BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029083
(199 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 116/152 (76%), Positives = 129/152 (84%), Gaps = 3/152 (1%)
Query: 12 ASIGAKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEE 71
AS+G EMLG PLN + R+SAP AS+PSTFK VALFSKKK A +K AVS ++E
Sbjct: 2 ASLGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPA---PAKSKAVSETSDE 58
Query: 72 LAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHA 131
LAKWYGPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHA
Sbjct: 59 LAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHA 118
Query: 132 RWAMLGAAGFIIPEAFNKFGANCGPEAVWFKV 163
RWAMLGAAGFIIPEA NK+GANCGPEAVWFK
Sbjct: 119 RWAMLGAAGFIIPEALNKYGANCGPEAVWFKT 150
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 50 SKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYD 109
S KA +++ ++ V ++YGPDR FL G ++ PEYLTGE PGDYG+D
Sbjct: 8 SGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWD 65
Query: 110 PFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFK 162
GLS P F++Y+ ELIHARWA+LGA G + PE +++ E VWFK
Sbjct: 66 TAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFK 118
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 182 FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFV 217
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 87/158 (55%), Gaps = 18/158 (11%)
Query: 20 LGNPLNVSSAVRTSAPGASNPSTFK-PVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGP 78
L +P V TSA NPS+ + A F+ +K+A +K VA S + WYGP
Sbjct: 8 LSSPTLTGKPVETSA----NPSSQELGGARFTMRKSA---TTKKVASSG-----SPWYGP 55
Query: 79 DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGA 138
DR +L E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA
Sbjct: 56 DRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGA 112
Query: 139 AGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
G + PE ++ G G EAVWFK FS L Y+
Sbjct: 113 LGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYL 149
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 197 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 232
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 19 MLGNPLNVSSAVRTSAPGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGP 78
M + +SS V A +++ + F + +K AA P KP A S + WYG
Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKP---KPAASSG-----SPWYGA 52
Query: 79 DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGA 138
DR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA
Sbjct: 53 DRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 109
Query: 139 AGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
G + PE + G G EAVWFK FS L Y+
Sbjct: 110 LGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 80/139 (57%), Gaps = 14/139 (10%)
Query: 39 NPSTFK-PVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEY 97
NPS+ + A F+ +K+A +K VA S + WYGPDR +L E P Y
Sbjct: 24 NPSSQELGAARFTMRKSA---TTKKVASSG-----SPWYGPDRVKYLGP---FSGESPSY 72
Query: 98 LTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPE 157
LTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE ++ G G E
Sbjct: 73 LTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-E 131
Query: 158 AVWFKVNLH-FSRSLLLYV 175
AVWFK FS L Y+
Sbjct: 132 AVWFKAGSQIFSEGGLDYL 150
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 198 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 233
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 68/118 (57%), Gaps = 11/118 (9%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
F+K + E+IH RWAMLGA G + PE F + G G EAVWFK FS L Y+
Sbjct: 91 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYL 147
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 46 VALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGD 105
V + + KKAA ++K +P +WYGPDR +L + P YLTGE PGD
Sbjct: 13 VKVEAAKKAAGTKQTK---AAPAKSAGIEWYGPDRAKWLGP---FSTNTPAYLTGEFPGD 66
Query: 106 YGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNL 165
YG+D GLS P+ F KY+ E+IHARWA+LGA G + PE + + E VWFK
Sbjct: 67 YGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGA 126
Query: 166 H-FSRSLLLYV 175
FS L Y+
Sbjct: 127 QIFSEGGLDYL 137
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
PG+ +DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 181 PGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFV 220
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L E P YLTGE PGDYG+D GLS P++F+K + E+IH RWA
Sbjct: 58 WYGPDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWA 114
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 115 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYL 155
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 203 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 238
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L +IP YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRPKYLGP---FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE +K G G EAVWFK FS L Y+
Sbjct: 106 MLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F+ + EL + R AM GF +
Sbjct: 194 FDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFV 229
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F + + EL R AML GF +
Sbjct: 194 FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFV 229
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 62 WYGPDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 119 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYL 159
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 207 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 242
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
F+K + E+IH RWAMLGA G + PE F + G G EAVW K FS L Y+
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYL 148
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E + R AM GF I
Sbjct: 196 FDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFI 231
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 62 WYGPDRVMYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 119 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYL 159
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F+ + E+ + R AM GF +
Sbjct: 207 FDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFV 242
