BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029088
(199 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297834764|ref|XP_002885264.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331104|gb|EFH61523.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/197 (66%), Positives = 156/197 (79%), Gaps = 7/197 (3%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDAD----PLPDS 56
+A L+RR YRSLL NP+ SQS F T+NI SSR DSD DE + +SD + P
Sbjct: 5 VATLSRRLYRSLLSNPRISQSSMSFCTNNI---SSREDSDFDELSANSDTESPIEPKASD 61
Query: 57 SPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIR 116
++ SG++R +RPLENGLD GIFKAILVGQVGQ P+QKKLKSGRTVTLFS+GTGGIR
Sbjct: 62 PVSRFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIR 121
Query: 117 NNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
NNRRPL NE+P EYA+R AVQWHRVSVYPERL +V+K++ PG+ IY+EGNLE K+F DP
Sbjct: 122 NNRRPLINEDPREYASRSAVQWHRVSVYPERLAELVLKNVEPGTVIYLEGNLETKIFTDP 181
Query: 177 ITGLVRRIREIAIRRNG 193
+TGLVRRIRE+AIRRNG
Sbjct: 182 VTGLVRRIREVAIRRNG 198
>gi|15229675|ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis thaliana]
gi|9294319|dbj|BAB02216.1| unnamed protein product [Arabidopsis thaliana]
gi|332642598|gb|AEE76119.1| single-strand DNA-binding protein [Arabidopsis thaliana]
Length = 217
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 152/193 (78%), Gaps = 5/193 (2%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
MA L+RR YRSLL NP+ SQ+ F T+NI S DSD DE + S +P ++
Sbjct: 5 MATLSRRLYRSLLSNPRISQASMSFCTNNITSPE---DSDFDE--LESPIEPKASDPVSR 59
Query: 61 NSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRR 120
SG++R +RPLENGLD GIFKAILVGQVGQ P+QKKLKSGRTVTLFS+GTGGIRNNRR
Sbjct: 60 FSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRR 119
Query: 121 PLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGL 180
PL NE+P EYA+R AVQWHRVSVYPERL +V+K++ PG+ IY+EGNLE K+F DP+TGL
Sbjct: 120 PLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGL 179
Query: 181 VRRIREIAIRRNG 193
VRRIRE+AIRRNG
Sbjct: 180 VRRIREVAIRRNG 192
>gi|449439377|ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
gi|449486863|ref|XP_004157425.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 234
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 150/214 (70%), Gaps = 19/214 (8%)
Query: 1 MAALTRRFYRSLLLNPKFSQS----PKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDS 56
M AL+RR RSLL N K S P + T+N+ S R SD+ ES I SD DS
Sbjct: 4 MVALSRRLCRSLLSNSKASHHYDILPVTYCTNNL---SFRSVSDITESGIESDLYTELDS 60
Query: 57 SPTQNSGQQ-----------RESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTV 105
+ N R ++RPLENGLD GI+KAILVG+VGQSP+QK+LKSGRTV
Sbjct: 61 NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 120
Query: 106 TLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVE 165
TL S+GTGGIRNNRRPL NE P EYANRCAVQWHRVS+YP RLG +VMKH+VPGS +Y+E
Sbjct: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 180
Query: 166 GNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
GNLE K+F D +TGLVRRIRE+AIR NG L+F
Sbjct: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGR-LVFL 213
>gi|255541852|ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
gi|223549170|gb|EEF50659.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
Length = 223
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/200 (64%), Positives = 155/200 (77%), Gaps = 9/200 (4%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
MA ++RR RSLL + K S+ KPF T N+ SS + D DES +SD D + SP+
Sbjct: 1 MANISRRLCRSLLSSSKISKFSKPFCTGNL--SSREEEHDSDESTHNSDTDSISTQSPSS 58
Query: 61 NSGQQ-------RESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG 113
S RE + RPLENGLD G++KAILVGQVGQSP+QKKL+SG++VT+FSLGTG
Sbjct: 59 TSSPPPPESSPQREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTG 118
Query: 114 GIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
GIRNNRRP++NE P EYANRCAVQWHRVSVYPERLG +VMKHL+PGS +Y+EGNLE KVF
Sbjct: 119 GIRNNRRPMQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVF 178
Query: 174 NDPITGLVRRIREIAIRRNG 193
DPITGLVRRIRE+AIR++G
Sbjct: 179 TDPITGLVRRIREVAIRQDG 198
>gi|224118858|ref|XP_002317924.1| predicted protein [Populus trichocarpa]
gi|222858597|gb|EEE96144.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 157/200 (78%), Gaps = 5/200 (2%)
Query: 1 MAALTRRFYRSLLL-NPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPT 59
MA L+RR YRSLL NPK SQ PF TS+ ++++ ++L + + P ++ +
Sbjct: 5 MAVLSRRLYRSLLSSNPKISQLSMPFCTSSSTTTTTTTTNNL---SFREEDSPSSSTTTS 61
Query: 60 QNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNR 119
+ S R DRPLENGLD G++KAILVGQVGQ+P+QKKL+SGR +T+FS+GTGGIRNNR
Sbjct: 62 EGSSGSRMVQDRPLENGLDAGVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGIRNNR 121
Query: 120 RPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITG 179
RPL+NE+P EYANRCAVQWHRVSVYPERLG VVM++++PGS +YVEGNLE KVF DPITG
Sbjct: 122 RPLQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPITG 181
Query: 180 LVRRIREIAIRRNGTYLIFF 199
LVRRIREIA+R+NG L+F
Sbjct: 182 LVRRIREIAVRQNGR-LVFL 200
>gi|225427470|ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera]
gi|296088446|emb|CBI37437.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/150 (70%), Positives = 126/150 (84%), Gaps = 2/150 (1%)
Query: 50 ADPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFS 109
DP+ DS PT + Q R DRPLENGLD GI+KAILVG+ GQ+P+QK+L+SGR VTLFS
Sbjct: 54 VDPIADSPPTDTT-QNRMVVDRPLENGLDVGIYKAILVGKAGQTPLQKRLRSGRMVTLFS 112
Query: 110 LGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLE 169
+GTGGIRNNRRPL+NE+P EYANR AVQWHRV+VYPE LG +VMKH+ PGS +Y+EGNLE
Sbjct: 113 VGTGGIRNNRRPLDNEDPKEYANRSAVQWHRVTVYPENLGNIVMKHVSPGSVLYLEGNLE 172
Query: 170 QKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
K+F DP+TGLVRRIRE+AIRRNG L+F
Sbjct: 173 TKIFTDPVTGLVRRIREVAIRRNGR-LVFL 201
>gi|356511595|ref|XP_003524509.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 207
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 140/195 (71%), Gaps = 20/195 (10%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
M L+RR Y SLL P + + F T ++F DSD +AD PD P
Sbjct: 5 MMTLSRRLYCSLLRTP---NAYRHFSTDHLF------DSD--------EADSAPDP-PAP 46
Query: 61 NSGQQRESF--DRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNN 118
++ Q+ E F DRPLENGLD GI++AILVG+ GQ+P+QKKLKSG +VTL S+GTGGI NN
Sbjct: 47 DAVQEEEKFVIDRPLENGLDVGIYRAILVGKAGQAPLQKKLKSGTSVTLLSVGTGGIHNN 106
Query: 119 RRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPIT 178
RRP +ENP +YANR A+QWHRVSVYP++LG +V KH+VPGS +YVEGNLE K F DPIT
Sbjct: 107 RRPRVDENPKDYANRSAIQWHRVSVYPQKLGDLVTKHVVPGSMLYVEGNLETKCFTDPIT 166
Query: 179 GLVRRIREIAIRRNG 193
G+ RRIREIA+RRNG
Sbjct: 167 GIARRIREIAVRRNG 181
>gi|357135683|ref|XP_003569438.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 214
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 142/201 (70%), Gaps = 21/201 (10%)
Query: 4 LTRRFYRSLLLNPKF-SQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNS 62
L RRF LLL+ +F S S +PF T++ S SDA+P PD +P
Sbjct: 11 LGRRF---LLLSRRFVSSSLRPFSTNS------------SPSLAGSDAEPDPDHAPADEG 55
Query: 63 GQ-----QRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRN 117
Q + + RPLENGLDPGI+KAI+VG+VGQ P+QK+L+SG+TV LFSLGTGGIRN
Sbjct: 56 NQPPNQHRAPNTTRPLENGLDPGIYKAIMVGKVGQEPMQKRLRSGKTVVLFSLGTGGIRN 115
Query: 118 NRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPI 177
NRRPL+NE P +YA+R +VQWHRV VYPERLG + +K++ G+ +Y+EGNLE KVF+DPI
Sbjct: 116 NRRPLDNEEPHQYADRSSVQWHRVCVYPERLGSLTLKNVKIGTVLYLEGNLETKVFSDPI 175
Query: 178 TGLVRRIREIAIRRNGTYLIF 198
TGLVRRIREIA+R NG L
Sbjct: 176 TGLVRRIREIAVRANGRLLFL 196
>gi|115438823|ref|NP_001043691.1| Os01g0642900 [Oryza sativa Japonica Group]
gi|55297106|dbj|BAD68750.1| single-strand DNA binding protein-like [Oryza sativa Japonica
Group]
gi|113533222|dbj|BAF05605.1| Os01g0642900 [Oryza sativa Japonica Group]
gi|125571356|gb|EAZ12871.1| hypothetical protein OsJ_02792 [Oryza sativa Japonica Group]
gi|215686631|dbj|BAG88884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707058|dbj|BAG93518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 113/137 (82%)
Query: 62 SGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRP 121
+ + R RPLENGLDPGI+KAI+VG+VGQ P+QK+L+SGRTV LFSLGTGGIRNNRRP
Sbjct: 70 AARPRAGDTRPLENGLDPGIYKAIMVGKVGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRP 129
Query: 122 LENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLV 181
L+ E P +YA RC+VQWHRV +YPERLG + +KH+ GS +Y+EGNLE KVF+DPITGLV
Sbjct: 130 LDREEPHQYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLV 189
Query: 182 RRIREIAIRRNGTYLIF 198
RRIREIA+R NG L
Sbjct: 190 RRIREIAVRSNGRLLFL 206
>gi|125527031|gb|EAY75145.1| hypothetical protein OsI_03039 [Oryza sativa Indica Group]
Length = 224
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 113/137 (82%)
Query: 62 SGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRP 121
+ + R RPLENGLDPGI+KAI+VG++GQ P+QK+L+SGRTV LFSLGTGGIRNNRRP
Sbjct: 70 AARPRAGDTRPLENGLDPGIYKAIMVGKLGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRP 129
Query: 122 LENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLV 181
L+ E P +YA RC+VQWHRV +YPERLG + +KH+ GS +Y+EGNLE KVF+DPITGLV
Sbjct: 130 LDREEPHQYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLV 189
Query: 182 RRIREIAIRRNGTYLIF 198
RRIREIA+R NG L
Sbjct: 190 RRIREIAVRSNGRLLFL 206
>gi|194701226|gb|ACF84697.1| unknown [Zea mays]
gi|195612674|gb|ACG28167.1| single-stranded DNA-binding protein [Zea mays]
gi|414881237|tpg|DAA58368.1| TPA: single-stranded DNA-binding protein [Zea mays]
Length = 224
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 139/195 (71%), Gaps = 3/195 (1%)
Query: 4 LTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSG 63
++RRF S L + + + + F S+ S V+SDL+ AD + T NS
Sbjct: 15 MSRRFLSSPLGSLSTTTATRSFSISSPGFKSFVVESDLENEHDQPPADQ--NRQQTSNSP 72
Query: 64 QQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLE 123
+ ++ RPLENGLDPGI+KAILVG+VGQ P+QK+L+SG+TV LFSLGTGGIRNNRRPL+
Sbjct: 73 RPPDT-TRPLENGLDPGIYKAILVGKVGQEPMQKRLRSGKTVVLFSLGTGGIRNNRRPLD 131
Query: 124 NENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRR 183
E P +YA+RC+VQWHRV VYP+RLG V + ++ G+ +Y+EGNLE KVF DPITGLVRR
Sbjct: 132 REEPHQYADRCSVQWHRVCVYPDRLGTVALNNVKTGTILYLEGNLETKVFCDPITGLVRR 191
Query: 184 IREIAIRRNGTYLIF 198
IREIA+R +G L
Sbjct: 192 IREIAVRSSGRLLFL 206
>gi|242058153|ref|XP_002458222.1| hypothetical protein SORBIDRAFT_03g029310 [Sorghum bicolor]
gi|241930197|gb|EES03342.1| hypothetical protein SORBIDRAFT_03g029310 [Sorghum bicolor]
Length = 221
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
Query: 39 SDLDESAIHSDADPLPDSSPTQNSGQQRE-SFDRPLENGLDPGIFKAILVGQVGQSPVQK 97
SD + H P D Q S + R RPLENGLDPGI+KAILVG+VGQ P+QK
Sbjct: 43 SDAESDPEHEHYQPRADQDRQQTSNRPRPPDTTRPLENGLDPGIYKAILVGKVGQEPMQK 102
Query: 98 KLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLV 157
+L++GRTV LFSLGTGGIRNNRRPL+ E P +YA+RC+VQWHRV VYPERLG + +K++
Sbjct: 103 RLRNGRTVVLFSLGTGGIRNNRRPLDREEPHQYADRCSVQWHRVCVYPERLGTLALKNVK 162
Query: 158 PGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
G+ +Y+EGNLE KVF DPITGLVRRIREIA+R G L
Sbjct: 163 TGTVLYLEGNLETKVFCDPITGLVRRIREIAVRSTGRLLFL 203
>gi|357477659|ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355510170|gb|AES91312.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 253
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 132/164 (80%), Gaps = 10/164 (6%)
Query: 31 FSSSSRVDSDLDESAIHSDAD-PLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQ 89
F +++ SD D DAD P SP Q +R FDRPLENGLDPG+++AILVG+
Sbjct: 59 FCTTTTSLSDYD------DADSAAPSPSPEQT---ERTFFDRPLENGLDPGVYRAILVGK 109
Query: 90 VGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLG 149
GQ P+QKKLKSG VTL S+GTGGIRNNRRPL++ENP EYANRCAVQWHRV+VYPERLG
Sbjct: 110 AGQKPLQKKLKSGTVVTLLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLG 169
Query: 150 GVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
++MK ++PGST+YVEGNLE KVF+DP+TGLVRR+RE+A+RRNG
Sbjct: 170 NLLMKTVLPGSTLYVEGNLETKVFSDPVTGLVRRVREVAVRRNG 213
>gi|388519493|gb|AFK47808.1| unknown [Medicago truncatula]
Length = 239
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 126/148 (85%), Gaps = 4/148 (2%)
Query: 47 HSDAD-PLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTV 105
+ DAD P SP Q +R FDRPLENGLDPG+++AILVG+ GQ P+QKKLKSG V
Sbjct: 69 YDDADSAAPSPSPEQT---ERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVV 125
Query: 106 TLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVE 165
TL S+GTGGIRNNRRPL++ENP EYANRCAVQWHRV+VYPERLG ++MK ++PGST+YVE
Sbjct: 126 TLLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVE 185
Query: 166 GNLEQKVFNDPITGLVRRIREIAIRRNG 193
GNLE KVF+DP+TGLVRR+RE+A+RRNG
Sbjct: 186 GNLETKVFSDPVTGLVRRVREVAVRRNG 213
>gi|357477593|ref|XP_003609082.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355510137|gb|AES91279.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 239
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 126/148 (85%), Gaps = 4/148 (2%)
Query: 47 HSDAD-PLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTV 105
+ DAD P SP Q +R FDRPLENGLDPG+++AILVG+ GQ P+QKKLKSG V
Sbjct: 69 YDDADSAAPSPSPEQT---ERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVV 125
Query: 106 TLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVE 165
TL S+GTGGIRNNRRPL++ENP EYANRCAVQWHRV+VYPERLG ++MK ++PGST+YVE
Sbjct: 126 TLLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVE 185
Query: 166 GNLEQKVFNDPITGLVRRIREIAIRRNG 193
GNLE KVF+DP+TGLVRR+RE+A+RRNG
Sbjct: 186 GNLETKVFSDPVTGLVRRVREVAVRRNG 213
>gi|226496599|ref|NP_001151839.1| single-stranded DNA-binding protein [Zea mays]
gi|195650155|gb|ACG44545.1| single-stranded DNA-binding protein [Zea mays]
Length = 224
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 124/162 (76%), Gaps = 3/162 (1%)
Query: 37 VDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQ 96
V+SDL+ AD + T NS + ++ RPLENGLDPGI+KAILVG+VGQ P+Q
Sbjct: 48 VESDLENEQDQRPADQ--NRQQTSNSPRPPDT-TRPLENGLDPGIYKAILVGKVGQEPMQ 104
Query: 97 KKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHL 156
K+L+SG+TV LFSLGTGGIRNNRRPL+ E P +YA+RC+VQWHRV VYP+RLG V + ++
Sbjct: 105 KRLRSGKTVVLFSLGTGGIRNNRRPLDREEPHQYADRCSVQWHRVCVYPDRLGTVALNNV 164
Query: 157 VPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
G+ +Y+EGNLE KVF DPITGLVRRIREIA+R +G L
Sbjct: 165 KTGTILYLEGNLETKVFCDPITGLVRRIREIAVRSSGRLLFL 206
>gi|147819885|emb|CAN67299.1| hypothetical protein VITISV_002040 [Vitis vinifera]
Length = 122
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 106/118 (89%), Gaps = 2/118 (1%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AILVG+ GQ+P+QK+L+SGR VTLFS+GTGGIRNNRRPL+NE+P EYANR AVQWHRV+V
Sbjct: 2 AILVGKAGQTPLQKRLRSGRMVTLFSVGTGGIRNNRRPLDNEDPKEYANRSAVQWHRVTV 61
Query: 144 YPERLGGVVMKHLVPG--STIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
YPE LG +VMKH+ PG S +Y+EGNLE K+F DP+TGLVRRIRE+AIRRNGT++IFF
Sbjct: 62 YPENLGNIVMKHVSPGLSSVLYLEGNLETKIFTDPVTGLVRRIREVAIRRNGTFMIFF 119
>gi|116788306|gb|ABK24831.1| unknown [Picea sitchensis]
Length = 223
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 107/127 (84%), Gaps = 1/127 (0%)
Query: 73 LENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYAN 132
++N D GI++AIL+G+VGQ PVQK+L+SGR +T+FS+GTGG+ NNRRPLE+E+P EYA+
Sbjct: 78 IQNSPDLGIYRAILLGEVGQLPVQKRLRSGRVITMFSVGTGGMHNNRRPLEDESPREYAD 137
Query: 133 RCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRN 192
R VQWHRVS+Y + LGG+ M+HL G+ +Y+EGNLE K+F+DPITGLV+R+REIAIRR
Sbjct: 138 RSMVQWHRVSIYADNLGGIAMQHLKQGAHVYLEGNLETKIFSDPITGLVKRVREIAIRRQ 197
Query: 193 GTYLIFF 199
G LIF
Sbjct: 198 GR-LIFL 203
>gi|168046407|ref|XP_001775665.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672938|gb|EDQ59468.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 92/116 (79%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AIL+G+VGQ+P QK LKSGR VT+FS+GTGG+ NR+ L+ E P E+A R ++QWHR++V
Sbjct: 1 AILLGKVGQAPAQKVLKSGRAVTIFSVGTGGMHLNRKMLDGETPEEFAERSSIQWHRIAV 60
Query: 144 YPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
Y ER+G ++++ + GS +YVEGN+E +++NDP T V+RIREIA+R+NG ++ +
Sbjct: 61 YQERIGQLILRSMKQGSQVYVEGNIETRIYNDPNTQQVKRIREIAVRQNGILMLLY 116
>gi|168004403|ref|XP_001754901.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694005|gb|EDQ80355.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 126
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 90/115 (78%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
+AIL+G+VGQ+P QK LKSGR VT+FS+GTGG+ NRR + E P E+A R +QWHRV+
Sbjct: 1 QAILLGEVGQAPAQKILKSGRAVTVFSVGTGGMHLNRRMFDGETPEEFAERSNMQWHRVA 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLI 197
VY E++G ++++ + G+ +YVEGN+E +V+ DP+T V+RIREIA+R+NG L+
Sbjct: 61 VYQEKVGNLILRSMKQGAQVYVEGNMETRVYTDPVTQQVKRIREIAVRQNGRVLL 115
>gi|168022770|ref|XP_001763912.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684917|gb|EDQ71316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 89/116 (76%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AIL+G+VGQ+P QK LKSGR VT+FS+GTGG+ NRR + E E+A R +QWHRV+V
Sbjct: 1 AILLGEVGQAPSQKVLKSGRAVTIFSVGTGGMHLNRRMFDGETLEEFAERSNMQWHRVAV 60
Query: 144 YPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
Y E +G ++++ + GS +YVEGN+E +++NDP T V+RIREIA+R+NGT +++
Sbjct: 61 YQEHIGHLILRSMKQGSQVYVEGNIETRIYNDPNTQKVKRIREIAVRQNGTSMLYI 116
>gi|302821151|ref|XP_002992240.1| hypothetical protein SELMODRAFT_448693 [Selaginella moellendorffii]
gi|300140007|gb|EFJ06737.1| hypothetical protein SELMODRAFT_448693 [Selaginella moellendorffii]
Length = 210
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 14/156 (8%)
Query: 39 SDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKK 98
+D DE H P + ++ F P + PGI+KAILVG VGQ PV++
Sbjct: 62 ADTDEEEPH----------PQETKYMKKAVFASP-DKYYGPGIYKAILVGSVGQKPVERV 110
Query: 99 LKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVM-KHLV 157
+ +V +FSLGTGG+RNNR+ LE E+ YA R QWHRV V+ +LG + M + L
Sbjct: 111 FATNVSVVIFSLGTGGLRNNRKQLEGEHWETYAERSFTQWHRVCVF--KLGLLDMARKLT 168
Query: 158 PGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
G+ +Y+EG++E +V++D +TG ++R+REI +R+ G
Sbjct: 169 KGNNVYLEGSIETRVYSDAVTGALKRVREICVRQCG 204
>gi|449485644|ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 111/185 (60%), Gaps = 20/185 (10%)
Query: 20 QSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRE--SFDRPLE-NG 76
++P F ++ F +S++ +S S S+ D + +N G++ + +F L+ G
Sbjct: 13 RTPSSNFPTSSFVASAQTNSKFWLSTGASEGD----NDVEKNDGEEDDYDTFSNELQPQG 68
Query: 77 LDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTE 129
+DP G+ KAI+ G+VGQ+PVQK L++GRT+T+F++GTGG+ + R + P
Sbjct: 69 VDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIFDGRDLPK- 127
Query: 130 YANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
QWHR++V+ E LG ++ L +++YVEG++E +V+ND I G V+ I EI +
Sbjct: 128 -----PAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEICV 182
Query: 190 RRNGT 194
RR+GT
Sbjct: 183 RRDGT 187
>gi|302800912|ref|XP_002982213.1| hypothetical protein SELMODRAFT_115961 [Selaginella moellendorffii]
gi|300150229|gb|EFJ16881.1| hypothetical protein SELMODRAFT_115961 [Selaginella moellendorffii]
Length = 122
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AILVG VGQ PV++ + +V +FSLGTGG+RNNR+ LE E+ YA R QWHRV V
Sbjct: 1 AILVGSVGQKPVERVFATNVSVVIFSLGTGGLRNNRKQLEGEHWETYAERSFTQWHRVCV 60
Query: 144 YPERLGGVVM-KHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
+ +LG + M + L G+ +Y+EG++E +V++D +TG ++R+REI +R+ G + F
Sbjct: 61 F--KLGLLDMARKLTKGTNVYLEGSIETRVYSDAVTGALKRVREICVRQCGELPLLF 115
>gi|449435603|ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 110/185 (59%), Gaps = 20/185 (10%)
Query: 20 QSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRE--SFDRPLE-NG 76
++P F ++ F +S++ S S S+ D + +N G++ + +F L+ G
Sbjct: 13 RTPSSNFPTSSFVASAQTSSKFWLSTGASEGD----NDVEKNDGEEDDYDTFSNELQPQG 68
Query: 77 LDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTE 129
+DP G+ KAI+ G+VGQ+PVQK L++GRT+T+F++GTGG+ + R + P
Sbjct: 69 VDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIFDGRDLPK- 127
Query: 130 YANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
QWHR++V+ E LG ++ L +++YVEG++E +V+ND I G V+ I EI +
Sbjct: 128 -----PAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEICV 182
Query: 190 RRNGT 194
RR+GT
Sbjct: 183 RRDGT 187
>gi|326500314|dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 98/175 (56%), Gaps = 28/175 (16%)
Query: 27 TSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLE-NGLDP------ 79
TS +SS+ SD+DE D L DS R LE +DP
Sbjct: 28 TSRAWSSTVSF-SDIDEKDDMGDDGDLKDSR-------------RELEPQSVDPKKGWGF 73
Query: 80 -GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ +AI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + P QW
Sbjct: 74 RGVHRAIICGKVGQAPVQKILRNGRTVTIFTIGTGGMFDQRVIGSADTPK------PAQW 127
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
HR++V+ E LG ++ LV S +Y+EG++E +++ND I G VR I EI IR +G
Sbjct: 128 HRIAVHSEHLGAYAVQKLVKNSAVYIEGDIETRIYNDGIDGQVRNIPEICIRGDG 182
>gi|255576768|ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
gi|223531260|gb|EEF33103.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
Length = 213
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 82/125 (65%), Gaps = 13/125 (10%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + P
Sbjct: 71 GVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIVGAKDLPK 130
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
QWHR++V+ E LG ++ L S++YVEG +E +V+ND I+G V+ I EI
Sbjct: 131 ------PAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVKNIPEIC 184
Query: 189 IRRNG 193
IRR+G
Sbjct: 185 IRRDG 189
>gi|4850285|emb|CAB43041.1| putative protein [Arabidopsis thaliana]
gi|7267804|emb|CAB81207.1| putative protein [Arabidopsis thaliana]
Length = 254
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 84/129 (65%), Gaps = 13/129 (10%)
Query: 75 NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENP 127
+G+DP G+ +AI+ G+VGQ+P+QK L++GRTVT+F++GTGG+ + R P
Sbjct: 58 HGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQP 117
Query: 128 TEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI
Sbjct: 118 K------PAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 171
Query: 188 AIRRNGTYL 196
+RR+G Y+
Sbjct: 172 CVRRDGMYV 180
>gi|115464809|ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|48475206|gb|AAT44275.1| putative single-strand DNA binding protein [Oryza sativa Japonica
Group]
gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|215706976|dbj|BAG93436.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 206
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 27/201 (13%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
M +L+ + L + + P F+ + SS+ SD+DE + D DS
Sbjct: 1 MNSLSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSR--- 57
Query: 61 NSGQQRESFDRPLE-NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGT 112
R LE +DP G+ +AI+ G+VGQ PVQK L++GRTVT+F++GT
Sbjct: 58 ----------RELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGT 107
Query: 113 GGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKV 172
GG+ + R + + P QWHR++++ ++LG ++ LV S +YVEG++E +V
Sbjct: 108 GGMFDQRVVGDADLPK------PAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRV 161
Query: 173 FNDPITGLVRRIREIAIRRNG 193
+ND I V+ I EI +RR+G
Sbjct: 162 YNDSINDQVKNIPEICLRRDG 182
>gi|218197079|gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
gi|222632182|gb|EEE64314.1| hypothetical protein OsJ_19151 [Oryza sativa Japonica Group]
Length = 245
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 27/201 (13%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
M +L+ + L + + P F+ + SS+ SD+DE + D DS
Sbjct: 40 MNSLSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSR--- 96
Query: 61 NSGQQRESFDRPLE-NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGT 112
R LE +DP G+ +AI+ G+VGQ PVQK L++GRTVT+F++GT
Sbjct: 97 ----------RELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGT 146
Query: 113 GGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKV 172
GG+ + R + + P QWHR++++ ++LG ++ LV S +YVEG++E +V
Sbjct: 147 GGMFDQRVVGDADLPK------PAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRV 200
Query: 173 FNDPITGLVRRIREIAIRRNG 193
+ND I V+ I EI +RR+G
Sbjct: 201 YNDSINDQVKNIPEICLRRDG 221
>gi|116784739|gb|ABK23454.1| unknown [Picea sitchensis]
gi|224286177|gb|ACN40799.1| unknown [Picea sitchensis]
Length = 207
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 85/125 (68%), Gaps = 13/125 (10%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GRTVT+F++GT G+ + R +++
Sbjct: 64 GVDPKKGWGFRGVHKAIICGKVGQTPVQKILRNGRTVTIFTVGTAGMFDQRTAGMDKSTR 123
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
+QWHR++V+ E LG V++ L+ +++YVEG++E +V+ND I G V+ + EI
Sbjct: 124 ------PIQWHRIAVHNEPLGAYVVQQLIKDASVYVEGDIETRVYNDNINGTVKHVPEIC 177
Query: 189 IRRNG 193
+RR+G
Sbjct: 178 VRRDG 182
>gi|224125080|ref|XP_002319495.1| predicted protein [Populus trichocarpa]
gi|222857871|gb|EEE95418.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 83/125 (66%), Gaps = 13/125 (10%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ +AI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + P
Sbjct: 72 GVDPRKGWEFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIIGSKDLPK 131
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
QWHR++V+ + LG ++ L S++YVEG++E +V+ND I+G V+ I EI
Sbjct: 132 ------PAQWHRIAVHNDSLGAYAVQQLAKNSSVYVEGDIEIRVYNDSISGEVKNIPEIC 185
Query: 189 IRRNG 193
+RR+G
Sbjct: 186 VRRDG 190
>gi|124359154|gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
Length = 216
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 24/151 (15%)
Query: 61 NSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQSPVQKKLKSG 102
N+G +E D ++ G+DP G+ KAI+ G+VGQ+PVQK L++G
Sbjct: 44 NNGLNKEELDDEFDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNG 103
Query: 103 RTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTI 162
+ VT+F++GTGG+ + R + P QWHR++V+ E LG ++ L S++
Sbjct: 104 KNVTIFTVGTGGMYDQRIVGSKDLPK------PAQWHRIAVHNEVLGAYAVQQLFKNSSV 157
Query: 163 YVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
YVEG +E +V+ND I G V+ I EI +RR+G
Sbjct: 158 YVEGEIETRVYNDSINGEVKSIPEICVRRDG 188
>gi|357133060|ref|XP_003568146.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 77/114 (67%), Gaps = 6/114 (5%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ +AIL G+VGQ PVQK L++GRT+T+F++GTGG+ + R + P QWH
Sbjct: 74 GVHRAILCGKVGQVPVQKILRNGRTITVFTIGTGGMFDQRVVESADVPK------PAQWH 127
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
R++V+ E+LG ++ LV S +Y+EG++E +V+ND I V+ I EI IRR+G
Sbjct: 128 RIAVHNEQLGAYAVQKLVKNSAVYIEGDIETRVYNDSINDQVKNIPEICIRRDG 181
>gi|225450667|ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera]
gi|296089740|emb|CBI39559.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 86/125 (68%), Gaps = 14/125 (11%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + ++
Sbjct: 66 GVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQR--IGGKDLP 123
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
+ A QWHR++V+ E LG ++ LV S++YVEG++E +V+ND I G V+ + EI
Sbjct: 124 KPA-----QWHRIAVHNEPLGAYAVQQLVKNSSVYVEGDIEVRVYNDSINGEVKHVPEIC 178
Query: 189 IRRNG 193
IRR+G
Sbjct: 179 IRRDG 183
>gi|357441825|ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355480238|gb|AES61441.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|388493454|gb|AFK34793.1| unknown [Medicago truncatula]
Length = 212
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 24/151 (15%)
Query: 61 NSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQSPVQKKLKSG 102
N+G +E D ++ G+DP G+ KAI+ G+VGQ+PVQK L++G
Sbjct: 44 NNGLNKEELDDEFDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNG 103
Query: 103 RTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTI 162
+ VT+F++GTGG+ + R + P QWHR++V+ E LG ++ L S++
Sbjct: 104 KNVTIFTVGTGGMYDQRIVGSKDLPK------PAQWHRIAVHNEVLGAYAVQQLFKNSSV 157
Query: 163 YVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
YVEG +E +V+ND I G V+ I EI +RR+G
Sbjct: 158 YVEGEIETRVYNDSINGEVKSIPEICVRRDG 188
>gi|356535041|ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 217
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 29/160 (18%)
Query: 52 PLPDSSPTQNSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQS 93
PLPD N ++E+ D ++ G+DP G+ KAI+ G+VGQ+
Sbjct: 45 PLPD-----NDAPKKEALDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQA 99
Query: 94 PVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVM 153
PVQK L++GR +T+F++GTGG+ + R + P QWHR++V+ + LG +
Sbjct: 100 PVQKILRNGRNITIFTVGTGGMFDQRIQGPKDLPK------PAQWHRIAVHNDILGTYAV 153
Query: 154 KHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
+ L S++YVEG++E +V+ND I G V+ I EI +RR+G
Sbjct: 154 QQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDG 193
>gi|222628688|gb|EEE60820.1| hypothetical protein OsJ_14429 [Oryza sativa Japonica Group]
Length = 245
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 21/178 (11%)
Query: 16 PKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLEN 75
P+ ++ K + S ++S++ SD+DE + G + F +
Sbjct: 65 PRTAKKLKFYRKSQAWNSTASF-SDVDEK--------------NRKGGDAEDDFTHSRPD 109
Query: 76 GLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCA 135
+ G+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R P
Sbjct: 110 HVFRGVHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRTVGAENLPM------P 163
Query: 136 VQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
QWHR+SV+ E+LG ++ LV S +YVEG++E +V+ND I V+ I EI +RR+G
Sbjct: 164 AQWHRISVHNEQLGAFAVQKLVKNSAVYVEGDIETRVYNDRINDQVKNIPEICVRRDG 221
>gi|30681642|ref|NP_192844.2| Single-stranded DNA-binding protein [Arabidopsis thaliana]
gi|38258307|sp|Q84J78.1|SSB_ARATH RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Flags: Precursor
gi|28393531|gb|AAO42186.1| unknown protein [Arabidopsis thaliana]
gi|28827408|gb|AAO50548.1| unknown protein [Arabidopsis thaliana]
gi|34556071|emb|CAE46651.1| single-stranded DNA binding protein [Arabidopsis thaliana]
gi|332657567|gb|AEE82967.1| Single-stranded DNA-binding protein [Arabidopsis thaliana]
Length = 201
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 82/126 (65%), Gaps = 13/126 (10%)
Query: 75 NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENP 127
+G+DP G+ +AI+ G+VGQ+P+QK L++GRTVT+F++GTGG+ + R P
Sbjct: 58 HGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQP 117
Query: 128 TEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI
Sbjct: 118 K------PAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 171
Query: 188 AIRRNG 193
+RR+G
Sbjct: 172 CVRRDG 177
>gi|297813577|ref|XP_002874672.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
gi|297320509|gb|EFH50931.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 201
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 82/126 (65%), Gaps = 13/126 (10%)
Query: 75 NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENP 127
+G+DP G+ +AI+ G+VGQ+P+QK L++GRTVT+F++GTGG+ + R P
Sbjct: 58 HGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQP 117
Query: 128 TEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI
Sbjct: 118 K------PAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 171
Query: 188 AIRRNG 193
+RR+G
Sbjct: 172 CVRRDG 177
>gi|351727395|ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycine max]
gi|255627623|gb|ACU14156.1| unknown [Glycine max]
Length = 236
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 13/130 (10%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GR +T+F++GTGG+ + R + P
Sbjct: 74 GVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGGMFDQRIQGPKDLPK 133
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
QWHR++V+ + LG ++ L S++YVEG++E +V+ND I G V+ I EI
Sbjct: 134 ------PAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGEVKSIPEIC 187
Query: 189 IRRNGTYLIF 198
+RR+G +
Sbjct: 188 VRRDGKICLI 197
>gi|413945984|gb|AFW78633.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 223
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 19/173 (10%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
++V+ + L ++ LV S +YVEG++E +V+ND + V+ I EI +RR+G
Sbjct: 130 IAVHNDYLSAYAVQKLVKNSAVYVEGDIETRVYNDSVNDQVKNIPEICVRRDG 182
>gi|388505152|gb|AFK40642.1| unknown [Lotus japonicus]
Length = 220
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 24/157 (15%)
Query: 55 DSSPTQNSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQSPVQ 96
D N G E D +++ G+DP G+ KAI+ G+VGQ+PVQ
Sbjct: 46 DQPSRGNGGLNNEELDEEIDDFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQ 105
Query: 97 KKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHL 156
K L++G+ VT+F++GTGG+ + R + P QWHR++V+ + LG ++ +
Sbjct: 106 KILRNGKNVTIFTVGTGGMSDQRIVGARDMPK------PPQWHRIAVHNDVLGAYAVQQI 159
Query: 157 VPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
S++YVEG++E +V+ND I G V+ I EI +RR+G
Sbjct: 160 CKNSSVYVEGDIETRVYNDSINGEVKSIPEICVRRDG 196
>gi|238006070|gb|ACR34070.1| unknown [Zea mays]
gi|238006582|gb|ACR34326.1| unknown [Zea mays]
gi|413945982|gb|AFW78631.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
gi|413945983|gb|AFW78632.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 206
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 19/173 (10%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
++V+ + L ++ LV S +YVEG++E +V+ND + V+ I EI +RR+G
Sbjct: 130 IAVHNDYLSAYAVQKLVKNSAVYVEGDIETRVYNDSVNDQVKNIPEICVRRDG 182
>gi|115457904|ref|NP_001052552.1| Os04g0363700 [Oryza sativa Japonica Group]
gi|113564123|dbj|BAF14466.1| Os04g0363700, partial [Oryza sativa Japonica Group]
Length = 111
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R P QWHR+SV
Sbjct: 1 AIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRTVGAENLPM------PAQWHRISV 54
Query: 144 YPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTY 195
+ E+LG ++ LV S +YVEG++E +V+ND I V+ I EI +RR+G Y
Sbjct: 55 HNEQLGAFAVQKLVKNSAVYVEGDIETRVYNDRINDQVKNIPEICVRRDGMY 106
>gi|357136675|ref|XP_003569929.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 151
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ +AI+ G VGQ PVQK L++G TVT+F++GTGG+ + RR P QWH
Sbjct: 20 GVHRAIICGNVGQVPVQKILRNGHTVTVFTVGTGGMFDQRRVGAENLPV------PAQWH 73
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
R++V+ E LG ++ LV + +YVEG++E +V+ND I ++ I EI +RR+G
Sbjct: 74 RIAVHNEHLGTYAVQKLVKNAAVYVEGDIETRVYNDRINNQLKNIPEICVRRDG 127
>gi|302773852|ref|XP_002970343.1| hypothetical protein SELMODRAFT_411277 [Selaginella moellendorffii]
gi|300161859|gb|EFJ28473.1| hypothetical protein SELMODRAFT_411277 [Selaginella moellendorffii]
Length = 192
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G++KA++VG++ Q P + LK+G + + TGG+R ++ PT+ Q H
Sbjct: 65 GVYKAVIVGELTQPPAELVLKNGNAIVTLMVATGGLRVQKKL---NAPTK-------QIH 114
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
+V VY RL + + G IY+EGN+E +VFNDP+TG V+ REI++R+NG +
Sbjct: 115 KVVVYHRRLKDLAT-QIKKGQQIYLEGNMESRVFNDPVTGAVKLSREISVRQNGRLFML 172
>gi|302769376|ref|XP_002968107.1| hypothetical protein SELMODRAFT_440287 [Selaginella moellendorffii]
gi|300163751|gb|EFJ30361.1| hypothetical protein SELMODRAFT_440287 [Selaginella moellendorffii]
Length = 192
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G++KA++VG++ Q P + LK+G + + TGG+R ++ PT+ Q H
Sbjct: 65 GVYKAVIVGELTQPPAELVLKNGNAIVTLMVATGGLRVQKKL---NAPTK-------QIH 114
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
+V VY RL + + G IY+EGN+E +VFNDP+TG V+ REI++R+NG +
Sbjct: 115 KVVVYHRRLKDLAT-QIKKGQQIYLEGNMESRVFNDPVTGAVKLSREISVRQNGRLFML 172
>gi|194694908|gb|ACF81538.1| unknown [Zea mays]
gi|413945980|gb|AFW78629.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
gi|413945981|gb|AFW78630.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 189
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 36/173 (20%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
++V+ + L ++ LV K ND V+ I EI +RR+G
Sbjct: 130 IAVHNDYLSAYAVQKLV-------------KNVNDQ----VKNIPEICVRRDG 165
>gi|238006822|gb|ACR34446.1| unknown [Zea mays]
gi|413945979|gb|AFW78628.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 151
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLV 157
++V+ + L ++ LV
Sbjct: 130 IAVHNDYLSAYAVQKLV 146
>gi|3600051|gb|AAC35538.1| contains similarity to the single-strand binding proteins family
(Pfam: SSB.hmm, score: 24.02) [Arabidopsis thaliana]
Length = 150
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI +RR+G Y+
Sbjct: 17 QWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGMYV 76
>gi|227206178|dbj|BAH57144.1| AT4G11060 [Arabidopsis thaliana]
Length = 97
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI +RR+G
Sbjct: 17 QWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDG 73
>gi|217978382|ref|YP_002362529.1| single-strand binding protein [Methylocella silvestris BL2]
gi|217503758|gb|ACK51167.1| single-strand binding protein [Methylocella silvestris BL2]
Length = 168
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P +++ SG V FSL T ++ E ++ TE WH
Sbjct: 5 VNKVILIGNLGRDPETRRMNSGDAVVSFSLATTDSWRDKATGERKDRTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
+ ++ E LG + ++ GS +YVEG L+ + + D G R++ EI ++R
Sbjct: 57 IVIFNENLGKIADQYCKKGSKVYVEGQLQTREYTDK-DGNQRKVTEIVLQR 106
>gi|146329809|ref|YP_001209056.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
gi|146233279|gb|ABQ14257.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
Length = 169
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VGQ+P + + +G V FSL T N+R+ E TE WH
Sbjct: 3 GVNKVILVGNVGQNPDVRVMTNGEQVANFSLATSMNWNDRQTGEKREKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R Y RL ++ +++ GS +Y+EG LE + + D G+ R EI +
Sbjct: 55 RCVAY-RRLAEIIGQYVRKGSKLYIEGRLETRKWQDQ-NGIDRYTTEIIV 102
>gi|406706227|ref|YP_006756580.1| single stranded DNA-binding protein [alpha proteobacterium HIMB5]
gi|406652003|gb|AFS47403.1| single stranded DNA-binding protein [alpha proteobacterium HIMB5]
Length = 152
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHRV
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKNTGEKKEKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ E L VV ++L G+ IYVEG L + + D +G + EI I+
Sbjct: 59 VFNEGLVNVVQQYLKKGAQIYVEGQLTTRKWKDEQSGQDKYSTEIVIQ 106
>gi|354595425|ref|ZP_09013453.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
gi|353671192|gb|EHD12903.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
Length = 161
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + G + +L T N+++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRTTDQGTKIVNLTLATSETWNDKQTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ ERL V K+L G I+VEG L+ + +ND G+ R + E+ + R L+
Sbjct: 57 VVVFNERLADVAEKYLRKGRKIFVEGVLKTRKWNDS-QGVERYVTEVVLDRFRGELVLL 114
>gi|146329431|ref|YP_001209671.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
gi|146232901|gb|ABQ13879.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
Length = 151
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G VG+ P + + +G V FSL T N+R+ E TE W
Sbjct: 2 AGINKVILIGNVGKDPDMRVMTNGEQVANFSLATSMSWNDRQSGEKREKTE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
HR Y R+ ++ +++ GS +Y+EG LE + + D +G+ R EI +
Sbjct: 54 HRCVAY-RRIAEIIGQYVRKGSKLYIEGRLETRKWQDQ-SGVERYTTEIIV 102
>gi|118602520|ref|YP_903735.1| single-strand binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567459|gb|ABL02264.1| single-strand binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 163
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ K +G+ VT S+ T ++ + + TE WH
Sbjct: 3 GINKVILVGNLGQDVELKYTSNGKAVTTLSVATSESWTDKNTGQKVDKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ +L + ++L GS +YVEGNL + + D TG R EI + NGT +
Sbjct: 55 RVSLFG-KLAEIASQYLHKGSKVYVEGNLRTRKWQDQ-TGTNRYTTEIVVGFNGTLQML 111
>gi|410945525|ref|ZP_11377266.1| ssDNA-binding protein [Gluconobacter frateurii NBRC 101659]
Length = 164
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG V FSL T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKVVSFSLATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ ERLG V + L G +Y+EG L + + D
Sbjct: 57 VVIFNERLGDVADRFLRKGRKVYLEGELRTRKWTD 91
>gi|400288810|ref|ZP_10790842.1| single-strand binding protein [Psychrobacter sp. PAMC 21119]
Length = 207
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E + TE WH
Sbjct: 3 GVNKVIIIGNLGADPEARQFSNGGSVTNISVATSEQWTDKQSGEKKEATE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + DP G R I EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|71066238|ref|YP_264965.1| single-strand binding protein [Psychrobacter arcticus 273-4]
gi|71039223|gb|AAZ19531.1| single-strand binding protein [Psychrobacter arcticus 273-4]
Length = 213
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GVNKVIIIGNLGADPEARQFNNGGSVTNISVATSEQWTDKQSGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + DP G R I EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|449016618|dbj|BAM80020.1| single strand binding protein, SSB [Cyanidioschyzon merolae strain
10D]
Length = 238
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKS-GRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
+ + +LVG VG+ PV ++L + G TVTLF L T E + +++ QWH
Sbjct: 72 VNRVLLVGHVGRDPVTRQLTADGSTVTLFPLAT---------KEFTSSQNASSQVLTQWH 122
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGTYLIF 198
+++Y +LG ++ G +YVEG L+ + + D G+VR E+A+ G+ LI
Sbjct: 123 NIAIYDSKLGEIIQNACRKGYQVYVEGRLQSRQWTDA-KGVVRTHFEVAVSPFKGSVLIL 181
>gi|93006782|ref|YP_581219.1| single-strand binding protein [Psychrobacter cryohalolentis K5]
gi|92394460|gb|ABE75735.1| single-strand binding protein [Psychrobacter cryohalolentis K5]
Length = 219
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GVNKVIIIGNLGADPEARQFNNGGSVTNISVATSEQWTDKQSGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + DP G R I EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|68075493|ref|XP_679665.1| single-strand binding protein [Plasmodium berghei strain ANKA]
gi|56500463|emb|CAH94310.1| single-strand binding protein, putative [Plasmodium berghei]
Length = 276
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 70 DRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTE 129
+RP+ N + + K L+G+VG P K L G V FSL T +R E ++ T+
Sbjct: 68 NRPVMN--EKSLNKITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNSNELKSKTD 125
Query: 130 YANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIA 188
WHR+ VY + + ++ K+L G +Y++G+L +K F + + R+I EI
Sbjct: 126 --------WHRIVVYDQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNDLNNQPRQITEIV 177
Query: 189 IRRNGTYLIFF 199
+ N LIF
Sbjct: 178 LSYNKGDLIFL 188
>gi|347761666|ref|YP_004869227.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
gi|347580636|dbj|BAK84857.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
Length = 189
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ ERLG V + L G +Y+EG+L+ + + D +G R E+ + R L+
Sbjct: 57 VVIFNERLGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDRFRGELVLL 114
>gi|421852986|ref|ZP_16285668.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371478837|dbj|GAB30871.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 185
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + FSL T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ ERL V + L G +Y+EG+L+ + + D G R E+ I R
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDR 106
>gi|386081060|ref|YP_005994585.1| single-stranded DNA-binding protein [Pantoea ananatis PA13]
gi|354990241|gb|AER34365.1| single-stranded DNA-binding protein [Pantoea ananatis PA13]
Length = 184
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + G+ VT SL T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPGGKAVTGLSLATSETWRDKQTGENREITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + NGT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLKTRKWEDN-AGITRYTTEVIVGINGTMQML 113
>gi|258543617|ref|YP_003189050.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01]
gi|384043535|ref|YP_005482279.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|384052052|ref|YP_005479115.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|384055161|ref|YP_005488255.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|384058394|ref|YP_005491061.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|384061035|ref|YP_005500163.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|384064327|ref|YP_005484969.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|384120340|ref|YP_005502964.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421850857|ref|ZP_16283800.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
NBRC 101655]
gi|256634695|dbj|BAI00671.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01]
gi|256637751|dbj|BAI03720.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-03]
gi|256640805|dbj|BAI06767.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-07]
gi|256643860|dbj|BAI09815.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-22]
gi|256646915|dbj|BAI12863.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-26]
gi|256649968|dbj|BAI15909.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-32]
gi|256652958|dbj|BAI18892.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656012|dbj|BAI21939.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-12]
gi|371458321|dbj|GAB29003.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
NBRC 101655]
Length = 186
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + FSL T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ ERL V + L G +Y+EG+L+ + + D G R E+ I R
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDR 106
>gi|254456392|ref|ZP_05069821.1| single-strand binding protein family protein [Candidatus
Pelagibacter sp. HTCC7211]
gi|207083394|gb|EDZ60820.1| single-strand binding protein family protein [Candidatus
Pelagibacter sp. HTCC7211]
Length = 150
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHR+
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKNTGEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+ E L V+ ++L G+ IYVEG L + + D +G + EI ++ T L
Sbjct: 59 VFNEGLVNVIQQYLKKGAQIYVEGQLTTRKWKDEQSGQDKYSTEIVLQGYNTTLTML 115
>gi|323143333|ref|ZP_08078022.1| single-strand binding family protein [Succinatimonas hippei YIT
12066]
gi|322416905|gb|EFY07550.1| single-strand binding family protein [Succinatimonas hippei YIT
12066]
Length = 231
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P+ + SG +VT S+ T +R N ++ TEYA +WH
Sbjct: 4 GVNKVILIGNLGDEPLCRTTHSGCSVTNISMVTNEVRRN---IDTGETTEYA-----EWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV ++ +L + ++L GS IYVEG L + F D G R + EI
Sbjct: 56 RVVMW-GKLADIAKQYLHKGSQIYVEGKLRTRSFMDK-QGQKRSVTEI 101
>gi|329113793|ref|ZP_08242564.1| Single-stranded DNA-binding protein [Acetobacter pomorum DM001]
gi|326696803|gb|EGE48473.1| Single-stranded DNA-binding protein [Acetobacter pomorum DM001]
Length = 188
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + FSL T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ ERL V + L G +Y+EG+L+ + + D G R E+ I R
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDR 106
>gi|182679033|ref|YP_001833179.1| single-strand binding protein [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634916|gb|ACB95690.1| single-strand binding protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 180
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P +++ SG V FSL T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGRDPEVRRMNSGEAVVSFSLATTESWRDKMSGERRDRTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E LG + ++ GS +Y+EG L+ + + D G RR E+ ++R
Sbjct: 57 VVIFNENLGKIAEQYCKKGSKVYLEGQLQTREYQDR-DGNQRRTTEVVLQR 106
>gi|212550688|ref|YP_002309005.1| single-strand DNA-binding protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548926|dbj|BAG83594.1| single-strand DNA-binding protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 152
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG VG+ P + GR V FSL T N + N + +R +WH V
Sbjct: 5 KVILVGNVGKDPETRYFDDGRGVANFSLAT-----NEKGYTTANGIQIPDRT--EWHNVV 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V+ + L G+V K++ GS IY+EG + + ++D G+ R I EI +
Sbjct: 58 VWRKGLVGIVEKYVHKGSKIYIEGKIRTRSYDDG-QGVKRYITEIYV 103
>gi|354593813|ref|ZP_09011856.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
gi|353672924|gb|EHD14620.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
Length = 174
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G V +L T N+R+ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPDVRTTQMGTKVVNLTLATSDTWNDRQTGERKENTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ ERL V K+L G +++EG L+ + + D G+ R E+ + R L+
Sbjct: 57 VVIFNERLADVAEKYLRKGRKVFIEGQLKTRKWTDQ-QGMERYTTEVVVDRFRGELVLL 114
>gi|70952901|ref|XP_745587.1| single-strand binding protein [Plasmodium chabaudi chabaudi]
gi|56525957|emb|CAH81753.1| single-strand binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 275
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G+VG P K L G V FSL T +R E ++ T+ WHRV
Sbjct: 79 KITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRVV 130
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
VY + + ++ K+L G +Y++G+L +K F + + R+I EI + N LIF
Sbjct: 131 VYDQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNELNNQPRQITEIVLSYNKGDLIFL 188
>gi|27904962|ref|NP_778088.1| single-strand binding protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|32699636|sp|Q89A53.1|SSB_BUCBP RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|27904360|gb|AAO27193.1| single-strand binding protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 166
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + +++G VT +L T ++ E + TE WH
Sbjct: 5 GINKVILIGYLGQDPDVRYMQNGSAVTNITLATSETWKDKNNGEIKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
R+ V+ +L + ++L GS +Y+EG+L+ + + D G+ R I EI + GT
Sbjct: 57 RI-VFFNKLAEIAGEYLKKGSQVYIEGSLQTRKWKDQ-NGIERYITEIIVSVGGT 109
>gi|406708110|ref|YP_006758462.1| single stranded DNA-binding protein [alpha proteobacterium HIMB59]
gi|406653886|gb|AFS49285.1| single stranded DNA-binding protein [alpha proteobacterium HIMB59]
Length = 155
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +G + FS+ T N+ + E+ TE WHR
Sbjct: 5 VNKVILLGNLGKDPDIRATSAGSRLASFSIATSTKYRNKETQQLEDKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V V+ ++L V K+L GS +YVEG L+ + + D G+ + E+ I
Sbjct: 57 VVVFNDKLADVCEKYLRKGSKVYVEGQLQTRKWTDN-NGVDKYTTEVVI 104
>gi|296447169|ref|ZP_06889100.1| single-strand binding protein [Methylosinus trichosporium OB3b]
gi|296255334|gb|EFH02430.1| single-strand binding protein [Methylosinus trichosporium OB3b]
Length = 178
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + L SG V FS+ T +R E TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTLPSGDRVVSFSVATSESWRDRNTGERRERTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
VS++ E L + ++ GS IY+EG L+ + + D G+ RR ++ ++R
Sbjct: 57 VSIFNENLAKIAEQYCRKGSKIYLEGQLQTREYQDK-DGIQRRATDVVLQR 106
>gi|32491249|ref|NP_871503.1| hypothetical protein WGLp500 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166456|dbj|BAC24646.1| ssb [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 167
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G +T SL T ++ E++ TE WH
Sbjct: 9 GINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTE--------WH 60
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EGNL+ + + D G R I EI + NG
Sbjct: 61 RVILFG-KLAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGC 113
>gi|37525024|ref|NP_928368.1| hypothetical protein plu1039 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784450|emb|CAE13334.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 154
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G++GQ P + G TV + SL T +R+ E + TE WH
Sbjct: 5 GVNKVILIGRLGQEPEVRYRPEGDTVAVLSLATSETWRDRQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L + + D +G R E+ + + GT +
Sbjct: 57 RVVIFG-KLAEIAGEYLKKGSQVYIEGQLRTRKWFDKASGQDRYSTEVVLNQQGTMQML 114
>gi|349699617|ref|ZP_08901246.1| single-strand DNA-binding protein Ssb [Gluconacetobacter europaeus
LMG 18494]
Length = 179
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ ER+G V + L G +Y+EG+L+ + + D +G R E+ + R
Sbjct: 57 VVIFNERIGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDR 106
>gi|349686620|ref|ZP_08897762.1| single-strand DNA-binding protein Ssb [Gluconacetobacter oboediens
174Bp2]
Length = 185
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ ER+G V + L G +Y+EG+L+ + + D +G R E+ + R
Sbjct: 57 VVIFNERIGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDR 106
>gi|37999428|sp|Q8D254.2|SSB_WIGBR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
Length = 163
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G +T SL T ++ E++ TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EGNL+ + + D G R I EI + NG
Sbjct: 57 RVILFG-KLAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGC 109
>gi|221057181|ref|XP_002259728.1| single-strand binding protein [Plasmodium knowlesi strain H]
gi|193809800|emb|CAQ40504.1| single-strand binding protein, putative [Plasmodium knowlesi strain
H]
Length = 280
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 63 GQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPL 122
G +R +RP+ + + K L+G+VG P K L G V FSL T +R
Sbjct: 61 GSKRYYNNRPMTG--EKSLNKISLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTN 118
Query: 123 ENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLV 181
E ++ T+ WHR+ VY + + +V K L G +Y++G+L ++ F + +T
Sbjct: 119 ELKSKTD--------WHRIVVYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQP 170
Query: 182 RRIREIAIRRNGTYLIFF 199
R+I E+ + N LIF
Sbjct: 171 RQITEVVLSYNKGDLIFL 188
>gi|82595019|ref|XP_725672.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23480763|gb|EAA17237.1| SINGLE-STRAND BINDING PROTEIN [Plasmodium yoelii yoelii]
Length = 274
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 77 KITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNSNELKSKTD--------WHRIV 128
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
VY + + ++ K+L G +Y++G+L +K F + + R+I EI + N LIF
Sbjct: 129 VYDQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNDLNNQPRQITEIVLSYNKGDLIFL 186
>gi|91204976|ref|YP_537331.1| single-stranded DNA-binding protein [Rickettsia bellii RML369-C]
gi|157827694|ref|YP_001496758.1| single-stranded DNA-binding protein [Rickettsia bellii OSU 85-389]
gi|123084592|sp|Q1RK72.1|SSB_RICBR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|91068520|gb|ABE04242.1| Single-stranded DNA-binding protein [Rickettsia bellii RML369-C]
gi|157802998|gb|ABV79721.1| single-strand DNA-binding protein [Rickettsia bellii OSU 85-389]
Length = 150
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G +G+ P + G+ + SL T I +R E + TE WHRV
Sbjct: 7 KVTLIGNLGRDPEIRTTGEGKEIANLSLATTDIWKDRVTGEKKEKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV ++ GS +Y+EG+L+ + +ND +G+ + EI ++ + LI
Sbjct: 59 IFNEGLVSVVKNYVKKGSKLYIEGSLQTRKWNDS-SGVEKYTTEIVLQNFNSQLILL 114
>gi|254293783|ref|YP_003059806.1| single-strand binding protein [Hirschia baltica ATCC 49814]
gi|254042314|gb|ACT59109.1| single-strand binding protein [Hirschia baltica ATCC 49814]
Length = 158
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ +G +V F++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRQFPNGGSVASFTVATSESWKDRNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+V+ E L +V +++ GS +Y+EG LE + + D G + E+ +R G+ L
Sbjct: 57 VAVFSEGLVKIVERYVKKGSKVYIEGQLETRKWTDN-QGQEKYTTEVVLRNFGSTLTML 114
>gi|339319831|ref|YP_004679526.1| single-strand DNA-binding protein [Candidatus Midichloria
mitochondrii IricVA]
gi|338225956|gb|AEI88840.1| single-strand DNA-binding protein [Candidatus Midichloria
mitochondrii IricVA]
Length = 155
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + + GR + FSL T ++ E + V+WH+V
Sbjct: 7 KVILIGNVGRDPEIRTTQDGREIASFSLATSDAWRDKGSGEK--------KEKVEWHKVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
++ L GVV ++ GS IY+EG+L+ + + DP G+ + E+ ++
Sbjct: 59 IFQPHLVGVVRNYVHKGSKIYLEGSLQTRKWTDP-NGVEKYTTEVILQ 105
>gi|291241617|ref|XP_002740707.1| PREDICTED: single-stranded DNA binding protein 1-like [Saccoglossus
kowalevskii]
Length = 164
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 44 SAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGR 103
SAI+ PL S T + Q R + + K LVG+ G+ +K L+SGR
Sbjct: 4 SAINRLMPPLVRSCTTSSEAQIRR---------FEKCVNKVTLVGRAGRGAEEKGLESGR 54
Query: 104 TVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV-YPERLGGVVMKHLVPGSTI 162
V F+L T + + R ++ EY R QWHR+SV Y L V+K++ GS +
Sbjct: 55 PVVQFTLATSDVYKDNR---TDHEGEY--REKTQWHRISVFYSPALRETVLKYVKKGSRL 109
Query: 163 YVEGNLE 169
Y+ G LE
Sbjct: 110 YITGKLE 116
>gi|341584444|ref|YP_004764935.1| single-stranded DNA-binding protein [Rickettsia heilongjiangensis
054]
gi|350273968|ref|YP_004885281.1| single-strand DNA-binding protein [Rickettsia japonica YH]
gi|383482746|ref|YP_005391660.1| single-stranded DNA-binding protein [Rickettsia montanensis str.
