BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029066
(199 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KMJ1|CHAC2_DANRE Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2
PE=2 SV=1
Length = 182
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 8 FALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSK 67
F DHRG P P R TL + E WGVAY + G E+E EYL+ RE
Sbjct: 32 FWQGSTDHRGVPGKPGRVVTLIEDPEGCVWGVAYKLPSGQEQE--VKEYLDYREKGGYGV 89
Query: 68 TLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDY 127
V F+ + E QP ++ S N YLGPAPLE +A+QI +VGP G N DY
Sbjct: 90 ITVTFHPKDEQQQPMQDTLLYIGSC----DNPNYLGPAPLETIAQQIVKSVGPSGKNTDY 145
Query: 128 LFKLEKAMFDIGHE--DDYIIELANEVRK 154
LF+L A+ + E DD++ L V++
Sbjct: 146 LFELADALRQLVPEDLDDHLFSLERLVKQ 174
>sp|Q5PPV4|CHAC2_XENLA Cation transport regulator-like protein 2 OS=Xenopus laevis
GN=chac2 PE=2 SV=1
Length = 184
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 2 IYCFVS-FALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERR 60
I C+ F DHRG P P R TL + E WGVAY + G E+E A YL+ R
Sbjct: 25 IMCYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPEGKEEEVKA--YLDFR 82
Query: 61 ECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGP 120
E + V FY + QP V+++ T D N YLGPAPLE++A QI AVGP
Sbjct: 83 EKGGYRTSTVVFYPKDPSIQP--FNVLLYIGTCD---NPNYLGPAPLEDIAEQILNAVGP 137
Query: 121 CGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRK 154
G N +YLF+L ++ ++ E D+++ L VR+
Sbjct: 138 SGRNTEYLFELANSLRNLVPEDADEHLFSLEKLVRQ 173
>sp|Q5ZI66|CHAC2_CHICK Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2
PE=2 SV=1
Length = 186
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 8 FALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSK 67
F DHRG P P R TL + E WGVAY + G E E A YL+ RE
Sbjct: 32 FWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPAGQECEVKA--YLDFREKGGYRT 89
Query: 68 TLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDY 127
T V FY + +P V+++ T D N YLGPAPL+E+A QI AVGP G N +Y
Sbjct: 90 TTVVFYPKDSSIKPF--DVLLYIGTRD---NPNYLGPAPLQEIAEQIIDAVGPSGRNTEY 144
Query: 128 LFKLEKAMFDIGHED 142
LF+L +M ++ ED
Sbjct: 145 LFELANSMRNLVPED 159
>sp|Q8WUX2|CHAC2_HUMAN Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2
PE=2 SV=1
Length = 184
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 8 FALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSK 67
F DHRG P P R TL + WGVAY + G E+E A YL+ RE
Sbjct: 32 FWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKA--YLDFREKGGYRT 89
Query: 68 TLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDY 127
T V FY + ++P V+++ T D N YLGPAPLE++A QI A GP G N +Y
Sbjct: 90 TTVIFYPKDPTTKPF--SVLLYIGTCD---NPDYLGPAPLEDIAEQIFNAAGPSGRNTEY 144
Query: 128 LFKLEKAMFDIGHE--DDYIIELANEVRKEL 156
LF+L ++ ++ E D+++ L V++ L
Sbjct: 145 LFELANSIRNLVPEEADEHLFALEKLVKERL 175
>sp|Q641Z5|CHAC2_RAT Cation transport regulator-like protein 2 OS=Rattus norvegicus
GN=Chac2 PE=2 SV=1
Length = 178
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 8 FALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSK 67
F DHRG P P R TL + WGVAY + G E+E YL+ RE
Sbjct: 32 FWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRT 89
Query: 68 TLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDY 127
T V FY + ++P V+++ T D N YLGPAPLE++A QI A GP G N +Y
Sbjct: 90 TTVIFYPKDSTTKPF--SVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEY 144
Query: 128 LFKLEKAMFDIGHE--DDYIIELANEVRKEL 156
LF+L ++ + E D+++ L V++ L
