
Q Consensus 176 -~~~~v~~~~~~~~ 188 (199)
....+..+.+...
T Consensus 174 ~~~~a~f~~~p~~~ 187 (202)
T 3cvo_A 174 IGRLAAFQVEPQPI 187 (202)
T ss_dssp ETTEEEEEECCCCC
T ss_pred cCceEEEEeCCCCC
Confidence 2345555555443
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.55 E-value=3e-07 Score=81.20 Aligned_cols=124 Identities=11% Similarity=0.010 Sum_probs=81.4
Q ss_pred cEEEeCCCcChHHHHHHhh-----------------CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEE
Q 029065 45 RVIELGAGCGVAGFGMALL-----------------GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV 106 (199)
Q Consensus 45 ~VLdlGcG~G~~sl~la~~-----------------g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~ 106 (199)
+|||.+||+|.+.+.++.. ...++|+|++ .++..|+.|+..++.. ..+.+.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-----------~~i~i~ 315 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID-----------FNFGKK 315 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC-----------CBCCSS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC-----------ccccee
Confidence 8999999999776666432 3469999995 5999999999888642 122223
Q ss_pred EeeeCCCccccccCCCccEEEEeccccCCc-----------------------C------hHHHHHHHHHhcCCCcEEEE
Q 029065 107 ELDWGNEDHIKAVAPPFDYIIGTDVVYAEH-----------------------L------LEPLLQTIFALSGPKTTILL 157 (199)
Q Consensus 107 ~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~-----------------------~------~~~~l~~l~~~l~~~g~i~i 157 (199)
+.|..... .....+||+|++|+|+.... . --.++..+.++|+|+|.+.+
T Consensus 316 ~gDtL~~~--~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 316 NADSFLDD--QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp SCCTTTSC--SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEE
T ss_pred ccchhcCc--ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEE
Confidence 33322111 11246899999999985321 0 01588899999999999888
Q ss_pred EEEec----ChhHHHHHHHHHHhCCeEE
Q 029065 158 GYEIR----STSVHEQMLQMWKSNFNVK 181 (199)
Q Consensus 158 ~~~~~----~~~~~~~~~~~~~~~~~v~ 181 (199)
..+.. .......+.+.+...+.+.
T Consensus 394 VlP~g~L~~~~~~~~~iRk~Lle~~~l~ 421 (544)
T 3khk_A 394 LLANGSMSSNTNNEGEIRKTLVEQDLVE 421 (544)
T ss_dssp EEETHHHHCCGGGHHHHHHHHHHTTCEE
T ss_pred EecchhhhcCcchHHHHHHHHHhCCcHh
Confidence 87742 2123456666665555443
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.54 E-value=1.2e-07 Score=85.25 Aligned_cols=100 Identities=17% Similarity=0.100 Sum_probs=67.3
Q ss_pred CCcEEEeCCCcChHHHHH---Hh-hC---------C--eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEE
Q 029065 43 GKRVIELGAGCGVAGFGM---AL-LG---------C--NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV 106 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~l---a~-~g---------~--~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~ 106 (199)
++.|||+|||+|.++..+ +. .+ . +|+++|-+. +...++.... |+. .++|++.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~-----------~d~VtVI 477 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW-----------KRRVTII 477 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT-----------TTCSEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC-----------CCeEEEE
Confidence 468999999999987543 32 23 2 699999854 4444444333 543 5679999
Q ss_pred EeeeCCCccc--cccCCCccEEEEeccccC--CcChHHHHHHHHHhcCCCcE
Q 029065 107 ELDWGNEDHI--KAVAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTT 154 (199)
Q Consensus 107 ~~d~~~~~~~--~~~~~~fD~Ii~~~~~~~--~~~~~~~l~~l~~~l~~~g~ 154 (199)
..|.++.... ....++.|+||+--+-|. .+.....+....++|+|+|.
T Consensus 478 ~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi 529 (745)
T 3ua3_A 478 ESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTI 529 (745)
T ss_dssp ESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCE
T ss_pred eCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcE
Confidence 9887654321 011468999998755443 44566788888899999985
No 279
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.44 E-value=1.3e-07 Score=76.49 Aligned_cols=120 Identities=8% Similarity=-0.025 Sum_probs=90.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC-cccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-DHIKAV 119 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~ 119 (199)
.+..+||+-+|||.+++.+.+.+.+++++|. +..++..++|+... .++++.+.|.... ......
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~--------------~~~~V~~~D~~~~L~~l~~~ 156 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN--------------KKVYVNHTDGVSKLNALLPP 156 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT--------------SCEEEECSCHHHHHHHHCSC
T ss_pred cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC--------------CcEEEEeCcHHHHHHHhcCC
Confidence 4678999999999999999997777999998 55888887776432 3677777664221 111122
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHh--cCCCcEEEEEEEecChhHHHHHHHHHH
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFAL--SGPKTTILLGYEIRSTSVHEQMLQMWK 175 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~--l~~~g~i~i~~~~~~~~~~~~~~~~~~ 175 (199)
..+||+|+..+++-....+..++..+.+. +.++|++.+=+|.........|.+.+.
T Consensus 157 ~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~ 214 (283)
T 2oo3_A 157 PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMR 214 (283)
T ss_dssp TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHH
T ss_pred CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHH
Confidence 34799999987765467899999888764 679999999999877766777777764
No 280
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.36 E-value=1.4e-06 Score=73.41 Aligned_cols=122 Identities=12% Similarity=-0.077 Sum_probs=74.6
Q ss_pred CCCCcEEEeCCCcChHHHHHHh--------h---------CCeEEEeechh-HHHHHHHHHHHhhhccc--cCCCCCCCC
Q 029065 41 LKGKRVIELGAGCGVAGFGMAL--------L---------GCNVITTDQIE-VLPLLKRNVEWNTSRIS--QMNPGSDLL 100 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~--------~---------g~~v~~~D~~~-~l~~a~~~~~~~~~~~~--~~~~~~~~~ 100 (199)
.+..+|+|+|||+|.+++.+.. . ..+|...|++. -....-+.+........ ...+ ...
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~--~~~ 128 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLA--ADG 128 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC-----CC
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhcc--ccC
Confidence 3467999999999998888731 1 13588889743 33333232221100000 0000 000
Q ss_pred CcEEEEEeeeCCCccccccCCCccEEEEeccccCCc--------------------------------------ChHHHH
Q 029065 101 GSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEH--------------------------------------LLEPLL 142 (199)
Q Consensus 101 ~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~--------------------------------------~~~~~l 142 (199)
...-+....-+.+.....+.+.||+|+++-+++|.+ ++..++
T Consensus 129 ~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL 208 (374)
T 3b5i_A 129 NRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFL 208 (374)
T ss_dssp CBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 011233444455444445678999999999999854 344568
Q ss_pred HHHHHhcCCCcEEEEEEEecCh
Q 029065 143 QTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 143 ~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
+...+.|+|||.++++...+..
T Consensus 209 ~~ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 209 RARAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHHHEEEEEEEEEEEEECCC
T ss_pred HHHHHHhCCCCEEEEEEecCCC
Confidence 8889999999999999988754
No 281
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.26 E-value=9.2e-06 Score=68.59 Aligned_cols=112 Identities=15% Similarity=0.081 Sum_probs=72.0
Q ss_pred CCcEEEeCCCcChHHHHHHhh--------------C-----CeEEEeech--h---HHHHH---HHHHHH-hhhccccCC
Q 029065 43 GKRVIELGAGCGVAGFGMALL--------------G-----CNVITTDQI--E---VLPLL---KRNVEW-NTSRISQMN 94 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~--------------g-----~~v~~~D~~--~---~l~~a---~~~~~~-~~~~~~~~~ 94 (199)
..+|+|+||++|..++.+... + .+|+..|++ + +.+.. .+.+.. .+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 578999999999988877753 1 248888974 1 22222 222111 110
Q ss_pred CCCCCCCcEEEEEeeeCCCccccccCCCccEEEEeccccCCcChH-----------------------------------
Q 029065 95 PGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLE----------------------------------- 139 (199)
Q Consensus 95 ~~~~~~~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~~~~----------------------------------- 139 (199)
....-+....-+.+-....+.+.||+|+++-+++|.+..+
T Consensus 127 -----~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~ 201 (384)
T 2efj_A 127 -----KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFT 201 (384)
T ss_dssp -----CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHH
T ss_pred -----CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHH
Confidence 0122444445555544455678999999999998844321
Q ss_pred ----HHHHHHHHhcCCCcEEEEEEEecChh
Q 029065 140 ----PLLQTIFALSGPKTTILLGYEIRSTS 165 (199)
Q Consensus 140 ----~~l~~l~~~l~~~g~i~i~~~~~~~~ 165 (199)
.+++...+.|+|||++++....+...
T Consensus 202 ~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 202 KDFTTFLRIHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEecCCCc
Confidence 23666789999999999999887554
No 282
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.23 E-value=2.3e-05 Score=63.81 Aligned_cols=131 Identities=12% Similarity=0.028 Sum_probs=87.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeec-hhHHHHHHHHHHH-hhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQ-IEVLPLLKRNVEW-NTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~-~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
+.++||=||.|.|.....+.+. ..+|+.+|+ +.+++.+++-+.. +.-.. ...++++...|....- .
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~--------~dpRv~v~~~Dg~~~l--~ 152 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSY--------DDPRFKLVIDDGVNFV--N 152 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG--------GCTTEEEEESCTTTTT--S
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcccccccc--------CCCcEEEEechHHHHH--h
Confidence 4689999999999988888865 356999999 5599999887643 21110 1357888888876443 2
Q ss_pred ccCCCccEEEEec--cccCCc--ChHHHHHHHHHhcCCCcEEEEEEEe--cChhHHHHHHHHHHhCCeEEE
Q 029065 118 AVAPPFDYIIGTD--VVYAEH--LLEPLLQTIFALSGPKTTILLGYEI--RSTSVHEQMLQMWKSNFNVKL 182 (199)
Q Consensus 118 ~~~~~fD~Ii~~~--~~~~~~--~~~~~l~~l~~~l~~~g~i~i~~~~--~~~~~~~~~~~~~~~~~~v~~ 182 (199)
...++||+||... +..... .-..+++.+++.|+|+|++..-... -..+......+.+..-|....
T Consensus 153 ~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3o4f_A 153 QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEE
T ss_pred hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCcee
Confidence 3457899999752 222211 3568999999999999987664332 223334455555655554433
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.21 E-value=7.8e-06 Score=65.46 Aligned_cols=135 Identities=11% Similarity=0.018 Sum_probs=72.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-------C-------CeEEEeec-h---hHHH-----------HHHHHHHHhhhcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-------G-------CNVITTDQ-I---EVLP-----------LLKRNVEWNTSRISQ 92 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-------g-------~~v~~~D~-~---~~l~-----------~a~~~~~~~~~~~~~ 92 (199)
++.+|||+|+|+|...+.++.. + .+|+++|. + +.+. .++..+......+..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3469999999999988776542 2 25999985 3 2333 344443321000000
Q ss_pred CC--CCCCCCCcEEEEEeeeCCCccccccC----CCccEEEEecccc---CCcC-hHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 93 MN--PGSDLLGSIQAVELDWGNEDHIKAVA----PPFDYIIGTDVVY---AEHL-LEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 93 ~~--~~~~~~~~i~~~~~d~~~~~~~~~~~----~~fD~Ii~~~~~~---~~~~-~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.. ...+...++++...|..+. ++... ..||+|+... +- +++. ...+++.+.++|+|||++.. +..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~--l~~~~~~~~~~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t-ysa- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINEL--ISQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLAT-FTS- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHH--GGGSCGGGTTCEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEE-SCC-
T ss_pred hhheeccCCceEEEEEECcHHHH--HhhcccccCCeEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEE-EeC-
Confidence 00 0000112455555555321 11112 3799999853 22 2222 46799999999999998653 221
Q ss_pred ChhHHHHHHHHH-HhCCeEEEecC
Q 029065 163 STSVHEQMLQMW-KSNFNVKLVPK 185 (199)
Q Consensus 163 ~~~~~~~~~~~~-~~~~~v~~~~~ 185 (199)
.. .+...+ ..+|+|+++..
T Consensus 215 a~----~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 215 AG----FVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp BH----HHHHHHHHHTEEEEEECC
T ss_pred CH----HHHHHHHHCCCEEEeCCC
Confidence 22 222222 35899887644
No 284
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.09 E-value=3.1e-05 Score=62.27 Aligned_cols=127 Identities=15% Similarity=0.002 Sum_probs=70.9
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-CCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-GCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+.+|||||||+|-++..++.. ++. |+++|+.. + . .. ..... ....++.....+. +....
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl-~-~~---pi~~~---------~~g~~ii~~~~~~---dv~~l 136 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG-H-EK---PMNVQ---------SLGWNIITFKDKT---DIHRL 136 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT-C-CC---CCCCC---------BTTGGGEEEECSC---CTTTS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC-c-cc---ccccC---------cCCCCeEEEeccc---eehhc
Confidence 3568999999999999988865 554 88888632 1 0 00 00000 0000222222222 11222
Q ss_pred cCCCccEEEEeccccCCcC----h---HHHHHHHHHhcCCC-cEEEEEEEecC-hhHHHHHHHHHHhCCe-EEEecCCC
Q 029065 119 VAPPFDYIIGTDVVYAEHL----L---EPLLQTIFALSGPK-TTILLGYEIRS-TSVHEQMLQMWKSNFN-VKLVPKAK 187 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~----~---~~~l~~l~~~l~~~-g~i~i~~~~~~-~~~~~~~~~~~~~~~~-v~~~~~~~ 187 (199)
..++||+|++.-... ... . -.+++.+.++|+|| |.+++ .-.+. ......+++.+...|. |....+.+
T Consensus 137 ~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~pyg~~~~~l~~~lk~~F~~V~~~KPaS 213 (277)
T 3evf_A 137 EPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLAPYMPDVLEKLELLQRRFGGTVIRNPLS 213 (277)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESCTTSHHHHHHHHHHHHHHCCEEECCTTS
T ss_pred CCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecCCCCccHHHHHHHHHHhcCCEEEEeCCC
Confidence 356899999964433 111 1 13467778999999 98777 33341 3345667777776663 45444433
No 285
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.02 E-value=5.4e-06 Score=69.43 Aligned_cols=112 Identities=11% Similarity=-0.006 Sum_probs=75.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh------------C------CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL------------G------CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGS 102 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~------------g------~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 102 (199)
+..+|+|+||++|..++.+... + .+|+..|++. ....+-+.+.... + .. .
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-------~--~~--~ 119 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-------D--VD--G 119 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-------S--CT--T
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-------c--cC--C
Confidence 3468999999999777665532 2 2488999854 5555544432210 0 00 2
Q ss_pred EEEEEeeeCCCccccccCCCccEEEEeccccCCcC---------------------------------hHHHHHHHHHhc
Q 029065 103 IQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL---------------------------------LEPLLQTIFALS 149 (199)
Q Consensus 103 i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~~---------------------------------~~~~l~~l~~~l 149 (199)
.-+....-+.+-....+.+.+|+|+++-.++|.+. +..+++...+.|
T Consensus 120 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL 199 (359)
T 1m6e_X 120 VCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEV 199 (359)
T ss_dssp CEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHB
T ss_pred CEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 24444555665545566789999999999988332 234588889999
Q ss_pred CCCcEEEEEEEecCh
Q 029065 150 GPKTTILLGYEIRST 164 (199)
Q Consensus 150 ~~~g~i~i~~~~~~~ 164 (199)
+|||++++....+..
T Consensus 200 ~pGG~mvl~~~gr~~ 214 (359)
T 1m6e_X 200 VPGGRMVLTILGRRS 214 (359)
T ss_dssp CTTCEEEEEEEECSS
T ss_pred cCCceEEEEEecCCC
Confidence 999999999988754
No 286
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.92 E-value=1.5e-05 Score=64.97 Aligned_cols=45 Identities=20% Similarity=0.232 Sum_probs=40.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHh
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWN 86 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~ 86 (199)
+|..|||+|||+|..++.++..|.+++++|++ .+++.|++++...
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999995 5999999988654
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.90 E-value=1e-05 Score=65.19 Aligned_cols=127 Identities=11% Similarity=-0.086 Sum_probs=70.2
Q ss_pred CCCcEEEeCCCcChHHHHHHh-hCCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMAL-LGCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~-~g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
.+.+|||||||+|-++..++. .++. |+++|+.. +...+... ... ..++.....+ .+....
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~-------------g~~ii~~~~~---~dv~~l 152 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL-------------GWNLIRFKDK---TDVFNM 152 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT-------------TGGGEEEECS---CCGGGS
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC-------------CCceEEeeCC---cchhhc
Confidence 456999999999999998885 4654 89999732 11111000 000 0112211111 111222
Q ss_pred cCCCccEEEEeccccCCcC-------hHHHHHHHHHhcCCC--cEEEEEEEec-ChhHHHHHHHHHHhCCe-EEEecCCC
Q 029065 119 VAPPFDYIIGTDVVYAEHL-------LEPLLQTIFALSGPK--TTILLGYEIR-STSVHEQMLQMWKSNFN-VKLVPKAK 187 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~~~-------~~~~l~~l~~~l~~~--g~i~i~~~~~-~~~~~~~~~~~~~~~~~-v~~~~~~~ 187 (199)
...++|+|++.-... ... ...++....++|+|| |.+++-. .+ .......+++.+...|. |....+.+
T Consensus 153 ~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv-F~pyg~~~~~l~~~lk~~F~~V~~~KPaS 230 (282)
T 3gcz_A 153 EVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV-LCPYTPLIMEELSRLQLKHGGGLVRVPLS 230 (282)
T ss_dssp CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-SCCCSHHHHHHHHHHHHHHCCEEECCTTS
T ss_pred CCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE-ecCCCccHHHHHHHHHHhcCCEEEEcCCC
Confidence 357899999974443 211 113567777889999 9866633 33 13335667777776653 44444433
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.89 E-value=3.1e-05 Score=64.89 Aligned_cols=85 Identities=13% Similarity=0.024 Sum_probs=57.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
+|.+||||||.+|-++..++.+|++|+++|...+-+.. .. ..++++...|..... ...+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l----~~--------------~~~V~~~~~d~~~~~---~~~~ 269 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSL----MD--------------TGQVTWLREDGFKFR---PTRS 269 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHH----HT--------------TTCEEEECSCTTTCC---CCSS
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhh----cc--------------CCCeEEEeCcccccc---CCCC
Confidence 58899999999999999999999999999975432211 11 236777766643322 2346
Q ss_pred CccEEEEeccccCCcChHHHHHHHHHhcCC
Q 029065 122 PFDYIIGTDVVYAEHLLEPLLQTIFALSGP 151 (199)
Q Consensus 122 ~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~ 151 (199)
+||+|++.-.. .+..+...+.+++..
T Consensus 270 ~~D~vvsDm~~----~p~~~~~l~~~wl~~ 295 (375)
T 4auk_A 270 NISWMVCDMVE----KPAKVAALMAQWLVN 295 (375)
T ss_dssp CEEEEEECCSS----CHHHHHHHHHHHHHT
T ss_pred CcCEEEEcCCC----ChHHhHHHHHHHHhc
Confidence 89999985443 344455555555443
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.85 E-value=0.00044 Score=60.79 Aligned_cols=128 Identities=13% Similarity=-0.007 Sum_probs=78.8
Q ss_pred CCCcEEEeCCCcChHHHHHHhh---------------CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEE
Q 029065 42 KGKRVIELGAGCGVAGFGMALL---------------GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQA 105 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~---------------g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~ 105 (199)
.+.+|+|-.||+|.+-+.+... ...+.|.|+. .+...|+-|+..++.. ...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~------------~~~I 284 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE------------YPRI 284 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS------------CCEE
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc------------cccc
Confidence 4669999999999765555431 2359999994 5889999999888642 2233
Q ss_pred EEeeeCCCcc-ccccCCCccEEEEeccccCCc----------------ChHHHHHHHHHhcC-------CCcEEEEEEEe
Q 029065 106 VELDWGNEDH-IKAVAPPFDYIIGTDVVYAEH----------------LLEPLLQTIFALSG-------PKTTILLGYEI 161 (199)
Q Consensus 106 ~~~d~~~~~~-~~~~~~~fD~Ii~~~~~~~~~----------------~~~~~l~~l~~~l~-------~~g~i~i~~~~ 161 (199)
...|-..... ......+||+|++|+|+-... .-..+++.+.+.|+ +||++.+..+.
T Consensus 285 ~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 285 DPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp ECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred cccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 3333221111 111235799999999983211 12235666777776 69998888775
Q ss_pred c---ChhHHHHHHHHHHhCCeEE
Q 029065 162 R---STSVHEQMLQMWKSNFNVK 181 (199)
Q Consensus 162 ~---~~~~~~~~~~~~~~~~~v~ 181 (199)
. .......+.+.+.+.+.+.
T Consensus 365 g~Lf~~~~~~~iRk~Lle~~~l~ 387 (530)
T 3ufb_A 365 GTLFSDGISARIKEELLKNFNLH 387 (530)
T ss_dssp HHHHCCTHHHHHHHHHHHHSEEE
T ss_pred hhhhccchHHHHHHHHhhcCEEE
Confidence 2 1222345666665555554
No 290
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.84 E-value=0.00011 Score=61.43 Aligned_cols=126 Identities=14% Similarity=0.151 Sum_probs=83.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCC--eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGC--NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~--~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
+|.+|||+.||+|-=+..++..+. .|+++|++. -++.+++|+...+... -....++.+...|..... ..
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~------~~~~~~v~v~~~D~~~~~--~~ 219 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEE------IRDGNQVRVTSWDGRKWG--EL 219 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTT------TTTSSSEEEECCCGGGHH--HH
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhh------hccCCceEEEeCchhhcc--hh
Confidence 578999999999988888887765 499999954 7888888888765310 001235666665543221 12
Q ss_pred cCCCccEEEEeccccC--------Cc----------------ChHHHHHHHHHhcCCCcEEEEEEEe----cChhHHHHH
Q 029065 119 VAPPFDYIIGTDVVYA--------EH----------------LLEPLLQTIFALSGPKTTILLGYEI----RSTSVHEQM 170 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~--------~~----------------~~~~~l~~l~~~l~~~g~i~i~~~~----~~~~~~~~~ 170 (199)
..+.||.|++..+.-. .. .-..++....++|+|||.++-++.. .+..+.+.|
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~ 299 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGA 299 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHH
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHH
Confidence 2468999998755321 00 1245677777889999998777654 234456777
Q ss_pred HHHHH
Q 029065 171 LQMWK 175 (199)
Q Consensus 171 ~~~~~ 175 (199)
++...
T Consensus 300 L~~~~ 304 (359)
T 4fzv_A 300 IELLA 304 (359)
T ss_dssp HHHHH
T ss_pred HHhCC
Confidence 76654
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.75 E-value=5.5e-05 Score=61.34 Aligned_cols=128 Identities=12% Similarity=-0.050 Sum_probs=71.4
Q ss_pred CCCCcEEEeCCCcChHHHHHHhh-CCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELGAGCGVAGFGMALL-GCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la~~-g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.++++||||||++|-++..++.. ++. |+++|+.. ....... ... ....+.....+ .+...
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~-------------~~~~iv~~~~~---~di~~ 142 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT-------------LGWNIVKFKDK---SNVFT 142 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB-------------TTGGGEEEECS---CCTTT
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc-------------cCCceEEeecC---ceeee
Confidence 36789999999999999999964 554 88999732 1000000 000 00011111111 11111
Q ss_pred ccCCCccEEEEeccccCCcC-------hHHHHHHHHHhcCCC-cEEEEEEEec-ChhHHHHHHHHHHhCCe-EEEecCCC
Q 029065 118 AVAPPFDYIIGTDVVYAEHL-------LEPLLQTIFALSGPK-TTILLGYEIR-STSVHEQMLQMWKSNFN-VKLVPKAK 187 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~-------~~~~l~~l~~~l~~~-g~i~i~~~~~-~~~~~~~~~~~~~~~~~-v~~~~~~~ 187 (199)
...+++|+|++.-... ... ...++....++|+|| |.+++- -.+ .......+++.+...|. |....+.+
T Consensus 143 l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K-vF~~yG~~~~~ll~~lk~~F~~V~~~KPaS 220 (300)
T 3eld_A 143 MPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK-VLAPYHPDVIEKLERLQLRFGGGIVRVPFS 220 (300)
T ss_dssp SCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE-ESSTTSHHHHHHHHHHHHHHCCEEECCTTS
T ss_pred cCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE-eccccCccHHHHHHHHHHhCCcEEEEeCCC
Confidence 2246899999964433 222 134577778899999 986664 333 13335666777766653 44444433
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.73 E-value=8.9e-05 Score=60.05 Aligned_cols=105 Identities=11% Similarity=0.028 Sum_probs=73.1
Q ss_pred CCcEEEeCCCcChHHHHHHhh-------CCeEEEeech---------------------------hHHHHHHHHHHHhhh
Q 029065 43 GKRVIELGAGCGVAGFGMALL-------GCNVITTDQI---------------------------EVLPLLKRNVEWNTS 88 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~-------g~~v~~~D~~---------------------------~~l~~a~~~~~~~~~ 88 (199)
.++|||+|+..|.-++.++.. +.+|+++|.. ..++.+++|+...+.
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 459999999999888777642 4569999941 135667888887753
Q ss_pred ccccCCCCCCCCCcEEEEEeeeCCCcccc-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEe
Q 029065 89 RISQMNPGSDLLGSIQAVELDWGNEDHIK-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEI 161 (199)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~ 161 (199)
. .+++++...+..+. ++ ...++||+|....-.| ......++.+..+|+|||.+++-+..