OSU 85-930]
gi|340808669|gb|AEK75257.1| single-stranded DNA-binding protein [Rickettsia heilongjiangensis
054]
gi|348593181|dbj|BAK97142.1| single-strand DNA-binding protein [Rickettsia japonica YH]
gi|378935100|gb|AFC73601.1| single-stranded DNA-binding protein [Rickettsia montanensis str.
OSU 85-930]
Length = 152
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|350563309|ref|ZP_08932131.1| single-strand binding protein [Thioalkalimicrobium aerophilum AL3]
gi|349779173|gb|EGZ33520.1| single-strand binding protein [Thioalkalimicrobium aerophilum AL3]
Length = 186
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + +G + S+ T N+R E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPEVRYAANGNAIANLSVATSEQWNDRATGERQERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
RV ++ +L + ++L GS +Y+EG L+ + + D TG + EI I + G +
Sbjct: 55 RVVIFG-KLAEIAQQYLTKGSQVYLEGKLQTRKWQDQATGQDKYSTEIVIDQGGGVM 110
>gi|34581111|ref|ZP_00142591.1| single-strand binding protein [Rickettsia sibirica 246]
gi|28262496|gb|EAA26000.1| single-strand binding protein [Rickettsia sibirica 246]
Length = 152
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|410944285|ref|ZP_11376026.1| single-strand DNA binding protein [Gluconobacter frateurii NBRC
101659]
Length = 188
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+R+ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKIVNLTIATSETWNDRQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ +RLG V + L G +Y+EG L + + D +G R E+ I R
Sbjct: 57 VVIFNDRLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDR 106
>gi|15893218|ref|NP_360932.1| single-stranded DNA-binding protein [Rickettsia conorii str. Malish
7]
gi|165933856|ref|YP_001650645.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Iowa]
gi|229587202|ref|YP_002845703.1| single-stranded DNA-binding protein [Rickettsia africae ESF-5]
gi|238650832|ref|YP_002916687.1| single-strand DNA-binding protein [Rickettsia peacockii str.
Rustic]
gi|374319815|ref|YP_005066314.1| ssDNA-binding protein [Rickettsia slovaca 13-B]
gi|378721940|ref|YP_005286827.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Colombia]
gi|378723284|ref|YP_005288170.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Arizona]
gi|378724638|ref|YP_005289522.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hauke]
gi|379017145|ref|YP_005293380.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Brazil]
gi|379018423|ref|YP_005294658.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hino]
gi|379019737|ref|YP_005295971.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hlp#2]
gi|379713009|ref|YP_005301348.1| single-stranded DNA-binding protein [Rickettsia philipii str. 364D]
gi|383484588|ref|YP_005393501.1| single-stranded DNA-binding protein [Rickettsia parkeri str.
Portsmouth]
gi|383751907|ref|YP_005427008.1| single-stranded DNA-binding protein [Rickettsia slovaca str.
D-CWPP]
gi|37999453|sp|Q92G30.1|SSB_RICCN RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|15620434|gb|AAL03833.1| single-strand binding protein [Rickettsia conorii str. Malish 7]
gi|165908943|gb|ABY73239.1| single-strand DNA binding protein [Rickettsia rickettsii str. Iowa]
gi|228022252|gb|ACP53960.1| Single-stranded DNA-binding protein [Rickettsia africae ESF-5]
gi|238624930|gb|ACR47636.1| single-strand DNA-binding protein [Rickettsia peacockii str.
Rustic]
gi|360042364|gb|AEV92746.1| Single-stranded DNA-binding protein [Rickettsia slovaca 13-B]
gi|376325669|gb|AFB22909.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Brazil]
gi|376326964|gb|AFB24203.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Colombia]
gi|376328308|gb|AFB25546.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Arizona]
gi|376329654|gb|AFB26891.1| single-stranded DNA-binding protein [Rickettsia philipii str. 364D]
gi|376330989|gb|AFB28225.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hino]
gi|376332317|gb|AFB29551.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hlp#2]
gi|376333653|gb|AFB30886.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hauke]
gi|378936942|gb|AFC75442.1| single-stranded DNA-binding protein [Rickettsia parkeri str.
Portsmouth]
gi|379774921|gb|AFD20277.1| single-stranded DNA-binding protein [Rickettsia slovaca str.
D-CWPP]
Length = 152
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|330993202|ref|ZP_08317139.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
gi|329759753|gb|EGG76260.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
Length = 184
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRNSQNGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ ERLG V + L G +Y+EG+L+ + + D +G R E+ + R L+
Sbjct: 57 VVIFNERLGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDRFRGELVLL 114
>gi|119502955|ref|ZP_01625040.1| single-stranded DNA-binding protein [marine gamma proteobacterium
HTCC2080]
gi|119461301|gb|EAW42391.1| single-stranded DNA-binding protein [marine gamma proteobacterium
HTCC2080]
Length = 164
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P + ++G +T S+ T ++ + + TE WH
Sbjct: 5 GINKVILVGNLGSDPENRMSQAGAAITNLSIATSETWKDKNTGQQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ RL V ++L GS +YVEG L + + D TG R EI
Sbjct: 57 RV-VFFNRLAEVAAEYLRKGSKVYVEGTLRTRKWQDKQTGQDRYTTEI 103
>gi|157829131|ref|YP_001495373.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
'Sheila Smith']
gi|157801612|gb|ABV76865.1| single-strand DNA-binding protein [Rickettsia rickettsii str.
'Sheila Smith']
Length = 152
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|389584245|dbj|GAB66978.1| single-strand binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 279
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G+VG P K L G V FSL T +R E ++ T+ WHRV
Sbjct: 78 KIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRVV 129
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
VY + + +V K L G +Y++G+L ++ F + +T R+I E+ + N LIF
Sbjct: 130 VYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQPRQITEVVLSYNKGDLIFL 187
>gi|365855690|ref|ZP_09395732.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
gi|363718909|gb|EHM02231.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
Length = 172
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T EN E + +WH
Sbjct: 5 VNKVILVGNLGRDPEVRNFQNGGRVVNLRIAT---------TENYKDREGNRQEKTEWHS 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ ERLG + K+L GS +YVEG LE + + D G R E+ +R G L
Sbjct: 56 VAIFNERLGEIAEKYLRKGSKVYVEGKLETRKWQDQ-AGQDRYSTEVTLRNFGGELTLL 113
>gi|407781465|ref|ZP_11128683.1| single-strand binding protein [Oceanibaculum indicum P24]
gi|407207682|gb|EKE77613.1| single-strand binding protein [Oceanibaculum indicum P24]
Length = 170
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +++G+ V +L T +R+ E + TE WHR
Sbjct: 5 VNKVILIGNLGRDPEIRSMQNGQKVANLALATSESWRDRQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E L V K+L GS IY+EG+L+ + + D +G + EI ++R
Sbjct: 57 VVIFNENLIDVAEKYLRKGSKIYIEGSLQTRKWQDQ-SGQEKYTTEIVLQR 106
>gi|114327884|ref|YP_745041.1| single-strand DNA binding protein [Granulibacter bethesdensis
CGDNIH1]
gi|114316058|gb|ABI62118.1| single-strand DNA binding protein [Granulibacter bethesdensis
CGDNIH1]
Length = 173
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + + G V F+L T N+R E + TE WHR
Sbjct: 5 VNKVILIGNLGRDPEVRNTQDGGKVVNFTLATSETWNDRASGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V V+ +RL + ++L G+ +YVEG L+ + + D G + E+ I R
Sbjct: 57 VVVFNDRLADIAERYLRKGTKVYVEGALQTRKWTDQ-AGQEKYTTEVVISR 106
>gi|91763283|ref|ZP_01265247.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717696|gb|EAS84347.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1002]
Length = 152
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHR+
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKTTGEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ + L VV ++L G+ IYVEG + + + D +G + EI I+
Sbjct: 59 VFNDGLVNVVQQYLKKGAQIYVEGQIATRKWKDEQSGQDKYSTEIVIQ 106
>gi|453331705|dbj|GAC86619.1| single-strand DNA binding protein [Gluconobacter thailandicus NBRC
3255]
Length = 193
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+R+ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKIVNLTVATSETWNDRQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ +RLG V + L G +Y+EG L + + D +G R E+ I R
Sbjct: 57 VVIFNDRLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDR 106
>gi|296114888|ref|ZP_06833536.1| single-stranded DNA-binding protein [Gluconacetobacter hansenii
ATCC 23769]
gi|295978594|gb|EFG85324.1| single-stranded DNA-binding protein [Gluconacetobacter hansenii
ATCC 23769]
Length = 176
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRNSQNGAKIVSLTLATSETWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ ER+G V + L G +Y+EG L+ + + D +G+ R E+ I R L+
Sbjct: 57 VVIFNERIGDVAERFLRKGRKVYLEGTLQTRKWTDQ-SGMERYTTEVVIDRFRGELVLL 114
>gi|148261030|ref|YP_001235157.1| single-strand binding protein [Acidiphilium cryptum JF-5]
gi|146402711|gb|ABQ31238.1| single-strand binding protein [Acidiphilium cryptum JF-5]
Length = 161
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V + +RL V + L GS IY+EG L+ + + D +G + EI + R G L+
Sbjct: 57 VVIMNDRLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIGAELVLL 114
>gi|162148105|ref|YP_001602566.1| single-stranded DNA-binding protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786682|emb|CAP56265.1| Single-stranded DNA-binding protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 198
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 62 SGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRP 121
+GQQ++S + + K ILVG +G+ P + ++G + +L T N+R
Sbjct: 7 TGQQQDS-------SMAGSVNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRAS 59
Query: 122 LENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLV 181
E TE WHRV ++ ERL V + L G +Y+EG L+ + + D +G
Sbjct: 60 GERRERTE--------WHRVVIFNERLADVAERFLRKGRKVYLEGTLQTRKWTDQ-SGQE 110
Query: 182 RRIREIAIRRNGTYLIFF 199
R E+ I R L+
Sbjct: 111 RYTTEVVIDRFRGELVLL 128
>gi|339021196|ref|ZP_08645305.1| single-strand DNA binding protein Ssb [Acetobacter tropicalis NBRC
101654]
gi|338751681|dbj|GAA08609.1| single-strand DNA binding protein Ssb [Acetobacter tropicalis NBRC
101654]
Length = 186
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGMKIVSLTLATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ ERL V + L G +Y+EG L+ + + D +G R E+ + R L+
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGALQTRKWTDQ-SGQERYTTEVIVERFRGELVLL 114
>gi|148244617|ref|YP_001219311.1| single-strand DNA binding protein [Candidatus Vesicomyosocius
okutanii HA]
gi|146326444|dbj|BAF61587.1| single-strand DNA binding protein [Candidatus Vesicomyosocius
okutanii HA]
Length = 165
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VGQ+ K + GR+V S+ T N R ++ +N + +R +WH
Sbjct: 3 GINKVILIGNVGQNIELKYISDGRSVANLSVAT-----NERWID-KNTGQKVDRT--EWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGT 194
RVS++ +L + ++L GS IY+EG L+ + + D TG R EI + NGT
Sbjct: 55 RVSLFG-KLADIASQYLHKGSKIYIEGKLKTRKWQDK-TGTDRYTTEIVVSGLNGT 108
>gi|71083676|ref|YP_266396.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062789|gb|AAZ21792.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1062]
Length = 152
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHR+
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKTTGEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ + L VV ++L G+ IYVEG + + + D +G + EI I+
Sbjct: 59 VFNDGLVNVVQQYLKKGAQIYVEGQIATRKWKDEQSGQDKYSTEIVIQ 106
>gi|320540007|ref|ZP_08039664.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
gi|320029930|gb|EFW11952.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
Length = 162
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G VT SL T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVTGLSLATSESWRDKQTGENRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + NGT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDN-SGTDRWTTEVVVGINGTMQML 113
>gi|326404430|ref|YP_004284512.1| single-stranded DNA-binding protein [Acidiphilium multivorum
AIU301]
gi|325051292|dbj|BAJ81630.1| single-stranded DNA-binding protein [Acidiphilium multivorum
AIU301]
Length = 162
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V + +RL V + L GS IY+EG L+ + + D +G + EI + R G L+
Sbjct: 57 VVIMNDRLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIGAELVLL 114
>gi|153870489|ref|ZP_01999881.1| Single-strand binding protein/Primosomal replication protein n
[Beggiatoa sp. PS]
gi|152073041|gb|EDN70115.1| Single-strand binding protein/Primosomal replication protein n
[Beggiatoa sp. PS]
Length = 225
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + +SG T+ L T +++ E + TE WH
Sbjct: 4 GVNKVILVGHLGIDPEIRTTQSGMTIATVKLATNFSTKDKQTGEWRDETE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
RV V+ ERL +V ++L GS IYVEG ++ + D TG R + EI R
Sbjct: 56 RV-VFFERLAEIVKQYLRKGSQIYVEGRIKTNKWQDQNTGQDRYMTEIVARE 106
>gi|338990619|ref|ZP_08634451.1| Single-strand binding protein [Acidiphilium sp. PM]
gi|338205430|gb|EGO93734.1| Single-strand binding protein [Acidiphilium sp. PM]
Length = 158
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P + +SG + ++ T N++ E + TE WHRV
Sbjct: 3 KVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTE--------WHRVV 54
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
+ +RL V + L GS IY+EG L+ + + D +G + EI + R G L+
Sbjct: 55 IMNDRLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIGAELVLL 110
>gi|402702960|ref|ZP_10850939.1| single-stranded DNA-binding protein [Rickettsia helvetica C9P9]
Length = 152
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|157826305|ref|YP_001494025.1| single-stranded DNA-binding protein [Rickettsia akari str.
Hartford]
gi|157800263|gb|ABV75517.1| single-strand DNA-binding protein [Rickettsia akari str. Hartford]
Length = 152
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVAKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|67459717|ref|YP_247341.1| single-stranded DNA-binding protein [Rickettsia felis URRWXCal2]
gi|75535892|sp|Q4UJW3.1|SSB_RICFE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|67005250|gb|AAY62176.1| Single-stranded DNA-binding protein [Rickettsia felis URRWXCal2]
Length = 152
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|344924255|ref|ZP_08777716.1| single-stranded DNA-binding protein [Candidatus Odyssella
thessalonicensis L13]
Length = 163
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K LVG++G+ P + G + S+ T +R E + TE WHR
Sbjct: 5 VNKVTLVGRLGKDPEVRNSPDGAKIVTMSVATSEAWKDRSSGEKKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E+LG + ++L GS +YVEG+L+ + + D G+ + E+ I+R
Sbjct: 57 VVIFNEKLGEIAERYLKKGSQVYVEGSLQTRKWADQ-QGIEKYTTEVVIQR 106
>gi|239948387|ref|ZP_04700140.1| single-stranded DNA-binding protein [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239922663|gb|EER22687.1| single-stranded DNA-binding protein [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 151
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|114765567|ref|ZP_01444668.1| single-strand binding protein [Pelagibaca bermudensis HTCC2601]
gi|114542016|gb|EAU45049.1| single-strand binding protein [Roseovarius sp. HTCC2601]
Length = 159
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++G V FSL T +R + TE WHR
Sbjct: 5 VNKVILVGHLGADPELRTFQNGGKVCNFSLATSETWKDRNTGDRRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
VS+ E L + ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VSILNEGLCSIAERYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|409399331|ref|ZP_11249646.1| single-strand binding protein [Acidocella sp. MX-AZ02]
gi|409131487|gb|EKN01188.1| single-strand binding protein [Acidocella sp. MX-AZ02]
Length = 171
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P + +SG V ++ T N++ E + TE WHRV
Sbjct: 3 KVILVGNLGRDPEIRNTQSGMKVVNLAVATSESWNDKASGERKELTE--------WHRVV 54
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGTYLIF 198
+ +RL V K+L GS +Y+EG L+ + + D +G R EI I R NG ++
Sbjct: 55 IMNDRLADVAEKYLKKGSKLYLEGKLQTRKWTDQ-SGQERYTAEIMIGRFNGELVLL 110
>gi|383311901|ref|YP_005364702.1| single-stranded DNA-binding protein [Candidatus Rickettsia
amblyommii str. GAT-30V]
gi|378930561|gb|AFC69070.1| single-stranded DNA-binding protein [Candidatus Rickettsia
amblyommii str. GAT-30V]
Length = 152
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L V +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVAERYITKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|379714214|ref|YP_005302552.1| single-stranded DNA-binding protein [Rickettsia massiliae str.
AZT80]
gi|383480882|ref|YP_005389797.1| single-stranded DNA-binding protein [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|376334860|gb|AFB32092.1| single-stranded DNA-binding protein [Rickettsia massiliae str.
AZT80]
gi|378933221|gb|AFC71724.1| single-stranded DNA-binding protein [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 152
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ + L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSDGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|402773712|ref|YP_006593249.1| ssDNA-binding protein [Methylocystis sp. SC2]
gi|401775732|emb|CCJ08598.1| Single-stranded DNA-binding protein [Methylocystis sp. SC2]
Length = 167
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + L SG V FS+ T ++N E +R +WH
Sbjct: 5 VNKVILIGNLGRDPEVRTLPSGDRVVSFSVAT------TESWRDKNTGERKDR--TEWHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
VS++ E LG + ++ GS IY+EG L+ + + D G R+ ++ ++R
Sbjct: 57 VSIFNENLGKIAEQYCRKGSKIYLEGQLQTREYTDK-DGNQRKATDVVLQR 106
>gi|209542719|ref|YP_002274948.1| ssDNA-binding protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530396|gb|ACI50333.1| single-strand binding protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 184
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ ERL V + L G +Y+EG L+ + + D +G R E+ I R L+
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGTLQTRKWTDQ-SGQERYTTEVVIDRFRGELVLL 114
>gi|406941947|gb|EKD74303.1| Single-stranded DNA-binding protein [uncultured bacterium]
Length = 149
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K IL+G +G+ P + +G V S+ T +++ EN+ TE WHR
Sbjct: 6 INKVILIGNLGRDPEVRYTPNGLAVANISIATTEAWKDKQSGENQERTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+++Y RL +V ++L GS IY+EG L+ + + D TG R E+
Sbjct: 58 IALYG-RLAEIVGEYLRKGSKIYIEGRLQTRKWQDKNTGQDRYTTEV 103
>gi|386012330|ref|YP_005930607.1| ssDNA-binding protein [Pseudomonas putida BIRD-1]
gi|313499036|gb|ADR60402.1| Single-strand binding protein [Pseudomonas putida BIRD-1]
Length = 165
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T ++R E TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKRSGEKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NGT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDMNGTMQLL 111
>gi|116515274|ref|YP_802903.1| hypothetical protein BCc_357 [Buchnera aphidicola BCc]
gi|116257128|gb|ABJ90810.1| single-strand DNA-binding protein [Buchnera aphidicola BCc]
Length = 181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G TV +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ ++ + ++L GS +Y+EG+L+ + + D GL R EI + G+
Sbjct: 57 RVVLFG-KIAEISGQYLKKGSQVYIEGSLQTRKWKDQ-NGLDRYTTEIVVSVTGS 109
>gi|423693831|ref|ZP_17668351.1| single-strand DNA-binding protein [Pseudomonas fluorescens SS101]
gi|388002025|gb|EIK63354.1| single-strand DNA-binding protein [Pseudomonas fluorescens SS101]
Length = 171
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ E + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTNERKEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|304391778|ref|ZP_07373720.1| single-stranded DNA-binding protein [Ahrensia sp. R2A130]
gi|303296007|gb|EFL90365.1| single-stranded DNA-binding protein [Ahrensia sp. R2A130]
Length = 171
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + G+ + FS+ T +R E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRRTQDGKAIANFSIATSETWRDRNSGERREKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
++ + E L V+ +++ GS +Y+EG L+ + + D G+ + EI ++
Sbjct: 57 IACFNEGLNKVIEQYVKKGSKVYIEGQLQTRKWTDN-AGVEKYTTEIVLQ 105
>gi|285017834|ref|YP_003375545.1| single-stranded DNA-binding protein [Xanthomonas albilineans GPE
PC73]
gi|283473052|emb|CBA15557.1| probable single-stranded dna-binding protein [Xanthomonas
albilineans GPE PC73]
Length = 171
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG +T SL T +R +R + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQSGMAITRVSLATTSVRKDRDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|254785116|ref|YP_003072544.1| single-stranded DNA-binding protein [Teredinibacter turnerae T7901]
gi|237685420|gb|ACR12684.1| single-stranded DNA-binding protein [Teredinibacter turnerae T7901]
Length = 163
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG VT S+ T +++ +N+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPETRYMPSGGAVTNISIATSESWKDKQTGQNQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV+ + RL V ++L GS +YVEG+L + + D
Sbjct: 57 RVAFFG-RLAEVAGEYLRKGSKVYVEGSLRTRKWQD 91
>gi|383501158|ref|YP_005414517.1| single-stranded DNA-binding protein [Rickettsia australis str.
Cutlack]
gi|378932169|gb|AFC70674.1| single-stranded DNA-binding protein [Rickettsia australis str.
Cutlack]
Length = 152
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L V+ +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSVIERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|325272720|ref|ZP_08139073.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
gi|324102166|gb|EGB99659.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
Length = 162
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T N+++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWNDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + NGT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLL 111
>gi|52840601|ref|YP_094400.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776302|ref|YP_005184734.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52627712|gb|AAU26453.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507111|gb|AEW50635.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 162
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 7 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 58
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 59 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 93
>gi|156094446|ref|XP_001613260.1| single-strand binding protein [Plasmodium vivax Sal-1]
gi|148802134|gb|EDL43533.1| single-strand binding protein, putative [Plasmodium vivax]
Length = 280
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 78 KISLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRIV 129
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
VY + + +V K L G +Y++G+L ++ F + +T R+I E+ + N LIF
Sbjct: 130 VYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQPRQITEVVLSYNKGDLIFL 187
>gi|384227960|ref|YP_005619705.1| single-strand binding protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538900|gb|AEO08877.1| single-strand binding protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 171
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
R+ ++ +L + ++L GS +Y+EG+L+ + + D GL R EI + GT +
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEIIVNIGGTMQML 113
>gi|54296392|ref|YP_122761.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Legionella pneumophila str. Paris]
gi|397662924|ref|YP_006504462.1| ssDNA-binding protein [Legionella pneumophila subsp. pneumophila]
gi|397666036|ref|YP_006507573.1| ssDNA-binding protein [Legionella pneumophila subsp. pneumophila]
gi|53750177|emb|CAH11569.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella pneumophila str. Paris]
gi|395126335|emb|CCD04516.1| Single-stranded DNA-binding protein [Legionella pneumophila subsp.
pneumophila]
gi|395129447|emb|CCD07677.1| Single-stranded DNA-binding protein [Legionella pneumophila subsp.
pneumophila]
Length = 159
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|51474004|ref|YP_067761.1| single-stranded DNA-binding protein [Rickettsia typhi str.
Wilmington]
gi|383752779|ref|YP_005427879.1| single-stranded DNA-binding protein [Rickettsia typhi str. TH1527]
gi|383843614|ref|YP_005424117.1| single-stranded DNA-binding protein [Rickettsia typhi str.
B9991CWPP]
gi|81826347|sp|Q68Y11.1|SSB_RICTY RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|51460316|gb|AAU04279.1| single-strand binding protein [Rickettsia typhi str. Wilmington]
gi|380759422|gb|AFE54657.1| single-stranded DNA-binding protein [Rickettsia typhi str. TH1527]
gi|380760261|gb|AFE55495.1| single-stranded DNA-binding protein [Rickettsia typhi str.
B9991CWPP]
Length = 152
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L +V +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSIVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|425072893|ref|ZP_18475999.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
gi|404596667|gb|EKA97187.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
Length = 169
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +GQ P + L +G VT +L T + +++ E + V+WH
Sbjct: 5 GVNKVLLIGHLGQDPEMRYLPNGDAVTNITLATSDLWKDKQSGE--------TKERVEWH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G R E+ + NG+ I
Sbjct: 57 RVVIF-GKLAKIAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVNINGSMQIL 113
>gi|423143252|ref|ZP_17130888.1| single-strand binding family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379049166|gb|EHY67063.1| single-strand binding family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 182
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ+P + + +G V L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQAPEVRYMPNGGAVANLQLATSDNWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV +Y +L V ++L GS +Y+EG L + ++D G+ R I E+ + GT
Sbjct: 57 RVVLYG-KLAEVAGEYLRKGSQVYIEGQLRTRSWDDN-NGVTRYITEVIVNTTGT 109
>gi|15604667|ref|NP_221185.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Madrid E]
gi|383486814|ref|YP_005404494.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
GvV257]
gi|383488230|ref|YP_005405909.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Chernikova]
gi|383489075|ref|YP_005406753.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Katsinyian]
gi|383489914|ref|YP_005407591.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Dachau]
gi|383500052|ref|YP_005413413.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500887|ref|YP_005414247.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
RpGvF24]
gi|386082730|ref|YP_005999309.1| ssDNA-binding protein [Rickettsia prowazekii str. Rp22]
gi|6647831|sp|Q9ZCC2.1|SSB_RICPR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|3861362|emb|CAA15261.1| SINGLE-STRAND BINDING PROTEIN (ssb) [Rickettsia prowazekii str.
Madrid E]
gi|292572496|gb|ADE30411.1| Single-stranded DNA-binding protein [Rickettsia prowazekii str.
Rp22]
gi|380757179|gb|AFE52416.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
GvV257]
gi|380758584|gb|AFE53820.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
RpGvF24]
gi|380761109|gb|AFE49631.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Chernikova]
gi|380761954|gb|AFE50475.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Katsinyian]
gi|380762798|gb|AFE51318.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763637|gb|AFE52156.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Dachau]
Length = 152
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L +V +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSEGLVSIVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|406936475|gb|EKD70186.1| Single-stranded DNA-binding protein [uncultured bacterium]
Length = 147
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + +G V ++ T +++ E + TE WH
Sbjct: 4 GINKVILIGNLGRDPEVRYTPNGLAVANITIATSESWKDKQSGEMQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ +RL +V ++L GS IYVEG L+ + + D TG R EI
Sbjct: 56 RV-VFYQRLAEIVGEYLRKGSKIYVEGRLQTRKWQDKNTGQDRYTTEI 102
>gi|307609164|emb|CBW98621.1| single-strand binding protein [Legionella pneumophila 130b]
Length = 159
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|71276419|ref|ZP_00652695.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71162735|gb|EAO12461.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71728562|gb|EAO30716.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F D G R + EI
Sbjct: 55 RVKFFG-KLGDIAAEYLHKGSQCYIEGTIRYDKFTDQ-DGQERYVTEI 100
>gi|406039922|ref|ZP_11047277.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 108
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
P + K IL+G +G+ P K+ +G +VT FSL T ++ E + TE W
Sbjct: 2 PNVNKVILMGVLGRDPETKQFPNGGSVTTFSLATSEHWKDKTTNERKEVTE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
HR+ V RL + K+L GS Y+EG+L + + D G+ R + EI
Sbjct: 54 HRI-VTSNRLAEIASKYLKKGSKAYIEGSLRTRKWKDQ-NGIDREVTEI 100
>gi|300724293|ref|YP_003713611.1| single-stranded DNA-binding protein [Xenorhabdus nematophila ATCC
19061]
gi|297630828|emb|CBJ91497.1| single-stranded DNA-binding protein [Xenorhabdus nematophila ATCC
19061]
Length = 170
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G TVT SL T +++ E TE WH
Sbjct: 5 GINKVILVGYLGQDPEIRYLPTGGTVTTLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG+ +
Sbjct: 57 RVVIFG-KLAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQML 113
>gi|157964985|ref|YP_001499809.1| single-stranded DNA-binding protein [Rickettsia massiliae MTU5]
gi|157844761|gb|ABV85262.1| Single-stranded DNA-binding protein [Rickettsia massiliae MTU5]
Length = 152
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEVRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ + L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ + LI
Sbjct: 59 IFSDGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|157804225|ref|YP_001492774.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
McKiel]
gi|379023366|ref|YP_005300027.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
CA410]
gi|157785488|gb|ABV73989.1| single-strand DNA-binding protein [Rickettsia canadensis str.
McKiel]
gi|376324304|gb|AFB21545.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
CA410]
Length = 152
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRVTGERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ LI
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNAQLILL 114
>gi|54293348|ref|YP_125763.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Legionella pneumophila str. Lens]
gi|53753180|emb|CAH14627.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella pneumophila str. Lens]
Length = 159
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|378768967|ref|YP_005197442.1| ssDNA-binding protein [Pantoea ananatis LMG 5342]
gi|365188455|emb|CCF11405.1| Single-stranded DNA-binding protein [Pantoea ananatis LMG 5342]
Length = 184
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G VT S+ T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGTAVTSLSVATSETWRDKQTGENREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS Y+EG L + + D G R EI + NGT +
Sbjct: 57 RVVLFG-KLAEIAGEYLRKGSQAYIEGKLRTREWQDS-EGTKRYTTEIVVDVNGTMQML 113
>gi|296105904|ref|YP_003617604.1| single-strand DNA-binding protein [Legionella pneumophila 2300/99
Alcoy]
gi|295647805|gb|ADG23652.1| single-strand DNA-binding protein [Legionella pneumophila 2300/99
Alcoy]
Length = 159
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|160872092|ref|ZP_02062224.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Rickettsiella grylli]
gi|159120891|gb|EDP46229.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Rickettsiella grylli]
Length = 152
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + + +G V +L T +++N E R +WH
Sbjct: 4 GINKVILIGNLGADPEIRHMPNGTAVAHINLATS------ESWKDKNTGELQERT--EWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ +RL +V ++L G+ +Y+EG L+ + + D TG R EI
Sbjct: 56 RIVLF-QRLAEIVAEYLKKGAKVYIEGRLQTRKWQDKTTGHDRYTTEI 102
>gi|414342269|ref|YP_006983790.1| single-strand DNA binding protein [Gluconobacter oxydans H24]
gi|411027604|gb|AFW00859.1| single-strand DNA binding protein [Gluconobacter oxydans H24]
Length = 186
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
ILVG +G+ P + +SG + ++ T N+R+ E + TE WHRV ++
Sbjct: 2 ILVGNLGKDPEVRNTQSGSKIVNLTVATSETWNDRQSGERKERTE--------WHRVVIF 53
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
+RLG V + L G +Y+EG L + + D +G R E+ I R
Sbjct: 54 NDRLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDR 99
>gi|148361028|ref|YP_001252235.1| single-strand binding protein [Legionella pneumophila str. Corby]
gi|148282801|gb|ABQ56889.1| Single-strand binding protein (SSB) (Helix- destabilizing protein)
[Legionella pneumophila str. Corby]
Length = 159
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|262377229|ref|ZP_06070454.1| RecBCD nuclease ssDNA-binding protein [Acinetobacter lwoffii SH145]
gi|262307967|gb|EEY89105.1| RecBCD nuclease ssDNA-binding protein [Acinetobacter lwoffii SH145]
Length = 195
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ V RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|15617138|ref|NP_240351.1| single-strand binding protein [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681890|ref|YP_002468276.1| single-strand binding protein [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682445|ref|YP_002468829.1| single-strand binding protein [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471595|ref|ZP_05635594.1| single-strand binding protein [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384226334|ref|YP_005617497.1| single-strand binding protein [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226823|ref|YP_005618574.1| single-strand binding protein [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|384227390|ref|YP_005619140.1| single-strand binding protein [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|414562894|ref|YP_005618085.1| single-strand binding protein [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|11387134|sp|P57610.1|SSB_BUCAI RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|25294289|pir||E84993 single-strand binding protein [imported] - Buchnera sp. (strain
APS)
gi|10039203|dbj|BAB13237.1| single-strand binding protein [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622178|gb|ACL30334.1| single-strand binding protein [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624733|gb|ACL30888.1| single-strand binding protein [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086266|gb|ADP66348.1| single-strand binding protein [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086841|gb|ADP66922.1| single-strand binding protein [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087430|gb|ADP67510.1| single-strand binding protein [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087920|gb|ADP67999.1| single-strand binding protein [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 171
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
R+ ++ +L + ++L GS +Y+EG+L+ + + D GL R EI + GT +
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEIIVNIGGTMQML 113
>gi|406035966|ref|ZP_11043330.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 198
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWVDKNSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V P RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLPNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|406980293|gb|EKE01918.1| hypothetical protein ACD_21C00025G0029 [uncultured bacterium]
Length = 161
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + SG V SL T +++ E ++ TE WH
Sbjct: 4 GVNKVILIGNLGNDPEVRYTPSGSAVATVSLATSETWRDKQSGEMQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ RL +V ++L GS IY+EG+L + + D +G+ R EI
Sbjct: 56 RV-VFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-SGMERYTTEI 101
>gi|238898622|ref|YP_002924303.1| single-stranded DNA-binding protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466381|gb|ACQ68155.1| single-stranded DNA-binding protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 181
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P +++ SG VT ++ T +++ E + TE WH
Sbjct: 5 GINKVILVGYLGQDPEVRRMPSGNPVTNITIATSESWRDKQTEEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V K+L GS +Y+EG L+ + + D G R E+ + G+ +
Sbjct: 57 RVVIFG-KLAEVAEKYLRKGSQVYIEGALQTRKWTDQ-NGQDRYTTEVIVGVTGSMQML 113
>gi|395233065|ref|ZP_10411311.1| single-strand binding protein [Enterobacter sp. Ag1]
gi|394732581|gb|EJF32249.1| single-strand binding protein [Enterobacter sp. Ag1]
Length = 185
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVASLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L G+ +Y+EG L + + D +G+ R + EI + +NGT +
Sbjct: 57 RVVLF-GKLAEIASEYLRKGAQVYIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQML 113
>gi|244539408|dbj|BAH83451.1| single-strand DNA-binding protein [Candidatus Ishikawaella
capsulata Mpkobe]
Length = 171
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +L+G +GQ P + +++G V +L T +++ E ++ TE WH
Sbjct: 5 GINKVMLIGNLGQDPEVRYMQNGNLVVNINLATSETWRDKKTGEKKDNTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
R+ ++ +L V ++L GS +Y+EG L + + D G R EI + NGT +
Sbjct: 57 RIVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWQDQ-NGKDRYTTEIVVGSNGTMQML 113
>gi|402819329|ref|ZP_10868897.1| single-stranded DNA-binding protein [alpha proteobacterium
IMCC14465]
gi|402511476|gb|EJW21737.1| single-stranded DNA-binding protein [alpha proteobacterium
IMCC14465]
Length = 156
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G P ++ K GR + S+ TG +++N E R +WHR
Sbjct: 5 INKVILVGNLGADPEIRQTKDGRPIANLSIATG------ESWKDKNTGE--RREKTEWHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLAKIAEQYLRKGSKVYIEGQLQTRKWQD 91
>gi|30410826|ref|NP_660857.2| single-strand binding protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 176
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 73 LENGL----DPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
LENG+ G+ K IL+G +GQ P + + +G V +L T ++ EN+ T
Sbjct: 8 LENGVLIMASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKT 67
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
E WHR+ ++ +L + ++L GS +Y+EG+L+ + + D GL R E+
Sbjct: 68 E--------WHRIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEVI 117
Query: 189 IRRNGT 194
+ GT
Sbjct: 118 VNIGGT 123
>gi|325918919|ref|ZP_08180990.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
gi|325534853|gb|EGD06778.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
Length = 180
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|21232166|ref|NP_638083.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767705|ref|YP_242467.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990822|ref|YP_001902832.1| ssDNA-binding protein [Xanthomonas campestris pv. campestris str.
B100]
gi|37999444|sp|Q8P778.1|SSB_XANCP RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21113919|gb|AAM42007.1| single-stranded DNA binding protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573037|gb|AAY48447.1| single-stranded DNA binding protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732582|emb|CAP50776.1| Single-stranded DNA binding protein [Xanthomonas campestris pv.
campestris]
Length = 172
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|146340931|ref|YP_001205979.1| single-stranded DNA-binding protein [Bradyrhizobium sp. ORS 278]
gi|146193737|emb|CAL77754.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 278]
Length = 165
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L GST+Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|334143263|ref|YP_004536419.1| single-strand binding protein [Thioalkalimicrobium cyclicum ALM1]
gi|333964174|gb|AEG30940.1| single-strand binding protein [Thioalkalimicrobium cyclicum ALM1]
Length = 192
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + +G + S+ T N+R E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPEVRFAANGNAIANLSVATSEQWNDRATGERQERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
RV ++ +L + ++L GS +Y EG L+ + + D TG + EI I + G +
Sbjct: 55 RVVIFG-KLAEIAQQYLTKGSQVYFEGKLQTRKWQDQATGQDKYSTEIVIDQGGGVM 110
>gi|152973678|ref|YP_001338719.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|294496754|ref|YP_003560447.1| single-stranded binding protein [Klebsiella pneumoniae]
gi|410656317|ref|YP_006958916.1| ssb [Klebsiella pneumoniae]
gi|419977200|ref|ZP_14492566.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419982938|ref|ZP_14498173.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419988709|ref|ZP_14503777.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419994409|ref|ZP_14509313.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|420000222|ref|ZP_14514966.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420006029|ref|ZP_14520620.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420011736|ref|ZP_14526169.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420017633|ref|ZP_14531894.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420023320|ref|ZP_14537448.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420029102|ref|ZP_14543041.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420034855|ref|ZP_14548614.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420040452|ref|ZP_14554050.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420046249|ref|ZP_14559681.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051979|ref|ZP_14565242.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420057795|ref|ZP_14570906.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420063428|ref|ZP_14576350.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420069190|ref|ZP_14581933.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420074929|ref|ZP_14587509.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420080787|ref|ZP_14593189.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420086465|ref|ZP_14598620.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421909908|ref|ZP_16339708.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|428943417|ref|ZP_19016316.1| single-stranded binding protein [Klebsiella pneumoniae VA360]
gi|150958460|gb|ABR80488.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|293339463|gb|ADE44017.1| single-stranded binding protein [Klebsiella pneumoniae]
gi|359730556|gb|AEV55300.1| ssb [Klebsiella pneumoniae]
gi|397338769|gb|EJJ32078.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397339049|gb|EJJ32325.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397339326|gb|EJJ32580.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397356266|gb|EJJ49114.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397356383|gb|EJJ49218.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397358225|gb|EJJ50951.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397373312|gb|EJJ65752.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397374493|gb|EJJ66825.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397378886|gb|EJJ71091.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397389496|gb|EJJ81433.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397391230|gb|EJJ83100.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397397210|gb|EJJ88887.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397407106|gb|EJJ98507.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397407460|gb|EJJ98851.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397415190|gb|EJK06378.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397423736|gb|EJK14657.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397424691|gb|EJK15588.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397432005|gb|EJK22672.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397439633|gb|EJK30070.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397446080|gb|EJK36307.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|410116204|emb|CCM82333.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|426296767|gb|EKV59347.1| single-stranded binding protein [Klebsiella pneumoniae VA360]
Length = 170
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V F+L T +++ + TE WH
Sbjct: 5 GVNKVILVGYLGQDPEVRYLPSGGAVANFTLATSETWRDKQDGQMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ +L V ++L G+ +Y+EG L + + D +GL + + E+ + GT +
Sbjct: 57 RVVVFG-KLAEVAGEYLRKGAQVYIEGQLRSRKWTDQ-SGLEKYVTEVVVNVGGTMQML 113
>gi|416021271|ref|ZP_11566945.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320321152|gb|EFW77293.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 198
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLHKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|66047745|ref|YP_237586.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B728a]
gi|63258452|gb|AAY39548.1| single-strand binding protein [Pseudomonas syringae pv. syringae
B728a]
Length = 183
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ E + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGEKKEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|421520423|ref|ZP_15967088.1| ssDNA-binding protein [Pseudomonas putida LS46]
gi|402755741|gb|EJX16210.1| ssDNA-binding protein [Pseudomonas putida LS46]
Length = 165
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T ++R E TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKRSGEKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L G+ Y+EG L+ + + G+ R EI + NGT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGAQCYIEGKLQTREWEK--DGIKRYTTEIVVDINGTMQLL 111
>gi|289667161|ref|ZP_06488236.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 181
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|289664595|ref|ZP_06486176.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 181
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|367471946|ref|ZP_09471543.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 285]
gi|365275785|emb|CCD84011.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 285]
Length = 164
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L GST+Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|424926277|ref|ZP_18349202.1| Ssb [Pseudomonas fluorescens R124]
gi|404307002|gb|EJZ60963.1| Ssb [Pseudomonas fluorescens R124]
Length = 171
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRDLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|421853748|ref|ZP_16286408.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371477998|dbj|GAB31611.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 162
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG+ + F+L T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRHSQSGQKIVSFTLATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
+ ++ ERL V + L G +Y+EG+L+ + +
Sbjct: 57 IVIFNERLADVAERFLRKGRKVYLEGSLQTRKW 89
>gi|420350514|ref|ZP_14851851.1| single-stranded DNA-binding protein, partial [Shigella boydii
4444-74]
gi|391294678|gb|EIQ52879.1| single-stranded DNA-binding protein, partial [Shigella boydii
4444-74]
Length = 156
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + L +G V +L T +++ E + TE WH
Sbjct: 5 GINKVILIGHLGQDPEIRYLPNGGAVANLTLATSESWRDKQSGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R E+ + NGT +
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLKTRKWFDQQNGVDRYATEVVVSVNGTLQML 114
>gi|400405699|ref|YP_006588558.1| single stranded DNA-binding protein [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400364062|gb|AFP85130.1| single stranded DNA-binding protein [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 152
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRHMPNGGVVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + NGT +
Sbjct: 57 RVVLFG-KLADVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNINGTMKML 113
>gi|365888818|ref|ZP_09427555.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3809]
gi|365335477|emb|CCE00086.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3809]
Length = 165
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L GST+Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|296100779|ref|YP_003610925.1| single-strand DNA-binding protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|397166200|ref|ZP_10489646.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
gi|295055238|gb|ADF59976.1| single-strand DNA-binding protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|396092362|gb|EJI89926.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
Length = 166
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + VT S+ T +++ EN TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPDSTAVTTLSVATSETWRDKQTGENRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G+ R E+ + NGT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTD-TNGIERWTTEVRVGVNGTMQML 113
>gi|148653789|ref|YP_001280882.1| single-strand binding protein [Psychrobacter sp. PRwf-1]
gi|148572873|gb|ABQ94932.1| single-strand binding protein [Psychrobacter sp. PRwf-1]
Length = 230
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GVNKVIIIGNLGNDPETRQFSNGGSVTNISVATSEQWTDKQTGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV+++ RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RVTLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKWQD 89
>gi|323138614|ref|ZP_08073681.1| single-strand binding protein [Methylocystis sp. ATCC 49242]
gi|322396102|gb|EFX98636.1| single-strand binding protein [Methylocystis sp. ATCC 49242]
Length = 171
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + SG V FSL T ++ E ++ TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTFPSGDRVVSFSLATTESWRDKATGERKDRTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E LG + ++ G+ IY+EG L+ + + D G R++ E+ + R
Sbjct: 57 VQIFNEALGKIAEQYCRKGAKIYLEGQLQTREYTDK-DGNQRKVTEVVVPR 106
>gi|384418502|ref|YP_005627862.1| single-stranded DNA binding protein [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353461416|gb|AEQ95695.1| single-stranded DNA binding protein [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 183
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|380511400|ref|ZP_09854807.1| single-stranded DNA-binding protein [Xanthomonas sacchari NCPPB
4393]
Length = 174
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSVRKDRDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG++
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSI 82
>gi|269468857|gb|EEZ80455.1| single-stranded DNA-binding protein [uncultured SUP05 cluster
bacterium]
Length = 93
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K ILVG++GQ P K GR + S+ T ++ E + TE W
Sbjct: 2 AGVNKVILVGRLGQDPDVKYTADGRAIANISIATSDTWKDKNTGEKQERTE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
HRV V+ +L +V ++L GS +YVEG L+ + + D
Sbjct: 54 HRV-VFFGKLAEIVAEYLKKGSQVYVEGKLQTRKWQDK 90
>gi|339061946|ref|ZP_08649115.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC2047]
gi|330720028|gb|EGG98463.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC2047]
Length = 170
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG VT +L T R ++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPETRYLPSGGAVTNVTLATSETRKDKSSGQQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV V+ RLG + ++L GS +YVEG+L + +
Sbjct: 57 RV-VFFNRLGEIAGEYLRKGSKVYVEGSLRTRKWQ 90
>gi|333369819|ref|ZP_08461914.1| single-stranded DNA-binding protein [Psychrobacter sp. 1501(2011)]
gi|332969465|gb|EGK08485.1| single-stranded DNA-binding protein [Psychrobacter sp. 1501(2011)]
Length = 219
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GINKVIIIGNLGADPETRQFSNGGSVTNISVATSEQWTDKQTGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKWQDQ-NGQDRYTTEI 100
>gi|416563644|ref|ZP_11762841.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|417377903|ref|ZP_12146695.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|417472054|ref|ZP_12167876.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|417533869|ref|ZP_12187794.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|327412968|emb|CAX67986.1| single stranded binding protein [Salmonella enterica subsp. VII]
gi|353588496|gb|EHC47526.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353655502|gb|EHC96496.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353659802|gb|EHC99592.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|363571705|gb|EHL55610.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
Length = 178
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++GT +
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQML 113
>gi|421693730|ref|ZP_16133363.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-692]
gi|404570367|gb|EKA75444.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-692]
Length = 193
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|417843724|ref|ZP_12489792.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
gi|341948637|gb|EGT75257.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
Length = 154
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I++G +G +P + +++G TV FS+ T ++ E TE WH
Sbjct: 3 GINKVIIIGNLGNAPEIRAMQNGDTVANFSVATSESWVDKNTQEKRENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
R+ +Y RL + ++L GS +YVEG L+ + + D G + EI G+YL
Sbjct: 55 RIVLY-RRLADIAGQYLRKGSKVYVEGKLKTRQWQDE-KGQTHYVTEII----GSYL 105
>gi|333898870|ref|YP_004472743.1| single-strand binding protein [Pseudomonas fulva 12-X]
gi|333114135|gb|AEF20649.1| single-strand binding protein [Pseudomonas fulva 12-X]
Length = 164
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L SG VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQRVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|384428722|ref|YP_005638082.1| single-strand binding protein [Xanthomonas campestris pv. raphani
756C]
gi|341937825|gb|AEL07964.1| single-strand binding protein [Xanthomonas campestris pv. raphani
756C]
Length = 173
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|410690638|ref|YP_006964351.1| Single-stranded DNA-binding protein [Salmonella sp. 14]
gi|389597322|gb|AFK90074.1| Single-stranded DNA-binding protein [Salmonella sp. 14]
Length = 184
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +YVEG L + + D +G+ R + EI + +NGT +
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQML 113
>gi|418054854|ref|ZP_12692909.1| single-strand binding protein [Hyphomicrobium denitrificans 1NES1]
gi|353210436|gb|EHB75837.1| single-strand binding protein [Hyphomicrobium denitrificans 1NES1]
Length = 173
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG+ P ++ + GR + SL T +++ E + TE WHR
Sbjct: 5 VNKVILVGNVGKDPEIRRTQDGRPIANLSLATSETWRDKQTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGTYLIF 198
V ++ E L VV +++ GS +Y+EG L+ + + D +G + E+ ++ NGT +
Sbjct: 57 VVIFSEPLCKVVEQYVKKGSKLYIEGALQTRKWTDQ-SGAEKYSTEVVLQGFNGTLTML 114
>gi|50086413|ref|YP_047923.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ADP1]
gi|49532389|emb|CAG70101.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ADP1]
Length = 192
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|408823277|ref|ZP_11208167.1| single-stranded DNA-binding protein [Pseudomonas geniculata N1]
Length = 191
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQSGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|418851685|ref|ZP_13406393.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392816616|gb|EJA72539.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 189
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGNLGQDPELRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ +L + ++L GS +Y+EG L + ++D G+ R + EI + GT +
Sbjct: 57 RVVVF-GKLAEIAGEYLRKGSQVYIEGQLRTRSWDDN-NGVTRYVTEIVVSMQGTMQML 113
>gi|350426037|ref|XP_003494313.1| PREDICTED: single-stranded DNA-binding protein-like [Bombus
impatiens]
Length = 170
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G VT S+ T +++ E + TE WH
Sbjct: 5 GINKVILVGNLGQDPEVRYLPNGGAVTTISVATSETWKDKQTGEPKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ RL + ++L GS +Y+EG L+ + + D TG R E+ + G I
Sbjct: 57 RVVIFG-RLAEIAGEYLRRGSQVYIEGALQTRKWQDQ-TGQDRYTTEVVVNIGGVLQIL 113
>gi|124506097|ref|XP_001351646.1| single-strand binding protein, putative [Plasmodium falciparum 3D7]
gi|23504574|emb|CAD51453.1| single-strand binding protein, putative [Plasmodium falciparum 3D7]
Length = 284
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 84 KIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRIV 135
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
VY + + ++ K+L G +YV+G+L +K + + ++I EI + N LIF
Sbjct: 136 VYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIILSYNKGDLIFL 193
>gi|445490032|ref|ZP_21459040.1| single-stranded DNA-binding protein [Acinetobacter baumannii
AA-014]
gi|444766474|gb|ELW90749.1| single-stranded DNA-binding protein [Acinetobacter baumannii
AA-014]
Length = 193
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|78484672|ref|YP_390597.1| single-strand binding protein [Thiomicrospira crunogena XCL-2]
gi|78362958|gb|ABB40923.1| single-strand binding protein [Thiomicrospira crunogena XCL-2]
Length = 201
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G + ++ T N++ + + TE WH
Sbjct: 4 GVNKVILVGTLGRDPEIKYAANGNAIANLNVATSEQWNDKASGQKQEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RV ++ +L + ++L GS +Y+EG L+ + + D TG R E+ I NG
Sbjct: 56 RVVIFG-KLAEIAGQYLTKGSQVYLEGKLQTRKWQDQNTGQDRYSTEVVIDFNG 108
>gi|416507210|ref|ZP_11735243.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363554012|gb|EHL38257.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
Length = 178
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++GT +
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSLVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQML 113
>gi|168822792|ref|ZP_02834792.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|409248434|ref|YP_004193461.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|205340874|gb|EDZ27638.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320089249|emb|CBY99002.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 184
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +YVEG L + + D +G+ R + EI + +NGT +
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQML 113
>gi|169634709|ref|YP_001708445.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii SDF]
gi|169153501|emb|CAP02660.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii]
Length = 193
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|169794398|ref|YP_001712191.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AYE]
gi|213159026|ref|YP_002321024.1| single-strand binding protein [Acinetobacter baumannii AB0057]
gi|215481953|ref|YP_002324135.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
AB307-0294]
gi|239503874|ref|ZP_04663184.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB900]
gi|260557951|ref|ZP_05830164.1| single-stranded DNA-binding protein [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|301345189|ref|ZP_07225930.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB056]
gi|301510680|ref|ZP_07235917.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB058]
gi|301595812|ref|ZP_07240820.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB059]
gi|332854789|ref|ZP_08435552.1| single-strand binding family protein [Acinetobacter baumannii
6013150]
gi|332868901|ref|ZP_08438478.1| single-strand binding family protein [Acinetobacter baumannii
6013113]
gi|403673311|ref|ZP_10935612.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter sp. NCTC
10304]
gi|417550359|ref|ZP_12201438.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-18]
gi|417563883|ref|ZP_12214757.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC143]
gi|417574592|ref|ZP_12225446.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC-5]
gi|421620973|ref|ZP_16061901.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|421624177|ref|ZP_16065050.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC098]
gi|421641981|ref|ZP_16082512.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|421647693|ref|ZP_16088104.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|421650392|ref|ZP_16090769.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC0162]
gi|421654745|ref|ZP_16095072.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-72]
gi|421659878|ref|ZP_16100094.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-83]
gi|421663123|ref|ZP_16103277.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC110]
gi|421673663|ref|ZP_16113600.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|421680136|ref|ZP_16119995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC111]
gi|421690350|ref|ZP_16130021.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-116]
gi|421698353|ref|ZP_16137895.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|421789871|ref|ZP_16226115.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|421797130|ref|ZP_16233178.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-21]
gi|421800179|ref|ZP_16236158.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC1]
gi|421807215|ref|ZP_16243076.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC035]
gi|424058346|ref|ZP_17795843.1| single-strand binding protein [Acinetobacter baumannii Ab33333]
gi|445410638|ref|ZP_21432954.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-57]
gi|169147325|emb|CAM85186.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AYE]
gi|193078632|gb|ABO13676.2| RecBCD nuclease ssDNA-binding protein [Acinetobacter baumannii ATCC
17978]
gi|213058186|gb|ACJ43088.1| single-strand binding protein [Acinetobacter baumannii AB0057]
gi|213986980|gb|ACJ57279.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
AB307-0294]
gi|260408742|gb|EEX02047.1| single-stranded DNA-binding protein [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|332727791|gb|EGJ59195.1| single-strand binding family protein [Acinetobacter baumannii
6013150]
gi|332733049|gb|EGJ64250.1| single-strand binding family protein [Acinetobacter baumannii
6013113]
gi|395555639|gb|EJG21640.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC143]
gi|400210160|gb|EJO41130.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC-5]
gi|400386184|gb|EJP49258.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-18]
gi|404564622|gb|EKA69801.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-116]
gi|404572653|gb|EKA77695.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|404665588|gb|EKB33550.1| single-strand binding protein [Acinetobacter baumannii Ab33333]
gi|408510516|gb|EKK12178.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-72]
gi|408510910|gb|EKK12569.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC0162]
gi|408514733|gb|EKK16339.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|408515887|gb|EKK17466.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|408699833|gb|EKL45308.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|408701745|gb|EKL47167.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC098]
gi|408707211|gb|EKL52505.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-83]
gi|408714151|gb|EKL59306.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC110]
gi|410385881|gb|EKP38365.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|410390118|gb|EKP42520.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC111]
gi|410396996|gb|EKP49250.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|410397625|gb|EKP49871.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-21]
gi|410408387|gb|EKP60355.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC1]
gi|410416857|gb|EKP68628.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC035]
gi|444779811|gb|ELX03784.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-57]
gi|452952924|gb|EME58348.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
MSP4-16]
Length = 193
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|170742568|ref|YP_001771223.1| single-strand binding protein [Methylobacterium sp. 4-46]
gi|168196842|gb|ACA18789.1| single-strand binding protein [Methylobacterium sp. 4-46]
Length = 171
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T +++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRRLASGDPVVNLRLATSESWKDKQSGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y E L V ++L GS +YVEG L+ + + D +G+ + E+ ++R
Sbjct: 57 VVIYNENLARVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGVEKYTTEVVLQR 106
>gi|406990655|gb|EKE10290.1| hypothetical protein ACD_16C00056G0009 [uncultured bacterium]
Length = 152
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G+ P + + G V +L T ++ E + TE WHR
Sbjct: 5 INKVILVGNLGKDPEVRMTQEGVKVVNLALATSEQWRDKDTQERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ ER+ V K+L GS +Y+EG L+ + + D
Sbjct: 57 VVIFNERIADVADKYLRKGSKVYIEGQLQTRKWTD 91
>gi|424057701|ref|ZP_17795218.1| single-strand binding protein [Acinetobacter nosocomialis Ab22222]
gi|445438607|ref|ZP_21441430.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC021]
gi|407440217|gb|EKF46735.1| single-strand binding protein [Acinetobacter nosocomialis Ab22222]
gi|444752938|gb|ELW77608.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC021]
Length = 194
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|417554211|ref|ZP_12205280.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-81]
gi|417560324|ref|ZP_12211203.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|421199594|ref|ZP_15656755.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|421455651|ref|ZP_15904995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-123]
gi|421635190|ref|ZP_16075793.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-13]
gi|421803782|ref|ZP_16239694.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-694]
gi|395522906|gb|EJG10995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|395564591|gb|EJG26242.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|400211889|gb|EJO42851.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-123]
gi|400390628|gb|EJP57675.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-81]
gi|408702742|gb|EKL48150.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-13]
gi|410412248|gb|EKP64107.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-694]
Length = 193
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|395491201|ref|ZP_10422780.1| single-stranded DNA-binding protein (SSB) [Sphingomonas sp. PAMC
26617]
Length = 186
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P K ++G V + T ++ E + TE WH V+
Sbjct: 7 KVIIVGNLGRDPESKSFQNGGKVVNLRIATSETWKDKNSGERKEQTE--------WHSVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
++ E LGGV ++L GS +Y+EG L+ + + D
Sbjct: 59 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA 92
>gi|440802075|gb|ELR23014.1| singlestrand binding protein family [Acanthamoeba castellanii str.