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 60 SKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 119
+KPVA S + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 AKPVASS------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPET 90
Query: 120 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
F+K + E+IH RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 66/115 (57%), Gaps = 12/115 (10%)
Query: 62 PVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 121
PV+ SP WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 42 PVSDSP-------WYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 122 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
K + E+IH+RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 92 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 145
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
+K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P
Sbjct: 39 SKAKPVSSG------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADP 89
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 147
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 43 FKPVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEV 102
KPV S+K A A+ + +A + WYG DR ++L G S P YL+GE
Sbjct: 17 LKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL--GPFSGSP-PSYLSGEF 73
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFK 162
PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE K G G EAVWFK
Sbjct: 74 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFK 132
Query: 163 VNLH-FSRSLLLYV 175
F+ L Y+
Sbjct: 133 AGSQIFAEGGLDYL 146
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 87 GLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
G L E P Y G +DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 179 GPLGEVEDPIYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 229
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
F+K + E+IH RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 148
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
F+K + E+IH RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 91 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 147
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 67/118 (56%), Gaps = 11/118 (9%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KP + S + WYGPDR +L E P YLTGE P DYG+D GLS P+
Sbjct: 41 KAKPASSS------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPSDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
F+K + E+IH RWAMLGA G + PE F + G G EAVWFK FS L Y+
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYL 148
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
+K+KPV+ S + WYGP+R +L E P YLTGE PGDYG+D GLS P
Sbjct: 40 SKAKPVSSS------SPWYGPNRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADP 90
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK FS+ L Y+
Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYL 148
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 61 KPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDF 120
K V V + WYGPDR +L E P YLTGE PGDYG+D GLS P+ F
Sbjct: 32 KTVGKPKVAASGSPWYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETF 88
Query: 121 SKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
+K + E+IH+RWAMLGA G + PE ++ G G EAVWFK FS L Y+
Sbjct: 89 AKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYL 143
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 191 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 226
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 148
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 48 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 105 MLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYL 145
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR FL + P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 48 WYGADRPKFLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G I PE +K G G EAVWFK FS L Y+
Sbjct: 105 MLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYL 145
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 193 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 148
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 148
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 39 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 95
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE ++ G G EAVWFK FS L Y+
Sbjct: 96 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYL 136
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 184 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 219
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 47 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 103
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE ++ G G EAVWFK FS L Y+
Sbjct: 104 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYL 144
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 192 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 227
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 74 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
++YGP+R +L G + P YLTGE PGDYG+D GLS P+ F +Y+ ELIHARW
Sbjct: 35 EFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARW 92
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
AMLGA G PE K G G EAVWFK FS L Y+
Sbjct: 93 AMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYL 134
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
PG+ +DP GL+ PD F++ + E+ + R A GF +
Sbjct: 178 PGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFV 217
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 11/119 (9%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
AK KP A + WYG DR ++L G L E P YLTGE PGDYG+D GLS P
Sbjct: 34 AKPKPAASG------SPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 84
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 85 ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 142
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 190 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 225
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 47 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE +K G G EAVWFK FS L Y+