T Consensus 187 ~----------~~~I~li~Gda~et--L~~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 187 L----------DEQVRFLPGWFKDT--LPTAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp C----------STTEEEEESCHHHH--STTCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred C----------cCceEEEEeCHHHH--HhhCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 1 25799998777422 22 2246899998864222 23456788899999999987776653
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.66 E-value=0.00024 Score=56.48 Aligned_cols=121 Identities=12% Similarity=-0.061 Sum_probs=63.3
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEe-eeCCCccccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVEL-DWGNEDHIKA 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~ 118 (199)
++.+|+||||++|-++..++.. ...|.+.++.--+ +.....|.+....-+.+... |+.+.
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~------------~~~P~~~~~~Gv~~i~~~~G~Df~~~----- 135 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG------------HEEPMLMQSYGWNIVTMKSGVDVFYK----- 135 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT------------SCCCCCCCSTTGGGEEEECSCCGGGS-----
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc------------ccCCCcccCCCceEEEeeccCCccCC-----
Confidence 4789999999999999999986 2233444321100 00000000000112344444 66432
Q ss_pred cCCCccEEEEeccccCC---cChH---HHHHHHHHhcCCCc-EEEEEEEecChhHHHHHHHHHHhCCe
Q 029065 119 VAPPFDYIIGTDVVYAE---HLLE---PLLQTIFALSGPKT-TILLGYEIRSTSVHEQMLQMWKSNFN 179 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~~~~---~~~~---~~l~~l~~~l~~~g-~i~i~~~~~~~~~~~~~~~~~~~~~~ 179 (199)
...++|+|+|.-.-... .+.. .++....++|+||| .+++-.-......+..+++.+...|.
T Consensus 136 ~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~ 203 (269)
T 2px2_A 136 PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFG 203 (269)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcC
Confidence 13589999986332211 1111 15666778899999 66553222111334455666666553
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.60 E-value=5.4e-05 Score=55.31 Aligned_cols=32 Identities=28% Similarity=0.288 Sum_probs=28.5
Q ss_pred CCcEEEeCCCcC-hHHHHHHh-hCCeEEEeechh
Q 029065 43 GKRVIELGAGCG-VAGFGMAL-LGCNVITTDQIE 74 (199)
Q Consensus 43 ~~~VLdlGcG~G-~~sl~la~-~g~~v~~~D~~~ 74 (199)
+.+|||+|||.| ..+..++. .|..|+++|+++
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp 69 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKP 69 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSC
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCc
Confidence 569999999999 59999997 899999999844
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.58 E-value=0.00011 Score=61.72 Aligned_cols=132 Identities=16% Similarity=0.051 Sum_probs=79.7
Q ss_pred CCCcEEEeCCCcChHHHHHHhhC-CeEEEeec-hhHHHHHHHHHHH-hhhccccCCCCCCCCCcEEEEEeeeCCCcc-cc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLG-CNVITTDQ-IEVLPLLKRNVEW-NTSRISQMNPGSDLLGSIQAVELDWGNEDH-IK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g-~~v~~~D~-~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~ 117 (199)
+.++||=||.|.|.....+.+.. .+|+.+|+ +.+++.+++-+.. ++.. ...| ..+++++...|....-. ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~--~d~p---r~~rv~vii~Da~~fl~~~~ 279 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDV--LDNL---KGDCYQVLIEDCIPVLKRYA 279 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----C--CSSS---EETTEEEEESCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhh--hccc---cccceeeehHHHHHHHHhhh
Confidence 35899999999998888777654 45999999 5599999886422 1100 0001 12356766655432211 01
Q ss_pred ccCCCccEEEEeccc--cC--------CcChHHHHHHHHHhcCCCcEEEEEEE-ecChhHHHHHHHHHHhCC
Q 029065 118 AVAPPFDYIIGTDVV--YA--------EHLLEPLLQTIFALSGPKTTILLGYE-IRSTSVHEQMLQMWKSNF 178 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~--~~--------~~~~~~~l~~l~~~l~~~g~i~i~~~-~~~~~~~~~~~~~~~~~~ 178 (199)
...++||+||..-+- .. .-...++++.+++.|+|+|++..-.. ....+....+.+.+.+-|
T Consensus 280 ~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF 351 (381)
T 3c6k_A 280 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLY 351 (381)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSS
T ss_pred hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhC
Confidence 224689999986211 01 01246788999999999998765322 222333455666666654
No 296
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.52 E-value=0.00012 Score=58.28 Aligned_cols=46 Identities=20% Similarity=0.125 Sum_probs=40.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhh
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNT 87 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~ 87 (199)
+|..|||.+||+|..++.+++.|.+++++|++ .+++.+++++..++
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 57899999999999999999999999999995 49999999987664
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.35 E-value=0.00022 Score=57.55 Aligned_cols=72 Identities=19% Similarity=0.169 Sum_probs=52.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc-cc-
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI-KA- 118 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~- 118 (199)
++..++|.+||.|-.+..++..+.+|+++|. +.+++.+++ +.. .++.+.+.++.+.... ..
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~---------------~rv~lv~~~f~~l~~~L~~~ 85 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL---------------PGLTVVQGNFRHLKRHLAAL 85 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC---------------TTEEEEESCGGGHHHHHHHT
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc---------------CCEEEEECCcchHHHHHHHc
Confidence 4679999999999999999988889999999 459988877 422 2677777776544321 11
Q ss_pred cCCCccEEEEe
Q 029065 119 VAPPFDYIIGT 129 (199)
Q Consensus 119 ~~~~fD~Ii~~ 129 (199)
..+++|.|++.
T Consensus 86 g~~~vDgIL~D 96 (285)
T 1wg8_A 86 GVERVDGILAD 96 (285)
T ss_dssp TCSCEEEEEEE
T ss_pred CCCCcCEEEeC
Confidence 11468887764
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.23 E-value=0.00019 Score=56.49 Aligned_cols=113 Identities=12% Similarity=-0.035 Sum_probs=62.6
Q ss_pred CCCcEEEeCCCcChHHHHHHh-hCCe-EEEeechh--H-HHHHHHHHHHhhhccccCCCCCCCCCcEEEEEe-eeCCCcc
Q 029065 42 KGKRVIELGAGCGVAGFGMAL-LGCN-VITTDQIE--V-LPLLKRNVEWNTSRISQMNPGSDLLGSIQAVEL-DWGNEDH 115 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~-~g~~-v~~~D~~~--~-l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~ 115 (199)
.+.+||||||++|-++..++. .|++ |+++|+-. - .+...+.. + -..+++... |+...
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~---g------------wn~v~fk~gvDv~~~-- 140 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTY---G------------WNIVKLMSGKDVFYL-- 140 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCT---T------------TTSEEEECSCCGGGC--
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhc---C------------cCceEEEeccceeec--
Confidence 456999999999999997775 4666 99999622 1 00000000 1 124666665 54211
Q ss_pred ccccCCCccEEEEeccccCCcC----h---HHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHh
Q 029065 116 IKAVAPPFDYIIGTDVVYAEHL----L---EPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKS 176 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~~~~~~----~---~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~ 176 (199)
...++|.|+|.--- .... . -.+++.+.++|++ +.+++-.-.-......++++.+..
T Consensus 141 ---~~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~ 203 (267)
T 3p8z_A 141 ---PPEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQR 203 (267)
T ss_dssp ---CCCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHH
T ss_pred ---CCccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHH
Confidence 23679999986222 2221 1 1255556677888 666663332222223345555554
No 299
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.20 E-value=0.00026 Score=58.79 Aligned_cols=73 Identities=19% Similarity=0.095 Sum_probs=49.4
Q ss_pred CCcEEEeCCCcChHHHHHHhhC--Ce-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc
Q 029065 43 GKRVIELGAGCGVAGFGMALLG--CN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA 118 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g--~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 118 (199)
..+|+||.||+|.+++.+...| .+ |.++|++. +++..+.|... ..+...|+........
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----------------~~~~~~Di~~~~~~~~ 64 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----------------TQLLAKTIEGITLEEF 64 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------------SCEECSCGGGCCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----------------cccccCCHHHccHhHc
Confidence 3589999999999999999998 45 99999954 77777776421 1234455543321111
Q ss_pred cCCCccEEEEeccc
Q 029065 119 VAPPFDYIIGTDVV 132 (199)
Q Consensus 119 ~~~~fD~Ii~~~~~ 132 (199)
....+|+|+++++.
T Consensus 65 ~~~~~D~l~~gpPC 78 (343)
T 1g55_A 65 DRLSFDMILMSPPC 78 (343)
T ss_dssp HHHCCSEEEECCC-
T ss_pred CcCCcCEEEEcCCC
Confidence 11269999999874
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.20 E-value=0.00072 Score=56.90 Aligned_cols=72 Identities=22% Similarity=0.176 Sum_probs=50.9
Q ss_pred CcEEEeCCCcChHHHHHHhhCCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc---
Q 029065 44 KRVIELGAGCGVAGFGMALLGCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA--- 118 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~--- 118 (199)
.+|+||.||+|-+++.+...|.+ |.++|+.+ +++..+.|.. ...+...|+........
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~-----------------~~~~~~~DI~~~~~~~~~~~ 65 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP-----------------RSLHVQEDVSLLNAEIIKGF 65 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT-----------------TSEEECCCGGGCCHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC-----------------CCceEecChhhcCHHHHHhh
Confidence 47999999999999999999998 77999954 7666666532 22445556654432111
Q ss_pred --cCCCccEEEEeccc
Q 029065 119 --VAPPFDYIIGTDVV 132 (199)
Q Consensus 119 --~~~~fD~Ii~~~~~ 132 (199)
..+.+|+|++.++.
T Consensus 66 ~~~~~~~D~i~ggpPC 81 (376)
T 3g7u_A 66 FKNDMPIDGIIGGPPC 81 (376)
T ss_dssp HCSCCCCCEEEECCCC
T ss_pred cccCCCeeEEEecCCC
Confidence 23579999998775
No 301
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.19 E-value=0.001 Score=54.93 Aligned_cols=75 Identities=20% Similarity=0.170 Sum_probs=52.5
Q ss_pred CCCCCCCCcEEEeCCCcChHHHHHHhhCCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 37 CPSKLKGKRVIELGAGCGVAGFGMALLGCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
++....+.+|+||+||+|-+++.+...|.+ |.++|++. +++..+.|.... . ..|+....
T Consensus 5 ~~~~~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~----------------~---~~Di~~~~ 65 (327)
T 2c7p_A 5 KDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK----------------P---EGDITQVN 65 (327)
T ss_dssp SSCTTTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC----------------C---BSCGGGSC
T ss_pred cccccCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC----------------C---cCCHHHcC
Confidence 344556789999999999999999999998 88899854 777776664211 1 34444332
Q ss_pred cccccCCCccEEEEeccc
Q 029065 115 HIKAVAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~~~~~~fD~Ii~~~~~ 132 (199)
.. ....+|+|+++++.
T Consensus 66 ~~--~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 66 EK--TIPDHDILCAGFPC 81 (327)
T ss_dssp GG--GSCCCSEEEEECCC
T ss_pred Hh--hCCCCCEEEECCCC
Confidence 11 12469999999776
No 302
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.00 E-value=0.00079 Score=54.59 Aligned_cols=31 Identities=29% Similarity=0.266 Sum_probs=26.3
Q ss_pred CCCcEEEeCCCcChHHHHHHh-hCCe-EEEeec
Q 029065 42 KGKRVIELGAGCGVAGFGMAL-LGCN-VITTDQ 72 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~-~g~~-v~~~D~ 72 (199)
.+.+||||||++|-++..++. .|++ |+++|+
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdv 126 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTK 126 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECC
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEc
Confidence 456999999999999997775 4776 999996
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.96 E-value=0.0083 Score=48.70 Aligned_cols=111 Identities=19% Similarity=0.110 Sum_probs=65.3
Q ss_pred CCCcEEEeCCCc--C--hHHHHHHhh---CCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 42 KGKRVIELGAGC--G--VAGFGMALL---GCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 42 ~~~~VLdlGcG~--G--~~sl~la~~---g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.|.+|||||||+ | .=|..+.+. |+.|+++|+.++.. ... .+.+.|...
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s----------------------da~-~~IqGD~~~-- 163 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS----------------------DAD-STLIGDCAT-- 163 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC----------------------SSS-EEEESCGGG--
T ss_pred CCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc----------------------CCC-eEEEccccc--
Confidence 578999999843 2 223344433 45799999755210 011 335666432
Q ss_pred cccccCCCccEEEEecccc---C--------CcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeEEE
Q 029065 115 HIKAVAPPFDYIIGTDVVY---A--------EHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNVKL 182 (199)
Q Consensus 115 ~~~~~~~~fD~Ii~~~~~~---~--------~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v~~ 182 (199)
....++||+|++.-..- + ....+.++..+.+.|+|||.+++-.-.... ..++.++.+.|....
T Consensus 164 --~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg---~~~L~~lrk~F~~VK 237 (344)
T 3r24_A 164 --VHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW---NADLYKLMGHFSWWT 237 (344)
T ss_dssp --EEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC---CHHHHHHHTTEEEEE
T ss_pred --cccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC---HHHHHHHHhhCCeEE
Confidence 12257899999862211 1 113666788889999999998776543333 234555556776533
No 304
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.60 E-value=0.00087 Score=68.45 Aligned_cols=100 Identities=18% Similarity=0.074 Sum_probs=45.2
Q ss_pred CCcEEEeCCCcChHHHHH-HhhC------CeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 43 GKRVIELGAGCGVAGFGM-ALLG------CNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~l-a~~g------~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+|||||+|+|..+..+ ...+ ..++.+|++. ..+.+++.+... .+.....|..+.
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---------------di~~~~~d~~~~- 1304 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---------------HVTQGQWDPANP- 1304 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------------TEEEECCCSSCC-
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------------cccccccccccc-
Confidence 458999999998543222 2222 2599999854 666666654332 122211222111
Q ss_pred cccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 115 HIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 115 ~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.......||+||++.+++...+....+..++++|+|+|.+++..
T Consensus 1305 -~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1305 -APGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp -CC-----CCEEEEECC--------------------CCEEEEEE
T ss_pred -ccCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 01123569999999999888888999999999999999887754
No 305
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.29 E-value=0.0053 Score=50.71 Aligned_cols=72 Identities=15% Similarity=0.087 Sum_probs=48.1
Q ss_pred CcEEEeCCCcChHHHHHHhhCC--e-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc
Q 029065 44 KRVIELGAGCGVAGFGMALLGC--N-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV 119 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~g~--~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 119 (199)
.+++||.||.|-+++.+...|. + |.++|+++ +++.-+.|.. .......|+.........
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----------------~~~~~~~DI~~~~~~~~~ 66 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----------------ETNLLNRNIQQLTPQVIK 66 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----------------TSCEECCCGGGCCHHHHH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----------------CCceeccccccCCHHHhc
Confidence 3799999999999999998885 5 78899855 6665555532 112344555544322222
Q ss_pred CCCccEEEEeccc
Q 029065 120 APPFDYIIGTDVV 132 (199)
Q Consensus 120 ~~~fD~Ii~~~~~ 132 (199)
...+|+++++++.
T Consensus 67 ~~~~D~l~ggpPC 79 (333)
T 4h0n_A 67 KWNVDTILMSPPC 79 (333)
T ss_dssp HTTCCEEEECCCC
T ss_pred cCCCCEEEecCCC
Confidence 2369999988775
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.17 E-value=0.0065 Score=50.64 Aligned_cols=55 Identities=13% Similarity=0.058 Sum_probs=41.6
Q ss_pred CCCcEEEeCCCcChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 42 KGKRVIELGAGCGVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
++..|||||.|.|.++..++.. +.+|+++++.. .++..+... . ..++++.+.|..
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--------------~~~l~ii~~D~l 115 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--------------GSPLQILKRDPY 115 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--------------TSSCEEECSCTT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--------------CCCEEEEECCcc
Confidence 3578999999999999999976 55799999844 777666654 1 236777777764
No 307
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.91 E-value=0.0088 Score=48.56 Aligned_cols=74 Identities=22% Similarity=0.177 Sum_probs=49.2
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeE---EEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNV---ITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v---~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
...+|+||.||.|-+++.+...|.++ .++|+++ +++..+.|.. .......|+.+.....
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~-----------------~~~~~~~DI~~i~~~~ 77 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ-----------------GKIMYVGDVRSVTQKH 77 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT-----------------TCEEEECCGGGCCHHH
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC-----------------CCceeCCChHHccHHH
Confidence 34699999999999999999998764 7889854 6555554421 1234455665443211
Q ss_pred cc-CCCccEEEEeccc
Q 029065 118 AV-APPFDYIIGTDVV 132 (199)
Q Consensus 118 ~~-~~~fD~Ii~~~~~ 132 (199)
.. .+.+|+|+++++.
T Consensus 78 i~~~~~~Dll~ggpPC 93 (295)
T 2qrv_A 78 IQEWGPFDLVIGGSPC 93 (295)
T ss_dssp HHHTCCCSEEEECCCC
T ss_pred hcccCCcCEEEecCCC
Confidence 11 2479999998765
No 308
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.90 E-value=0.018 Score=46.95 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=48.2
Q ss_pred CcEEEeCCCcChHHHHHHhhCCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 44 KRVIELGAGCGVAGFGMALLGCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
.+||||.||.|-+++.+...|.+ |.++|+.+ +++.-+.|.. -.....|+.+.... .-+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~------------------~~~~~~DI~~i~~~--~~~ 60 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS------------------AKLIKGDISKISSD--EFP 60 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC------------------SEEEESCGGGCCGG--GSC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC------------------CCcccCChhhCCHh--hCC
Confidence 36999999999999999999998 77889854 6666555521 13445566543321 235
Q ss_pred CccEEEEeccc
Q 029065 122 PFDYIIGTDVV 132 (199)
Q Consensus 122 ~fD~Ii~~~~~ 132 (199)
..|++++.+|.
T Consensus 61 ~~D~l~ggpPC 71 (331)
T 3ubt_Y 61 KCDGIIGGPPS 71 (331)
T ss_dssp CCSEEECCCCG
T ss_pred cccEEEecCCC
Confidence 79999988765
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.71 E-value=0.014 Score=48.07 Aligned_cols=120 Identities=10% Similarity=0.025 Sum_probs=69.1
Q ss_pred CCcEEEeCCCcChHHHHHHhhCC--e-E-EEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 43 GKRVIELGAGCGVAGFGMALLGC--N-V-ITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g~--~-v-~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
..+++||.||.|-+++.+...|. + | .++|+++ +++..+.|.... ....|+.+.....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------------------~~~~DI~~~~~~~ 71 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------------------VQVKNLDSISIKQ 71 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------------------CBCCCTTTCCHHH
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------------------cccCChhhcCHHH
Confidence 35899999999999999999883 5 6 6999955 766666664211 2234444333211
Q ss_pred ccCCCccEEEEeccccCC-----------cCh-HHHHHHHHH-hcCC---CcEEEEEEEecC---hhHHHHHHHHHH-hC
Q 029065 118 AVAPPFDYIIGTDVVYAE-----------HLL-EPLLQTIFA-LSGP---KTTILLGYEIRS---TSVHEQMLQMWK-SN 177 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~-----------~~~-~~~l~~l~~-~l~~---~g~i~i~~~~~~---~~~~~~~~~~~~-~~ 177 (199)
.....+|+++++++.-.. .+. ..++..+.+ +++. ...+++...+.. ...+..+.+.+. .+
T Consensus 72 i~~~~~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~G 151 (327)
T 3qv2_A 72 IESLNCNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQ 151 (327)
T ss_dssp HHHTCCCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTT
T ss_pred hccCCCCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCC
Confidence 122379999998774222 122 245555555 5431 133444444432 234556666664 36
Q ss_pred CeE
Q 029065 178 FNV 180 (199)
Q Consensus 178 ~~v 180 (199)
|.+
T Consensus 152 Y~v 154 (327)
T 3qv2_A 152 YYI 154 (327)
T ss_dssp CEE
T ss_pred CEE
Confidence 766
No 310
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.62 E-value=0.037 Score=46.86 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=38.3
Q ss_pred CCCCcEEEeCCCcChHHHHHH-hhC---CeEEEeec-hhHHHHHHHHHHH
Q 029065 41 LKGKRVIELGAGCGVAGFGMA-LLG---CNVITTDQ-IEVLPLLKRNVEW 85 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~~sl~la-~~g---~~v~~~D~-~~~l~~a~~~~~~ 85 (199)
-++..|+|+||+.|..++.++ +.+ ++|+++|. +...+.+++|+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 367899999999999999887 443 57999998 5689999999987
No 311
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.45 E-value=0.014 Score=47.76 Aligned_cols=44 Identities=9% Similarity=-0.015 Sum_probs=38.1
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechh-HHHHHHHHHHH
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIE-VLPLLKRNVEW 85 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~ 85 (199)
+|..|||-.||+|..++.+.+.|-+.+++|+++ +++.+++++..
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSC
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHh
Confidence 577999999999999999999999999999955 88888777643
No 312
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.13 E-value=0.026 Score=46.22 Aligned_cols=45 Identities=27% Similarity=0.211 Sum_probs=37.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeec-h---hHHHHHHHHHHHh
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQ-I---EVLPLLKRNVEWN 86 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~-~---~~l~~a~~~~~~~ 86 (199)
+|..|||-.||+|..++++...|-+.+++|+ + ..++.+++++...
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 5779999999999999999999999999998 5 6778887776544
No 313
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.93 E-value=0.2 Score=41.17 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=73.6
Q ss_pred CCcEEEeCCCcChHHHHHHhh--CCeEEEeechhHHHHHHHHHHHhhhcc-----ccCCCCCC----CCCcEEEEEeeeC
Q 029065 43 GKRVIELGAGCGVAGFGMALL--GCNVITTDQIEVLPLLKRNVEWNTSRI-----SQMNPGSD----LLGSIQAVELDWG 111 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~--g~~v~~~D~~~~l~~a~~~~~~~~~~~-----~~~~~~~~----~~~~i~~~~~d~~ 111 (199)
.+.|+.||||......-+... +.+++=+|.+++++.-++.+...+... ....+..+ ...+...+..|+.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 469999999999877777764 445777788887777666665542100 00000000 1246788888887
Q ss_pred CCccc----c--ccCCCccEEEEeccccC--CcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 112 NEDHI----K--AVAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 112 ~~~~~----~--~~~~~fD~Ii~~~~~~~--~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
+.... . .......++++-.+++. .+....+++.+.... |+|.+++.+...
T Consensus 178 d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 178 DITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp CHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred CcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 64321 1 12245677777777655 557888899998877 677765555443
No 314
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=94.80 E-value=0.23 Score=38.98 Aligned_cols=110 Identities=16% Similarity=0.139 Sum_probs=66.7
Q ss_pred CCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 37 CPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
.+..++++++|=-|++.|+ ++..++..|++|++++. + +.++.+...+... ..++.+..+|..
T Consensus 12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~ 78 (270)
T 3is3_A 12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-------------GSDAIAIKADIR 78 (270)
T ss_dssp CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTT
T ss_pred CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCC
Confidence 4566889999999988764 55566677999998875 3 3444444444333 236778888887
Q ss_pred CCcccc-------ccCCCccEEEEeccccCCc--------C-----------hHHHHHHHHHhcCCCcEEEEEE
Q 029065 112 NEDHIK-------AVAPPFDYIIGTDVVYAEH--------L-----------LEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 112 ~~~~~~-------~~~~~fD~Ii~~~~~~~~~--------~-----------~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
+.+... ..-++.|++|.+.-+.... . .-.+.+.+...++++|.+++..
T Consensus 79 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 79 QVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 654221 1124789998775543211 1 2233445556666777765543
No 315
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.71 E-value=0.057 Score=44.51 Aligned_cols=97 Identities=13% Similarity=-0.037 Sum_probs=58.3
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHhh-CCe-EEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEE-----eeeC
Q 029065 41 LKGKRVIELGAGC-GVAGFGMALL-GCN-VITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVE-----LDWG 111 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~~-g~~-v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~d~~ 111 (199)
-+|.+||=+|+|. |..++.+|+. |++ |+++|.+ +-++.+++. ... .+.... .++.
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~---------------~~~~~~~~~~~~~~~ 241 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE---------------VVTHKVERLSAEESA 241 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT---------------CEEEECCSCCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh---------------cccccccccchHHHH
Confidence 3578999999975 7788888864 887 9999974 466666543 111 122110 0110
Q ss_pred CCccccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 112 NEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 112 ~~~~~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
..-........+|+|+-.- .-...+....+.|+++|.+++..
T Consensus 242 ~~v~~~t~g~g~Dvvid~~------g~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 242 KKIVESFGGIEPAVALECT------GVESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HHHHHHTSSCCCSEEEECS------CCHHHHHHHHHHSCTTCEEEECC
T ss_pred HHHHHHhCCCCCCEEEECC------CChHHHHHHHHHhcCCCEEEEEc
Confidence 0000001134799988642 23356788888999999877653
No 316
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=94.53 E-value=0.17 Score=39.89 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=55.3
Q ss_pred CCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 37 CPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
||..++||.+|==|++.|+ ++..++..|++|+.+|.+.. +.+.+.+...+ .+......|..+.
T Consensus 3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~-~~~~~~~~~~g-------------~~~~~~~~Dv~d~ 68 (247)
T 4hp8_A 3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP-DETLDIIAKDG-------------GNASALLIDFADP 68 (247)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTT-------------CCEEEEECCTTST
T ss_pred CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH-HHHHHHHHHhC-------------CcEEEEEccCCCH
Confidence 4667899999999998874 66777788999999997432 22222333332 3567777888665
Q ss_pred cccc--ccCCCccEEEEecccc
Q 029065 114 DHIK--AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 114 ~~~~--~~~~~fD~Ii~~~~~~ 133 (199)
.... ...++.|+++-|.-+.