Neff]
Length = 168
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGR-TVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G G P + G +VT F L T I N+ P QW
Sbjct: 29 GINKVILLGNAGAEPKMRTYNDGTASVTYFPLATNQIYTNKSGERVNKP---------QW 79
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
H + +Y + L V K + GS +YVEG L + + D TG + I EI +
Sbjct: 80 HNIVIYNDNLSQVAQKTVKKGSLVYVEGALSTRTYKDA-TGAEKTICEIIL 129
>gi|58039355|ref|YP_191319.1| single-strand DNA binding protein [Gluconobacter oxydans 621H]
gi|58001769|gb|AAW60663.1| Single-strand DNA binding protein [Gluconobacter oxydans 621H]
Length = 188
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGAKIVNLTVATSDTWNDKQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ ER V ++L G +Y+EG L + + D +G + E+ I R
Sbjct: 57 VVIFNERTADVAERYLRKGRKVYIEGELRTRKWTDQ-SGQEKYTTEVVIDR 106
>gi|209884678|ref|YP_002288535.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|337741665|ref|YP_004633393.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
gi|386030681|ref|YP_005951456.1| ssDNA-binding protein [Oligotropha carboxidovorans OM4]
gi|209872874|gb|ACI92670.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|336095749|gb|AEI03575.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM4]
gi|336099329|gb|AEI07152.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
Length = 161
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 INKVILVGNLGADPDIRRTQDGRAIANMSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
V ++ E L V ++L G+ +YVEG L+ + + D
Sbjct: 57 VVIFNEGLAKVAEQYLRKGAKVYVEGALQTRKWQDK 92
>gi|347758387|ref|YP_004865949.1| ssDNA-binding protein [Micavibrio aeruginosavorus ARL-13]
gi|347590905|gb|AEP09947.1| single-strand binding family protein [Micavibrio aeruginosavorus
ARL-13]
Length = 161
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++SG V S+ T +++N E R QWHR
Sbjct: 5 VNKVILVGNLGNDPDVRMMQSGGKVVNLSIAT------SESWKDKNSGERQERT--QWHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ + L V ++L G+ +Y+EG LE + + D G + E+ +R
Sbjct: 57 VVIFNDNLATVAERYLKKGAKVYIEGQLETRKYTDK-DGQEKYTTEVVLR 105
>gi|406040952|ref|ZP_11048307.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 187
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ V RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|421914723|ref|ZP_16344359.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|410122971|emb|CCM86984.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 323
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V F+L T +++ + TE WH
Sbjct: 158 GVNKVILVGYLGQDPEVRYLPSGGAVANFTLATSETWRDKQDGQMRENTE--------WH 209
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ +L V ++L G+ +Y+EG L + + D +GL + + E+ + GT +
Sbjct: 210 RVVVF-GKLAEVAGEYLRKGAQVYIEGQLRSRKWTDQ-SGLEKYVTEVVVNVGGTMQML 266
>gi|386783246|pdb|3ULP|A Chain A, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783247|pdb|3ULP|B Chain B, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783248|pdb|3ULP|C Chain C, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783249|pdb|3ULP|D Chain D, Plasmodium Falciparum Ssb Complex With Ssdna
Length = 124
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 8 KIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRIV 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
VY + + ++ K+L G +YV+G+L +K + + ++I EI + N LIF
Sbjct: 60 VYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIILSYNKGDLIFL 117
>gi|365104444|ref|ZP_09334068.1| single-strand binding protein [Citrobacter freundii 4_7_47CFAA]
gi|418512553|ref|ZP_13078794.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|363644253|gb|EHL83546.1| single-strand binding protein [Citrobacter freundii 4_7_47CFAA]
gi|366083585|gb|EHN47504.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 184
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +YVEG L + + D +G+ R + EI + +NGT +
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQML 113
>gi|325919581|ref|ZP_08181593.1| single-strand binding protein [Xanthomonas gardneri ATCC 19865]
gi|325549917|gb|EGD20759.1| single-strand binding protein [Xanthomonas gardneri ATCC 19865]
Length = 174
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +Y+EG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYIEGEL 82
>gi|294083970|ref|YP_003550727.1| single-stranded DNA-binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663542|gb|ADE38643.1| Single-stranded DNA-binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 168
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K LVG +G+ P + + G + SL T +R E TE WHR
Sbjct: 5 VNKVTLVGNLGRDPEVRSTQDGAKIVQLSLATSERWKDRNTGEQRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E LG + ++L GST Y+EG L+ + + D G+ + E+ ++R
Sbjct: 57 VVIFNENLGRIAEQYLRKGSTCYIEGQLQTRKWTDN-QGVEKYTTEVVLQR 106
>gi|16763010|ref|NP_458627.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144497|ref|NP_807839.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161420|ref|ZP_03347130.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213428139|ref|ZP_03360889.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213609821|ref|ZP_03369647.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646761|ref|ZP_03376814.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224586099|ref|YP_002639898.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|378962424|ref|YP_005219910.1| ssDNA-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|37999807|sp|Q9RHF4.1|SSB2_SALTI RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
AltName: Full=Helix-destabilizing protein 2
gi|25294300|pir||AB1027 single strand binding protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|6513859|gb|AAF14810.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|16505317|emb|CAD09315.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140135|gb|AAO71699.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|32454454|gb|AAP83026.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C]
gi|224470627|gb|ACN48457.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|374356296|gb|AEZ48057.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 178
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++GT +
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQML 113
>gi|49188562|ref|YP_025660.1| single-stranded binding protein [Pseudomonas syringae pv.
maculicola]
gi|422649057|ref|ZP_16712170.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|47525145|gb|AAT35159.1| single-stranded binding protein [Pseudomonas syringae pv.
maculicola]
gi|330962584|gb|EGH62844.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 186
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KIAEIAGEYLRKGSQVYIEGKLQTREWEK--DGVKRYTTEIVVDMQGTMQLI 111
>gi|327412812|emb|CAX67818.1| single strand binding protein [Salmonella bongori]
Length = 178
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++GT +
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQML 113
>gi|197104857|ref|YP_002130234.1| single-strand binding protein [Phenylobacterium zucineum HLK1]
gi|196478277|gb|ACG77805.1| single-strand binding protein [Phenylobacterium zucineum HLK1]
Length = 160
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRSLNSGDRVANLRIATSETWRDRSTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V +L GST+Y+EG+L+ + + D
Sbjct: 57 VVIFNENLVKVAENYLRKGSTVYIEGSLQTRKWTD 91
>gi|290474572|ref|YP_003467452.1| single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
gi|289173885|emb|CBJ80672.1| Single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
Length = 169
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G TV + S+ T +++ E TE WH
Sbjct: 5 GINKVILVGYLGQDPEIRYLPAGGTVAMLSMATSDNWRDKQTGEIREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG+ +
Sbjct: 57 RVVIFG-KLADIAAEYLQKGAQVYIEGQLKTRKWQDN-QGQDRYSTEVVVNVNGSMQML 113
>gi|357416959|ref|YP_004929979.1| single-stranded DNA-binding protein [Pseudoxanthomonas spadix
BD-a59]
gi|355334537|gb|AER55938.1| single-stranded DNA-binding protein [Pseudoxanthomonas spadix
BD-a59]
Length = 178
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G VT SL T +R ++ E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQGGMAVTRISLATTSVRKDK---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|160896266|ref|YP_001561848.1| ssDNA-binding protein [Delftia acidovorans SPH-1]
gi|160361850|gb|ABX33463.1| single-strand binding protein [Delftia acidovorans SPH-1]
Length = 188
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|333917307|ref|YP_004491039.1| single-strand binding protein [Delftia sp. Cs1-4]
gi|333747507|gb|AEF92684.1| single-strand binding protein [Delftia sp. Cs1-4]
Length = 189
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|365146438|ref|ZP_09349232.1| single-strand binding protein [Klebsiella sp. 4_1_44FAA]
gi|363643219|gb|EHL82542.1| single-strand binding protein [Klebsiella sp. 4_1_44FAA]
Length = 180
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 113
>gi|213422780|ref|ZP_03355823.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 176
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 3 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++GT +
Sbjct: 55 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQML 111
>gi|403051081|ref|ZP_10905565.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter bereziniae LMG 1003]
gi|445419723|ref|ZP_21435367.1| single-stranded DNA-binding protein [Acinetobacter sp. WC-743]
gi|444759539|gb|ELW84006.1| single-stranded DNA-binding protein [Acinetobacter sp. WC-743]
Length = 194
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|358012036|ref|ZP_09143846.1| single-stranded DNA-binding protein [Acinetobacter sp. P8-3-8]
Length = 197
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|398884989|ref|ZP_10639912.1| single stranded DNA-binding protein [Pseudomonas sp. GM60]
gi|398193269|gb|EJM80379.1| single stranded DNA-binding protein [Pseudomonas sp. GM60]
Length = 179
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|323669651|emb|CBJ94773.1| single strand binding protein [Salmonella bongori]
Length = 178
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++GT +
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQML 113
>gi|332872795|ref|ZP_08440760.1| single-strand binding family protein [Acinetobacter baumannii
6014059]
gi|384144919|ref|YP_005527629.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii MDR-ZJ06]
gi|385239226|ref|YP_005800565.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TCDC-AB0715]
gi|387122283|ref|YP_006288165.1| single stranded DNA-binding protein [Acinetobacter baumannii
MDR-TJ]
gi|407930705|ref|YP_006846348.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TYTH-1]
gi|416149871|ref|ZP_11603115.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
gi|417544522|ref|ZP_12195608.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC032]
gi|417571273|ref|ZP_12222130.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC189]
gi|417576259|ref|ZP_12227104.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-17]
gi|417870832|ref|ZP_12515782.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH1]
gi|417875321|ref|ZP_12520139.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH2]
gi|417882231|ref|ZP_12526537.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH4]
gi|421203820|ref|ZP_15660954.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC12]
gi|421533929|ref|ZP_15980208.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC30]
gi|421627793|ref|ZP_16068590.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC180]
gi|421668251|ref|ZP_16108291.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|421670133|ref|ZP_16110142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC099]
gi|421688701|ref|ZP_16128399.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-143]
gi|421705064|ref|ZP_16144505.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1122]
gi|421708843|ref|ZP_16148216.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1219]
gi|421790665|ref|ZP_16226864.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-2]
gi|424050657|ref|ZP_17788193.1| single-strand binding protein [Acinetobacter baumannii Ab11111]
gi|424061825|ref|ZP_17799312.1| single-strand binding protein [Acinetobacter baumannii Ab44444]
gi|425753997|ref|ZP_18871864.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-113]
gi|445484692|ref|ZP_21456727.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-78]
gi|323519727|gb|ADX94108.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TCDC-AB0715]
gi|332738956|gb|EGJ69818.1| single-strand binding family protein [Acinetobacter baumannii
6014059]
gi|333364240|gb|EGK46254.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
gi|342226105|gb|EGT91080.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH2]
gi|342226899|gb|EGT91852.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH1]
gi|342238155|gb|EGU02591.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH4]
gi|347595412|gb|AEP08133.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii MDR-ZJ06]
gi|385876775|gb|AFI93870.1| single stranded DNA-binding protein [Acinetobacter baumannii
MDR-TJ]
gi|395551721|gb|EJG17730.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC189]
gi|395569480|gb|EJG30142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-17]
gi|398326659|gb|EJN42803.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC12]
gi|400382410|gb|EJP41088.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC032]
gi|404560458|gb|EKA65701.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-143]
gi|404669410|gb|EKB37303.1| single-strand binding protein [Acinetobacter baumannii Ab11111]
gi|404675552|gb|EKB43251.1| single-strand binding protein [Acinetobacter baumannii Ab44444]
gi|407189157|gb|EKE60385.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1122]
gi|407189571|gb|EKE60797.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1219]
gi|407899286|gb|AFU36117.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TYTH-1]
gi|408709679|gb|EKL54920.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC180]
gi|409988178|gb|EKO44352.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC30]
gi|410380689|gb|EKP33269.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|410386691|gb|EKP39159.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC099]
gi|410405290|gb|EKP57331.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-2]
gi|425497390|gb|EKU63496.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-113]
gi|444767691|gb|ELW91937.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-78]
Length = 193
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|110598256|ref|ZP_01386532.1| single-strand binding protein [Chlorobium ferrooxidans DSM 13031]
gi|110340171|gb|EAT58670.1| single-strand binding protein [Chlorobium ferrooxidans DSM 13031]
Length = 185
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 69 FDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
F+ P N + G+ K +L+G++G+ PV ++ S TV F++ T + + + E
Sbjct: 10 FNEP-RNTMARGLNKVMLIGRLGKDPVSRQAGS-NTVCNFTIATSETFKDAQGSKQER-- 65
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+WH ++V+ RLG + ++L G +Y+EG L+ + ++DP +G + +I
Sbjct: 66 -------TEWHNIAVWG-RLGEICQQYLTKGREVYIEGKLQTRSWDDPKSGEKKYATDI 116
>gi|451940993|ref|YP_007461631.1| single-strand binding protein [Bartonella australis Aust/NH1]
gi|451900380|gb|AGF74843.1| single-strand binding protein [Bartonella australis Aust/NH1]
Length = 152
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
+ G+ K IL+G +G P L SG V +L T + +R+ E R V
Sbjct: 1 MASGVNKVILLGNLGADPKISSLNSGDRVANLTLATSEVWKDRKTGEK--------RERV 52
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+WH V ++ ERL + +L G+ IYVEG L+ + + D
Sbjct: 53 EWHNVVIFDERLVKLAEHYLKKGNKIYVEGQLQTRKWQD 91
>gi|184159800|ref|YP_001848139.1| single-stranded DNA-binding protein [Acinetobacter baumannii ACICU]
gi|384133493|ref|YP_005516105.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii 1656-2]
gi|417880318|ref|ZP_12524849.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH3]
gi|445470673|ref|ZP_21451605.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC338]
gi|183211394|gb|ACC58792.1| Single-stranded DNA-binding protein [Acinetobacter baumannii ACICU]
gi|322509713|gb|ADX05167.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii 1656-2]
gi|342225402|gb|EGT90400.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH3]
gi|444772627|gb|ELW96742.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC338]
Length = 193
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|398935316|ref|ZP_10666404.1| single stranded DNA-binding protein [Pseudomonas sp. GM41(2012)]
gi|398169802|gb|EJM57772.1| single stranded DNA-binding protein [Pseudomonas sp. GM41(2012)]
Length = 176
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|338974410|ref|ZP_08629771.1| single-stranded DNA-binding protein [Bradyrhizobiaceae bacterium
SG-6C]
gi|414166750|ref|ZP_11422982.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
gi|338232497|gb|EGP07626.1| single-stranded DNA-binding protein [Bradyrhizobiaceae bacterium
SG-6C]
gi|410892594|gb|EKS40386.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
Length = 161
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + S+ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLSVATSETWRDRNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKVYLEGQLQTRKWQD 91
>gi|338738189|ref|YP_004675151.1| single-stranded DNA-binding protein [Hyphomicrobium sp. MC1]
gi|337758752|emb|CCB64577.1| Single-stranded DNA-binding protein [Hyphomicrobium sp. MC1]
Length = 173
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG+ P ++ + GR + S+ T +++ E + TE WHR
Sbjct: 5 VNKVILVGNVGKDPEIRRTQDGRPIANLSIATSDTWRDKQTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGTYLIF 198
V V+ E L ++ +++ G+ +Y+EG L+ + + D +G + E+ I+ NGT +
Sbjct: 57 VVVFSEPLCKIIEQYVKKGAKLYIEGALQTRKWTDQ-SGAEKYSTEVVIQGYNGTLTML 114
>gi|432663345|ref|ZP_19898963.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
gi|431195782|gb|ELE94745.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
Length = 180
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 113
>gi|407368359|ref|ZP_11114891.1| protein Ssb [Pseudomonas mandelii JR-1]
Length = 175
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398852125|ref|ZP_10608794.1| single stranded DNA-binding protein [Pseudomonas sp. GM80]
gi|398245001|gb|EJN30533.1| single stranded DNA-binding protein [Pseudomonas sp. GM80]
Length = 174
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398860791|ref|ZP_10616435.1| single stranded DNA-binding protein [Pseudomonas sp. GM79]
gi|398234231|gb|EJN20114.1| single stranded DNA-binding protein [Pseudomonas sp. GM79]
Length = 175
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398999055|ref|ZP_10701808.1| single stranded DNA-binding protein [Pseudomonas sp. GM18]
gi|398132674|gb|EJM21936.1| single stranded DNA-binding protein [Pseudomonas sp. GM18]
Length = 173
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398838638|ref|ZP_10595912.1| single stranded DNA-binding protein [Pseudomonas sp. GM102]
gi|398901736|ref|ZP_10650527.1| single stranded DNA-binding protein [Pseudomonas sp. GM50]
gi|398993726|ref|ZP_10696664.1| single stranded DNA-binding protein [Pseudomonas sp. GM21]
gi|398115509|gb|EJM05291.1| single stranded DNA-binding protein [Pseudomonas sp. GM102]
gi|398134069|gb|EJM23244.1| single stranded DNA-binding protein [Pseudomonas sp. GM21]
gi|398179347|gb|EJM66959.1| single stranded DNA-binding protein [Pseudomonas sp. GM50]
Length = 174
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398990499|ref|ZP_10693681.1| single stranded DNA-binding protein [Pseudomonas sp. GM24]
gi|399015355|ref|ZP_10717629.1| single stranded DNA-binding protein [Pseudomonas sp. GM16]
gi|398108709|gb|EJL98659.1| single stranded DNA-binding protein [Pseudomonas sp. GM16]
gi|398144101|gb|EJM32961.1| single stranded DNA-binding protein [Pseudomonas sp. GM24]
Length = 174
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|414173653|ref|ZP_11428280.1| single-stranded DNA-binding protein [Afipia broomeae ATCC 49717]
gi|410890287|gb|EKS38086.1| single-stranded DNA-binding protein [Afipia broomeae ATCC 49717]
Length = 161
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLSIATSDTWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKVYIEGQLQTRKWQD 91
>gi|381172507|ref|ZP_09881634.1| single-stranded DNA-binding protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687074|emb|CCG38121.1| single-stranded DNA-binding protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 178
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|398878877|ref|ZP_10633982.1| single stranded DNA-binding protein [Pseudomonas sp. GM67]
gi|398197996|gb|EJM84964.1| single stranded DNA-binding protein [Pseudomonas sp. GM67]
Length = 174
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|296535352|ref|ZP_06897553.1| single-strand binding protein [Roseomonas cervicalis ATCC 49957]
gi|296264320|gb|EFH10744.1| single-strand binding protein [Roseomonas cervicalis ATCC 49957]
Length = 182
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G V L T +R E +WH
Sbjct: 5 VNKVILIGNLGKDPEVRNFQNGGRVVNLRLATTDTYKDREGNRQER---------TEWHS 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ E+LG + K+L GS +Y+EG LE + + D G R E+ +R G L
Sbjct: 56 VAIFNEKLGEIAEKYLRKGSKVYIEGKLETRKWQDQ-AGQDRYSTEVVLRNFGGELTLL 113
>gi|260550237|ref|ZP_05824450.1| single-stranded DNA-binding protein [Acinetobacter sp. RUH2624]
gi|260406765|gb|EEX00245.1| single-stranded DNA-binding protein [Acinetobacter sp. RUH2624]
Length = 194
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|90416591|ref|ZP_01224522.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[gamma proteobacterium HTCC2207]
gi|90331790|gb|EAS47018.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[gamma proteobacterium HTCC2207]
Length = 171
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG GQ P + L SG VT SL T ++ E + TE WH
Sbjct: 4 GINKVIIVGNCGQDPETRYLPSGGAVTNMSLATSESWKDKNTGEQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
+V V+ RLG + ++L GS +YVEG+L + +
Sbjct: 56 KV-VFFNRLGEIAGEYLKKGSKVYVEGSLRTRKW 88
>gi|398868939|ref|ZP_10624328.1| single stranded DNA-binding protein [Pseudomonas sp. GM78]
gi|398232200|gb|EJN18175.1| single stranded DNA-binding protein [Pseudomonas sp. GM78]
Length = 172
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398874812|ref|ZP_10630012.1| single stranded DNA-binding protein [Pseudomonas sp. GM74]
gi|398910792|ref|ZP_10655208.1| single stranded DNA-binding protein [Pseudomonas sp. GM49]
gi|398925583|ref|ZP_10661957.1| single stranded DNA-binding protein [Pseudomonas sp. GM48]
gi|398171944|gb|EJM59832.1| single stranded DNA-binding protein [Pseudomonas sp. GM48]
gi|398185133|gb|EJM72550.1| single stranded DNA-binding protein [Pseudomonas sp. GM49]
gi|398194035|gb|EJM81120.1| single stranded DNA-binding protein [Pseudomonas sp. GM74]
Length = 172
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|397662439|ref|YP_006503139.1| single-stranded DNA-binding protein [Taylorella equigenitalis ATCC
35865]
gi|394350618|gb|AFN36532.1| single-stranded DNA-binding protein [Taylorella equigenitalis ATCC
35865]
Length = 175
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG++G P + GR ++ S+GT + N++ E TE WHR
Sbjct: 3 VNKVILVGRLGNDPEVRSGTEGRVISTVSIGTNSVWNDKSSGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ RL + +L G+ +YVEG L+ + + D
Sbjct: 55 V-VFFNRLAEIARDYLRKGTQVYVEGRLKTRKYQD 88
>gi|25091285|sp|Q8K933.1|SSB_BUCAP RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21623439|gb|AAM68068.1| single-strand binding protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 162
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
R+ ++ +L + ++L GS +Y+EG+L+ + + D GL R E+ + GT +
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEVIVNIGGTMQML 113
>gi|78048605|ref|YP_364780.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325925952|ref|ZP_08187319.1| single-strand binding protein [Xanthomonas perforans 91-118]
gi|346725720|ref|YP_004852389.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78037035|emb|CAJ24766.1| single-stranded DNA binding protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325543617|gb|EGD15033.1| single-strand binding protein [Xanthomonas perforans 91-118]
gi|346650467|gb|AEO43091.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 177
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|21243632|ref|NP_643214.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|37999445|sp|Q8PIJ2.1|SSB_XANAC RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21109208|gb|AAM37750.1| single-stranded DNA binding protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 180
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|418516614|ref|ZP_13082786.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418519584|ref|ZP_13085636.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410705028|gb|EKQ63507.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410706630|gb|EKQ65088.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 178
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|393723018|ref|ZP_10342945.1| single-stranded DNA-binding protein (SSB) [Sphingomonas sp. PAMC
26605]
Length = 185
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I++G +G+ P K ++G V + T ++ E + TE WH V+
Sbjct: 8 KVIIIGNLGRDPESKSFQNGGKVVNLRIATSETWKDKNTGERKEQTE--------WHSVA 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
++ E LGGV ++L GS +Y+EG L+ + + D
Sbjct: 60 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA 93
>gi|294626300|ref|ZP_06704903.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666654|ref|ZP_06731891.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599446|gb|EFF43580.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603560|gb|EFF46974.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 176
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|388467353|ref|ZP_10141563.1| single-strand DNA-binding protein [Pseudomonas synxantha BG33R]
gi|388010933|gb|EIK72120.1| single-strand DNA-binding protein [Pseudomonas synxantha BG33R]
Length = 171
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|451940273|ref|YP_007460911.1| single-strand binding protein [Bartonella australis Aust/NH1]
gi|451899660|gb|AGF74123.1| single-strand binding protein [Bartonella australis Aust/NH1]
Length = 152
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
+ G+ K IL+G +G P L SG V +L T + +R+ E R V
Sbjct: 1 MASGVNKVILLGNLGADPKISSLNSGDRVANLTLATSEVWKDRKTGEK--------RERV 52
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+WH V ++ ERL + +L G IYVEG L+ + + D
Sbjct: 53 EWHNVVIFDERLVKLAEHYLKKGHKIYVEGQLQTRKWQD 91
>gi|262380491|ref|ZP_06073645.1| single-strand binding protein [Acinetobacter radioresistens SH164]
gi|262297937|gb|EEY85852.1| single-strand binding protein [Acinetobacter radioresistens SH164]
Length = 194
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ V RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|121998963|ref|YP_001003750.1| ssDNA-binding protein [Halorhodospira halophila SL1]
gi|121590368|gb|ABM62948.1| single-strand binding protein [Halorhodospira halophila SL1]
Length = 160
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G+ P + SG V +L T +R+ E + TE WH
Sbjct: 5 GVNKVILIGNLGRDPEVRYTASGSAVANVALATSDTWRDRQTGEQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV ++ RLG + ++L GS +Y+EG L+ + + D
Sbjct: 57 RVVMF-NRLGEIAGEYLRKGSKVYIEGRLQTRKWQD 91
>gi|416156198|ref|ZP_11604330.1| single-strand binding protein [Moraxella catarrhalis 101P30B1]
gi|416216445|ref|ZP_11623769.1| single-strand binding protein [Moraxella catarrhalis 7169]
gi|416220862|ref|ZP_11625671.1| single-strand binding protein [Moraxella catarrhalis 103P14B1]
gi|416228924|ref|ZP_11627856.1| single-strand binding protein [Moraxella catarrhalis 46P47B1]
gi|416236165|ref|ZP_11630531.1| single-strand binding protein [Moraxella catarrhalis 12P80B1]
gi|416237787|ref|ZP_11631142.1| single-strand binding protein [Moraxella catarrhalis BC1]
gi|416245760|ref|ZP_11634655.1| single-strand binding protein [Moraxella catarrhalis BC8]
gi|416253264|ref|ZP_11638287.1| single-strand binding protein [Moraxella catarrhalis O35E]
gi|421779212|ref|ZP_16215706.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
gi|326561905|gb|EGE12240.1| single-strand binding protein [Moraxella catarrhalis 7169]
gi|326563339|gb|EGE13606.1| single-strand binding protein [Moraxella catarrhalis 46P47B1]
gi|326563451|gb|EGE13716.1| single-strand binding protein [Moraxella catarrhalis 12P80B1]
gi|326565992|gb|EGE16153.1| single-strand binding protein [Moraxella catarrhalis 103P14B1]
gi|326568875|gb|EGE18944.1| single-strand binding protein [Moraxella catarrhalis BC1]
gi|326571847|gb|EGE21852.1| single-strand binding protein [Moraxella catarrhalis BC8]
gi|326575360|gb|EGE25285.1| single-strand binding protein [Moraxella catarrhalis 101P30B1]
gi|326578025|gb|EGE27889.1| single-strand binding protein [Moraxella catarrhalis O35E]
gi|407813653|gb|EKF84433.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
Length = 236
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + +G + S+ T +R E + TE WHR
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERKEHTE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL V ++L GS IYVEG+L + + D TG R EI
Sbjct: 55 V-VFNNRLAEVASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI 100
>gi|421466523|ref|ZP_15915202.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
WC-A-157]
gi|400203303|gb|EJO34296.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
WC-A-157]
Length = 194
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|426228127|ref|XP_004008166.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial [Ovis
aries]
Length = 148
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ +TV +FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKKTVRIFSLATNEMW---RSGENETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|357032124|ref|ZP_09094064.1| single-strand DNA binding protein [Gluconobacter morbifer G707]
gi|356414351|gb|EHH67998.1| single-strand DNA binding protein [Gluconobacter morbifer G707]
Length = 183
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRNTQSGTKIVNLTVATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ ER V + L G +Y+EG L + + D +G + E+ I R
Sbjct: 57 VVIFNERTADVAERFLRKGRKVYIEGELRTRKWTDQ-SGQEKYTTEVVIDR 106
>gi|354598994|ref|ZP_09017011.1| single-strand binding protein [Brenneria sp. EniD312]
gi|353676929|gb|EHD22962.1| single-strand binding protein [Brenneria sp. EniD312]
Length = 180
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L +G V SL T +++ E + TE WH
Sbjct: 5 GVNKVILVGFLGQDPEIRYLPAGSAVATLSLATSETWRDKQSGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVSMGGTMQML 113
>gi|229592872|ref|YP_002874991.1| single-stranded DNA-binding protein [Pseudomonas fluorescens SBW25]
gi|229364738|emb|CAY52715.1| single-strand binding protein [Pseudomonas fluorescens SBW25]
Length = 171
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|425748098|ref|ZP_18866086.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-348]
gi|425491644|gb|EKU57924.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-348]
Length = 193
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEISQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|424792452|ref|ZP_18218684.1| Single-stranded DNA binding protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422797083|gb|EKU25474.1| Single-stranded DNA binding protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 175
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG++
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSI 82
>gi|404251840|ref|ZP_10955808.1| single-strand binding protein [Sphingomonas sp. PAMC 26621]
Length = 188
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P K ++G V + T ++ E + TE WH V+
Sbjct: 7 KVIIVGNLGRDPESKSFQNGGKVVNLRIATSESWKDKNSGERKEQTE--------WHSVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
++ E LGGV ++L GS +Y+EG L+ + + D
Sbjct: 59 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA 92
>gi|260575189|ref|ZP_05843189.1| single-strand binding protein [Rhodobacter sp. SW2]
gi|259022449|gb|EEW25745.1| single-strand binding protein [Rhodobacter sp. SW2]
Length = 174
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V ++ T ++ E + TE WHR
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLNIATSETWRDKASGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
VS+ E L + ++L GST+Y+EG LE + + D +G R EI +R
Sbjct: 57 VSILNEPLAKIAEQYLKKGSTVYIEGQLETRKWQDQ-SGAERYTTEIVLR 105
>gi|226953624|ref|ZP_03824088.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ATCC 27244]
gi|294651864|ref|ZP_06729155.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter haemolyticus ATCC 19194]
gi|226835627|gb|EEH68010.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ATCC 27244]
gi|292822253|gb|EFF81165.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter haemolyticus ATCC 19194]
Length = 193
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|220924063|ref|YP_002499365.1| single-strand binding protein [Methylobacterium nodulans ORS 2060]
gi|219948670|gb|ACL59062.1| single-strand binding protein [Methylobacterium nodulans ORS 2060]
Length = 170
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLTSGDPVVNLRLATSESWKDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y E L V ++L GS +YVEG L+ + + D +G+ + E+ ++R
Sbjct: 57 VVIYNENLARVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGVEKYTTEVVLQR 106
>gi|440575494|emb|CCN80079.1| single-stranded DNA-binding [Klebsiella pneumoniae]
Length = 180
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 113
>gi|262370908|ref|ZP_06064232.1| single-stranded DNA-binding protein [Acinetobacter johnsonii SH046]
gi|262314270|gb|EEY95313.1| single-stranded DNA-binding protein [Acinetobacter johnsonii SH046]
Length = 194
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ V RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|418844635|ref|ZP_13399422.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392814266|gb|EJA70225.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
Length = 172
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +R+ E TE WH
Sbjct: 5 GVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRDRQDGEMREHTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV V+ +L + ++L G+ +Y+EG L + + D +G + E+ + +NGT
Sbjct: 57 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVGQNGT 109
>gi|77461270|ref|YP_350777.1| single-stranded DNA-binding protein [Pseudomonas fluorescens Pf0-1]
gi|398977374|ref|ZP_10687091.1| single stranded DNA-binding protein [Pseudomonas sp. GM25]
gi|424925174|ref|ZP_18348535.1| Ssb [Pseudomonas fluorescens R124]
gi|77385273|gb|ABA76786.1| single-strand binding protein [Pseudomonas fluorescens Pf0-1]
gi|398138118|gb|EJM27148.1| single stranded DNA-binding protein [Pseudomonas sp. GM25]
gi|404306334|gb|EJZ60296.1| Ssb [Pseudomonas fluorescens R124]
Length = 172
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGT 107
>gi|406914607|gb|EKD53771.1| Single-stranded DNA-binding protein [uncultured bacterium]
Length = 148
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K IL+G +G+ P + +G V ++ T +++ EN+ TE WHR
Sbjct: 6 INKVILIGNLGRDPEVRYTPNGLAVANITIATSEAWKDKQTGENQERTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL + ++L GS IY+EG L+ + + D TG R EI
Sbjct: 58 IVLYG-RLAEIAGEYLRKGSKIYIEGRLQTRKWQDKNTGQDRYTTEI 103
>gi|315122781|ref|YP_004063270.1| single-strand binding protein (ssb) [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496183|gb|ADR52782.1| single-strand binding protein (ssb) [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 155
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P + + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNLGADPDVRHTQDGRRIVNIRVATSENWKDRVTGERREKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E LG VV ++L GS +Y+EG+++ + + D +G R EI +R
Sbjct: 57 VVVFVEELGKVVEQYLKKGSKVYIEGSIQTRKWQDQ-SGNTRYTTEIIMR 105
>gi|390989942|ref|ZP_10260235.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555386|emb|CCF67210.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 178
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|334704419|ref|ZP_08520285.1| Single-stranded DNA-binding protein [Aeromonas caviae Ae398]
Length = 189
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|255320294|ref|ZP_05361479.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
SK82]
gi|421856229|ref|ZP_16288597.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255302733|gb|EET81965.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
SK82]
gi|403188333|dbj|GAB74798.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 194
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|194337561|ref|YP_002019355.1| single-strand binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310038|gb|ACF44738.1| single-strand binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 158
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG-GIRNNRRPLENENPTEYANRCAVQW 138
G+ K +L+G +G P K SG++ F+L T ++N L+ +W
Sbjct: 4 GLNKVMLIGHLGNDPEMKVTTSGQSRVTFTLATNENFKDNNGNLQER----------TEW 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
HR+ V+ +L + ++L G +YVEG L+ + ++DP G R EI
Sbjct: 54 HRIVVWA-KLAEICSQYLKKGRQVYVEGRLQTRSWDDPKNGEKRYTTEIVC 103
>gi|445461634|ref|ZP_21448893.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC047]
gi|444771358|gb|ELW95489.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC047]
Length = 193
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|58581062|ref|YP_200078.1| single-stranded DNA-binding protein [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|84622980|ref|YP_450352.1| single-stranded DNA-binding protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|58425656|gb|AAW74693.1| single-stranded DNA binding protein [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|84366920|dbj|BAE68078.1| single-stranded DNA binding protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 178
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|387895896|ref|YP_006326193.1| single-strand DNA-binding protein [Pseudomonas fluorescens A506]
gi|408479257|ref|ZP_11185476.1| single-strand DNA-binding protein [Pseudomonas sp. R81]
gi|440737886|ref|ZP_20917437.1| single-strand DNA-binding protein [Pseudomonas fluorescens
BRIP34879]
gi|447918563|ref|YP_007399131.1| single-strand DNA-binding protein [Pseudomonas poae RE*1-1-14]
gi|387161098|gb|AFJ56297.1| single-strand DNA-binding protein [Pseudomonas fluorescens A506]
gi|440381625|gb|ELQ18151.1| single-strand DNA-binding protein [Pseudomonas fluorescens
BRIP34879]
gi|445202426|gb|AGE27635.1| single-strand DNA-binding protein [Pseudomonas poae RE*1-1-14]
Length = 171
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|312963339|ref|ZP_07777822.1| single-strand DNA-binding protein [Pseudomonas fluorescens WH6]
gi|311282419|gb|EFQ61017.1| single-strand DNA-binding protein [Pseudomonas fluorescens WH6]
Length = 171
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|374619089|ref|ZP_09691623.1| single stranded DNA-binding protein [gamma proteobacterium HIMB55]
gi|374302316|gb|EHQ56500.1| single stranded DNA-binding protein [gamma proteobacterium HIMB55]
Length = 157
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L SG VT S+ T +++N + R +WH
Sbjct: 5 GINKVILVGNLGQEPEHRVLPSGGGVTNISIATS------ESWKDKNTGQMQERT--EWH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ RL + ++L GS +YVEG+L + + D +G R EI
Sbjct: 57 RV-VFFNRLAEIASEYLRKGSKVYVEGSLRTRKWQDQ-SGQDRYTTEI 102
>gi|359397583|ref|ZP_09190610.1| single-stranded DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
gi|357601092|gb|EHJ62784.1| single-stranded DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
Length = 193
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K ++G + L + T +R E + TE WH
Sbjct: 4 VNKVILVGNLGADPEVKSFQNGGRIALMRIATSESWKDRNTGERQERTE--------WHS 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+SV E L GVV ++L GS IYVEG L + + D
Sbjct: 56 ISVQSEGLVGVVERYLRKGSKIYVEGQLRTRKWQD 90
>gi|296112397|ref|YP_003626335.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
gi|295920091|gb|ADG60442.1| single-stranded DNA-binding protein [Moraxella catarrhalis BBH18]
Length = 236
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + +G + S+ T +R E + TE WHR
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERKEHTE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL + ++L GS IYVEG+L + + D TG R EI
Sbjct: 55 V-VFNNRLAEIASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI 100
>gi|310816479|ref|YP_003964443.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|385234095|ref|YP_005795437.1| ssDNA-binding protein [Ketogulonicigenium vulgare WSH-001]
gi|308755214|gb|ADO43143.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|343463006|gb|AEM41441.1| Single-stranded DNA-binding protein [Ketogulonicigenium vulgare
WSH-001]
Length = 155
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K L+G +G+ P + +G V ++ T ++ E + TE WH+
Sbjct: 5 VNKVFLIGNLGRDPEVRSFPNGGKVVNLNIATSETWRDKNTGERKERTE--------WHK 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ + L V K+L GS +Y+EG LE + + D +G R EIA+R
Sbjct: 57 VAIFNDGLANVAEKYLRKGSKVYIEGKLETRKWQDQ-SGTDRYTTEIALR 105
>gi|262277205|ref|ZP_06054998.1| single-strand binding protein family protein [alpha proteobacterium
HIMB114]
gi|262224308|gb|EEY74767.1| single-strand binding protein family protein [alpha proteobacterium
HIMB114]
Length = 152
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G+ V SL T ++ E + TE WHRV
Sbjct: 7 KVLLIGRLGNDPEIKQMSNGKNVARLSLATSETWKDKNTGERKEKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
++ E L VV ++L G+ +Y+EG ++ + D
Sbjct: 59 IFNEGLVNVVQQYLKKGAQVYIEGQIQTTKYTD 91
>gi|38257082|ref|NP_940736.1| single-strand DNA-binding protein [Pseudomonas syringae pv.
syringae]
gi|37723859|gb|AAR02185.1| Ssb [Pseudomonas syringae pv. syringae]
Length = 201
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|416019927|ref|ZP_11566550.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320321622|gb|EFW77726.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 201
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|319778676|ref|YP_004129589.1| ssDNA-binding protein [Taylorella equigenitalis MCE9]
gi|317108700|gb|ADU91446.1| Single-stranded DNA-binding protein [Taylorella equigenitalis MCE9]
gi|399115296|emb|CCG18095.1| single-stranded DNA-binding protein [Taylorella equigenitalis
14/56]
Length = 175
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG++G P + GR ++ S+GT + N++ E TE WHR
Sbjct: 3 VNKVILVGRLGNDPEVRSGTEGRVISTVSIGTNSVWNDKSSGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ RL + +L G+ +YVEG L+ + + D
Sbjct: 55 V-VFFNRLAEIARDYLRKGTQVYVEGRLKTRKYQD 88
>gi|417852657|ref|ZP_12498173.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338216470|gb|EGP02560.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 150
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K I+VG +GQ P K + +G VT S+ T + ++ E R V+W
Sbjct: 2 AGVNKVIIVGNLGQDPDHKVMTNGNPVTNISVATSEVWADKASGE--------KREVVEW 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
HR+++Y +R + + L GS +Y+EG L + + D
Sbjct: 54 HRITLY-QRQADIAAQFLKKGSKVYIEGRLRTRKWQD 89
>gi|411011830|ref|ZP_11388159.1| single-strand binding protein [Aeromonas aquariorum AAK1]
gi|423198567|ref|ZP_17185150.1| single-stranded DNA-binding protein [Aeromonas hydrophila SSU]
gi|404630100|gb|EKB26808.1| single-stranded DNA-binding protein [Aeromonas hydrophila SSU]
Length = 191
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|167554080|ref|ZP_02347821.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|418805214|ref|ZP_13360804.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|205321652|gb|EDZ09491.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|392767826|gb|EJA24587.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 185
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GVNKVIIVGNLGQDPEIRYIPNGSAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +++EG L + + D +G+ R + EI + +NGT +
Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVFIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQML 113
>gi|388457563|ref|ZP_10139858.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Fluoribacter dumoffii Tex-KL]
Length = 156
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VG P + L +G VT S+ T ++ E + TE WH
Sbjct: 4 GINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSEAWKDKATGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYVRKGSKLYVEGSLRTRKWQD 90
>gi|422296853|ref|ZP_16384505.1| Single-stranded DNA-binding protein [Pseudomonas avellanae BPIC
631]
gi|407991890|gb|EKG33638.1| Single-stranded DNA-binding protein [Pseudomonas avellanae BPIC
631]
Length = 197
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|423204189|ref|ZP_17190745.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
gi|404627394|gb|EKB24195.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
Length = 192
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|325914687|ref|ZP_08177028.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
gi|325539189|gb|EGD10844.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
Length = 202
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|319898823|ref|YP_004158916.1| single-strand DNA binding protein [Bartonella clarridgeiae 73]
gi|319402787|emb|CBI76336.1| single-strand DNA binding protein [Bartonella clarridgeiae 73]
Length = 162
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D +G R EI ++R
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-SGNDRYTTEIVLQR 106
>gi|407367965|ref|ZP_11114497.1| single-strand binding protein [Pseudomonas mandelii JR-1]
Length = 161
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P K L +G VT SL T +++ + TE WH
Sbjct: 37 GVNKVILVGTSGQVPEVKYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 88
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ R+ + +++V GS +Y+EG L+ + + G+ R E+ + +GT +
Sbjct: 89 RVSLFG-RVAEIAGEYVVKGSQVYIEGKLQTREWEK--DGIKRYTTEVVVDMHGTLQLL 144
>gi|330505176|ref|YP_004382045.1| single-strand binding protein [Pseudomonas mendocina NK-01]
gi|399522422|ref|ZP_10763086.1| ssb [Pseudomonas pseudoalcaligenes CECT 5344]
gi|328919462|gb|AEB60293.1| single-strand binding protein [Pseudomonas mendocina NK-01]
gi|399109856|emb|CCH39647.1| ssb [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 163
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L SG VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV+++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVALFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|359430093|ref|ZP_09221107.1| single-stranded DNA-binding protein [Acinetobacter sp. NBRC 100985]
gi|358234491|dbj|GAB02646.1| single-stranded DNA-binding protein [Acinetobacter sp. NBRC 100985]
Length = 192
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|430376136|ref|ZP_19430539.1| single-strand binding protein [Moraxella macacae 0408225]
gi|429541367|gb|ELA09395.1| single-strand binding protein [Moraxella macacae 0408225]
Length = 264
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG++G PV ++ +G VT S+ T +++ + R A +WH
Sbjct: 3 GVNKVIIVGRLGNDPVTRQFANGGNVTNISVATSEQWTDKQTGD--------RREATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RVS + +L + +L GS +YVEG+L + D G+ R +I
Sbjct: 55 RVSFFG-KLADIAANYLKKGSAVYVEGSLRTSKYTDQ-NGIERYATDI 100
>gi|226227220|ref|YP_002761326.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
gi|226090411|dbj|BAH38856.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
Length = 155
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AIL+G VGQ P + + +G V FSL TG + + + A QWHR
Sbjct: 8 AILIGNVGQDPEVRTVGTGGRVAQFSLATG---------KQWTDAQGNKQDATQWHRCVA 58
Query: 144 YPE---RLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
+ + L +V K++ G IYVEG +E + + D G R EI +R
Sbjct: 59 WNQGKYTLADIVEKYVRKGEKIYVEGEIEYRQWQDK-DGQTRYTTEIRVR 107
>gi|336233445|ref|YP_004590191.1| single-strand DNA-binding protein [Buchnera aphidicola (Cinara
tujafilina)]
gi|335345386|gb|AEH39932.1| single-strand DNA-binding protein [Buchnera aphidicola (Cinara
tujafilina)]
Length = 178
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T ++ E TE WH
Sbjct: 5 GINKVILIGNLGQDPDLRYMPNGTAVANINLATSDTWKDKNTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L + K+L G+ +Y+EG+L+ + + D G+ R EI + GT
Sbjct: 57 RVVLFG-KLAEIAGKYLKKGAQVYIEGSLQTRKWQDQ-NGIDRYTTEIIVSITGT 109
>gi|427426403|ref|ZP_18916461.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-136]
gi|425696864|gb|EKU66562.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-136]
Length = 195
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|398967326|ref|ZP_10681852.1| single stranded DNA-binding protein [Pseudomonas sp. GM30]
gi|398144882|gb|EJM33694.1| single stranded DNA-binding protein [Pseudomonas sp. GM30]
Length = 172
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGT 107
>gi|423097613|ref|ZP_17085409.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q2-87]
gi|397886352|gb|EJL02835.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q2-87]
Length = 173
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|254561436|ref|YP_003068531.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
DM4]
gi|254268714|emb|CAX24673.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
DM4]
Length = 188
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y + L V ++L GS +Y+EG L+ + + D +G+ + E+ ++R
Sbjct: 57 VVIYNDNLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGVEKYTTEVVLQR 106
>gi|117620675|ref|YP_858391.1| single-strand binding protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562082|gb|ABK39030.1| single-strand binding protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 192
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|336248196|ref|YP_004591906.1| single-stranded DNA-binding protein [Enterobacter aerogenes KCTC
2190]
gi|444353688|ref|YP_007389832.1| Single-stranded DNA-binding protein [Enterobacter aerogenes
EA1509E]
gi|334734252|gb|AEG96627.1| single-stranded DNA-binding protein [Enterobacter aerogenes KCTC
2190]
gi|443904518|emb|CCG32292.1| Single-stranded DNA-binding protein [Enterobacter aerogenes
EA1509E]
Length = 174
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEIVVNVGGTMQML 113
>gi|293610618|ref|ZP_06692918.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136369|ref|YP_004997019.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter calcoaceticus PHEA-2]
gi|292826962|gb|EFF85327.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123814|gb|ADY83337.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter calcoaceticus PHEA-2]
Length = 195
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|257485813|ref|ZP_05639854.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|422683576|ref|ZP_16741835.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|331012909|gb|EGH92965.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 201
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLHKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|257454594|ref|ZP_05619850.1| single-stranded DNA-binding protein [Enhydrobacter aerosaccus SK60]
gi|257447904|gb|EEV22891.1| single-stranded DNA-binding protein [Enhydrobacter aerosaccus SK60]
Length = 219
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +G P K+ +G +VT ++ T N+++ E TE WH
Sbjct: 3 GVNKVIIVGNLGSDPEVKQFANGGSVTRIAVATSEQWNDKQTGERREQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ +LG + ++L GS +Y+EG+L + D G+ R EI
Sbjct: 55 RISLF-NKLGEIAAQYLRKGSQVYIEGSLRTSKYTDQ-NGVERYATEI 100
>gi|213579978|ref|ZP_03361804.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 146
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++GT +
Sbjct: 57 RVVLYG-KLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQML 113
>gi|393784649|ref|ZP_10372811.1| single-stranded DNA-binding protein [Bacteroides salyersiae
CL02T12C01]
gi|392665184|gb|EIY58714.1| single-stranded DNA-binding protein [Bacteroides salyersiae
CL02T12C01]
Length = 154
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K SG V FSL T R N T+ R +WH +
Sbjct: 5 KVILLGNVGQDPKVKYFDSGSAVATFSLAT-----TDRAYTLANGTQVPERT--EWHNI- 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V R +V K+L G +YVEG L + + D G R + E+ +
Sbjct: 57 VASNRWAEIVDKYLHKGDKLYVEGKLRTRTYTDQ-AGATRYVTEVYV 102
>gi|146308890|ref|YP_001189355.1| single-strand binding protein [Pseudomonas mendocina ymp]
gi|421503855|ref|ZP_15950800.1| single-strand binding protein [Pseudomonas mendocina DLHK]
gi|145577091|gb|ABP86623.1| single-strand binding protein [Pseudomonas mendocina ymp]
gi|400345359|gb|EJO93724.1| single-strand binding protein [Pseudomonas mendocina DLHK]
Length = 162
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L SG VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV+++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVALFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|440746844|ref|ZP_20926119.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
gi|440370691|gb|ELQ07578.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
Length = 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|330812044|ref|YP_004356506.1| single-strand binding protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378953152|ref|YP_005210640.1| protein Ssb [Pseudomonas fluorescens F113]
gi|423699604|ref|ZP_17674094.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q8r1-96]
gi|327380152|gb|AEA71502.1| putative single-strand binding protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|359763166|gb|AEV65245.1| Ssb [Pseudomonas fluorescens F113]
gi|387997115|gb|EIK58445.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q8r1-96]
Length = 173
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|428937163|ref|ZP_19010491.1| single-stranded DNA-binding protein [Klebsiella pneumoniae JHCK1]
gi|426296839|gb|EKV59408.1| single-stranded DNA-binding protein [Klebsiella pneumoniae JHCK1]
Length = 180
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTMQML 113
>gi|405945696|gb|EKC17439.1| Single-stranded DNA-binding protein [Crassostrea gigas]
Length = 151
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G + S+ T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGRDPEVRSTQAGGKIVNLSIATSERWKDRNTGEQKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+++ E LG + ++L GST +VEG L+ + + D
Sbjct: 57 VAIFNEALGRIAEQYLKKGSTCHVEGQLQTRKWTD 91
>gi|404398230|ref|ZP_10989814.1| protein Ssb [Pseudomonas fuscovaginae UPB0736]
Length = 174
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|416243292|ref|ZP_11633813.1| single-strand binding protein [Moraxella catarrhalis BC7]
gi|416249032|ref|ZP_11636366.1| single-strand binding protein [Moraxella catarrhalis CO72]
gi|326569175|gb|EGE19236.1| single-strand binding protein [Moraxella catarrhalis BC7]
gi|326576554|gb|EGE26462.1| single-strand binding protein [Moraxella catarrhalis CO72]
Length = 236
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + +G + S+ T +R E + TE WHR
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERKEHTE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL + ++L GS IYVEG+L + + D TG R EI
Sbjct: 55 V-VFNNRLAEIASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI 100
>gi|426411749|ref|YP_007031848.1| single-stranded DNA-binding protein [Pseudomonas sp. UW4]
gi|426269966|gb|AFY22043.1| single-stranded DNA-binding protein [Pseudomonas sp. UW4]
Length = 170
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGT 107
>gi|398948072|ref|ZP_10672552.1| single stranded DNA-binding protein [Pseudomonas sp. GM33]
gi|398161080|gb|EJM49323.1| single stranded DNA-binding protein [Pseudomonas sp. GM33]
Length = 171
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGT 107
>gi|410689629|ref|YP_006963356.1| Single-stranded DNA-binding protein [Pseudomonas syringae]
gi|389596390|gb|AFK89155.1| Single-stranded DNA-binding protein [Pseudomonas syringae]
Length = 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPECRYLPNGTPVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLHKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|302130268|ref|ZP_07256258.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|421497465|ref|ZP_15944633.1| ssb [Aeromonas media WS]
gi|407183530|gb|EKE57419.1| ssb [Aeromonas media WS]
Length = 191
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|315500085|ref|YP_004088888.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
gi|315418097|gb|ADU14737.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
Length = 172
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + L SG V ++ T ++ E + TE WHR
Sbjct: 5 VNKVIIIGNLGKDPEIRTLNSGERVANLTVATSEQWRDKMTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGTYLIF 198
V ++ + L + ++L GST+Y+EG+L+ + + D G+ + EI ++R NG +
Sbjct: 57 VVIFNDNLAKIAEQYLRKGSTVYLEGSLQTRKWTDQ-QGVEKYTTEIVLQRFNGNLTLL 114
>gi|294649671|ref|ZP_06727083.1| single-stranded DNA-binding protein (controls activity of RecBCD
nuclease) [Acinetobacter haemolyticus ATCC 19194]
gi|292824450|gb|EFF83241.1| single-stranded DNA-binding protein (controls activity of RecBCD
nuclease) [Acinetobacter haemolyticus ATCC 19194]
Length = 108
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
P + KAIL+G +G+ P K +G +T FS+ T ++ E + TE W
Sbjct: 2 PNVNKAILMGVLGRDPETKNFPNGGIITTFSIATTEQWKDKTTGERKEATE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
HR++ RL + K+L GS Y+EG+L + + D G+ R I E+
Sbjct: 54 HRIAT-SNRLAEIASKYLKKGSKAYIEGSLRTRKWKDQ-NGVDREIVEV 100
>gi|148549342|ref|YP_001269444.1| single-strand binding protein [Pseudomonas putida F1]
gi|148513400|gb|ABQ80260.1| single-strand binding protein [Pseudomonas putida F1]
Length = 165
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLSNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NGT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLL 111
>gi|330828125|ref|YP_004391077.1| Single-stranded DNA-binding protein [Aeromonas veronii B565]
gi|406674618|ref|ZP_11081812.1| single-strand binding protein [Aeromonas veronii AMC35]
gi|423203409|ref|ZP_17189987.1| single-strand binding protein [Aeromonas veronii AER39]
gi|423211186|ref|ZP_17197739.1| single-strand binding protein [Aeromonas veronii AER397]
gi|328803261|gb|AEB48460.1| Single-stranded DNA-binding protein [Aeromonas veronii B565]
gi|404613153|gb|EKB10189.1| single-strand binding protein [Aeromonas veronii AER39]
gi|404613781|gb|EKB10794.1| single-strand binding protein [Aeromonas veronii AER397]
gi|404628621|gb|EKB25396.1| single-strand binding protein [Aeromonas veronii AMC35]
Length = 195
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQD-QSGQERYTTEVLV 104
>gi|85715496|ref|ZP_01046477.1| single-strand DNA-binding protein [Nitrobacter sp. Nb-311A]
gi|85697691|gb|EAQ35567.1| single-strand DNA-binding protein [Nitrobacter sp. Nb-311A]
Length = 163
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDRTSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L VV ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVVEQYLKKGSKVYIEGQLQTRKWTD 91
>gi|425084517|ref|ZP_18487612.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405596784|gb|EKB70115.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
Length = 180
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTMQML 113
>gi|416029203|ref|ZP_11572044.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320326953|gb|EFW82970.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 201
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWADKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|188581452|ref|YP_001924897.1| single-strand binding protein [Methylobacterium populi BJ001]
gi|179344950|gb|ACB80362.1| single-strand binding protein [Methylobacterium populi BJ001]
Length = 183
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLASGDPVVNLRIATSESWKDKMSGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y E L V ++L GS +Y+EG L+ + + D +G + E+ ++R
Sbjct: 57 VVIYNENLARVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQR 106
>gi|441462337|gb|AGC34626.1| putative single-stranded DNA-binding protein [Pseudomonas phage
H66]
Length = 165
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + SG+ VT SL T +++ + + TE WH
Sbjct: 4 GVNKVILVGHLGQDPDARSTPSGKAVTSLSLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV ++ RL + ++L GS +Y+EG+L + +
Sbjct: 56 RVVLFG-RLAEIAAQYLRKGSQVYIEGSLRTRKWQ 89
>gi|299768442|ref|YP_003730468.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter oleivorans DR1]
gi|298698530|gb|ADI89095.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter oleivorans DR1]
Length = 196
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|71729330|gb|EAO31446.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 147
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + D TG R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRY----DKFTGQERYVTEI 97
>gi|385233085|ref|YP_005794427.1| ssDNA-binding protein [Ketogulonicigenium vulgare WSH-001]
gi|343461996|gb|AEM40431.1| Single-stranded DNA-binding protein [Ketogulonicigenium vulgare
WSH-001]
Length = 195
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +G V + T +R E + TE WH
Sbjct: 25 VNKVILIGNLGRDPEVRSFPNGGKVVNLRIATSETWRDRNSGERKERTE--------WHS 76
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E LG + K+L GS +Y+EG LE + + D G R E+ +R
Sbjct: 77 VAIFSEPLGNIAEKYLRKGSKVYLEGQLETRKWQDQ-AGADRYSTEVVLR 125
>gi|170750135|ref|YP_001756395.1| single-strand binding protein [Methylobacterium radiotolerans JCM
2831]
gi|170656657|gb|ACB25712.1| single-strand binding protein [Methylobacterium radiotolerans JCM
2831]
Length = 186
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y + L V ++L GS +Y+EG L+ + + D +G+ + E+ ++R
Sbjct: 57 VVIYNDNLARVAEQYLRKGSKVYIEGQLQTRKWTDN-SGVEKYTTEVVLQR 106
>gi|389877424|ref|YP_006370989.1| single-strand DNA binding protein [Tistrella mobilis KA081020-065]
gi|388528208|gb|AFK53405.1| single-strand DNA binding protein [Tistrella mobilis KA081020-065]
Length = 213
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + + G + ++ T +R+ E TE WHRV
Sbjct: 7 KVILIGNLGRDPEVRSTQDGMKIVNLAVATSETWRDRQSGERRERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
++ ERL V K L GS +YVEG L+ + + D
Sbjct: 59 IFNERLAEVAEKFLRKGSKVYVEGALQTRKWTD 91
>gi|347735637|ref|ZP_08868470.1| single stranded DNA-binding protein [Azospirillum amazonense Y2]
gi|346921093|gb|EGY01932.1| single stranded DNA-binding protein [Azospirillum amazonense Y2]
Length = 206
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + +++G V + T +R E + T QWH+V
Sbjct: 24 KVILIGNLGKEPEVRSMQNGGKVCNLRIATSETWKDRNSGERQERT--------QWHQVV 75
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
++ E L GV + L GS +Y+EG LE + + D +G + E+ +R
Sbjct: 76 IFNEALIGVAERFLKKGSKVYIEGQLETRKWTDQ-SGQEKYTTEVVLR 122
>gi|412342147|ref|YP_006973660.1| single-strand binding protein [Klebsiella pneumoniae]
gi|414086027|ref|YP_006973875.1| ssb [Klebsiella pneumoniae]
gi|410475088|gb|AFV70326.1| single-strand binding protein [Klebsiella pneumoniae]
gi|410475303|gb|AFV70540.1| ssb [Klebsiella pneumoniae]
Length = 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 113
>gi|418528298|ref|ZP_13094248.1| single-strand binding protein [Comamonas testosteroni ATCC 11996]
gi|371454674|gb|EHN67676.1| single-strand binding protein [Comamonas testosteroni ATCC 11996]
Length = 182
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T +R ++N E NR A +WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIAT----TDR--WRDKNTGE--NREATEWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +L +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGKLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|332560220|ref|ZP_08414542.1| single-stranded DNA-binding protein [Rhodobacter sphaeroides WS8N]
gi|332277932|gb|EGJ23247.1| single-stranded DNA-binding protein [Rhodobacter sphaeroides WS8N]
Length = 173
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|262373715|ref|ZP_06066993.1| single-stranded DNA-binding protein [Acinetobacter junii SH205]
gi|262311468|gb|EEY92554.1| single-stranded DNA-binding protein [Acinetobacter junii SH205]
Length = 194
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|163793153|ref|ZP_02187129.1| single-strand DNA binding protein [alpha proteobacterium BAL199]
gi|159181799|gb|EDP66311.1| single-strand DNA binding protein [alpha proteobacterium BAL199]
Length = 206
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G + F+L T ++ E TE WHR
Sbjct: 28 VNKVILVGNLGRDPEVRTTQDGTKIVNFTLATSENWRDKSSGERRERTE--------WHR 79
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E L + ++L GS++YVEG L+ + + D G R E+ ++R
Sbjct: 80 VVIFNENLARIAEQYLRKGSSVYVEGALQTRKWTDK-DGQERYTTEVVLQR 129
>gi|62290017|ref|YP_221810.1| ssDNA-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|82699945|ref|YP_414519.1| single-strand binding protein [Brucella melitensis biovar Abortus
2308]
gi|189024258|ref|YP_001935026.1| ssDNA-binding protein [Brucella abortus S19]
gi|237815526|ref|ZP_04594523.1| single-strand binding protein [Brucella abortus str. 2308 A]
gi|260546571|ref|ZP_05822310.1| single-stranded DNA-binding protein [Brucella abortus NCTC 8038]
gi|260754846|ref|ZP_05867194.1| helix-destabilizing protein [Brucella abortus bv. 6 str. 870]
gi|260758063|ref|ZP_05870411.1| helix-destabilizing protein [Brucella abortus bv. 4 str. 292]
gi|260761887|ref|ZP_05874230.1| helix-destabilizing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260883858|ref|ZP_05895472.1| single-stranded DNA-binding protein [Brucella abortus bv. 9 str.
C68]
gi|297248418|ref|ZP_06932136.1| single-stranded DNA-binding protein [Brucella abortus bv. 5 str.
B3196]
gi|376273165|ref|YP_005151743.1| single-stranded DNA-binding protein [Brucella abortus A13334]
gi|423166793|ref|ZP_17153496.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI435a]
gi|423170833|ref|ZP_17157508.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI474]
gi|423173085|ref|ZP_17159756.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI486]
gi|423178222|ref|ZP_17164866.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI488]
gi|423180263|ref|ZP_17166904.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI010]
gi|423183395|ref|ZP_17170032.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI016]
gi|423185665|ref|ZP_17172279.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI021]
gi|423188801|ref|ZP_17175411.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI259]
gi|88941989|sp|Q2YPX7.1|SSB_BRUA2 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|88941990|sp|P0C118.1|SSB_BRUAB RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|144126|gb|AAA16818.1| single stranded DNA binding protein [Brucella abortus]
gi|62196149|gb|AAX74449.1| single-stranded DNA-binding protein family [Brucella abortus bv. 1
str. 9-941]
gi|82616046|emb|CAJ11082.1| Single-strand binding protein [Brucella melitensis biovar Abortus
2308]
gi|189019830|gb|ACD72552.1| Single-strand binding protein [Brucella abortus S19]
gi|237788824|gb|EEP63035.1| single-strand binding protein [Brucella abortus str. 2308 A]
gi|260095621|gb|EEW79498.1| single-stranded DNA-binding protein [Brucella abortus NCTC 8038]
gi|260668381|gb|EEX55321.1| helix-destabilizing protein [Brucella abortus bv. 4 str. 292]
gi|260672319|gb|EEX59140.1| helix-destabilizing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260674954|gb|EEX61775.1| helix-destabilizing protein [Brucella abortus bv. 6 str. 870]
gi|260873386|gb|EEX80455.1| single-stranded DNA-binding protein [Brucella abortus bv. 9 str.
C68]
gi|297175587|gb|EFH34934.1| single-stranded DNA-binding protein [Brucella abortus bv. 5 str.