Sbjct: 145 LFELADSIRKLVPEDADEHLFSLEKLVKERL 175
>sp|Q9CQG1|CHAC2_MOUSE Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2
PE=2 SV=1
Length = 178
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 8 FALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSK 67
F DHRG P P R TL + WGVAY + G E+E YL+ RE
Sbjct: 32 FWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRT 89
Query: 68 TLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDY 127
T V FY + ++P V+++ T D N YLGPAPLE++A QI A GP G N +Y
Sbjct: 90 TTVIFYPKDSTTKPF--SVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEY 144
Query: 128 LFKLEKAMFDIGHE--DDYIIELANEVRKEL 156
LF+L ++ + E D+++ L V++ L
Sbjct: 145 LFELADSVRKLVPEDADEHLFSLEKLVKERL 175
>sp|B3STU3|CHAC1_RAT Cation transport regulator-like protein 1 OS=Rattus norvegicus
GN=Chac1 PE=2 SV=1
Length = 222
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 15 HRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVD 71
HRG+ + P R TL + E WGVAY VRG E+ A++YL RE YD+K V
Sbjct: 71 HRGSDKMPGRVVTLLEDHEGCTWGVAYQVRG--EQVSEALKYLNVREAVLGGYDTKE-VT 127
Query: 72 FYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKL 131
FY + P QP LT + + +TP N YLGPAP E +A QI G G+N +YL +L
Sbjct: 128 FYPQDTPDQP-LT-ALAYVATP---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRL 182
Query: 132 EKAM 135
M
Sbjct: 183 ADFM 186
>sp|Q8R3J5|CHAC1_MOUSE Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1
PE=1 SV=2
Length = 223
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Query: 15 HRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVD 71
HRG+ + P R TL + +E WGVAY VRG E+ A++YL RE YD+K V
Sbjct: 72 HRGSDKMPGRVVTLLEDREGCTWGVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VT 128
Query: 72 FYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKL 131
FY + P QP LT + + +TP N YLGPAP E +A QI G G+N +YL +L
Sbjct: 129 FYPQDTPDQP-LT-ALAYVATP---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRL 183
Query: 132 EKAM 135
M
Sbjct: 184 ADFM 187
>sp|Q9BUX1|CHAC1_HUMAN Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1
PE=1 SV=2
Length = 264
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 15 HRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVD 71
HRG+ + P R TL + E WGVAY V+G E+ A++YL RE YD+K V
Sbjct: 113 HRGSDKMPGRVVTLLEDHEGCTWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VT 169
Query: 72 FYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKL 131
FY + P QP + + +TP N YLGPAP E +A QI G G+N +YL +L
Sbjct: 170 FYPQDAPDQP--LKALAYVATP---QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRL 224
Query: 132 EKAMFDIG--HEDDYIIELANEV 152
M G +D+++ + + V
Sbjct: 225 ADFMQLCGPQAQDEHLAAIVDAV 247
>sp|Q0IIH4|CHAC2_BOVIN Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2
PE=2 SV=1
Length = 176
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 21/151 (13%)
Query: 8 FALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSK 67
F DHRG P + WGVAY + G E+E A YL+ RE
Sbjct: 32 FWQGSTDHRGVPGKGS------------VWGVAYKLPVGKEEEVKA--YLDFREKGGYRT 77
Query: 68 TLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDY 127
T V FY + ++P V+++ T D N YLGPAPLE++A QI A GP G N +Y
Sbjct: 78 TTVIFYPKDSTTEPF--SVLLYIGTRD---NPNYLGPAPLEDIAEQIFNAAGPSGKNTEY 132
Query: 128 LFKLEKAMFDIGHE--DDYIIELANEVRKEL 156
LF+L +M + E D+++ L V++ L
Sbjct: 133 LFELANSMRSLVPEDADEHLFSLEKLVKERL 163
>sp|Q5SPB6|CHAC1_DANRE Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1
PE=2 SV=1
Length = 196