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYL 144
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + EL + R AM GF +
Sbjct: 192 FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 227
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 47 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE +K G G EAVWFK FS L Y+
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYL 144
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + EL + R AM GF +
Sbjct: 192 FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 227
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 148
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 10/104 (9%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPA 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFK 162
F+K + E+IH RW MLGA G + PE F + G G EAVWFK
Sbjct: 91 TFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFK 133
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFV 230
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L +IP YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 49 WYGPDRPKYLGP---FSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G PE K G G EAVWFK F+ L Y+
Sbjct: 106 MLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYL 146
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + EL + R AM GF +
Sbjct: 194 FDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFV 229
>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene
pratensis PE=2 SV=2
Length = 205
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L + P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 48 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE K G G EAVWFK F L Y+
Sbjct: 105 MLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEGGLDYL 145
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D LS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAELSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
F+K + E+IH RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 148
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 34 APGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEELAK--WYGPDRRIFLPEGLLDR 91
A AS+ + K + K A P + VA+ ++ WYGPDR +L
Sbjct: 5 AATASSTTVVKATPFLGQTKNANPLRDV-VAMGSARFTMSNDLWYGPDRVKYLGP---FS 60
Query: 92 SEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFG 151
++ P YL GE PGDYG+D GLS P+ F+K +A E+IH RWAMLGA G I PE K+
Sbjct: 61 AQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWV 120
Query: 152 ANCGPEAVWFKVNLH-FSRSLLLYV 175
E VWFK FS L Y+
Sbjct: 121 KVDFKEPVWFKAGSQIFSDGGLDYL 145
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
PG +DP GL+ P F++ + E+ + R AM GF +
Sbjct: 189 PGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 65 VSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQ 124
V P + WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ +
Sbjct: 39 VKPTGPSGSPWYGSDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNR 95
Query: 125 AYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
E+IH RWAMLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 96 ELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 29 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 85
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EA WFK FS L Y+
Sbjct: 86 MLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYL 126
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 69/119 (57%), Gaps = 11/119 (9%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
AK+K V+ S + WYG DR ++L G L E P YLTGE PGDYG+D GLS P
Sbjct: 39 AKAKQVSSS------SPWYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 89
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
+ F+K + E+IH RWAMLGA G + PE + G G EA WFK FS L Y+
Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAGWFKAGSQIFSDGGLDYL 147
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+++P F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 27 SSAVRTSAPGASNPSTFKPVALFSKKKAA--PPAKSKPVAVSPVNEELAKWYGPDRRIFL 84
SA A G S + V F + + KS P ++ WYG DR +L
Sbjct: 8 QSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSI---------WYGEDRPKYL 58
Query: 85 PEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIP 144
+ P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + P
Sbjct: 59 GP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 145 EAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
E +K G G EAVWFK FS L Y+
Sbjct: 116 EILSKNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH RWA
Sbjct: 49 WYGEDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE +K G G EAVWFK FS L Y+
Sbjct: 106 MLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH RWA
Sbjct: 49 WYGEDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE +K G G EAVWFK FS L Y+
Sbjct: 106 MLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYL 146
Score = 30.4 bits (67), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYGPDR P+ L SE P YLTGE PGDYG+D +S P+ F+K + E+IH RW
Sbjct: 50 WYGPDR----PKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRW 105
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYVVYLLMVLLMSCF----C 188
AMLGA G + PE K G G EAVWFK FS L Y ++ S C
Sbjct: 106 AMLGALGCVFPELLAKNGLKFG-EAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWAC 164
Query: 189 RLELYFLMETH 199
++ L L+E +
Sbjct: 165 QVVLMGLIEGY 175
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYL 147
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV 231
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKVNLH-FSRSLLLYV 175
MLGA G + PE + G G EAVWFK FS L Y+
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYL 147
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,297,099
Number of Sequences: 539616
Number of extensions: 3617815
Number of successful extensions: 8690
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 8406
Number of HSP's gapped (non-prelim): 249
length of query: 199
length of database: 191,569,459
effective HSP length: 112
effective length of query: 87
effective length of database: 131,132,467
effective search space: 11408524629
effective search space used: 11408524629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)