B3196]
gi|363400771|gb|AEW17741.1| single-stranded DNA-binding protein [Brucella abortus A13334]
gi|374539411|gb|EHR10915.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI474]
gi|374543024|gb|EHR14508.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI435a]
gi|374543640|gb|EHR15122.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI486]
gi|374545461|gb|EHR16922.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI488]
gi|374548827|gb|EHR20274.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI010]
gi|374549458|gb|EHR20901.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI016]
gi|374558459|gb|EHR29852.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI259]
gi|374559756|gb|EHR31141.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI021]
Length = 168
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E L V ++L G+ +Y+EG L+ + + D G R +EI +++
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSKEIVLQK 106
>gi|222874341|gb|EEF11472.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|424914243|ref|ZP_18337607.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850419|gb|EJB02940.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 178
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G +G P ++ +SG V F+L T +R E + T+ WH +
Sbjct: 7 KVCLLGNLGADPEIRRTQSGNAVANFNLATSESWRDRTTGEKKEKTD--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
V+ E L V ++L GS +Y+EG L+ + + D G R + E+ ++ + L+
Sbjct: 59 VWNEGLAKVCEQYLRKGSKVYIEGKLQTRKWQDQ-DGKDRYVTEVILQFDAKLLML 113
>gi|422321462|ref|ZP_16402509.1| single-stranded DNA-binding protein [Achromobacter xylosoxidans
C54]
gi|317403631|gb|EFV84119.1| single-stranded DNA-binding protein [Achromobacter xylosoxidans
C54]
Length = 151
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
P + K ILVG +G++P + G V S+ T +R E TE W
Sbjct: 2 PSVNKVILVGNLGRNPDIRYSPDGAAVCSMSIATTSTWKDRASGERREETE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
HRV +Y RL + ++L G ++Y+EG L+ + + D TG R EI
Sbjct: 54 HRVVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGGDRYSTEI 101
>gi|402759012|ref|ZP_10861268.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. NCTC 7422]
Length = 198
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWMDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|380083314|ref|YP_005351329.1| single-strand binding protein [Klebsiella pneumoniae]
gi|356596106|gb|AET17156.1| Single-strand binding protein [Klebsiella pneumoniae]
Length = 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGKNGTLQML 113
>gi|374325458|ref|YP_005083655.1| putative single strand binding protein Ssb [Pseudomonas sp. MC1]
gi|359392982|gb|AEV45858.1| putative single strand binding protein Ssb [Pseudomonas sp. MC1]
Length = 169
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEKWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|291288967|ref|YP_003517470.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|290792098|gb|ADD63424.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
Length = 220
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 45 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 96
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 97 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 153
>gi|221069787|ref|ZP_03545892.1| single-strand binding protein [Comamonas testosteroni KF-1]
gi|220714810|gb|EED70178.1| single-strand binding protein [Comamonas testosteroni KF-1]
Length = 182
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T +R ++N E NR A +WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIAT----TDR--WRDKNTGE--NREATEWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +L +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGKLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|389681721|ref|ZP_10173065.1| single-strand DNA-binding protein [Pseudomonas chlororaphis O6]
gi|425901849|ref|ZP_18878440.1| single-strand DNA-binding protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388554256|gb|EIM17505.1| single-strand DNA-binding protein [Pseudomonas chlororaphis O6]
gi|397892802|gb|EJL09278.1| single-strand DNA-binding protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 170
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|300724464|ref|YP_003713785.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
gi|297631002|emb|CBJ91684.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
Length = 170
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G TV SL T +++ E TE WH
Sbjct: 5 GINKVILVGFLGQEPEIRYLPTGGTVATLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG+ +
Sbjct: 57 RVVIFG-KLAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQML 113
>gi|264680894|ref|YP_003280804.1| single-strand binding protein [Comamonas testosteroni CNB-2]
gi|299530884|ref|ZP_07044298.1| single-strand binding protein [Comamonas testosteroni S44]
gi|262211410|gb|ACY35508.1| single-strand binding protein [Comamonas testosteroni CNB-2]
gi|298721105|gb|EFI62048.1| single-strand binding protein [Comamonas testosteroni S44]
Length = 182
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T +R ++N E NR A +WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIAT----TDR--WRDKNTGE--NREATEWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +L +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGKLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|402698216|ref|ZP_10846195.1| protein Ssb [Pseudomonas fragi A22]
Length = 177
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|310815567|ref|YP_003963531.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|308754302|gb|ADO42231.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
Length = 208
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +G V + T +R E + TE WH
Sbjct: 38 VNKVILIGNLGRDPEVRSFPNGGKVVNLRIATSETWRDRNSGERKERTE--------WHS 89
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E LG + K+L GS +Y+EG LE + + D G R E+ +R
Sbjct: 90 VAIFSEPLGNIAEKYLRKGSKVYLEGQLETRKWQDQ-AGADRYSTEVVLR 138
>gi|304413599|ref|ZP_07395043.1| single-stranded DNA-binding protein [Candidatus Regiella
insecticola LSR1]
gi|304283690|gb|EFL92084.1| single-stranded DNA-binding protein [Candidatus Regiella
insecticola LSR1]
Length = 177
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G VT +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVTNITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGTLQTRKWQDQ-SGQDRYTTEVVVNVGGTMQML 113
>gi|300023690|ref|YP_003756301.1| single-strand binding protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299525511|gb|ADJ23980.1| single-strand binding protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 173
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG+ P ++ + GR + SL T +++ E + TE WHR
Sbjct: 5 VNKVILVGNVGKDPEIRRTQDGRPIANLSLATSETWRDKQTGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L VV +++ G+ +Y+EG L+ + + D
Sbjct: 57 VVIFSEPLCKVVEQYVKKGAKLYIEGALQTRKWTD 91
>gi|410686345|ref|YP_006961618.1| single-stranded binding protein [Pseudomonas savastanoi]
gi|298160014|gb|EFI01050.1| Single-stranded DNA-binding protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|374081538|emb|CBZ40024.1| single-stranded binding protein [Pseudomonas savastanoi]
Length = 190
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDVRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|37528177|ref|NP_931522.1| single-strand DNA-binding protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787614|emb|CAE16721.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 178
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQERYTTEVVVNMGGTMQML 113
>gi|398891092|ref|ZP_10644532.1| single stranded DNA-binding protein [Pseudomonas sp. GM55]
gi|398187327|gb|EJM74671.1| single stranded DNA-binding protein [Pseudomonas sp. GM55]
Length = 171
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGT 107
>gi|388547649|ref|ZP_10150911.1| single-stranded DNA-binding protein [Pseudomonas sp. M47T1]
gi|388274249|gb|EIK93849.1| single-stranded DNA-binding protein [Pseudomonas sp. M47T1]
Length = 172
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|421604143|ref|ZP_16046387.1| single-stranded DNA-binding protein [Bradyrhizobium sp. CCGE-LA001]
gi|404263748|gb|EJZ29184.1| single-stranded DNA-binding protein [Bradyrhizobium sp. CCGE-LA001]
Length = 164
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L +V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFSEPLCKIVEQYLKKGAKVYIEGALQTRKYTD 91
>gi|291391222|ref|XP_002712158.1| PREDICTED: single-stranded DNA binding protein 1 [Oryctolagus
cuniculus]
Length = 148
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + +R +NE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSR---DNETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 KWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYMD 121
>gi|289651432|ref|ZP_06482775.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 201
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWADKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|15838245|ref|NP_298933.1| single-stranded DNA-binding protein [Xylella fastidiosa 9a5c]
gi|9106701|gb|AAF84453.1|AE003991_5 single-stranded DNA binding protein [Xylella fastidiosa 9a5c]
Length = 151
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGDTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRYDKFTGND---GQERYVTEI 100
>gi|424667483|ref|ZP_18104508.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
Ab55555]
gi|401069097|gb|EJP77620.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
Ab55555]
gi|456735469|gb|EMF60220.1| Single-stranded DNA-binding protein [Stenotrophomonas maltophilia
EPM1]
Length = 190
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|386717524|ref|YP_006183850.1| ssDNA-binding protein [Stenotrophomonas maltophilia D457]
gi|384077086|emb|CCH11672.1| Single-stranded DNA-binding protein [Stenotrophomonas maltophilia
D457]
Length = 191
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|344206443|ref|YP_004791584.1| single-strand binding protein [Stenotrophomonas maltophilia JV3]
gi|343777805|gb|AEM50358.1| single-strand binding protein [Stenotrophomonas maltophilia JV3]
Length = 186
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|254522053|ref|ZP_05134108.1| single-stranded DNA binding protein [Stenotrophomonas sp. SKA14]
gi|219719644|gb|EED38169.1| single-stranded DNA binding protein [Stenotrophomonas sp. SKA14]
Length = 196
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|206579111|ref|YP_002241000.1| single-stranded DNA-binding protein [Klebsiella pneumoniae 342]
gi|288937646|ref|YP_003441705.1| single-strand binding protein [Klebsiella variicola At-22]
gi|290512385|ref|ZP_06551752.1| single-stranded DNA-binding protein [Klebsiella sp. 1_1_55]
gi|206568169|gb|ACI09945.1| single-stranded DNA-binding protein [Klebsiella pneumoniae 342]
gi|288892355|gb|ADC60673.1| single-strand binding protein [Klebsiella variicola At-22]
gi|289775380|gb|EFD83381.1| single-stranded DNA-binding protein [Klebsiella sp. 1_1_55]
Length = 175
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|169794714|ref|YP_001712507.1| single-strand binding protein (helix-destabilizing protein)
[Acinetobacter baumannii AYE]
gi|417563263|ref|ZP_12214142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|421198782|ref|ZP_15655947.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|421621117|ref|ZP_16062041.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|421641424|ref|ZP_16081966.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|421646656|ref|ZP_16087101.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|421700403|ref|ZP_16139919.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|169147641|emb|CAM85504.1| putative Single-strand binding protein (Helix-destabilizing
protein) [Acinetobacter baumannii AYE]
gi|395525845|gb|EJG13934.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|395565678|gb|EJG27325.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|404570110|gb|EKA75188.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|408515219|gb|EKK16808.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|408517289|gb|EKK18834.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|408698802|gb|EKL44289.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
Length = 117
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G +P+ K+ ++G + FS+ T ++R + TE WH
Sbjct: 3 GINKVILVGMLGANPIPKQFQNGGSYAQFSIATSEKYQDKRTGDWIENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RI-VAHNRLGEIACQFLKKGSKVYIEGSLHTRKWTD 89
>gi|393770486|ref|ZP_10358975.1| single-strand binding protein [Methylobacterium sp. GXF4]
gi|392724073|gb|EIZ81449.1| single-strand binding protein [Methylobacterium sp. GXF4]
Length = 189
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y + L V ++L GS +Y+EG L+ + + D +G+ + E+ ++R
Sbjct: 57 VVIYNDNLARVAEQYLRKGSKVYIEGQLQTRKWTDN-SGVEKYTTEVVLQR 106
>gi|423123270|ref|ZP_17110953.1| single-strand binding protein [Klebsiella oxytoca 10-5246]
gi|376391097|gb|EHT03778.1| single-strand binding protein [Klebsiella oxytoca 10-5246]
Length = 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGATRYVTEVLVGQNGTMQML 113
>gi|227356904|ref|ZP_03841283.1| single-stranded DNA-binding protein [Proteus mirabilis ATCC 29906]
gi|227162974|gb|EEI47919.1| single-stranded DNA-binding protein [Proteus mirabilis ATCC 29906]
Length = 175
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +GQ P + L +G VT +L T +++ E + V+WH
Sbjct: 5 GVNKVLLIGHLGQDPEMRYLPNGDAVTNITLATSDSWKDKQSGE--------TKERVEWH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G R E+ + NG+ +
Sbjct: 57 RVVIF-GKLAEIAGEYLHKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVNINGSMQML 113
>gi|190573212|ref|YP_001971057.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
K279a]
gi|190011134|emb|CAQ44743.1| putative single-strand binding protein [Stenotrophomonas
maltophilia K279a]
Length = 190
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|91977225|ref|YP_569884.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
BisB5]
gi|91683681|gb|ABE39983.1| single-strand binding protein [Rhodopseudomonas palustris BisB5]
Length = 169
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSETWRDRASGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ E L + ++L GS IY+EG L+ + + D +G R E+ ++ + L
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKIYLEGQLQTRKWTDQ-SGAERYSTEVVLQNFNSVLTML 114
>gi|294637733|ref|ZP_06716008.1| single-strand binding protein [Edwardsiella tarda ATCC 23685]
gi|451966588|ref|ZP_21919840.1| single-stranded DNA-binding protein [Edwardsiella tarda NBRC
105688]
gi|291089081|gb|EFE21642.1| single-strand binding protein [Edwardsiella tarda ATCC 23685]
gi|451314505|dbj|GAC65202.1| single-stranded DNA-binding protein [Edwardsiella tarda NBRC
105688]
Length = 184
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSESWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV++Y +L + ++L GS +YVEG L + + D +G R E+ + NG+ +
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYVEGQLRTRKWQDQ-SGQDRYTTEVVVDINGSMQML 113
>gi|389776750|ref|ZP_10194146.1| single stranded DNA-binding protein [Rhodanobacter spathiphylli
B39]
gi|388436342|gb|EIL93210.1| single stranded DNA-binding protein [Rhodanobacter spathiphylli
B39]
Length = 177
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P + SG ++ FSL T +++ E + TE WH
Sbjct: 4 GINKVILVGNLGSDPELRSTGSGTSICSFSLATSESWTDKQSGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
R+ ++ RLG + ++L G +Y+EG++ F
Sbjct: 56 RIKIFG-RLGEIAAEYLKKGRQVYIEGSIRTDKF 88
>gi|374263385|ref|ZP_09621933.1| single strand binding protein [Legionella drancourtii LLAP12]
gi|363535975|gb|EHL29421.1| single strand binding protein [Legionella drancourtii LLAP12]
Length = 159
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSESWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGQYVRKGSKLYVEGSLRTRKWQD 90
>gi|126461213|ref|YP_001042327.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638194|ref|YP_002524456.1| ssDNA-binding protein [Rhodobacter sphaeroides KD131]
gi|429207774|ref|ZP_19199030.1| Single-stranded DNA-binding protein [Rhodobacter sp. AKP1]
gi|126102877|gb|ABN75555.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|221158975|gb|ACL99954.1| Single-stranded DNA-binding protein [Rhodobacter sphaeroides KD131]
gi|428189167|gb|EKX57723.1| Single-stranded DNA-binding protein [Rhodobacter sp. AKP1]
Length = 173
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|393720329|ref|ZP_10340256.1| single-stranded DNA-binding protein (SSB) [Sphingomonas echinoides
ATCC 14820]
Length = 183
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P + ++G V + T ++ E + TE WH V+
Sbjct: 8 KVIIVGNLGRDPESRTFQNGGKVVNLRIATSETWKDKNTGERKEQTE--------WHSVA 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
++ E LGGV ++L GS +Y+EG L+ + + D
Sbjct: 60 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA 93
>gi|270157880|ref|ZP_06186537.1| single-stranded DNA-binding protein [Legionella longbeachae D-4968]
gi|289163858|ref|YP_003453996.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella longbeachae NSW150]
gi|269989905|gb|EEZ96159.1| single-stranded DNA-binding protein [Legionella longbeachae D-4968]
gi|288857031|emb|CBJ10846.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella longbeachae NSW150]
Length = 157
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VG P + L +G VT S+ T ++ E + TE WH
Sbjct: 4 GINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSEAWKDKATGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYVRKGSKLYVEGSLRTRKWQD 90
>gi|424864472|ref|ZP_18288375.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
gi|400759218|gb|EJP73400.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
Length = 146
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQSAVANLSVATTESWKDKETGEMRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV VY +L +V K+L GS +YVEG L+ + + D +G R EI
Sbjct: 56 RV-VYFGKLAEIVEKYLDKGSKVYVEGKLQTRKWQDK-SGADRWTTEI 101
>gi|423207263|ref|ZP_17193819.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
gi|404620330|gb|EKB17227.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
Length = 175
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|301631445|ref|XP_002944808.1| PREDICTED: single-stranded DNA-binding protein-like [Xenopus
(Silurana) tropicalis]
Length = 171
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I+VG +G+ P + SG +V S+ T ++ EN+ TE WHR
Sbjct: 4 INKVIIVGHIGRDPEMRTFPSGDSVANVSIATTDRWRDKNTGENKETTE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V+ + RL +V ++L GS +YVEG+L + + D +G+ + I E+
Sbjct: 56 VT-FSGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQ-SGVEKFITEV 100
>gi|378976117|ref|YP_005229748.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|365803960|gb|AEW92181.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
Length = 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 113
>gi|152972922|ref|YP_001338068.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238892532|ref|YP_002917266.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|330004955|ref|ZP_08305070.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
gi|365143200|ref|ZP_09348131.1| single-stranded DNA-binding protein [Klebsiella sp. 4_1_44FAA]
gi|378976442|ref|YP_005224583.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386032633|ref|YP_005952546.1| single-stranded DNA-binding protein [Klebsiella pneumoniae KCTC
2242]
gi|402782952|ref|YP_006638498.1| ssDNA-binding protein [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419974829|ref|ZP_14490245.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980645|ref|ZP_14495928.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985802|ref|ZP_14500940.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991578|ref|ZP_14506542.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997587|ref|ZP_14512382.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003924|ref|ZP_14518566.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420009443|ref|ZP_14523926.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420015915|ref|ZP_14530212.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420021212|ref|ZP_14535394.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028054|ref|ZP_14542038.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420032642|ref|ZP_14546455.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420038183|ref|ZP_14551832.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044223|ref|ZP_14557705.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420049942|ref|ZP_14563246.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420055536|ref|ZP_14568702.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420060144|ref|ZP_14573146.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420067194|ref|ZP_14579989.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071837|ref|ZP_14584480.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078458|ref|ZP_14590915.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420082911|ref|ZP_14595201.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424828439|ref|ZP_18253167.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424935566|ref|ZP_18353938.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425078864|ref|ZP_18481967.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425079386|ref|ZP_18482483.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425089496|ref|ZP_18492589.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425094207|ref|ZP_18497290.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428935418|ref|ZP_19008894.1| ssDNA-binding protein [Klebsiella pneumoniae JHCK1]
gi|150957771|gb|ABR79801.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238544848|dbj|BAH61199.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328536468|gb|EGF62814.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
gi|339759761|gb|AEJ95981.1| single-stranded DNA-binding protein [Klebsiella pneumoniae KCTC
2242]
gi|363649745|gb|EHL88847.1| single-stranded DNA-binding protein [Klebsiella sp. 4_1_44FAA]
gi|364515853|gb|AEW58981.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397344796|gb|EJJ37926.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397345318|gb|EJJ38443.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350350|gb|EJJ43439.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397362423|gb|EJJ55073.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363290|gb|EJJ55931.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397367611|gb|EJJ60221.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397375775|gb|EJJ68054.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397381299|gb|EJJ73471.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387029|gb|EJJ79079.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392198|gb|EJJ84002.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397397129|gb|EJJ88810.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397404588|gb|EJJ96089.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397412225|gb|EJK03464.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397412359|gb|EJK03594.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397421643|gb|EJK12649.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397428541|gb|EJK19278.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397434283|gb|EJK24920.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397439873|gb|EJK30300.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397444800|gb|EJK35062.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397451680|gb|EJK41760.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543795|gb|AFQ67944.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405589665|gb|EKB63230.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405599937|gb|EKB73112.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405607898|gb|EKB80850.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610080|gb|EKB82905.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407809753|gb|EKF81004.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414705844|emb|CCN27548.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426300619|gb|EKV62895.1| ssDNA-binding protein [Klebsiella pneumoniae JHCK1]
Length = 174
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGTMQML 113
>gi|194364811|ref|YP_002027421.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
R551-3]
gi|194347615|gb|ACF50738.1| single-strand binding protein [Stenotrophomonas maltophilia R551-3]
Length = 191
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|399006310|ref|ZP_10708837.1| single stranded DNA-binding protein [Pseudomonas sp. GM17]
gi|398122476|gb|EJM12068.1| single stranded DNA-binding protein [Pseudomonas sp. GM17]
Length = 170
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|327413073|emb|CAX68102.1| single-stranded dna-binding protein [Salmonella enterica subsp.
enterica]
Length = 179
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + + VT SL T +++ E + TE WH
Sbjct: 5 GINKVILVGHLGQDPEVRYMPNSTAVTGLSLATSESWRDKQTGEMKENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EG L + + D G+ R E+ + NGT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDN-AGVDRWTTEVVVGINGT 109
>gi|163851666|ref|YP_001639709.1| single-strand binding protein [Methylobacterium extorquens PA1]
gi|218530472|ref|YP_002421288.1| single-strand binding protein [Methylobacterium extorquens CM4]
gi|163663271|gb|ABY30638.1| single-strand binding protein [Methylobacterium extorquens PA1]
gi|218522775|gb|ACK83360.1| single-strand binding protein [Methylobacterium extorquens CM4]
Length = 189
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y + L V ++L GS +Y+EG L+ + + D +G + E+ ++R
Sbjct: 57 VVIYNDNLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQR 106
>gi|28867884|ref|NP_790503.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213969244|ref|ZP_03397382.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato T1]
gi|301381751|ref|ZP_07230169.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato Max13]
gi|302061049|ref|ZP_07252590.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato K40]
gi|302189308|ref|ZP_07265981.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae 642]
gi|422591734|ref|ZP_16666372.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422653841|ref|ZP_16716598.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|422659573|ref|ZP_16721997.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|440723613|ref|ZP_20903975.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34876]
gi|440726933|ref|ZP_20907176.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34881]
gi|37999394|sp|Q889U1.1|SSB_PSESM RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|28851120|gb|AAO54198.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213925922|gb|EEB59479.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato T1]
gi|330879412|gb|EGH13561.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330966881|gb|EGH67141.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331018190|gb|EGH98246.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|440359390|gb|ELP96702.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34876]
gi|440364983|gb|ELQ02099.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34881]
Length = 189
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|377579671|ref|ZP_09808635.1| single-stranded DNA-binding protein [Escherichia hermannii NBRC
105704]
gi|377538988|dbj|GAB53800.1| single-stranded DNA-binding protein [Escherichia hermannii NBRC
105704]
Length = 179
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYLPSGGAVANFTLATSDSWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIGGVM 111
>gi|283787210|ref|YP_003367075.1| single-stranded binding protein [Citrobacter rodentium ICC168]
gi|282950664|emb|CBG90338.1| single-stranded binding protein [Citrobacter rodentium ICC168]
Length = 176
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L SG V F+L T +++ E + TE WH
Sbjct: 5 GINKVILVGNLGQDPEVRYLPSGGAVANFTLATSDSWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
R+ ++ +L V ++L GS +Y+EG L + + D +G R EI + + G +
Sbjct: 57 RIVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIGGVM 111
>gi|398848607|ref|ZP_10605416.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
gi|398247862|gb|EJN33296.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
Length = 165
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NGT +
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLL 111
>gi|374703948|ref|ZP_09710818.1| single-strand binding protein [Pseudomonas sp. S9]
Length = 165
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|334345916|ref|YP_004554468.1| single-strand binding protein [Sphingobium chlorophenolicum L-1]
gi|334102538|gb|AEG49962.1| single-strand binding protein [Sphingobium chlorophenolicum L-1]
Length = 190
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGADPEVRSFQNGGKVCNIRIATSETWKDRNSGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+++ E L GV ++L GS +YVEG L+ + + D
Sbjct: 57 VAIFSEGLAGVAERYLRKGSKVYVEGKLQTRKWQD 91
>gi|152973541|ref|YP_001338592.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|419977188|ref|ZP_14492556.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419982910|ref|ZP_14498147.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419988705|ref|ZP_14503774.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419994502|ref|ZP_14509397.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|420000278|ref|ZP_14515017.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420006000|ref|ZP_14520595.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420011774|ref|ZP_14526203.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420017665|ref|ZP_14531923.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420023339|ref|ZP_14537465.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420029086|ref|ZP_14543026.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420034866|ref|ZP_14548624.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420040530|ref|ZP_14554121.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420046246|ref|ZP_14559679.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420052027|ref|ZP_14565286.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420057812|ref|ZP_14570922.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420063401|ref|ZP_14576326.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420069207|ref|ZP_14581949.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420074960|ref|ZP_14587537.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420080812|ref|ZP_14593211.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420086549|ref|ZP_14598692.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421912278|ref|ZP_16342005.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916202|ref|ZP_16345785.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|425079177|ref|ZP_18482278.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425089576|ref|ZP_18492667.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|428943382|ref|ZP_19016286.1| single-strand binding protein [Klebsiella pneumoniae VA360]
gi|442557618|ref|YP_007366572.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|150958333|gb|ABR80362.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|359730413|gb|AEV55158.1| single-strand binding family protein [Klebsiella pneumoniae]
gi|397338811|gb|EJJ32114.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397339124|gb|EJJ32394.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397339360|gb|EJJ32612.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397356060|gb|EJJ48939.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397356231|gb|EJJ49084.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397358567|gb|EJJ51284.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397373256|gb|EJJ65706.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397374319|gb|EJJ66663.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397378593|gb|EJJ70802.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397389504|gb|EJJ81439.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397391219|gb|EJJ83091.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397396548|gb|EJJ88236.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397407119|gb|EJJ98519.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397407135|gb|EJJ98534.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397415187|gb|EJK06376.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397423727|gb|EJK14650.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397424754|gb|EJK15645.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397431577|gb|EJK22250.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397439463|gb|EJK29908.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397445419|gb|EJK35662.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405588900|gb|EKB62499.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405599106|gb|EKB72287.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|410113832|emb|CCM84630.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410121491|emb|CCM88410.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|426296837|gb|EKV59407.1| single-strand binding protein [Klebsiella pneumoniae VA360]
gi|440685666|gb|AGC23633.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae]
Length = 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQAYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 113
>gi|71735403|ref|YP_276653.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483216|ref|ZP_05637257.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|289625667|ref|ZP_06458621.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648911|ref|ZP_06480254.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|416018884|ref|ZP_11565797.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|416021775|ref|ZP_11567066.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422584588|ref|ZP_16659693.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|422597967|ref|ZP_16672234.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422640774|ref|ZP_16704200.1| single-stranded DNA-binding protein [Pseudomonas syringae Cit 7]
gi|422683108|ref|ZP_16741370.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|440742713|ref|ZP_20922036.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
gi|71555956|gb|AAZ35167.1| single-strand binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298156377|gb|EFH97475.1| Single-stranded DNA-binding protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322291|gb|EFW78385.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331949|gb|EFW87885.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330869400|gb|EGH04109.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330953164|gb|EGH53424.1| single-stranded DNA-binding protein [Pseudomonas syringae Cit 7]
gi|330988251|gb|EGH86354.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331012444|gb|EGH92500.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|440377017|gb|ELQ13674.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
Length = 187
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|422619336|ref|ZP_16688027.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|422661334|ref|ZP_16723688.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|424069637|ref|ZP_17807083.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443642053|ref|ZP_21125903.1| Single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B64]
gi|330899707|gb|EGH31126.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|330982565|gb|EGH80668.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|407994309|gb|EKG34894.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443282070|gb|ELS41075.1| Single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B64]
Length = 188
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|329850841|ref|ZP_08265686.1| single-stranded DNA-binding protein [Asticcacaulis biprosthecum
C19]
gi|328841156|gb|EGF90727.1| single-stranded DNA-binding protein [Asticcacaulis biprosthecum
C19]
Length = 169
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + L SG V ++ T ++ E + TE WHR
Sbjct: 5 VNKVILIGNLGKDPEIRTLNSGDRVANLTVATSEQWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ + L + ++L GST+Y+EG+L+ + + D +G+ + E+ +++
Sbjct: 57 VVIFNDNLAKIAEQYLRKGSTVYLEGSLQTRKWTDQ-SGVEKYSTEVVLQK 106
>gi|88608751|ref|YP_506634.1| single-strand binding protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600920|gb|ABD46388.1| single-strand binding protein [Neorickettsia sennetsu str.
Miyayama]
Length = 151
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCA-VQWH 139
I K ILVG +G+ P + + + + V FSL T EN N R + +WH
Sbjct: 2 INKVILVGNLGKDPEVRTMSNAKQVATFSLAT---------TENWNDKNTGERVSKTEWH 52
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+V V+ E L V+ ++ G+ +Y+EG+L+ + + D G+ R E+ +
Sbjct: 53 QVVVFNEPLIKVISNYVNKGTRLYIEGSLQTRKWTDN-NGIERYTTEVVL 101
>gi|70732853|ref|YP_262620.1| single-stranded DNA-binding protein [Pseudomonas protegens Pf-5]
gi|68347152|gb|AAY94758.1| single-strand DNA-binding protein [Pseudomonas protegens Pf-5]
Length = 169
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|213967429|ref|ZP_03395577.1| single-strand DNA-binding protein [Pseudomonas syringae pv. tomato
T1]
gi|301382128|ref|ZP_07230546.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato Max13]
gi|302058968|ref|ZP_07250509.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato K40]
gi|213927730|gb|EEB61277.1| single-strand DNA-binding protein [Pseudomonas syringae pv. tomato
T1]
Length = 163
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 3 GVNKVILVGTCGQDPDVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 55 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 110
>gi|440733949|ref|ZP_20913583.1| single-stranded DNA-binding protein, partial [Xanthomonas
translucens DAR61454]
gi|440357967|gb|ELP95431.1| single-stranded DNA-binding protein, partial [Xanthomonas
translucens DAR61454]
Length = 135
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG++
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSI 82
>gi|414162520|ref|ZP_11418767.1| single-stranded DNA-binding protein [Afipia felis ATCC 53690]
gi|410880300|gb|EKS28140.1| single-stranded DNA-binding protein [Afipia felis ATCC 53690]
Length = 161
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPDVRRTQDGRPIVNLSIATSDTWRDKNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +YVEG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYVEGALQTRKWQD 91
>gi|329998235|ref|ZP_08303007.1| single-strand binding family protein, partial [Klebsiella sp. MS
92-3]
gi|328538799|gb|EGF64876.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
Length = 198
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 23 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 74
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 75 RVVMFG-KLAEVAGEYLRKGAQAYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQML 131
>gi|240138833|ref|YP_002963308.1| ssDNA-binding protein [Methylobacterium extorquens AM1]
gi|418061910|ref|ZP_12699738.1| single-strand binding protein [Methylobacterium extorquens DSM
13060]
gi|240008805|gb|ACS40031.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
AM1]
gi|373564543|gb|EHP90644.1| single-strand binding protein [Methylobacterium extorquens DSM
13060]
Length = 189
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V +Y + L V ++L GS +Y+EG L+ + + D +G + E+ ++R
Sbjct: 57 VVIYNDNLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQR 106
>gi|410654984|ref|YP_006957501.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
salamae]
gi|389597706|gb|AFK90455.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
salamae]
Length = 184
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVASLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L G+ +Y+EG L + + D +G+ R + EI + +NGT +
Sbjct: 57 RVVLFG-KLVEIASEYLRKGAQVYIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQML 113
>gi|261819945|ref|YP_003258051.1| single-stranded DNA-binding protein [Pectobacterium wasabiae
WPP163]
gi|261603958|gb|ACX86444.1| single-strand binding protein [Pectobacterium wasabiae WPP163]
Length = 182
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K L+G +GQ P + + +G VT ++ T +++ E + TE WH
Sbjct: 5 GVNKVTLIGFLGQDPEVRYMPNGNAVTGITMATSETWRDKQTGEEKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 RVVIF-GKLAEIAGEYLRKGSQVYIEGQLQTRKWQDS-AGVDRWTTEIVVSQRGTMQML 113
>gi|192360087|ref|YP_001981237.1| single-stranded DNA-binding protein [Cellvibrio japonicus Ueda107]
gi|190686252|gb|ACE83930.1| single-stranded DNA-binding protein [Cellvibrio japonicus Ueda107]
Length = 235
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P K + SG VT S+ T ++ + + TE WH
Sbjct: 43 GINKVILIGNIGQDPEVKYMPSGGAVTNISVATSETWKDKNTGQAQERTE--------WH 94
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV ++ RLG + ++L GS +Y+EG+L + +
Sbjct: 95 RVVLF-NRLGEIAGEYLRKGSKVYIEGSLRTRKW 127
>gi|239831868|ref|ZP_04680197.1| single-strand binding protein [Ochrobactrum intermedium LMG 3301]
gi|239824135|gb|EEQ95703.1| single-strand binding protein [Ochrobactrum intermedium LMG 3301]
Length = 195
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 29 VNKVILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGERKDRTE--------WHS 80
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 81 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 115
>gi|425744361|ref|ZP_18862419.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-323]
gi|425491205|gb|EKU57491.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-323]
Length = 191
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWMDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|385873092|gb|AFI91612.1| Single-stranded DNA-binding protein [Pectobacterium sp. SCC3193]
Length = 182
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K L+G +GQ P + + +G VT ++ T +++ E + TE WH
Sbjct: 5 GVNKVTLIGFLGQDPEVRYMPNGNAVTGITMATSETWRDKQTGEEKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 RVVIF-GKLAEIAGEYLRKGSQVYIEGQLQTRKWQDS-AGVDRWTTEIVVSQRGTMQML 113
>gi|77462337|ref|YP_351841.1| single-strand DNA binding protein [Rhodobacter sphaeroides 2.4.1]
gi|85700436|sp|Q9ZAQ8.2|SSB_RHOS4 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|77386755|gb|ABA77940.1| Single-strand DNA binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 173
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|395498931|ref|ZP_10430510.1| single-stranded DNA-binding protein [Pseudomonas sp. PAMC 25886]
gi|395797689|ref|ZP_10476977.1| single-stranded DNA-binding protein [Pseudomonas sp. Ag1]
gi|421139046|ref|ZP_15599092.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
gi|395338057|gb|EJF69910.1| single-stranded DNA-binding protein [Pseudomonas sp. Ag1]
gi|404509769|gb|EKA23693.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
Length = 172
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|417194609|ref|ZP_12015556.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|419213249|ref|ZP_13756286.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|420101129|ref|ZP_14612258.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9455]
gi|420106899|ref|ZP_14617278.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|33323524|gb|AAQ07494.1|AF503408_18 Ssb [Enterobacteria phage P7]
gi|378044325|gb|EHW06744.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|386189643|gb|EIH78404.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|394414649|gb|EJE88588.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|394417997|gb|EJE91702.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9455]
Length = 162
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G TV S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGTVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|319786424|ref|YP_004145899.1| single-strand binding protein [Pseudoxanthomonas suwonensis 11-1]
gi|317464936|gb|ADV26668.1| single-strand binding protein [Pseudoxanthomonas suwonensis 11-1]
Length = 169
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG VT L T +R +R + E +WH
Sbjct: 4 GINKVILVGNLGDDPETKYTQSGMAVTTIRLATTSVRKDRDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +LG + ++L GS YVEG++ F G R I EI
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYVEGSIRYDKFTGQ-DGQERYITEI 100
>gi|352080042|ref|ZP_08951111.1| single-strand binding protein [Rhodanobacter sp. 2APBS1]
gi|351684751|gb|EHA67820.1| single-strand binding protein [Rhodanobacter sp. 2APBS1]
Length = 165
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + SG TV FSL T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGSDPEVRSTGSGTTVCSFSLATSESWTDKQSGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
R+ ++ RLG + ++L G +Y+EG++ F
Sbjct: 56 RIKIFG-RLGEIAGEYLKKGRQVYIEGSIRTDKF 88
>gi|402844118|ref|ZP_10892495.1| single-stranded DNA-binding protein [Klebsiella sp. OBRC7]
gi|402275697|gb|EJU24837.1| single-stranded DNA-binding protein [Klebsiella sp. OBRC7]
Length = 182
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILVGHLGQDPDVRYIPNGSAVANLTLATSETWRDKQSGELRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G R + E+ + +NGT +
Sbjct: 57 RVVMF-GKLAEVAGEYLRKGAQVYIEGQLRTRNWQDE-AGTTRYVTEVLVGQNGTMQML 113
>gi|227112438|ref|ZP_03826094.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 180
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G+ R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-SGVERYTTEVVVNVGGTMQML 113
>gi|253991380|ref|YP_003042736.1| single-stranded dna-binding protein [Photorhabdus asymbiotica]
gi|253782830|emb|CAQ85995.1| single-stranded dna-binding protein [Photorhabdus asymbiotica]
Length = 177
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQDRYTTEVVVNMGGTMQML 113
>gi|392952531|ref|ZP_10318086.1| single-strand binding protein [Hydrocarboniphaga effusa AP103]
gi|391861493|gb|EIT72021.1| single-strand binding protein [Hydrocarboniphaga effusa AP103]
Length = 175
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + +G +VT ++ T ++ + E +WH
Sbjct: 4 GINKVILIGNLGKDPEARSFPNGGSVTNITVATSDSWRDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +LG + ++L GS +Y+EG+L + + D +G R EI
Sbjct: 55 NV-VFHNKLGEIAAQYLRKGSKVYIEGSLRTRKWQDKTSGQDRYTTEI 101
>gi|395778503|ref|ZP_10459015.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|423715185|ref|ZP_17689409.1| single-strand binding protein [Bartonella elizabethae F9251]
gi|395417711|gb|EJF84048.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|395430669|gb|EJF96711.1| single-strand binding protein [Bartonella elizabethae F9251]
Length = 147
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G +P K + SG V F L T ++ + TE WH V
Sbjct: 4 KVMLIGYLGDNPESKTMNSGAEVVNFRLATSESYTDKNTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V+ L + +++L GS +YVEG L+ + + D G+ R EI + +
Sbjct: 56 VFNPHLAKIALQYLHKGSKVYVEGKLQTRKWQDK-NGIDRFTTEIVLSQ 103
>gi|443644296|ref|ZP_21128146.1| Putative prophage PSSB64-02, single-stranded DNA-binding protein
[Pseudomonas syringae pv. syringae B64]
gi|443284313|gb|ELS43318.1| Putative prophage PSSB64-02, single-stranded DNA-binding protein
[Pseudomonas syringae pv. syringae B64]
Length = 164
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPDVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|432673217|ref|ZP_19908725.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
gi|431206635|gb|ELF05014.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
Length = 162
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G TV S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGTVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|50122611|ref|YP_051778.1| single-stranded DNA-binding protein [Pectobacterium atrosepticum
SCRI1043]
gi|49613137|emb|CAG76588.1| single-strand binding protein [Pectobacterium atrosepticum
SCRI1043]
Length = 187
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|429742508|ref|ZP_19276136.1| single-strand binding family protein [Neisseria sp. oral taxon 020
str. F0370]
gi|429168263|gb|EKY10107.1| single-strand binding family protein [Neisseria sp. oral taxon 020
str. F0370]
Length = 169
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G++G+ P + + +G V FS+ T N+R+ + + TE WH ++
Sbjct: 5 KVILIGRLGRDPEVRYMPNGEPVCNFSMATSETWNDRQSGQRQERTE--------WHNIT 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+Y RL + ++L GS IY+EG ++ + + D
Sbjct: 57 MY-RRLAEIAGQYLKKGSQIYIEGRIQSRKYQD 88
>gi|372267942|ref|ZP_09503990.1| single-stranded DNA-binding protein [Alteromonas sp. S89]
Length = 195
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG VT ++ T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGGDPETRYMPSGGAVTNVTVATSETWKDKQSGQQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ RL + ++L GS +Y+EG+L + + D +G R EI
Sbjct: 57 RV-VFFNRLAEIAGEYLRKGSKVYLEGSLRTRKWQDKNSGQDRYTTEI 103
>gi|15837084|ref|NP_297772.1| single-stranded DNA-binding protein [Xylella fastidiosa 9a5c]
gi|9105333|gb|AAF83292.1|AE003898_4 single-stranded DNA binding protein [Xylella fastidiosa 9a5c]
Length = 148
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R NP E +WH
Sbjct: 4 GINKVILVGNLGNEPEIKYTQSGMTITSISLATSSGRKDREG----NPQE-----RTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + +L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAGDYLHKGSQCYIEGTIRYDKFTGND---GQERYVTEI 100
>gi|375109906|ref|ZP_09756145.1| single-strand binding protein [Alishewanella jeotgali KCTC 22429]
gi|393763400|ref|ZP_10352021.1| single-strand binding protein [Alishewanella agri BL06]
gi|397168964|ref|ZP_10492400.1| single-strand binding protein [Alishewanella aestuarii B11]
gi|374570075|gb|EHR41219.1| single-strand binding protein [Alishewanella jeotgali KCTC 22429]
gi|392605740|gb|EIW88630.1| single-strand binding protein [Alishewanella agri BL06]
gi|396089551|gb|EJI87125.1| single-strand binding protein [Alishewanella aestuarii B11]
Length = 194
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + G V S+ T ++ E + TE WH
Sbjct: 4 GINKVILIGNLGQDPEVRYMPQGGAVANLSIATSESWKDKATGEMKEQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV +Y +RL + ++L GS +Y+EG L+ + + D G+ R EI
Sbjct: 56 RVVIY-QRLAEIAGEYLRKGSKVYIEGKLKTRKWQDQ-QGVERYTTEI 101
>gi|374334634|ref|YP_005091321.1| single-strand binding protein [Oceanimonas sp. GK1]
gi|372984321|gb|AEY00571.1| single-strand binding protein [Oceanimonas sp. GK1]
Length = 195
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGHLGQDPEVRYMPNGNAVANITLATSETWRDKQSGEQRERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ +L + ++L GS +YVEG L+ + + D G R E+ + + GT +
Sbjct: 57 RV-VFFGKLAEIAGEYLRKGSQVYVEGRLQTRKWQDQ-GGQDRYTTEVVVDQGGTMQML 113
>gi|28199482|ref|NP_779796.1| single-stranded DNA-binding protein [Xylella fastidiosa Temecula1]
gi|182682214|ref|YP_001830374.1| single-stranded DNA-binding protein [Xylella fastidiosa M23]
gi|386083538|ref|YP_005999820.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558216|ref|ZP_12209204.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
gi|28057597|gb|AAO29445.1| single-stranded DNA binding protein [Xylella fastidiosa Temecula1]
gi|182632324|gb|ACB93100.1| single-strand binding protein [Xylella fastidiosa M23]
gi|307578485|gb|ADN62454.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179291|gb|EGO82249.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
Length = 148
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGND---GQDRYVTEI 100
>gi|422604426|ref|ZP_16676443.1| single-stranded DNA-binding protein [Pseudomonas syringae pv. mori
str. 301020]
gi|330888085|gb|EGH20746.1| single-stranded DNA-binding protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 187
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|300724364|ref|YP_003713682.1| single-strand binding protein [Xenorhabdus nematophila ATCC 19061]
gi|297630899|emb|CBJ91576.1| single-strand binding protein [Xenorhabdus nematophila ATCC 19061]
Length = 170
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + L +G TV SL T +++ E TE WH
Sbjct: 5 GVNKVILLGYLGQDPEIRYLPTGGTVATLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG+ +
Sbjct: 57 RVVIFG-KLAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQML 113
>gi|71729738|gb|EAO31839.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 172
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 28 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 78
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F G R + EI
Sbjct: 79 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRYDKFTGQ-DGQERYVTEI 124
>gi|237797464|ref|ZP_04585925.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020314|gb|EGI00371.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 188
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|90020643|ref|YP_526470.1| single-stranded DNA-binding protein [Saccharophagus degradans 2-40]
gi|89950243|gb|ABD80258.1| single-strand binding protein [Saccharophagus degradans 2-40]
Length = 175
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +GQ P K SG +T S+ T +++ + + TE WH
Sbjct: 5 GVNKVIIVGNLGQDPETKYTASGAAITNVSIATSETWKDKQTGQAQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ RL + ++L GS +Y+EG L + + D
Sbjct: 57 RV-VFFNRLAEIAGEYLRKGSKVYIEGALRTRKWQD 91
>gi|312116029|ref|YP_004013625.1| single-strand binding protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221158|gb|ADP72526.1| single-strand binding protein [Rhodomicrobium vannielii ATCC 17100]
Length = 182
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P + + GR++ L T +++ E TE WH
Sbjct: 5 VNKVILIGNLGADPEVRHTQDGRSICNLRLATTDSWRDKQSGERREKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+ ++ E+LG V ++L G+ +Y+EG L+ + + D
Sbjct: 57 IVIFNEQLGKVAQQYLRKGAKVYIEGQLQTRKWQD 91
>gi|319404133|emb|CBI77724.1| single-strand DNA binding protein [Bartonella rochalimae ATCC
BAA-1498]
gi|319407148|emb|CBI80786.1| single-strand DNA binding protein [Bartonella sp. 1-1C]
Length = 162
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|153008867|ref|YP_001370082.1| ssDNA-binding protein [Ochrobactrum anthropi ATCC 49188]
gi|151560755|gb|ABS14253.1| single-strand binding protein [Ochrobactrum anthropi ATCC 49188]
Length = 151
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGHLGADPDVRRLNSGDMVVNLRIATSESWRDKNSGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+++ E +G V ++L GS +Y+EG L+ + + D
Sbjct: 57 VAIFNENIGKVAEQYLKKGSKVYIEGALQTRKWQD 91
>gi|404319339|ref|ZP_10967272.1| single-strand binding protein [Ochrobactrum anthropi CTS-325]
Length = 151
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ KAILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKAILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E + V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENVAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|424864886|ref|ZP_18288782.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
gi|400759151|gb|EJP73336.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
Length = 145
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQSAVANLSVATTESWKDKESGEMRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV VY +L +V K+L GS++Y+EG L+ + + D G R EI
Sbjct: 56 RV-VYFGKLAEIVEKYLDKGSSVYIEGKLQTRKWQDK-NGADRWTTEI 101
>gi|384228513|ref|YP_005620248.1| single-strand binding protein [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
gi|345539446|gb|AEO08313.1| single-strand binding protein [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
Length = 171
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T ++ E++ TE WH
Sbjct: 5 GINKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGEHKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
R+ ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + GT
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGALQTRKWQDQ-NGIERYTTEIIVNIGGT 109
>gi|289675520|ref|ZP_06496410.1| single-stranded DNA-binding protein, partial [Pseudomonas syringae
pv. syringae FF5]
Length = 146
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|71274903|ref|ZP_00651191.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|170729834|ref|YP_001775267.1| single-stranded DNA-binding protein [Xylella fastidiosa M12]
gi|71164635|gb|EAO14349.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71731377|gb|EAO33440.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
gi|167964627|gb|ACA11637.1| single-stranded DNA binding protein [Xylella fastidiosa M12]
Length = 172
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 28 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSGRKDREGNTQER---------TEWH 78
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F G R + EI
Sbjct: 79 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGQ-DGQERYVTEI 124
>gi|296488185|tpg|DAA30298.1| TPA: single-stranded DNA-binding protein, mitochondrial precursor
[Bos taurus]
Length = 148
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|163869071|ref|YP_001610305.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161018752|emb|CAK02310.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 152
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G +P K + SG V F + T ++ + + TE WH V
Sbjct: 9 KVILIGYLGANPESKTMSSGAEVVNFRMATSESYTDKATNKKVDKTE--------WHSVV 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ +
Sbjct: 61 VFNPHLAKIALQYLKKGSKVYIEGQLQTRKWQDK-NGIERFVTEVIL 106
>gi|340029084|ref|ZP_08665147.1| single-strand binding protein [Paracoccus sp. TRP]
Length = 163
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +GQ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGQDPEIRSFQNGGKVANLRIATSESWKDRNTGERRERTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V +Y E L VV + L G+ +YVEG LE + + D +G R E+A+R
Sbjct: 57 VVIYSEPLIRVVEQFLKKGAKVYVEGQLETRKWQDQ-SGNDRYSTEVALR 105
>gi|317494282|ref|ZP_07952697.1| single-strand binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|365838513|ref|ZP_09379851.1| single-strand binding family protein [Hafnia alvei ATCC 51873]
gi|316917737|gb|EFV39081.1| single-strand binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|364559306|gb|EHM37289.1| single-strand binding family protein [Hafnia alvei ATCC 51873]
Length = 179
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSETWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEIVVNVGGTMQML 113
>gi|316934027|ref|YP_004109009.1| ssDNA-binding protein [Rhodopseudomonas palustris DX-1]
gi|315601741|gb|ADU44276.1| single-strand binding protein [Rhodopseudomonas palustris DX-1]
Length = 167
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSETWRDRATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGQLQTRKWTD 91
>gi|75675758|ref|YP_318179.1| single-stranded DNA-binding protein [Nitrobacter winogradskyi
Nb-255]
gi|74420628|gb|ABA04827.1| single-strand binding protein [Nitrobacter winogradskyi Nb-255]
Length = 163
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSESWRDRTSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L VV ++L GS +YVEG L+ + + D
Sbjct: 57 VVIFNEGLCKVVEQYLKKGSKVYVEGQLQTRKWTD 91
>gi|85372866|ref|YP_456928.1| single-strand binding protein [Erythrobacter litoralis HTCC2594]
gi|84785949|gb|ABC62131.1| single-strand binding protein [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +GQ P + ++G V + T +R E + TE WH V+
Sbjct: 7 KVMLIGNLGQDPEVRSFQNGGKVCNLRIATSETWKDRNSGERQERTE--------WHTVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGTYLIF 198
++ E L V ++L GS +Y+EG L+ + + D +G R E+ +R NGT +
Sbjct: 59 IFSEGLVNVAERYLKKGSKVYIEGQLQTRKWQDQ-SGNDRYSTEVVLRGYNGTLTML 114
>gi|421674098|ref|ZP_16114034.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|410385441|gb|EKP37934.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
Length = 117
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG +P+ K +G + FS+ T ++R + TE WH
Sbjct: 3 GVNKVILVGMVGANPISKHFPNGGSYAQFSIATSEKYQDKRTGDWIENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RI-VANNRLGEIACQFLKKGSKVYIEGSLHTRKWTD 89
>gi|253689874|ref|YP_003019064.1| single-strand binding protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756452|gb|ACT14528.1| single-strand binding protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 176
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLHKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|421668653|ref|ZP_16108687.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|410379142|gb|EKP31747.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
Length = 117
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G +P+ K+ ++G + FS+ T ++R + TE WH
Sbjct: 3 GINKVILVGMLGANPIPKQFQNGGSYAQFSIATSEKYQDKRTGDWIENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RI-VAHNRLGEIACQILKKGSKVYIEGSLHTRKWTD 89
>gi|227326029|ref|ZP_03830053.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
gi|403059946|ref|YP_006648163.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807272|gb|AFR04910.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 181
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|421082521|ref|ZP_15543404.1| Single-stranded DNA-binding protein [Pectobacterium wasabiae CFBP
3304]
gi|401702758|gb|EJS92998.1| Single-stranded DNA-binding protein [Pectobacterium wasabiae CFBP
3304]
Length = 181
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|261822898|ref|YP_003261004.1| single-stranded DNA-binding protein [Pectobacterium wasabiae
WPP163]
gi|261606911|gb|ACX89397.1| single-strand binding protein [Pectobacterium wasabiae WPP163]
gi|385873345|gb|AFI91865.1| Single-stranded DNA-binding protein [Pectobacterium sp. SCC3193]
Length = 180
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|21674759|ref|NP_662824.1| single-strand binding protein [Chlorobium tepidum TLS]
gi|37999707|sp|Q8KB47.1|SSB1_CHLTE RecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1;
AltName: Full=Helix-destabilizing protein 1
gi|21647972|gb|AAM73166.1| single-strand binding protein [Chlorobium tepidum TLS]
Length = 162
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG-GIRNNRRPLENENPTEYANRCAVQW 138
G+ K +L+G +G P +++ SG++V F+L T G +++ L+ +W
Sbjct: 4 GLNKVMLIGHLGNDPERRETASGQSVVNFTLATSEGFKDSSGNLQER----------TEW 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
HR+ + +L + ++L G +Y+EG L+ + ++D TG + EI
Sbjct: 54 HRIVAWG-KLADICSQYLKKGRQVYIEGRLQTRSWDDNKTGDKKYATEIVC 103
>gi|414167647|ref|ZP_11423875.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
gi|410889979|gb|EKS37780.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
Length = 139
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKSTGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ E + V ++L GS +Y+EG+L+ + + D G R E+AI+ G L
Sbjct: 57 VVIFSEPICKVAEQYLRKGSKVYIEGSLQTRKWTDK-DGKDRYSTEVAIQAYGGALTML 114
>gi|301772620|ref|XP_002921721.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 2 [Ailuropoda melanoleuca]
gi|301772622|ref|XP_002921722.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 3 [Ailuropoda melanoleuca]
gi|301772624|ref|XP_002921723.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 4 [Ailuropoda melanoleuca]
Length = 148
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENEAYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|119386513|ref|YP_917568.1| single-strand binding protein [Paracoccus denitrificans PD1222]
gi|119377108|gb|ABL71872.1| single-strand binding protein [Paracoccus denitrificans PD1222]
Length = 170
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +GQ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGQDPEVRSFQNGGKVANLRIATSEQWKDRNTGERRERTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V +Y E L V + L GS +YVEG LE + + D +G R E+A+R
Sbjct: 57 VVIYSEPLVRVAEQFLKKGSKVYVEGQLETRKWQDQ-SGNDRYSTEVALR 105
>gi|262280445|ref|ZP_06058229.1| single-stranded DNA-binding protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258223|gb|EEY76957.1| single-stranded DNA-binding protein [Acinetobacter calcoaceticus
RUH2202]
Length = 197
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|306841829|ref|ZP_07474512.1| single-strand binding protein [Brucella sp. BO2]
gi|306288110|gb|EFM59504.1| single-strand binding protein [Brucella sp. BO2]
Length = 169
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|306843968|ref|ZP_07476563.1| single-strand binding protein [Brucella inopinata BO1]
gi|306275723|gb|EFM57447.1| single-strand binding protein [Brucella inopinata BO1]
Length = 169
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|23501980|ref|NP_698107.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|161619055|ref|YP_001592942.1| single-strand binding protein [Brucella canis ATCC 23365]
gi|163843371|ref|YP_001627775.1| single-strand binding protein [Brucella suis ATCC 23445]
gi|225627576|ref|ZP_03785613.1| single-strand binding protein [Brucella ceti str. Cudo]
gi|225852604|ref|YP_002732837.1| single-strand binding protein [Brucella melitensis ATCC 23457]
gi|256263903|ref|ZP_05466435.1| single-stranded DNA-binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|260566360|ref|ZP_05836830.1| single-stranded DNA-binding protein [Brucella suis bv. 4 str. 40]
gi|261214097|ref|ZP_05928378.1| helix-destabilizing protein [Brucella abortus bv. 3 str. Tulya]
gi|261219450|ref|ZP_05933731.1| single-stranded DNA-binding protein [Brucella ceti M13/05/1]
gi|261222270|ref|ZP_05936551.1| single-stranded DNA-binding protein [Brucella ceti B1/94]
gi|261314173|ref|ZP_05953370.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261317738|ref|ZP_05956935.1| single-stranded DNA-binding protein [Brucella pinnipedialis B2/94]
gi|261321946|ref|ZP_05961143.1| single-stranded DNA-binding protein [Brucella ceti M644/93/1]
gi|261325193|ref|ZP_05964390.1| single-stranded DNA-binding protein [Brucella neotomae 5K33]
gi|261752409|ref|ZP_05996118.1| single-stranded DNA-binding protein [Brucella suis bv. 5 str. 513]
gi|261755069|ref|ZP_05998778.1| single-stranded DNA-binding protein [Brucella suis bv. 3 str. 686]
gi|261758294|ref|ZP_06002003.1| single-stranded DNA-binding protein [Brucella sp. F5/99]
gi|265988769|ref|ZP_06101326.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|265995020|ref|ZP_06107577.1| single-stranded DNA-binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|340790721|ref|YP_004756186.1| single-stranded DNA-binding protein family [Brucella pinnipedialis
B2/94]
gi|376276284|ref|YP_005116723.1| single-strand binding protein [Brucella canis HSK A52141]
gi|376280774|ref|YP_005154780.1| ssDNA-binding protein [Brucella suis VBI22]
gi|384211468|ref|YP_005600550.1| single-strand binding protein [Brucella melitensis M5-90]
gi|384224768|ref|YP_005615932.1| ssDNA-binding protein [Brucella suis 1330]
gi|384408577|ref|YP_005597198.1| single-strand binding protein [Brucella melitensis M28]
gi|384445163|ref|YP_005603882.1| single-strand binding protein [Brucella melitensis NI]
gi|37999436|sp|Q8G0J1.1|SSB_BRUSU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|23347929|gb|AAN30022.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|161335866|gb|ABX62171.1| single-strand binding protein [Brucella canis ATCC 23365]
gi|163674094|gb|ABY38205.1| single-strand binding protein [Brucella suis ATCC 23445]
gi|225617581|gb|EEH14626.1| single-strand binding protein [Brucella ceti str. Cudo]
gi|225640969|gb|ACO00883.1| single-strand binding protein [Brucella melitensis ATCC 23457]
gi|260155878|gb|EEW90958.1| single-stranded DNA-binding protein [Brucella suis bv. 4 str. 40]
gi|260915704|gb|EEX82565.1| helix-destabilizing protein [Brucella abortus bv. 3 str. Tulya]
gi|260920854|gb|EEX87507.1| single-stranded DNA-binding protein [Brucella ceti B1/94]
gi|260924539|gb|EEX91107.1| single-stranded DNA-binding protein [Brucella ceti M13/05/1]
gi|261294636|gb|EEX98132.1| single-stranded DNA-binding protein [Brucella ceti M644/93/1]
gi|261296961|gb|EEY00458.1| single-stranded DNA-binding protein [Brucella pinnipedialis B2/94]
gi|261301173|gb|EEY04670.1| single-stranded DNA-binding protein [Brucella neotomae 5K33]
gi|261303199|gb|EEY06696.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261738278|gb|EEY26274.1| single-stranded DNA-binding protein [Brucella sp. F5/99]
gi|261742162|gb|EEY30088.1| single-stranded DNA-binding protein [Brucella suis bv. 5 str. 513]
gi|261744822|gb|EEY32748.1| single-stranded DNA-binding protein [Brucella suis bv. 3 str. 686]
gi|262766133|gb|EEZ11922.1| single-stranded DNA-binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|263094035|gb|EEZ17969.1| single-stranded DNA-binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|264660966|gb|EEZ31227.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|326409124|gb|ADZ66189.1| single-strand binding protein [Brucella melitensis M28]
gi|326538831|gb|ADZ87046.1| single-strand binding protein [Brucella melitensis M5-90]
gi|340559180|gb|AEK54418.1| single-stranded DNA-binding protein family [Brucella pinnipedialis
B2/94]
gi|343382948|gb|AEM18440.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|349743154|gb|AEQ08697.1| single-strand binding protein [Brucella melitensis NI]
gi|358258373|gb|AEU06108.1| single-stranded DNA-binding protein family [Brucella suis VBI22]
gi|363404851|gb|AEW15146.1| single-strand binding protein [Brucella canis HSK A52141]
Length = 168
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|444308391|ref|ZP_21144037.1| ssDNA-binding protein [Ochrobactrum intermedium M86]
gi|443488223|gb|ELT50979.1| ssDNA-binding protein [Ochrobactrum intermedium M86]
Length = 152
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P +++ SG TV + T +R+ E + TE WH
Sbjct: 5 VNKVILVGYLGADPDVRQMNSGDTVVNMRIATSESWRDRQTGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V ++ E L + ++L GS +Y+EG L+ + + D G R EI +++ L+
Sbjct: 57 VVIFNEGLAKIAEQYLKKGSKVYIEGQLQTRKWQDQ-NGNDRYTTEIVLKQYRGELVML 114
>gi|399070072|ref|ZP_10749641.1| single stranded DNA-binding protein [Caulobacter sp. AP07]
gi|398044626|gb|EJL37434.1| single stranded DNA-binding protein [Caulobacter sp. AP07]
Length = 168
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V L T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRTLSSGDRVANLRLATSETWRDRTSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ + L V +L GST+Y+EG ++ + + D +G+ + EI +++
Sbjct: 57 VVIFNDNLVKVAESYLRKGSTVYIEGAIQTRKWADQ-SGVEKYSTEIVLQK 106
>gi|290476358|ref|YP_003469262.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
gi|289175695|emb|CBJ82498.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
Length = 170
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + L +G TV SL T +++ E TE WH
Sbjct: 5 GVNKVILLGYLGQDPEIRYLPTGGTVATLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG+ +
Sbjct: 57 RVVIFG-KLAEIAEEYLHKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQML 113
>gi|49475757|ref|YP_033798.1| single-strand binding protein (ssb) [Bartonella henselae str.
Houston-1]
gi|49238564|emb|CAF27804.1| Single-strand binding protein (ssb) [Bartonella henselae str.