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 15 HRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVD 71
HRG + P R TL + + WGVA+ V G +E L +YL RE Y ++ VD
Sbjct: 51 HRGDDEMPGRVVTLIEEDDVCTWGVAFEVTGSQMEESL--KYLNVREAVRGGYLTRA-VD 107
Query: 72 FYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKL 131
F+ G +QP + +V+ +TPD N YLGPA EE+A QIA G G+N +YL +L
Sbjct: 108 FFPRGT-NQPPVQA-LVYIATPD---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRL 162
Query: 132 EKAM 135
+ M
Sbjct: 163 AEFM 166
>sp|P87305|CHAC_SCHPO Cation transport regulator-like protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC31F10.03 PE=3
SV=1
Length = 203
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 2 IYCFVS-----FALACIDHRGTPQHPARTCTLEKSQETI-------------CWGVAYCV 43
I CF+ F + DHRGT P TL +E CWG+A+ +
Sbjct: 30 IPCFIKGYVRRFWMRSEDHRGTVNSPGLVLTLIPYEEWKQFSDWSFTPFDEGCWGMAFRI 89
Query: 44 RGGPEKERLAM-EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYL 102
P K + EYL+ RE + V Y P L +V+ T S
Sbjct: 90 ---PAKYATQVREYLDDREVNGYTAHSVPVYAHTGDEIPVLENCLVYVGT----SKSPQF 142
Query: 103 GPAP-LEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKEL 156
P+ L +MA+ I+T G G+N YLF+L K + + E D ++ EL EVRK++
Sbjct: 143 QPSDDLTQMAKIISTRRGKSGDNFVYLFELAKCLRHLSPESKDIHVFELEAEVRKQM 199
>sp|P32656|CHAC_YEAST Cation transport regulator-like protein OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YER163C PE=1 SV=1
Length = 232
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 43/176 (24%)
Query: 1 MIYCFVS-FALACIDHRGTPQHPARTCTL-------------------------EKSQET 34
+I+ F F + DHRGTP +P R TL + +
Sbjct: 31 IIHGFARRFWQSSTDHRGTPANPGRVATLIPYEDIIRQTAFLKNVNLYSESAPIQDPDDL 90
Query: 35 ICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTG--------- 85
+ GV Y + PE + EYL RE + V+ + E A G
Sbjct: 91 VTIGVVYYI--PPEHAQEVREYLNVREQNGYTLHEVEVHLETNREHEAELGEALEQLPRH 148
Query: 86 ------VIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 135
V++ + + N+ ++GP ++E A+ IA + GP G+N +YL KLE+A+
Sbjct: 149 NKSGKRVLLTSVYIGTIDNEAFVGPETVDETAKVIAVSHGPSGSNYEYLAKLEQAL 204
>sp|P39163|CHAC_ECOLI Cation transport protein ChaC OS=Escherichia coli (strain K12)
GN=chaC PE=3 SV=3
Length = 231
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 7 SFALACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDS 66
+F L RGT P R L++ T GVAY + PE E L E + E +
Sbjct: 77 AFCLRLTAGRGTAHQPGRMLALKEGGRTT--GVAYRL---PE-ETLEQELTLLWKREMIT 130
Query: 67 KTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRD 126
+ + + + IVF P + Y + +A IA A GP G N
Sbjct: 131 GCYLPTWCQLDLDDGRTVNAIVFIMDP---RHPEYESDTRAQVIAPLIAAASGPLGTNAQ 187
Query: 127 YLFKLEKAMFDIGHEDDYIIELANEVRKEL 156
YLF LE+ + +G +DD + +L V+K L
Sbjct: 188 YLFSLEQELIKLGMQDDGLNDLLVSVKKLL 217
>sp|P02259|H5_CHICK Histone H5 OS=Gallus gallus PE=1 SV=2
Length = 190
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 122 GNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTKS 181
G++R + K K+ + +GH D I+L+ +R+ L G+LK+ K VG+S L KS
Sbjct: 45 GSSRQSIQKYIKSHYKVGHNADLQIKLS--IRRLLAA---GVLKQTKGVGASGSFRLAKS 99
Query: 182 HIPTLQLGLRPEAV 195
G + +AV
Sbjct: 100 DKAKRSPGKKKKAV 113
>sp|Q83BJ0|GPDA_COXBU Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=gpsA PE=1 SV=1
Length = 332
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 55 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 114
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 115 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 169