T Consensus 69 ~~v~~~~~~g~iDiLVNNAGi~ 90 (247)
T 4hp8_A 69 LAAKDSFTDAGFDILVNNAGII 90 (247)
T ss_dssp TTTTTSSTTTCCCEEEECCCCC
T ss_pred HHHHHHHHhCCCCEEEECCCCC
Confidence 4322 1236799999876553
No 317
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.35 E-value=0.017 Score=47.96 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=57.2
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc--
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-- 114 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-- 114 (199)
-+|.+||-+|||. |...+.+|+ .|+ +|+++|.+ +-++.+++ .+.. .+ +|....+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--------------~v--i~~~~~~~~ 248 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGAT--------------HV--INSKTQDPV 248 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCS--------------EE--EETTTSCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCC--------------EE--ecCCccCHH
Confidence 3578999999986 877777776 488 59999974 45555543 2211 11 2222111
Q ss_pred -cc-cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 115 -HI-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 115 -~~-~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.. ....+.+|+|+-.- .....+....+.|+++|.+++..
T Consensus 249 ~~~~~~~~gg~D~vid~~------g~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 249 AAIKEITDGGVNFALEST------GSPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp HHHHHHTTSCEEEEEECS------CCHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHhcCCCCcEEEECC------CCHHHHHHHHHHHhcCCEEEEeC
Confidence 00 11123799987542 12456788888999999876643
No 318
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.32 E-value=0.48 Score=37.29 Aligned_cols=83 Identities=20% Similarity=0.253 Sum_probs=53.1
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
...++++++|=-|++.|+ ++..++..|++|+++|. + +.++.+...+... ..++.+..+|..+
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d 92 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-------------GGRAVAIRADNRD 92 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTC
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEECCCCC
Confidence 345789999999998764 55666677999999875 3 3444444444333 2357778888876
Q ss_pred Ccccc-------ccCCCccEEEEecccc
Q 029065 113 EDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 113 ~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.+... ..-++.|++|.+.-+.
T Consensus 93 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (271)
T 3v2g_A 93 AEAIEQAIRETVEALGGLDILVNSAGIW 120 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 54221 1124789998876543
No 319
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.13 E-value=0.56 Score=38.14 Aligned_cols=59 Identities=17% Similarity=0.077 Sum_probs=36.9
Q ss_pred CCccEEEEeccccCC---cCh-HHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHHhCCeEEEecC
Q 029065 121 PPFDYIIGTDVVYAE---HLL-EPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWKSNFNVKLVPK 185 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~---~~~-~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 185 (199)
..||+|+..+ +-.. +++ ..+++.+.++++|||++. ++.. ... ..+ .....||+|+++..
T Consensus 185 ~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~la-TYta-ag~-VRR--~L~~aGF~V~k~~G 247 (308)
T 3vyw_A 185 FKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWV-SYSS-SLS-VRK--SLLTLGFKVGSSRE 247 (308)
T ss_dssp CCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEE-ESCC-CHH-HHH--HHHHTTCEEEEEEC
T ss_pred cceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEE-EEeC-cHH-HHH--HHHHCCCEEEecCC
Confidence 4799998854 3222 222 578999999999999743 3332 222 121 22346899988765
No 320
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.08 E-value=0.031 Score=46.06 Aligned_cols=93 Identities=20% Similarity=0.200 Sum_probs=56.7
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC---C
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN---E 113 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~---~ 113 (199)
-+|.+||-+|+|. |...+.+|+ .|+ +|+++|.++ -++.+++ .+. + .+ +|... .
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa------------~--~v--i~~~~~~~~ 229 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGA------------D--LV--LQISKESPQ 229 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC------------S--EE--EECSSCCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCC------------C--EE--EcCcccccc
Confidence 3578999999975 777777776 588 799999744 5555532 231 1 11 22220 0
Q ss_pred c---cc-cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 114 D---HI-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 114 ~---~~-~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
+ .. ....+.+|+|+-.- .....+....+.|+++|.+++..
T Consensus 230 ~~~~~i~~~~~~g~D~vid~~------g~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 230 EIARKVEGQLGCKPEVTIECT------GAEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHHHHHHHHTSCCSEEEECS------CCHHHHHHHHHHSCTTCEEEECS
T ss_pred hHHHHHHHHhCCCCCEEEECC------CChHHHHHHHHHhcCCCEEEEEe
Confidence 0 00 01124799998642 22356777888999999876643
No 321
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.02 E-value=0.47 Score=37.24 Aligned_cols=82 Identities=18% Similarity=0.182 Sum_probs=52.3
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech------------h-HHHHHHHHHHHhhhccccCCCCCCCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI------------E-VLPLLKRNVEWNTSRISQMNPGSDLLGS 102 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~------------~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 102 (199)
..+++++||=-|++.|+ ++..++..|++|+++|.+ . .++.+...+... ..+
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 72 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------------GRK 72 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------------TSC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-------------CCc
Confidence 35789999999997764 555666779999999853 2 333333333332 236
Q ss_pred EEEEEeeeCCCcccc-------ccCCCccEEEEecccc
Q 029065 103 IQAVELDWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 103 i~~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+.+..+|+.+..... ..-++.|++|.+.-+.
T Consensus 73 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 73 AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 788888887654221 1124789998876553
No 322
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.99 E-value=0.067 Score=43.64 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=57.9
Q ss_pred CCCCCcEEEeCCCc-ChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-
Q 029065 40 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~-G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~- 115 (199)
.-+|.+||-.|+|. |...+.+|+ .|++|+++|.+ +-++.+++ .+.. . .+|..+.+.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~------------~----~i~~~~~~~~ 223 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAE------------V----AVNARDTDPA 223 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS------------E----EEETTTSCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCC------------E----EEeCCCcCHH
Confidence 34678999999975 888888886 48999999974 45555433 2311 1 122222111
Q ss_pred --ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 --IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 --~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
.....+.+|+|+-.- .-...++...+.|+++|.+.+.
T Consensus 224 ~~~~~~~g~~d~vid~~------g~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 224 AWLQKEIGGAHGVLVTA------VSPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HHHHHHHSSEEEEEESS------CCHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHhCCCCCEEEEeC------CCHHHHHHHHHHhccCCEEEEe
Confidence 001123788887542 2346778888899999987665
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.90 E-value=0.016 Score=47.73 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=55.6
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHhh-CC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGC-GVAGFGMALL-GC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~~-g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
-+|.+||=+|+|. |..++.+|+. |+ +|+++|.++ -++.+++ .+.. .+ +|..+.+..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--------------~v--i~~~~~~~~ 224 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGAT--------------DI--INYKNGDIV 224 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCC--------------EE--ECGGGSCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCc--------------eE--EcCCCcCHH
Confidence 3578999999976 7778777764 88 699999844 5555543 2211 11 222111100
Q ss_pred ----c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 ----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ----~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. .....+|+|+-.- .-...+....+.|+++|.+.+.
T Consensus 225 ~~v~~~t~g~g~D~v~d~~------g~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 225 EQILKATDGKGVDKVVIAG------GDVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HHHHHHTTTCCEEEEEECS------SCTTHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHcCCCCCCEEEECC------CChHHHHHHHHHHhcCCEEEEe
Confidence 0 1123699998542 2235677788889998886643
No 324
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.84 E-value=0.47 Score=37.70 Aligned_cols=81 Identities=23% Similarity=0.226 Sum_probs=51.5
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-h-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-E-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
..+++++||=.|++.|+ ++..++..|++|+++|.+ + ..+.+...+... ..++.+..+|..+.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~ 109 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-------------GVKCVLLPGDLSDE 109 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-------------TCCEEEEESCTTSH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-------------CCcEEEEECCCCCH
Confidence 45689999999987764 455566679999999863 2 334333333332 23677888888765
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ..-++.|++|.+.-+
T Consensus 110 ~~v~~~~~~~~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 110 QHCKDIVQETVRQLGSLNILVNNVAQ 135 (291)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 4211 112478999877443
No 325
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.83 E-value=0.2 Score=41.01 Aligned_cols=93 Identities=19% Similarity=0.145 Sum_probs=56.7
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC-Ccc-
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-EDH- 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~- 115 (199)
-+|.+||-+|+|. |...+.+|+ .|++|+++|.+ +-++.+++ .+. + .+ +|..+ .+.
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa------------~--~~--~~~~~~~~~~ 226 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGA------------D--VT--LVVDPAKEEE 226 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC------------S--EE--EECCTTTSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCC------------C--EE--EcCcccccHH
Confidence 3578999999875 777777775 58899999974 35555542 231 1 11 22221 110
Q ss_pred --cc--cc---CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 116 --IK--AV---APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 116 --~~--~~---~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.. .. ...+|+|+-+- .....+....+.|+++|.+++..
T Consensus 227 ~~i~~~~~~~~g~g~D~vid~~------g~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 227 SSIIERIRSAIGDLPNVTIDCS------GNEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHHHHHHHSSSCCSEEEECS------CCHHHHHHHHHHSCTTCEEEECS
T ss_pred HHHHHHhccccCCCCCEEEECC------CCHHHHHHHHHHHhcCCEEEEEe
Confidence 00 11 24699998642 12346777888999999876643
No 326
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.80 E-value=0.24 Score=41.28 Aligned_cols=97 Identities=22% Similarity=0.178 Sum_probs=59.6
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~- 115 (199)
-+|.+||-+|||. |+.++.+|+ .|+ +|+++|.+ +-++.+++ .+. + ..+....+.
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa---------------~--~i~~~~~~~~ 242 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF---------------E--IADLSLDTPL 242 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---------------E--EEETTSSSCH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC---------------c--EEccCCcchH
Confidence 3678999999976 888888886 488 59999974 45555533 221 2 133322110
Q ss_pred ---c-cc-cCCCccEEEEeccc---------cCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 ---I-KA-VAPPFDYIIGTDVV---------YAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 ---~-~~-~~~~fD~Ii~~~~~---------~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. .. ....+|+|+-.-.. ++.......+....+.|+++|.+++.
T Consensus 243 ~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 243 HEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 0 01 12469999854221 12233445788888999999987654
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.80 E-value=0.04 Score=45.76 Aligned_cols=92 Identities=25% Similarity=0.277 Sum_probs=53.6
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCCeEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
-+|.+||-+|+|. |...+.+|+ .|++|+++|. ++-++.+++ .+. .. + +|..+.+...
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa------------~~--v--i~~~~~~~~~ 252 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGA------------DE--V--VNSRNADEMA 252 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTC------------SE--E--EETTCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC------------cE--E--eccccHHHHH
Confidence 3578999999975 777777775 5899999997 446666543 221 11 1 2222111111
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
...+.+|+|+-.-. . ...+....+.++++|.+++.
T Consensus 253 ~~~~g~Dvvid~~g--~----~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 253 AHLKSFDFILNTVA--A----PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp TTTTCEEEEEECCS--S----CCCHHHHHTTEEEEEEEEEC
T ss_pred HhhcCCCEEEECCC--C----HHHHHHHHHHhccCCEEEEe
Confidence 11257898875421 1 12355566778888876553
No 328
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.71 E-value=0.52 Score=38.26 Aligned_cols=109 Identities=16% Similarity=0.143 Sum_probs=70.8
Q ss_pred CcEEEeCCCcChHHHHHHh-hCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc----
Q 029065 44 KRVIELGAGCGVAGFGMAL-LGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA---- 118 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~-~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~---- 118 (199)
..|++||||.=.-...+.. .+.+|+=+|.+.++...++.+...+.. ...+..++..|+.+ .....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~---------~~~~~~~v~~Dl~d-~~~~~l~~~ 173 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVT---------PTADRREVPIDLRQ-DWPPALRSA 173 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCC---------CSSEEEEEECCTTS-CHHHHHHHT
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCC---------CCCCeEEEecchHh-hHHHHHHhc
Confidence 4799999997655444442 246788899888888888877654321 13456777788765 21111
Q ss_pred --cCCCccEEEEeccccC--CcChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 119 --VAPPFDYIIGTDVVYA--EHLLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 119 --~~~~fD~Ii~~~~~~~--~~~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.....-++++-.++++ ......+++.+...+.||+.+.+.....
T Consensus 174 g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 174 GFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp TCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred cCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 1123445566666655 4467788999998888888877766543
No 329
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.63 E-value=0.056 Score=44.65 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=32.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhh-C--CeEEEeec-hhHHHHHH
Q 029065 42 KGKRVIELGAGCGVAGFGMALL-G--CNVITTDQ-IEVLPLLK 80 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~-g--~~v~~~D~-~~~l~~a~ 80 (199)
+|..++|..||.|-.+..++.. + .+|+++|. +.+++.++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 4779999999999999988865 3 47999999 45888874
No 330
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.61 E-value=0.64 Score=36.25 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=52.9
Q ss_pred CCCCCcEEEeCCCc--Ch---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 40 KLKGKRVIELGAGC--GV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 40 ~~~~~~VLdlGcG~--G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
.++||++|=-|++. |+ ++..++..|++|+.+|.+ +.++.+.+.+...+ ..++.+..+|..+.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN------------QPEAHLYQIDVQSD 70 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT------------CSSCEEEECCTTCH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------CCcEEEEEccCCCH
Confidence 47899999999632 53 667777889999999984 36666555444332 23567778888765
Q ss_pred cccc-------ccCCCccEEEEecc
Q 029065 114 DHIK-------AVAPPFDYIIGTDV 131 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~ 131 (199)
+... ..-++.|+++.+.-
T Consensus 71 ~~v~~~~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 71 EEVINGFEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEeccc
Confidence 4221 11268999987744
No 331
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.46 E-value=0.24 Score=39.09 Aligned_cols=82 Identities=23% Similarity=0.245 Sum_probs=56.7
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++||++|=-|++.|+ ++..++..|++|+.+|.+ +.++.+.+.+...+ .++....+|..+.+.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-------------~~~~~~~~Dv~~~~~ 72 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------------YDAHGVAFDVTDELA 72 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------CCEEECCCCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEeeCCCHHH
Confidence 5789999999998874 667777889999999984 46565555554443 256777788776542
Q ss_pred c-------cccCCCccEEEEeccccC
Q 029065 116 I-------KAVAPPFDYIIGTDVVYA 134 (199)
Q Consensus 116 ~-------~~~~~~fD~Ii~~~~~~~ 134 (199)
. ...-++.|++|.+.-+..
T Consensus 73 v~~~~~~~~~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 73 IEAAFSKLDAEGIHVDILINNAGIQY 98 (255)
T ss_dssp HHHHHHHHHHTTCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHCCCCcEEEECCCCCC
Confidence 2 122367999998865543
No 332
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.45 E-value=0.7 Score=35.89 Aligned_cols=81 Identities=14% Similarity=0.089 Sum_probs=51.3
Q ss_pred CCCCCcEEEeCCC--cCh---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 40 KLKGKRVIELGAG--CGV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 40 ~~~~~~VLdlGcG--~G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
.+++++||=.|++ .|+ ++..++..|++|++++.++ ..+.+.+.....+ ..++.+..+|..+.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~ 71 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD------------RNDSIILPCDVTND 71 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS------------SCCCEEEECCCSSS
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC------------CCCceEEeCCCCCH
Confidence 3678999999986 554 5566667799999998643 4344333332221 12578888888766
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ...++.|+++.+.-+
T Consensus 72 ~~v~~~~~~~~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 72 AEIETCFASIKEQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCeeEEEEcccc
Confidence 4321 112478998877544
No 333
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.31 E-value=0.18 Score=39.90 Aligned_cols=80 Identities=20% Similarity=0.277 Sum_probs=56.8
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
+++||.+|=-|++.|+ ++..++..|++|+.+|.+ +.++.+.+.+...+ .++.+..+|..+.+.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-------------~~~~~~~~Dvt~~~~ 70 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-------------KEVLGVKADVSKKKD 70 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence 4689999999998875 667777889999999984 46666666655443 367778888876643
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+.-+
T Consensus 71 v~~~~~~~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 71 VEEFVRRTFETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCcc
Confidence 21 112589999987543
No 334
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.09 E-value=0.062 Score=43.28 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=40.0
Q ss_pred CcEEEEEeeeCCCccccccCCCccEEEEeccccCCcC--------------------hHHHHHHHHHhcCCCcEEEEEEE
Q 029065 101 GSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHL--------------------LEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 101 ~~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~~--------------------~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
..+.+.+.|+.+... ...+++||+|++++|++.... +..++..+.++|+|+|.+++...
T Consensus 20 ~~~~i~~gD~~~~l~-~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLA-SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHT-TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHh-hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 356777877754211 122468999999999864211 24567788899999999988754
No 335
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.04 E-value=0.12 Score=42.93 Aligned_cols=93 Identities=20% Similarity=0.196 Sum_probs=57.3
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~- 115 (199)
-+|.+||=+|+|. |..++.+|+ .|+ +|+++|.++ -++.+++ .+.. .+ .|....+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--------------~v--i~~~~~~~~ 240 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT--------------AT--VDPSAGDVV 240 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS--------------EE--ECTTSSCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC--------------EE--ECCCCcCHH
Confidence 3578999999975 777777775 488 799999744 5555543 2311 11 12211110
Q ss_pred --c-c---ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 116 --I-K---AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 116 --~-~---~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
. . ...+.+|+|+-+- .....+....+.|+++|.+++..
T Consensus 241 ~~i~~~~~~~~gg~Dvvid~~------G~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 241 EAIAGPVGLVPGGVDVVIECA------GVAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp HHHHSTTSSSTTCEEEEEECS------CCHHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHhhhhccCCCCCEEEECC------CCHHHHHHHHHHhccCCEEEEEe
Confidence 0 0 1124799988642 22467788888999999876654
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.86 E-value=0.14 Score=42.29 Aligned_cols=91 Identities=18% Similarity=0.184 Sum_probs=57.3
Q ss_pred CCCcEEEeC-CCc-ChHHHHHHhh--CCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc--
Q 029065 42 KGKRVIELG-AGC-GVAGFGMALL--GCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED-- 114 (199)
Q Consensus 42 ~~~~VLdlG-cG~-G~~sl~la~~--g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-- 114 (199)
+|.+||=.| +|. |..++.+|+. |++|+++|.+ +-++.+++ .+.. .+ +|.....
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad------------~v----i~~~~~~~~ 230 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH------------HV----IDHSKPLAA 230 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS------------EE----ECTTSCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC------------EE----EeCCCCHHH
Confidence 577999999 665 8889899974 7789999984 45555543 2311 11 1221110
Q ss_pred cc-cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 115 HI-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 115 ~~-~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
.. ....+.+|+|+-+ ..-...+....+.|+++|.+++.
T Consensus 231 ~v~~~~~~g~Dvvid~------~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 231 EVAALGLGAPAFVFST------THTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHTTCSCCEEEEEEC------SCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhcCCCceEEEEC------CCchhhHHHHHHHhcCCCEEEEE
Confidence 00 1123479988764 23345778888999999997765
No 337
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.59 E-value=0.44 Score=37.08 Aligned_cols=83 Identities=24% Similarity=0.286 Sum_probs=54.5
Q ss_pred CCCCCCcEEEeCC-CcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 39 SKLKGKRVIELGA-GCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 39 ~~~~~~~VLdlGc-G~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
..+++++||=.|+ |.|+ +...++..|++|+++|.+ +.++.+...+.... ..++.+..+|+.+.
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG------------LGRVEAVVCDVTST 85 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC------------SSCEEEEECCTTCH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC------------CCceEEEEeCCCCH
Confidence 4568999999998 6765 556666779999999973 34454444443221 24688888888765
Q ss_pred cccc-------ccCCCccEEEEecccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+... ..-++.|++|.+.-+.
T Consensus 86 ~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 86 EAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 4221 1124789998876553
No 338
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.56 E-value=1.3 Score=36.79 Aligned_cols=104 Identities=16% Similarity=0.078 Sum_probs=64.4
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
.+.+||-|+.+.|.+++.++..+. +...|.--....++.|+..|++. ...+.+. +.. .....
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~~-~~~~ds~~~~~~~~~n~~~~~~~----------~~~~~~~--~~~-----~~~~~ 99 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHKP-YSIGDSYISELATRENLRLNGID----------ESSVKFL--DST-----ADYPQ 99 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGCC-EEEESCHHHHHHHHHHHHHTTCC----------GGGSEEE--ETT-----SCCCS
T ss_pred CCCCEEEECCCCCHHHHhhccCCc-eEEEhHHHHHHHHHHHHHHcCCC----------ccceEec--ccc-----ccccc
Confidence 456899999999999998875433 23346322445677899888752 1124432 211 12246
Q ss_pred CccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEEecCh
Q 029065 122 PFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYEIRST 164 (199)
Q Consensus 122 ~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~ 164 (199)
.||+|+.--+ -........+..+...|.+++.+++....+..
T Consensus 100 ~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~ 141 (375)
T 4dcm_A 100 QPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKARDI 141 (375)
T ss_dssp SCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGC
T ss_pred CCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEecccch
Confidence 7999887422 22233445556666667899999888776543
No 339
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=92.47 E-value=0.42 Score=37.62 Aligned_cols=85 Identities=18% Similarity=0.244 Sum_probs=54.4
Q ss_pred cCCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 36 FCPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 36 ~~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
+.+..++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+.... ..++.+..+|+.
T Consensus 20 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~ 87 (277)
T 4fc7_A 20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT------------GRRCLPLSMDVR 87 (277)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTT
T ss_pred CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCcEEEEEcCCC
Confidence 45677899999999997764 455566679999999973 34443333332211 236778888887
Q ss_pred CCcccc-------ccCCCccEEEEeccc
Q 029065 112 NEDHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 112 ~~~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+..... ..-++.|++|.+.-+
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 88 APPAVMAAVDQALKEFGRIDILINCAAG 115 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 654221 112479999877543
No 340
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=92.26 E-value=0.36 Score=38.07 Aligned_cols=83 Identities=20% Similarity=0.317 Sum_probs=52.6
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
+..++++++|=.|++.|+ ++..++..|++|+++|.++.++.....+... ..++.+..+|+.+.+
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~ 92 (273)
T 3uf0_A 26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADG-------------GGSAEAVVADLADLE 92 (273)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTT-------------TCEEEEEECCTTCHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHH
Confidence 456789999999997764 5556667799999998644333333333222 235777888887654
Q ss_pred cccc------cCCCccEEEEecccc
Q 029065 115 HIKA------VAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~~------~~~~fD~Ii~~~~~~ 133 (199)
.... ..++.|++|.+.-+.
T Consensus 93 ~v~~~~~~~~~~g~iD~lv~nAg~~ 117 (273)
T 3uf0_A 93 GAANVAEELAATRRVDVLVNNAGII 117 (273)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhcCCCcEEEECCCCC
Confidence 2211 115799999876554
No 341
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.16 E-value=1.3 Score=34.60 Aligned_cols=83 Identities=16% Similarity=0.209 Sum_probs=49.9
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=.|++.|+ +...++..|++|++++.+ +.++.+...+...+. ...+.+..+|+.+.+
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~ 96 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-----------PGTLIPYRCDLSNEE 96 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------SSEEEEEECCTTCHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-----------CceEEEEEecCCCHH
Confidence 34678999999876553 344455669999999873 344444443333221 135677778876554
Q ss_pred ccc-------ccCCCccEEEEeccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~ 132 (199)
... ...+++|++|.+..+
T Consensus 97 ~v~~~~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 97 DILSMFSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCC
Confidence 221 011478999877554
No 342
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.13 E-value=0.047 Score=44.61 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=30.4
Q ss_pred CCCCCcEEEeCCCc--ChHHHHHHh-hCCeEEEeech-hHHHHHHH
Q 029065 40 KLKGKRVIELGAGC--GVAGFGMAL-LGCNVITTDQI-EVLPLLKR 81 (199)
Q Consensus 40 ~~~~~~VLdlGcG~--G~~sl~la~-~g~~v~~~D~~-~~l~~a~~ 81 (199)
.-+|.+||=+|+|. |...+.+++ .|++|+++|.+ +-++.+++
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 34678999999974 666666665 59999999974 45565544
No 343
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=92.06 E-value=1.2 Score=35.05 Aligned_cols=81 Identities=21% Similarity=0.295 Sum_probs=49.3
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-h-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-E-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.++++++|=.|++.|+ +...++..|++|++++.+ + ..+.+...+...+ .++.+..+|..+.+
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 92 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------------SDAACVKANVGVVE 92 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-------------CCeEEEEcCCCCHH
Confidence 4678999988887664 445555679999999863 2 3444433333322 25677777876553
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 93 ~~~~~~~~~~~~~g~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 93 DIVRMFEEAVKIFGKLDIVCSNSGVV 118 (283)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 221 0124789998875543
No 344
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=92.00 E-value=1.6 Score=33.98 Aligned_cols=84 Identities=12% Similarity=0.004 Sum_probs=54.3
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHH-hhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEW-NTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
+..++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.+...+.. .+ ..++.+..+|..+
T Consensus 3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~------------~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP------------GARLFASVCDVLD 70 (265)
T ss_dssp CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST------------TCCEEEEECCTTC
T ss_pred ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC------------CceEEEEeCCCCC
Confidence 345789999999998764 555666779999999974 455555444433 21 2247788888876
Q ss_pred Ccccc-------ccCCCccEEEEecccc
Q 029065 113 EDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 113 ~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.+... ..-++.|++|.+.-+.
T Consensus 71 ~~~v~~~~~~~~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 71 ALQVRAFAEACERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHHHHHHHHHHHHCSCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 54221 1125789998876543
No 345
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.97 E-value=1.4 Score=34.96 Aligned_cols=81 Identities=17% Similarity=0.107 Sum_probs=51.4
Q ss_pred CCCCCCcEEEeCCC--cCh---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 39 SKLKGKRVIELGAG--CGV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 39 ~~~~~~~VLdlGcG--~G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
..+++++||=.|++ .|+ ++..++..|++|++++.++ ..+.++......+ .+.+..+|+.+
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~Dv~d 92 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--------------AFVAGHCDVAD 92 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--------------CEEEEECCTTC
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--------------CceEEECCCCC
Confidence 45789999999986 343 5566667799999998754 3333333322221 46777888876
Q ss_pred Ccccc-------ccCCCccEEEEecccc
Q 029065 113 EDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 113 ~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.+... ..-++.|++|.+.-+.
T Consensus 93 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 93 AASIDAVFETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 54221 1125799998875543
No 346
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=91.92 E-value=0.37 Score=37.51 Aligned_cols=83 Identities=19% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
+..++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.+...+... ..++.+..+|..+.