Houston-1]
Length = 172
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|16125716|ref|NP_420280.1| single-strand binding protein [Caulobacter crescentus CB15]
gi|221234472|ref|YP_002516908.1| single-strand DNA binding protein [Caulobacter crescentus NA1000]
gi|37999459|sp|Q9A894.1|SSB_CAUCR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|13422838|gb|AAK23448.1| single-strand binding protein [Caulobacter crescentus CB15]
gi|220963644|gb|ACL95000.1| single-strand DNA binding protein [Caulobacter crescentus NA1000]
Length = 167
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRSSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ + L V ++L GST+Y+EG L+ + + D TG + EI +++
Sbjct: 57 VVIFNDNLVKVAEQYLRKGSTVYIEGALQTRKWTDN-TGQEKYSTEIVLQK 106
>gi|154248236|ref|YP_001419194.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
gi|154162321|gb|ABS69537.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
Length = 180
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P K ++G V S+ T ++ E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
V ++ E L GV + L GS +Y+EG LE + +
Sbjct: 57 VVIFNENLAGVAERFLKKGSKVYIEGQLETRKY 89
>gi|410091921|ref|ZP_11288467.1| single-stranded DNA-binding protein [Pseudomonas viridiflava
UASWS0038]
gi|409760780|gb|EKN45900.1| single-stranded DNA-binding protein [Pseudomonas viridiflava
UASWS0038]
Length = 184
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|148560153|ref|YP_001259025.1| single-stranded DNA-binding protein family [Brucella ovis ATCC
25840]
gi|148371410|gb|ABQ61389.1| single-stranded DNA-binding protein family [Brucella ovis ATCC
25840]
Length = 168
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|417153627|ref|ZP_11992246.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0497]
gi|417584246|ref|ZP_12235038.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_B2F1]
gi|345330814|gb|EGW63278.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_B2F1]
gi|386169147|gb|EIH35657.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0497]
Length = 177
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLCKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|163867619|ref|YP_001608818.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017265|emb|CAK00823.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 148
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG + FS+ T +++ + TE WH +
Sbjct: 4 KVTLIGRLGANPESKTMTSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V+ L + +++L GS +Y+EG L+ + + D G R EI + +
Sbjct: 56 VFNPHLAKIALQYLSKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQ 103
>gi|38638180|ref|NP_943289.1| single-strand DNA-binding protein [Erwinia amylovora]
gi|37682078|gb|AAQ97964.1| Ssb [Erwinia amylovora]
Length = 174
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANLTLATSESWRDKQTGETREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D TG+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-TGVEKYTTEVVVNVGGTMQML 113
>gi|146276503|ref|YP_001166662.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
gi|145554744|gb|ABP69357.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
Length = 162
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYTTEVVLR 105
>gi|431932249|ref|YP_007245295.1| single stranded DNA-binding protein [Thioflavicoccus mobilis 8321]
gi|431830552|gb|AGA91665.1| single stranded DNA-binding protein [Thioflavicoccus mobilis 8321]
Length = 176
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P + +SG V L T +R E++ TE WHR
Sbjct: 6 VNKVILIGNLGADPEVRYTQSGSAVANVRLATSEQWRDRNTGESQERTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
V V+ +L +V ++L GS IYVEG L+ + + D G R E+ + NGT +
Sbjct: 58 V-VFFGKLAEIVQQYLRKGSKIYVEGKLQTRKWQDQ-NGQDRYNTEVVVDINGTMQML 113
>gi|256369529|ref|YP_003107039.1| single-stranded DNA-binding protein family [Brucella microti CCM
4915]
gi|255999691|gb|ACU48090.1| single-stranded DNA-binding protein family [Brucella microti CCM
4915]
Length = 168
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|432600252|ref|ZP_19836510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE66]
gi|431144950|gb|ELE46632.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE66]
Length = 178
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V L T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQLATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKTTGTMQML 113
>gi|444308449|ref|ZP_21144094.1| single-strand binding protein [Ochrobactrum intermedium M86]
gi|443488032|gb|ELT50789.1| single-strand binding protein [Ochrobactrum intermedium M86]
Length = 171
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|350571215|ref|ZP_08939549.1| single-strand binding protein [Neisseria wadsworthii 9715]
gi|349792825|gb|EGZ46672.1| single-strand binding protein [Neisseria wadsworthii 9715]
Length = 169
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G++G+ P + + +G V FS+ T N+R+ + TE WH ++
Sbjct: 5 KVILIGRLGRDPEVRYMPNGEAVANFSVATSETWNDRQTGQRVERTE--------WHNIT 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+Y RL + ++L GS +Y+EG ++ + + D TG+ R +I
Sbjct: 57 MY-RRLAEIAGQYLKKGSQVYIEGRIQSRKYTDK-TGVERTAYDI 99
>gi|71275344|ref|ZP_00651630.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71163644|gb|EAO13360.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71729210|gb|EAO31330.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F G R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGQ-DGQERYVTEI 100
>gi|409427735|ref|ZP_11262228.1| protein Ssb [Pseudomonas sp. HYS]
Length = 170
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|404319224|ref|ZP_10967157.1| single-strand binding protein [Ochrobactrum anthropi CTS-325]
Length = 172
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVAHLRIATSESWRDRQSGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|374575667|ref|ZP_09648763.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM471]
gi|386395139|ref|ZP_10079917.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM1253]
gi|374423988|gb|EHR03521.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM471]
gi|385735765|gb|EIG55961.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM1253]
Length = 165
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSVATSETWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ IYVEG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKIYVEGALQTRKWTD 91
>gi|262042193|ref|ZP_06015366.1| single-strand binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040515|gb|EEW41613.1| single-strand binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 220
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 45 GVNKVILVGYLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 96
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NGT +
Sbjct: 97 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTMQML 153
>gi|389797800|ref|ZP_10200839.1| single stranded DNA-binding protein [Rhodanobacter sp. 116-2]
gi|388446638|gb|EIM02662.1| single stranded DNA-binding protein [Rhodanobacter sp. 116-2]
Length = 169
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + SG TV FSL T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGSDPEVRSTGSGTTVCSFSLATSESWTDKQSGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
R+ ++ RLG + ++L G +Y+EG++ F
Sbjct: 56 RIKIFG-RLGEIAGEYLKKGRQVYIEGSIRTDKF 88
>gi|85060106|ref|YP_455808.1| single-stranded DNA-binding protein [Sodalis glossinidius str.
'morsitans']
gi|84780626|dbj|BAE75403.1| single-strand binding protein [Sodalis glossinidius str.
'morsitans']
Length = 175
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNVGGTMQML 113
>gi|71891820|ref|YP_277549.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71795926|gb|AAZ40677.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 163
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT S+ T +++ E + TE WH
Sbjct: 10 GINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTE--------WH 61
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L + ++L GS +Y+EG+L+ + + + G R I EI + G
Sbjct: 62 RVVLFG-KLAEIASEYLHKGSQVYIEGSLKTRKWQNQ-NGQDRYITEIIVNIGGA 114
>gi|42523087|ref|NP_968467.1| single-strand binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403566|ref|YP_007022537.1| single-strand binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
gi|39575292|emb|CAE79460.1| single-strand binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860234|gb|AFY01270.1| single-strand binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 143
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG--GIRNNRRPLENENPTEYANRCAVQ 137
G+ K ILVG++G P K + SG TV +L T +++ +R E
Sbjct: 3 GVNKVILVGRLGADPEVKAIGSGSTVARLNLATSESWVKDGQRQERTE------------ 50
Query: 138 WHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR++V+ +L + KHL G +YVEG L+ + + D
Sbjct: 51 WHRITVWG-KLAEICGKHLSKGRQVYVEGKLQTRQWED 87
>gi|386827718|ref|ZP_10114825.1| single stranded DNA-binding protein [Beggiatoa alba B18LD]
gi|386428602|gb|EIJ42430.1| single stranded DNA-binding protein [Beggiatoa alba B18LD]
Length = 178
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG++G P + SG + SL T +++ + + TE WHR
Sbjct: 4 VNKVILVGRLGNDPEVRYSASGSAMANISLATSEQWKDKQSGQKQEKTE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ ERL +V ++L GS IYVEG L+ + + D G R EI R
Sbjct: 56 V-VFFERLAEIVGEYLRKGSLIYVEGKLQTRKWQD-NNGQERYTTEIVAR 103
>gi|293372580|ref|ZP_06618962.1| single-strand binding family protein [Bacteroides ovatus SD CMC 3f]
gi|292632389|gb|EFF50985.1| single-strand binding family protein [Bacteroides ovatus SD CMC 3f]
Length = 183
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K +G V F L T R +N T+ R +WH +
Sbjct: 29 KVILLGNVGQDPQVKYFDTGSAVATFRLAT-----TDRAYTLQNGTQVPERT--EWHNI- 80
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 81 VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 126
>gi|167646841|ref|YP_001684504.1| ssDNA-binding protein [Caulobacter sp. K31]
gi|167349271|gb|ABZ72006.1| single-strand binding protein [Caulobacter sp. K31]
Length = 165
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V L T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRTLSSGDRVANLRLATSESWRDRTSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ + L V +L GST+Y+EG ++ + + D +G+ + EI +++
Sbjct: 57 VVIFNDNLVKVAESYLRKGSTVYIEGAIQTRKWADA-SGVEKYSTEIVLQK 106
>gi|90576561|ref|YP_534803.1| putative single strand binding protein Ssb [Pseudomonas putida]
gi|90567914|dbj|BAE92137.1| putative single strand binding protein Ssb [Pseudomonas putida]
Length = 149
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEKWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|27379809|ref|NP_771338.1| single-stranded DNA-binding protein [Bradyrhizobium japonicum USDA
110]
gi|37999424|sp|Q89L50.1|SSB_BRAJA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|27352962|dbj|BAC49963.1| single-strand DNA binding protein [Bradyrhizobium japonicum USDA
110]
Length = 164
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|400406509|ref|YP_006589257.1| single stranded DNA-binding protein [secondary endosymbiont of
Heteropsylla cubana]
gi|400364762|gb|AFP85829.1| single stranded DNA-binding protein [secondary endosymbiont of
Heteropsylla cubana]
Length = 175
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + + +G V +L T +++ E+ TE WH
Sbjct: 5 GVNKVILIGNLGHDPEIRYMPNGGAVANITLATSETWRDKQTGESREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
R+ V+ +L + ++L GS +Y+EG+L+ + + D +G R E+ + NGT +
Sbjct: 57 RI-VFFGKLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNMNGTMHML 113
>gi|398820051|ref|ZP_10578591.1| single stranded DNA-binding protein [Bradyrhizobium sp. YR681]
gi|398229309|gb|EJN15391.1| single stranded DNA-binding protein [Bradyrhizobium sp. YR681]
Length = 165
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|383771705|ref|YP_005450770.1| single-strand DNA binding protein RecBCD nuclease [Bradyrhizobium
sp. S23321]
gi|381359828|dbj|BAL76658.1| single-strand DNA binding protein RecBCD nuclease [Bradyrhizobium
sp. S23321]
Length = 165
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|254797103|ref|YP_003081941.1| single-strand binding protein [Neorickettsia risticii str.
Illinois]
gi|254590342|gb|ACT69704.1| single-strand binding protein [Neorickettsia risticii str.
Illinois]
Length = 151
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCA-VQWH 139
I K IL+G +G+ P + + + + V FSL T EN N R + +WH
Sbjct: 2 INKVILIGNLGKDPEIRTMANAKQVATFSLAT---------TENWNDKNTGERVSKTEWH 52
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+V V+ E L V+ ++ G+ +Y+EG+L+ + + D G+ R E+ +
Sbjct: 53 QVVVFNEPLIKVISNYVNKGTRLYIEGSLQTRKWTDN-NGIERYTTEVVL 101
>gi|94676852|ref|YP_588579.1| single-strand binding protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94220002|gb|ABF14161.1| single-strand binding protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 165
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEIRYMPNGCAVANINLATSESWRDKQTGDTKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D G R EI + NG+ +
Sbjct: 57 RVVLFG-KLAEVTGEYLRKGSQVYIEGSLQTRKWQDQ-NGQDRYTTEIIVNANGSMQML 113
>gi|429331908|ref|ZP_19212648.1| single-strand binding protein [Pseudomonas putida CSV86]
gi|428763419|gb|EKX85594.1| single-strand binding protein [Pseudomonas putida CSV86]
Length = 171
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|422784350|ref|ZP_16837131.1| single-strand binding protein [Escherichia coli TW10509]
gi|423007565|ref|ZP_16998306.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 04-8351]
gi|323974535|gb|EGB69660.1| single-strand binding protein [Escherichia coli TW10509]
gi|354856180|gb|EHF16645.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 04-8351]
Length = 175
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112
>gi|71727757|gb|EAO30024.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
gi|71728151|gb|EAO30345.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGND---GQDRYVTEI 100
>gi|365894363|ref|ZP_09432511.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3843]
gi|365424901|emb|CCE05053.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3843]
Length = 163
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|354596222|ref|ZP_09014239.1| single-strand binding protein [Brenneria sp. EniD312]
gi|353674157|gb|EHD20190.1| single-strand binding protein [Brenneria sp. EniD312]
Length = 181
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G+ + E+ + GT +
Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVYIEGSLQTRKWTDQ-SGVDKYTTEVVVNIGGTMQML 113
>gi|133756485|ref|YP_001096441.1| single-strand binding protein [Escherichia coli]
gi|237702566|ref|ZP_04533047.1| single strand DNA binding protein [Escherichia sp. 3_2_53FAA]
gi|298378810|ref|ZP_06988692.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|312964349|ref|ZP_07778643.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|410593381|ref|YP_006953504.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609750|ref|YP_006953930.1| single-stranded DNA-binding protein [Escherichia coli]
gi|419184106|ref|ZP_13727658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189576|ref|ZP_13733070.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|420133538|ref|ZP_14641759.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|422789326|ref|ZP_16842056.1| single-strand binding protein [Escherichia coli H489]
gi|423705354|ref|ZP_17679773.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|425189699|ref|ZP_18586935.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|429339530|ref|YP_006990741.1| single-stranded DNA-binding protein [Escherichia coli]
gi|432455052|ref|ZP_19697259.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE201]
gi|432492986|ref|ZP_19734817.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE214]
gi|432541544|ref|ZP_19778407.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE236]
gi|432547589|ref|ZP_19784378.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE237]
gi|432978801|ref|ZP_20167617.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE209]
gi|432993047|ref|ZP_20181678.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE218]
gi|433061128|ref|ZP_20248112.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE124]
gi|433090275|ref|ZP_20276602.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE137]
gi|433118374|ref|ZP_20304135.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE153]
gi|444928181|ref|ZP_21247398.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|451770718|ref|YP_007447530.1| single-stranded DNA-binding protein [Escherichia coli]
gi|89033310|gb|ABD59988.1| single-strand binding protein [Escherichia coli]
gi|226903347|gb|EEH89606.1| single strand DNA binding protein [Escherichia sp. 3_2_53FAA]
gi|298280419|gb|EFI21922.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|312290826|gb|EFR18702.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|323958995|gb|EGB54666.1| single-strand binding protein [Escherichia coli H489]
gi|359359327|gb|AEV41191.1| single-stranded DNA-binding protein [Escherichia coli]
gi|378019474|gb|EHV82304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378021978|gb|EHV84669.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|385704131|gb|EIG41213.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|386118422|gb|AFI99210.1| single-stranded DNA-binding protein [Escherichia coli]
gi|394425238|gb|EJE98236.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|408099988|gb|EKH32565.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|410832562|gb|AFV92799.1| single-stranded DNA-binding protein [Escherichia coli]
gi|430985769|gb|ELD02353.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE201]
gi|431031141|gb|ELD44041.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE214]
gi|431078562|gb|ELD85612.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE236]
gi|431084327|gb|ELD90491.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE237]
gi|431478555|gb|ELH58301.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE209]
gi|431514838|gb|ELH92678.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE218]
gi|431562205|gb|ELI35526.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE124]
gi|431596701|gb|ELI66648.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE137]
gi|431627649|gb|ELI96043.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE153]
gi|444534878|gb|ELV15061.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|449535700|gb|AGE98070.1| single-stranded DNA-binding protein [Escherichia coli]
Length = 175
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|388259073|ref|ZP_10136247.1| single-strand binding protein [Cellvibrio sp. BR]
gi|387937031|gb|EIK43588.1| single-strand binding protein [Cellvibrio sp. BR]
Length = 196
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P K + SG VT S+ T ++ + + TE WH
Sbjct: 4 GINKVILIGNIGQDPEVKYMPSGGAVTNVSVATSETWKDKNTGQPQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV V+ RLG + ++L GS +Y+EG L + +
Sbjct: 56 RV-VFFNRLGEIAGEYLKKGSKVYIEGALRTRKW 88
>gi|163868148|ref|YP_001609352.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017799|emb|CAK01357.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 153
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P K + SG + F + T ++ + + TE WH V
Sbjct: 9 KVILIGYLGADPESKTMNSGAEIVNFRMATSESYTDKNTHQKVDKTE--------WHSVV 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V+ L + +++L GS +Y+EG L+ + + D G R EI + +
Sbjct: 61 VFNPHLAKIALQYLHKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQ 108
>gi|301048746|ref|ZP_07195753.1| single-strand binding family protein, partial [Escherichia coli MS
185-1]
gi|300299424|gb|EFJ55809.1| single-strand binding family protein [Escherichia coli MS 185-1]
Length = 199
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 29 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 80
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 81 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 136
>gi|240850481|ref|YP_002971880.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267604|gb|ACS51192.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 151
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG + FS+ T +++ + TE WH V
Sbjct: 4 KVTLIGRLGANPESKTMNSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
++ L + +++L GS +YVEG L+ + + D G R EI +
Sbjct: 56 IFNPHLAKIALQYLNKGSKVYVEGKLQTRKWQDK-NGHERYTTEIVL 101
>gi|395766576|ref|ZP_10447115.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
gi|395415700|gb|EJF82127.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
Length = 148
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K + SG + FS+ T +++ + TE WH V
Sbjct: 4 KVMLIGRLGADPESKTMNSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
++ L + +++L GS +YVEG L+ + + D
Sbjct: 56 IFNPHLAKIALQYLNKGSKVYVEGKLQTRKWQD 88
>gi|300714922|ref|YP_003739725.1| ssDNA-binding protein [Erwinia billingiae Eb661]
gi|299060758|emb|CAX57865.1| Single-stranded DNA-binding protein [Erwinia billingiae Eb661]
Length = 182
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAAEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|265984164|ref|ZP_06096899.1| single-stranded DNA-binding protein [Brucella sp. 83/13]
gi|306838161|ref|ZP_07471017.1| single-strand binding protein [Brucella sp. NF 2653]
gi|264662756|gb|EEZ33017.1| single-stranded DNA-binding protein [Brucella sp. 83/13]
gi|306406751|gb|EFM62974.1| single-strand binding protein [Brucella sp. NF 2653]
Length = 169
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKIAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|37912973|gb|AAR05305.1| predicted single-stranded DNA-binding protein [uncultured marine
gamma proteobacterium EB000-45B06]
gi|40063204|gb|AAR38041.1| single-strand binding protein [uncultured marine bacterium 562]
Length = 146
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQSAVANISIATTESWKDKESGEMRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+V VY +L +V K+L GS++Y+EG L+ + + D +G R EI
Sbjct: 56 KV-VYFGKLAEIVEKYLDKGSSVYIEGKLQTRKWQDK-SGADRWTTEI 101
>gi|145300853|ref|YP_001143694.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418361408|ref|ZP_12962063.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142853625|gb|ABO91946.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356687438|gb|EHI52020.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 196
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ +L V ++L GS +YVEG L+ + + D
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQD 91
>gi|301772618|ref|XP_002921720.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 1 [Ailuropoda melanoleuca]
Length = 138
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENEAYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|295698774|ref|YP_003603429.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|295698775|ref|YP_003603430.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|291157043|gb|ADD79488.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|291157389|gb|ADD79834.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
Length = 161
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVILIGYLGQDPEIRYMPNGNAVANLSLATSENWKDKQTGEMRERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V +HL GS +Y+EG+L+ + + D G R E+ + GT +
Sbjct: 57 RVVIFG-KLAEVSGEHLRKGSQVYIEGSLQTRKWQDQ-NGQDRYNTEVIVNIGGTMRML 113
>gi|422784247|ref|ZP_16837029.1| single-strand binding protein [Escherichia coli TW10509]
gi|323974708|gb|EGB69823.1| single-strand binding protein [Escherichia coli TW10509]
Length = 173
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|194430472|ref|ZP_03062950.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B171]
gi|194411483|gb|EDX27827.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B171]
Length = 175
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112
>gi|317046541|ref|YP_004114189.1| ssDNA-binding protein [Pantoea sp. At-9b]
gi|316948158|gb|ADU67633.1| single-strand binding protein [Pantoea sp. At-9b]
Length = 182
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G R EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEIVVNVGGTMQML 113
>gi|220935461|ref|YP_002514360.1| single-strand binding protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219996771|gb|ACL73373.1| single-strand binding protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 155
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P K + SG V SL T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGNDPEVKYMPSGNAVANVSLATTESWKDKNSGERQEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV+ Y +L + ++L GS IYVEG L+ + +
Sbjct: 56 RVTFYG-KLAEIAGEYLKKGSQIYVEGRLQTRKW 88
>gi|422646639|ref|ZP_16709772.1| single-stranded DNA-binding protein, partial [Pseudomonas syringae
pv. maculicola str. ES4326]
gi|330960186|gb|EGH60446.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 107
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGT 107
>gi|407893144|ref|ZP_11152174.1| single-strand DNA binding protein [Diplorickettsia massiliensis
20B]
Length = 141
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + +G V ++ TG +++ E + TE WH
Sbjct: 4 GINKVILIGHLGADPEVCSMPNGTAVATINVATGETWKDKQTGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ +RL +V L GS +Y+EG L+ + + D
Sbjct: 56 RV-VFFQRLAEIVRDFLKKGSQVYIEGRLQTRKWQD 90
>gi|440509613|ref|YP_007347049.1| single-stranded DNA-binding protein [Candidatus Blochmannia
chromaiodes str. 640]
gi|440453826|gb|AGC03318.1| single-stranded DNA-binding protein [Candidatus Blochmannia
chromaiodes str. 640]
Length = 158
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT S+ T +++ E + TE WH
Sbjct: 5 GINKVILIGYLGQEPEVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L + ++L GS +Y+EG+L+ + + + G R I EI + G
Sbjct: 57 RVVLFG-KLAEIASEYLHKGSQVYIEGSLKTRKWQNQ-NGQDRYITEIIVSIGGA 109
>gi|315364701|pdb|3PGZ|A Chain A, Crystal Structure Of A Single Strand Binding Protein (Ssb)
From Bartonella Henselae
gi|315364702|pdb|3PGZ|B Chain B, Crystal Structure Of A Single Strand Binding Protein (Ssb)
From Bartonella Henselae
Length = 193
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 28 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 79
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 80 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 127
>gi|238921392|ref|YP_002934907.1| single-stranded DNA-binding protein, putative [Edwardsiella
ictaluri 93-146]
gi|238870961|gb|ACR70672.1| single-stranded DNA-binding protein, putative [Edwardsiella
ictaluri 93-146]
Length = 182
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV++Y +L + ++L GS +Y+EG L + + D +G R E+ + +G+ +
Sbjct: 57 RVALY-GKLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-SGQDRYTTEVVVDISGSMQML 113
>gi|28198915|ref|NP_779229.1| single-stranded DNA-binding protein [Xylella fastidiosa Temecula1]
gi|182681623|ref|YP_001829783.1| single-stranded DNA-binding protein [Xylella fastidiosa M23]
gi|386085111|ref|YP_006001393.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417557931|ref|ZP_12208934.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
gi|28057013|gb|AAO28878.1| single-stranded DNA binding protein [Xylella fastidiosa Temecula1]
gi|182631733|gb|ACB92509.1| single-strand binding protein [Xylella fastidiosa M23]
gi|307580058|gb|ADN64027.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179463|gb|EGO82406.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
Length = 148
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRYDKFTGND---GQDRYVTEI 100
>gi|299133977|ref|ZP_07027171.1| single-strand binding protein [Afipia sp. 1NLS2]
gi|298591813|gb|EFI52014.1| single-strand binding protein [Afipia sp. 1NLS2]
Length = 160
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPDIRRTQDGRPIANLSIATSETWRDKNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|294010285|ref|YP_003543745.1| single-stranded DNA-binding protein [Sphingobium japonicum UT26S]
gi|390168389|ref|ZP_10220351.1| single-stranded DNA-binding protein [Sphingobium indicum B90A]
gi|292673615|dbj|BAI95133.1| single-stranded DNA-binding protein [Sphingobium japonicum UT26S]
gi|389589057|gb|EIM67090.1| single-stranded DNA-binding protein [Sphingobium indicum B90A]
Length = 185
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGADPEVKSFQNGGKVCNLRIATSESWKDRMSGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ E L GV + L GS +Y+EG L + + D +G R E+ ++ G L
Sbjct: 57 VAIFSEGLAGVAERFLRKGSKVYLEGQLRTRKWQDQ-SGNDRYTTEVVLQGPGAVLTML 114
>gi|15837993|ref|NP_298681.1| single-stranded DNA-binding protein [Xylella fastidiosa 9a5c]
gi|71274822|ref|ZP_00651110.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|170729933|ref|YP_001775366.1| single-stranded DNA-binding protein [Xylella fastidiosa M12]
gi|37999801|sp|Q9PDI7.1|SSB2_XYLFA RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
AltName: Full=Helix-destabilizing protein 2
gi|9106400|gb|AAF84201.1|AE003970_8 single-stranded DNA binding protein [Xylella fastidiosa 9a5c]
gi|71164554|gb|EAO14268.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71727795|gb|EAO30051.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
gi|167964726|gb|ACA11736.1| single-stranded DNA binding protein [Xylella fastidiosa M12]
Length = 164
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G T+T SL T +R ++ E +WH
Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV + +LG + ++L GS Y+EG++ F
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYIEGSIRYDKF 87
>gi|71732476|gb|EAO34529.1| Single-strand binding protein [Xylella fastidiosa subsp. sandyi
Ann-1]
Length = 164
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G T+T SL T +R ++ E +WH
Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV + +LG + ++L GS Y+EG++ F
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYIEGSIRYDKF 87
>gi|384218709|ref|YP_005609875.1| single-strand DNA-binding protein [Bradyrhizobium japonicum USDA 6]
gi|354957608|dbj|BAL10287.1| single-strand DNA-binding protein [Bradyrhizobium japonicum USDA 6]
Length = 165
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|416872470|ref|ZP_11916708.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 152504]
gi|334845999|gb|EGM24557.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 152504]
Length = 165
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + G+ VT SL T +++ + + TE WH
Sbjct: 4 GVNKVILVGHLGQDPDARSTPGGKAVTSLSLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV ++ RL + ++L GS +Y+EG+L + +
Sbjct: 56 RVVLFG-RLAEIAAQYLRKGSQVYIEGSLRTRKWQ 89
>gi|418869436|ref|ZP_13423871.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|392836315|gb|EJA91900.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 167
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ +L + ++L G+ +Y+EG L + ++D G+ R + EI ++ GT +
Sbjct: 57 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRSWDD--NGITRYVTEILVKTTGTMQML 112
>gi|298155818|ref|YP_003717644.1| putative single-stranded DNA binding protein [Escherichia coli ETEC
1392/75]
gi|297374415|emb|CBL93476.1| putative single-stranded DNA binding protein [Escherichia coli ETEC
1392/75]
Length = 185
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 17 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 68
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 69 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 124
>gi|254780183|ref|YP_003064596.1| single-strand binding protein (ssb) [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039860|gb|ACT56656.1| single-strand binding protein (ssb) [Candidatus Liberibacter
asiaticus str. psy62]
Length = 159
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P + + GR + + T +R E TE WH V
Sbjct: 7 KVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTE--------WHSVI 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ E L +V ++L GS +Y+EG+L+ + + D +G R EI +R
Sbjct: 59 VFSEELCRIVEQYLRKGSKVYIEGSLQTRKWQDQ-SGNNRYTTEIIMR 105
>gi|448244161|ref|YP_007408214.1| single-stranded DNA-binding protein [Serratia marcescens WW4]
gi|134916|sp|P25762.2|SSB_SERMA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|47270|emb|CAA46208.1| single-stranded DNA-binding protein [Serratia marcescens]
gi|445214525|gb|AGE20195.1| single-stranded DNA-binding protein [Serratia marcescens WW4]
gi|453063450|gb|EMF04429.1| single-stranded DNA-binding protein [Serratia marcescens VGH107]
Length = 176
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVVNVGGTMQML 113
>gi|110679808|ref|YP_682815.1| single-strand binding protein [Roseobacter denitrificans OCh 114]
gi|109455924|gb|ABG32129.1| single-strand binding protein [Roseobacter denitrificans OCh 114]
Length = 166
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARVAEQYLRKGSKVYLEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|440901653|gb|ELR52553.1| Single-stranded DNA-binding protein, mitochondrial, partial [Bos
grunniens mutus]
Length = 140
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 18 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENETYQMGDVSQKT 74
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 75 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDK 114
>gi|445453572|ref|ZP_21445173.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
gi|444753366|gb|ELW78020.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
Length = 200
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
ILVG +G+ P K +G ++T FS+ T + ++ E + TE WHR+ ++
Sbjct: 15 ILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WHRIVLH 66
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 67 -NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 107
>gi|443468490|ref|ZP_21058702.1| Single-stranded DNA-binding protein [Pseudomonas pseudoalcaligenes
KF707]
gi|442897652|gb|ELS24531.1| Single-stranded DNA-binding protein [Pseudomonas pseudoalcaligenes
KF707]
Length = 161
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + L +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYLPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RV V+ RL + ++L GS +YVEG+L + + G+ R EI + NG
Sbjct: 56 RV-VFFGRLAEIAGEYLRKGSQVYVEGSLRTREWEK--DGVKRYTTEIVVDING 106
>gi|348590764|ref|YP_004875226.1| single-stranded DNA-binding protein [Taylorella asinigenitalis
MCE3]
gi|347974668|gb|AEP37203.1| Single-stranded DNA-binding protein [Taylorella asinigenitalis
MCE3]
Length = 167
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G++G P + + R VT SLGT + N+R E TE WHR
Sbjct: 3 VNKVILIGRLGNDPDVRTGQDNRVVTRISLGTNLVWNDRNTGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ R V +L G+ +YVEG L+ + D
Sbjct: 55 V-VFFGRTAEVARDYLKKGAQVYVEGRLKTNKYQD 88
>gi|291613269|ref|YP_003523426.1| single-strand binding protein [Sideroxydans lithotrophicus ES-1]
gi|291583381|gb|ADE11039.1| single-strand binding protein [Sideroxydans lithotrophicus ES-1]
Length = 153
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG++G+ P + + +G VT +L T EN + +WH
Sbjct: 3 VNKVILVGRLGKDPETRYMTNGEAVTNVTLATS---------ENWKDKSGEKQEKTEWHN 53
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ V+ RL V ++L GS IYVEG ++ + + D TG R EI +
Sbjct: 54 L-VFYRRLAEVAGEYLKKGSQIYVEGKIQTRKWQDKETGKDRYTTEIIV 101
>gi|119478100|ref|ZP_01618179.1| single-strand binding protein [marine gamma proteobacterium
HTCC2143]
gi|119448806|gb|EAW30049.1| single-strand binding protein [marine gamma proteobacterium
HTCC2143]
Length = 194
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P QK + +G VT +L T +++ + + TE WH
Sbjct: 4 GINKVILIGNLGNDPEQKSMPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V+ RL + ++L GS +Y+EG+L + + D
Sbjct: 56 RI-VFFNRLAEIAGQYLNKGSKVYLEGSLRTRKWQD 90
>gi|134910|sp|P28045.2|SSBR_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 175
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112
>gi|191173636|ref|ZP_03035161.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli F11]
gi|281427966|ref|YP_003352477.1| single-stranded DNA binding protein [Escherichia coli SE15]
gi|293404623|ref|ZP_06648616.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|386602563|ref|YP_006104071.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|422757393|ref|ZP_16811212.1| single-strand binding protein [Escherichia coli H263]
gi|422842042|ref|ZP_16890009.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|432351095|ref|ZP_19594413.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE2]
gi|432391323|ref|ZP_19634176.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE21]
gi|432424699|ref|ZP_19667223.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE181]
gi|432462094|ref|ZP_19704234.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE204]
gi|432464107|ref|ZP_19706221.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE205]
gi|432497974|ref|ZP_19739760.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|432517117|ref|ZP_19754316.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE228]
gi|432536460|ref|ZP_19773389.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE235]
gi|432572158|ref|ZP_19808651.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE55]
gi|432581514|ref|ZP_19817929.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE57]
gi|432585680|ref|ZP_19822059.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|432629661|ref|ZP_19865619.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE80]
gi|432639235|ref|ZP_19875086.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE83]
gi|432663494|ref|ZP_19899104.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE116]
gi|432692966|ref|ZP_19928184.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE162]
gi|432706775|ref|ZP_19941857.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE6]
gi|432712891|ref|ZP_19947935.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE8]
gi|432730291|ref|ZP_19965157.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE45]
gi|432734795|ref|ZP_19969611.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE42]
gi|432757954|ref|ZP_19992480.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE46]
gi|432818444|ref|ZP_20052166.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|432818450|ref|ZP_20052172.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|433002517|ref|ZP_20191027.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE227]
gi|433056068|ref|ZP_20243195.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE122]
gi|433070984|ref|ZP_20257710.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE128]
gi|433076077|ref|ZP_20262670.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE129]
gi|433109014|ref|ZP_20294912.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|433156776|ref|ZP_20341675.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE176]
gi|433160706|ref|ZP_20345525.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE177]
gi|433181389|ref|ZP_20365721.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE82]
gi|433201186|ref|ZP_20385041.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|433332273|ref|ZP_20404529.1| single-stranded DNA-binding protein [Escherichia coli J96]
gi|190906116|gb|EDV65730.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli F11]
gi|281181698|dbj|BAI58027.1| single-stranded DNA binding protein [Escherichia coli SE15]
gi|291428335|gb|EFF01361.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|307629832|gb|ADN74135.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|323954204|gb|EGB49993.1| single-strand binding protein [Escherichia coli H263]
gi|371602591|gb|EHN91282.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|430882225|gb|ELC05426.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE2]
gi|430921052|gb|ELC41909.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE21]
gi|430959509|gb|ELC77827.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE181]
gi|430987500|gb|ELD04037.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE204]
gi|430998070|gb|ELD14318.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE205]
gi|431034368|gb|ELD46307.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|431053178|gb|ELD62812.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE228]
gi|431073701|gb|ELD81342.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE235]
gi|431111608|gb|ELE15505.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE55]
gi|431122835|gb|ELE25591.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE57]
gi|431125590|gb|ELE27991.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|431175436|gb|ELE75445.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE80]
gi|431185887|gb|ELE85572.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE83]
gi|431206335|gb|ELF04748.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE116]
gi|431237718|gb|ELF32708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE162]
gi|431257059|gb|ELF49984.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE6]
gi|431258230|gb|ELF51012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE8]
gi|431279795|gb|ELF70743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE45]
gi|431290838|gb|ELF81368.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE42]
gi|431312580|gb|ELG00578.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE46]
gi|431373485|gb|ELG59089.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431373491|gb|ELG59095.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431522543|gb|ELH99777.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE227]
gi|431562761|gb|ELI36006.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE122]
gi|431576235|gb|ELI48930.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE128]
gi|431577737|gb|ELI50366.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE129]
gi|431618085|gb|ELI87066.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|431667219|gb|ELJ33810.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE176]
gi|431673981|gb|ELJ40167.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE177]
gi|431694983|gb|ELJ60322.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE82]
gi|431714122|gb|ELJ78322.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|432343935|gb|ELL38743.1| single-stranded DNA-binding protein [Escherichia coli J96]
Length = 175
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|332531571|ref|ZP_08407468.1| single-strand-binding protein [Hylemonella gracilis ATCC 19624]
gi|332038934|gb|EGI75363.1| single-strand-binding protein [Hylemonella gracilis ATCC 19624]
Length = 184
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG G+ P + L SG V S+ T R +R E T QWHR
Sbjct: 4 VNKVILVGNCGRDPEIRYLPSGGAVANISIATTSRRKDRNSGEMVEET--------QWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+ + ERL +V +++ G+ IYVEG L + + D
Sbjct: 56 VTFF-ERLAEIVGEYVKKGTPIYVEGRLTYRKYTD 89
>gi|41056962|ref|NP_957582.1| single-stranded DNA-binding protein [Escherichia coli]
gi|219586069|ref|YP_002456163.1| single-stranded DNA-binding protein [Escherichia coli]
gi|256367678|ref|YP_003108247.1| single-strand binding protein [Escherichia coli]
gi|410610048|ref|YP_006954254.1| Ssb [Escherichia coli]
gi|410683162|ref|YP_006940232.1| single-stranded DNA binding protein ssb [Escherichia coli F18+]
gi|452909621|ref|NP_052922.3| single strand DNA binding protein [Shigella flexneri 2b]
gi|5103190|dbj|BAA78826.1| single strand DNA binding protein [Shigella flexneri 2b]
gi|38606099|gb|AAR25063.1| ssb [Escherichia coli]
gi|218931652|gb|ACL12425.1| single-strand binding protein [Escherichia coli]
gi|228480615|gb|ACQ41943.1| single-strand binding protein [Escherichia coli]
gi|356598389|gb|AET14904.1| single-stranded DNA binding protein ssb [Escherichia coli F18+]
gi|391324382|gb|AFM38928.1| Ssb [Escherichia coli]
Length = 188
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|269140524|ref|YP_003297225.1| single-strand DNA-binding protein [Edwardsiella tarda EIB202]
gi|387868996|ref|YP_005700465.1| ssDNA-binding protein [Edwardsiella tarda FL6-60]
gi|267986185|gb|ACY86014.1| single-strand DNA-binding protein [Edwardsiella tarda EIB202]
gi|304560309|gb|ADM42973.1| Single-stranded DNA-binding protein [Edwardsiella tarda FL6-60]
Length = 186
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV++Y +L + ++L GS +Y+EG L + + D +G R E+ + +G+ +
Sbjct: 57 RVALY-GKLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-SGQDRYTTEVVVDISGSMQML 113
>gi|383647813|ref|ZP_09958219.1| single-strand binding protein [Sphingomonas elodea ATCC 31461]
Length = 193
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGRDPESRAFQNGGKVVELRIATSESWKDRNSGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L GS +Y+EG L+ + + D +G R EI ++
Sbjct: 57 VKIFSEGLANVAERYLRKGSKVYLEGQLQTRKWQDQ-SGADRYSTEIVLQ 105
>gi|114707073|ref|ZP_01439972.1| single-strand DNA binding protein [Fulvimarina pelagi HTCC2506]
gi|114537623|gb|EAU40748.1| single-strand DNA binding protein [Fulvimarina pelagi HTCC2506]
Length = 169
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + G+ + FS+ T +R E TE WHR
Sbjct: 5 VNKVILVGNLGADPEMRRTQDGKPIANFSVATSESWRDRNSGERREKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
V + E L V+ +++ GS +Y+EG L+ + +
Sbjct: 57 VVCFNEGLNKVIEQYVKKGSKVYIEGQLQTRKW 89
>gi|444921571|ref|ZP_21241406.1| Single-stranded DNA-binding protein [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507298|gb|ELV07475.1| Single-stranded DNA-binding protein [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 185
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P K + +G V ++ T +R + + TE WH
Sbjct: 4 GINKVILLGHLGRDPEVKYMPNGNAVANMTIATSESWKDRNSGQPQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L + ++L GS +Y+EG L+ + + D +G R EI + +GT
Sbjct: 56 RVVIFG-KLADIAGQYLRKGSLVYIEGQLQTRKWTDQ-SGQDRYTTEIVVNMSGT 108
>gi|299146726|ref|ZP_07039794.1| single-stranded binding protein [Bacteroides sp. 3_1_23]
gi|298517217|gb|EFI41098.1| single-stranded binding protein [Bacteroides sp. 3_1_23]
Length = 183
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K +G V F L T R +N T+ R +WH +
Sbjct: 29 KVILLGNVGQDPQVKYFDTGSAVATFRLAT-----TDRAYTLQNGTQVPERT--EWHNI- 80
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 81 VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 126
>gi|163752256|ref|ZP_02159456.1| single-strand binding protein [Shewanella benthica KT99]
gi|161327839|gb|EDP99019.1| single-strand binding protein [Shewanella benthica KT99]
Length = 227
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL + ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|399117093|emb|CCG19907.1| single-stranded DNA-binding protein [Taylorella asinigenitalis
14/45]
Length = 167
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G++G P + + R VT SLGT + N+R E TE WHR
Sbjct: 3 VNKVILIGRLGNDPDVRTGQDNRVVTRISLGTNLVWNDRNTGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ R V +L G+ +YVEG L+ + D
Sbjct: 55 V-VFFGRTAEVARDYLKKGAQVYVEGRLKTNKYQD 88
>gi|417225796|ref|ZP_12028965.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
gi|386198712|gb|EIH97704.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
Length = 375
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG++G+ P + + +G V + T +++ E TE WH
Sbjct: 203 GINKVIVVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 254
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 255 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 310
>gi|256855323|ref|YP_003162567.1| single-stranded binding protein Ssb [Escherichia coli]
gi|256275535|gb|ACU68808.1| single-stranded binding protein Ssb [Escherichia coli]
Length = 193
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|56692915|ref|YP_164279.1| single-stranded DNA-binding protein [Pseudomonas phage F116]
gi|48527501|gb|AAT45876.1| single-stranded DNA-binding protein [Pseudomonas phage F116]
Length = 167
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + G+ VT SL T +++ + + TE WH
Sbjct: 4 GVNKVILVGHLGQDPDARSTPGGKAVTSLSLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV ++ RL + ++L GS +Y+EG+L + +
Sbjct: 56 RVVLFG-RLAEIAAQYLRKGSQVYIEGSLRTRKWQ 89
>gi|365921047|ref|ZP_09445347.1| single-strand binding family protein [Cardiobacterium valvarum
F0432]
gi|364576835|gb|EHM54134.1| single-strand binding family protein [Cardiobacterium valvarum
F0432]
Length = 186
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P + + SG V S+ T N+R E TE WH
Sbjct: 3 GVNKVIIIGNLGNDPDMRYMPSGEAVANLSIATSETWNDRNTGEKREKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +L ++ ++ GS IY+EG L+ + + D +G R EI
Sbjct: 55 RVVAF-RKLAEIIGQYCKKGSKIYIEGKLQTRKWTDQ-SGQNRYTTEI 100
>gi|425741495|ref|ZP_18859641.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
gi|425492229|gb|EKU58495.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
Length = 201
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
ILVG +G+ P K +G ++T FS+ T + ++ E + TE WHR+ ++
Sbjct: 15 ILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERKEQTE--------WHRIVLH 66
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 67 -NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 107
>gi|425389436|ref|ZP_18772940.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408320637|gb|EKJ36726.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
Length = 178
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G++R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVIRYITEILVKTTGTMQML 113
>gi|308188967|ref|YP_003933098.1| single-stranded DNA-binding protein [Pantoea vagans C9-1]
gi|308059477|gb|ADO11649.1| Single-stranded DNA-binding protein [Pantoea vagans C9-1]
Length = 179
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQML 113
>gi|419902990|ref|ZP_14422131.1| single-stranded DNA-binding protein, partial [Escherichia coli
O26:H11 str. CVM9942]
gi|388372932|gb|EIL36306.1| single-stranded DNA-binding protein, partial [Escherichia coli
O26:H11 str. CVM9942]
Length = 144
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|261209951|ref|ZP_05924251.1| single-stranded DNA-binding protein [Vibrio sp. RC341]
gi|260841016|gb|EEX67548.1| single-stranded DNA-binding protein [Vibrio sp. RC341]
Length = 177
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|421827686|ref|ZP_16263021.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|408074044|gb|EKH08342.1| single-stranded DNA-binding protein [Escherichia coli PA7]
Length = 155
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|242238175|ref|YP_002986356.1| single-strand binding protein [Dickeya dadantii Ech703]
gi|242130232|gb|ACS84534.1| single-strand binding protein [Dickeya dadantii Ech703]
Length = 180
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILLGHLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EG L+ + + D +G R EI + GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEIVVNVGGT 109
>gi|225715432|gb|ACO13562.1| Single-stranded DNA-binding protein, mitochondrial precursor [Esox
lucius]
Length = 147
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENEN-PTEYANRCA 135
L+ I + L+G+VGQ PV ++++ VT+FS+ T + R E EN P + + +
Sbjct: 25 LEKSINRVQLLGRVGQDPVMRQVEGRNPVTIFSMATNEM---WRSGEVENSPADVSQKTT 81
Query: 136 VQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHRVS++ L V +++ GS + VEG L+ + D
Sbjct: 82 --WHRVSIFKPGLRDVAYQYVKKGSRVLVEGKLDYGEYVD 119
>gi|307544700|ref|YP_003897179.1| single-strand DNA-binding protein [Halomonas elongata DSM 2581]
gi|307216724|emb|CBV41994.1| K03111 single-strand DNA-binding protein [Halomonas elongata DSM
2581]
Length = 169
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VGQ P + +SG V +L T +++ + + TE WH
Sbjct: 4 GINKVILIGNVGQDPEIRFTQSGTPVGNINLATSDTWTDKQSGQRQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R+ V+ RL V +++ GS +YVEG L+ + + D +G R + EI +
Sbjct: 56 RLIVF-RRLAEVAQQYVRKGSKLYVEGRLQTRKWQDQ-SGQDRYVTEIIV 103
>gi|300900997|ref|ZP_07119119.1| single-strand binding family protein, partial [Escherichia coli MS
198-1]
gi|300355542|gb|EFJ71412.1| single-strand binding family protein [Escherichia coli MS 198-1]
Length = 193
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 23 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 74
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 75 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 130
>gi|153009529|ref|YP_001370744.1| ssDNA-binding protein [Ochrobactrum anthropi ATCC 49188]
gi|151561417|gb|ABS14915.1| single-strand binding protein [Ochrobactrum anthropi ATCC 49188]
Length = 172
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQSGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|39935881|ref|NP_948157.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
CGA009]
gi|192291528|ref|YP_001992133.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
TIE-1]
gi|39649735|emb|CAE28256.1| single-strand DNA-binding protein [Rhodopseudomonas palustris
CGA009]
gi|192285277|gb|ACF01658.1| single-strand binding protein [Rhodopseudomonas palustris TIE-1]
Length = 167
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSESWRDRATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLRKGAKVYIEGQLQTRKWTD 91
>gi|325272009|ref|ZP_08138454.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
gi|324102859|gb|EGC00261.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
Length = 182
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NGT
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDINGT 107
>gi|26987226|ref|NP_742651.1| single-stranded DNA-binding protein [Pseudomonas putida KT2440]
gi|148545770|ref|YP_001265872.1| single-stranded DNA-binding protein [Pseudomonas putida F1]
gi|167031530|ref|YP_001666761.1| single-stranded DNA-binding protein [Pseudomonas putida GB-1]
gi|386010144|ref|YP_005928421.1| Ssb [Pseudomonas putida BIRD-1]
gi|395446868|ref|YP_006387121.1| single-stranded DNA-binding protein [Pseudomonas putida ND6]
gi|397696230|ref|YP_006534113.1| Single-stranded DNA-binding protein [Pseudomonas putida DOT-T1E]
gi|421524863|ref|ZP_15971484.1| single-stranded DNA-binding protein [Pseudomonas putida LS46]
gi|37999418|sp|Q88QK5.1|SSB_PSEPK RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|24981865|gb|AAN66115.1|AE016239_10 single-stranded DNA-binding protein [Pseudomonas putida KT2440]
gi|148509828|gb|ABQ76688.1| single-strand binding protein [Pseudomonas putida F1]
gi|166858018|gb|ABY96425.1| single-strand binding protein [Pseudomonas putida GB-1]
gi|313496850|gb|ADR58216.1| Ssb [Pseudomonas putida BIRD-1]
gi|388560865|gb|AFK70006.1| single-stranded DNA-binding protein [Pseudomonas putida ND6]
gi|397332960|gb|AFO49319.1| Single-stranded DNA-binding protein [Pseudomonas putida DOT-T1E]
gi|402751326|gb|EJX11839.1| single-stranded DNA-binding protein [Pseudomonas putida LS46]
Length = 181
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NGT
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDINGT 107
>gi|226326600|ref|ZP_03802118.1| hypothetical protein PROPEN_00450 [Proteus penneri ATCC 35198]
gi|225205025|gb|EEG87379.1| single-strand binding family protein [Proteus penneri ATCC 35198]
Length = 210
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 41 GVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 92
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + GT
Sbjct: 93 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVNIGGT 145
>gi|3851548|gb|AAC72352.1| single strand DNA-binding protein [Vibrio cholerae C6706]
Length = 192
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 20 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 71
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 72 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 120
>gi|311275253|ref|XP_003134650.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 1 [Sus scrofa]
Length = 148
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENEAYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS +YVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRVYVEGKVDYGEYTD 121
>gi|339477740|ref|YP_004706560.1| single-strand DNA-binding protein [Candidatus Moranella endobia
PCIT]
gi|338172291|gb|AEI74692.1| single-strand DNA-binding protein [Candidatus Moranella endobia
PCIT]
Length = 186
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ+P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQNPEVRYMPNGGAVANITLATSDSWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV ++ +L V +++L GS +Y+EG L+ + + D +G R EI +
Sbjct: 57 RVVLFG-KLAEVAVEYLRKGSQVYIEGYLQTRKWQDQ-SGHDRYTTEIVV 104
>gi|153215386|ref|ZP_01949984.1| single-strand binding protein [Vibrio cholerae 1587]
gi|124114757|gb|EAY33577.1| single-strand binding protein [Vibrio cholerae 1587]
Length = 177
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|331675750|ref|ZP_08376468.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H591]
gi|331076524|gb|EGI47800.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H591]
Length = 186
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|229512671|ref|ZP_04402140.1| single-stranded DNA-binding protein [Vibrio cholerae TMA 21]
gi|229525090|ref|ZP_04414495.1| single-stranded DNA-binding protein [Vibrio cholerae bv. albensis
VL426]
gi|229530242|ref|ZP_04419630.1| single-stranded DNA-binding protein [Vibrio cholerae 12129(1)]
gi|297580535|ref|ZP_06942461.1| single strand DNA-binding protein [Vibrio cholerae RC385]
gi|229332015|gb|EEN97503.1| single-stranded DNA-binding protein [Vibrio cholerae 12129(1)]
gi|229338671|gb|EEO03688.1| single-stranded DNA-binding protein [Vibrio cholerae bv. albensis
VL426]
gi|229350348|gb|EEO15299.1| single-stranded DNA-binding protein [Vibrio cholerae TMA 21]
gi|297534951|gb|EFH73786.1| single strand DNA-binding protein [Vibrio cholerae RC385]
Length = 183
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 11 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 62
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 63 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 111
>gi|444728402|gb|ELW68860.1| Single-stranded DNA-binding protein, mitochondrial, partial [Tupaia
chinensis]
Length = 140
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 18 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENEVYQMGDVSQKT 74
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 75 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDK 114
>gi|37999366|sp|P77953.1|SSB_SHEHA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|1490779|gb|AAB57884.1| single stranded DNA-binding protein [Shewanella hanedai]
Length = 226
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQPQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL + ++L GS IY+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKIYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|424497190|ref|ZP_17944614.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390818432|gb|EIO84813.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
Length = 175
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|423713075|ref|ZP_17687335.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395424701|gb|EJF90881.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 171
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|417637202|ref|ZP_12287395.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|345380973|gb|EGX12864.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
Length = 176
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGITRYITEILVKTTGTMQML 113
>gi|226328532|ref|ZP_03804050.1| hypothetical protein PROPEN_02426 [Proteus penneri ATCC 35198]
gi|225203265|gb|EEG85619.1| single-strand binding family protein [Proteus penneri ATCC 35198]
Length = 165
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + L SG V ++ T +++ E E TE WHRV
Sbjct: 8 KVILIGNLGRDPEIRYLPSGGAVANLTVATSEKWRDKQTGETEKKTE--------WHRVV 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
++ +L + +L GS +Y+EG L+ + ++D G+ R E+ ++ G+
Sbjct: 60 LFG-KLADIASGYLCKGSQVYIEGQLQTREWDD--NGVKRYTTEVVVKVGGS 108
>gi|429907768|ref|ZP_19373735.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429396552|gb|EKZ32902.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9990]
Length = 175
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +LVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112
>gi|395793304|ref|ZP_10472709.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395431618|gb|EJF97636.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 171
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|422832090|ref|ZP_16880214.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|371615693|gb|EHO04086.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
Length = 175
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112
>gi|163867787|ref|YP_001608991.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017438|emb|CAK00996.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 152
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P K + SG + F L T ++ + TE WH V
Sbjct: 9 KVILIGYLGADPESKTMNSGAEIVNFRLATSESYTDKNTHQKVEKTE--------WHSVV 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+ L + +++L GS +YVEG L+ + + D
Sbjct: 61 VFNPYLAKIALQYLSKGSKVYVEGKLQTRKWQD 93
>gi|153802217|ref|ZP_01956803.1| single-strand binding protein [Vibrio cholerae MZO-3]
gi|153825660|ref|ZP_01978327.1| single-strand binding protein [Vibrio cholerae MZO-2]
gi|153829318|ref|ZP_01981985.1| single-strand binding protein [Vibrio cholerae 623-39]
gi|254291302|ref|ZP_04962096.1| single-strand binding protein [Vibrio cholerae AM-19226]
gi|262191515|ref|ZP_06049699.1| single-stranded DNA-binding protein [Vibrio cholerae CT 5369-93]
gi|384423702|ref|YP_005633060.1| ssDNA-binding protein [Vibrio cholerae LMA3984-4]
gi|417819280|ref|ZP_12465897.1| single-stranded DNA-binding protein [Vibrio cholerae HE39]
gi|417823533|ref|ZP_12470125.1| single-stranded DNA-binding protein [Vibrio cholerae HE48]
gi|419828972|ref|ZP_14352461.1| single-stranded DNA-binding family protein [Vibrio cholerae HC-1A2]
gi|419831752|ref|ZP_14355219.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-61A2]
gi|419835343|ref|ZP_14358788.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46B1]
gi|421342177|ref|ZP_15792584.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43B1]
gi|421350256|ref|ZP_15800622.1| single-stranded DNA-binding protein [Vibrio cholerae HE-25]
gi|422916134|ref|ZP_16950475.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02A1]
gi|422921648|ref|ZP_16954859.1| single-stranded DNA-binding protein [Vibrio cholerae BJG-01]
gi|423733704|ref|ZP_17706920.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-41B1]
gi|423816094|ref|ZP_17715080.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-55C2]
gi|423848157|ref|ZP_17718866.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-59A1]
gi|423878735|ref|ZP_17722473.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-60A1]
gi|423946433|ref|ZP_17733341.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-40]
gi|423975591|ref|ZP_17736889.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-46]
gi|423996554|ref|ZP_17739820.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02C1]
gi|424007988|ref|ZP_17750938.1| single-stranded DNA-binding protein [Vibrio cholerae HC-44C1]
gi|424015252|ref|ZP_17755102.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55B2]
gi|424018367|ref|ZP_17758169.1| single-stranded DNA-binding protein [Vibrio cholerae HC-59B1]
gi|424623740|ref|ZP_18062220.1| single-stranded DNA-binding protein [Vibrio cholerae HC-50A1]
gi|424628315|ref|ZP_18066624.1| single-stranded DNA-binding protein [Vibrio cholerae HC-51A1]
gi|424632268|ref|ZP_18070387.1| single-stranded DNA-binding protein [Vibrio cholerae HC-52A1]
gi|424635356|ref|ZP_18073380.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55A1]
gi|424639148|ref|ZP_18077048.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A1]
gi|424647431|ref|ZP_18085111.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A1]
gi|429886285|ref|ZP_19367845.1| Single-stranded DNA-binding protein [Vibrio cholerae PS15]
gi|443526286|ref|ZP_21092372.1| single-stranded DNA-binding protein [Vibrio cholerae HC-78A1]
gi|124122241|gb|EAY40984.1| single-strand binding protein [Vibrio cholerae MZO-3]
gi|148875218|gb|EDL73353.1| single-strand binding protein [Vibrio cholerae 623-39]
gi|149740690|gb|EDM54797.1| single-strand binding protein [Vibrio cholerae MZO-2]
gi|150422758|gb|EDN14711.1| single-strand binding protein [Vibrio cholerae AM-19226]
gi|262032613|gb|EEY51167.1| single-stranded DNA-binding protein [Vibrio cholerae CT 5369-93]
gi|327483255|gb|AEA77662.1| Single-stranded DNA-binding protein [Vibrio cholerae LMA3984-4]
gi|340041136|gb|EGR02103.1| single-stranded DNA-binding protein [Vibrio cholerae HE39]
gi|340048162|gb|EGR09084.1| single-stranded DNA-binding protein [Vibrio cholerae HE48]
gi|341640967|gb|EGS65541.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02A1]
gi|341648363|gb|EGS72426.1| single-stranded DNA-binding protein [Vibrio cholerae BJG-01]
gi|395945680|gb|EJH56345.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43B1]
gi|395954378|gb|EJH64988.1| single-stranded DNA-binding protein [Vibrio cholerae HE-25]
gi|408016310|gb|EKG53860.1| single-stranded DNA-binding protein [Vibrio cholerae HC-50A1]
gi|408021623|gb|EKG58864.1| single-stranded DNA-binding protein [Vibrio cholerae HC-52A1]
gi|408027735|gb|EKG64687.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A1]
gi|408027822|gb|EKG64768.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55A1]
gi|408037226|gb|EKG73625.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A1]
gi|408059296|gb|EKG94063.1| single-stranded DNA-binding protein [Vibrio cholerae HC-51A1]
gi|408622161|gb|EKK95149.1| single-stranded DNA-binding family protein [Vibrio cholerae HC-1A2]
gi|408631861|gb|EKL04377.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-41B1]
gi|408636765|gb|EKL08887.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-55C2]
gi|408644180|gb|EKL15881.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-60A1]
gi|408645283|gb|EKL16939.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-59A1]
gi|408652159|gb|EKL23384.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-61A2]
gi|408662136|gb|EKL33108.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-40]
gi|408666219|gb|EKL37015.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-46]
gi|408854831|gb|EKL94578.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02C1]
gi|408858756|gb|EKL98426.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46B1]
gi|408862154|gb|EKM01696.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55B2]
gi|408866275|gb|EKM05658.1| single-stranded DNA-binding protein [Vibrio cholerae HC-44C1]
gi|408870438|gb|EKM09716.1| single-stranded DNA-binding protein [Vibrio cholerae HC-59B1]
gi|429226802|gb|EKY32874.1| Single-stranded DNA-binding protein [Vibrio cholerae PS15]
gi|443455370|gb|ELT19151.1| single-stranded DNA-binding protein [Vibrio cholerae HC-78A1]
Length = 177
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|419882785|ref|ZP_14403976.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9545]
gi|388360529|gb|EIL24720.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9545]
Length = 215
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 45 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 96
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 97 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 152
>gi|17987163|ref|NP_539797.1| single-strand binding protein [Brucella melitensis bv. 1 str. 16M]
gi|260565636|ref|ZP_05836120.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|265991184|ref|ZP_06103741.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|37999451|sp|Q8YHC2.1|SSB_BRUME RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|17982830|gb|AAL52061.1| single-strand binding protein [Brucella melitensis bv. 1 str. 16M]
gi|260151704|gb|EEW86798.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|263001968|gb|EEZ14543.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 168
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|148255735|ref|YP_001240320.1| single-stranded DNA-binding protein [Bradyrhizobium sp. BTAi1]
gi|146407908|gb|ABQ36414.1| single-strand binding protein [Bradyrhizobium sp. BTAi1]
Length = 166
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L G+ +Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|9507481|ref|NP_052488.1| single-stranded DNA binding protein [Shigella sonnei]
gi|32470197|ref|NP_863421.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|194447180|ref|YP_002043888.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|300907627|ref|ZP_07125257.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|301307185|ref|ZP_07213210.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|410651579|ref|YP_006954701.1| single-stranded DNA-binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|410654715|ref|YP_006954602.1| single-stranded DNA binding protein [Salmonella enterica]
gi|415867803|ref|ZP_11539615.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|418818975|ref|ZP_13374438.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|422034292|ref|ZP_16380318.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|422962938|ref|ZP_16973033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|450202549|ref|ZP_21893471.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|134906|sp|P18022.3|SSBP_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