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 170 VGSSSRMPL 178
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|A9KF85|GPDA_COXBN Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=gpsA PE=3 SV=1
Length = 332
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 55 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 114
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 115 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 169
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 170 VGSSSRMPL 178
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|B6IYY5|GPDA_COXB2 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain CbuG_Q212) GN=gpsA PE=3 SV=1
Length = 332
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 55 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 114
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 115 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 169
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 170 VGSSSRMPL 178
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|A9N956|GPDA_COXBR Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=gpsA PE=3 SV=1
Length = 332
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 55 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 114
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 115 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 169
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 170 VGSSSRMPL 178
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|B6J4L3|GPDA_COXB1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Coxiella burnetii
(strain CbuK_Q154) GN=gpsA PE=3 SV=1
Length = 332
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 55 EYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQI 114
E + R + D+KT + + +G L +V T +V GP+ E+A +
Sbjct: 90 EVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATEL-GQVPMAVISGPSLATEVAANL 148
Query: 115 ATAVGPCGNN----RDYLFKLEKAMFDIGHEDDYI-IELANEVRKELGTAEKGILKERKL 169
TAV NN +D + +L F + DD I +EL V+ L A GI KL
Sbjct: 149 PTAVSLTSNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIA-TGISDGLKL 207
Query: 170 VGSSSRMPL 178
GS++R L
Sbjct: 208 -GSNARAAL 215
>sp|A5IAK9|SYT_LEGPC Threonine--tRNA ligase OS=Legionella pneumophila (strain Corby)
GN=thrS PE=3 SV=1
Length = 637
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 53 AMEYLERRECEYDSKTLVD--------FYREGE-------PSQPALTGVIVFTSTPDKVS 97
A++Y + EY +K + D YR+G+ P P+ + F T KV+
Sbjct: 144 AIQYFKSLGEEYKAKIIADIPENEALSLYRQGDFEDLCRGPHVPSTGFLKAFKLT--KVA 201
Query: 98 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA 134
Y+ G + E + R TA + +YLF+LE+A
Sbjct: 202 GAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLEEA 238
>sp|Q5ZS05|SYT_LEGPH Threonine--tRNA ligase OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=thrS
PE=3 SV=2
Length = 637
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 53 AMEYLERRECEYDSKTLVD--------FYREGE-------PSQPALTGVIVFTSTPDKVS 97
A++Y + EY +K + D YR+G+ P P+ + F T KV+
Sbjct: 144 AIQYFKDLGEEYKAKIIADIPENEALSLYRQGDFEDLCRGPHVPSTGFLKAFKLT--KVA 201
Query: 98 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA 134
Y+ G + E + R TA + +YLF+LE+A
Sbjct: 202 GAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLEEA 238
>sp|Q5X1H3|SYT_LEGPA Threonine--tRNA ligase OS=Legionella pneumophila (strain Paris)
GN=thrS PE=3 SV=1
Length = 637