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-------------GGKAIGLECNVTDE 73 (256)
T ss_dssp TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-------------TCCEEEEECCTTCH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCH
Confidence 445789999999987764 555666779999999974 3555554444433 23677788888765
Q ss_pred cccc-------ccCCCccEEEEecccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.... ..-++.|+++.+.-+.
T Consensus 74 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 74 QHREAVIKAALDQFGKITVLVNNAGGG 100 (256)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 4221 1124789998875543
No 347
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.92 E-value=0.049 Score=44.90 Aligned_cols=39 Identities=26% Similarity=0.217 Sum_probs=28.7
Q ss_pred CCCcEEEeCCCc-ChHHHHHHh-hCCeEEEeechh-HHHHHH
Q 029065 42 KGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQIE-VLPLLK 80 (199)
Q Consensus 42 ~~~~VLdlGcG~-G~~sl~la~-~g~~v~~~D~~~-~l~~a~ 80 (199)
+|.+||=+|+|. |...+.+|+ .|++|+++|.++ -++.++
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL 221 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 688999999875 777777775 489999999743 444443
No 348
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=91.89 E-value=1.6 Score=34.65 Aligned_cols=80 Identities=24% Similarity=0.270 Sum_probs=51.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-------------hHHHHHHHHHHHhhhccccCCCCCCCCCcE
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGSI 103 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-------------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i 103 (199)
.++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.+...+... ..++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 91 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-------------GRRI 91 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCCE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-------------CCce
Confidence 4678999999998774 556666779999999853 2333333333332 2367
Q ss_pred EEEEeeeCCCcccc-------ccCCCccEEEEeccc
Q 029065 104 QAVELDWGNEDHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 104 ~~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
.+..+|..+..... ..-++.|++|.+.-+
T Consensus 92 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 92 IASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 88888887654221 112579999877554
No 349
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.88 E-value=0.029 Score=42.02 Aligned_cols=91 Identities=19% Similarity=0.191 Sum_probs=52.9
Q ss_pred CCCCcEEEeCCC--cChHHHHHH-hhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAG--CGVAGFGMA-LLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG--~G~~sl~la-~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
-+|++||-.|++ .|.....++ ..|++|+++|.++ .++.+++ .+. .. ..|..+.+..
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~-------------~~---~~d~~~~~~~ 96 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGV-------------EY---VGDSRSVDFA 96 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCC-------------SE---EEETTCSTHH
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC-------------CE---EeeCCcHHHH
Confidence 467899999953 455444444 4599999999743 4443322 221 11 1233322110
Q ss_pred ----c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 ----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ----~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. .....+|+++.+.. ...+....+.++++|.+++.
T Consensus 97 ~~~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 97 DEILELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HHHHHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEE
Confidence 0 11246999986531 25677888899999987654
No 350
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.85 E-value=0.91 Score=36.12 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=51.9
Q ss_pred CCCCCCCcEEEeCCCc--Ch---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 38 PSKLKGKRVIELGAGC--GV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~--G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
...+++++||=.|++. |+ ++..++..|++|+++|.++ ..+.+.......+ .+.+..+|+.
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~Dv~ 90 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--------------VKLTVPCDVS 90 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--------------CCEEEECCTT
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--------------CeEEEEcCCC
Confidence 3457899999999854 53 5666667799999999743 4444443333322 3467778887
Q ss_pred CCcccc-------ccCCCccEEEEecccc
Q 029065 112 NEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 112 ~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+.+... ..-++.|++|.+.-+.
T Consensus 91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 91 DAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 654221 1125789999876543
No 351
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=91.85 E-value=0.45 Score=37.26 Aligned_cols=84 Identities=20% Similarity=0.247 Sum_probs=54.2
Q ss_pred CCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 37 CPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
++..+++++||=.|++.|+ ++..++..|++|++++. +. ..+.....+...+ .++.+..+|..
T Consensus 23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~ 89 (271)
T 4iin_A 23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-------------YKAAVIKFDAA 89 (271)
T ss_dssp -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTT
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CceEEEECCCC
Confidence 4566789999999987764 45556667999999986 33 5454444444332 36778888887
Q ss_pred CCcccc-------ccCCCccEEEEecccc
Q 029065 112 NEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 112 ~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+..... ...++.|++|.+.-+.
T Consensus 90 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 118 (271)
T 4iin_A 90 SESDFIEAIQTIVQSDGGLSYLVNNAGVV 118 (271)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 654221 1124799998876553
No 352
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=91.82 E-value=0.91 Score=35.51 Aligned_cols=82 Identities=23% Similarity=0.226 Sum_probs=52.6
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-------------hHHHHHHHHHHHhhhccccCCCCCCCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGS 102 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-------------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 102 (199)
..+++++||=-|++.|+ ++..++..|++|+++|.+ +.++.....+... ..+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 75 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-------------GSR 75 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-------------TCC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-------------CCe
Confidence 45789999999987664 556666779999999853 2333333333332 236
Q ss_pred EEEEEeeeCCCccccc-------cCCCccEEEEecccc
Q 029065 103 IQAVELDWGNEDHIKA-------VAPPFDYIIGTDVVY 133 (199)
Q Consensus 103 i~~~~~d~~~~~~~~~-------~~~~fD~Ii~~~~~~ 133 (199)
+.+..+|+.+.+.... .-++.|++|.+.-+.
T Consensus 76 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 76 IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 7888888876542211 124799999876554
No 353
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.82 E-value=0.13 Score=43.15 Aligned_cols=41 Identities=29% Similarity=0.375 Sum_probs=30.4
Q ss_pred CCCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeech-hHHHHHH
Q 029065 40 KLKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQI-EVLPLLK 80 (199)
Q Consensus 40 ~~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~-~~l~~a~ 80 (199)
.-+|.+||=+|+|. |..++.+|+ .|+ +|+++|.+ +-++.++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 255 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK 255 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 44678999999975 777777775 488 79999974 4555554
No 354
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.79 E-value=0.77 Score=35.57 Aligned_cols=82 Identities=13% Similarity=0.009 Sum_probs=50.8
Q ss_pred CCCCCCCcEEEeCCC--cCh---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 38 PSKLKGKRVIELGAG--CGV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG--~G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
+...++++||=.|++ .|+ ++..++..|++|++++.+. ..+.+++.....+ .+.+..+|..
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~Dv~ 74 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--------------SELVFPCDVA 74 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--------------CCCEEECCTT
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--------------CcEEEECCCC
Confidence 456789999999976 553 4555566799999998743 3333333322221 3567778877
Q ss_pred CCcccc-------ccCCCccEEEEecccc
Q 029065 112 NEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 112 ~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+.+... ...++.|++|.+.-+.
T Consensus 75 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 75 DDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp CHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 654221 1125789998775543
No 355
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.76 E-value=0.76 Score=35.69 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=50.1
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+ + .++.+..+|..+...
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~~~~~ 68 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-------------PRVHALRSDIADLNE 68 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-------------GGEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------------CcceEEEccCCCHHH
Confidence 4678999999987764 555666779999999974 3444333322 1 156777788765542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ...++.|+++.+.-+.
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~ 93 (255)
T 4eso_A 69 IAVLGAAAGQTLGAIDLLHINAGVS 93 (255)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 21 1124789998775443
No 356
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.74 E-value=0.058 Score=44.21 Aligned_cols=91 Identities=22% Similarity=0.199 Sum_probs=54.6
Q ss_pred CCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc--
Q 029065 42 KGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-- 115 (199)
Q Consensus 42 ~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-- 115 (199)
+|.+||-+|+|. |...+.+++ .|+ +|+++|.+ +-++.+++ .+.. .+ +|....+.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~--------------~~--~~~~~~~~~~ 226 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGAD--------------YV--INPFEEDVVK 226 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCS--------------EE--ECTTTSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC--------------EE--ECCCCcCHHH
Confidence 788999999964 776767665 588 89999974 35555542 2210 11 22221110
Q ss_pred -cc-c-cCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 -IK-A-VAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 -~~-~-~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
.. . ....+|+|+-+-. ....+....+.++++|.+++.
T Consensus 227 ~v~~~~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 227 EVMDITDGNGVDVFLEFSG------APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp HHHHHTTTSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHcCCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEE
Confidence 00 0 1236999886522 245677778888888876554
No 357
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.71 E-value=0.17 Score=41.35 Aligned_cols=90 Identities=23% Similarity=0.318 Sum_probs=54.8
Q ss_pred CCCcEEEe-CCCc-ChHHHHHHh-hCCeEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC--cc
Q 029065 42 KGKRVIEL-GAGC-GVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE--DH 115 (199)
Q Consensus 42 ~~~~VLdl-GcG~-G~~sl~la~-~g~~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~ 115 (199)
+|.+||=. |+|. |...+.+++ .|++|+++|. ++-++.+++ .+.. .+ ++..+. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~------------~v----i~~~~~~~~~ 209 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGAD------------IV----LNHKESLLNQ 209 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCS------------EE----ECTTSCHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCc------------EE----EECCccHHHH
Confidence 58899999 4654 777777775 4899999998 445555544 2211 11 121111 00
Q ss_pred c-cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEE
Q 029065 116 I-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILL 157 (199)
Q Consensus 116 ~-~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i 157 (199)
. ....+.+|+|+-+- .-...+....+.|+++|.++.
T Consensus 210 ~~~~~~~g~Dvv~d~~------g~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 210 FKTQGIELVDYVFCTF------NTDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHTCCCEEEEEESS------CHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCCccEEEECC------CchHHHHHHHHHhccCCEEEE
Confidence 0 11234699888642 234567888889999998754
No 358
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.60 E-value=1.2 Score=35.38 Aligned_cols=81 Identities=17% Similarity=0.139 Sum_probs=51.1
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-h--HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-E--VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~--~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
..++++++|=.|++.|+ ++..++..|++|+++|.+ + ..+.+...+... ..++.+..+|+.+
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d 111 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-------------GRKAVLLPGDLSD 111 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-------------TCCEEECCCCTTS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-------------CCcEEEEEecCCC
Confidence 45689999999987764 455566679999999863 2 333333333333 2356777778765
Q ss_pred Ccccc-------ccCCCccEEEEeccc
Q 029065 113 EDHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 113 ~~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
.+... ..-++.|+++.+.-+
T Consensus 112 ~~~v~~~~~~~~~~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 112 ESFARSLVHKAREALGGLDILALVAGK 138 (294)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 53211 112578999877654
No 359
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.58 E-value=0.37 Score=39.67 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=56.3
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC--Cc
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN--ED 114 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~ 114 (199)
-+|.+||=+|+|. |...+.+|+ .|+ +|+++|. ++-++.+++ .+.. .+ +|..+ .+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--------------~v--i~~~~~~~~ 248 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGAT--------------EC--INPQDFSKP 248 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCS--------------EE--ECGGGCSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc--------------eE--ecccccccc
Confidence 3578999999875 777777775 488 6999997 445566543 2211 11 22221 00
Q ss_pred ---cc-cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCC-cEEEEE
Q 029065 115 ---HI-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILLG 158 (199)
Q Consensus 115 ---~~-~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~-g~i~i~ 158 (199)
.. ....+.+|+|+-.- .....+....++++++ |.+++.
T Consensus 249 ~~~~v~~~~~~g~D~vid~~------g~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 249 IQEVLIEMTDGGVDYSFECI------GNVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHHHHHHTTSCBSEEEECS------CCHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHHHHHhCCCCCEEEECC------CcHHHHHHHHHhhccCCcEEEEE
Confidence 00 11124799988542 2245678888999999 987654
No 360
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.53 E-value=0.38 Score=37.07 Aligned_cols=81 Identities=21% Similarity=0.309 Sum_probs=52.8
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+... ..++.+..+|+.+..
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~ 71 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-------------GGTAISVAVDVSDPE 71 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCEEEEEECCTTSHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHH
Confidence 34678999999987664 455556679999999974 4555555544433 235777888887654
Q ss_pred ccc-------ccCCCccEEEEeccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~ 132 (199)
... ...++.|++|.+.-+
T Consensus 72 ~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 72 SAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 221 112479999987654
No 361
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=91.51 E-value=0.32 Score=38.52 Aligned_cols=83 Identities=22% Similarity=0.294 Sum_probs=49.2
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
...++|+++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ...+.+..+|+.+.
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~d~ 95 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT------------GNIVRAVVCDVGDP 95 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTTCH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------CCeEEEEEcCCCCH
Confidence 345689999999987664 445555679999999973 45555544443332 22457778888765
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ..-++.|++|.+.-+
T Consensus 96 ~~v~~~~~~~~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 96 DQVAALFAAVRAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 4221 112578999887654
No 362
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.47 E-value=0.084 Score=43.78 Aligned_cols=92 Identities=15% Similarity=0.087 Sum_probs=56.5
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC--Cc
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN--ED 114 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~ 114 (199)
-+|.+||=+|+|. |+.++.+|+ .|+ +|+++|.+ +-++.+++ .+.. . .+|..+ .+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--------------~--vi~~~~~~~~ 251 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN--------------E--FVNPKDHDKP 251 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC--------------E--EECGGGCSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc--------------E--EEccccCchh
Confidence 3578999999975 777777775 488 69999974 45555532 2211 1 122221 11
Q ss_pred c----ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCC-cEEEEE
Q 029065 115 H----IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPK-TTILLG 158 (199)
Q Consensus 115 ~----~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~-g~i~i~ 158 (199)
. .....+.+|+|+-.- .-...+....+.++++ |.+++.
T Consensus 252 ~~~~i~~~~~gg~D~vid~~------g~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 252 IQEVIVDLTDGGVDYSFECI------GNVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHHHHHHTTSCBSEEEECS------CCHHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHHHHHhcCCCCCEEEECC------CCHHHHHHHHHHhhccCCEEEEE
Confidence 0 011134799988642 2346778888899996 887654
No 363
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.47 E-value=0.44 Score=37.67 Aligned_cols=82 Identities=13% Similarity=0.058 Sum_probs=50.9
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC-c
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-D 114 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~ 114 (199)
..++++||=.|++.|+ ++..++..|++|++++.+ +.++.+...+...+ ..++.+..+|+.+. .
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~~~ 76 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN------------HENVVFHQLDVTDPIA 76 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------------CCSEEEEECCTTSCHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------CCceEEEEccCCCcHH
Confidence 3568899988987664 445555679999999974 34444444443322 24688888998776 3
Q ss_pred cc-------cccCCCccEEEEecccc
Q 029065 115 HI-------KAVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~-------~~~~~~fD~Ii~~~~~~ 133 (199)
.. ....++.|++|.+.-+.
T Consensus 77 ~v~~~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 77 TMSSLADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCccc
Confidence 21 11125799999886554
No 364
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=91.46 E-value=0.79 Score=35.94 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=50.0
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++|=-|++.|+ ++..++..|++|++++. + +.++.+...+...+ .++.+..+|+.+.+
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~ 90 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG-------------GKALTAQADVSDPA 90 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHH
Confidence 4578999999987764 55666677999988854 3 34444444443332 35777788887654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 91 ~v~~~~~~~~~~~g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 91 AVRRLFATAEEAFGGVDVLVNNAGIM 116 (267)
T ss_dssp HHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 221 1124799998876543
No 365
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.44 E-value=1 Score=36.35 Aligned_cols=82 Identities=21% Similarity=0.241 Sum_probs=53.3
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ +...++..|++|++++.+ +.++.+...+...+. ...+.+..+|+.+...
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~~~Dl~~~~~ 73 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-----------GPEVMGVQLDVASREG 73 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEECCTTCHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCeEEEEECCCCCHHH
Confidence 4678899999998775 445555679999999974 455555554443321 1257888888876542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+..+
T Consensus 74 v~~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 74 FKMAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCc
Confidence 21 112578999887654
No 366
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.44 E-value=0.56 Score=36.58 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=53.9
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ .++.+..+|+.+.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~ 74 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-------------RRALSVGTDITDDAQ 74 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHH
Confidence 4678999999998774 556666779999999974 45555555444332 367888888876542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+.-.
T Consensus 75 v~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 75 VAHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCS
T ss_pred HHHHHHHHHHHcCCCcEEEECCCC
Confidence 21 112579999987643
No 367
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=91.42 E-value=1 Score=35.14 Aligned_cols=82 Identities=20% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h---hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I---EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~---~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
..++++++|=-|++.|+ ++..++..|++|++++. . +.++.+...+... ..++.+..+|+.
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~ 73 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-------------GAKVALYQSDLS 73 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-------------TCEEEEEECCCC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-------------CCcEEEEECCCC
Confidence 35678999999988764 44555567999999864 2 2333333333222 236788888887
Q ss_pred CCcccc-------ccCCCccEEEEecccc
Q 029065 112 NEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 112 ~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+.+... ..-++.|++|.+.-+.
T Consensus 74 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 74 NEEEVAKLFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp SHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 654221 1125789998876543
No 368
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.41 E-value=0.082 Score=43.75 Aligned_cols=39 Identities=21% Similarity=0.205 Sum_probs=28.1
Q ss_pred CCCcEEEeCCCc-ChHHHHHHh-hCCeEEEeech-hHHHHHH
Q 029065 42 KGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQI-EVLPLLK 80 (199)
Q Consensus 42 ~~~~VLdlGcG~-G~~sl~la~-~g~~v~~~D~~-~~l~~a~ 80 (199)
+|.+||=+|+|. |...+.+|+ .|++|+++|.+ +-++.++
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL 228 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 678999999864 666666665 48999999974 3444443
No 369
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=91.34 E-value=0.76 Score=35.90 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=53.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=-|++.|+ ++..++..|++|+++|.+ +.++.+...+.... ..++.+..+|..+.+.
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~~ 84 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF------------GTDVHTVAIDLAEPDA 84 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTSTTH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCcEEEEEecCCCHHH
Confidence 4678999999987764 555666779999999973 35555444443311 2367888888876653
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|++|.+.-+.
T Consensus 85 v~~~~~~~~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 85 PAELARRAAEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHHHHHHHHHHHTSCSEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcC
Confidence 21 1124799998875543
No 370
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.28 E-value=0.19 Score=40.94 Aligned_cols=94 Identities=16% Similarity=0.133 Sum_probs=57.7
Q ss_pred CCCCCcEEEeCCCc-ChHHHHHHhh--CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc-
Q 029065 40 KLKGKRVIELGAGC-GVAGFGMALL--GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED- 114 (199)
Q Consensus 40 ~~~~~~VLdlGcG~-G~~sl~la~~--g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~- 114 (199)
.-+|.+||=+|+|. |..++.+|+. +++|+++|.++ -++.+++ .+. +. + .+.....
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa------------~~--~--i~~~~~~~ 228 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGA------------DA--A--VKSGAGAA 228 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTC------------SE--E--EECSTTHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC------------CE--E--EcCCCcHH
Confidence 44678999999976 8888888864 67899999744 5555533 231 11 1 1221110
Q ss_pred -cc-c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 115 -HI-K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 115 -~~-~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.. . .....+|+|+-+- --...+....+.|+++|.+.+..
T Consensus 229 ~~v~~~t~g~g~d~v~d~~------G~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 229 DAIRELTGGQGATAVFDFV------GAQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp HHHHHHHGGGCEEEEEESS------CCHHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHHHhCCCCCeEEEECC------CCHHHHHHHHHHHhcCCEEEEEC
Confidence 00 0 1123799888642 23457888888999999876653
No 371
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.13 E-value=0.41 Score=37.79 Aligned_cols=82 Identities=18% Similarity=0.285 Sum_probs=53.6
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..++++++|=.|++.|+ ++..++..|++|+++|. .+.++.+...+...+ .++.+..+|..+.+
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~d~~ 94 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-------------GKALPIRCDVTQPD 94 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------------CCCEEEECCTTCHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHH
Confidence 45789999999987764 55566677999999997 345555544444332 35677778887654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 95 ~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 95 QVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 221 1124799999876553
No 372
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.11 E-value=0.057 Score=43.96 Aligned_cols=92 Identities=18% Similarity=0.143 Sum_probs=54.9
Q ss_pred CCCCCcEEEeCC-C-cChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGA-G-CGVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGc-G-~G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.-+|.+||=+|+ | .|...+.+++ .|++|+++|.+ +-++.+++ .+. . . ..|....+.
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga-------------~-~--~~~~~~~~~ 205 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGA-------------E-Y--LINASKEDI 205 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC-------------S-E--EEETTTSCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC-------------c-E--EEeCCCchH
Confidence 346889999994 3 4777776665 58999999984 45554433 221 1 1 122222211
Q ss_pred c----c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 I----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 ~----~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. . .....+|+|+-+-. ...+....+.|+++|.+++.
T Consensus 206 ~~~~~~~~~~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 206 LRQVLKFTNGKGVDASFDSVG-------KDTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHHHHHHTTTSCEEEEEECCG-------GGGHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhCCCCceEEEECCC-------hHHHHHHHHHhccCCEEEEE
Confidence 0 0 11346999886532 14567777889999987664
No 373
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.05 E-value=0.62 Score=37.22 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=53.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ..+.+..+|..+.+.
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~ 94 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-------------FDAHGVVCDVRHLDE 94 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHHH
Confidence 4678999999998764 455566679999999974 45555555444332 367788888876542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ...++.|++|.+.-+.
T Consensus 95 v~~~~~~~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 95 MVRLADEAFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcC
Confidence 21 1124799998875543
No 374
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.96 E-value=0.061 Score=43.66 Aligned_cols=92 Identities=17% Similarity=0.111 Sum_probs=54.9
Q ss_pred CCCCcEEEeC-CC-cChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELG-AG-CGVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlG-cG-~G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
-+|.+||=.| +| .|...+.+++ .|++|+++|.+ +-++.+++ .+. . . .+|..+.+..
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga-------------~-~--~~~~~~~~~~ 198 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LGA-------------W-E--TIDYSHEDVA 198 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC-------------S-E--EEETTTSCHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC-------------C-E--EEeCCCccHH
Confidence 4578999999 44 4777777765 59999999974 45555543 221 1 1 1222222110
Q ss_pred ----c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 117 ----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 117 ----~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
. .....+|+|+-+-. . ..+....+.++++|.+++..
T Consensus 199 ~~~~~~~~~~g~Dvvid~~g-----~--~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 199 KRVLELTDGKKCPVVYDGVG-----Q--DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp HHHHHHTTTCCEEEEEESSC-----G--GGHHHHHTTEEEEEEEEECC
T ss_pred HHHHHHhCCCCceEEEECCC-----h--HHHHHHHHHhcCCCEEEEEe
Confidence 0 11247999886532 1 45667778889999876653
No 375
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.86 E-value=0.9 Score=36.17 Aligned_cols=77 Identities=22% Similarity=0.245 Sum_probs=51.5
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++||.+|=-|++.|+ ++..++..|++|+++|.+ +.++.+.+.+ + .+.....+|..+...
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g-------------~~~~~~~~Dv~~~~~ 89 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G-------------GGAVGIQADSANLAE 89 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-------------TTCEEEECCTTCHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C-------------CCeEEEEecCCCHHH
Confidence 4789999999998874 667777789999999984 4555443332 1 134566778766542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+.-+
T Consensus 90 v~~~~~~~~~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 90 LDRLYEKVKAEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 21 112578999877544
No 376
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=90.85 E-value=0.48 Score=36.77 Aligned_cols=79 Identities=28% Similarity=0.254 Sum_probs=53.3
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ .++.+..+|..+.+..
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v 71 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-------------GRIVARSLDARNEDEV 71 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------------CEEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEECcCCCHHHH
Confidence 568899999998774 555666679999999973 45555555544432 3678888888765422
Q ss_pred c-------ccCCCccEEEEecccc
Q 029065 117 K-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~~ 133 (199)
. .. ++.|++|.+.-+.
T Consensus 72 ~~~~~~~~~~-g~id~lv~nAg~~ 94 (252)
T 3h7a_A 72 TAFLNAADAH-APLEVTIFNVGAN 94 (252)
T ss_dssp HHHHHHHHHH-SCEEEEEECCCCC
T ss_pred HHHHHHHHhh-CCceEEEECCCcC
Confidence 1 12 5789998876553
No 377
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.75 E-value=0.5 Score=36.87 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=53.4
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ..++.+..+|..+..
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~ 73 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG------------SGKVIGVQTDVSDRA 73 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS------------SSCEEEEECCTTSHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC------------CCcEEEEEcCCCCHH
Confidence 35678999999987664 455566679999999974 35554444443322 236788888887654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 74 ~v~~~~~~~~~~~g~id~lvnnAg~~ 99 (262)
T 3pk0_A 74 QCDALAGRAVEEFGGIDVVCANAGVF 99 (262)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 221 1124799998876543
No 378
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.57 E-value=1 Score=36.12 Aligned_cols=87 Identities=17% Similarity=0.119 Sum_probs=53.0
Q ss_pred cEEEeCC-C-cChHHHHHHh-hCCeEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-cccc
Q 029065 45 RVIELGA-G-CGVAGFGMAL-LGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-IKAV 119 (199)
Q Consensus 45 ~VLdlGc-G-~G~~sl~la~-~g~~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~ 119 (199)
+||=.|+ | .|...+.+|+ .|++|+++|. ++-++.+++ .+.. . . +|..+... ....
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~------------~-v---i~~~~~~~~~~~~ 208 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS----LGAN------------R-I---LSRDEFAESRPLE 208 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HTCS------------E-E---EEGGGSSCCCSSC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC------------E-E---EecCCHHHHHhhc
Confidence 4999998 4 3888888885 4899999997 445566644 2211 1 1 11111111 1112
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
.+.+|+|+-+- . ...+....+.++++|.+++.