gi|144656|gb|AAA98056.1| single-stranded DNA-binding protein [Plasmid ColIb-P9]
gi|4512478|dbj|BAA75127.1| single-stranded DNA binding protein [Shigella sonnei]
gi|4688844|emb|CAB41502.1| SSB protein [Escherichia coli]
gi|20521565|dbj|BAB91629.1| single strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|70610212|gb|AAZ05359.1| single-stranded DNA binding protein [Salmonella enterica]
gi|194405484|gb|ACF65705.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|300400651|gb|EFJ84189.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|300837616|gb|EFK65376.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|315252769|gb|EFU32737.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|321271609|gb|ADW79697.1| single-stranded DNA-binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|371591843|gb|EHN80777.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|392784334|gb|EJA40936.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|414010289|gb|EKS94314.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|449312243|gb|EMD02511.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 175
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112
>gi|28198535|ref|NP_778849.1| single-stranded DNA-binding protein [Xylella fastidiosa Temecula1]
gi|182681214|ref|YP_001829374.1| single-stranded DNA-binding protein [Xylella fastidiosa M23]
gi|386084713|ref|YP_006000995.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558357|ref|ZP_12209339.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
gi|37999376|sp|Q87DQ5.1|SSB_XYLFT RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|28056619|gb|AAO28498.1| single-stranded DNA binding protein [Xylella fastidiosa Temecula1]
gi|182631324|gb|ACB92100.1| single-strand binding protein [Xylella fastidiosa M23]
gi|307579660|gb|ADN63629.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179161|gb|EGO82125.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
Length = 164
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G T+T SL T +R ++ E +WH
Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV + +LG + ++L GS Y+EG++ F
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYIEGSIRYDKF 87
>gi|227357651|ref|ZP_03842004.1| single-strand binding protein [Proteus mirabilis ATCC 29906]
gi|227162361|gb|EEI47365.1| single-strand binding protein [Proteus mirabilis ATCC 29906]
Length = 207
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 38 GVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 89
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + GT
Sbjct: 90 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVNIGGT 142
>gi|163868582|ref|YP_001609791.1| single-strand DNA binding protein [Bartonella tribocorum CIP
105476]
gi|161018238|emb|CAK01796.1| single-strand DNA binding protein [Bartonella tribocorum CIP
105476]
Length = 168
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGSDPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|71725314|ref|YP_272300.1| single-strand DNA-binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558904|gb|AAZ38113.1| single-strand binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 188
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + + + VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPEVRYMPNSTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KIAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYSTEIVVDMQGTMQLL 111
>gi|304398454|ref|ZP_07380327.1| single-strand binding protein [Pantoea sp. aB]
gi|440761190|ref|ZP_20940282.1| Single-stranded DNA-binding protein [Pantoea agglomerans 299R]
gi|304353959|gb|EFM18333.1| single-strand binding protein [Pantoea sp. aB]
gi|436425120|gb|ELP22865.1| Single-stranded DNA-binding protein [Pantoea agglomerans 299R]
Length = 183
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQML 113
>gi|157372672|ref|YP_001480661.1| single-strand binding protein [Serratia proteamaculans 568]
gi|157324436|gb|ABV43533.1| single-strand binding protein [Serratia proteamaculans 568]
Length = 181
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEIVVNVGGTMQML 113
>gi|15640424|ref|NP_230051.1| single-stranded DNA-binding protein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121587597|ref|ZP_01677362.1| single-strand binding protein [Vibrio cholerae 2740-80]
gi|121727262|ref|ZP_01680421.1| single-strand binding protein [Vibrio cholerae V52]
gi|147673244|ref|YP_001218665.1| single-stranded DNA-binding protein [Vibrio cholerae O395]
gi|153818249|ref|ZP_01970916.1| single-strand binding protein [Vibrio cholerae NCTC 8457]
gi|153822251|ref|ZP_01974918.1| single-strand binding protein [Vibrio cholerae B33]
gi|227080608|ref|YP_002809159.1| single-stranded DNA-binding protein [Vibrio cholerae M66-2]
gi|227116802|ref|YP_002818698.1| single-strand binding protein [Vibrio cholerae O395]
gi|255743783|ref|ZP_05417740.1| single-stranded DNA-binding protein [Vibrio cholera CIRS 101]
gi|262153604|ref|ZP_06028732.1| single-stranded DNA-binding protein [Vibrio cholerae INDRE 91/1]
gi|262167638|ref|ZP_06035342.1| single-stranded DNA-binding protein [Vibrio cholerae RC27]
gi|360037036|ref|YP_004938799.1| single-stranded DNA-binding protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740272|ref|YP_005332241.1| single-stranded DNA-binding protein [Vibrio cholerae IEC224]
gi|417812380|ref|ZP_12459040.1| single-stranded DNA-binding protein [Vibrio cholerae HC-49A2]
gi|417815244|ref|ZP_12461878.1| single-stranded DNA-binding protein [Vibrio cholerae HCUF01]
gi|418331103|ref|ZP_12942053.1| single-stranded DNA-binding protein [Vibrio cholerae HC-06A1]
gi|418336262|ref|ZP_12945161.1| single-stranded DNA-binding protein [Vibrio cholerae HC-23A1]
gi|418342642|ref|ZP_12949443.1| single-stranded DNA-binding protein [Vibrio cholerae HC-28A1]
gi|418347806|ref|ZP_12952542.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43A1]
gi|418354311|ref|ZP_12957035.1| single-stranded DNA-binding protein [Vibrio cholerae HC-61A1]
gi|419824868|ref|ZP_14348375.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1033(6)]
gi|421315772|ref|ZP_15766344.1| single-stranded DNA-binding protein [Vibrio cholerae CP1032(5)]
gi|421319184|ref|ZP_15769743.1| single-stranded DNA-binding protein [Vibrio cholerae CP1038(11)]
gi|421323218|ref|ZP_15773747.1| single-stranded DNA-binding protein [Vibrio cholerae CP1041(14)]
gi|421327625|ref|ZP_15778141.1| single-stranded DNA-binding protein [Vibrio cholerae CP1042(15)]
gi|421330624|ref|ZP_15781106.1| single-stranded DNA-binding protein [Vibrio cholerae CP1046(19)]
gi|421334220|ref|ZP_15784690.1| single-stranded DNA-binding protein [Vibrio cholerae CP1048(21)]
gi|421338120|ref|ZP_15788559.1| single-stranded DNA-binding protein [Vibrio cholerae HC-20A2]
gi|421345722|ref|ZP_15796107.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46A1]
gi|421353205|ref|ZP_15803539.1| single-stranded DNA-binding protein [Vibrio cholerae HE-45]
gi|422305824|ref|ZP_16393011.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1035(8)]
gi|422901236|ref|ZP_16936614.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48A1]
gi|422905420|ref|ZP_16940278.1| single-stranded DNA-binding protein [Vibrio cholerae HC-70A1]
gi|422912140|ref|ZP_16946670.1| single-stranded DNA-binding protein [Vibrio cholerae HFU-02]
gi|422924620|ref|ZP_16957658.1| single-stranded DNA-binding protein [Vibrio cholerae HC-38A1]
gi|423143667|ref|ZP_17131285.1| single-stranded DNA-binding protein [Vibrio cholerae HC-19A1]
gi|423148651|ref|ZP_17136012.1| single-stranded DNA-binding protein [Vibrio cholerae HC-21A1]
gi|423152441|ref|ZP_17139643.1| single-stranded DNA-binding protein [Vibrio cholerae HC-22A1]
gi|423155225|ref|ZP_17142364.1| single-stranded DNA-binding protein [Vibrio cholerae HC-32A1]
gi|423159084|ref|ZP_17146058.1| single-stranded DNA-binding protein [Vibrio cholerae HC-33A2]
gi|423163761|ref|ZP_17150558.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48B2]
gi|423747003|ref|ZP_17711291.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-50A2]
gi|423891613|ref|ZP_17725305.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-62A1]
gi|423926389|ref|ZP_17729922.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-77A1]
gi|424000944|ref|ZP_17744037.1| single-stranded DNA-binding protein [Vibrio cholerae HC-17A2]
gi|424005104|ref|ZP_17748092.1| single-stranded DNA-binding protein [Vibrio cholerae HC-37A1]
gi|424022899|ref|ZP_17762566.1| single-stranded DNA-binding protein [Vibrio cholerae HC-62B1]
gi|424025917|ref|ZP_17765537.1| single-stranded DNA-binding protein [Vibrio cholerae HC-69A1]
gi|424585298|ref|ZP_18024894.1| single-stranded DNA-binding protein [Vibrio cholerae CP1030(3)]
gi|424589674|ref|ZP_18029121.1| single-stranded DNA-binding protein [Vibrio cholerae CP1037(10)]
gi|424593919|ref|ZP_18033262.1| single-stranded DNA-binding protein [Vibrio cholerae CP1040(13)]
gi|424597853|ref|ZP_18037055.1| single-stranded DNA-binding protein [Vibrio Cholerae CP1044(17)]
gi|424600618|ref|ZP_18039777.1| single-stranded DNA-binding protein [Vibrio cholerae CP1047(20)]
gi|424605534|ref|ZP_18044502.1| single-stranded DNA-binding protein [Vibrio cholerae CP1050(23)]
gi|424609251|ref|ZP_18048114.1| single-stranded DNA-binding protein [Vibrio cholerae HC-39A1]
gi|424612169|ref|ZP_18050980.1| single-stranded DNA-binding protein [Vibrio cholerae HC-41A1]
gi|424616047|ref|ZP_18054742.1| single-stranded DNA-binding protein [Vibrio cholerae HC-42A1]
gi|424620807|ref|ZP_18059338.1| single-stranded DNA-binding protein [Vibrio cholerae HC-47A1]
gi|424643627|ref|ZP_18081385.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A2]
gi|424651547|ref|ZP_18089075.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A2]
gi|424655495|ref|ZP_18092801.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A2]
gi|440708602|ref|ZP_20889264.1| single-stranded DNA-binding protein [Vibrio cholerae 4260B]
gi|443502446|ref|ZP_21069439.1| single-stranded DNA-binding protein [Vibrio cholerae HC-64A1]
gi|443506353|ref|ZP_21073151.1| single-stranded DNA-binding protein [Vibrio cholerae HC-65A1]
gi|443510189|ref|ZP_21076861.1| single-stranded DNA-binding protein [Vibrio cholerae HC-67A1]
gi|443514025|ref|ZP_21080570.1| single-stranded DNA-binding protein [Vibrio cholerae HC-68A1]
gi|443517838|ref|ZP_21084261.1| single-stranded DNA-binding protein [Vibrio cholerae HC-71A1]
gi|443522420|ref|ZP_21088670.1| single-stranded DNA-binding protein [Vibrio cholerae HC-72A2]
gi|443530324|ref|ZP_21096340.1| single-stranded DNA-binding protein [Vibrio cholerae HC-7A1]
gi|443537679|ref|ZP_21103536.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A1]
gi|449054373|ref|ZP_21733041.1| Single-stranded DNA-binding protein [Vibrio cholerae O1 str. Inaba
G4222]
gi|37999465|sp|Q9KUW2.1|SSB_VIBCH RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|9654818|gb|AAF93570.1| single-strand binding protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548170|gb|EAX58242.1| single-strand binding protein [Vibrio cholerae 2740-80]
gi|121630381|gb|EAX62776.1| single-strand binding protein [Vibrio cholerae V52]
gi|126511208|gb|EAZ73802.1| single-strand binding protein [Vibrio cholerae NCTC 8457]
gi|126520207|gb|EAZ77430.1| single-strand binding protein [Vibrio cholerae B33]
gi|146315127|gb|ABQ19666.1| single-strand binding protein [Vibrio cholerae O395]
gi|227008496|gb|ACP04708.1| single-strand binding protein [Vibrio cholerae M66-2]
gi|227012252|gb|ACP08462.1| single-strand binding protein [Vibrio cholerae O395]
gi|255738532|gb|EET93920.1| single-stranded DNA-binding protein [Vibrio cholera CIRS 101]
gi|262023974|gb|EEY42671.1| single-stranded DNA-binding protein [Vibrio cholerae RC27]
gi|262030631|gb|EEY49267.1| single-stranded DNA-binding protein [Vibrio cholerae INDRE 91/1]
gi|340043230|gb|EGR04189.1| single-stranded DNA-binding protein [Vibrio cholerae HCUF01]
gi|340043760|gb|EGR04717.1| single-stranded DNA-binding protein [Vibrio cholerae HC-49A2]
gi|341625752|gb|EGS51179.1| single-stranded DNA-binding protein [Vibrio cholerae HC-70A1]
gi|341627124|gb|EGS52450.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48A1]
gi|341641327|gb|EGS65883.1| single-stranded DNA-binding protein [Vibrio cholerae HFU-02]
gi|341648678|gb|EGS72719.1| single-stranded DNA-binding protein [Vibrio cholerae HC-38A1]
gi|356421593|gb|EHH75087.1| single-stranded DNA-binding protein [Vibrio cholerae HC-06A1]
gi|356422059|gb|EHH75543.1| single-stranded DNA-binding protein [Vibrio cholerae HC-21A1]
gi|356426866|gb|EHH80149.1| single-stranded DNA-binding protein [Vibrio cholerae HC-19A1]
gi|356433043|gb|EHH86236.1| single-stranded DNA-binding protein [Vibrio cholerae HC-23A1]
gi|356434813|gb|EHH87980.1| single-stranded DNA-binding protein [Vibrio cholerae HC-22A1]
gi|356438103|gb|EHH91154.1| single-stranded DNA-binding protein [Vibrio cholerae HC-28A1]
gi|356443487|gb|EHH96308.1| single-stranded DNA-binding protein [Vibrio cholerae HC-32A1]
gi|356447917|gb|EHI00702.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43A1]
gi|356450533|gb|EHI03252.1| single-stranded DNA-binding protein [Vibrio cholerae HC-33A2]
gi|356454087|gb|EHI06742.1| single-stranded DNA-binding protein [Vibrio cholerae HC-61A1]
gi|356456547|gb|EHI09144.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48B2]
gi|356648190|gb|AET28245.1| single-stranded DNA-binding protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793782|gb|AFC57253.1| single-stranded DNA-binding protein [Vibrio cholerae IEC224]
gi|395922513|gb|EJH33329.1| single-stranded DNA-binding protein [Vibrio cholerae CP1032(5)]
gi|395923063|gb|EJH33875.1| single-stranded DNA-binding protein [Vibrio cholerae CP1041(14)]
gi|395925509|gb|EJH36306.1| single-stranded DNA-binding protein [Vibrio cholerae CP1038(11)]
gi|395931359|gb|EJH42104.1| single-stranded DNA-binding protein [Vibrio cholerae CP1042(15)]
gi|395934477|gb|EJH45215.1| single-stranded DNA-binding protein [Vibrio cholerae CP1046(19)]
gi|395937750|gb|EJH48461.1| single-stranded DNA-binding protein [Vibrio cholerae CP1048(21)]
gi|395946483|gb|EJH57146.1| single-stranded DNA-binding protein [Vibrio cholerae HC-20A2]
gi|395948391|gb|EJH59041.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46A1]
gi|395954978|gb|EJH65583.1| single-stranded DNA-binding protein [Vibrio cholerae HE-45]
gi|395964044|gb|EJH74286.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A2]
gi|395964277|gb|EJH74510.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A2]
gi|395967165|gb|EJH77265.1| single-stranded DNA-binding protein [Vibrio cholerae HC-42A1]
gi|395975726|gb|EJH85203.1| single-stranded DNA-binding protein [Vibrio cholerae HC-47A1]
gi|395977912|gb|EJH87304.1| single-stranded DNA-binding protein [Vibrio cholerae CP1030(3)]
gi|395979345|gb|EJH88697.1| single-stranded DNA-binding protein [Vibrio cholerae CP1047(20)]
gi|408010147|gb|EKG48019.1| single-stranded DNA-binding protein [Vibrio cholerae HC-39A1]
gi|408017079|gb|EKG54599.1| single-stranded DNA-binding protein [Vibrio cholerae HC-41A1]
gi|408036639|gb|EKG73061.1| single-stranded DNA-binding protein [Vibrio cholerae CP1037(10)]
gi|408037561|gb|EKG73949.1| single-stranded DNA-binding protein [Vibrio cholerae CP1040(13)]
gi|408045052|gb|EKG80921.1| single-stranded DNA-binding protein [Vibrio Cholerae CP1044(17)]
gi|408046960|gb|EKG82618.1| single-stranded DNA-binding protein [Vibrio cholerae CP1050(23)]
gi|408057596|gb|EKG92436.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A2]
gi|408611892|gb|EKK85248.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1033(6)]
gi|408628016|gb|EKL00796.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1035(8)]
gi|408643022|gb|EKL14762.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-50A2]
gi|408659005|gb|EKL30061.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-77A1]
gi|408660041|gb|EKL31071.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-62A1]
gi|408849312|gb|EKL89334.1| single-stranded DNA-binding protein [Vibrio cholerae HC-37A1]
gi|408849807|gb|EKL89810.1| single-stranded DNA-binding protein [Vibrio cholerae HC-17A2]
gi|408874533|gb|EKM13703.1| single-stranded DNA-binding protein [Vibrio cholerae HC-62B1]
gi|408881482|gb|EKM20363.1| single-stranded DNA-binding protein [Vibrio cholerae HC-69A1]
gi|439975869|gb|ELP51971.1| single-stranded DNA-binding protein [Vibrio cholerae 4260B]
gi|443433146|gb|ELS75663.1| single-stranded DNA-binding protein [Vibrio cholerae HC-64A1]
gi|443436977|gb|ELS83086.1| single-stranded DNA-binding protein [Vibrio cholerae HC-65A1]
gi|443440763|gb|ELS90444.1| single-stranded DNA-binding protein [Vibrio cholerae HC-67A1]
gi|443444630|gb|ELS97898.1| single-stranded DNA-binding protein [Vibrio cholerae HC-68A1]
gi|443448468|gb|ELT05097.1| single-stranded DNA-binding protein [Vibrio cholerae HC-71A1]
gi|443451489|gb|ELT11743.1| single-stranded DNA-binding protein [Vibrio cholerae HC-72A2]
gi|443458525|gb|ELT25920.1| single-stranded DNA-binding protein [Vibrio cholerae HC-7A1]
gi|443466504|gb|ELT41161.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A1]
gi|448266166|gb|EMB03396.1| Single-stranded DNA-binding protein [Vibrio cholerae O1 str. Inaba
G4222]
Length = 177
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|86749830|ref|YP_486326.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
HaA2]
gi|86572858|gb|ABD07415.1| single-strand binding protein [Rhodopseudomonas palustris HaA2]
Length = 167
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSESWRDRATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKVYLEGQLQTRKWTD 91
>gi|395233267|ref|ZP_10411509.1| single-stranded DNA-binding protein [Enterobacter sp. Ag1]
gi|394732313|gb|EJF32008.1| single-stranded DNA-binding protein [Enterobacter sp. Ag1]
Length = 176
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|296100204|ref|YP_003617121.1| single-strand DNA-binding protein [Pseudomonas putida]
gi|295443570|dbj|BAJ06449.1| single-strand DNA-binding protein [Pseudomonas putida]
Length = 171
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQG 106
>gi|229507037|ref|ZP_04396543.1| single-stranded DNA-binding protein [Vibrio cholerae BX 330286]
gi|229508808|ref|ZP_04398300.1| single-stranded DNA-binding protein [Vibrio cholerae B33]
gi|229519796|ref|ZP_04409239.1| single-stranded DNA-binding protein [Vibrio cholerae RC9]
gi|229520042|ref|ZP_04409471.1| single-stranded DNA-binding protein [Vibrio cholerae TM 11079-80]
gi|229606321|ref|YP_002876969.1| single-stranded DNA-binding protein [Vibrio cholerae MJ-1236]
gi|254850629|ref|ZP_05239979.1| single strand DNA-binding protein [Vibrio cholerae MO10]
gi|298501070|ref|ZP_07010871.1| single strand DNA-binding protein [Vibrio cholerae MAK 757]
gi|229342991|gb|EEO07980.1| single-stranded DNA-binding protein [Vibrio cholerae TM 11079-80]
gi|229344485|gb|EEO09460.1| single-stranded DNA-binding protein [Vibrio cholerae RC9]
gi|229354211|gb|EEO19142.1| single-stranded DNA-binding protein [Vibrio cholerae B33]
gi|229355782|gb|EEO20702.1| single-stranded DNA-binding protein [Vibrio cholerae BX 330286]
gi|229368976|gb|ACQ59399.1| single-stranded DNA-binding protein [Vibrio cholerae MJ-1236]
gi|254846334|gb|EET24748.1| single strand DNA-binding protein [Vibrio cholerae MO10]
gi|297540318|gb|EFH76378.1| single strand DNA-binding protein [Vibrio cholerae MAK 757]
Length = 183
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 11 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 62
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 63 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 111
>gi|29653623|ref|NP_819315.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 493]
gi|154707576|ref|YP_001425151.1| single-strand DNA binding protein [Coxiella burnetii Dugway
5J108-111]
gi|164686023|ref|ZP_01947649.2| single-stranded DNA-binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218103|ref|YP_002304890.1| single-strand DNA binding protein [Coxiella burnetii CbuK_Q154]
gi|37999375|sp|Q83EP4.1|SSB_COXBU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|29540885|gb|AAO89829.1| single-strand DNA binding protein [Coxiella burnetii RSA 493]
gi|154356862|gb|ABS78324.1| single-strand DNA binding protein [Coxiella burnetii Dugway
5J108-111]
gi|164601569|gb|EAX31729.2| single-stranded DNA-binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012365|gb|ACJ19745.1| single-strand DNA binding protein [Coxiella burnetii CbuK_Q154]
Length = 158
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + +G V +L T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R++ + RL +V ++L GS IY+EG+L + + D G+ R EI
Sbjct: 56 RIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 101
>gi|410664338|ref|YP_006916709.1| single-stranded DNA-binding protein [Simiduia agarivorans SA1 = DSM
21679]
gi|409026695|gb|AFU98979.1| single-stranded DNA-binding protein [Simiduia agarivorans SA1 = DSM
21679]
Length = 172
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P K + SG VT S+ T +++ + + TE WH
Sbjct: 4 GINKVILVGNLGQDPETKYMPSGGAVTNVSIATSETWKDKQTGQPQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ RL + ++L GS +YVEG+L
Sbjct: 56 RV-VFFNRLAEIAGEYLKKGSKVYVEGSL 83
>gi|326388330|ref|ZP_08209926.1| single-stranded DNA-binding protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207062|gb|EGD57883.1| single-stranded DNA-binding protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 197
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++G V + T +R E + TE WH
Sbjct: 12 VNKVILVGNLGADPEVRSFQNGGKVCNLRIATSESWKDRNSGERQERTE--------WHS 63
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ E L GV + L GS IYVEG L + + D G R E+ ++ G L
Sbjct: 64 VAIFGEGLVGVAERFLRKGSKIYVEGQLRTRKWQDQ-NGQDRYTTEVVLQGPGAVLTML 121
>gi|49474367|ref|YP_032409.1| single-strand binding protein (ssb) [Bartonella quintana str.
Toulouse]
gi|403530655|ref|YP_006665184.1| single-strand binding protein (ssb) [Bartonella quintana RM-11]
gi|49239871|emb|CAF26269.1| Single-strand binding protein (ssb) [Bartonella quintana str.
Toulouse]
gi|403232726|gb|AFR26469.1| single-strand binding protein (ssb) [Bartonella quintana RM-11]
Length = 172
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|372275604|ref|ZP_09511640.1| single-stranded DNA-binding protein [Pantoea sp. SL1_M5]
gi|390437567|ref|ZP_10226105.1| single-stranded DNA-binding protein [Pantoea agglomerans IG1]
Length = 187
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + GT +
Sbjct: 57 RVVLF-GKLAEVAGEYLKKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQML 113
>gi|375256401|ref|YP_005015568.1| single-strand binding protein [Tannerella forsythia ATCC 43037]
gi|363406465|gb|AEW20151.1| single-strand binding protein [Tannerella forsythia ATCC 43037]
Length = 149
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + SG V FSL T N R + N TE R +WH +
Sbjct: 5 KVILIGNVGKDPDVRYFDSGNAVANFSLAT-----NERGYKLANGTEIPERT--EWHNIV 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
ER V +++ GS +Y+EG + + ++D G+ R + EI R
Sbjct: 58 ANRER-AQFVERYVKKGSMVYIEGKIRTRNYDDQ-NGIKRYVTEIHADR 104
>gi|417594808|ref|ZP_12245487.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
gi|345364135|gb|EGW96269.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
Length = 150
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|197284784|ref|YP_002150656.1| single-strand binding protein [Proteus mirabilis HI4320]
gi|194682271|emb|CAR42014.1| single-strand binding protein [Proteus mirabilis HI4320]
Length = 165
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + L SG V ++ T +++ EN TE WHRV
Sbjct: 8 KVILIGNLGRDPEIRYLPSGGAVANLAVATSEKWRDKQTGENREKTE--------WHRVV 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
++ +L + +L GS +Y+EG L+ + ++D G+ R EI ++ G+
Sbjct: 60 LFG-KLADIASGYLCKGSQVYIEGQLQTREWDD--NGVKRYTTEIVVKIGGS 108
>gi|94498072|ref|ZP_01304635.1| single-strand binding protein [Sphingomonas sp. SKA58]
gi|94422507|gb|EAT07545.1| single-strand binding protein [Sphingomonas sp. SKA58]
Length = 198
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGADPEVKSFQNGGKVCNLRIATSESWKDRMTGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ E L GV + L GS +Y+EG L + + D +G R E+ ++ G+ L
Sbjct: 57 VAIFSEGLVGVAERFLRKGSKVYIEGQLRTRKWQDQ-SGNDRYTTEVVLQGLGSVLTML 114
>gi|451942145|ref|YP_007462782.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901532|gb|AGF75994.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 172
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|423712836|ref|ZP_17687134.1| single-strand binding protein [Bartonella washoensis Sb944nv]
gi|395410532|gb|EJF77086.1| single-strand binding protein [Bartonella washoensis Sb944nv]
Length = 172
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQK 106
>gi|398353827|ref|YP_006399291.1| single-stranded DNA-binding protein [Sinorhizobium fredii USDA 257]
gi|390129153|gb|AFL52534.1| single-stranded DNA-binding protein [Sinorhizobium fredii USDA 257]
Length = 170
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R E+ ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYTTEVVLQ 105
>gi|240850554|ref|YP_002971954.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267677|gb|ACS51265.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 142
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
+L+G++G P K + SG V FS+ T ++ + TE WH V ++
Sbjct: 1 MLIGRLGADPESKTMNSGTEVVNFSIATSESYTDKNTHQKVEKTE--------WHSVVIF 52
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
L + +++L GS +YVEG L+ + + D G R EI +
Sbjct: 53 NPHLAKIALQYLNKGSKVYVEGKLQTRKWQDK-NGHDRYTTEIVL 96
>gi|417149103|ref|ZP_11989194.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
gi|386161324|gb|EIH23127.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
Length = 186
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GVNKVILIGHLGQDPEIRYFPNGGGAVANLTLATTDTWRDKQSGEMKEHTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
HRV +Y +L +V ++L GS +Y+EG L + + D G+ R E+ + NGT +
Sbjct: 57 HRVVIYG-KLAEIVGEYLRKGSQVYIEGQLRTRKWFDQQNGVDRYSTEVVVSVNGTLQML 115
>gi|383813036|ref|ZP_09968463.1| single-stranded DNA-binding protein [Serratia sp. M24T3]
gi|383298446|gb|EIC86753.1| single-stranded DNA-binding protein [Serratia sp. M24T3]
Length = 182
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEIVVNVGGTMQML 113
>gi|335037923|ref|ZP_08531222.1| single-strand DNA-binding protein [Agrobacterium sp. ATCC 31749]
gi|333790587|gb|EGL61985.1| single-strand DNA-binding protein [Agrobacterium sp. ATCC 31749]
Length = 191
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 19 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 70
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 71 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 119
>gi|325981395|ref|YP_004293797.1| single-strand binding protein [Nitrosomonas sp. AL212]
gi|325530914|gb|ADZ25635.1| single-strand binding protein [Nitrosomonas sp. AL212]
Length = 150
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + + SG VT +L T ++ + E +WHR
Sbjct: 4 VNKVILIGNLGKDPETRYMSSGDAVTNITLATTDTWKDKNGEKQER---------TEWHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V+ Y +L + ++L G ++Y+EG LE + + D +G+ R +I
Sbjct: 55 VTFY-RKLAEIAGEYLKKGRSVYIEGRLETRKWTDK-SGVERYTTDI 99
>gi|115524894|ref|YP_781805.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
BisA53]
gi|115518841|gb|ABJ06825.1| single-strand binding protein [Rhodopseudomonas palustris BisA53]
Length = 166
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T ++ E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L VV ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCRVVEQYLKKGAKVYIEGQLQTRKWTD 91
>gi|428942403|ref|ZP_19015400.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
VA360]
gi|426298772|gb|EKV61154.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
VA360]
Length = 138
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGT 109
>gi|347447803|pdb|3TQY|A Chain A, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447804|pdb|3TQY|B Chain B, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447805|pdb|3TQY|C Chain C, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447806|pdb|3TQY|D Chain D, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
Length = 158
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + +G V +L T +++ E + TE WH
Sbjct: 7 GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE--------WH 58
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R++ + RL +V ++L GS IY+EG+L + + D G+ R EI
Sbjct: 59 RIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 104
>gi|291615826|ref|YP_003518568.1| Ssb [Pantoea ananatis LMG 20103]
gi|378769103|ref|YP_005197578.1| ssDNA-binding protein [Pantoea ananatis LMG 5342]
gi|386018007|ref|YP_005936308.1| ssDNA-binding protein [Pantoea ananatis AJ13355]
gi|386081182|ref|YP_005994707.1| ssDNA-binding protein [Pantoea ananatis PA13]
gi|291150856|gb|ADD75440.1| Ssb [Pantoea ananatis LMG 20103]
gi|327396090|dbj|BAK13512.1| single-strand binding protein Ssb [Pantoea ananatis AJ13355]
gi|354990363|gb|AER34487.1| single-strand binding protein Ssb [Pantoea ananatis PA13]
gi|365188591|emb|CCF11541.1| Single-stranded DNA-binding protein [Pantoea ananatis LMG 5342]
Length = 181
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQML 113
>gi|262045536|ref|ZP_06018557.1| single-strand binding protein, partial [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|449060388|ref|ZP_21738047.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
hvKP1]
gi|259037095|gb|EEW38345.1| single-strand binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|448873893|gb|EMB08961.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
hvKP1]
Length = 131
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGT 109
>gi|91206337|ref|YP_538691.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|218692910|ref|YP_002406022.1| single-stranded DNA-binding protein [Escherichia coli UMN026]
gi|422383460|ref|ZP_16463610.1| single-strand binding family protein [Escherichia coli MS 57-2]
gi|91075788|gb|ABE10668.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|218350073|emb|CAQ87490.1| Single-stranded DNA-binding protei [Escherichia coli UMN026]
gi|324005340|gb|EGB74559.1| single-strand binding family protein [Escherichia coli MS 57-2]
Length = 188
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|1490783|gb|AAB57886.1| single stranded DNA-binding protein [Shewanella sp. F1A]
Length = 231
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL V ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEVAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|71728618|gb|EAO30769.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGND---GQDRYVTEI 100
>gi|429212604|ref|ZP_19203769.1| single-stranded DNA-binding protein [Pseudomonas sp. M1]
gi|428157086|gb|EKX03634.1| single-stranded DNA-binding protein [Pseudomonas sp. M1]
Length = 165
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + L +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYLPNGNAVTNVTLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ RL +V +++ GS IYVEG+L + + G R EI + NG +
Sbjct: 56 RV-VFFGRLAEIVAEYVRKGSQIYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLL 112
>gi|339485418|ref|YP_004699946.1| single-stranded DNA-binding protein [Pseudomonas putida S16]
gi|431800538|ref|YP_007227441.1| single-stranded DNA-binding protein [Pseudomonas putida HB3267]
gi|338836261|gb|AEJ11066.1| single-stranded DNA-binding protein [Pseudomonas putida S16]
gi|430791303|gb|AGA71498.1| single-stranded DNA-binding protein [Pseudomonas putida HB3267]
Length = 180
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NGT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLL 111
>gi|270208475|ref|YP_003329249.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|348589228|ref|YP_004870031.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410592420|ref|YP_006952217.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609342|ref|YP_006953301.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609442|ref|YP_006953400.1| single-stranded DNA-binding protein [Escherichia coli]
gi|218546511|gb|ACK98900.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|301333124|gb|ADK71071.1| single-stranded DNA-binding protein [Escherichia coli]
gi|346987312|gb|AEO51454.1| single-stranded DNA-binding protein [Escherichia coli]
gi|346987412|gb|AEO51553.1| single-stranded DNA-binding protein [Escherichia coli]
gi|347550326|gb|AEP03723.1| single-stranded DNA-binding protein [Escherichia coli]
Length = 173
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|183600864|ref|ZP_02962357.1| hypothetical protein PROSTU_04464 [Providencia stuartii ATCC 25827]
gi|188019647|gb|EDU57687.1| single-strand binding family protein [Providencia stuartii ATCC
25827]
Length = 157
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGHLGQDPEIRYMPNGGAVANLALATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG+L+ + + D +G R E+ + GT +
Sbjct: 57 RVVIFG-KLAEIADEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNVGGTMQML 113
>gi|22124496|ref|NP_667919.1| single-stranded DNA-binding protein [Yersinia pestis KIM10+]
gi|45440334|ref|NP_991873.1| single-stranded DNA-binding protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51594734|ref|YP_068925.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis IP
32953]
gi|108809950|ref|YP_653866.1| single-stranded DNA-binding protein [Yersinia pestis Antiqua]
gi|108813505|ref|YP_649272.1| single-stranded DNA-binding protein [Yersinia pestis Nepal516]
gi|145600894|ref|YP_001164970.1| single-stranded DNA-binding protein [Yersinia pestis Pestoides F]
gi|150260629|ref|ZP_01917357.1| single-strand binding protein [Yersinia pestis CA88-4125]
gi|153949889|ref|YP_001402714.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis IP
31758]
gi|162419729|ref|YP_001605325.1| single-stranded DNA-binding protein [Yersinia pestis Angola]
gi|165926670|ref|ZP_02222502.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936564|ref|ZP_02225132.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010586|ref|ZP_02231484.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213923|ref|ZP_02239958.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402473|ref|ZP_02307930.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419378|ref|ZP_02311131.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426200|ref|ZP_02317953.1| single-strand binding protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170026063|ref|YP_001722568.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis
YPIII]
gi|186893737|ref|YP_001870849.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis
PB1/+]
gi|218927530|ref|YP_002345405.1| single-stranded DNA-binding protein [Yersinia pestis CO92]
gi|229836582|ref|ZP_04456748.1| Single-stranded DNA-binding protein [Yersinia pestis Pestoides A]
gi|229840190|ref|ZP_04460349.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842272|ref|ZP_04462427.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903990|ref|ZP_04519103.1| Single-stranded DNA-binding protein [Yersinia pestis Nepal516]
gi|294502390|ref|YP_003566452.1| single-strand DNA-binding protein [Yersinia pestis Z176003]
gi|384120877|ref|YP_005503497.1| single-strand DNA-binding protein [Yersinia pestis D106004]
gi|384124755|ref|YP_005507369.1| single-strand DNA-binding protein [Yersinia pestis D182038]
gi|384137696|ref|YP_005520398.1| single-stranded DNA-binding protein [Yersinia pestis A1122]
gi|384413307|ref|YP_005622669.1| ssDNA-binding protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420614788|ref|ZP_15105808.1| single-stranded DNA-binding family protein [Yersinia pestis PY-14]
gi|420700025|ref|ZP_15182238.1| single-stranded DNA-binding family protein [Yersinia pestis PY-54]
gi|421761752|ref|ZP_16198552.1| single-stranded DNA-binding protein [Yersinia pestis INS]
gi|37999452|sp|Q8ZJ06.1|SSB_YERPE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21957289|gb|AAM84170.1|AE013660_5 ssDNA-binding protein [Yersinia pestis KIM10+]
gi|45435190|gb|AAS60750.1| single-strand binding protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588016|emb|CAH19620.1| single-strand binding protein [Yersinia pseudotuberculosis IP
32953]
gi|108777153|gb|ABG19672.1| single-strand binding protein [Yersinia pestis Nepal516]
gi|108781863|gb|ABG15921.1| single-strand binding protein [Yersinia pestis Antiqua]
gi|115346141|emb|CAL19009.1| single-strand binding protein [Yersinia pestis CO92]
gi|145212590|gb|ABP41997.1| single-strand binding protein [Yersinia pestis Pestoides F]
gi|149290037|gb|EDM40114.1| single-strand binding protein [Yersinia pestis CA88-4125]
gi|152961384|gb|ABS48845.1| single-strand binding protein [Yersinia pseudotuberculosis IP
31758]
gi|162352544|gb|ABX86492.1| single-strand binding protein [Yersinia pestis Angola]
gi|165915680|gb|EDR34289.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921293|gb|EDR38517.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990676|gb|EDR42977.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204898|gb|EDR49378.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963372|gb|EDR59393.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048161|gb|EDR59569.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054911|gb|EDR64713.1| single-strand binding protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169752597|gb|ACA70115.1| single-strand binding protein [Yersinia pseudotuberculosis YPIII]
gi|186696763|gb|ACC87392.1| single-strand binding protein [Yersinia pseudotuberculosis PB1/+]
gi|229679760|gb|EEO75863.1| Single-stranded DNA-binding protein [Yersinia pestis Nepal516]
gi|229690582|gb|EEO82636.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696556|gb|EEO86603.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706266|gb|EEO92274.1| Single-stranded DNA-binding protein [Yersinia pestis Pestoides A]
gi|262360473|gb|ACY57194.1| single-strand DNA-binding protein [Yersinia pestis D106004]
gi|262364419|gb|ACY60976.1| single-strand DNA-binding protein [Yersinia pestis D182038]
gi|294352849|gb|ADE63190.1| single-strand DNA-binding protein [Yersinia pestis Z176003]
gi|320013811|gb|ADV97382.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342852825|gb|AEL71378.1| single-stranded DNA-binding protein [Yersinia pestis A1122]
gi|391501439|gb|EIR55844.1| single-stranded DNA-binding family protein [Yersinia pestis PY-14]
gi|391592121|gb|EIS36598.1| single-stranded DNA-binding family protein [Yersinia pestis PY-54]
gi|411178074|gb|EKS48086.1| single-stranded DNA-binding protein [Yersinia pestis INS]
Length = 182
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|432556026|ref|ZP_19792740.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
gi|431080447|gb|ELD87246.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
Length = 154
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + L +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYLPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|159184791|ref|NP_354518.2| single-strand DNA binding protein [Agrobacterium fabrum str. C58]
gi|37999448|sp|Q8UF87.2|SSB_AGRT5 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|159140079|gb|AAK87303.2| single-strand DNA binding protein [Agrobacterium fabrum str. C58]
Length = 173
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 105
>gi|423729782|ref|ZP_17703103.1| single-stranded DNA-binding family protein, partial [Vibrio
cholerae HC-17A1]
gi|408627797|gb|EKL00596.1| single-stranded DNA-binding family protein, partial [Vibrio
cholerae HC-17A1]
Length = 176
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|222085984|ref|YP_002544516.1| single-stranded DNA-binding protein [Agrobacterium radiobacter K84]
gi|398379925|ref|ZP_10538043.1| single stranded DNA-binding protein [Rhizobium sp. AP16]
gi|221723432|gb|ACM26588.1| single-strand DNA binding protein [Agrobacterium radiobacter K84]
gi|397721241|gb|EJK81789.1| single stranded DNA-binding protein [Rhizobium sp. AP16]
Length = 182
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + ++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIANLNIATSETWRDRNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|425067265|ref|ZP_18470381.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
gi|404601096|gb|EKB01509.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
Length = 179
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGHLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +++EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVCIFG-KLAEIAGEYLRKGSQVFIEGQLQTRKWTDQ-SGQDRYTTEVVVNIGGTMQML 113
>gi|365857508|ref|ZP_09397497.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
gi|363715937|gb|EHL99354.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
Length = 160
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K L+G +G+ P + ++G V + T +R E +WH
Sbjct: 4 VNKVTLIGNLGRDPEVRSFQNGGRVVNLRIATTETYKDREGNRQEK---------TEWHS 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ E+LG + K L GS +Y+EG LE + + D G R EI +R G+ L+
Sbjct: 55 VAIFNEKLGEIAEKCLRKGSKVYLEGKLETRKWTDQ-QGQERYSTEIVLRPFGSELVLL 112
>gi|324120132|ref|YP_004249893.1| single-strand binding protein [Klebsiella pneumoniae]
gi|323388260|gb|ADX60409.1| single-strand binding protein [Klebsiella pneumoniae]
Length = 180
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D + R + E+ + +NGT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDDAE-VTRYVTEVLVGQNGTMQML 113
>gi|422323485|ref|ZP_16404524.1| single-stranded DNA-binding protein, partial [Achromobacter
xylosoxidans C54]
gi|317401533|gb|EFV82163.1| single-stranded DNA-binding protein [Achromobacter xylosoxidans
C54]
Length = 166
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 57 SPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIR 116
+ T+ +G Q++ +NG+ + K ILVG +G+ P + G + S+ T
Sbjct: 17 AATRGTGCQQQR-----DNGM-ASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTW 70
Query: 117 NNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
++ E TE WHRV +Y RL + ++L G ++Y+EG L+ + + D
Sbjct: 71 KDKASGERREETE--------WHRVVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDK 121
Query: 177 ITGLVRRIREI 187
TG R EI
Sbjct: 122 DTGADRYSTEI 132
>gi|209885356|ref|YP_002289213.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|337741022|ref|YP_004632750.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
gi|386030039|ref|YP_005950814.1| ssDNA-binding protein [Oligotropha carboxidovorans OM4]
gi|209873552|gb|ACI93348.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|336095107|gb|AEI02933.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM4]
gi|336098686|gb|AEI06509.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
Length = 160
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPDVRRTQDGRPIVNLSIATSDTWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCRVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|148555367|ref|YP_001262949.1| single-strand binding protein [Sphingomonas wittichii RW1]
gi|148500557|gb|ABQ68811.1| single-strand binding protein [Sphingomonas wittichii RW1]
Length = 195
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGRDPESRSFQNGGKVVNLRVATSEQWKDRNTGERRDKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+++ E L V ++L GS +Y+EG L+ + + D
Sbjct: 57 VAIFNEALANVAERYLRKGSKVYLEGQLQTRKWTD 91
>gi|197286576|ref|YP_002152448.1| single-strand binding protein [Proteus mirabilis HI4320]
gi|425069688|ref|ZP_18472803.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
gi|425071141|ref|ZP_18474247.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
gi|134914|sp|P28046.2|SSB_PROMI RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|45638|emb|CAA46206.1| single-stranded DNA-binding protein [Proteus mirabilis]
gi|194684063|emb|CAR45413.1| single-strand binding protein [Proteus mirabilis HI4320]
gi|404596264|gb|EKA96785.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
gi|404599966|gb|EKB00419.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
Length = 174
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVNIGGTMQML 113
>gi|440226631|ref|YP_007333722.1| single-stranded DNA-binding protein [Rhizobium tropici CIAT 899]
gi|440038142|gb|AGB71176.1| single-stranded DNA-binding protein [Rhizobium tropici CIAT 899]
Length = 191
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + ++ T +R E + TE WHR
Sbjct: 13 VNKVILVGNLGADPEIRRTQDGRPIANLNIATSETWRDRNSGERKEKTE--------WHR 64
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 65 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWQD 99
>gi|365885618|ref|ZP_09424609.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 375]
gi|365285723|emb|CCD97140.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 375]
Length = 165
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|385786240|ref|YP_005817349.1| ssDNA-binding protein [Erwinia sp. Ejp617]
gi|310765512|gb|ADP10462.1| Single-stranded DNA-binding protein [Erwinia sp. Ejp617]
Length = 181
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|331668069|ref|ZP_08368921.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA271]
gi|418044252|ref|ZP_12682387.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
gi|331064583|gb|EGI36490.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA271]
gi|383472850|gb|EID64894.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
Length = 179
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|294677342|ref|YP_003577957.1| single-stranded DNA-binding protein [Rhodobacter capsulatus SB
1003]
gi|294476162|gb|ADE85550.1| single-stranded DNA-binding protein-1 [Rhodobacter capsulatus SB
1003]
Length = 175
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +G V + T +++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTFANGGKVCNLRIATSETWRDKQSGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L + ++L GST+Y+EG LE + + D G R E+ +R
Sbjct: 57 VAIFNEPLAKIAEQYLRKGSTVYIEGQLETRKWTDQ-QGQERYTTEVVLR 105
>gi|259909919|ref|YP_002650275.1| ssDNA-binding protein [Erwinia pyrifoliae Ep1/96]
gi|387872909|ref|YP_005804296.1| protein ssb [Erwinia pyrifoliae DSM 12163]
gi|224965541|emb|CAX57073.1| Single-stranded DNA-binding protein [Erwinia pyrifoliae Ep1/96]
gi|283480009|emb|CAY75925.1| ssb [Erwinia pyrifoliae DSM 12163]
Length = 183
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|1490781|gb|AAB57885.1| single stranded DNA-binding protein [Shewanella sp. PT99]
Length = 227
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL + ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|21233694|ref|NP_639992.1| Single-strand DNA binding protein [Proteus vulgaris]
gi|21202878|dbj|BAB93594.1| Single-strand DNA binding protein [Proteus vulgaris]
Length = 154
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG++GQ P + +G +V S+ T +++ E TE WH
Sbjct: 5 GVNKVIIVGKLGQDPEVHAMANGGSVANISVATSETWRDKQTGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L VV ++L GS IY+EG L + + D +G R E+ +
Sbjct: 57 RV-VFFGKLADVVGEYLRKGSQIYIEGQLSTRKWQDQ-SGADRYTTEVVV 104
>gi|291408145|ref|XP_002720318.1| PREDICTED: single-stranded DNA binding protein 1 [Oryctolagus
cuniculus]
Length = 148
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R +NE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGDNETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFQPGLRDVAYQYVKKGSRIYVEGKVDYGEYMD 121
>gi|209964376|ref|YP_002297291.1| ssDNA-binding protein [Rhodospirillum centenum SW]
gi|209957842|gb|ACI98478.1| single-strand DNA binding protein, putative [Rhodospirillum
centenum SW]
Length = 188
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +++G V + T +R E + T QWH
Sbjct: 5 VNKVILIGNLGKDPEIRNMQNGGKVCNLRIATSENWKDRNTGERQERT--------QWHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E L + ++L GS +Y+EG LE + + D +G + E+ +R+
Sbjct: 57 VVIFNENLAQIAERYLRKGSKVYIEGQLETRKWTDQ-SGQEKYTTEVVLRQ 106
>gi|161831024|ref|YP_001596218.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 331]
gi|161762891|gb|ABX78533.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 331]
Length = 158
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + +G V +L T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R++ + RL +V ++L GS IY+EG+L + + D G+ R EI
Sbjct: 56 RIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 101
>gi|381406032|ref|ZP_09930716.1| single-stranded DNA-binding protein [Pantoea sp. Sc1]
gi|380739231|gb|EIC00295.1| single-stranded DNA-binding protein [Pantoea sp. Sc1]
Length = 180
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQML 113
>gi|295689345|ref|YP_003593038.1| single-strand binding protein [Caulobacter segnis ATCC 21756]
gi|295431248|gb|ADG10420.1| single-strand binding protein [Caulobacter segnis ATCC 21756]
Length = 191
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ + L V ++L GST+Y+EG L+ + + D
Sbjct: 57 VVIFNDNLVKVAEQYLKKGSTVYIEGALQTRKWTD 91
>gi|322834752|ref|YP_004214779.1| single-strand binding protein [Rahnella sp. Y9602]
gi|384259972|ref|YP_005403906.1| single-strand binding protein [Rahnella aquatilis HX2]
gi|321169953|gb|ADW75652.1| single-strand binding protein [Rahnella sp. Y9602]
gi|380755948|gb|AFE60339.1| single-strand binding protein [Rahnella aquatilis HX2]
Length = 180
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|217038311|gb|ACJ76607.1| sjogren syndrome antigen B (predicted) [Oryctolagus cuniculus]
Length = 148
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R +NE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGDNETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFQPGLRDVAYQYVKKGSRIYVEGKVDYGEYMD 121
>gi|431911644|gb|ELK13792.1| Wee1-like protein kinase 2 [Pteropus alecto]
Length = 701
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + + ENE
Sbjct: 565 LERSLNRVQLLGRVGQDPVMRQIEGKNPVTIFSLATNEMWKSG---ENEAYQMGDVSQKT 621
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 622 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 660
>gi|410085169|ref|ZP_11281889.1| Single-stranded DNA-binding protein [Morganella morganii SC01]
gi|409768378|gb|EKN52440.1| Single-stranded DNA-binding protein [Morganella morganii SC01]
Length = 172
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG+L+ + + D +G R E+ + G+ +
Sbjct: 57 RVVIFG-KLAEIAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQERYTTEVVVNIGGSMQML 113
>gi|410652456|ref|YP_006955738.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|410654228|ref|YP_006957806.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|425221460|ref|ZP_18616377.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|432725481|ref|ZP_19960390.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE17]
gi|432969395|ref|ZP_20158304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE203]
gi|365819286|gb|AEX01075.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|407809955|gb|AFU34764.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|408155920|gb|EKH84160.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|431261448|gb|ELF53484.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE17]
gi|431467430|gb|ELH47439.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE203]
Length = 175
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLCKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQML 112
>gi|395779791|ref|ZP_10460260.1| single-strand binding protein [Bartonella washoensis 085-0475]
gi|395420166|gb|EJF86451.1| single-strand binding protein [Bartonella washoensis 085-0475]
Length = 172
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQK 106
>gi|422908931|ref|ZP_16943586.1| single-stranded DNA-binding protein [Vibrio cholerae HE-09]
gi|424658290|ref|ZP_18095547.1| single-stranded DNA-binding protein [Vibrio cholerae HE-16]
gi|341636423|gb|EGS61119.1| single-stranded DNA-binding protein [Vibrio cholerae HE-09]
gi|408055295|gb|EKG90229.1| single-stranded DNA-binding protein [Vibrio cholerae HE-16]
Length = 177
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV++Y +L V ++L GS +Y+EG L+ + + D
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQD 91
>gi|1890239|emb|CAA58648.1| mitochondrial single strand DNA binding protein [Xenopus laevis]
Length = 148
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENE--NPTEYANRC 134
L+ + K L+G+VGQ PV ++ VT+FSL T + R ENE P N+
Sbjct: 26 LERSMNKVQLLGRVGQDPVMRQADGKNPVTIFSLATNELW---RSGENEVFQPAGDVNQ- 81
Query: 135 AVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHRVSV+ L V +H+ G+ + VEG ++ + D
Sbjct: 82 KTTWHRVSVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTD 122
>gi|417241971|ref|ZP_12037633.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 9.0111]
gi|417665165|ref|ZP_12314737.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_O31]
gi|386211829|gb|EII22281.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 9.0111]
gi|397787258|gb|EJK98084.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_O31]
Length = 173
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|383191946|ref|YP_005202074.1| single stranded DNA-binding protein [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371590204|gb|AEX53934.1| single stranded DNA-binding protein [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 180
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|262164151|ref|ZP_06031890.1| single-stranded DNA-binding protein [Vibrio mimicus VM223]
gi|262172511|ref|ZP_06040189.1| single-stranded DNA-binding protein [Vibrio mimicus MB-451]
gi|261893587|gb|EEY39573.1| single-stranded DNA-binding protein [Vibrio mimicus MB-451]
gi|262027679|gb|EEY46345.1| single-stranded DNA-binding protein [Vibrio mimicus VM223]
Length = 177
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV++Y +L V ++L GS +Y+EG L+ + + D
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQD 91
>gi|420688955|ref|ZP_15172556.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-52]
gi|391576800|gb|EIS23304.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-52]
Length = 167
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|258626996|ref|ZP_05721794.1| single-strand binding protein [Vibrio mimicus VM603]
gi|449143839|ref|ZP_21774660.1| ssDNA-binding protein [Vibrio mimicus CAIM 602]
gi|258580670|gb|EEW05621.1| single-strand binding protein [Vibrio mimicus VM603]
gi|449080494|gb|EMB51407.1| ssDNA-binding protein [Vibrio mimicus CAIM 602]
Length = 177
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV++Y +L V ++L GS +Y+EG L+ + + D
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQD 91
>gi|331660280|ref|ZP_08361215.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA206]
gi|331052547|gb|EGI24583.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA206]
Length = 176
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKTTGTMQML 113
>gi|292489759|ref|YP_003532649.1| single-stranded DNA-binding protein [Erwinia amylovora CFBP1430]
gi|292898035|ref|YP_003537404.1| single-strand binding protein [Erwinia amylovora ATCC 49946]
gi|428786734|ref|ZP_19004212.1| Single-stranded DNA-binding protein [Erwinia amylovora ACW56400]
gi|291197883|emb|CBJ44983.1| single-strand binding protein [Erwinia amylovora ATCC 49946]
gi|291555196|emb|CBA23421.1| Single-stranded DNA-binding protein [Erwinia amylovora CFBP1430]
gi|426275003|gb|EKV52743.1| Single-stranded DNA-binding protein [Erwinia amylovora ACW56400]
Length = 183
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|78186149|ref|YP_374192.1| single-strand binding protein [Chlorobium luteolum DSM 273]
gi|78166051|gb|ABB23149.1| single-strand binding protein [Chlorobium luteolum DSM 273]
Length = 163
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +G P + + SG+TV F+L T E+ + A + +WH
Sbjct: 4 GLNKVMLIGNLGNDPELRTIPSGQTVANFTLATS---------ESFKDSSGAMQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R+ + RL + ++L G +YVEG ++ + ++D TG + +I +
Sbjct: 55 RIVAW-GRLAEICGQYLKKGRQVYVEGRIQTRSWDDQKTGEKKYATDIVV 103
>gi|378581874|ref|ZP_09830514.1| Single-stranded DNA-binding protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815189|gb|EHT98304.1| Single-stranded DNA-binding protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 180
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQML 113
>gi|346992455|ref|ZP_08860527.1| single-strand binding protein [Ruegeria sp. TW15]
Length = 161
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ E L V ++L GS IYVEG L+ + + D +G R E+ ++ G+ L+
Sbjct: 57 VAIFNEGLVRVAEQYLRKGSKIYVEGQLQTRKWQDQ-SGQDRYSTEVVLQGFGSTLVML 114
>gi|147903988|ref|NP_001091326.1| single-stranded DNA-binding protein 1-B, mitochondrial [Xenopus
laevis]
gi|224471904|sp|P09381.4|SSBPB_XENLA RecName: Full=Single-stranded DNA-binding protein 1-B,
mitochondrial; AltName: Full=Single-stranded DNA-binding
protein 2, mitochondrial; Short=MtSSB-2; Short=XlSSB2;
AltName: Full=Single-stranded DNA-binding protein R,
mitochondrial; Short=MtSSBr; Flags: Precursor
gi|124481772|gb|AAI33266.1| Ssbp1-b protein [Xenopus laevis]
Length = 148
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENE--NPTEYANRC 134
L+ + K L+G+VGQ PV ++ VT+FSL T + R ENE P N+
Sbjct: 26 LERSMNKVQLLGRVGQDPVMRQADGKNPVTIFSLATNELW---RSGENEVFQPAGDVNQ- 81
Query: 135 AVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHRVSV+ L V +H+ G+ + VEG ++ + D
Sbjct: 82 KTTWHRVSVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTD 122
>gi|395782511|ref|ZP_10462898.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
gi|395418006|gb|EJF84342.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
Length = 147
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G +P K + SG V F + T ++ + + TE WH +
Sbjct: 4 KVILIGHLGANPESKTMSSGAEVVNFRIATFESYTDKAANKKIDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ +
Sbjct: 56 VFNPHLAKIALQYLNKGSKVYIEGQLQTRKWQDK-NGIERFVTEVIL 101
>gi|345870374|ref|ZP_08822327.1| single-strand binding protein [Thiorhodococcus drewsii AZ1]
gi|343921946|gb|EGV32655.1| single-strand binding protein [Thiorhodococcus drewsii AZ1]
Length = 154
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +L+G +G P + L SG +V SL T ++ E TE WH
Sbjct: 4 GINKVLLIGNLGTDPEVRVLPSGDSVANLSLATSETWTDKPSGETRERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
R+ ++ RL + ++L GS +YVEG L + + G R E+ I GT L+
Sbjct: 56 RIVIF-GRLAEIAGQYLHSGSRVYVEGKLRTRQYQAQ-DGSERSTTEVVIDAGGTLLML 112
>gi|312964215|ref|ZP_07778527.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|419287261|ref|ZP_13829409.1| ssDNA-binding protein [Escherichia coli DEC10F]
gi|312291043|gb|EFR18916.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|378122766|gb|EHW84193.1| ssDNA-binding protein [Escherichia coli DEC10F]
Length = 162
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|301629821|ref|XP_002944032.1| PREDICTED: single-stranded DNA-binding protein-like [Xenopus
(Silurana) tropicalis]
Length = 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 INKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ RL +V ++L GS +YVEG+L + + D
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTD 89
>gi|251788330|ref|YP_003003051.1| single-strand binding protein [Dickeya zeae Ech1591]
gi|247536951|gb|ACT05572.1| single-strand binding protein [Dickeya zeae Ech1591]
Length = 182
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV++Y +L + ++L GS +Y+EG L + + D G R E+ + +G+ +
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVVDISGSMQML 113
>gi|227553|prf||1706408A ssDNA binding protein
Length = 174
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 4 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 56 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 111
>gi|395781649|ref|ZP_10462067.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
gi|395421082|gb|EJF87340.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
Length = 148
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G P K + SG + F + T +++ + + TE WH +
Sbjct: 4 KVMLIGYLGDDPESKTMTSGVEIVNFRMATSESYTDKKTNQKIDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V+ L + +++L GS +Y+EG L+ + + D G R EI + +
Sbjct: 56 VFNPHLAKIALQYLSKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQ 103
>gi|238754669|ref|ZP_04616022.1| Single-stranded DNA-binding protein [Yersinia ruckeri ATCC 29473]
gi|238707128|gb|EEP99492.1| Single-stranded DNA-binding protein [Yersinia ruckeri ATCC 29473]
Length = 183
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|345297479|ref|YP_004826837.1| single-strand binding protein [Enterobacter asburiae LF7a]
gi|345091416|gb|AEN63052.1| single-strand binding protein [Enterobacter asburiae LF7a]
Length = 174
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGAEKYTTEIVVNVGGTMQML 113
>gi|395787563|ref|ZP_10467162.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
gi|395411078|gb|EJF77613.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
Length = 172
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQK 106
>gi|283826866|ref|YP_003377737.1| single-stranded DNA-binding protein [Shigella sonnei]
gi|283466758|emb|CBI12425.1| single-stranded DNA-binding protein [Shigella sonnei]
Length = 186
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|126723247|ref|NP_001075600.1| single-stranded DNA-binding protein, mitochondrial precursor
[Oryctolagus cuniculus]
gi|75054474|sp|Q95KK4.1|SSBP_RABIT RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Short=Mt-SSB; Short=MtSSB; Flags: Precursor
gi|13992542|emb|CAC38115.1| single-stranded DNA binding [Oryctolagus cuniculus]
Length = 148
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R +NE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGDNETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYMD 121
>gi|319408860|emb|CBI82517.1| Single-stranded DNA-binding protein [Bartonella schoenbuchensis R1]
Length = 144
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G +P K + SG V F + T ++ E TE WH
Sbjct: 2 INKVILVGNLGANPESKTMASGTEVVNFRIATSQSYKDKTTGEKVEKTE--------WHS 53
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+ V+ L V +++L GS +YVEG L+ + + D
Sbjct: 54 IVVFNPHLVKVALQYLSKGSKVYVEGQLQTRKWQD 88
>gi|168759021|ref|ZP_02784028.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4401]
gi|168770718|ref|ZP_02795725.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4486]
gi|422335326|ref|ZP_16416326.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
gi|424572667|ref|ZP_18013164.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|425414295|ref|ZP_18796016.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|189354294|gb|EDU72713.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4401]
gi|189360447|gb|EDU78866.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4486]
gi|373243664|gb|EHP63165.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
gi|390889838|gb|EIP49544.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|408351898|gb|EKJ65582.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
Length = 175
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQML 112
>gi|356582469|ref|NP_001239208.1| single-stranded DNA-binding protein, mitochondrial [Canis lupus
familiaris]
gi|359321657|ref|XP_003639657.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Canis lupus familiaris]
Length = 148
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R E+E
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGESETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|260751953|ref|YP_003232491.1| putative Ssb protein [Escherichia coli O26:H11 str. 11368]
gi|257757316|dbj|BAI28816.1| putative Ssb protein [Escherichia coli O26:H11 str. 11368]
Length = 182
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKNTGTMQML 113
>gi|167949714|ref|ZP_02536788.1| Single-strand binding protein [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|345862683|ref|ZP_08814897.1| single-stranded DNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345126025|gb|EGW55891.1| single-stranded DNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 148
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + + SG VT ++ T ++ E + TE WH
Sbjct: 4 GINKVILIGNLGRDPETRYMPSGGAVTNVTVATSDSWKDKNTGEQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV V+ RL + ++L GS +YVEG L+ + +
Sbjct: 56 RV-VFFNRLAEIAAEYLKKGSKVYVEGRLQTRKW 88
>gi|194446891|ref|YP_002038934.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|218534521|ref|YP_002401051.1| single-stranded DNA-binding protein [Escherichia coli S88]
gi|237702649|ref|ZP_04533130.1| single-stranded DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|419943469|ref|ZP_14460020.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|422752443|ref|ZP_16806344.1| single-strand binding protein [Escherichia coli H252]
gi|432362212|ref|ZP_19605392.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE5]
gi|432383078|ref|ZP_19626012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE15]
gi|432406393|ref|ZP_19649109.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|432406536|ref|ZP_19649249.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|432421301|ref|ZP_19663855.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE178]
gi|432597152|ref|ZP_19833431.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE62]
gi|432757778|ref|ZP_19992311.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE22]
gi|432780898|ref|ZP_20015116.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE59]
gi|432787142|ref|ZP_20021279.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE65]
gi|432828081|ref|ZP_20061729.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|433012137|ref|ZP_20200533.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE229]
gi|433166676|ref|ZP_20351373.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE179]
gi|194358643|gb|ACF57086.1| plasmid-derived single-stranded DNA-binding protein [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|218349725|emb|CAQ87118.1| Single-stranded DNA-binding protein [Escherichia coli S88]
gi|226903235|gb|EEH89494.1| single-stranded DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|323948858|gb|EGB44754.1| single-strand binding protein [Escherichia coli H252]
gi|388420977|gb|EIL80615.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|430888472|gb|ELC11189.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE5]
gi|430905089|gb|ELC26766.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE15]
gi|430930882|gb|ELC51369.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|430931035|gb|ELC51505.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|430946415|gb|ELC66344.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE178]
gi|431132250|gb|ELE34264.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE62]
gi|431297463|gb|ELF87116.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE22]
gi|431324005|gb|ELG11462.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE59]
gi|431339540|gb|ELG26600.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE65]
gi|431371314|gb|ELG57098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|431515765|gb|ELH93581.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE229]
gi|431680408|gb|ELJ46240.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE179]
Length = 210
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|158520061|ref|YP_001527931.1| single-strand binding protein [Desulfococcus oleovorans Hxd3]
gi|158508887|gb|ABW65854.1| single-strand binding protein [Desulfococcus oleovorans Hxd3]
Length = 137
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ KAI+VG++G+ P + + GR V FS+ T ++ + + TE WH
Sbjct: 3 GVNKAIIVGRLGRDPELRYTQDGRAVASFSVATSEEWKDKDSGDKKERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + RLG + ++L G +YV+G L+ + + G+ R EI
Sbjct: 55 RVVAFG-RLGEICGEYLAKGRLVYVDGRLQTRSWEK--DGVTRYTTEI 99
>gi|395790925|ref|ZP_10470384.1| single-strand binding protein [Bartonella alsatica IBS 382]
gi|395409221|gb|EJF75820.1| single-strand binding protein [Bartonella alsatica IBS 382]
Length = 172
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L V ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKVAEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|410653202|ref|YP_006956490.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|410653804|ref|YP_006957092.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|417136945|ref|ZP_11980826.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0259]
gi|381288334|gb|AFG21226.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|381288498|gb|AFG21389.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|386159422|gb|EIH15751.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0259]
Length = 150
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|432965041|ref|ZP_20153967.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
gi|431477670|gb|ELH57433.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
Length = 162
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|395765180|ref|ZP_10445796.1| single-strand binding protein [Bartonella sp. DB5-6]
gi|395413033|gb|EJF79512.1| single-strand binding protein [Bartonella sp. DB5-6]
Length = 146
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV---QWH 139
K IL+G +G +P +K + SG V F + T E+ T+ A V +WH
Sbjct: 4 KVILIGHLGTNPERKTMTSGGEVVNFRMAT-----------TESYTDKATNKKVDKTEWH 52
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ +
Sbjct: 53 SIVVFNPHLAKIALQYLNKGSKVYIEGRLQTRKWQDK-NGVERYVTEVIL 101