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 53 AMEYLERRECEYDSKTLVD--------FYREGE-------PSQPALTGVIVFTSTPDKVS 97
A++Y + EY +K + D YR+G+ P P+ + F T KV+
Sbjct: 144 AIQYFKGLGEEYKAKIIADIPENEALSLYRQGDFEDLCRGPHVPSTGFLKAFKLT--KVA 201
Query: 98 NKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKA 134
Y+ G + E + R TA + +YLF+LE+A
Sbjct: 202 GAYWRGDSNNEMLQRIYGTAWADKKSLEEYLFRLEEA 238
>sp|A0RPW7|DNAK_CAMFF Chaperone protein DnaK OS=Campylobacter fetus subsp. fetus (strain
82-40) GN=dnaK PE=3 SV=1
Length = 626
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 115 ATAVGPCGNNRDYLFK-LEKAMFDIGHEDDYI---IELANEVRKELGTAEKGILKERKLV 170
A A GP +L K L +A F+ G DD + I NEV K+ G + KG +KE +V
Sbjct: 282 ADATGP-----KHLTKTLSRAKFE-GMIDDLVGETITKINEVVKDAGIS-KGDIKEVVMV 334
Query: 171 GSSSRMPLTKSHI 183
G S+R+PL + +
Sbjct: 335 GGSTRVPLVQEEV 347
>sp|P02258|H5_ANSAN Histone H5 OS=Anser anser anser PE=1 SV=1
Length = 193
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 122 GNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTK 180
G++R + K K+ + +G D I+LA +R+ L T G+LK+ K VG+S L K
Sbjct: 45 GSSRQSIQKYVKSHYKVGQHADLQIKLA--IRRLLTT---GVLKQTKGVGASGSFRLAK 98
>sp|Q9A217|SYL_CAUCR Leucine--tRNA ligase OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=leuS PE=3 SV=1
Length = 861
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 47 PEKERLAMEYLERRECEYDSKTL-VDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPA 105
P+K RL E R SK L F +GE G+ V+T+ PD + ++G A
Sbjct: 213 PDKVRLMQENWIGR-----SKGLRFKFQFDGEAPDGMAEGLEVYTTRPDTLFGASFVGIA 267
Query: 106 PLEEMARQIATA 117
P +A Q+A A
Sbjct: 268 PEHPLAEQLAAA 279
>sp|B8GW27|SYL_CAUCN Leucine--tRNA ligase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=leuS PE=3 SV=1
Length = 861
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 47 PEKERLAMEYLERRECEYDSKTL-VDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPA 105
P+K RL E R SK L F +GE G+ V+T+ PD + ++G A
Sbjct: 213 PDKVRLMQENWIGR-----SKGLRFKFQFDGEAPDGMAEGLEVYTTRPDTLFGASFVGIA 267
Query: 106 PLEEMARQIATA 117
P +A Q+A A
Sbjct: 268 PEHPLAEQLAAA 279
>sp|Q0IIJ2|H10_BOVIN Histone H1.0 OS=Bos taurus GN=H1F0 PE=2 SV=3
Length = 194
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 121 CGNNRDYLFKLEKAMFDIGHEDDYIIELANEVRKELGTAEKGILKERKLVGSSSRMPLTK 180
G++R + K K+ + +G D I+L+ +++ + T G+LK+ K VG+S L K
Sbjct: 43 AGSSRQSIQKYIKSHYKVGENADSQIKLS--IKRLVTT---GVLKQTKGVGASGSFRLAK 97
Query: 181 SHIP 184
S P
Sbjct: 98 SDEP 101
>sp|P45745|DHBF_BACSU Dimodular nonribosomal peptide synthase OS=Bacillus subtilis (strain
168) GN=dhbF PE=1 SV=4
Length = 2378
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 131 LEKAMFDIGHEDDYIIELANEVRKELGTAEKGILK---ERKLVGSSSRMPLTKSHIPTLQ 187
++ + F++G L + +R+ +G AE GI K E + G ++ + L +S P LQ
Sbjct: 985 IDDSFFELGGHSLLAARLMSRIREVMG-AELGIAKLFDEPTVAGLAAHLDLAQSACPALQ 1043
Query: 188 LGLRPEAVAM 197
RPE + +
Sbjct: 1044 RAERPEKIPL 1053
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,022,003
Number of Sequences: 539616
Number of extensions: 3232806
Number of successful extensions: 7071
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 7037
Number of HSP's gapped (non-prelim): 31
length of query: 199
length of database: 191,569,459
effective HSP length: 112
effective length of query: 87
effective length of database: 131,132,467
effective search space: 11408524629
effective search space used: 11408524629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)