T Consensus 209 ~~~~d~v~d~~------g-~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 209 KQLWAGAIDTV------G-DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp CCCEEEEEESS------C-HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCccEEEECC------C-cHHHHHHHHHHhcCCEEEEE
Confidence 35789877532 1 23788888899999987665
No 379
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=90.56 E-value=1.7 Score=34.18 Aligned_cols=79 Identities=25% Similarity=0.334 Sum_probs=50.2
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+ + ..+.+..+|..+.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~d~~ 88 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G-------------CGAAACRVDVSDEQ 88 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C-------------SSCEEEECCTTCHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-------------CcceEEEecCCCHH
Confidence 45789999999988774 556666779999999974 3444333322 1 24577778887654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 89 ~v~~~~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 89 QIIAMVDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 221 1124789998876553
No 380
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.44 E-value=0.47 Score=38.21 Aligned_cols=91 Identities=23% Similarity=0.197 Sum_probs=53.3
Q ss_pred CCCCcEEEeC-CCc-ChHHHHHHh-hCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELG-AGC-GVAGFGMAL-LGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlG-cG~-G~~sl~la~-~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
-+|.+||=+| +|. |...+.+|+ .|++|++++.++-++.+++ .+.. . .+|....+...
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~----lGa~--------------~--~i~~~~~~~~~ 210 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKA----LGAE--------------Q--CINYHEEDFLL 210 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH----HTCS--------------E--EEETTTSCHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHH----cCCC--------------E--EEeCCCcchhh
Confidence 4678999997 664 888888886 4899998875443444432 2321 1 12332222011
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
.....+|+|+-+- .-.. +....+.++++|.++..
T Consensus 211 ~~~~g~D~v~d~~------g~~~-~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 211 AISTPVDAVIDLV------GGDV-GIQSIDCLKETGCIVSV 244 (321)
T ss_dssp HCCSCEEEEEESS------CHHH-HHHHGGGEEEEEEEEEC
T ss_pred hhccCCCEEEECC------CcHH-HHHHHHhccCCCEEEEe
Confidence 1124689887542 1223 36777888999987654
No 381
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=90.44 E-value=0.42 Score=37.14 Aligned_cols=80 Identities=29% Similarity=0.316 Sum_probs=51.5
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+... ..++.+..+|+.+.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~ 69 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-------------PGQILTVQMDVRNTDD 69 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-------------TTCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence 4678999999987664 455566679999999974 3555444433222 2367888888876542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+.-+
T Consensus 70 v~~~~~~~~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 70 IQKMIEQIDEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 21 112478999877544
No 382
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.37 E-value=0.81 Score=35.57 Aligned_cols=80 Identities=18% Similarity=0.178 Sum_probs=50.2
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEe-ech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITT-DQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~-D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.++++++|=-|++.|+ ++..++..|++|+++ +.+ +..+.+...+... ..++.+..+|..+.+
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~ 71 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-------------GRSALAIKADLTNAA 71 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-------------TSCCEEEECCTTCHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCceEEEEcCCCCHH
Confidence 4678999999988764 555666779999888 443 3444444433332 235677788887654
Q ss_pred ccc-------ccCCCccEEEEeccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~ 132 (199)
... ..-++.|+++.+.-.
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~nAg~ 96 (259)
T 3edm_A 72 EVEAAISAAADKFGEIHGLVHVAGG 96 (259)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCc
Confidence 221 112478999877543
No 383
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=90.30 E-value=1.7 Score=34.12 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=48.8
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC--
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-- 112 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-- 112 (199)
.++++++|=.|++.|+ ++..++..|++|++++. . +.++.+...+.... ..++.+..+|+.+
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~ 87 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER------------SNTAVVCQADLTNSN 87 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS------------TTCEEEEECCCSCST
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc------------CCceEEEEeecCCcc
Confidence 3578899999987664 44555667999999986 3 44444433332110 2357788888876
Q ss_pred --Ccccc-------ccCCCccEEEEeccc
Q 029065 113 --EDHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 113 --~~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
..... ..-++.|++|.+.-+
T Consensus 88 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 88 VLPASCEEIINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp THHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 32111 012478999887554
No 384
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=90.28 E-value=1.3 Score=33.64 Aligned_cols=80 Identities=13% Similarity=0.097 Sum_probs=49.4
Q ss_pred CCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
+++++|=.|++.|+ ++..++..|++|++++.+ +-++.+...+.... ..++.+..+|..+.+...
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~v~ 68 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ------------GVEVFYHHLDVSKAESVE 68 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------------CCeEEEEEeccCCHHHHH
Confidence 36788888886653 445555679999999873 34454444443221 236788888887654321
Q ss_pred cc-------CCCccEEEEecccc
Q 029065 118 AV-------APPFDYIIGTDVVY 133 (199)
Q Consensus 118 ~~-------~~~fD~Ii~~~~~~ 133 (199)
.. -++.|++|.+.-+.
T Consensus 69 ~~~~~~~~~~g~id~li~~Ag~~ 91 (235)
T 3l77_A 69 EFSKKVLERFGDVDVVVANAGLG 91 (235)
T ss_dssp HHCC-HHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCccc
Confidence 11 14789998876553
No 385
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=90.24 E-value=0.59 Score=35.81 Aligned_cols=84 Identities=17% Similarity=0.236 Sum_probs=51.8
Q ss_pred CCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeee--
Q 029065 37 CPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDW-- 110 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~-- 110 (199)
++..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ .....+...|.
T Consensus 8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~d~d~ 75 (247)
T 3i1j_A 8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG------------QPQPLIIALNLEN 75 (247)
T ss_dssp CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------SCCCEEEECCTTT
T ss_pred CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC------------CCCceEEEecccc
Confidence 4567889999999987664 455556679999999974 35555555544432 12455666665
Q ss_pred CCCccc-------cccCCCccEEEEeccc
Q 029065 111 GNEDHI-------KAVAPPFDYIIGTDVV 132 (199)
Q Consensus 111 ~~~~~~-------~~~~~~fD~Ii~~~~~ 132 (199)
.+.... ...-++.|++|.+.-+
T Consensus 76 ~~~~~~~~~~~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 76 ATAQQYRELAARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 322111 0112478999987654
No 386
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=90.22 E-value=0.71 Score=36.38 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=52.4
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.+...+... ..++.+..+|..+...
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~ 96 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-------------GGTAQELAGDLSEAGA 96 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-------------TCCEEEEECCTTSTTH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------------CCeEEEEEecCCCHHH
Confidence 4679999999987764 555566679999999973 3444444444333 2367788888876542
Q ss_pred cc------ccCCCccEEEEeccc
Q 029065 116 IK------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~------~~~~~fD~Ii~~~~~ 132 (199)
.. ...++.|++|.+.-+
T Consensus 97 ~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 97 GTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 21 001579999887654
No 387
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.20 E-value=0.035 Score=45.45 Aligned_cols=90 Identities=16% Similarity=0.161 Sum_probs=53.5
Q ss_pred CCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc--
Q 029065 42 KGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH-- 115 (199)
Q Consensus 42 ~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-- 115 (199)
+|.+||-+|+|. |...+.+|+ .|+ +|+++|.++ -++.+++. .. . .+|..+.+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l---a~----------------~--v~~~~~~~~~~ 222 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY---AD----------------R--LVNPLEEDLLE 222 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT---CS----------------E--EECTTTSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh---HH----------------h--ccCcCccCHHH
Confidence 788999999964 777777775 588 899999743 33333221 00 0 122221110
Q ss_pred -c-cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 -I-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 -~-~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. ......+|+|+-.-. ....++...+.++++|.+++.
T Consensus 223 ~~~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 223 VVRRVTGSGVEVLLEFSG------NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp HHHHHHSSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHhcCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEE
Confidence 0 001346999886421 235677788888999886654
No 388
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.17 E-value=2.3 Score=30.98 Aligned_cols=39 Identities=21% Similarity=0.118 Sum_probs=26.1
Q ss_pred CCCCCcEEEeCCCc-Ch-HHHHHHhh-CCeEEEeechh-HHHH
Q 029065 40 KLKGKRVIELGAGC-GV-AGFGMALL-GCNVITTDQIE-VLPL 78 (199)
Q Consensus 40 ~~~~~~VLdlGcG~-G~-~sl~la~~-g~~v~~~D~~~-~l~~ 78 (199)
...+.+|+=+|+|. |. ++..+... |.+|+++|.++ .++.
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~ 78 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQ 78 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH
Confidence 34567899999874 43 44455566 88999999843 4333
No 389
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=90.16 E-value=0.76 Score=35.42 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=50.5
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ ++..++..|++|++++.+ +.++.+...+...+ .++.+..+|..+.+.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~~~~~ 70 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------------AKVHVLELDVADRQG 70 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHH
Confidence 4678899999987664 445556679999999873 34444444433322 256777888876542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+.-+
T Consensus 71 ~~~~~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 71 VDAAVASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 21 012479999887544
No 390
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=90.15 E-value=0.45 Score=37.54 Aligned_cols=81 Identities=22% Similarity=0.281 Sum_probs=49.5
Q ss_pred CCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 37 CPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
.+..+++++||=.|++.|+ +...++..|++|++++.+ +.++.+...+...+ ...+.+..+|..+
T Consensus 22 ~~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 22 RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------------AASAHYIAGTMED 89 (286)
T ss_dssp CGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------------CSEEEEEECCTTC
T ss_pred ChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------------CCceEEEeCCCCC
Confidence 4455778999988876553 344455669999999973 34444444333322 1256777888775
Q ss_pred Ccccc-------ccCCCccEEEEe
Q 029065 113 EDHIK-------AVAPPFDYIIGT 129 (199)
Q Consensus 113 ~~~~~-------~~~~~fD~Ii~~ 129 (199)
.+... ...++.|++|.+
T Consensus 90 ~~~v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 90 MTFAEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEC
Confidence 43211 012479999876
No 391
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=90.13 E-value=0.71 Score=35.72 Aligned_cols=83 Identities=20% Similarity=0.209 Sum_probs=51.9
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeee--C
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDW--G 111 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~ 111 (199)
+..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ...+.+..+|. .
T Consensus 7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~ 74 (252)
T 3f1l_A 7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET------------GRQPQWFILDLLTC 74 (252)
T ss_dssp TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SCCCEEEECCTTTC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------------CCCceEEEEecccC
Confidence 345789999999987764 455566679999999974 35555444443332 22456677777 3
Q ss_pred CCccc-------cccCCCccEEEEeccc
Q 029065 112 NEDHI-------KAVAPPFDYIIGTDVV 132 (199)
Q Consensus 112 ~~~~~-------~~~~~~fD~Ii~~~~~ 132 (199)
+.... ...-++.|++|.+.-+
T Consensus 75 ~~~~~~~~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 75 TSENCQQLAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp CHHHHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 33211 1113579999987654
No 392
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=90.13 E-value=0.91 Score=35.54 Aligned_cols=80 Identities=18% Similarity=0.126 Sum_probs=50.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ..+.+..+|..+.+.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 84 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------------LNVEGSVCDLLSRTE 84 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence 3678999999987653 445555679999999974 34444433333222 256777788866542
Q ss_pred ccc-------c-CCCccEEEEeccc
Q 029065 116 IKA-------V-APPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~-------~-~~~fD~Ii~~~~~ 132 (199)
... . .++.|++|.+.-+
T Consensus 85 ~~~~~~~~~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 85 RDKLMQTVAHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHHHHHHHHHTTSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCcEEEECCCC
Confidence 210 1 1679999887654
No 393
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.09 E-value=0.18 Score=41.08 Aligned_cols=94 Identities=21% Similarity=0.220 Sum_probs=56.0
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHhh-CCe-EEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGC-GVAGFGMALL-GCN-VITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~~-g~~-v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.+|.+||=.|+|. |..++.+|+. |++ ++++|.++ -++.+++ .+.. .. .|..+.+..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~--------------~~--i~~~~~~~~ 218 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM--------------QT--FNSSEMSAP 218 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS--------------EE--EETTTSCHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe--------------EE--EeCCCCCHH
Confidence 3578999999976 6777777754 776 68889743 5555543 2321 11 222222110
Q ss_pred -----cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEEE
Q 029065 117 -----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGYE 160 (199)
Q Consensus 117 -----~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~~ 160 (199)
......+|+|+-. ......++...++++++|.+.+...
T Consensus 219 ~~~~~~~~~~g~d~v~d~------~G~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 219 QMQSVLRELRFNQLILET------AGVPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp HHHHHHGGGCSSEEEEEC------SCSHHHHHHHHHHCCTTCEEEECCC
T ss_pred HHHHhhcccCCccccccc------ccccchhhhhhheecCCeEEEEEec
Confidence 0113467877654 2335677888889999998776543
No 394
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.05 E-value=1.7 Score=33.23 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=51.6
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++++|=.|++.|+ ++..++..|++|++++.+ +.++.+...+...+ .++.+..+|..+.+..
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~ 69 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-------------FKARGLVLNISDIESI 69 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEecCCCHHHH
Confidence 468899988987664 455566679999999974 35554444443332 3677888888765422
Q ss_pred c-------ccCCCccEEEEecccc
Q 029065 117 K-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~~ 133 (199)
. ...++.|+++.+.-+.
T Consensus 70 ~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 70 QNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 1135789998876554
No 395
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.98 E-value=0.31 Score=39.47 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=53.2
Q ss_pred CCCCcEEEeCCC--cChHHHHHH-hhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC-Ccc
Q 029065 41 LKGKRVIELGAG--CGVAGFGMA-LLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN-EDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG--~G~~sl~la-~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~ 115 (199)
-+|++||-.||+ .|.....++ ..|++|+++|.+ +.++.+++ .+. . ...|..+ .+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~-------------~---~~~d~~~~~~~ 203 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGF-------------D---AAFNYKTVNSL 203 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC-------------S---EEEETTSCSCH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC-------------c---EEEecCCHHHH
Confidence 367899999983 465555555 469999999974 35444421 121 1 1134332 110
Q ss_pred ---c-cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 ---I-KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 ---~-~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. ....+.+|+++.+-. ...+....+.++++|.+++.
T Consensus 204 ~~~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 204 EEALKKASPDGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHhCCCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEE
Confidence 0 011247999886632 13467777889999987654
No 396
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.97 E-value=0.23 Score=40.54 Aligned_cols=60 Identities=3% Similarity=-0.069 Sum_probs=40.3
Q ss_pred cEEEEEeeeCCCccccccCCCccEEEEeccccCCc--------------ChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 102 SIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEH--------------LLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 102 ~i~~~~~d~~~~~~~~~~~~~fD~Ii~~~~~~~~~--------------~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
...+.+.|...... ....++||+|++++|+.... ....++..+.++|+|+|.+++.....
T Consensus 14 ~~~ii~gD~~~~l~-~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 14 NGSMYIGDSLELLE-SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SEEEEESCHHHHGG-GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CceEEeCcHHHHHh-hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 34555555432111 12256899999998875432 46778888899999999998876543
No 397
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=89.94 E-value=2.9 Score=32.80 Aligned_cols=82 Identities=17% Similarity=0.150 Sum_probs=50.9
Q ss_pred cCCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 36 FCPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 36 ~~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
+....+++++||=-|++.|+ ++..++..|++|+++|.+ +.++.+... . ...+.+..+|..
T Consensus 20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~Dv~ 83 (277)
T 4dqx_A 20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---I-------------GSKAFGVRVDVS 83 (277)
T ss_dssp --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---H-------------CTTEEEEECCTT
T ss_pred cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h-------------CCceEEEEecCC
Confidence 34456789999999987764 555566679999999974 333333222 1 125677778887
Q ss_pred CCcccc-------ccCCCccEEEEecccc
Q 029065 112 NEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 112 ~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+..... ..-++.|++|.+.-+.
T Consensus 84 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 112 (277)
T 4dqx_A 84 SAKDAESMVEKTTAKWGRVDVLVNNAGFG 112 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 654221 1124789998876543
No 398
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.93 E-value=0.96 Score=36.98 Aligned_cols=89 Identities=13% Similarity=0.102 Sum_probs=53.8
Q ss_pred CcEEEeCCCc-ChHH-HHHH-h-hCCe-EEEeech-h---HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 44 KRVIELGAGC-GVAG-FGMA-L-LGCN-VITTDQI-E---VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 44 ~~VLdlGcG~-G~~s-l~la-~-~g~~-v~~~D~~-~---~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.+||=+|+|. |+.+ +.+| + .|++ |+++|.+ + -++.+++ .+. +.. |..+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa---------------~~v--~~~~~~ 232 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA---------------TYV--DSRQTP 232 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC---------------EEE--ETTTSC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC---------------ccc--CCCccC
Confidence 8999999965 7777 7777 5 4887 9999973 3 4555532 231 111 222111
Q ss_pred c--ccccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 115 H--IKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 115 ~--~~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
. .....+.+|+|+-.- .-...+....+.++++|.+++..
T Consensus 233 ~~~i~~~~gg~Dvvid~~------g~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 233 VEDVPDVYEQMDFIYEAT------GFPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp GGGHHHHSCCEEEEEECS------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHhCCCCCEEEECC------CChHHHHHHHHHHhcCCEEEEEe
Confidence 0 000023789887542 22346777888899999876543
No 399
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.89 E-value=0.93 Score=35.11 Aligned_cols=79 Identities=15% Similarity=0.128 Sum_probs=49.3
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
+++++||=.|++.|+ +...++..|++|+++|.+ +.++.+...+...+ .++.+..+|+.+.+..
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~ 73 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------------FKVEASVCDLSSRSER 73 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHH
Confidence 578899988886653 445555679999999873 34444433333221 2567777888765322
Q ss_pred cc-------cC-CCccEEEEeccc
Q 029065 117 KA-------VA-PPFDYIIGTDVV 132 (199)
Q Consensus 117 ~~-------~~-~~fD~Ii~~~~~ 132 (199)
.. .- ++.|++|.+.-+
T Consensus 74 ~~~~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 74 QELMNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCCEEEECCCC
Confidence 10 11 679999877554
No 400
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=89.78 E-value=0.78 Score=36.00 Aligned_cols=79 Identities=14% Similarity=0.203 Sum_probs=51.2
Q ss_pred CCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 42 KGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 42 ~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
.++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ..+.+..+|+.+.+...
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~v~ 69 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-------------GTALAQVLDVTDRHSVA 69 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHHH
Confidence 57889989987764 455566779999999974 45555555444332 35677778887654221
Q ss_pred -------ccCCCccEEEEecccc
Q 029065 118 -------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 118 -------~~~~~fD~Ii~~~~~~ 133 (199)
..-++.|++|.+.-+.
T Consensus 70 ~~~~~~~~~~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 70 AFAQAAVDTWGRIDVLVNNAGVM 92 (264)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 1124799998876543
No 401
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=89.77 E-value=0.36 Score=41.77 Aligned_cols=41 Identities=29% Similarity=0.317 Sum_probs=32.8
Q ss_pred CCcEEEeCCCcChHHHHHHhhCCe-EEEeechh-HHHHHHHHH
Q 029065 43 GKRVIELGAGCGVAGFGMALLGCN-VITTDQIE-VLPLLKRNV 83 (199)
Q Consensus 43 ~~~VLdlGcG~G~~sl~la~~g~~-v~~~D~~~-~l~~a~~~~ 83 (199)
..+++||.||.|-+++.+...|.+ |.++|+.+ +++.-+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 358999999999999999998988 88889854 655555553
No 402
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=89.77 E-value=1.2 Score=35.13 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=52.5
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
..++++++|=-|++.|+ ++..++..|++|+++|. + +.++.+...+... ..++.+..+|..+.
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~ 91 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-------------GARVIFLRADLADL 91 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSG
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCH
Confidence 34678999999987764 55566677999999985 3 3444444444333 23678888888766
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ..-++.|++|.+.-+
T Consensus 92 ~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 92 SSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp GGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 4321 112478999877654
No 403
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.61 E-value=2.2 Score=33.87 Aligned_cols=82 Identities=22% Similarity=0.183 Sum_probs=49.6
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++++|=.|++.|+ ++..++..|++|++++.+ +.++.+...+...+. ...++.+..+|+.+.+..
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~~~Dv~d~~~v 93 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV----------PAEKINAVVADVTEASGQ 93 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----------CGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----------CCceEEEEecCCCCHHHH
Confidence 578899988886653 445555679999999974 344444443333210 011567778888765422
Q ss_pred cc-------cCCCccEEEEeccc
Q 029065 117 KA-------VAPPFDYIIGTDVV 132 (199)
Q Consensus 117 ~~-------~~~~fD~Ii~~~~~ 132 (199)
.. .-++.|++|.+.-+
T Consensus 94 ~~~~~~~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 94 DDIINTTLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCc
Confidence 10 12478999887554
No 404
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.57 E-value=0.96 Score=35.34 Aligned_cols=83 Identities=18% Similarity=0.223 Sum_probs=51.5
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
+..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ .++.+..+|+.+.
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------------AKVHTFVVDCSNR 92 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-------------CeEEEEEeeCCCH
Confidence 345778999999976553 344445569999999973 34444444333322 3577888888765
Q ss_pred cccc-------ccCCCccEEEEecccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+... ...+++|++|.+..+.
T Consensus 93 ~~v~~~~~~~~~~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 93 EDIYSSAKKVKAEIGDVSILVNNAGVV 119 (272)
T ss_dssp HHHHHHHHHHHHHTCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCcC
Confidence 4221 1124789998876543
No 405
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.51 E-value=0.95 Score=35.52 Aligned_cols=82 Identities=22% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-------------h-hHHHHHHHHHHHhhhccccCCCCCCCCC
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-------------I-EVLPLLKRNVEWNTSRISQMNPGSDLLG 101 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-------------~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 101 (199)
..++++++|=.|++.|+ ++..++..|++|+++|. + +.++.+...+... ..
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 77 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-------------GR 77 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-------------TC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-------------CC
Confidence 45789999999998764 55666677999999985 2 2334333333322 23
Q ss_pred cEEEEEeeeCCCcccc-------ccCCCccEEEEecccc
Q 029065 102 SIQAVELDWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 102 ~i~~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
++.+..+|..+.+... ..-++.|++|.+.-+.
T Consensus 78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 78 KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 6777888887654221 1124799998875543
No 406
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=89.28 E-value=0.63 Score=36.59 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=51.8
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=-|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ..+.+..+|..+...
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~ 91 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-------------LEGRGAVLNVNDATA 91 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT-------------CCCEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEEeCCCHHH
Confidence 4678999988987664 555666779999999974 35555544444332 245677778765532
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|++|.+.-+.
T Consensus 92 v~~~~~~~~~~~g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 92 VDALVESTLKEFGALNVLVNNAGIT 116 (270)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 21 1124789998876543
No 407
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.28 E-value=0.079 Score=43.08 Aligned_cols=93 Identities=23% Similarity=0.272 Sum_probs=55.1
Q ss_pred CCCCCcEEEeCC-C-cChHHHHHHh-hCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGA-G-CGVAGFGMAL-LGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGc-G-~G~~sl~la~-~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.-+|++||=.|+ | .|...+.+++ .|++|+++|.++ -++.+.+. .+. . . ..|..+.+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~-------------~-~--~~~~~~~~~ 207 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGF-------------D-G--AIDYKNEDL 207 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCC-------------S-E--EEETTTSCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC-------------C-E--EEECCCHHH
Confidence 346889999998 3 4766666664 589999999743 44444221 121 1 1 123222211
Q ss_pred c----cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 I----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 ~----~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. ....+.+|+++-+-. ...+....+.++++|.+++.
T Consensus 208 ~~~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 208 AAGLKRECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEE
Confidence 0 011347999886532 14677888889999987664
No 408
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.22 E-value=0.94 Score=35.19 Aligned_cols=82 Identities=24% Similarity=0.310 Sum_probs=52.5
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
...+++++||=.|++.|+ +...++..|++|++++.+ +.++.+...+...+ ..+.+..+|..+.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-------------GEAESHACDLSHS 90 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTCH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-------------CceeEEEecCCCH
Confidence 355788999999987653 444555679999999974 35555544444332 3577888888765
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ...++.|++|.+..+
T Consensus 91 ~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 91 DAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 4221 112478999887654
No 409
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.03 E-value=0.25 Score=38.87 Aligned_cols=40 Identities=0% Similarity=-0.066 Sum_probs=31.5
Q ss_pred CCCccEEEEeccccCC-c-------------ChHHHHHHHHHhcCCCcEEEEEE
Q 029065 120 APPFDYIIGTDVVYAE-H-------------LLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~-~-------------~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.++||+|++.+|+... . ....++..+.++|+|+|.+++..
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4689999998886543 1 45677788889999999998875
No 410
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=88.97 E-value=0.67 Score=36.43 Aligned_cols=81 Identities=16% Similarity=0.234 Sum_probs=52.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++|+++|=-|++.|+ ++..++..|++|+++|.+ +.++.+.+.+...+ .++.+..+|+.+.+.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~ 89 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG-------------HDAEAVAFDVTSESE 89 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------CCEEECCCCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEcCCCCHHH
Confidence 4679999999987664 555666779999999973 45555544443332 356777778765542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ...++.|+++.+.-+.
T Consensus 90 v~~~~~~~~~~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 90 IIEAFARLDEQGIDVDILVNNAGIQ 114 (271)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCC
Confidence 21 1134799999876553
No 411
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=88.92 E-value=2.1 Score=32.97 Aligned_cols=77 Identities=22% Similarity=0.282 Sum_probs=46.4
Q ss_pred CCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc-
Q 029065 43 GKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK- 117 (199)
Q Consensus 43 ~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~- 117 (199)
++++|=.|++.|+ +...++..|++|++++.+ +.++.+...+...+ .++.+..+|+.+.+...
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~v~~ 68 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------------GHAVAVKVDVSDRDQVFA 68 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEecCCCHHHHHH
Confidence 4678888876653 445555679999999973 34444433333221 25677778887654221
Q ss_pred ------ccCCCccEEEEeccc
Q 029065 118 ------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 118 ------~~~~~fD~Ii~~~~~ 132 (199)
..-++.|++|.+.-+
T Consensus 69 ~~~~~~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 69 AVEQARKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHHHHHHTTCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 112479999887543
No 412
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.91 E-value=0.27 Score=39.95 Aligned_cols=93 Identities=20% Similarity=0.217 Sum_probs=51.4
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-h-CCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-L-GCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~-g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~- 115 (199)
-+|.+||=+|+|. |...+.+++ . |++|+++|.++ -++.+++ .+. ... +|..+.+.