>gi|419373337|ref|ZP_13914412.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC14B]
gi|378229275|gb|EHX89417.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC14B]
Length = 207
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|254418848|ref|ZP_05032572.1| single-strand binding protein [Brevundimonas sp. BAL3]
gi|196185025|gb|EDX80001.1| single-strand binding protein [Brevundimonas sp. BAL3]
Length = 167
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + +G + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRSMPNGDRIANLSIATSETWRDKSSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ + + VV ++ GST+Y+EG L+ + + D G+ + EI + R
Sbjct: 57 VVIFNDNIVKVVENYVKKGSTVYIEGALQTRKWTDQ-QGVEKYSTEIVVSR 106
>gi|384918031|ref|ZP_10018129.1| single stranded DNA-binding protein [Citreicella sp. 357]
gi|384468144|gb|EIE52591.1| single stranded DNA-binding protein [Citreicella sp. 357]
Length = 175
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGADPEVRSFQNGGKVCNLRIATSESWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L + ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGADRYSTEVVLR 105
>gi|451812547|ref|YP_007449001.1| single-strand DNA-binding protein [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451778449|gb|AGF49397.1| single-strand DNA-binding protein [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 149
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + G T+ S+ T +R E + TE WHR
Sbjct: 4 VNKVILLGNLGRDPELRYTPEGSTICNLSIATTSQWKDRNSGERKEETE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
V +Y RL + + L G IY+EG L+ + + D TG R I EI
Sbjct: 56 VVLY-NRLAEIAGEFLKKGKPIYLEGRLKTRKWQDKDTGSDRYITEIV 102
>gi|188574258|ref|YP_001919398.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 53638]
gi|410469286|ref|YP_006902955.1| single stranded DNA-binding protein [Escherichia coli]
gi|415799012|ref|ZP_11498625.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E128010]
gi|450202259|ref|ZP_21893391.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|188501433|gb|ACD54567.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 53638]
gi|323161451|gb|EFZ47353.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E128010]
gi|371781269|emb|CCA64292.1| single stranded DNA-binding protein [Escherichia coli]
gi|449312476|gb|EMD02736.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 175
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|281353973|gb|EFB29557.1| hypothetical protein PANDA_010639 [Ailuropoda melanoleuca]
Length = 106
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 86 LVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYP 145
L+G+VGQ PV ++++ VT+FSL T + R ENE WHR+SV+
Sbjct: 7 LLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENEAYQMGDVSQKTTWHRISVFR 63
Query: 146 ERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
L V +++ GS IYVEG ++ + D
Sbjct: 64 PGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 93
>gi|374331569|ref|YP_005081753.1| ssDNA-binding protein [Pseudovibrio sp. FO-BEG1]
gi|359344357|gb|AEV37731.1| Single-strand DNA-binding protein [Pseudovibrio sp. FO-BEG1]
Length = 181
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + + T +R E TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIVNLRIATSESWRDRNSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ E L V ++L GS +Y+EG L+ + + D
Sbjct: 57 VVVFNEGLAKVAEQYLRKGSKVYIEGQLQTRKWQD 91
>gi|307132498|ref|YP_003884514.1| ssDNA-binding protein [Dickeya dadantii 3937]
gi|306530027|gb|ADM99957.1| Single-stranded DNA-binding protein [Dickeya dadantii 3937]
Length = 181
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV++Y +L + ++L GS +Y+EG L + + D G R E+ + +G+ +
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVVDISGSMQML 113
>gi|301648528|ref|ZP_07248251.1| single-strand binding family protein, partial [Escherichia coli MS
146-1]
gi|301073410|gb|EFK88216.1| single-strand binding family protein [Escherichia coli MS 146-1]
Length = 197
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 23 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 74
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 75 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 130
>gi|254469361|ref|ZP_05082766.1| single-strand DNA-binding protein [Pseudovibrio sp. JE062]
gi|211961196|gb|EEA96391.1| single-strand DNA-binding protein [Pseudovibrio sp. JE062]
Length = 182
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + + T +R E TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIVNLRIATSESWRDRNSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ E L V ++L GS +Y+EG L+ + + D
Sbjct: 57 VVVFNEGLAKVAEQYLRKGSKVYIEGQLQTRKWQD 91
>gi|159044155|ref|YP_001532949.1| single stranded DNA-binding protein [Dinoroseobacter shibae DFL 12]
gi|157911915|gb|ABV93348.1| single stranded DNA-binding protein [Dinoroseobacter shibae DFL 12]
Length = 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGERREKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARVAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|397166059|ref|ZP_10489505.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
gi|396092221|gb|EJI89785.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
Length = 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|359407575|ref|ZP_09200052.1| single stranded DNA-binding protein [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356677614|gb|EHI49958.1| single stranded DNA-binding protein [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 165
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + + G + ++ T +R E TE WHR
Sbjct: 5 VNKVILLGNLGRDPEVRSTQDGTKIVNLNIATSERWKDRNSGEQRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E L + ++L GST+Y+EG L+ + + D G+ + E+ ++R
Sbjct: 57 VVIFNENLARIAEQYLRKGSTVYLEGQLQTRKWTDQ-QGVEKYTTEVVLQR 106
>gi|424810490|ref|ZP_18235842.1| single strand DNA-binding protein; SSB [Vibrio mimicus SX-4]
gi|342322421|gb|EGU18212.1| single strand DNA-binding protein; SSB [Vibrio mimicus SX-4]
Length = 183
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 11 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 62
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV++Y +L V ++L GS +Y+EG L+ + + D
Sbjct: 63 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQD 97
>gi|407892533|ref|ZP_11151563.1| single-strand DNA-binding protein [Diplorickettsia massiliensis
20B]
Length = 156
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + + +G V ++ T +++ E + TE WH
Sbjct: 4 GINKVILIGNLGADPEVRHMPNGSAVATLNIATSEGWKDKQTGEQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV ++ +RL + ++L GS +Y+EG L+ + + D TG R EI
Sbjct: 56 RVVLF-QRLAEIAGEYLKKGSKVYIEGRLQTRKWQDK-TGQDRFTTEI 101
>gi|418020609|ref|ZP_12659852.1| single stranded DNA-binding protein (ssb) [Candidatus Regiella
insecticola R5.15]
gi|347604050|gb|EGY28773.1| single stranded DNA-binding protein (ssb) [Candidatus Regiella
insecticola R5.15]
Length = 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RV +Y +L V ++L GS +Y+EG L+ + + D +G R E+ + G
Sbjct: 57 RVVLYG-KLAEVAGEYLRKGSQVYIEGTLQTRKWQDQ-SGQDRYTTEVVVNVGG 108
>gi|294852443|ref|ZP_06793116.1| single-stranded DNA-binding protein [Brucella sp. NVSL 07-0026]
gi|294821032|gb|EFG38031.1| single-stranded DNA-binding protein [Brucella sp. NVSL 07-0026]
Length = 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENFAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|424862741|ref|ZP_18286654.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86A]
gi|400757362|gb|EJP71573.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86A]
Length = 145
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ EN + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQTAVANLSIATTESWKDKESGENRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ L + K+L GS++YVEG ++ + + D
Sbjct: 56 RV-VFFGNLAEIAEKYLDKGSSVYVEGKIQTRKWQD 90
>gi|408785269|ref|ZP_11197016.1| single-stranded DNA-binding protein [Rhizobium lupini HPC(L)]
gi|424910297|ref|ZP_18333674.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392846328|gb|EJA98850.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408488863|gb|EKJ97170.1| single-stranded DNA-binding protein [Rhizobium lupini HPC(L)]
Length = 178
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 105
>gi|219857031|ref|YP_002474063.1| single-strand DNA (ssDNA) binding protein [Pseudomonas putida]
gi|414085887|ref|YP_002154413.1| single-strand DNA (ssDNA) binding protein [Pseudomonas
resinovorans]
gi|171363644|dbj|BAG15889.1| single-strand DNA (ssDNA) binding protein [Pseudomonas
resinovorans]
gi|219688959|dbj|BAH10050.1| single-strand DNA (ssDNA) binding protein [Pseudomonas putida]
Length = 170
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQG 106
>gi|417225622|ref|ZP_12028791.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.154]
gi|386198538|gb|EIH97530.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.154]
Length = 195
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|423116333|ref|ZP_17104024.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
gi|376378515|gb|EHS91274.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
Length = 178
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYIPNGSAVATLSLATSESWRDKQSGEQKEVTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG L + + D G + E+ + GT +
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLRTRKWTDQ-AGQDKYTTEVVVNIGGTMQML 113
>gi|410691812|ref|YP_006970928.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|410691941|ref|YP_006971056.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|301130358|gb|ADK62159.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|301130486|gb|ADK62286.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
Length = 287
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 82 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 133
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 134 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 189
>gi|163760270|ref|ZP_02167353.1| single-strand DNA-binding protein [Hoeflea phototrophica DFL-43]
gi|162282669|gb|EDQ32957.1| single-strand DNA-binding protein [Hoeflea phototrophica DFL-43]
Length = 172
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + S+ T ++ E TE WHR
Sbjct: 5 VNKVILIGNLGADPDIKRTQDGRPIANLSIATSESWRDKNSGERREKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + +L GS +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKIAESYLKKGSKVYIEGALQTRKWTD 91
>gi|114564862|ref|YP_752376.1| single-strand binding protein [Shewanella frigidimarina NCIMB 400]
gi|1490785|gb|AAB57887.1| single stranded DNA-binding protein [Shewanella sp. SC2A]
gi|114336155|gb|ABI73537.1| single-strand binding protein [Shewanella frigidimarina NCIMB 400]
Length = 242
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTIATSESWKDQQGQMQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL + ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKVYLEGKLQTSKWQDQTTGQDRYKTEI 102
>gi|417147758|ref|ZP_11988258.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2264]
gi|386162323|gb|EIH24123.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2264]
Length = 173
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|333929366|ref|YP_004502945.1| single-strand binding protein [Serratia sp. AS12]
gi|333934319|ref|YP_004507897.1| single-strand binding protein [Serratia plymuthica AS9]
gi|386331189|ref|YP_006027359.1| single-strand binding protein [Serratia sp. AS13]
gi|386823326|ref|ZP_10110477.1| single-strand binding protein [Serratia plymuthica PRI-2C]
gi|421785812|ref|ZP_16222235.1| single-stranded DNA-binding protein [Serratia plymuthica A30]
gi|333475926|gb|AEF47636.1| single-strand binding protein [Serratia plymuthica AS9]
gi|333493426|gb|AEF52588.1| single-strand binding protein [Serratia sp. AS12]
gi|333963522|gb|AEG30295.1| single-strand binding protein [Serratia sp. AS13]
gi|386379786|gb|EIJ20572.1| single-strand binding protein [Serratia plymuthica PRI-2C]
gi|407752001|gb|EKF62161.1| single-stranded DNA-binding protein [Serratia plymuthica A30]
Length = 178
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|345875109|ref|ZP_08826905.1| hypothetical protein l11_09890 [Neisseria weaveri LMG 5135]
gi|417958194|ref|ZP_12601110.1| hypothetical protein l13_15220 [Neisseria weaveri ATCC 51223]
gi|343967256|gb|EGV35505.1| hypothetical protein l13_15220 [Neisseria weaveri ATCC 51223]
gi|343969536|gb|EGV37748.1| hypothetical protein l11_09890 [Neisseria weaveri LMG 5135]
Length = 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + + +G V FS+ T + N+R + + TE WH ++
Sbjct: 6 KVILIGNLGRDPEIRYMPNGEAVCNFSIATSEVWNDRNSGQRQERTE--------WHNIT 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
+Y RL V ++L GS++Y+EG ++ + +
Sbjct: 58 LY-RRLAEVAGQYLRKGSSVYIEGRIQSRKY 87
>gi|334123068|ref|ZP_08497098.1| single-stranded DNA-binding protein [Enterobacter hormaechei ATCC
49162]
gi|333391184|gb|EGK62304.1| single-stranded DNA-binding protein [Enterobacter hormaechei ATCC
49162]
Length = 165
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYLPSGGAVCSVTLATSESWRDKATGELKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|258623351|ref|ZP_05718355.1| single-strand binding protein [Vibrio mimicus VM573]
gi|258584317|gb|EEW09062.1| single-strand binding protein [Vibrio mimicus VM573]
Length = 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV++Y +L V ++L GS +Y+EG L+ + + D
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQD 91
>gi|254284222|ref|ZP_04959190.1| single-strand binding protein [gamma proteobacterium NOR51-B]
gi|219680425|gb|EED36774.1| single-strand binding protein [gamma proteobacterium NOR51-B]
Length = 156
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +G P + L SG VT S+ T +++ + + TE WH
Sbjct: 5 GVNKVIIVGNLGNDPEHRMLPSGGAVTNISVATSESWKDKQTGQPQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ RL + ++L GS +Y+EG+L + + D
Sbjct: 57 RV-VFFNRLAEIAAEYLRKGSKVYLEGSLRTRKWQD 91
>gi|119358075|ref|YP_912719.1| single-strand binding protein [Chlorobium phaeobacteroides DSM 266]
gi|119355424|gb|ABL66295.1| single-strand binding protein [Chlorobium phaeobacteroides DSM 266]
Length = 171
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
+ G+ K +L+G +G P + SG+TVT F+L T + E
Sbjct: 1 MAKGLNKVMLIGHLGGDPESRNTASGQTVTNFTLATTESFKDATGTWQEK---------T 51
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+WHR+ + +L + ++L G +YVEG L+ + ++D +G + EI
Sbjct: 52 EWHRIVTWG-KLAEICSQYLKKGRQVYVEGRLQTRSWDDQKSGEKKYTTEIVC 103
>gi|406898943|gb|EKD42357.1| hypothetical protein ACD_73C00191G0002 [uncultured bacterium]
Length = 149
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +GQ P + + G+ + ++ T NN++ + E TE WHR
Sbjct: 4 VNKVILVGNLGQDPEVRYTQGGQCICTLNIATNEKWNNKQTGQPEERTE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ +LG + +L G + YVEG L+ + + D
Sbjct: 56 VVVWG-KLGELCRDYLAKGRSAYVEGRLQTRKWED 89
>gi|417129931|ref|ZP_11975738.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.0588]
gi|386154270|gb|EIH05540.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.0588]
Length = 173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|422831445|ref|ZP_16879589.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|371601773|gb|EHN90496.1| single-stranded DNA-binding protein [Escherichia coli B093]
Length = 161
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ+P + + G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGNLGQNPDIRYMPDGGAVANIALATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D TG R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYIEGQLRTRKWTDQ-TGQERYTTEVVVHTGGTMQML 113
>gi|418296294|ref|ZP_12908138.1| single-stranded DNA-binding protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539726|gb|EHH08964.1| single-stranded DNA-binding protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 194
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 19 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 70
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 71 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 119
>gi|262401517|ref|ZP_06078084.1| single-stranded DNA-binding protein [Vibrio sp. RC586]
gi|262352232|gb|EEZ01361.1| single-stranded DNA-binding protein [Vibrio sp. RC586]
Length = 177
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV++Y +L V ++L GS +Y+EG L+ + + D
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQD 91
>gi|114570434|ref|YP_757114.1| single-strand binding protein [Maricaulis maris MCS10]
gi|114340896|gb|ABI66176.1| single-strand binding protein [Maricaulis maris MCS10]
Length = 164
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P +++ +G V S+ T ++ E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRRMNNGDPVVNLSVATSESWRDKSSGERREKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ + L V +L GS +YVEG L+ + + D G + E+ ++R
Sbjct: 57 VVIFNDNLAKVAENYLKKGSKVYVEGQLQTRKWTDQ-NGQEKYSTEVVLQR 106
>gi|421494440|ref|ZP_15941788.1| SSB [Morganella morganii subsp. morganii KT]
gi|455737896|ref|YP_007504162.1| Single-stranded DNA-binding protein [Morganella morganii subsp.
morganii KT]
gi|400191302|gb|EJO24450.1| SSB [Morganella morganii subsp. morganii KT]
gi|455419459|gb|AGG29789.1| Single-stranded DNA-binding protein [Morganella morganii subsp.
morganii KT]
Length = 173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG+L+ + + D +G R E+ + G+ +
Sbjct: 57 RVVIFG-KLAEIAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQERYTTEVVVNIGGSMQML 113
>gi|395767184|ref|ZP_10447719.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
gi|395414497|gb|EJF80939.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
Length = 172
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEVRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L V ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKVAEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|312173939|emb|CBX82193.1| Single-stranded DNA-binding protein [Erwinia amylovora ATCC
BAA-2158]
Length = 180
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|294142497|ref|YP_003558475.1| single-strand binding protein [Shewanella violacea DSS12]
gi|293328966|dbj|BAJ03697.1| single-strand binding protein [Shewanella violacea DSS12]
Length = 228
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL V ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEVAGEYLKKGSKVYIEGKLQTSKWQDQSTGQDRYKTEI 102
>gi|212213221|ref|YP_002304157.1| single-strand DNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212011631|gb|ACJ19012.1| single-strand DNA binding protein [Coxiella burnetii CbuG_Q212]
Length = 158
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + +G V +L T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R++ + RL +V ++L GS IY+EG+L + + D G+ R EI
Sbjct: 56 RIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 101
>gi|456355565|dbj|BAM90010.1| single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Agromonas oligotrophica S58]
Length = 164
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|189183638|ref|YP_001937423.1| single-strand binding protein [Orientia tsutsugamushi str. Ikeda]
gi|189180409|dbj|BAG40189.1| single-strand binding protein [Orientia tsutsugamushi str. Ikeda]
Length = 155
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
+ L+G +G P +K G+ + FSL T ++ E + TE WHR+
Sbjct: 7 RVTLIGNLGHDPEIRKTNDGKEIAAFSLATTETWRDKHSNEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+ + + ++ ++ GS + +EG+L+ + + D +G + EI ++ LI
Sbjct: 59 VFNDGIVNIIKSYVKKGSKVLIEGSLQTRKWQDS-SGQEKYTTEIVLQNYNASLILL 114
>gi|161617492|ref|YP_001591457.1| hypothetical protein SPAB_05351 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366856|gb|ABX70624.1| hypothetical protein SPAB_05351 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 183
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K ILVG +GQ P + + S VT FS+ T +++ + + TE W
Sbjct: 5 GINKVILVGHLGQDPEVRYIPNSSTAVTGFSIATSESWRDKQSGDMKEKTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
HRV ++ +L + ++L GS +Y+EG L + + D G+ R E+ + NGT
Sbjct: 57 HRVVLFG-KLAEIAGEYLKKGSQVYIEGQLRTRKWTDD-GGVERWTTEVVVGVNGT 110
>gi|395789458|ref|ZP_10468978.1| single-stranded DNA-binding protein [Bartonella taylorii 8TBB]
gi|395430001|gb|EJF96053.1| single-stranded DNA-binding protein [Bartonella taylorii 8TBB]
Length = 172
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQK 106
>gi|424870625|ref|ZP_18294287.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393166326|gb|EJC66373.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|378962346|ref|YP_005219832.1| ssDNA-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|374356218|gb|AEZ47979.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 176
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +R+ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDRQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIGGVM 111
>gi|241204652|ref|YP_002975748.1| single-stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858542|gb|ACS56209.1| single-strand binding protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 169
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|116252151|ref|YP_767989.1| single-stranded DNA-binding protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256799|emb|CAK07889.1| putative single-strand binding protein (ssb) [Rhizobium
leguminosarum bv. viciae 3841]
Length = 169
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|395765218|ref|ZP_10445834.1| single-strand binding protein [Bartonella sp. DB5-6]
gi|395413071|gb|EJF79550.1| single-strand binding protein [Bartonella sp. DB5-6]
Length = 172
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQK 106
>gi|432804197|ref|ZP_20038144.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE91]
gi|432921767|ref|ZP_20124852.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE173]
gi|432926003|ref|ZP_20127891.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE175]
gi|432930533|ref|ZP_20131017.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE184]
gi|433171727|ref|ZP_20356303.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE180]
gi|433193039|ref|ZP_20377049.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE90]
gi|431358096|gb|ELG44755.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE91]
gi|431437589|gb|ELH19098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE173]
gi|431447569|gb|ELH28299.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE175]
gi|431461954|gb|ELH42220.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE184]
gi|431680184|gb|ELJ46051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE180]
gi|431719511|gb|ELJ83566.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE90]
Length = 179
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|86357727|ref|YP_469619.1| single-stranded DNA-binding protein [Rhizobium etli CFN 42]
gi|86281829|gb|ABC90892.1| single-strand DNA binding protein [Rhizobium etli CFN 42]
Length = 171
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ E L VV +++ G+ +YVEG L+ + + D
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYVEGQLQTRKWQD 91
>gi|420830417|ref|ZP_15297307.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-99]
gi|391715546|gb|EIT46073.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-99]
Length = 163
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|387890917|ref|YP_006321215.1| single-strand binding protein [Escherichia blattae DSM 4481]
gi|414595775|ref|ZP_11445386.1| single-stranded DNA-binding protein [Escherichia blattae NBRC
105725]
gi|386925750|gb|AFJ48704.1| single-strand binding protein [Escherichia blattae DSM 4481]
gi|403193246|dbj|GAB83038.1| single-stranded DNA-binding protein [Escherichia blattae NBRC
105725]
Length = 179
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|307946893|ref|ZP_07662228.1| single-stranded DNA-binding protein [Roseibium sp. TrichSKD4]
gi|307770557|gb|EFO29783.1| single-stranded DNA-binding protein [Roseibium sp. TrichSKD4]
Length = 187
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + S+ T +R E TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIANLSVATSESWRDRNSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V + L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCKVAEQFLRKGSKVYLEGQLQTRKWQD 91
>gi|293386451|ref|YP_003540613.1| single-stranded DNA-binding protein [Erwinia amylovora ATCC 49946]
gi|291201094|emb|CBJ48232.1| single-stranded DNA-binding protein [Erwinia amylovora ATCC 49946]
Length = 184
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +R+ E+ TE WH
Sbjct: 5 GVNKVILVGYLGQDPEVRYMPNGGAVANITLATSESWKDRQTGEDREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGALQTRKWTDQ-AGIEKYTTEVIVNVGGTMQML 113
>gi|356960519|ref|ZP_09063501.1| single-strand binding protein [gamma proteobacterium SCGC
AAA001-B15]
Length = 158
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +G ++ S+ T ++ + + TE WH
Sbjct: 3 GINKVILVGNLGAKPEVKYASNGNAISNLSVATSESWTDKSTGQKQERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGTYLIF 198
RVS++ +L + ++L GS +YVEG L+ + + D G R E+ + NGT +
Sbjct: 55 RVSLFG-KLAEIAGQYLDKGSKVYVEGKLQTRKWQDQ-NGQDRYTTEVVVSGFNGTLQML 112
>gi|387604960|ref|YP_006099229.1| single-stranded DNA-binding protein [Escherichia coli 042]
gi|284924674|emb|CBG27865.1| single-stranded DNA-binding protein [Escherichia coli 042]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEIRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|432979654|ref|ZP_20168440.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE211]
gi|433098381|ref|ZP_20284549.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE139]
gi|433123399|ref|ZP_20309012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE157]
gi|433137672|ref|ZP_20322978.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE166]
gi|431498079|gb|ELH77294.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE211]
gi|431612517|gb|ELI81743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE139]
gi|431634831|gb|ELJ03051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE157]
gi|431651476|gb|ELJ18726.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE166]
Length = 179
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|432619989|ref|ZP_19856052.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE75]
gi|431145748|gb|ELE47357.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE75]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|423712746|ref|ZP_17687046.1| single-strand binding protein [Bartonella washoensis Sb944nv]
gi|395410997|gb|EJF77534.1| single-strand binding protein [Bartonella washoensis Sb944nv]
Length = 146
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G +P K + SG V F + T ++ + + TE WH V
Sbjct: 4 KVMLIGFLGANPESKTMPSGGEVVNFRMATSESYTDKATNQKVDKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ L V +++L GS +Y+EG L+ + + D G R I EI + +
Sbjct: 56 IFNPHLAKVALQYLNKGSKVYIEGQLQTRKWQDK-NGHDRYITEIVLTK 103
>gi|145219141|ref|YP_001129850.1| single-strand binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205305|gb|ABP36348.1| single-strand binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG-GIRNNRRPLENENPTEYANRCAVQW 138
GI K L+G +G P +++ SG+TV F+L T ++N ++ +W
Sbjct: 4 GINKVTLIGNLGSDPEVRQIPSGQTVANFTLATSDSYKDNSGTMQER----------TEW 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
HR+ V+ RL + ++L G +Y+EG ++ + ++D TG + +I
Sbjct: 54 HRIVVW-GRLAEICGQYLKKGRQVYLEGRIQTRSWDDQKTGEKKYATDIVC 103
>gi|425281120|ref|ZP_18672274.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
gi|408194619|gb|EKI20087.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|160886220|ref|ZP_02067223.1| hypothetical protein BACOVA_04227 [Bacteroides ovatus ATCC 8483]
gi|156108105|gb|EDO09850.1| single-strand binding family protein [Bacteroides ovatus ATCC 8483]
Length = 183
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 78 DPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQ 137
D + + ILVG VGQ P K +G V F L T R N T+ R +
Sbjct: 24 DMSVNRVILVGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--E 76
Query: 138 WHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
WH + V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 77 WHNI-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 126
>gi|123444022|ref|YP_001007992.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420260209|ref|ZP_14762895.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122090983|emb|CAL13866.1| single-strand binding protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512340|gb|EKA26189.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 183
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|10955315|ref|NP_052656.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
Sakai]
gi|168752311|ref|ZP_02777333.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4113]
gi|168758957|ref|ZP_02783964.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4401]
gi|168763064|ref|ZP_02788071.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4501]
gi|168769264|ref|ZP_02794271.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4486]
gi|168777513|ref|ZP_02802520.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4196]
gi|168784340|ref|ZP_02809347.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4076]
gi|168790146|ref|ZP_02815153.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC869]
gi|168801260|ref|ZP_02826267.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC508]
gi|195939991|ref|ZP_03085373.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4024]
gi|208811302|ref|ZP_03253062.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208817453|ref|ZP_03258482.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208823394|ref|ZP_03263711.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209395627|ref|YP_002268446.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|217329905|ref|ZP_03445980.1| single-strand binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|254667507|ref|YP_003082193.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|261225679|ref|ZP_05939960.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257866|ref|ZP_05950399.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387885652|ref|YP_006315953.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|416308050|ref|ZP_11654905.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|416322665|ref|ZP_11664382.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|416332791|ref|ZP_11670658.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|419043096|ref|ZP_13590078.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3A]
gi|419050589|ref|ZP_13597479.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3B]
gi|419056167|ref|ZP_13603009.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3C]
gi|419063045|ref|ZP_13609780.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3D]
gi|419072598|ref|ZP_13618189.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3E]
gi|419083934|ref|ZP_13629368.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4A]
gi|419088981|ref|ZP_13634330.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4B]
gi|419092093|ref|ZP_13637391.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4C]
gi|419097335|ref|ZP_13642569.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4D]
gi|419103039|ref|ZP_13648199.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4E]
gi|419108136|ref|ZP_13653243.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4F]
gi|420270884|ref|ZP_14773240.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|420274435|ref|ZP_14776757.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|420283125|ref|ZP_14785356.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|420286665|ref|ZP_14788865.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|420289707|ref|ZP_14791880.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|420296711|ref|ZP_14798803.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|420305114|ref|ZP_14807109.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|420308456|ref|ZP_14810425.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|420315788|ref|ZP_14817665.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|421811780|ref|ZP_16247545.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|421816008|ref|ZP_16251584.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0821]
gi|421822795|ref|ZP_16258228.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|423652164|ref|ZP_17627660.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|424074700|ref|ZP_17812102.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|424080850|ref|ZP_17817763.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|424093537|ref|ZP_17829429.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|424093629|ref|ZP_17829510.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|424106716|ref|ZP_17841371.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|424106883|ref|ZP_17841521.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|424119079|ref|ZP_17852856.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|424119177|ref|ZP_17852946.1| single-stranded DNA-binding protein [Escherichia coli PA5]
gi|424131305|ref|ZP_17864180.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|424131411|ref|ZP_17864277.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|424137875|ref|ZP_17870253.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|424144319|ref|ZP_17876135.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|424150604|ref|ZP_17881925.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|424175397|ref|ZP_17887518.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|424336610|ref|ZP_17898786.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|424416861|ref|ZP_17899003.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|424453013|ref|ZP_17904609.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|424459262|ref|ZP_17910295.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|424465744|ref|ZP_17915993.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|424472207|ref|ZP_17921924.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|424484086|ref|ZP_17933037.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|424484247|ref|ZP_17933177.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|424497202|ref|ZP_17944622.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|424503773|ref|ZP_17950616.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|424510032|ref|ZP_17956360.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|424517475|ref|ZP_17961994.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|424517623|ref|ZP_17962108.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|424529405|ref|ZP_17973090.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|424529528|ref|ZP_17973200.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|424547844|ref|ZP_17990121.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|424554120|ref|ZP_17995900.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|424560215|ref|ZP_18001572.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|424560353|ref|ZP_18001697.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|424566492|ref|ZP_18007465.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|424584804|ref|ZP_18024423.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|425101219|ref|ZP_18503926.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.2239]
gi|425108793|ref|ZP_18510980.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|425122879|ref|ZP_18524518.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.0586]
gi|425135219|ref|ZP_18536004.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|425138390|ref|ZP_18538858.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|425147373|ref|ZP_18547336.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0869]
gi|425159237|ref|ZP_18558474.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|425162772|ref|ZP_18561710.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|425167314|ref|ZP_18565984.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|425180935|ref|ZP_18578652.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|425189686|ref|ZP_18586925.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|425192276|ref|ZP_18589283.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|425196385|ref|ZP_18593110.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|425202927|ref|ZP_18599094.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|425221371|ref|ZP_18616295.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|425221485|ref|ZP_18616401.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|425233939|ref|ZP_18627954.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|425234093|ref|ZP_18628094.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|425239882|ref|ZP_18633573.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|425258266|ref|ZP_18650725.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|425258420|ref|ZP_18650852.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|425270441|ref|ZP_18662037.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|425298012|ref|ZP_18688082.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|425314606|ref|ZP_18703742.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|425320650|ref|ZP_18709397.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|425326832|ref|ZP_18715123.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|425333068|ref|ZP_18720846.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|425339270|ref|ZP_18726564.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|425342421|ref|ZP_18729400.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|425351413|ref|ZP_18737843.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|425357521|ref|ZP_18743555.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|425363632|ref|ZP_18749252.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|425369937|ref|ZP_18754961.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|425376053|ref|ZP_18760662.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|425389232|ref|ZP_18772765.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|425389447|ref|ZP_18772950.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|425401744|ref|ZP_18784416.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|425401870|ref|ZP_18784523.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|425414156|ref|ZP_18795892.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|425414528|ref|ZP_18796204.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|425425604|ref|ZP_18806706.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|428944151|ref|ZP_19016854.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1467]
gi|428956208|ref|ZP_19027971.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1042]
gi|428956314|ref|ZP_19028068.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 89.0511]
gi|428968864|ref|ZP_19039538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0091]
gi|428975004|ref|ZP_19045246.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0039]
gi|428975145|ref|ZP_19045362.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.2281]
gi|428987045|ref|ZP_19056392.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0055]
gi|428992962|ref|ZP_19061923.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0056]
gi|428993058|ref|ZP_19062013.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 94.0618]
gi|428999035|ref|ZP_19067595.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0183]
gi|429011530|ref|ZP_19078867.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.1288]
gi|429017708|ref|ZP_19084559.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0943]
gi|429017853|ref|ZP_19084677.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0428]
gi|429029903|ref|ZP_19095820.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0939]
gi|429041891|ref|ZP_19106942.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0932]
gi|429042007|ref|ZP_19107051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0107]
gi|429050351|ref|ZP_19114953.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0003]
gi|429055747|ref|ZP_19120133.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.1742]
gi|429064353|ref|ZP_19128277.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0007]
gi|429070636|ref|ZP_19134033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0672]
gi|429076131|ref|ZP_19139363.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|429076597|ref|ZP_19139820.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0713]
gi|429823316|ref|ZP_19354906.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0109]
gi|429829773|ref|ZP_19360726.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0010]
gi|444922014|ref|ZP_21241806.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|444942083|ref|ZP_21260641.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0816]
gi|444947504|ref|ZP_21265856.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0839]
gi|444951797|ref|ZP_21270001.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0848]
gi|444956001|ref|ZP_21274030.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1753]
gi|444966845|ref|ZP_21284355.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1775]
gi|444966920|ref|ZP_21284423.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1793]
gi|444979431|ref|ZP_21296410.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli ATCC 700728]
gi|444983340|ref|ZP_21300217.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA11]
gi|444994015|ref|ZP_21310636.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA19]
gi|444999351|ref|ZP_21315831.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA13]
gi|445002602|ref|ZP_21318999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA2]
gi|445004823|ref|ZP_21321188.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA47]
gi|445015586|ref|ZP_21331658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA48]
gi|445018390|ref|ZP_21334376.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA8]
gi|445021272|ref|ZP_21337208.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 7.1982]
gi|445029792|ref|ZP_21345477.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1781]
gi|445034969|ref|ZP_21350513.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1762]
gi|445045458|ref|ZP_21360748.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.4880]
gi|445051137|ref|ZP_21366224.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0083]
gi|445054134|ref|ZP_21369098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0670]
gi|452967862|ref|ZP_21966089.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4009]
gi|3337047|dbj|BAA31806.1| single-strand binding protein [Escherichia coli O157:H7 str. Sakai]
gi|187767263|gb|EDU31107.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4196]
gi|188013818|gb|EDU51940.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4113]
gi|188998480|gb|EDU67476.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4076]
gi|189354334|gb|EDU72753.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4401]
gi|189361618|gb|EDU80037.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4486]
gi|189366719|gb|EDU85135.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4501]
gi|189370343|gb|EDU88759.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC869]
gi|189376575|gb|EDU94991.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC508]
gi|208729932|gb|EDZ79149.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208730630|gb|EDZ79329.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208736989|gb|EDZ84674.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209157082|gb|ACI34516.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|217317136|gb|EEC25569.1| single-strand binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|254595859|gb|ACT75219.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|320188679|gb|EFW63340.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|326337204|gb|EGD61040.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|326347701|gb|EGD71419.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|377897374|gb|EHU61755.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3B]
gi|377901831|gb|EHU66144.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3A]
gi|377905550|gb|EHU69815.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3E]
gi|377910966|gb|EHU75145.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3D]
gi|377911072|gb|EHU75250.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3C]
gi|377921234|gb|EHU85235.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4A]
gi|377926935|gb|EHU90861.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4B]
gi|377945546|gb|EHV09240.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4C]
gi|377948625|gb|EHV12274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4D]
gi|377952678|gb|EHV16260.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4E]
gi|377965632|gb|EHV29049.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4F]
gi|386799110|gb|AFJ32143.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|390635948|gb|EIN15559.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|390654728|gb|EIN32755.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|390654807|gb|EIN32818.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|390655455|gb|EIN33396.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|390671469|gb|EIN47897.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|390671873|gb|EIN48246.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|390679181|gb|EIN55106.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|390679777|gb|EIN55651.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|390695382|gb|EIN69915.1| single-stranded DNA-binding protein [Escherichia coli PA5]
gi|390709901|gb|EIN82941.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|390713131|gb|EIN86071.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|390713699|gb|EIN86630.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|390716247|gb|EIN89058.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|390723171|gb|EIN95789.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|390735099|gb|EIO06523.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|390735224|gb|EIO06621.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|390754006|gb|EIO23637.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|390754233|gb|EIO23852.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|390758521|gb|EIO27963.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|390761015|gb|EIO30323.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|390777563|gb|EIO45365.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|390779208|gb|EIO46940.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|390782104|gb|EIO49769.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|390783801|gb|EIO51388.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|390790670|gb|EIO58081.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|390791566|gb|EIO58950.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|390803324|gb|EIO70336.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|390810949|gb|EIO77673.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|390815769|gb|EIO82292.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|390818267|gb|EIO84657.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390820912|gb|EIO87158.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|390825712|gb|EIO91620.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|390826351|gb|EIO92204.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|390838751|gb|EIP02939.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|390846529|gb|EIP10109.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|390856959|gb|EIP19494.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|390864727|gb|EIP26808.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|390873061|gb|EIP34314.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|390873454|gb|EIP34658.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|390878819|gb|EIP39631.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|390903029|gb|EIP62091.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|390908129|gb|EIP66965.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|390913153|gb|EIP71760.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|390913952|gb|EIP72504.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|390918549|gb|EIP76944.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|408061653|gb|EKG96162.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|408075007|gb|EKH09252.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|408081803|gb|EKH15807.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|408088135|gb|EKH21521.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|408097861|gb|EKH30718.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|408100009|gb|EKH32577.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|408116553|gb|EKH47849.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|408132816|gb|EKH62757.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|408133479|gb|EKH63377.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|408133811|gb|EKH63685.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|408143105|gb|EKH72435.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|408155887|gb|EKH84135.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|408168373|gb|EKH95799.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|408169264|gb|EKH96556.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|408175429|gb|EKI02346.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|408179279|gb|EKI05963.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|408194871|gb|EKI20309.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|408207973|gb|EKI32656.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|408222785|gb|EKI46608.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|408233901|gb|EKI56957.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|408235781|gb|EKI58710.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|408241811|gb|EKI64423.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|408250722|gb|EKI72532.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|408261628|gb|EKI82597.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|408261844|gb|EKI82803.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|408270367|gb|EKI90562.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|408272613|gb|EKI92691.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|408280741|gb|EKJ00219.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|408287306|gb|EKJ06184.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|408303015|gb|EKJ20486.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|408314855|gb|EKJ31232.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|408320557|gb|EKJ36651.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408321769|gb|EKJ37774.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|408339813|gb|EKJ54351.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|408351352|gb|EKJ65133.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|408353862|gb|EKJ67339.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|408557136|gb|EKK33674.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|408561824|gb|EKK38017.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.2239]
gi|408575142|gb|EKK50841.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|408582346|gb|EKK57568.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|408586900|gb|EKK61601.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.0586]
gi|408587278|gb|EKK61938.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0869]
gi|408603289|gb|EKK76935.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|408618554|gb|EKK91629.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0821]
gi|427200314|gb|EKV70744.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1042]
gi|427216550|gb|EKV85658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0091]
gi|427219795|gb|EKV88749.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 89.0511]
gi|427220293|gb|EKV89226.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1467]
gi|427221078|gb|EKV89953.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0039]
gi|427236052|gb|EKW03653.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.2281]
gi|427236105|gb|EKW03702.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0055]
gi|427236631|gb|EKW04193.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0056]
gi|427255865|gb|EKW22103.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 94.0618]
gi|427255875|gb|EKW22112.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.1288]
gi|427256560|gb|EKW22720.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0943]
gi|427272767|gb|EKW37491.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0183]
gi|427287727|gb|EKW51459.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0428]
gi|427287985|gb|EKW51655.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0932]
gi|427295135|gb|EKW58274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0939]
gi|427301939|gb|EKW64787.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0003]
gi|427308825|gb|EKW71166.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0007]
gi|427312895|gb|EKW75033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0107]
gi|427313797|gb|EKW75878.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0672]
gi|427315243|gb|EKW77250.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.1742]
gi|427324113|gb|EKW85604.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|427334967|gb|EKW96026.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0713]
gi|429261167|gb|EKY44627.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0109]
gi|429262554|gb|EKY45861.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0010]
gi|444552933|gb|ELV30664.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|444559536|gb|ELV36753.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0839]
gi|444560253|gb|ELV37425.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0816]
gi|444569336|gb|ELV45936.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1775]
gi|444569581|gb|ELV46162.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0848]
gi|444584041|gb|ELV59714.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1753]
gi|444587749|gb|ELV63160.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1793]
gi|444598079|gb|ELV73018.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli ATCC 700728]
gi|444601511|gb|ELV76312.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA11]
gi|444601743|gb|ELV76510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA19]
gi|444601751|gb|ELV76517.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA13]
gi|444615789|gb|ELV89978.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA2]
gi|444617676|gb|ELV91785.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA48]
gi|444630985|gb|ELW04607.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA8]
gi|444634920|gb|ELW08366.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA47]
gi|444641326|gb|ELW14559.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1781]
gi|444645762|gb|ELW18816.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1762]
gi|444649359|gb|ELW22258.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 7.1982]
gi|444662018|gb|ELW34288.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.4880]
gi|444666495|gb|ELW38560.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0083]
gi|444675223|gb|ELW46697.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0670]
Length = 150
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|420728134|ref|ZP_15206495.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-60]
gi|391605834|gb|EIS48655.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-60]
Length = 164
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|345877715|ref|ZP_08829454.1| Lon protease 2 [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344225245|gb|EGV51609.1| Lon protease 2 [endosymbiont of Riftia pachyptila (vent Ph05)]
Length = 156
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + + SG VT ++ T ++ E + TE WH
Sbjct: 12 GINKVILIGNLGRDPETRYMPSGGAVTNVTVATSDSWKDKNTGEQQERTE--------WH 63
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV V+ RL + ++L GS +YVEG L+ + +
Sbjct: 64 RV-VFFNRLAEIAAEYLKKGSKVYVEGRLQTRKW 96
>gi|289812038|ref|ZP_06542667.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 176
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +R+ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDRQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIGGVM 111
>gi|222104875|ref|YP_002539364.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli chi7122]
gi|387615302|ref|YP_006162300.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|417311327|ref|ZP_12098077.1| Plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PCN033]
gi|422962334|ref|ZP_16972838.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|425382949|ref|ZP_18766893.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|432375287|ref|ZP_19618304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE12]
gi|221589300|gb|ACM18297.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli chi7122]
gi|312949147|gb|ADR29973.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|338767085|gb|EGP21955.1| Plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PCN033]
gi|371592243|gb|EHN81158.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|408291417|gb|EKJ10035.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|430901985|gb|ELC23879.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE12]
Length = 179
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|104779786|ref|YP_606284.1| single-stranded DNA-binding protein [Pseudomonas entomophila L48]
gi|95108773|emb|CAK13467.1| ssDNA-binding protein [Pseudomonas entomophila L48]
Length = 180
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|408379630|ref|ZP_11177223.1| single-stranded DNA-binding protein [Agrobacterium albertimagni
AOL15]
gi|407746441|gb|EKF57964.1| single-stranded DNA-binding protein [Agrobacterium albertimagni
AOL15]
Length = 181
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P ++ + GR + + T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGADPEIRRTQDGRPIANLRIATSETWRDKNSGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L GST+Y+EG L+ + + D +G R E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGQLQTRKWQDQ-SGADRYSTEVVLQ 105
>gi|156315132|ref|XP_001617943.1| hypothetical protein NEMVEDRAFT_v1g9216 [Nematostella vectensis]
gi|156196602|gb|EDO25843.1| predicted protein [Nematostella vectensis]
Length = 104
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L SG VT SL T +++ + TE WH
Sbjct: 5 GVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI +
Sbjct: 57 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GVKRYTTEIIV 103
>gi|300825069|ref|ZP_07105165.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|301304391|ref|ZP_07210504.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|415866795|ref|ZP_11539178.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|300522469|gb|EFK43538.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|300840378|gb|EFK68138.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|315253234|gb|EFU33202.1| single-strand binding family protein [Escherichia coli MS 85-1]
Length = 192
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|152979537|ref|YP_001345166.1| single-strand binding protein [Actinobacillus succinogenes 130Z]
gi|150841260|gb|ABR75231.1| single-strand binding protein [Actinobacillus succinogenes 130Z]
Length = 159
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG++G P + + +G V S+ T N+R E TE WH
Sbjct: 3 GVNKVIIVGRLGNDPEIRTMPNGEAVANISVATSESWNDRNTGERREVTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ Y R +V ++L GS IYVEG L + + D
Sbjct: 55 RIVFY-RRQAEIVGEYLRKGSQIYVEGRLRTRKWQD 89
>gi|417536086|ref|ZP_12189355.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|353654966|gb|EHC96110.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
Length = 182
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E TE WH
Sbjct: 6 GVNKVILVGNLGQDPEVRYMPNGGAVANLTLATSESWRDKADGEMREHTE--------WH 57
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV V+ +L + ++L G+ +Y+EG L + + D +G + E+ + +NGT
Sbjct: 58 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVGQNGT 110
>gi|300724705|ref|YP_003714030.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
gi|297631247|emb|CBJ91942.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
Length = 171
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R EI + GT +
Sbjct: 57 RVVIFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVVNIGGTMQML 113
>gi|433186510|ref|ZP_20370708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE85]
gi|431698107|gb|ELJ63170.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE85]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRSRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|395782069|ref|ZP_10462477.1| single-stranded DNA-binding protein [Bartonella rattimassiliensis
15908]
gi|395419801|gb|EJF86091.1| single-stranded DNA-binding protein [Bartonella rattimassiliensis
15908]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH V
Sbjct: 7 KVILIGNLGSDPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L + ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKIAEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|238760295|ref|ZP_04621438.1| Single-stranded DNA-binding protein [Yersinia aldovae ATCC 35236]
gi|238701497|gb|EEP94071.1| Single-stranded DNA-binding protein [Yersinia aldovae ATCC 35236]
Length = 183
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|378826043|ref|YP_005188775.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Sinorhizobium fredii HH103]
gi|365179095|emb|CCE95950.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Sinorhizobium fredii HH103]
Length = 170
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R E+ ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYTTEVVLQ 105
>gi|407769167|ref|ZP_11116544.1| ssDNA-binding protein [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288087|gb|EKF13566.1| ssDNA-binding protein [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 174
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P + ++G+ + FS+ T +R+ E TE WHR+
Sbjct: 7 KVILVGNLGRDPEIRFTQAGKKIANFSIATSEQWRDRQSGERRERTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNL 168
V+ E L VV + + GS +Y+EG L
Sbjct: 59 VFNEGLADVVERFVKKGSKLYIEGQL 84
>gi|169634207|ref|YP_001707943.1| single-strand binding protein (helix-destabilizing protein)
[Acinetobacter baumannii SDF]
gi|169152999|emb|CAP02055.1| putative Single-strand binding protein (Helix-destabilizing
protein) [Acinetobacter baumannii]
Length = 117
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P+ ++ +G ++ FS+ T ++R + TE WH
Sbjct: 3 GINKVILVGSLGADPITRQFPNGSSIANFSIATSEKWQDKRTGDWIENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V +LG + K L GS +++EG+L + + D
Sbjct: 55 RI-VANNKLGEIAQKILKKGSKVFIEGSLRTRQWTD 89
>gi|168467974|ref|ZP_02701811.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418801044|ref|ZP_13356685.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|195628932|gb|EDX48334.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392781204|gb|EJA37846.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 178
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G+ P + L + V L T +++ E ++ TE WH
Sbjct: 5 GINKVILVGALGRDPEVRYLPDNKAVASLQLATNESWRDKQTGEMKDKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEIVVGQKGTMQML 113
>gi|432414426|ref|ZP_19657073.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE39]
gi|432449013|ref|ZP_19691299.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|430931579|gb|ELC52023.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE39]
gi|430969368|gb|ELC86488.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRSRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|407774935|ref|ZP_11122231.1| ssDNA-binding protein [Thalassospira profundimaris WP0211]
gi|407281883|gb|EKF07443.1| ssDNA-binding protein [Thalassospira profundimaris WP0211]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P + ++G+ + FS+ T +R+ E TE WHR+
Sbjct: 7 KVILVGNLGRDPEIRFTQAGKKIANFSIATSEQWRDRQSGERRERTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNL 168
V+ E L VV + + GS +Y+EG L
Sbjct: 59 VFNEGLADVVERFVKKGSKLYIEGQL 84
>gi|386622275|ref|YP_006141855.1| ssDNA-binding protein [Escherichia coli NA114]
gi|333972776|gb|AEG39581.1| Single-stranded DNA-binding protein [Escherichia coli NA114]
Length = 173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|56961730|gb|AAW31821.1| Orf146 [Dichelobacter nodosus]
Length = 146
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G VGQ+P + + + + V FSL T N+R+ E TE W
Sbjct: 2 AGVNKVILLGYVGQNPDVRIMTNEQQVANFSLATNISWNDRQTGEKCTKTE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
HR Y RL ++ +++ GS +Y+EG LE + +
Sbjct: 54 HRCVAY-RRLAEIIGQYVRKGSQLYLEGRLETRKW 87
>gi|421790024|ref|ZP_16226262.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|410396348|gb|EKP48619.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
Length = 108
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
P + K ++G +G+ P K+ +G +VT FS+ T ++ E + TE W
Sbjct: 2 PNVNKVTVMGVLGRDPETKQFPNGGSVTTFSVATTEFWKDKTTGERKEATE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
HR++ RL + K+L G +Y+EG+L + + D G + I EI
Sbjct: 54 HRITT-SNRLAEIASKYLKKGGKVYIEGSLRTRKWKDS-KGAEKEITEI 100
>gi|110589368|gb|ABG77193.1| single stranded DNA-binding protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 156
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + + SG VT ++ T ++ E + TE WH
Sbjct: 12 GINKVILIGNLGRDPETRYMPSGGAVTNVTVATSDSWKDKNTGEQQERTE--------WH 63
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV V+ RL + ++L GS +YVEG L+ + +
Sbjct: 64 RV-VFFNRLAEIAAEYLKKGSKVYVEGRLQTRKW 96
>gi|148284682|ref|YP_001248772.1| single-stranded DNA-binding protein [Orientia tsutsugamushi str.
Boryong]
gi|146740121|emb|CAM80303.1| single-stranded DNA-binding protein [Orientia tsutsugamushi str.
Boryong]
Length = 155
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
+ L+G +G P +K G+ + FSL T ++ E + TE WHR+
Sbjct: 7 RVTLIGNLGHDPEIRKTNDGKEIAAFSLATTETWRDKHSNEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+ + + ++ ++ GS + +EG+L+ + + D +G + EI ++ LI
Sbjct: 59 VFNDGIVNIIKNYVKKGSKVLIEGSLQTRKWQDS-SGQEKYTTEIILQNYNASLILL 114
>gi|309798193|ref|ZP_07692559.1| single-strand binding family protein [Escherichia coli MS 145-7]
gi|308118220|gb|EFO55482.1| single-strand binding family protein [Escherichia coli MS 145-7]
Length = 192
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|196017671|ref|XP_002118605.1| hypothetical protein TRIADDRAFT_34467 [Trichoplax adhaerens]
gi|190578646|gb|EDV18909.1| hypothetical protein TRIADDRAFT_34467 [Trichoplax adhaerens]
Length = 166
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 81 IFKAILVGQVGQSP-VQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
I K I+VG VG P ++ SG + FS+ T ++ E + TE WH
Sbjct: 5 INKVIIVGNVGNQPEIRLTQASGEELATFSVATSERWKDKSTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
RV V+ L VV K++ GS +Y+EG L+ + + D +G+ + EI + + L+
Sbjct: 57 RVVVFSPGLVRVVKKYVHKGSKLYIEGKLKTRDYEDE-SGVKKYTTEIVLASYSSTLVLL 115
>gi|134904|sp|P28044.2|SSB7_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|417860060|ref|ZP_12505116.1| single-strand DNA-binding protein [Agrobacterium tumefaciens F2]
gi|338823124|gb|EGP57092.1| single-strand DNA-binding protein [Agrobacterium tumefaciens F2]
Length = 199
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 26 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSESWRDRNSGERKEKTE--------WHT 77
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 78 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 126
>gi|226227354|ref|YP_002761460.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
gi|226090545|dbj|BAH38990.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
Length = 170
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG P + + +G V FSL TG R +++ T+ +WHR
Sbjct: 7 KVILIGNVGGDPEVRTVGTGGRVAQFSLATG------RNWTDQSGTKQEK---TEWHRCV 57
Query: 143 VYPER----LGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ L VV K++ G IYVEG +E + + D G R EI +R
Sbjct: 58 VWNNSRGSGLADVVEKYVRKGEKIYVEGEIEYRQWQDK-DGQTRYTTEIRVR 108
>gi|238798500|ref|ZP_04641979.1| Single-stranded DNA-binding protein [Yersinia mollaretii ATCC
43969]
gi|238717662|gb|EEQ09499.1| Single-stranded DNA-binding protein [Yersinia mollaretii ATCC
43969]
Length = 182
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|75994530|ref|YP_325644.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EDL933]
gi|149930831|ref|YP_001294727.1| single-stranded DNA-binding protein [Escherichia coli]
gi|37695819|gb|AAR00481.1|AF401292_84 w0063 [Escherichia coli]
gi|3822198|gb|AAC70152.1| single strand binding protein [Escherichia coli O157:H7 str.