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga-------------~~~---i~~~~~~~~ 221 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGA-------------DVT---INSGDVNPV 221 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTC-------------SEE---EEC-CCCHH
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCC-------------eEE---EeCCCCCHH
Confidence 3578999999986 455555554 4 67899999744 4444332 221 111 22222211
Q ss_pred --cc--ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 116 --IK--AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 116 --~~--~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
.. .....+|+++.. ..-...+....+.++++|.+.+..
T Consensus 222 ~~v~~~t~g~g~d~~~~~------~~~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 222 DEIKKITGGLGVQSAIVC------AVARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp HHHHHHTTSSCEEEEEEC------CSCHHHHHHHHHTEEEEEEEEECC
T ss_pred HHhhhhcCCCCceEEEEe------ccCcchhheeheeecCCceEEEEe
Confidence 00 112346665543 233566777788899988866543
No 413
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=88.79 E-value=0.88 Score=35.82 Aligned_cols=80 Identities=24% Similarity=0.270 Sum_probs=51.0
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-----------------hHHHHHHHHHHHhhhccccCCCCCCC
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-----------------EVLPLLKRNVEWNTSRISQMNPGSDL 99 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-----------------~~l~~a~~~~~~~~~~~~~~~~~~~~ 99 (199)
.++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.+...+...
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 74 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH------------- 74 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-------------
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-------------
Confidence 4678999999998764 556666779999999863 2333332222222
Q ss_pred CCcEEEEEeeeCCCcccc-------ccCCCccEEEEeccc
Q 029065 100 LGSIQAVELDWGNEDHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 100 ~~~i~~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
..++.+..+|..+.+... ..-++.|++|.+.-+
T Consensus 75 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 75 NRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 236788888887654221 112479999887554
No 414
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=88.69 E-value=2.9 Score=34.13 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=53.7
Q ss_pred CCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechh-H-------HHHHHHHHHHhhhccccCCCCCCCCCcEEE
Q 029065 37 CPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIE-V-------LPLLKRNVEWNTSRISQMNPGSDLLGSIQA 105 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~-~-------l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~ 105 (199)
+...++|++||=.|++.|+ ++..++..|++|++++.+. - ++.+...+... ..++.+
T Consensus 39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-------------g~~~~~ 105 (346)
T 3kvo_A 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-------------GGKALP 105 (346)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-------------TCEEEE
T ss_pred cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-------------CCeEEE
Confidence 4567789999999997764 5566667799999998532 1 33333333333 235677
Q ss_pred EEeeeCCCcccc-------ccCCCccEEEEecccc
Q 029065 106 VELDWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 106 ~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
..+|+.+.+... ..-++.|++|.+.-+.
T Consensus 106 ~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 106 CIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 788887654221 1124799999876543
No 415
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=88.67 E-value=1.7 Score=33.48 Aligned_cols=80 Identities=16% Similarity=0.212 Sum_probs=46.8
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.+++++||=.|++.|+ +...++..|++|++++. +. .++.....+... ..++.+..+|+.+.+
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~ 84 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-------------GAQGVAIQADISKPS 84 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-------------CCcEEEEEecCCCHH
Confidence 4578899988875442 33444456999999886 43 444443333322 225677778876553
Q ss_pred cccc-------cCCCccEEEEeccc
Q 029065 115 HIKA-------VAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~~-------~~~~fD~Ii~~~~~ 132 (199)
.... .-+..|+++.+..+
T Consensus 85 ~~~~~~~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 85 EVVALFDKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2211 01378998876543
No 416
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=88.29 E-value=2.8 Score=32.67 Aligned_cols=81 Identities=21% Similarity=0.256 Sum_probs=51.4
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechh--------HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEe
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIE--------VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVEL 108 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~--------~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 108 (199)
.++++++|=.|++.|+ ++..++..|++|++++.+. .++.+...+...+ .++.+..+
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 69 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG-------------GQGLALKC 69 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT-------------SEEEEEEC
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC-------------CeEEEEeC
Confidence 3678999999998764 5556667799999998632 1333333333332 36778888
Q ss_pred eeCCCcccc-------ccCCCccEEEEecccc
Q 029065 109 DWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 109 d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
|..+..... ...++.|++|.+.-+.
T Consensus 70 Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 70 DIREEDQVRAAVAATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence 887654221 1125799998876543
No 417
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=88.27 E-value=3.1 Score=28.93 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=49.6
Q ss_pred CcEEEeCCCc-C-hHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccccc-
Q 029065 44 KRVIELGAGC-G-VAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAV- 119 (199)
Q Consensus 44 ~~VLdlGcG~-G-~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~- 119 (199)
.+|+=+|||. | .++..|...|.+|+++|.+ +.++.++. .+ +.+...|..+.+.+...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g---------------~~~i~gd~~~~~~l~~a~ 68 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG---------------VRAVLGNAANEEIMQLAH 68 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---------------CEEEESCTTSHHHHHHTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC---------------CCEEECCCCCHHHHHhcC
Confidence 3788888875 4 2444555568899999984 45554432 22 34555555443322211
Q ss_pred CCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEE
Q 029065 120 APPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILL 157 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i 157 (199)
-..+|++++.-. .......+-...+.+.|+..++.
T Consensus 69 i~~ad~vi~~~~---~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 69 LECAKWLILTIP---NGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp GGGCSEEEECCS---CHHHHHHHHHHHHHHCSSSEEEE
T ss_pred cccCCEEEEECC---ChHHHHHHHHHHHHHCCCCeEEE
Confidence 246898886522 11122223334455677776444
No 418
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=88.09 E-value=1 Score=35.40 Aligned_cols=80 Identities=14% Similarity=0.136 Sum_probs=52.1
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++||.+|=-|++.|+ ++..++..|++|+.+|.+ +..+.+.. +... ..+..+..+|..+...
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~-~~~~-------------~~~~~~~~~Dv~~~~~ 69 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDA-LAQR-------------QPRATYLPVELQDDAQ 69 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHH-HHHH-------------CTTCEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHH-HHhc-------------CCCEEEEEeecCCHHH
Confidence 4789999999998875 567777889999999863 23333322 2222 2256777788876542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|+++.+.-+.
T Consensus 70 v~~~v~~~~~~~G~iDiLVNnAGi~ 94 (258)
T 4gkb_A 70 CRDAVAQTIATFGRLDGLVNNAGVN 94 (258)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 21 1126899999886553
No 419
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=88.05 E-value=1.8 Score=33.41 Aligned_cols=77 Identities=17% Similarity=0.303 Sum_probs=48.2
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ .++.+..+|+.+....
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v 69 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-------------GQCVPVVCDSSQESEV 69 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-------------SEEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-------------CceEEEECCCCCHHHH
Confidence 467889988876653 445555679999999873 34444444333222 2567777888765421
Q ss_pred c----c----cCCCccEEEEec
Q 029065 117 K----A----VAPPFDYIIGTD 130 (199)
Q Consensus 117 ~----~----~~~~fD~Ii~~~ 130 (199)
. . ..++.|++|.+.
T Consensus 70 ~~~~~~~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 70 RSLFEQVDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHHHhcCCCceEEEECC
Confidence 1 0 135789998876
No 420
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=88.01 E-value=2.1 Score=33.47 Aligned_cols=81 Identities=28% Similarity=0.270 Sum_probs=51.5
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-------------hh-HHHHHHHHHHHhhhccccCCCCCCCCCc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-------------IE-VLPLLKRNVEWNTSRISQMNPGSDLLGS 102 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-------------~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 102 (199)
.++++++|=-|++.|+ ++..++..|++|+++|. +. .++.+...+... ..+
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 74 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-------------NRR 74 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-------------CCe
Confidence 4678999999988764 55666677999999985 22 333333333322 236
Q ss_pred EEEEEeeeCCCcccc-------ccCCCccEEEEecccc
Q 029065 103 IQAVELDWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 103 i~~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+.+..+|..+.+... ..-++.|++|.+.-+.
T Consensus 75 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 75 IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 778888887654221 1125799999876554
No 421
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.00 E-value=4.4 Score=27.90 Aligned_cols=70 Identities=21% Similarity=0.224 Sum_probs=40.4
Q ss_pred CCcEEEeCCCc-Ch-HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccc-
Q 029065 43 GKRVIELGAGC-GV-AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKA- 118 (199)
Q Consensus 43 ~~~VLdlGcG~-G~-~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~- 118 (199)
.++|+=+|||. |. ++..+...|.+|+++|.+ +.++.++. .+ +.+...|..+.+....
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~---------------~~~~~gd~~~~~~l~~~ 66 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG---------------FDAVIADPTDESFYRSL 66 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---------------CEEEECCTTCHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC---------------CcEEECCCCCHHHHHhC
Confidence 56899999865 32 334444568999999984 34443332 22 3455566554432221
Q ss_pred cCCCccEEEEecc
Q 029065 119 VAPPFDYIIGTDV 131 (199)
Q Consensus 119 ~~~~fD~Ii~~~~ 131 (199)
....+|+|+..-.
T Consensus 67 ~~~~~d~vi~~~~ 79 (141)
T 3llv_A 67 DLEGVSAVLITGS 79 (141)
T ss_dssp CCTTCSEEEECCS
T ss_pred CcccCCEEEEecC
Confidence 1247899887643
No 422
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=87.97 E-value=1.2 Score=34.29 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=48.5
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ +...++..|++|+++|.+ +.++...+.+... ..++.+..+|+.+...
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~ 76 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-------------GHDVSSVVMDVTNTES 76 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEecCCCHHH
Confidence 3568899988876553 344445569999999973 3444333333322 2257788888876542
Q ss_pred cccc-------CCCccEEEEeccc
Q 029065 116 IKAV-------APPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~~-------~~~fD~Ii~~~~~ 132 (199)
.... .++.|+++.+..+
T Consensus 77 ~~~~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 77 VQNAVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 2110 1478999877543
No 423
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=87.76 E-value=1.4 Score=34.57 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=51.6
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-------------hHHHHHHHHHHHhhhccccCCCCCCCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGS 102 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-------------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 102 (199)
..++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.....+... ..+
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 72 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-------------GRR 72 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-------------CCe
Confidence 45788999999987764 455566679999999863 2333333333222 236
Q ss_pred EEEEEeeeCCCcccc-------ccCCCccEEEEecccc
Q 029065 103 IQAVELDWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 103 i~~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+.+..+|..+.+... ..-++.|++|.+.-+.
T Consensus 73 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (281)
T 3s55_A 73 CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS 110 (281)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 778888887654221 1124799998876553
No 424
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.73 E-value=3.5 Score=31.09 Aligned_cols=78 Identities=15% Similarity=0.107 Sum_probs=42.9
Q ss_pred CCCCCCCCcEEEeCCCcChHHHH----HHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcE-EEEEeee
Q 029065 37 CPSKLKGKRVIELGAGCGVAGFG----MALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSI-QAVELDW 110 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~~sl~----la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~d~ 110 (199)
+...+++++||=.|+. |.+|.. ++..|.+|++++.+ +.++... .. .+ .+...|+
T Consensus 15 ~~~~l~~~~ilVtGat-G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~---------------~~~~~~~~Dl 74 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGAN-GKVARYLLSELKNKGHEPVAMVRNEEQGPELR----ER---------------GASDIVVANL 74 (236)
T ss_dssp ------CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HT---------------TCSEEEECCT
T ss_pred cccCcCCCeEEEECCC-ChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----hC---------------CCceEEEccc
Confidence 3456789999988864 333444 44569999999863 3322211 11 35 6677777
Q ss_pred CCCccccccCCCccEEEEeccccCCc
Q 029065 111 GNEDHIKAVAPPFDYIIGTDVVYAEH 136 (199)
Q Consensus 111 ~~~~~~~~~~~~fD~Ii~~~~~~~~~ 136 (199)
. +.....-+..|+|+.+.......
T Consensus 75 ~--~~~~~~~~~~D~vi~~ag~~~~~ 98 (236)
T 3e8x_A 75 E--EDFSHAFASIDAVVFAAGSGPHT 98 (236)
T ss_dssp T--SCCGGGGTTCSEEEECCCCCTTS
T ss_pred H--HHHHHHHcCCCEEEECCCCCCCC
Confidence 6 22222235799998776654433
No 425
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=87.71 E-value=1.4 Score=34.46 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=52.3
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
.+++++||=-|++.|+ ++..++..|++|++++. +. .++.+...+... ...+.+..+|+.+.+
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~ 91 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-------------GGEAFAVKADVSQES 91 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-------------CCcEEEEECCCCCHH
Confidence 4678999999987764 55566677999999886 33 445444444333 236777888887654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 92 ~v~~~~~~~~~~~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 92 EVEALFAAVIERWGRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 221 1124789998876554
No 426
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=87.64 E-value=1.3 Score=34.24 Aligned_cols=81 Identities=14% Similarity=0.156 Sum_probs=49.0
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ..+.+..+|+.+.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~ 76 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-------------LSVTGTVCHVGKAE 76 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHH
Confidence 34678899988876653 444555679999999873 34444433333322 25677777876553
Q ss_pred ccc-------ccCCCccEEEEeccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~ 132 (199)
... ..-++.|++|.+.-+
T Consensus 77 ~~~~~~~~~~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 77 DRERLVAMAVNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 211 012478999877543
No 427
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.56 E-value=0.16 Score=41.65 Aligned_cols=91 Identities=15% Similarity=0.200 Sum_probs=53.4
Q ss_pred CCCCcEEEeC-CC-cChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELG-AG-CGVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlG-cG-~G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
-+|.+||=.| +| .|...+.+++ .|++|+++|.+ +-++.+++ .+.. . .+|....+..
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--------------~--~~~~~~~~~~ 225 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAK--------------R--GINYRSEDFA 225 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCS--------------E--EEETTTSCHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC--------------E--EEeCCchHHH
Confidence 3578999995 34 4777766665 59999999974 45555543 2211 1 1222222110
Q ss_pred ----cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 ----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ----~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
....+.+|+|+-+-.- ..+....+.|+++|.+++.
T Consensus 226 ~~~~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 226 AVIKAETGQGVDIILDMIGA-------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHHHHHHSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHhCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEE
Confidence 0113579998865321 2566777888998886654
No 428
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=87.53 E-value=1.3 Score=34.78 Aligned_cols=80 Identities=14% Similarity=0.087 Sum_probs=50.2
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ +...++..|++|+++|.+ +.++.+...+...+ .++.+..+|+.+.+.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~~~~~ 85 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------------VEADGRTCDVRSVPE 85 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence 4678999999987653 445555679999999974 34444444333222 256777788876542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+.-+
T Consensus 86 v~~~~~~~~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 86 IEALVAAVVERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHHHHHHHHHTCSCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 21 112478999877544
No 429
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=87.47 E-value=1.1 Score=34.34 Aligned_cols=80 Identities=23% Similarity=0.302 Sum_probs=47.3
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ +...++..|++|+++|.+ +.++.....+... ..++.+..+|+.+.+.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~ 74 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-------------GGQAFACRCDITSEQE 74 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-------------CCceEEEEcCCCCHHH
Confidence 3578889988865443 333444569999999973 3444443333322 2256777788765542
Q ss_pred cccc-------CCCccEEEEeccc
Q 029065 116 IKAV-------APPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~~-------~~~fD~Ii~~~~~ 132 (199)
.... .+++|+||.+...
T Consensus 75 ~~~~~~~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 75 LSALADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 2111 1378999877544
No 430
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=87.43 E-value=1.5 Score=34.13 Aligned_cols=82 Identities=20% Similarity=0.273 Sum_probs=50.0
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHH-HHhhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNV-EWNTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
...++++++|=.|++.|+ ++..++..|++|++++.+ +.++.+...+ ...+ .++.+..+|+.+
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~Dl~~ 82 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-------------VETMAFRCDVSN 82 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------------CCEEEEECCTTC
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-------------CeEEEEEcCCCC
Confidence 345678999999987653 445555679999999873 3444443333 2221 256777788875
Q ss_pred Ccccc-------ccCCCccEEEEeccc
Q 029065 113 EDHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 113 ~~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
.+... ..-++.|++|.+.-+
T Consensus 83 ~~~v~~~~~~~~~~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 83 YEEVKKLLEAVKEKFGKLDTVVNAAGI 109 (267)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 53221 112478999877554
No 431
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=87.40 E-value=2.6 Score=32.59 Aligned_cols=90 Identities=18% Similarity=0.149 Sum_probs=52.0
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++++||=.|++.|+ +...++..|++|+++|.+ +.++.+...+.... ....+.+..+|+.+.+..
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~D~~~~~~v 73 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-----------EPQKTLFIQCDVADQQQL 73 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-----------CGGGEEEEECCTTSHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-----------CCCceEEEecCCCCHHHH
Confidence 457889999986653 445555679999999873 33333333222110 012567777887755322
Q ss_pred c-------ccCCCccEEEEeccccCCcChHHH
Q 029065 117 K-------AVAPPFDYIIGTDVVYAEHLLEPL 141 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~~~~~~~~~~ 141 (199)
. ..-++.|+++.+.-+.....+...
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~ 105 (267)
T 2gdz_A 74 RDTFRKVVDHFGRLDILVNNAGVNNEKNWEKT 105 (267)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCSSSHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCChhhHHHH
Confidence 1 012468999988665544444433
No 432
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.28 E-value=1.3 Score=34.89 Aligned_cols=81 Identities=10% Similarity=0.090 Sum_probs=49.9
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
-.+++++|=-|++.|+ ++..++..|++|++++.+ +.++.+...+... ...+.+..+|+.+.+.
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~ 87 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-------------GHDVDGSSCDVTSTDE 87 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence 3468899999987764 455666779999999974 3444444444332 2367888888876542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|++|.+.-+.
T Consensus 88 v~~~~~~~~~~~g~id~lv~nAg~~ 112 (279)
T 3sju_A 88 VHAAVAAAVERFGPIGILVNSAGRN 112 (279)
T ss_dssp HHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCC
Confidence 21 1124789998876543
No 433
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=87.28 E-value=1.3 Score=34.41 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=50.2
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ +...++..|++|+++|.+ +.++.+...+..... ..++.+..+|..+.+.
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~ 78 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-----------DAEVLTTVADVSDEAQ 78 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-----------TCCEEEEECCTTSHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----------CceEEEEEccCCCHHH
Confidence 3678999999987664 445556679999999973 344444443332200 1256777788876542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|++|.+.-+
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 79 VEAYVTATTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 21 012478999887544
No 434
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=87.28 E-value=1.3 Score=34.28 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=49.4
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++++|=.|++.|+ +...++..|++|+++|.+ +.++.+...+... ..++.+..+|+.+.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~ 71 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-------------GVEARSYVCDVTSEEAV 71 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-------------TSCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHH
Confidence 578899999987664 445555679999999874 3444443333222 12567777888655321
Q ss_pred c-------ccCCCccEEEEeccc
Q 029065 117 K-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~ 132 (199)
. ..-++.|++|.+.-+
T Consensus 72 ~~~~~~~~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 72 IGTVDSVVRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 1 112478999887544
No 435
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=87.25 E-value=1.4 Score=34.27 Aligned_cols=83 Identities=22% Similarity=0.314 Sum_probs=51.0
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=-|++.|+ ++..++..|++|+++|.+ +.++.+...+..... ...+.....|..+...
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~~~D~~~~~~ 75 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-----------DAILQPVVADLGTEQG 75 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-----------TCEEEEEECCTTSHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----------CceEEEEecCCCCHHH
Confidence 3578999999987664 455566679999999974 344444444433211 1246667777765432
Q ss_pred cc---ccCCCccEEEEecccc
Q 029065 116 IK---AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~---~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|+++.+.-+.
T Consensus 76 ~~~~~~~~g~id~lv~nAg~~ 96 (267)
T 3t4x_A 76 CQDVIEKYPKVDILINNLGIF 96 (267)
T ss_dssp HHHHHHHCCCCSEEEECCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCC
Confidence 11 1135789998876543
No 436
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=87.24 E-value=0.72 Score=36.10 Aligned_cols=78 Identities=19% Similarity=0.314 Sum_probs=53.6
Q ss_pred cCCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeC
Q 029065 36 FCPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG 111 (199)
Q Consensus 36 ~~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 111 (199)
|.+..|+||++|=-|++.|+ ++..++..|++|+.+|.+. .++. ....++....+|..
T Consensus 4 f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------------------~~~~~~~~~~~Dv~ 64 (242)
T 4b79_A 4 FQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------------------PRHPRIRREELDIT 64 (242)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------------------CCCTTEEEEECCTT
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------------------hhcCCeEEEEecCC
Confidence 56778999999999998875 6677778899999999732 2211 01236777778876
Q ss_pred CCcccc---ccCCCccEEEEeccc
Q 029065 112 NEDHIK---AVAPPFDYIIGTDVV 132 (199)
Q Consensus 112 ~~~~~~---~~~~~fD~Ii~~~~~ 132 (199)
+.+... ..-++.|+++-+.-+
T Consensus 65 ~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 65 DSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp CHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CHHHHHHHHHhcCCCCEEEECCCC
Confidence 654221 123679999877544
No 437
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.23 E-value=0.89 Score=35.96 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=50.7
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
...++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+... ...+.+..+|..+.
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-------------GGQAIALEADVSDE 89 (283)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-------------TCCEEEEECCTTCH
T ss_pred hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCH
Confidence 345678999999987764 455566779999999974 3444444433222 23677888888765
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ..-++.|++|.+.-+
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 90 LQMRNAVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 4221 112479999887554
No 438
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=87.18 E-value=1.8 Score=33.34 Aligned_cols=80 Identities=16% Similarity=0.050 Sum_probs=47.9
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ +...++..|++|++++.+ +.++.+...+...+ .++.+...|..+.+.
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 77 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------------FQVTGSVCDASLRPE 77 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeeEEEECCCCCHHH
Confidence 3578899988876553 344445569999999873 34444433333221 256777778765432
Q ss_pred cccc--------CCCccEEEEeccc
Q 029065 116 IKAV--------APPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~~--------~~~fD~Ii~~~~~ 132 (199)
.... .++.|++|.+.-+
T Consensus 78 ~~~~~~~~~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 78 REKLMQTVSSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHHHHHhCCCCcEEEECCCC
Confidence 2110 1578999877544
No 439
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=87.17 E-value=0.49 Score=37.47 Aligned_cols=81 Identities=25% Similarity=0.264 Sum_probs=51.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+... ..++.+..+|..+...
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~ 71 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-------------GGEAAALAGDVGDEAL 71 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-------------TCCEEECCCCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence 4678999999987764 555666779999999974 3444444433222 2356777778765532
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|++|.+.-+.
T Consensus 72 v~~~~~~~~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 72 HEALVELAVRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 21 1124799998876543
No 440
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.14 E-value=1.2 Score=35.78 Aligned_cols=82 Identities=23% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-------------hHHHHHHHHHHHhhhccccCCCCCCCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-------------EVLPLLKRNVEWNTSRISQMNPGSDLLGS 102 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-------------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 102 (199)
..+++++||=-|++.|+ ++..++..|++|+++|.+ +.++.+...+... ..+
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 108 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-------------GRR 108 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-------------CCe
Confidence 45688999999987764 556666779999998753 2333333333222 236
Q ss_pred EEEEEeeeCCCcccc-------ccCCCccEEEEecccc
Q 029065 103 IQAVELDWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 103 i~~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+.+..+|+.+..... ..-++.|++|.+.-+.
T Consensus 109 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 788888887654221 1124799998875543
No 441
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=86.94 E-value=0.61 Score=38.81 Aligned_cols=97 Identities=27% Similarity=0.261 Sum_probs=57.8
Q ss_pred CCCCcEEEeCCCc-ChHHHHHHh-hCC-eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-
Q 029065 41 LKGKRVIELGAGC-GVAGFGMAL-LGC-NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la~-~g~-~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~- 115 (199)
-+|.+||-+|||. |..++.+|+ .|+ +|+++|.+ +-++.+++ .+. + .+|....+.
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa---------------~--~i~~~~~~~~ 242 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF---------------E--TIDLRNSAPL 242 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC---------------E--EEETTSSSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC---------------c--EEcCCCcchH
Confidence 3678999999986 888888886 588 79999974 35555432 221 2 133322211
Q ss_pred ---c-ccc-CCCccEEEEeccccC--------CcChHHHHHHHHHhcCCCcEEEEE
Q 029065 116 ---I-KAV-APPFDYIIGTDVVYA--------EHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 116 ---~-~~~-~~~fD~Ii~~~~~~~--------~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. ... ...+|+|+-.-.-.. .......+....+.|+++|++.+.
T Consensus 243 ~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 243 RDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred HHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 0 011 236999986432110 001234678888899999987654
No 442
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.89 E-value=1.8 Score=33.45 Aligned_cols=83 Identities=14% Similarity=0.180 Sum_probs=52.9
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.+++++|=-|++.|+ ++..++..|++|++++.+ +.++.+...+..... ....+.+..+|..+.+..
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v 74 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK----------HVQEPIVLPLDITDCTKA 74 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT----------TSCCCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc----------ccCcceEEeccCCCHHHH
Confidence 568899999987764 555666779999999974 455555554433310 023667788888765422
Q ss_pred c-------ccCCCccEEEEecccc
Q 029065 117 K-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~~ 133 (199)
. ..-++.|++|.+.-+.
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 75 DTEIKDIHQKYGAVDILVNAAAMF 98 (250)
T ss_dssp HHHHHHHHHHHCCEEEEEECCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCcC
Confidence 1 1125799998876553
No 443
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.84 E-value=0.16 Score=41.01 Aligned_cols=91 Identities=11% Similarity=0.076 Sum_probs=53.8
Q ss_pred CCCCcEEEeCC--CcChHHHHHH-hhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGA--GCGVAGFGMA-LLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGc--G~G~~sl~la-~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
-++++||-.|+ |.|...+.++ ..|++|+++|.+ +-++.+++ .+. .. ..|..+.+..
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~-------------~~---~~~~~~~~~~ 198 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGA-------------WQ---VINYREEDLV 198 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC-------------SE---EEETTTSCHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC-------------CE---EEECCCccHH
Confidence 35789999994 3466555555 459999999974 35555543 221 11 1233222110
Q ss_pred ----c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 ----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ----~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. .....+|+++-+-. ...++...+.++++|.+++.
T Consensus 199 ~~~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 199 ERLKEITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHHHHHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEE
Confidence 0 11236999886532 34567778888999987654
No 444
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=86.65 E-value=1.7 Score=33.64 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=48.9
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
+++++||=.|++.|+ +...++..|++|+++|.+ +.++.+...+.... ..++.+..+|+.+.+..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~D~~~~~~~ 72 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF------------GVRVLEVAVDVATPEGV 72 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc------------CCceEEEEcCCCCHHHH
Confidence 568899988887653 445555679999999873 34444433332220 12567777888765422
Q ss_pred cc-------cCCCccEEEEecccc
Q 029065 117 KA-------VAPPFDYIIGTDVVY 133 (199)
Q Consensus 117 ~~-------~~~~fD~Ii~~~~~~ 133 (199)
.. .-++.|++|.+.-+.
T Consensus 73 ~~~~~~~~~~~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 73 DAVVESVRSSFGGADILVNNAGTG 96 (263)
T ss_dssp HHHHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 10 114789998776543
No 445
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=86.52 E-value=1.2 Score=34.01 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=49.2
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
+...++++||=.|++.|+ ++..++..|++|++++.+ +.++.+...+ ...+.+...|..+.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~ 72 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----------------KDNYTIEVCNLANK 72 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CSSEEEEECCTTSH
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------------ccCccEEEcCCCCH
Confidence 456789999999987664 445556679999999974 3444333222 12567777777654
Q ss_pred cccc---ccCCCccEEEEeccc
Q 029065 114 DHIK---AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~---~~~~~fD~Ii~~~~~ 132 (199)
.... ..-++.|+++.+.-+
T Consensus 73 ~~~~~~~~~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 73 EECSNLISKTSNLDILVCNAGI 94 (249)
T ss_dssp HHHHHHHHTCSCCSEEEECCC-
T ss_pred HHHHHHHHhcCCCCEEEECCCC
Confidence 3211 112478999877554
No 446
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=86.48 E-value=1.4 Score=34.52 Aligned_cols=83 Identities=18% Similarity=0.204 Sum_probs=52.4
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=-|++.|+ ++..++..|++|+++|.+ +.++.+...+...+. ....+.+..+|..+.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~~~Dv~~~~~ 77 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA----------NGGAIRYEPTDITNEDE 77 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC----------SSCEEEEEECCTTSHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC----------CCceEEEEeCCCCCHHH
Confidence 4678999999987664 455566679999999974 355554444433221 12267788888876542
Q ss_pred cc-------ccCCCccEEEEeccc
Q 029065 116 IK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~ 132 (199)
.. ..-++.|+++.+.-+
T Consensus 78 v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 78 TARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 21 112478999877554
No 447
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=86.46 E-value=0.58 Score=38.10 Aligned_cols=89 Identities=20% Similarity=0.294 Sum_probs=52.9
Q ss_pred CCCCcEEEeCC-C-cChHHHHHHh-hCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc-
Q 029065 41 LKGKRVIELGA-G-CGVAGFGMAL-LGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI- 116 (199)
Q Consensus 41 ~~~~~VLdlGc-G-~G~~sl~la~-~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~- 116 (199)
-+|.+||=+|+ | .|...+.+++ .|++|+++..++-++.+++ .+. .. .| ...+..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----lGa---------------~~--i~-~~~~~~~ 206 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRD----LGA---------------TP--ID-ASREPED 206 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH----HTS---------------EE--EE-TTSCHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHH----cCC---------------CE--ec-cCCCHHH
Confidence 35789999994 4 3777777775 4899999832444444432 231 11 22 211110
Q ss_pred ----cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 ----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ----~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
......+|+|+-+-. ...+....+.|+++|.+++.
T Consensus 207 ~~~~~~~~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 207 YAAEHTAGQGFDLVYDTLG-------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHHHHTTSCEEEEEESSC-------THHHHHHHHHEEEEEEEEES
T ss_pred HHHHHhcCCCceEEEECCC-------cHHHHHHHHHHhcCCeEEEE
Confidence 011247999886422 24677778889999987654
No 448
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=86.36 E-value=1.4 Score=34.70 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=52.2
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
..+.++++|=-|++.|+ ++..++..|++|+++|. + +.++.....+.... ...+.+..+|+.+.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~d~ 88 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS------------SGTVLHHPADMTKP 88 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC------------SSCEEEECCCTTCH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc------------CCcEEEEeCCCCCH
Confidence 34678999999987764 55566677999999986 3 34444444333221 23677778888765
Q ss_pred cccc-------ccCCCccEEEEecccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+... ..-++.|++|.+.-+.
T Consensus 89 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 115 (281)
T 3v2h_A 89 SEIADMMAMVADRFGGADILVNNAGVQ 115 (281)
T ss_dssp HHHHHHHHHHHHHTSSCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 4221 1125789998876553
No 449
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=86.26 E-value=1.1 Score=35.50 Aligned_cols=82 Identities=20% Similarity=0.188 Sum_probs=50.9
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
...+++++||=.|++.|+ +...++..|++|+++|.+ +.++.+...+...+ ..+.+..+|+.+.
T Consensus 29 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~ 95 (291)
T 3cxt_A 29 QFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG-------------INAHGYVCDVTDE 95 (291)
T ss_dssp GGCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CCCEEEECCTTCH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEecCCCH
Confidence 345788999999987653 444555679999999974 34444444333322 2466777887765
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ..-++.|++|.+.-+
T Consensus 96 ~~v~~~~~~~~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 96 DGIQAMVAQIESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCc
Confidence 4221 112579999887554
No 450
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=86.23 E-value=1.3 Score=34.02 Aligned_cols=78 Identities=22% Similarity=0.312 Sum_probs=49.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+ + .++.+..+|..+.+.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~~~~~ 66 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---G-------------KKARAIAADISDPGS 66 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-------------TTEEECCCCTTCHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------------CceEEEEcCCCCHHH
Confidence 4678999999987764 555666779999999974 3433333222 1 256677777765542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|++|.+.-+.
T Consensus 67 v~~~~~~~~~~~g~id~lv~nAg~~ 91 (247)
T 3rwb_A 67 VKALFAEIQALTGGIDILVNNASIV 91 (247)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCC
Confidence 21 1124799998876553
No 451
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=86.12 E-value=2 Score=33.77 Aligned_cols=81 Identities=14% Similarity=0.053 Sum_probs=47.9
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ +...++..|++|++++. .+.++.+...+... ..++.+..+|+.+.+.
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~d~~~ 107 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-------------GYESSGYAGDVSKKEE 107 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-------------CCceeEEECCCCCHHH
Confidence 3567899988876553 33444456889988885 33444433333222 2256777788765542
Q ss_pred ccc-------cCCCccEEEEecccc
Q 029065 116 IKA-------VAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~~-------~~~~fD~Ii~~~~~~ 133 (199)
... ..++.|++|.+..+.
T Consensus 108 v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 108 ISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp HHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCC
Confidence 211 125789998875543
No 452
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=86.07 E-value=1.2 Score=35.38 Aligned_cols=83 Identities=17% Similarity=0.212 Sum_probs=52.8
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=-|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ ..++.+..+|+.+.+
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~d~~ 104 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG------------AGNVIGVRLDVSDPG 104 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS------------SSCEEEEECCTTCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC------------CCcEEEEEEeCCCHH
Confidence 34678999999987664 555566779999999973 34444444332221 136788888887654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 105 ~v~~~~~~~~~~~g~iD~lvnnAg~~ 130 (293)
T 3rih_A 105 SCADAARTVVDAFGALDVVCANAGIF 130 (293)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 211 1125789998876553
No 453
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=86.02 E-value=1.3 Score=34.06 Aligned_cols=78 Identities=21% Similarity=0.197 Sum_probs=49.0
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=-|++.|+ ++..++..|++|+++|.+. .++.+...+.. ......+|..+.+.
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------------~~~~~~~Dv~d~~~ 69 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----------------NGKGMALNVTNPES 69 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----------------GEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----------------cceEEEEeCCCHHH
Confidence 4678999999987764 5556667799999999743 44433332211 34666777765542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|+++.+.-+.
T Consensus 70 v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 70 IEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 21 1124799998876543
No 454
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.01 E-value=1.4 Score=35.45 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=51.2
Q ss_pred cEEEeCC-C-cChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccC
Q 029065 45 RVIELGA-G-CGVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVA 120 (199)
Q Consensus 45 ~VLdlGc-G-~G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 120 (199)
+||=+|+ | .|...+.+++ .|++|++++.+ +-++.+++ .+. +.+ +..-+...........
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa------------~~v-~~~~~~~~~~~~~~~~ 215 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGA------------SEV-ISREDVYDGTLKALSK 215 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTC------------SEE-EEHHHHCSSCCCSSCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC------------cEE-EECCCchHHHHHHhhc
Confidence 8999998 4 3777777775 59999999974 45555543 221 111 1110110000001112
Q ss_pred CCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 121 PPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 121 ~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
+.+|+|+-+-. . ..+....+.++++|.+.+.
T Consensus 216 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 216 QQWQGAVDPVG-----G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCEEEEEESCC-----T--HHHHHHHTTEEEEEEEEEC
T ss_pred CCccEEEECCc-----H--HHHHHHHHhhcCCCEEEEE
Confidence 46898875421 1 3577777888999987654
No 455
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.96 E-value=2 Score=33.20 Aligned_cols=78 Identities=21% Similarity=0.268 Sum_probs=49.0
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+ ...+.+..+|..+.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~ 68 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----------------GPAAYAVQMDVTRQDS 68 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCCceEEEeeCCCHHH
Confidence 3578999999987664 455566679999999973 3333332222 1246777788876542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|+++.+.-+.
T Consensus 69 v~~~~~~~~~~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 69 IDAAIAATVEHAGGLDILVNNAALF 93 (259)
T ss_dssp HHHHHHHHHHHSSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcC
Confidence 21 1124799998876543
No 456
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=85.92 E-value=2.6 Score=32.03 Aligned_cols=78 Identities=22% Similarity=0.234 Sum_probs=46.3
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
+++++||=.|++.|+ +...++..|++|++++.+ +.++.....+.. ...+.+..+|..+.+..
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~ 69 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------------PDQIQFFQHDSSDEDGW 69 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--------------cCceEEEECCCCCHHHH
Confidence 568889988876553 344455569999999873 333333222211 13577888888655322
Q ss_pred c-------ccCCCccEEEEeccc
Q 029065 117 K-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~ 132 (199)
. ...+++|++|.+..+
T Consensus 70 ~~~~~~~~~~~~~id~li~~Ag~ 92 (251)
T 1zk4_A 70 TKLFDATEKAFGPVSTLVNNAGI 92 (251)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 1 011468999877544
No 457
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=85.90 E-value=1.5 Score=33.53 Aligned_cols=79 Identities=24% Similarity=0.280 Sum_probs=47.7
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
+++++||=.|++.|+ +...++..|++|++++. +. .++.+...+...+ .++.+..+|+.+.+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 68 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-------------SDAIAVRADVANAED 68 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHH
Confidence 457888888876553 44555567999999886 43 4444433333221 256777788776542
Q ss_pred ccc-------cCCCccEEEEeccc
Q 029065 116 IKA-------VAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~-------~~~~fD~Ii~~~~~ 132 (199)
... .-++.|++|.+.-+
T Consensus 69 ~~~~~~~~~~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 69 VTNMVKQTVDVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 210 11478999877554
No 458
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=85.86 E-value=1.2 Score=35.85 Aligned_cols=82 Identities=18% Similarity=0.227 Sum_probs=51.6
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-----------hHHHHHHHHHHHhhhccccCCCCCCCCCcEE
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-----------EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQ 104 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-----------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~ 104 (199)
..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+ .++.
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 89 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-------------GEAV 89 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-------------CEEE
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC-------------CcEE
Confidence 45688999999987664 455566779999999853 24444444443332 3567
Q ss_pred EEEeeeCCCcccc-------ccCCCccEEEEecccc
Q 029065 105 AVELDWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 105 ~~~~d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
+..+|..+.+... ..-++.|++|.+.-+.
T Consensus 90 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 125 (322)
T 3qlj_A 90 ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV 125 (322)
T ss_dssp EECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred EEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 7777876553221 1124789998776553
No 459
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=85.70 E-value=1.2 Score=35.87 Aligned_cols=87 Identities=14% Similarity=0.105 Sum_probs=50.3
Q ss_pred cEEEeCC-C-cChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC--cc-cc
Q 029065 45 RVIELGA-G-CGVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE--DH-IK 117 (199)
Q Consensus 45 ~VLdlGc-G-~G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~-~~ 117 (199)
+||=+|+ | .|...+.+++ .|++|++++.+ +-++.+++ .+.. .+ +|..+. .. ..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~------------~~----i~~~~~~~~~~~~ 211 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK------------EV----LAREDVMAERIRP 211 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS------------EE----EECC---------
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc------------EE----EecCCcHHHHHHH
Confidence 7999997 4 4777777775 58899999974 45555543 2211 11 111111 00 01
Q ss_pred ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 118 AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 118 ~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
...+.+|+|+-+-. . ..+....+.++++|.+.+.
T Consensus 212 ~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 212 LDKQRWAAAVDPVG-----G--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CCSCCEEEEEECST-----T--TTHHHHHHTEEEEEEEEEC
T ss_pred hcCCcccEEEECCc-----H--HHHHHHHHhhccCCEEEEE
Confidence 11246998875421 1 2466777888999987664
No 460
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=85.65 E-value=0.23 Score=40.79 Aligned_cols=91 Identities=21% Similarity=0.243 Sum_probs=52.7
Q ss_pred CCCCcEEEeCC-C-cChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGA-G-CGVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGc-G-~G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
-+|++||-.|+ | .|...+.+++ .|++|+++|.+ +-++.+++ .+. . . .+|..+.+..
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga-------------~-~--~~d~~~~~~~ 228 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGA-------------H-E--VFNHREVNYI 228 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC-------------S-E--EEETTSTTHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCC-------------C-E--EEeCCCchHH
Confidence 35789999997 3 4666655554 58999999974 34444322 221 1 1 1233222110
Q ss_pred ----c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 ----K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ----~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
. .....+|+++-+-. ...+....+.++++|.+++.
T Consensus 229 ~~~~~~~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 229 DKIKKYVGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HHHHHHHCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHcCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEE
Confidence 0 11237999986532 13466677888999887654
No 461
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=85.54 E-value=2.1 Score=33.85 Aligned_cols=62 Identities=16% Similarity=0.061 Sum_probs=39.4
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEee-ch-hHHHHHHHHHH-HhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTD-QI-EVLPLLKRNVE-WNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D-~~-~~l~~a~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
.++++++|=.|++.|+ ++..++..|++|++++ .+ +.++.+...+. .. ..++.+..+|+.+.
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-------------PNSAITVQADLSNV 72 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-------------TTCEEEEECCCSSS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-------------CCeeEEEEeecCCc
Confidence 3568899988887664 4455556799999999 64 34444444443 22 12567778888765
Q ss_pred c
Q 029065 114 D 114 (199)
Q Consensus 114 ~ 114 (199)
.
T Consensus 73 ~ 73 (291)
T 1e7w_A 73 A 73 (291)
T ss_dssp C
T ss_pred c
Confidence 4
No 462
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.43 E-value=1.5 Score=34.34 Aligned_cols=82 Identities=21% Similarity=0.179 Sum_probs=49.4
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+...+. ...++.+..+|+.+.+..
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v 73 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV----------SEKQVNSVVADVTTEDGQ 73 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC----------CGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC----------CCcceEEEEecCCCHHHH
Confidence 568889988887653 445555679999999973 344444433332210 011567788888765422
Q ss_pred c-------ccCCCccEEEEeccc
Q 029065 117 K-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~ 132 (199)
. ..-++.|++|.+.-+
T Consensus 74 ~~~~~~~~~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 74 DQIINSTLKQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 1 012478999887544
No 463
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=85.34 E-value=3.4 Score=31.69 Aligned_cols=78 Identities=17% Similarity=0.165 Sum_probs=45.2
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIK 117 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~ 117 (199)
+++++||=.|++.|+ +...++..|++|+++|.+.. +.....+... ..++.+..+|+.+.+...
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~-------------~~~~~~~~~D~~~~~~v~ 67 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARH-------------GVKAVHHPADLSDVAQIE 67 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTT-------------SCCEEEECCCTTSHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhc-------------CCceEEEeCCCCCHHHHH
Confidence 467889988876553 44455567999999986322 2222222211 125667777776553221
Q ss_pred c-------cCCCccEEEEeccc
Q 029065 118 A-------VAPPFDYIIGTDVV 132 (199)
Q Consensus 118 ~-------~~~~fD~Ii~~~~~ 132 (199)
. .-++.|+++.+.-+
T Consensus 68 ~~~~~~~~~~g~id~lv~~Ag~ 89 (255)
T 2q2v_A 68 ALFALAEREFGGVDILVNNAGI 89 (255)
T ss_dssp HHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 1 01478999877544
No 464
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=85.30 E-value=1.7 Score=33.23 Aligned_cols=80 Identities=23% Similarity=0.194 Sum_probs=47.8
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec--hhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ--IEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~--~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
+++++||=.|++.|+ ++..++..|++|+.++. .+.++.....+...+ ..+.+...|..+...
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 71 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-------------GSAFSIGANLESLHG 71 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT-------------CEEEEEECCTTSHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC-------------CceEEEecCcCCHHH
Confidence 578899999987764 45555667999888753 334444444343332 256677777765432
Q ss_pred ccc-------------cCCCccEEEEecccc
Q 029065 116 IKA-------------VAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~~-------------~~~~fD~Ii~~~~~~ 133 (199)
... ..++.|++|.+.-+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~ 102 (255)
T 3icc_A 72 VEALYSSLDNELQNRTGSTKFDILINNAGIG 102 (255)
T ss_dssp HHHHHHHHHHHHHHHHSSSCEEEEEECCCCC
T ss_pred HHHHHHHHHHHhcccccCCcccEEEECCCCC
Confidence 110 013589998876543
No 465
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=84.87 E-value=3 Score=31.95 Aligned_cols=87 Identities=18% Similarity=0.144 Sum_probs=47.6
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCe-EEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC-cc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCN-VITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-DH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~-v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~ 115 (199)
+++++||=.|++.|+ +...++..|++ |++++.+...+.+. .+.... ....+.+..+|..+. +.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~-~l~~~~-----------~~~~~~~~~~D~~~~~~~ 70 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA-ELKAIN-----------PKVNITFHTYDVTVPVAE 70 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH-HHHHHC-----------TTSEEEEEECCTTSCHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHH-HHHHhC-----------CCceEEEEEEecCCChHH
Confidence 468899999875443 33444456986 88888632111111 111110 012567778888765 32
Q ss_pred cc-------ccCCCccEEEEeccccCCcChH
Q 029065 116 IK-------AVAPPFDYIIGTDVVYAEHLLE 139 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~~~~~~~ 139 (199)
.. ..-++.|++|.+.-+.....+.
T Consensus 71 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~ 101 (254)
T 1sby_A 71 SKKLLKKIFDQLKTVDILINGAGILDDHQIE 101 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCTTCHH
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCHHHHh
Confidence 11 0114789999876654444433
No 466
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=84.85 E-value=1.8 Score=34.09 Aligned_cols=83 Identities=20% Similarity=0.321 Sum_probs=50.7
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
+..+++++||=.|++.|+ +...++..|++|+++|.+ +.++.+...+.... ..++.+..+|+.+.
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~ 88 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT------------GNKVHAIQCDVRDP 88 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTTCH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCceEEEEeCCCCH
Confidence 445788999999986553 444455669999999973 34444333332221 12577888888765
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ...+++|++|.+..+
T Consensus 89 ~~~~~~~~~~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 89 DMVQNTVSELIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHHHHHHHHHHHTCSCSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3221 113478999877554
No 467
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.82 E-value=0.69 Score=37.65 Aligned_cols=43 Identities=12% Similarity=0.014 Sum_probs=32.5
Q ss_pred CCCccEEEEeccccCC-------c----ChHHHHHHHHHhcCCCcEEEEEEEec
Q 029065 120 APPFDYIIGTDVVYAE-------H----LLEPLLQTIFALSGPKTTILLGYEIR 162 (199)
Q Consensus 120 ~~~fD~Ii~~~~~~~~-------~----~~~~~l~~l~~~l~~~g~i~i~~~~~ 162 (199)
.++||+|++.+|+... . ....++..+.++|+|+|.+++....+
T Consensus 56 ~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 4689999999886532 1 34566777889999999998876543
No 468
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.74 E-value=0.95 Score=37.44 Aligned_cols=40 Identities=25% Similarity=0.258 Sum_probs=26.3
Q ss_pred CCCCCcEEEeCCCc-ChHH-HHHHhhCCeEEEeech-hHHHHH
Q 029065 40 KLKGKRVIELGAGC-GVAG-FGMALLGCNVITTDQI-EVLPLL 79 (199)
Q Consensus 40 ~~~~~~VLdlGcG~-G~~s-l~la~~g~~v~~~D~~-~~l~~a 79 (199)
.+++++|+=+|+|. |... ..+...|++|+++|.+ +.++.+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~ 205 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYL 205 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 46789999999953 4322 2233459999999974 344444
No 469
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.69 E-value=1.4 Score=35.90 Aligned_cols=43 Identities=21% Similarity=0.127 Sum_probs=32.8
Q ss_pred CCcEEEeCCCc-Ch-HHHHHHhhCCeEEEeec-hhHHHHHHHHHHH
Q 029065 43 GKRVIELGAGC-GV-AGFGMALLGCNVITTDQ-IEVLPLLKRNVEW 85 (199)
Q Consensus 43 ~~~VLdlGcG~-G~-~sl~la~~g~~v~~~D~-~~~l~~a~~~~~~ 85 (199)
-.+|.=||+|+ |. ++..+|..|.+|+..|. ++.++.+..++..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~ 51 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHH
Confidence 35788999997 53 67788888999999998 4477777666643
No 470
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=84.58 E-value=1.2 Score=34.03 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=47.1
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-h-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-E-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
+++++||=.|++.|+ +...++..|++|++++.+ . .++.+...+...+ .++.+..+|+.+.+.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 71 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-------------GDAAFFAADLATSEA 71 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-------------CEEEEEECCTTSHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence 467889977775443 334444569999999864 3 4444444333322 257778888876542
Q ss_pred cccc-------CCCccEEEEeccc
Q 029065 116 IKAV-------APPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~~-------~~~fD~Ii~~~~~ 132 (199)
.... -++.|++|.+..+
T Consensus 72 ~~~~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 72 CQQLVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 2111 1378999877554
No 471
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=84.55 E-value=1.7 Score=38.96 Aligned_cols=59 Identities=15% Similarity=0.167 Sum_probs=34.9
Q ss_pred CCCccEEEEeccc--cCCcC-hHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHH-HhCCeEEEec
Q 029065 120 APPFDYIIGTDVV--YAEHL-LEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMW-KSNFNVKLVP 184 (199)
Q Consensus 120 ~~~fD~Ii~~~~~--~~~~~-~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 184 (199)
...+|.++..+.- .++++ -..++..+.+++++|+.+. ++.. .. ...+.+ ..+|.+..+.
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~-t~~~-~~----~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS-TFTA-AG----FVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE-ESCC-CH----HHHHHHHHTTCEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE-eccC-cH----HHHHHHHhCCeEEEecc
Confidence 3679999885411 12233 3678899999999988743 2222 12 122222 4688887765
No 472
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=84.49 E-value=11 Score=29.56 Aligned_cols=82 Identities=17% Similarity=0.105 Sum_probs=46.6
Q ss_pred CCCCCCCcEEEeCCCcChHHHHHH----hhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEE-EeeeC
Q 029065 38 PSKLKGKRVIELGAGCGVAGFGMA----LLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAV-ELDWG 111 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~~sl~la----~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~ 111 (199)
+...++++||=.|+. |.+|..++ ..|.+|++++.+ ...+.....+.... ...+.+. ..|+.
T Consensus 6 ~~~~~~~~vlVTGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~ 72 (342)
T 1y1p_A 6 AVLPEGSLVLVTGAN-GFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY------------PGRFETAVVEDML 72 (342)
T ss_dssp CSSCTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS------------TTTEEEEECSCTT
T ss_pred ccCCCCCEEEEECCc-cHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC------------CCceEEEEecCCc
Confidence 344578899988763 44454444 458999999863 33333322221110 1256666 67876
Q ss_pred CCccccccCCCccEEEEeccc
Q 029065 112 NEDHIKAVAPPFDYIIGTDVV 132 (199)
Q Consensus 112 ~~~~~~~~~~~fD~Ii~~~~~ 132 (199)
+.......-..+|+|+-+...
T Consensus 73 d~~~~~~~~~~~d~vih~A~~ 93 (342)
T 1y1p_A 73 KQGAYDEVIKGAAGVAHIASV 93 (342)
T ss_dssp STTTTTTTTTTCSEEEECCCC
T ss_pred ChHHHHHHHcCCCEEEEeCCC
Confidence 654433223478999876544
No 473
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=84.36 E-value=2.1 Score=33.78 Aligned_cols=88 Identities=17% Similarity=0.267 Sum_probs=51.8
Q ss_pred CCCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 37 CPSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 37 ~~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
.+..+++++||=.|++.|+ +...++..|++|++++.+ +.++.+...+...... ....++.+..+|+.+
T Consensus 12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~D~~~ 83 (303)
T 1yxm_A 12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP--------TKQARVIPIQCNIRN 83 (303)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT--------TCCCCEEEEECCTTC
T ss_pred CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc--------cCCccEEEEecCCCC
Confidence 4556788999999976553 344445569999999873 3444444444321000 002367888888876
Q ss_pred Cccccc-------cCCCccEEEEeccc
Q 029065 113 EDHIKA-------VAPPFDYIIGTDVV 132 (199)
Q Consensus 113 ~~~~~~-------~~~~fD~Ii~~~~~ 132 (199)
...... .-++.|++|.+.-+
T Consensus 84 ~~~v~~~~~~~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 84 EEEVNNLVKSTLDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 542211 11468999877543
No 474
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=84.36 E-value=2.7 Score=32.39 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=47.4
Q ss_pred CCcEEEeCCCcCh---HHHHHHhhCCeEEEeechh-H--HHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 43 GKRVIELGAGCGV---AGFGMALLGCNVITTDQIE-V--LPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 43 ~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~-~--l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
++++|=.|++.|+ +...++..|++|+++|.+. . ++.+...+... ..++.+..+|+.+.+..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v 68 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-------------DQKAVFVGLDVTDKANF 68 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence 5778888887653 4455566799999998743 3 44433333222 23577778888765422
Q ss_pred cc-------cCCCccEEEEecccc
Q 029065 117 KA-------VAPPFDYIIGTDVVY 133 (199)
Q Consensus 117 ~~-------~~~~fD~Ii~~~~~~ 133 (199)
.. .-++.|++|.+.-+.
T Consensus 69 ~~~~~~~~~~~g~iD~lv~nAg~~ 92 (258)
T 3a28_C 69 DSAIDEAAEKLGGFDVLVNNAGIA 92 (258)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCC
Confidence 10 124789998875543
No 475
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=84.29 E-value=2.5 Score=32.73 Aligned_cols=80 Identities=15% Similarity=0.099 Sum_probs=48.2
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
..+++||=.|++.|+ ++..++..|++|+.++. + +..+.+...+... ..++.+..+|+.+.+.
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~ 90 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-------------GGNGRLLSFDVANREQ 90 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-------------CCceEEEEecCCCHHH
Confidence 567899999987664 45555667999866653 3 3344443333333 2367888888876542
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ...++.|++|.+.-+.
T Consensus 91 ~~~~~~~~~~~~g~id~li~nAg~~ 115 (267)
T 4iiu_A 91 CREVLEHEIAQHGAWYGVVSNAGIA 115 (267)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCccEEEECCCCC
Confidence 21 1124789998775543
No 476
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=84.20 E-value=3.1 Score=32.87 Aligned_cols=79 Identities=10% Similarity=0.132 Sum_probs=44.6
Q ss_pred CCCCCcEEEeCCCcC---hHHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCG---VAGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G---~~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=+|+..| .+...++..|++|+.++.+ +-.+...+.+.... .+.+...|+.+.+.
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--------------~~~~~~~D~~~~~~ 181 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--------------KVNVTAAETADDAS 181 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--------------TCCCEEEECCSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--------------CcEEEEecCCCHHH
Confidence 367899999995433 2455566779999999873 33332322222211 22344566654432
Q ss_pred ccccCCCccEEEEeccc
Q 029065 116 IKAVAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~~~~~fD~Ii~~~~~ 132 (199)
....-..+|+||.+...
T Consensus 182 ~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 182 RAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp HHHHTTTCSEEEECCCT
T ss_pred HHHHHHhCCEEEECCCc
Confidence 22223458999887653
No 477
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=84.11 E-value=2.4 Score=32.08 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=47.2
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
+++++||=.|++.|+ +...++..|++|++++.+ +.++.....+.... ...+.+..+|+.+.+..
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~ 72 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY------------GVKAHGVEMNLLSEESI 72 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH------------CCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc------------CCceEEEEccCCCHHHH
Confidence 567889988876543 334444569999999873 34444433332211 12567777787655322
Q ss_pred c-------ccCCCccEEEEeccc
Q 029065 117 K-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~ 132 (199)
. ...++.|+++.+..+
T Consensus 73 ~~~~~~~~~~~~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 73 NKAFEEIYNLVDGIDILVNNAGI 95 (248)
T ss_dssp HHHHHHHHHHSSCCSEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 1 112478999877544
No 478
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=84.07 E-value=3.8 Score=31.78 Aligned_cols=81 Identities=15% Similarity=0.068 Sum_probs=49.2
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.+++++||=.|++.|+ +...++..|++|+++|.+ +.++.+...+...+ .++.+..+|+.+.+.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~ 97 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG-------------VHSKAYKCNISDPKS 97 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC-------------SCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcceEEEeecCCHHH
Confidence 3678999999987664 445555679999999863 33333333332221 256777788765532
Q ss_pred ccc-------cCCCccEEEEecccc
Q 029065 116 IKA-------VAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~~-------~~~~fD~Ii~~~~~~ 133 (199)
... .-+++|++|.+..+.
T Consensus 98 ~~~~~~~~~~~~g~id~li~~Ag~~ 122 (279)
T 3ctm_A 98 VEETISQQEKDFGTIDVFVANAGVT 122 (279)
T ss_dssp HHHHHHHHHHHHSCCSEEEECGGGS
T ss_pred HHHHHHHHHHHhCCCCEEEECCccc
Confidence 210 114689998875543
No 479
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=84.04 E-value=2.8 Score=34.82 Aligned_cols=108 Identities=13% Similarity=0.132 Sum_probs=65.0
Q ss_pred CCCcEEEeCCCcChHHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccccccCC
Q 029065 42 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP 121 (199)
Q Consensus 42 ~~~~VLdlGcG~G~~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 121 (199)
.+.+||.++-+.|.+++.++. +.+|+.+..+..-..+ ++.|+.. . .. ...| .....
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~-~~~~~~~~~~~~~~~~---l~~~~~~------------~-~~-~~~~------~~~~~ 100 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEG-RMAVERLETSRAAFRC---LTASGLQ------------A-RL-ALPW------EAAAG 100 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBT-TBEEEEEECBHHHHHH---HHHTTCC------------C-EE-CCGG------GSCTT
T ss_pred hCCcEEEecCCCCccccccCC-CCceEEEeCcHHHHHH---HHHcCCC------------c-cc-cCCc------cCCcC
Confidence 346899999999987777643 3667666433211111 5666642 1 11 1111 12356
Q ss_pred CccEEEEeccccC-CcChHHHHHHHHHhcCCCcEEEEEEEecChhHHHHHHHHHH
Q 029065 122 PFDYIIGTDVVYA-EHLLEPLLQTIFALSGPKTTILLGYEIRSTSVHEQMLQMWK 175 (199)
Q Consensus 122 ~fD~Ii~~~~~~~-~~~~~~~l~~l~~~l~~~g~i~i~~~~~~~~~~~~~~~~~~ 175 (199)
.||+|+.--+-.- .......+..+...|++||.++++...+.. .+++.+.+.
T Consensus 101 ~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g--~~~~~~~~~ 153 (381)
T 3dmg_A 101 AYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNKG--FERYFKEAR 153 (381)
T ss_dssp CEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGGT--HHHHHHHHH
T ss_pred CCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHHH--HHHHHHHHH
Confidence 8999887533211 123567788888889999999999887654 355555543
No 480
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=83.96 E-value=2.1 Score=32.91 Aligned_cols=79 Identities=20% Similarity=0.217 Sum_probs=50.4
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+...+ ...+.+..+|+.+.+
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~ 68 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----------------GDAALAVAADISKEA 68 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTSHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------------CCceEEEEecCCCHH
Confidence 34678999999998764 556666779999999974 3444333321 125677788886654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ...++.|++|.+.-+.
T Consensus 69 ~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 69 DVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 221 1124789998875543
No 481
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=83.86 E-value=2.7 Score=32.51 Aligned_cols=80 Identities=23% Similarity=0.214 Sum_probs=44.2
Q ss_pred CCCCcEEEeCCC--cCh---HHHHHHhhCCeEEEeechhHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAG--CGV---AGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG--~G~---~sl~la~~g~~v~~~D~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
+++++||=.|++ .|+ ++..++..|++|+++|.+...+...+.+.... ....+..+|+.+.+.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~ 73 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL-------------GSDIVLQCDVAEDAS 73 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT-------------TCCCEEECCTTCHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc-------------CCcEEEEccCCCHHH
Confidence 568899999986 443 44445566999999986431111112221111 122556677765532
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|++|.+.-+.
T Consensus 74 v~~~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 74 IDTMFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11 1124789998876543
No 482
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=83.84 E-value=2.7 Score=33.96 Aligned_cols=61 Identities=16% Similarity=0.064 Sum_probs=39.2
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEee-ch-hHHHHHHHHHH-HhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTD-QI-EVLPLLKRNVE-WNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D-~~-~~l~~a~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
+++++||=.|++.|+ ++..++..|++|++++ .+ +.++.+...+. .. ..++.+..+|+.+..
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-------------PNSAITVQADLSNVA 110 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-------------TTCEEEEECCCSSSC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-------------CCeEEEEEeeCCCch
Confidence 678899988887654 4455556799999999 64 34444444433 21 125777788887654
No 483
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=83.76 E-value=1.5 Score=34.43 Aligned_cols=79 Identities=22% Similarity=0.218 Sum_probs=47.1
Q ss_pred CCCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC
Q 029065 38 PSKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE 113 (199)
Q Consensus 38 ~~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 113 (199)
.....++++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+ + .++.+..+|+.+.
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~d~ 86 (272)
T 4dyv_A 23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---G-------------DDALCVPTDVTDP 86 (272)
T ss_dssp -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T-------------SCCEEEECCTTSH
T ss_pred hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C-------------CCeEEEEecCCCH
Confidence 345678899988887664 455566779999999973 3444333322 1 2567777888765
Q ss_pred cccc-------ccCCCccEEEEeccc
Q 029065 114 DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 ~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
+... ..-++.|++|.+.-+
T Consensus 87 ~~v~~~~~~~~~~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 87 DSVRALFTATVEKFGRVDVLFNNAGT 112 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 4221 112479999887554
No 484
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=83.67 E-value=1.6 Score=33.77 Aligned_cols=80 Identities=19% Similarity=0.268 Sum_probs=47.2
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=.|++.|+ +...++..|++|+++|.+. ..+.....+ .. ...+.+..+|..+..
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~------------~~~~~~~~~D~~~~~ 77 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI--GS------------PDVISFVHCDVTKDE 77 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CC------------TTTEEEEECCTTCHH
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHh--CC------------CCceEEEECCCCCHH
Confidence 34578999988886553 3444556699999998733 333222221 10 125778888887654
Q ss_pred ccccc-------CCCccEEEEeccc
Q 029065 115 HIKAV-------APPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~~~-------~~~fD~Ii~~~~~ 132 (199)
..... .++.|++|.+.-+
T Consensus 78 ~~~~~~~~~~~~~~~id~li~~Ag~ 102 (278)
T 2bgk_A 78 DVRNLVDTTIAKHGKLDIMFGNVGV 102 (278)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcc
Confidence 22111 1478999876543
No 485
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=83.57 E-value=1.7 Score=33.32 Aligned_cols=79 Identities=20% Similarity=0.184 Sum_probs=46.8
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
+++++||=.|+..|+ +...++..|++|++++. +. .++.+...+... ...+.+..+|+.+.+.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~ 71 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-------------GGEAIAVKGDVTVESD 71 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCEEEEEECCTTSHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-------------CCceEEEECCCCCHHH
Confidence 567889988876543 33444556999999986 43 344333333322 1256777788765532
Q ss_pred ccc-------cCCCccEEEEeccc
Q 029065 116 IKA-------VAPPFDYIIGTDVV 132 (199)
Q Consensus 116 ~~~-------~~~~fD~Ii~~~~~ 132 (199)
... ..++.|++|.+.-+
T Consensus 72 ~~~~~~~~~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 72 VINLVQSAIKEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 210 11378999877544
No 486
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.42 E-value=0.31 Score=39.99 Aligned_cols=92 Identities=14% Similarity=0.131 Sum_probs=52.6
Q ss_pred CCCCcEEEeCC--CcChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc-
Q 029065 41 LKGKRVIELGA--GCGVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH- 115 (199)
Q Consensus 41 ~~~~~VLdlGc--G~G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~- 115 (199)
-+|++||-.|+ |.|...+.+++ .|++|+++|.+ +-++.+++ .+. .. .+|..+.+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g~-------------~~---~~~~~~~~~~ 220 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK----LGA-------------AA---GFNYKKEDFS 220 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HTC-------------SE---EEETTTSCHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC-------------cE---EEecCChHHH
Confidence 35789999995 34666655554 58999999974 45555522 121 11 123322211
Q ss_pred --c-c-ccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEEE
Q 029065 116 --I-K-AVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLGY 159 (199)
Q Consensus 116 --~-~-~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~~ 159 (199)
. . .....+|+++-+-.- ..+....+.|+++|.+++..
T Consensus 221 ~~~~~~~~~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 221 EATLKFTKGAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp HHHHHHTTTSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHhcCCCceEEEECCCc-------hHHHHHHHhccCCCEEEEEe
Confidence 0 0 112469998865321 24566678889999876643
No 487
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=83.40 E-value=2.2 Score=32.70 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=48.9
Q ss_pred CCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-h-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 42 KGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-I-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 42 ~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.++++|=-|++.|+ ++..++..|++|+.+|. + +.++.+.+.+...+ .++.+..+|..+.+..
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~v 69 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-------------VDSFAIQANVADADEV 69 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------SCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHH
Confidence 46788888877654 44555667999988875 3 34444444443332 3567778888765422
Q ss_pred c-------ccCCCccEEEEecccc
Q 029065 117 K-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 117 ~-------~~~~~fD~Ii~~~~~~ 133 (199)
. ..-++.|+++.+.-+.
T Consensus 70 ~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 3osu_A 70 KAMIKEVVSQFGSLDVLVNNAGIT 93 (246)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 1124789998876553
No 488
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=83.26 E-value=2.6 Score=32.78 Aligned_cols=80 Identities=13% Similarity=0.085 Sum_probs=47.3
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeec-hh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCC--
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQ-IE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNE-- 113 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~-~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-- 113 (199)
.+++++|=.|++.|+ +...++..|++|+++|. +. .++.+...+.... ..++.+..+|+.+.
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------------~~~~~~~~~Dl~~~~~ 76 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR------------AGSAVLCKGDLSLSSS 76 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS------------TTCEEEEECCCSSSTT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc------------CCceEEEeccCCCccc
Confidence 467889988876653 44455566999999987 54 4444443333220 12567778888766
Q ss_pred --cccc-------ccCCCccEEEEeccc
Q 029065 114 --DHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 114 --~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
.... ..-++.|++|.+.-+
T Consensus 77 ~~~~~~~~~~~~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 77 LLDCCEDIIDCSFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 3221 011478999887554
No 489
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.20 E-value=1.5 Score=36.11 Aligned_cols=41 Identities=37% Similarity=0.440 Sum_probs=28.1
Q ss_pred CCCCcEEEeCCCc-ChHHHHHH-hhCCeEEEeech-hHHHHHHH
Q 029065 41 LKGKRVIELGAGC-GVAGFGMA-LLGCNVITTDQI-EVLPLLKR 81 (199)
Q Consensus 41 ~~~~~VLdlGcG~-G~~sl~la-~~g~~v~~~D~~-~~l~~a~~ 81 (199)
+++++||=+|+|. |.....++ ..|++|+++|.+ +-++.++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~ 208 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLET 208 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 5678999999964 55444444 458999999984 45555443
No 490
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=82.88 E-value=1.5 Score=34.19 Aligned_cols=78 Identities=22% Similarity=0.167 Sum_probs=49.6
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCcc
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDH 115 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 115 (199)
.++++++|=-|++.|+ ++..++..|++|+++|.+. .++.+...+ + ..+.+..+|..+...
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~~~~~ 71 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---G-------------RGAVHHVVDLTNEVS 71 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---C-------------TTCEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C-------------CCeEEEECCCCCHHH
Confidence 4678999999987764 5556667799999999743 444333322 1 145667778765532
Q ss_pred cc-------ccCCCccEEEEecccc
Q 029065 116 IK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 116 ~~-------~~~~~fD~Ii~~~~~~ 133 (199)
.. ..-++.|+++.+.-+.
T Consensus 72 v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 72 VRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 21 1124789998876554
No 491
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=82.88 E-value=2 Score=33.87 Aligned_cols=81 Identities=19% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-h-------HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEe
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-E-------VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVEL 108 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~-------~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 108 (199)
.++++++|=.|++.|+ ++..++..|++|++++.+ + .++.+...+...+ .++.+..+
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 72 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-------------GQALPIVG 72 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-------------SEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-------------CcEEEEEC
Confidence 4678999999988764 555566679999999863 2 2344444343332 35778888
Q ss_pred eeCCCcccc-------ccCCCccEEEEecccc
Q 029065 109 DWGNEDHIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 109 d~~~~~~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
|+.+.+... ..-++.|++|.+.-+.
T Consensus 73 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 73 DIRDGDAVAAAVAKTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp CTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 887654221 1124799998876553
No 492
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=82.87 E-value=1.1 Score=40.83 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=31.0
Q ss_pred CcEEEeCCCcChHHHHHHhhC------Ce-EEEeechh-HHHHHHHH
Q 029065 44 KRVIELGAGCGVAGFGMALLG------CN-VITTDQIE-VLPLLKRN 82 (199)
Q Consensus 44 ~~VLdlGcG~G~~sl~la~~g------~~-v~~~D~~~-~l~~a~~~ 82 (199)
.+|+||.||+|-+++.+...| .+ +.++|.++ +++.-+.|
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHH
Confidence 489999999998888887766 34 78889854 77777766
No 493
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.78 E-value=1.7 Score=33.86 Aligned_cols=82 Identities=16% Similarity=0.126 Sum_probs=48.0
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
+++++||=.|++.|+ +...++..|++|++++.+ +.++.+...+..... ...++.+..+|+.+.+..
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~ 73 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV----------SEQNVNSVVADVTTDAGQ 73 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----------CGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc----------CCCceeEEecccCCHHHH
Confidence 567889988887653 445555679999999873 344444333311110 012567778888755422
Q ss_pred cc-------cCCCccEEEEeccc
Q 029065 117 KA-------VAPPFDYIIGTDVV 132 (199)
Q Consensus 117 ~~-------~~~~fD~Ii~~~~~ 132 (199)
.. .-++.|++|.+.-+
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 74 DEILSTTLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 11 11478999877544
No 494
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.76 E-value=1.2 Score=36.24 Aligned_cols=88 Identities=18% Similarity=0.123 Sum_probs=52.9
Q ss_pred CCCCCcEEEeCCCc-ChHHHHHHh-hCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCccc
Q 029065 40 KLKGKRVIELGAGC-GVAGFGMAL-LGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHI 116 (199)
Q Consensus 40 ~~~~~~VLdlGcG~-G~~sl~la~-~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 116 (199)
.-+|.+||=+|+|. |...+.+|+ .|++|+++|.+ +-++.+++ .+. +.+. .+.+.
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa------------~~v~------~~~~~- 230 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGV------------KHFY------TDPKQ- 230 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTC------------SEEE------SSGGG-
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCC------------Ceec------CCHHH-
Confidence 34688999999975 777777775 48999999974 35555543 231 1111 11111
Q ss_pred cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 117 KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 117 ~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
....+|+|+-.-. .. ..+....+.|+++|.+.+.
T Consensus 231 --~~~~~D~vid~~g--~~----~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 231 --CKEELDFIISTIP--TH----YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp --CCSCEEEEEECCC--SC----CCHHHHHTTEEEEEEEEEC
T ss_pred --HhcCCCEEEECCC--cH----HHHHHHHHHHhcCCEEEEE
Confidence 1227888875321 11 2455666778888876654
No 495
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=82.68 E-value=4.9 Score=31.71 Aligned_cols=82 Identities=20% Similarity=0.274 Sum_probs=51.9
Q ss_pred CCCCCcEEEeCCCcCh---HHHHHHhhCC---eEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCC
Q 029065 40 KLKGKRVIELGAGCGV---AGFGMALLGC---NVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGN 112 (199)
Q Consensus 40 ~~~~~~VLdlGcG~G~---~sl~la~~g~---~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~ 112 (199)
.++++++|=.|++.|+ ++..++..|+ +|++++.+ +.++.+...+..... ..++.+..+|+.+
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~~~Dv~d 98 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP-----------NAKVHVAQLDITQ 98 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT-----------TCEEEEEECCTTC
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC-----------CCeEEEEECCCCC
Confidence 4578999999987764 3444555677 89999873 455555554443210 2357788888876
Q ss_pred Ccccc-------ccCCCccEEEEeccc
Q 029065 113 EDHIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 113 ~~~~~-------~~~~~fD~Ii~~~~~ 132 (199)
.+... ..-++.|++|.+.-+
T Consensus 99 ~~~v~~~~~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 99 AEKIKPFIENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGHHHHHHTSCGGGCSCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 64321 112479999987554
No 496
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=82.63 E-value=2.4 Score=33.03 Aligned_cols=79 Identities=15% Similarity=0.158 Sum_probs=49.9
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
..+++++||=.|++.|+ ++..++..|++|+++|.+ +.++.+... . ...+.+..+|..+..
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~Dv~d~~ 86 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---L-------------GKDVFVFSANLSDRK 86 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---H-------------CSSEEEEECCTTSHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h-------------CCceEEEEeecCCHH
Confidence 45679999999987764 455566679999999873 343333221 1 125677788887654
Q ss_pred ccc-------ccCCCccEEEEecccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVVY 133 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~~ 133 (199)
... ..-++.|++|.+.-+.
T Consensus 87 ~v~~~~~~~~~~~g~iD~lvnnAg~~ 112 (266)
T 3grp_A 87 SIKQLAEVAEREMEGIDILVNNAGIT 112 (266)
T ss_dssp HHHHHHHHHHHHHTSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 221 1124789998776543
No 497
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=82.59 E-value=2.7 Score=34.14 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=24.8
Q ss_pred CCCCCCcEEEeCCCc-C-hHHHHHHhhCC-eEEEeech
Q 029065 39 SKLKGKRVIELGAGC-G-VAGFGMALLGC-NVITTDQI 73 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~-G-~~sl~la~~g~-~v~~~D~~ 73 (199)
..+++++||=+|+|- | .....++..|+ +|+.++.+
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 456899999999972 2 24455667798 68888754
No 498
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=82.58 E-value=4.2 Score=31.76 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=47.1
Q ss_pred CCCCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hHHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 39 SKLKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 39 ~~~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
...+ +++|=.|++.|+ ++..++..|++|+++|.+ +.++.+...+.. ...+.+..+|+.+.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dv~d~~ 82 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--------------KTRVLPLTLDVRDRA 82 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT--------------TSCEEEEECCTTCHH
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--------------CCcEEEEEcCCCCHH
Confidence 3445 789988987664 556666779999999974 344433332211 125677788887654
Q ss_pred ccc-------ccCCCccEEEEeccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~ 132 (199)
... ..-++.|++|.+.-+
T Consensus 83 ~v~~~~~~~~~~~g~iD~lvnnAG~ 107 (272)
T 2nwq_A 83 AMSAAVDNLPEEFATLRGLINNAGL 107 (272)
T ss_dssp HHHHHHHTCCGGGSSCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCC
Confidence 211 112468999887654
No 499
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=82.41 E-value=0.97 Score=36.87 Aligned_cols=91 Identities=18% Similarity=0.285 Sum_probs=53.2
Q ss_pred CC--CcEEEeCCC--cChHHHHHHh-hCC-eEEEeechh-HHHHHHHHHHHhhhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 42 KG--KRVIELGAG--CGVAGFGMAL-LGC-NVITTDQIE-VLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 42 ~~--~~VLdlGcG--~G~~sl~la~-~g~-~v~~~D~~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
+| ++||=.|++ .|...+.+++ .|+ +|+++|.++ -++.+++. .+. . ..+|..+.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~-------------~---~~~d~~~~~ 218 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF-------------D---AAINYKKDN 218 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC-------------S---EEEETTTSC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC-------------c---eEEecCchH
Confidence 57 899999983 3665555554 588 899999743 44444321 121 1 113333221
Q ss_pred cc----cccCCCccEEEEeccccCCcChHHHHHHHHHhcCCCcEEEEE
Q 029065 115 HI----KAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPKTTILLG 158 (199)
Q Consensus 115 ~~----~~~~~~fD~Ii~~~~~~~~~~~~~~l~~l~~~l~~~g~i~i~ 158 (199)
.. ....+.+|+++-+-. ...+....+.++++|.+++.
T Consensus 219 ~~~~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 219 VAEQLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEE
Confidence 10 011236899886532 25677788889999987654
No 500
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=82.30 E-value=2.1 Score=33.10 Aligned_cols=79 Identities=13% Similarity=0.218 Sum_probs=47.9
Q ss_pred CCCCcEEEeCCCcCh---HHHHHHhhCCeEEEeech-hH-HHHHHHHHHHh-hhccccCCCCCCCCCcEEEEEeeeCCCc
Q 029065 41 LKGKRVIELGAGCGV---AGFGMALLGCNVITTDQI-EV-LPLLKRNVEWN-TSRISQMNPGSDLLGSIQAVELDWGNED 114 (199)
Q Consensus 41 ~~~~~VLdlGcG~G~---~sl~la~~g~~v~~~D~~-~~-l~~a~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 114 (199)
+++++||=.|++.|+ ++..++..|++|+++|.+ +. ++.+...+... + ..+.+..+|+.+.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 68 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-------------VKVLYDGADLSKGE 68 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-------------SCEEEECCCTTSHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC-------------CcEEEEECCCCCHH
Confidence 457889988886653 445555679999999873 33 44444433322 2 24667777876553
Q ss_pred ccc-------ccCCCccEEEEeccc
Q 029065 115 HIK-------AVAPPFDYIIGTDVV 132 (199)
Q Consensus 115 ~~~-------~~~~~fD~Ii~~~~~ 132 (199)
... ..-++.|++|.+.-+
T Consensus 69 ~v~~~~~~~~~~~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 69 AVRGLVDNAVRQMGRIDILVNNAGI 93 (260)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC
Confidence 221 011479999887554
Done!