EDL933]
Length = 163
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|401761840|ref|YP_006576847.1| ssDNA-binding protein [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400173374|gb|AFP68223.1| ssDNA-binding protein [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGAEKYTTEVVVNVGGTMQML 113
>gi|392977179|ref|YP_006475767.1| single-strand binding protein [Enterobacter cloacae subsp.
dissolvens SDM]
gi|401678894|ref|ZP_10810847.1| single-strand binding protein [Enterobacter sp. SST3]
gi|392323112|gb|AFM58065.1| single-strand binding protein [Enterobacter cloacae subsp.
dissolvens SDM]
gi|400213879|gb|EJO44812.1| single-strand binding protein [Enterobacter sp. SST3]
Length = 174
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGAEKYTTEVVVNVGGTMQML 113
>gi|227822108|ref|YP_002826079.1| single-stranded DNA-binding protein [Sinorhizobium fredii NGR234]
gi|227341108|gb|ACP25326.1| ssDNA-binding protein [Sinorhizobium fredii NGR234]
Length = 172
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ E L VV +++ G+ +Y+EG L+ + + D
Sbjct: 57 VVVFSEGLCKVVEQYVKKGAKLYIEGQLQTRKWQD 91
>gi|319408089|emb|CBI81742.1| Single-stranded DNA-binding protein [Bartonella schoenbuchensis R1]
Length = 148
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G P + + SG V F + T ++ E TE WH
Sbjct: 2 INKVILVGNLGADPESRTMTSGAEVVNFRIATSQSYTDKTTGEKVEKTE--------WHS 53
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+ V+ L V +++L GS +YVEG L+ + + D
Sbjct: 54 IVVFNPHLAKVALQYLGKGSKVYVEGQLQTRKWQD 88
>gi|187476594|ref|YP_784618.1| single-strand binding protein [Bordetella avium 197N]
gi|115421180|emb|CAJ47674.1| single-strand binding protein [Bordetella avium 197N]
Length = 166
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + G + SL T ++ E TE WHR
Sbjct: 4 VNKVILVGNLGRDPEVRYSPDGAAICNLSLATTSQWKDKASGERREETE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V +Y RL + ++L G ++Y+EG L+ + + D TG R EI
Sbjct: 56 VVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEI 101
>gi|432864748|ref|ZP_20088059.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
gi|431402970|gb|ELG86272.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
Length = 154
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|227554|prf||1706408B ssDNA binding protein
Length = 174
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 4 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 56 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 111
>gi|398800278|ref|ZP_10559551.1| single stranded DNA-binding protein [Pantoea sp. GM01]
gi|398095806|gb|EJL86139.1| single stranded DNA-binding protein [Pantoea sp. GM01]
Length = 184
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|422890436|ref|ZP_16932862.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-40A1]
gi|341627798|gb|EGS53094.1| single-stranded DNA-binding protein [Vibrio cholerae HC-40A1]
Length = 168
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|443534094|ref|ZP_21100015.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-80A1]
gi|443462738|gb|ELT33768.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-80A1]
Length = 162
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|90424252|ref|YP_532622.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
BisB18]
gi|90106266|gb|ABD88303.1| single-strand binding protein [Rhodopseudomonas palustris BisB18]
Length = 169
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T ++ E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCRIAEQYLKKGAKVYIEGQLQTRKWTD 91
>gi|260751871|ref|YP_003237785.1| putative single-strand DNA-binding protein Ssb [Escherichia coli
O111:H- str. 11128]
gi|415817200|ref|ZP_11507443.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli OK1180]
gi|417196792|ref|ZP_12016185.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
gi|419200667|ref|ZP_13743927.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8A]
gi|257767863|dbj|BAI39355.1| putative single-strand DNA-binding protein Ssb [Escherichia coli
O111:H- str. 11128]
gi|323181095|gb|EFZ66630.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli OK1180]
gi|378039066|gb|EHW01570.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8A]
gi|386188982|gb|EIH77766.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|260773657|ref|ZP_05882573.1| single-stranded DNA-binding protein [Vibrio metschnikovii CIP
69.14]
gi|260612796|gb|EEX37999.1| single-stranded DNA-binding protein [Vibrio metschnikovii CIP
69.14]
Length = 172
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V +L T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGADPEVRYMASGAAVANITLATSESWRDKTTGEQRERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++
Sbjct: 57 RVALYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|421495356|ref|ZP_15942643.1| ssb [Aeromonas media WS]
gi|407185671|gb|EKE59441.1| ssb [Aeromonas media WS]
Length = 155
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + G + SL T +++ E + TE WH
Sbjct: 3 GINKVILIGNLGQDPEIRYTSGGMAIATLSLATSESWRDKQTGEQKERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 55 RV-VLVGKLAEVAGQYLKKGSQVYVEGKLQTRKWQDQ-SGQDRYTTEVQV 102
>gi|345872470|ref|ZP_08824404.1| single-strand binding protein [Thiorhodococcus drewsii AZ1]
gi|343918867|gb|EGV29626.1| single-strand binding protein [Thiorhodococcus drewsii AZ1]
Length = 170
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + L SG V SL T ++ E+ TE WH
Sbjct: 4 GINKVILIGNLGVDPEVRALPSGDAVANLSLATSETWTDKTSGESRERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV ++ RL + ++L GS +Y+EG L + +
Sbjct: 56 RVVLF-GRLADIAAQYLHSGSKVYIEGKLRTRQY 88
>gi|345134027|ref|YP_004823709.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|417720679|ref|ZP_12369537.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|417720780|ref|ZP_12369637.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|429723658|ref|ZP_19258538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9450]
gi|432360978|ref|ZP_19604177.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE4]
gi|333011547|gb|EGK30960.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|333011661|gb|EGK31070.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|345109169|dbj|BAK64452.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|429394597|gb|EKZ30972.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9450]
gi|430871566|gb|ELB95206.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE4]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQML 112
>gi|260767311|ref|ZP_05876251.1| single-stranded DNA-binding protein [Vibrio furnissii CIP 102972]
gi|260617718|gb|EEX42897.1| single-stranded DNA-binding protein [Vibrio furnissii CIP 102972]
Length = 177
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGSDPEVRYMPSGGAVANITVATSETWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGTYLIF 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NGT +
Sbjct: 57 RVALYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGTMQML 114
>gi|261341524|ref|ZP_05969382.1| single-strand binding protein [Enterobacter cancerogenus ATCC
35316]
gi|288316323|gb|EFC55261.1| single-strand binding protein [Enterobacter cancerogenus ATCC
35316]
gi|295095424|emb|CBK84514.1| single-strand binding protein [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 176
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGAEKYTTEVVVNVGGTMQML 113
>gi|224586021|ref|YP_002639820.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|375004134|ref|ZP_09728469.1| single-strand binding family protein [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|378447575|ref|YP_005235207.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|383498835|ref|YP_005399524.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|224470549|gb|ACN48379.1| ssDNA-binding protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261249354|emb|CBG27217.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267996568|gb|ACY91453.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|353073472|gb|EHB39237.1| single-strand binding family protein [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|380465656|gb|AFD61059.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
Length = 217
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 46 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTE--------WH 97
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G
Sbjct: 98 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIG 149
>gi|89069575|ref|ZP_01156919.1| single-strand binding protein [Oceanicola granulosus HTCC2516]
gi|89044910|gb|EAR51000.1| single-strand binding protein [Oceanicola granulosus HTCC2516]
Length = 169
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILIGNLGRDPETRTFQNGGKVCNLRIATSENWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L + ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGADRYSTEVVLR 105
>gi|329890208|ref|ZP_08268551.1| single-stranded DNA-binding protein [Brevundimonas diminuta ATCC
11568]
gi|328845509|gb|EGF95073.1| single-stranded DNA-binding protein [Brevundimonas diminuta ATCC
11568]
Length = 166
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + L +G V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEIRSLNNGDRVANLRIATSETWRDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ + + V +L GST+YVEG+L+ + + D G+ + EI I+R
Sbjct: 57 VVIFNDNIVKVAENYLKKGSTVYVEGSLQTRKWTDQ-QGVEKYSTEIVIQR 106
>gi|92117607|ref|YP_577336.1| single-stranded DNA-binding protein [Nitrobacter hamburgensis X14]
gi|91800501|gb|ABE62876.1| single-strand binding protein [Nitrobacter hamburgensis X14]
Length = 163
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T ++ E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKTSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGQLQTRKWTD 91
>gi|402487716|ref|ZP_10834534.1| single-stranded DNA-binding protein [Rhizobium sp. CCGE 510]
gi|401813585|gb|EJT05929.1| single-stranded DNA-binding protein [Rhizobium sp. CCGE 510]
Length = 168
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|424895016|ref|ZP_18318590.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393179243|gb|EJC79282.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 170
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|389694862|ref|ZP_10182956.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
gi|388588248|gb|EIM28541.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L +G V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRRLSNGEPVVNLRIATSETWKDKGTGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E L V ++L GS +YVEG L+ + + D G + E+ ++R
Sbjct: 57 VVIFNENLARVAEQYLKKGSKVYVEGQLQTRKWTDQ-QGQEKYTTEVVLQR 106
>gi|386616991|ref|YP_006136657.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
gi|332346160|gb|AEE59494.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
Length = 178
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GINKVILIGHLGQDPELRYFPNGGGAVANLTLATSESWRDKQSGEMKEQTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
HRV ++ +L + ++L GS +Y+EG L+ + + D G+ R E+ + NGT +
Sbjct: 57 HRVVIF-GKLAEIAGEYLRKGSQVYIEGQLKTRKWFDQQNGVDRYATEVVVSVNGTLQML 115
>gi|294647095|ref|ZP_06724701.1| single-strand binding family protein [Bacteroides ovatus SD CC 2a]
gi|294807155|ref|ZP_06765972.1| single-strand binding family protein [Bacteroides xylanisolvens SD
CC 1b]
gi|292637559|gb|EFF55971.1| single-strand binding family protein [Bacteroides ovatus SD CC 2a]
gi|294445655|gb|EFG14305.1| single-strand binding family protein [Bacteroides xylanisolvens SD
CC 1b]
Length = 183
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 78 DPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQ 137
D + + IL+G VGQ P K +G V F L T R N T+ R +
Sbjct: 24 DMSVNRVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--E 76
Query: 138 WHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
WH + V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 77 WHNI-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 126
>gi|209549338|ref|YP_002281255.1| single-stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424913981|ref|ZP_18337345.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209535094|gb|ACI55029.1| single-strand binding protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|392850157|gb|EJB02678.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 168
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|421778837|ref|ZP_16215384.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AD30]
gi|408456089|gb|EKJ79933.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AD30]
Length = 177
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|213609958|ref|ZP_03369784.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 216
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 45 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTE--------WH 96
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G
Sbjct: 97 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIG 148
>gi|32470104|ref|NP_863047.1| single-stranded DNA-binding protein [Escherichia coli]
gi|58383257|ref|YP_194827.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|170650901|ref|YP_001739944.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli SMS-3-5]
gi|310286500|ref|YP_003937761.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410651668|ref|YP_006954789.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin]
gi|415773145|ref|ZP_11485851.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|415775117|ref|ZP_11487105.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|417210578|ref|ZP_12021153.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli JB1-95]
gi|417250488|ref|ZP_12042270.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0967]
gi|418832021|ref|ZP_13386969.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|419140328|ref|ZP_13685097.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC5E]
gi|419213018|ref|ZP_13756067.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8C]
gi|419342698|ref|ZP_13884143.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|420108004|ref|ZP_14618306.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|425382963|ref|ZP_18766906.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|432915668|ref|ZP_20120898.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE190]
gi|433021740|ref|ZP_20209794.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE105]
gi|450233978|ref|ZP_21898323.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
gi|28629361|gb|AAO49641.1| Ssb [Escherichia coli]
gi|37962736|gb|AAR05683.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|170522177|gb|ACB20354.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli SMS-3-5]
gi|308826829|emb|CBX36102.1| single-stranded DNA-binding protein [Escherichia coli]
gi|315617925|gb|EFU98520.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|315619250|gb|EFU99826.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|327536661|gb|AEA95493.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin]
gi|377976577|gb|EHV39883.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC5E]
gi|378045684|gb|EHW08077.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8C]
gi|378181176|gb|EHX41849.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|386195888|gb|EIH90122.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli JB1-95]
gi|386219390|gb|EII35856.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0967]
gi|392798272|gb|EJA54551.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|394411356|gb|EJE85617.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|408291338|gb|EKJ09971.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|409924829|gb|AFV47303.1| single strand DNA binding protein [uncultured bacterium]
gi|431434692|gb|ELH16338.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE190]
gi|431524874|gb|ELI01697.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE105]
gi|449311546|gb|EMD01903.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|21233779|ref|NP_640077.1| single-strand DNA binding protein [Proteus vulgaris]
gi|37999441|sp|Q8L2A6.1|SSB_PROVU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21202963|dbj|BAB93679.1| single-strand DNA binding protein [Proteus vulgaris]
Length = 195
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VGQ P + + +G V +L T +++ E++ TE WH
Sbjct: 5 GVNKVILVGNVGQDPEVRYMPNGGAVANLTLATSETWRDKQTGESKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + + + GS IY+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEITGEFVKKGSQIYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|422837093|ref|ZP_16885118.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E101]
gi|371605367|gb|EHN93983.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E101]
Length = 177
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREHTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|29346907|ref|NP_810410.1| single-strand binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|37999425|sp|Q8A7M7.1|SSB_BACTN RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|29338805|gb|AAO76604.1| single-strand binding protein (SSB) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 161
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VGQ P K +G V F L T R N T+ R +WH
Sbjct: 3 VNKVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--EWHN 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 56 I-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIFV 102
>gi|291289343|ref|YP_003517675.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|290792304|gb|ADD63629.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
Length = 226
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|432473751|ref|ZP_19715781.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE206]
gi|433080869|ref|ZP_20267351.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE131]
gi|430994393|gb|ELD10723.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE206]
gi|431589956|gb|ELI61071.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE131]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|420673060|ref|ZP_15158259.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-46]
gi|420743936|ref|ZP_15220714.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-64]
gi|420803411|ref|ZP_15272978.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-93]
gi|391561430|gb|EIS09958.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-46]
gi|391629745|gb|EIS69633.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-64]
gi|391686865|gb|EIT20243.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-93]
Length = 131
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|332163180|ref|YP_004299757.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310192|ref|YP_006006248.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243173|ref|ZP_12869664.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550721|ref|ZP_20506764.1| Single-stranded DNA-binding protein [Yersinia enterocolitica IP
10393]
gi|318603934|emb|CBY25432.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667410|gb|ADZ44054.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862806|emb|CBX72947.1| single-stranded DNA-binding protein [Yersinia enterocolitica
W22703]
gi|351777371|gb|EHB19589.1| single-stranded DNA-binding protein [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431787820|emb|CCO69804.1| Single-stranded DNA-binding protein [Yersinia enterocolitica IP
10393]
Length = 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|289209300|ref|YP_003461366.1| single-strand binding protein [Thioalkalivibrio sp. K90mix]
gi|288944931|gb|ADC72630.1| single-strand binding protein [Thioalkalivibrio sp. K90mix]
Length = 160
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P +++ +G TVT L T ++ E TE WH
Sbjct: 4 GVNKVILLGNLGADPEKRETPNGVTVTNLRLATSEQWTDKNSGEKRENTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV ++ RL + ++L GS +Y+EG ++ + + D
Sbjct: 56 RVVMFG-RLADIAAQYLSKGSQVYIEGKIQTRKWQD 90
>gi|238794655|ref|ZP_04638261.1| Single-stranded DNA-binding protein [Yersinia intermedia ATCC
29909]
gi|238726044|gb|EEQ17592.1| Single-stranded DNA-binding protein [Yersinia intermedia ATCC
29909]
Length = 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|238789903|ref|ZP_04633683.1| Single-stranded DNA-binding protein [Yersinia frederiksenii ATCC
33641]
gi|238721976|gb|EEQ13636.1| Single-stranded DNA-binding protein [Yersinia frederiksenii ATCC
33641]
Length = 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|424881579|ref|ZP_18305211.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517942|gb|EIW42674.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 169
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|355737393|gb|AES12302.1| single-stranded DNA binding protein 1 isoform 1 [Mustela putorius
furo]
Length = 148
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R E+E
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGESEAYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|381169170|ref|ZP_09878344.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Phaeospirillum molischianum DSM 120]
gi|380681784|emb|CCG43166.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Phaeospirillum molischianum DSM 120]
Length = 168
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G + ++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRTSQDGAKIVSLNIATSESWKDRASGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ L V ++L GS++Y+EG L+ + + D +G R E+ I R
Sbjct: 57 VVIFNPNLADVAERYLRKGSSVYIEGALQTRKWTDQ-SGQERYTTEVVIGR 106
>gi|188535202|ref|YP_001908999.1| ssDNA-binding protein [Erwinia tasmaniensis Et1/99]
gi|188030244|emb|CAO98131.1| Single-strand binding protein [Erwinia tasmaniensis Et1/99]
Length = 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGT 109
>gi|153808083|ref|ZP_01960751.1| hypothetical protein BACCAC_02369 [Bacteroides caccae ATCC 43185]
gi|423219251|ref|ZP_17205747.1| single-stranded DNA-binding protein [Bacteroides caccae CL03T12C61]
gi|149128986|gb|EDM20202.1| single-strand binding family protein [Bacteroides caccae ATCC
43185]
gi|392626017|gb|EIY20073.1| single-stranded DNA-binding protein [Bacteroides caccae CL03T12C61]
Length = 159
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ + IL+G VGQ P K +G V F L T R +N T+ R +WH
Sbjct: 3 VNRVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLQNGTQIPERT--EWHN 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 56 I-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 102
>gi|424890407|ref|ZP_18314006.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393172625|gb|EJC72670.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 169
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V V+ E L VV +++ G+ +Y+EG L+ + + D G R E+ ++ G+ L
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-QGQDRYSTEVVLQGFGSTLTML 114
>gi|422830189|ref|ZP_16878349.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|371606067|gb|EHN94668.1| single-stranded DNA-binding protein [Escherichia coli B093]
Length = 162
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPDIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
+V ++ +L + ++L GS IY+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQIYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|422793078|ref|ZP_16845776.1| single-strand binding protein [Escherichia coli TA007]
gi|323970418|gb|EGB65683.1| single-strand binding protein [Escherichia coli TA007]
gi|380248715|emb|CBW53109.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Hadar]
Length = 185
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V SL T +++ E + TE W
Sbjct: 5 GVNKVILIGHLGQDPDIRYFPNGGGVVANLSLATSDTWRDKQSGEMKEVTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
HRV +Y +L V ++L GS +Y+EG L+ + + D G+ R E+ + NG +
Sbjct: 57 HRVVLYG-KLAEVACEYLHKGSQVYIEGQLKTRKWFDQQNGVDRYSTEVVVGVNGVMQML 115
>gi|190891753|ref|YP_001978295.1| single-stranded DNA-binding protein [Rhizobium etli CIAT 652]
gi|417097323|ref|ZP_11959130.1| single-strand DNA binding protein [Rhizobium etli CNPAF512]
gi|190697032|gb|ACE91117.1| single-strand DNA binding protein [Rhizobium etli CIAT 652]
gi|327193327|gb|EGE60231.1| single-strand DNA binding protein [Rhizobium etli CNPAF512]
Length = 171
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ E L VV +++ G+ +Y+EG L+ + + D
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQD 91
>gi|338724330|ref|XP_003364915.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Equus caballus]
Length = 148
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R E+E
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGESEAYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|58000347|ref|YP_190159.1| single-stranded DNA-binding protein [Escherichia coli]
gi|169546540|ref|YP_001711979.1| single-stranded DNA-binding protein [Escherichia coli]
gi|419218912|ref|ZP_13761889.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8D]
gi|422820413|ref|ZP_16868620.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|432561376|ref|ZP_19798020.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE51]
gi|433201150|ref|ZP_20385012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|57903247|gb|AAW58877.1| single-stranded DNA binding protein [Escherichia coli]
gi|168831092|gb|ACA34873.1| Ssb [Escherichia coli]
gi|378055845|gb|EHW18105.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8D]
gi|385536087|gb|EIF82999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|431102903|gb|ELE07575.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE51]
gi|431714460|gb|ELJ78647.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|73540075|ref|YP_294595.1| single-stranded DNA-binding protein [Ralstonia eutropha JMP134]
gi|72117488|gb|AAZ59751.1| single-strand binding protein [Ralstonia eutropha JMP134]
Length = 181
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G P + + SG VT L T +++ E + TE WHR
Sbjct: 4 INKVILVGNLGADPETRYMPSGDAVTNLRLATTDRYKDKQSGEMKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+++ +L + ++L GS++Y+EG + + + D
Sbjct: 56 VAMFG-KLAEIAAQYLRKGSSVYIEGKIRTRKWQD 89
>gi|298386446|ref|ZP_06996002.1| single-stranded binding protein [Bacteroides sp. 1_1_14]
gi|383121116|ref|ZP_09941832.1| single-stranded DNA-binding protein [Bacteroides sp. 1_1_6]
gi|251838146|gb|EES66234.1| single-stranded DNA-binding protein [Bacteroides sp. 1_1_6]
gi|298260823|gb|EFI03691.1| single-stranded binding protein [Bacteroides sp. 1_1_14]
Length = 158
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VGQ P K +G V F L T R N T+ R +WH
Sbjct: 3 VNKVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--EWHN 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 56 I-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIFV 102
>gi|168770608|ref|ZP_02795615.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|189360566|gb|EDU78985.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
Length = 173
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQML 112
>gi|311281398|ref|YP_003943629.1| single-strand binding protein [Enterobacter cloacae SCF1]
gi|308750593|gb|ADO50345.1| single-strand binding protein [Enterobacter cloacae SCF1]
Length = 178
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|170723875|ref|YP_001751563.1| single-stranded DNA-binding protein [Pseudomonas putida W619]
gi|169761878|gb|ACA75194.1| single-strand binding protein [Pseudomonas putida W619]
Length = 183
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|440232746|ref|YP_007346539.1| single stranded DNA-binding protein [Serratia marcescens FGI94]
gi|440054451|gb|AGB84354.1| single stranded DNA-binding protein [Serratia marcescens FGI94]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANMTLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G+ +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWTDQ-SGQDRYTTEVVVNVGGSMQML 113
>gi|431805729|ref|YP_007232630.1| ssDNA-binding protein [Liberibacter crescens BT-1]
gi|430799704|gb|AGA64375.1| Single-stranded DNA-binding protein [Liberibacter crescens BT-1]
Length = 168
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I++G +G P ++ + GR + + T +R E TE WH
Sbjct: 5 INKVIIIGNLGADPEIRRTQDGRMIVSIRIATSETWRDRNTNERREKTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L + ++L GS +Y+EG L+ + + D G R EI ++
Sbjct: 57 VVIFNEGLCKIAEQYLTKGSKVYIEGQLQTRKWKDQ-NGNDRYTTEIVLQ 105
>gi|398843873|ref|ZP_10600990.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
gi|398255105|gb|EJN40145.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
Length = 183
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|302595315|ref|YP_003829030.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302310051|gb|ADL13924.1| Ssb [Escherichia coli]
Length = 214
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 40 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 91
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 92 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 147
>gi|170725005|ref|YP_001759031.1| ssDNA-binding protein [Shewanella woodyi ATCC 51908]
gi|169810352|gb|ACA84936.1| single-strand binding protein [Shewanella woodyi ATCC 51908]
Length = 225
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQPQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL V ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEVAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|425743047|ref|ZP_18861140.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
gi|445450945|ref|ZP_21444639.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
gi|425484511|gb|EKU50912.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
gi|444755694|gb|ELW80270.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
Length = 193
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P K +G ++T FS+ T ++ E + TE WHR
Sbjct: 6 VNKVILIGSLGKDPETKSFPNGGSLTQFSIATSESWVDKNTGERKEQTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 58 IVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 91
>gi|395231235|ref|ZP_10409527.1| single strand DNA-binding protein [Citrobacter sp. A1]
gi|424731189|ref|ZP_18159776.1| single-stranded dna-binding protein [Citrobacter sp. L17]
gi|394715013|gb|EJF20883.1| single strand DNA-binding protein [Citrobacter sp. A1]
gi|422894375|gb|EKU34188.1| single-stranded dna-binding protein [Citrobacter sp. L17]
Length = 174
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGVEKYTTEVVVNVGGTMQML 113
>gi|302595385|ref|YP_003829247.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302595504|ref|YP_003829122.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302310145|gb|ADL14016.1| Ssb [Escherichia coli]
gi|302310273|gb|ADL14141.1| Ssb [Escherichia coli]
Length = 210
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 40 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 91
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 92 RVVLF-GKLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 147
>gi|209694058|ref|YP_002261986.1| single-stranded DNA-binding protein [Aliivibrio salmonicida
LFI1238]
gi|208008009|emb|CAQ78146.1| single-stranded DNA-binding protein [Aliivibrio salmonicida
LFI1238]
Length = 183
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + SG V ++ T ++ E TE WH
Sbjct: 5 GINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
RV+++ +L V ++L GS +YVEG L+ + + D +G R E+ ++
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRFTTEVVVQ 105
>gi|420824602|ref|ZP_15292054.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-98]
gi|420845977|ref|ZP_15311378.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-102]
gi|391704871|gb|EIT36488.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-98]
gi|391731543|gb|EIT60233.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-102]
Length = 135
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|419145642|ref|ZP_13690355.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
gi|377986125|gb|EHV49326.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
Length = 162
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G +V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGSVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|410503007|ref|YP_006940062.1| single-stranded DNA-binding protein [Escherichia coli]
gi|417836475|ref|ZP_12482787.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|425281190|ref|ZP_18672329.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|432454204|ref|ZP_19696428.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE193]
gi|433036589|ref|ZP_20224229.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE112]
gi|340730912|gb|EGR60177.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|353233801|emb|CCE21051.1| single-stranded DNA-binding protein [Escherichia coli]
gi|408207538|gb|EKI32272.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|430970958|gb|ELC87982.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE193]
gi|431540166|gb|ELI15794.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE112]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|420620241|ref|ZP_15110560.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-15]
gi|420835242|ref|ZP_15301653.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-100]
gi|391497827|gb|EIR52647.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-15]
gi|391720422|gb|EIT50445.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-100]
Length = 132
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|388569436|ref|ZP_10155829.1| Single-stranded DNA-binding protein [Hydrogenophaga sp. PBC]
gi|388263368|gb|EIK88965.1| Single-stranded DNA-binding protein [Hydrogenophaga sp. PBC]
Length = 168
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG G+ P + L SG+ V S+ T R +R E T QWHR
Sbjct: 4 VNKVILVGNCGRDPEIRYLPSGQAVANVSVATSSRRKDRNSGEMIEET--------QWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+ Y +RL + +++ G IYVEG L+ + D
Sbjct: 56 VTFY-DRLAEIAGEYVKKGRPIYVEGRLKYGKYTD 89
>gi|419167624|ref|ZP_13712043.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7A]
gi|419183967|ref|ZP_13727532.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189605|ref|ZP_13733091.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|378019870|gb|EHV82663.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378020055|gb|EHV82825.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7A]
gi|378021436|gb|EHV84139.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|348521206|ref|XP_003448117.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Oreochromis niloticus]
Length = 147
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ I + L+G+VGQ PV ++++ VT+FSL T + + E +P + + +
Sbjct: 25 LERSINRVQLLGRVGQDPVMRQVEGRNPVTIFSLATNEMWRSGEG-EMSSPGDVSQKTT- 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHRVS++ L V +++ GS I VEG L+ + D
Sbjct: 83 -WHRVSIFKPGLRDVAYQYVKKGSRILVEGKLDYGEYVD 120
>gi|290474215|ref|YP_003467092.1| single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
gi|289173525|emb|CBJ80305.1| single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
Length = 165
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSEQWRDKQSGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG+L+ + + D G R E+ + GT +
Sbjct: 57 RVVIF-GKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-QGQDRYTTEVTVNIGGTMQML 113
>gi|157368561|ref|YP_001476550.1| single-strand binding protein [Serratia proteamaculans 568]
gi|157320325|gb|ABV39422.1| single-strand binding protein [Serratia proteamaculans 568]
Length = 168
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G + +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAIANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L + ++L GS +Y+EG+L+ + + D G+ + EI + GT +
Sbjct: 57 RVVLF-GKLAEIAGEYLRTGSQVYIEGSLQTRKWTDQ-AGVEKYTTEIVVNIGGTLQML 113
>gi|254467006|ref|ZP_05080417.1| single-strand binding protein [Rhodobacterales bacterium Y4I]
gi|206687914|gb|EDZ48396.1| single-strand binding protein [Rhodobacterales bacterium Y4I]
Length = 173
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G+ P + ++G V + T +R E TE WH V+
Sbjct: 7 KVMLIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERREKTE--------WHSVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+ E L V ++L GS +YVEG L+ + + D +G R EI ++ G+ L
Sbjct: 59 VFSEGLVRVCEQYLRKGSKVYVEGQLQTRKWQDQ-SGQDRYSTEIVLQGFGSTLTML 114
>gi|331652609|ref|ZP_08353620.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli M718]
gi|331049715|gb|EGI21781.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli M718]
Length = 192
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|325292864|ref|YP_004278728.1| ssDNA-binding protein [Agrobacterium sp. H13-3]
gi|325060717|gb|ADY64408.1| Single-stranded DNA-binding protein [Agrobacterium sp. H13-3]
Length = 191
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 19 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 70
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R E+ ++
Sbjct: 71 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEVVLQ 119
>gi|240849995|ref|YP_002971388.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267118|gb|ACS50706.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 146
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 86 LVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYP 145
L+G++G +P K + SG + FS+ T +++ + TE WH V ++
Sbjct: 3 LIGRLGANPESKTMNSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSVVIFN 54
Query: 146 ERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
L + +++L GS +Y+EG L+ + + D G R EI +
Sbjct: 55 PHLAKIALQYLNKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVL 97
>gi|237728141|ref|ZP_04558622.1| single strand DNA-binding protein [Citrobacter sp. 30_2]
gi|365101891|ref|ZP_09332495.1| single-stranded DNA-binding protein [Citrobacter freundii
4_7_47CFAA]
gi|420376092|ref|ZP_14875882.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|421847466|ref|ZP_16280603.1| single-stranded DNA-binding protein [Citrobacter freundii ATCC 8090
= MTCC 1658]
gi|226910152|gb|EEH96070.1| single strand DNA-binding protein [Citrobacter sp. 30_2]
gi|363646666|gb|EHL85903.1| single-stranded DNA-binding protein [Citrobacter freundii
4_7_47CFAA]
gi|391307128|gb|EIQ64867.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|411771120|gb|EKS54833.1| single-stranded DNA-binding protein [Citrobacter freundii ATCC 8090
= MTCC 1658]
gi|455645005|gb|EMF24095.1| single-stranded DNA-binding protein [Citrobacter freundii GTC
09479]
Length = 174
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGVEKYTTEVVVNVGGTMQML 113
>gi|194334763|ref|YP_002016623.1| single-strand binding protein [Prosthecochloris aestuarii DSM 271]
gi|194312581|gb|ACF46976.1| single-strand binding protein [Prosthecochloris aestuarii DSM 271]
Length = 166
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +G P + + SG++V F+L T N + N E +WH
Sbjct: 4 GLNKVMLIGHLGSDPELRVIPSGQSVANFTLAT----NESYKDSSGNLQE-----RTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R+ + RL + ++L G +Y+EG L+ + ++D TG R EI
Sbjct: 55 RIVAWG-RLAEICQQYLKKGRQVYIEGKLQTRSWDDTKTGDKRYATEIVC 103
>gi|423118079|ref|ZP_17105763.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5246]
gi|376402412|gb|EHT15006.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5246]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEIVVNVGGTMQML 113
>gi|260433970|ref|ZP_05787941.1| single-stranded DNA-binding protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417798|gb|EEX11057.1| single-stranded DNA-binding protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 161
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIFF 199
V+++ E L V ++L GS +YVEG L+ + + D +G R E+ ++ G+ L+
Sbjct: 57 VAIFQEGLVRVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGQDRYSTEVVLQGFGSTLVML 114
>gi|432943750|ref|XP_004083267.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Oryzias latipes]
Length = 147
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ I + L+G+VGQ PV ++++ VT+FSL T + R E E +
Sbjct: 25 LERSINRVQLLGRVGQDPVMRQVEGRNPVTIFSLATNEM---WRSGEGEVSSTGDVSQKT 81
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
WHRVSV+ L V +++ GS I VEG L+ + D
Sbjct: 82 TWHRVSVFKPGLRDVAYQYVKKGSRILVEGKLDYGEYVDK 121
>gi|157418097|ref|YP_001481169.1| single-stranded DNA-binding protein [Escherichia coli APEC O1]
gi|301329996|ref|ZP_07222684.1| single-strand binding family protein [Escherichia coli MS 78-1]
gi|88770147|gb|ABD51584.1| Ssb [Escherichia coli APEC O1]
gi|300843969|gb|EFK71729.1| single-strand binding family protein [Escherichia coli MS 78-1]
Length = 188
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|82697351|ref|NP_001032543.1| single-stranded DNA-binding protein, mitochondrial precursor [Bos
taurus]
gi|122145031|sp|Q32PB0.1|SSBP_BOVIN RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Short=Mt-SSB; Short=MtSSB; Flags: Precursor
gi|79156957|gb|AAI08190.1| Single-stranded DNA binding protein 1 [Bos taurus]
Length = 148
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ T+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPDTIFSLATNEMW---RSGENETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|420592983|ref|ZP_15086255.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-10]
gi|420635575|ref|ZP_15124404.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-25]
gi|420657425|ref|ZP_15144158.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-36]
gi|420814384|ref|ZP_15282850.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-95]
gi|391482004|gb|EIR38488.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-10]
gi|391516090|gb|EIR69017.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-25]
gi|391545317|gb|EIR95424.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-36]
gi|391700984|gb|EIT33030.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-95]
Length = 134
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|422367295|ref|ZP_16447750.1| single-strand binding family protein, partial [Escherichia coli MS
153-1]
gi|315290015|gb|EFU49401.1| single-strand binding family protein [Escherichia coli MS 153-1]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 125
>gi|260426969|ref|ZP_05780948.1| single-stranded DNA-binding protein [Citreicella sp. SE45]
gi|260421461|gb|EEX14712.1| single-stranded DNA-binding protein [Citreicella sp. SE45]
Length = 184
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGADPEVRTFQNGGKVCNLRIATSENWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L + ++L GS +Y+EG LE + + D +G R EI +R
Sbjct: 57 VAIFSEPLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEIVLR 105
>gi|160866629|gb|ABX23252.1| hypothetical protein SARI_03423 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 217
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 46 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTE--------WH 97
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G
Sbjct: 98 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIG 149
>gi|157149468|ref|YP_001451472.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|418825948|ref|ZP_13381204.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|422820209|ref|ZP_16868418.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|422831593|ref|ZP_16879733.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|432444050|ref|ZP_19686367.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|432743835|ref|ZP_19978546.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE23]
gi|157076635|gb|ABV16346.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|371601508|gb|EHN90248.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|385536256|gb|EIF83159.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|392810164|gb|EJA66185.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|430977641|gb|ELC94469.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|431280267|gb|ELF71188.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE23]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|420604195|ref|ZP_15096274.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-12]
gi|391482873|gb|EIR39288.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-12]
Length = 155
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|417262930|ref|ZP_12050391.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 2.3916]
gi|386223449|gb|EII45811.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 2.3916]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWGD--NGITRYVTEILVKTTGTMQML 112
>gi|380696167|ref|ZP_09861026.1| single-stranded DNA-binding protein [Bacteroides faecis MAJ27]
Length = 158
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VGQ P K +G V F L T R N T+ R +WH
Sbjct: 3 VNKVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--EWHN 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ V RL +V K++ G +Y+EG + + + D +G +R I EI +
Sbjct: 56 I-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYTDQ-SGAMRYITEIFV 102
>gi|333378734|ref|ZP_08470462.1| hypothetical protein HMPREF9456_02057 [Dysgonomonas mossii DSM
22836]
gi|332882998|gb|EGK03284.1| hypothetical protein HMPREF9456_02057 [Dysgonomonas mossii DSM
22836]
Length = 141
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG+ P K +G V FSL T + +N T +R +WH
Sbjct: 3 VNKVILVGHVGKDPDVKHFDNGTVVASFSLAT-----TEKGYTAQNGTTIPDR--TEWHN 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ + L V +++ GS +Y+EG + + ++D +G+ R I EI +
Sbjct: 56 IVCW-RGLAKVAEQYVKKGSQLYIEGKIRSRSYDDA-SGVKRYITEIYV 102
>gi|419304330|ref|ZP_13846255.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11D]
gi|419314610|ref|ZP_13856453.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11E]
gi|378152321|gb|EHX13421.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11E]
gi|378154992|gb|EHX16053.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11D]
Length = 177
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|415825680|ref|ZP_11513155.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|419198159|ref|ZP_13741523.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|424770912|ref|ZP_18198087.1| single-stranded DNA binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|323186519|gb|EFZ71864.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|378045826|gb|EHW08212.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|421941306|gb|EKT98709.1| single-stranded DNA binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 162
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|120613344|ref|YP_973022.1| ssDNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591808|gb|ABM35248.1| single-strand binding protein [Acidovorax citrulli AAC00-1]
Length = 187
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ RL +V ++L GS +YVEG+L + + D
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTD 89
>gi|451941924|ref|YP_007462561.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451941925|ref|YP_007462562.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901311|gb|AGF75773.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901312|gb|AGF75774.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 150
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG + F + T +++ + TE WH V
Sbjct: 4 KVTLIGRLGANPESKTMTSGAEIVNFRMATSESYTDKKTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V+ L + +++L GS +Y+EG L+ + + D G R EI +
Sbjct: 56 VFNPHLAKIALQYLNKGSKVYIEGKLQTRKWKDK-NGYDRYSTEIVL 101
>gi|293420953|ref|ZP_06661387.1| single-stranded DNA-binding protein [Escherichia coli B088]
gi|291324823|gb|EFE64239.1| single-stranded DNA-binding protein [Escherichia coli B088]
Length = 177
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|237746779|ref|ZP_04577259.1| single-stranded DNA-binding protein [Oxalobacter formigenes HOxBLS]
gi|229378130|gb|EEO28221.1| single-stranded DNA-binding protein [Oxalobacter formigenes HOxBLS]
Length = 156
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I+VG +G+ P + L SG VT ++ T ++ E + TE WHR
Sbjct: 4 INKVIIVGNLGRDPENRYLPSGEQVTGIAVATTDRWKDKATGEQKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
VS + +L + ++L GS +Y+EG L + + D G+ R EI
Sbjct: 56 VSFFG-KLAEIAGQYLKKGSQVYIEGRLRTRKYTDK-EGIDRYATEI 100
>gi|191166305|ref|ZP_03028138.1| single-stranded DNA-binding protein [Escherichia coli B7A]
gi|190903732|gb|EDV63448.1| single-stranded DNA-binding protein [Escherichia coli B7A]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGKLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|420738695|ref|ZP_15216021.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-63]
gi|391621242|gb|EIS62309.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-63]
Length = 154
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|90419649|ref|ZP_01227559.1| single-strand DNA binding protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336586|gb|EAS50327.1| single-strand DNA binding protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 173
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G P ++L SG V + T +R+ E TE WH V
Sbjct: 7 KVILVGNLGADPEIRRLNSGDAVVNLRIATSESWRDRQSGERRERTE--------WHNVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L V + L GS IY+EG L+ + + D +G R E+ +++
Sbjct: 59 IFNENLVKVAEQFLRKGSKIYIEGALQTRSWEDQ-SGQKRYTTEVVLQK 106
>gi|238020331|ref|ZP_04600757.1| hypothetical protein GCWU000324_00211 [Kingella oralis ATCC 51147]
gi|237867311|gb|EEP68317.1| hypothetical protein GCWU000324_00211 [Kingella oralis ATCC 51147]
Length = 178
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + + +G V FS+ T N+R + + TE WH ++
Sbjct: 5 KVILIGNLGRDPELRYMPNGDAVCNFSIATSESWNDRNSGQRQERTE--------WHNIT 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+Y RL V ++L GS +Y+EG ++ + + D
Sbjct: 57 LY-RRLAEVAGQYLKKGSQVYIEGKIQSRKYTD 88
>gi|121601719|ref|YP_989034.1| single-stranded DNA-binding protein [Bartonella bacilliformis
KC583]
gi|421760839|ref|ZP_16197652.1| single-stranded DNA-binding protein [Bartonella bacilliformis INS]
gi|120613896|gb|ABM44497.1| single-stranded DNA-binding protein [Bartonella bacilliformis
KC583]
gi|411174155|gb|EKS44189.1| single-stranded DNA-binding protein [Bartonella bacilliformis INS]
Length = 177
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH V
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
++ E L V ++L GS IY+EG L+ + + D
Sbjct: 59 IFNENLIKVAEQYLRKGSKIYIEGQLQTRKWQDQ 92
>gi|398796293|ref|ZP_10555906.1| single stranded DNA-binding protein [Pantoea sp. YR343]
gi|398203758|gb|EJM90575.1| single stranded DNA-binding protein [Pantoea sp. YR343]
Length = 184
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKTTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGQEKYTTEVVVNVGGTMQML 113
>gi|395651537|ref|ZP_10439387.1| single-stranded DNA-binding protein [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 171
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRFLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ ++ + +++ GS +Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVVMFG-KVAEIAGEYVRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|420683788|ref|ZP_15167965.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-48]
gi|420771202|ref|ZP_15244232.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-76]
gi|391564734|gb|EIS12912.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-48]
gi|391655608|gb|EIS92330.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-76]
Length = 133
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|419889737|ref|ZP_14410090.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|420093594|ref|ZP_14605241.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
gi|388356686|gb|EIL21376.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|394398791|gb|EJE74929.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
Length = 178
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + ++D G R I EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGATRYITEILVKTTGTMQML 113
>gi|424740791|ref|ZP_18169168.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-141]
gi|422945442|gb|EKU40395.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-141]
Length = 195
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P K +G ++T FS+ T ++ E + TE WHR
Sbjct: 6 VNKVILIGSLGKDPETKSFPNGGSLTQFSIATSDSWVDKNTGERKEQTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ V RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 58 I-VLHNRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 102
>gi|379009508|ref|YP_005267321.1| ssDNA-binding protein [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
gi|375158032|gb|AFA41098.1| ssDNA-binding protein [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
Length = 169
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ+P + + +G V +L T ++ E + TE WH
Sbjct: 5 GINKVILIGYLGQNPDIRYIPNGNAVANITLATSENWRDKNTGEIKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
R+ ++ +L + ++L GS +Y+EG+L+ + + D G + I EI + NG+
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQDKYITEIVVGINGS 109
>gi|418408177|ref|ZP_12981493.1| single-stranded DNA-binding protein [Agrobacterium tumefaciens 5A]
gi|358005091|gb|EHJ97417.1| single-stranded DNA-binding protein [Agrobacterium tumefaciens 5A]
Length = 191
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 19 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 70
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R E+ ++
Sbjct: 71 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEVVLQ 119
>gi|415835826|ref|ZP_11518390.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli RN587/1]
gi|419281304|ref|ZP_13823531.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10E]
gi|420392519|ref|ZP_14891769.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli EPEC C342-62]
gi|323191637|gb|EFZ76894.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli RN587/1]
gi|378121971|gb|EHW83418.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10E]
gi|391311777|gb|EIQ69408.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli EPEC C342-62]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|375132137|ref|YP_004994237.1| single strand DNA-binding protein - SSB [Vibrio furnissii NCTC
11218]
gi|315181311|gb|ADT88225.1| single strand DNA-binding protein - SSB [Vibrio furnissii NCTC
11218]
Length = 177
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGSDPEVRYMPSGGAVANITVATSETWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGTYLIF 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NGT +
Sbjct: 57 RVALYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGTMQML 114
>gi|84686923|ref|ZP_01014807.1| Single-strand DNA binding protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84665120|gb|EAQ11600.1| Single-strand DNA binding protein [Rhodobacterales bacterium
HTCC2654]
Length = 162
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVIIVGNLGRDPEVRTFQNGGKVVNLRIATSENWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E LG + ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLGRIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|335420361|ref|ZP_08551399.1| single-strand binding protein [Salinisphaera shabanensis E1L3A]
gi|334894720|gb|EGM32905.1| single-strand binding protein [Salinisphaera shabanensis E1L3A]
Length = 268
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI KAIL+G +G P + G VT +L T ++ E + TE WH
Sbjct: 5 GINKAILIGNLGADPETRYTAGGTAVTNVNLATSDTWRDKSSGEMQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ RL V ++L GS IYVEG ++ + + +
Sbjct: 57 RV-VFFARLAEVAGEYLRKGSKIYVEGRIQTRKYQN 91
>gi|422378457|ref|ZP_16458669.1| single-strand binding family protein [Escherichia coli MS 60-1]
gi|324010281|gb|EGB79500.1| single-strand binding family protein [Escherichia coli MS 60-1]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|331649973|ref|ZP_08351049.1| single-stranded DNA-binding protein (SSB-P1) [Escherichia coli
M605]
gi|331041230|gb|EGI13384.1| single-stranded DNA-binding protein (SSB-P1) [Escherichia coli
M605]
Length = 162
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + GT +
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMI 113
>gi|301030004|ref|ZP_07192975.1| single-strand binding family protein [Escherichia coli MS 196-1]
gi|299877219|gb|EFI85430.1| single-strand binding family protein [Escherichia coli MS 196-1]
Length = 188
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQML 125
>gi|296100686|ref|YP_003610832.1| single-strand DNA-binding protein Ssb [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|419958717|ref|ZP_14474778.1| single-stranded DNA-binding protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|295055145|gb|ADF59883.1| single-strand DNA-binding protein Ssb [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|388606385|gb|EIM35594.1| single-stranded DNA-binding protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 174
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|271501962|ref|YP_003334988.1| single-strand-binding protein [Dickeya dadantii Ech586]
gi|270345517|gb|ACZ78282.1| single-strand binding protein [Dickeya dadantii Ech586]
Length = 182
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV++Y +L + ++L GS +Y+EG L + + D G R E+ + +G+ +
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVVDISGSMQML 113
>gi|424751162|ref|ZP_18179195.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421939789|gb|EKT97298.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
Length = 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|326319444|ref|YP_004237116.1| single-strand-binding protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323376280|gb|ADX48549.1| single-strand binding protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 188
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ RL +V ++L GS +YVEG+L + + D
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTD 89
>gi|421588978|ref|ZP_16034192.1| single-stranded DNA-binding protein [Rhizobium sp. Pop5]
gi|403706191|gb|EJZ21539.1| single-stranded DNA-binding protein [Rhizobium sp. Pop5]
Length = 172
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ E L VV +++ G+ +Y+EG L+ + + D
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQD 91
>gi|384529306|ref|YP_005713394.1| single-strand binding protein [Sinorhizobium meliloti BL225C]
gi|333811482|gb|AEG04151.1| single-strand binding protein [Sinorhizobium meliloti BL225C]
Length = 174
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R E+ ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEVVLQ 105
>gi|194447081|ref|YP_002039094.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|422372658|ref|ZP_16453011.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|425135170|ref|ZP_18535972.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|432847568|ref|ZP_20079806.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE141]
gi|194358525|gb|ACF56969.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|315295576|gb|EFU54900.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|408575693|gb|EKK51345.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|431391340|gb|ELG74987.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE141]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|420667754|ref|ZP_15153433.1| single-stranded DNA-binding family protein, partial [Yersinia
pestis PY-45]
gi|391547793|gb|EIR97654.1| single-stranded DNA-binding family protein, partial [Yersinia
pestis PY-45]
Length = 130
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|420598651|ref|ZP_15091336.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-11]
gi|391483181|gb|EIR39569.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-11]
Length = 127
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|420555526|ref|ZP_15052561.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-03]
gi|391436497|gb|EIQ97448.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-03]
Length = 145
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|365968580|ref|YP_004950141.1| ssDNA-binding protein [Enterobacter cloacae EcWSU1]
gi|365747493|gb|AEW71720.1| Single-stranded DNA-binding protein [Enterobacter cloacae EcWSU1]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGAEKYTTEVVVNVGGTMQML 113
>gi|15965311|ref|NP_385664.1| single-stranded DNA-binding protein [Sinorhizobium meliloti 1021]
gi|334316193|ref|YP_004548812.1| single-strand binding protein [Sinorhizobium meliloti AK83]
gi|384536446|ref|YP_005720531.1| single-strand DNA-binding protein [Sinorhizobium meliloti SM11]
gi|407720500|ref|YP_006840162.1| single-stranded DNA-binding protein [Sinorhizobium meliloti Rm41]
gi|418401387|ref|ZP_12974916.1| single-stranded DNA-binding protein [Sinorhizobium meliloti
CCNWSX0020]
gi|433613331|ref|YP_007190129.1| single stranded DNA-binding protein (ssb) [Sinorhizobium meliloti
GR4]
gi|8478517|sp|P56898.1|SSB_RHIME RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|15074491|emb|CAC46137.1| Probable single-strand binding protein [Sinorhizobium meliloti
1021]
gi|334095187|gb|AEG53198.1| single-strand binding protein [Sinorhizobium meliloti AK83]
gi|336033338|gb|AEH79270.1| single-strand DNA-binding protein [Sinorhizobium meliloti SM11]
gi|359504633|gb|EHK77166.1| single-stranded DNA-binding protein [Sinorhizobium meliloti
CCNWSX0020]
gi|407318732|emb|CCM67336.1| single-stranded DNA-binding protein [Sinorhizobium meliloti Rm41]
gi|429551521|gb|AGA06530.1| single stranded DNA-binding protein (ssb) [Sinorhizobium meliloti
GR4]
Length = 174
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R E+ ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEVVLQ 105
>gi|410609902|ref|YP_006954109.1| Single-stranded DNA-binding protein [Escherichia coli]
gi|389596098|gb|AFK88866.1| Single-stranded DNA-binding protein [Escherichia coli]
Length = 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|405376121|ref|ZP_11030079.1| single stranded DNA-binding protein [Rhizobium sp. CF142]
gi|397327364|gb|EJJ31671.1| single stranded DNA-binding protein [Rhizobium sp. CF142]
Length = 186
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGALQTRKWQDQ-TGNDRYSTEIVLQ 105
>gi|395788518|ref|ZP_10468080.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
gi|395408158|gb|EJF74777.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
Length = 146
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G P K + SG V F + T ++ + + TE WH +
Sbjct: 4 KVMLIGYLGADPECKTMNSGTEVVNFRIATSESYTDKATNKKIDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ +
Sbjct: 56 VFNPHLAKIALQYLHKGSKVYIEGQLQTRKWQDK-NGIDRYVTEVIL 101
>gi|420587667|ref|ZP_15081472.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-09]
gi|420722487|ref|ZP_15201477.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-59]
gi|391468491|gb|EIR26362.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-09]
gi|391608277|gb|EIS50786.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-59]
Length = 154
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGT 109
>gi|320540846|ref|ZP_08040384.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
gi|320029091|gb|EFW11232.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
Length = 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GINKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ ++ V ++L GS +Y+EG+L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KVAEVAGEYLRKGSQVYIEGSLQTRRWTDQ-AGVEKYTTEVVVNIGGTMQML 113
>gi|194435945|ref|ZP_03068048.1| single-strand binding protein [Escherichia coli 101-1]
gi|251786914|ref|YP_003001218.1| ybl164 [Escherichia coli BL21(DE3)]
gi|253771493|ref|YP_003034324.1| single-strand binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163593|ref|YP_003046701.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli B str. REL606]
gi|254290343|ref|YP_003056091.1| ssDNA-binding protein [Escherichia coli BL21(DE3)]
gi|297519714|ref|ZP_06938100.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli OP50]
gi|300928470|ref|ZP_07143998.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|422788511|ref|ZP_16841247.1| single-strand binding protein [Escherichia coli H489]
gi|422792255|ref|ZP_16844956.1| single-strand binding protein [Escherichia coli TA007]
gi|442598523|ref|ZP_21016285.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|194425488|gb|EDX41472.1| single-strand binding protein [Escherichia coli 101-1]
gi|242379187|emb|CAQ33990.1| ybl164 [Escherichia coli BL21(DE3)]
gi|253322537|gb|ACT27139.1| single-strand binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975494|gb|ACT41165.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli B str. REL606]
gi|253979650|gb|ACT45320.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli BL21(DE3)]
gi|300463536|gb|EFK27029.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|323959828|gb|EGB55477.1| single-strand binding protein [Escherichia coli H489]
gi|323971121|gb|EGB66367.1| single-strand binding protein [Escherichia coli TA007]
gi|441652814|emb|CCQ01884.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 161
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGYLGQDPDIRYMPNGGAVASIALATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y++G L + + D TG R E+ + GT
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYIDGQLRTRKWTDQ-TGQERYTTEVVVHTGGT 109
>gi|190572049|ref|YP_001966291.1| Ssb [Pseudomonas sp. CT14]
gi|75707032|gb|ABA25995.1| Ssb [Pseudomonas sp. CT14]
Length = 183
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|420781998|ref|ZP_15253839.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-89]
gi|391667540|gb|EIT02864.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-89]
Length = 154
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|418937336|ref|ZP_13490987.1| single-strand binding protein [Rhizobium sp. PDO1-076]
gi|375055995|gb|EHS52204.1| single-strand binding protein [Rhizobium sp. PDO1-076]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P ++ + GR + + T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGADPEIRRTQDGRPIANLRIATSETWRDKNSGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L GST+Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGALQTRKWQD 91
>gi|359801055|ref|ZP_09303577.1| single-strand binding protein [Achromobacter arsenitoxydans SY8]
gi|359361057|gb|EHK62832.1| single-strand binding protein [Achromobacter arsenitoxydans SY8]
Length = 172
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + G + S+ T ++ E TE WHR
Sbjct: 4 VNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTWKDKASGEKREETE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V +Y RL + ++L G ++Y+EG L+ + + D TG R E+
Sbjct: 56 VVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEV 101
>gi|417164355|ref|ZP_11999160.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|417238845|ref|ZP_12036269.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|417614538|ref|ZP_12264993.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
gi|432620078|ref|ZP_19856139.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|345360384|gb|EGW92553.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
gi|386172618|gb|EIH44641.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|386213382|gb|EII23811.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|431145607|gb|ELE47223.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
Length = 186
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GVNKVILIGHLGQDPEIRYFPNGGGAVANLTLATTDTWRDKQSGEMKEHTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
HRV +Y +L + ++L GS +Y+EG L + + D G+ R E+ + NGT +
Sbjct: 57 HRVVIYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWFDQQNGVDRYSTEVVVSVNGTLQML 115
>gi|255264735|ref|ZP_05344077.1| single-stranded DNA-binding protein [Thalassiobium sp. R2A62]
gi|255107070|gb|EET49744.1| single-stranded DNA-binding protein [Thalassiobium sp. R2A62]
Length = 172
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARVAEQYLRKGSKVYLEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|84500811|ref|ZP_00999046.1| single-strand binding protein [Oceanicola batsensis HTCC2597]
gi|84390878|gb|EAQ03296.1| single-strand binding protein [Oceanicola batsensis HTCC2597]
Length = 166
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVIIVGNLGRDPEVRSFQNGGKVCNLRIATSENWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L + ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|432639083|ref|ZP_19874945.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE81]
gi|431167841|gb|ELE68096.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE81]
Length = 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|425286462|ref|ZP_18677420.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|408195196|gb|EKI20615.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
Length = 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|334123874|ref|ZP_08497888.1| single-strand binding protein [Enterobacter hormaechei ATCC 49162]
gi|333389852|gb|EGK61008.1| single-strand binding protein [Enterobacter hormaechei ATCC 49162]
Length = 176
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|146309928|ref|YP_001175002.1| single-stranded DNA-binding protein [Enterobacter sp. 638]
gi|145316804|gb|ABP58951.1| single-strand binding protein [Enterobacter sp. 638]
Length = 176
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGAEKFTTEVVVNVGGTMQML 113
>gi|193070408|ref|ZP_03051349.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|432771993|ref|ZP_20006308.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE54]
gi|192956227|gb|EDV86689.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|431324369|gb|ELG11822.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE54]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|420760985|ref|ZP_15235036.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-71]
gi|391643100|gb|EIS81300.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-71]
Length = 157
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|237745688|ref|ZP_04576168.1| single-strand binding protein [Oxalobacter formigenes HOxBLS]
gi|229377039|gb|EEO27130.1| single-strand binding protein [Oxalobacter formigenes HOxBLS]
Length = 147
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I+VG +G+ P + L SG VT ++ T ++ E + TE WHR
Sbjct: 6 INKVIIVGNLGRDPENRYLPSGEQVTGIAVATTDRWRDKATGEQKEATE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
VS + +L + ++L GS +Y+EG L + + D G+ R EI
Sbjct: 58 VSFFG-KLAEIAGQYLKKGSQVYIEGRLRTRKYTDK-EGIDRYATEI 102
>gi|420733229|ref|ZP_15211084.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-61]
gi|391620373|gb|EIS61536.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-61]
Length = 144
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|126729695|ref|ZP_01745508.1| single-strand binding protein [Sagittula stellata E-37]
gi|126709814|gb|EBA08867.1| single-strand binding protein [Sagittula stellata E-37]
Length = 172
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGERRERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L + ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|193070216|ref|ZP_03051161.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|417665125|ref|ZP_12314702.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|432658713|ref|ZP_19894394.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE111]
gi|192956535|gb|EDV86993.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|330907838|gb|EGH36363.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|431205871|gb|ELF04310.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE111]
Length = 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|427386505|ref|ZP_18882702.1| single-stranded DNA-binding protein [Bacteroides oleiciplenus YIT
12058]
gi|425725995|gb|EKU88861.1| single-stranded DNA-binding protein [Bacteroides oleiciplenus YIT
12058]
Length = 153
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VGQ P G V SL T + +N T+ +R WH
Sbjct: 3 VNKVILIGNVGQDPKVTYYDGGNCVAQLSLAT-----TEKGYTLQNGTQVPDR--TDWHN 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+ V+ RLG +V K++ G +YVEG + + ++D G+ R I EI +
Sbjct: 56 L-VFRNRLGEIVDKYVHKGDKLYVEGKIRTRSYDDQ-KGIQRYITEIFV 102
>gi|15599428|ref|NP_252922.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO1]
gi|116052269|ref|YP_788887.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152984573|ref|YP_001346254.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PA7]
gi|218889439|ref|YP_002438303.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa LESB58]
gi|254237097|ref|ZP_04930420.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa C3719]
gi|254242904|ref|ZP_04936226.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 2192]
gi|355652583|ref|ZP_09056843.1| single-stranded DNA-binding protein [Pseudomonas sp. 2_1_26]
gi|386056767|ref|YP_005973289.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa M18]
gi|418588013|ref|ZP_13152031.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P1]
gi|418589213|ref|ZP_13153141.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P2]
gi|419756671|ref|ZP_14283016.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137309|ref|ZP_14645299.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CIG1]
gi|421151790|ref|ZP_15611392.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
14886]
gi|421157777|ref|ZP_15617122.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
25324]
gi|421165643|ref|ZP_15623963.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
700888]
gi|421172483|ref|ZP_15630253.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CI27]
gi|421178616|ref|ZP_15636226.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|421518782|ref|ZP_15965456.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO579]
gi|451982913|ref|ZP_21931211.1| Single-stranded DNA-binding protein [Pseudomonas aeruginosa 18A]
gi|730833|sp|P40947.3|SSB_PSEAE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|9950448|gb|AAG07620.1|AE004840_6 single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO1]
gi|483597|emb|CAA83688.1| single-stranded DNA binding protein [Pseudomonas aeruginosa]
gi|115587490|gb|ABJ13505.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169028|gb|EAZ54539.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa C3719]
gi|126196282|gb|EAZ60345.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 2192]
gi|150959731|gb|ABR81756.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PA7]
gi|218769662|emb|CAW25422.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa LESB58]
gi|347303073|gb|AEO73187.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa M18]
gi|354823921|gb|EHF08184.1| single-stranded DNA-binding protein [Pseudomonas sp. 2_1_26]
gi|375041252|gb|EHS33962.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P1]
gi|375051975|gb|EHS44436.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P2]
gi|384396426|gb|EIE42844.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|403249955|gb|EJY63421.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CIG1]
gi|404348264|gb|EJZ74613.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO579]
gi|404526662|gb|EKA36864.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
14886]
gi|404537749|gb|EKA47332.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CI27]
gi|404541096|gb|EKA50469.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
700888]
gi|404548220|gb|EKA57184.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|404550302|gb|EKA59063.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
25324]
gi|451759382|emb|CCQ83734.1| Single-stranded DNA-binding protein [Pseudomonas aeruginosa 18A]
gi|453042411|gb|EME90155.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PA21_ST175]
Length = 165
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + + +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ RL + ++L GS +YVEG+L + + G R EI + NG +
Sbjct: 56 RV-VFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLL 112
>gi|395764357|ref|ZP_10445026.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Janthinobacterium lividum PAMC 25724]
Length = 169
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P + + SG + ++ T +R E + TE WHR+S
Sbjct: 6 KVIIVGNLGRDPEIRYMPSGDAIANIAVATSYKSKDRNTGEQKELTE--------WHRIS 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+ RL +V ++L GS++YVEG L+ + + D
Sbjct: 58 FFG-RLAEIVGQYLKKGSSVYVEGRLQTRKYTD 89
>gi|420651980|ref|ZP_15139244.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-34]
gi|420662758|ref|ZP_15148915.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-42]
gi|420678561|ref|ZP_15163266.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-47]
gi|420694774|ref|ZP_15177645.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-53]
gi|420711475|ref|ZP_15191914.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-56]
gi|420716836|ref|ZP_15196669.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-58]
gi|420754880|ref|ZP_15230186.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-66]
gi|420792890|ref|ZP_15263518.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-91]
gi|420840369|ref|ZP_15306298.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-101]
gi|391531107|gb|EIR82627.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-34]
gi|391547006|gb|EIR96944.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-42]
gi|391562577|gb|EIS10973.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-47]
gi|391577604|gb|EIS24002.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-53]
gi|391592892|gb|EIS37265.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-56]
gi|391607711|gb|EIS50279.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-58]
gi|391648974|gb|EIS86428.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-66]
gi|391672958|gb|EIT07724.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-91]
gi|391721013|gb|EIT50992.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-101]
Length = 153
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGT 109
>gi|427428076|ref|ZP_18918118.1| Single-stranded DNA-binding protein [Caenispirillum salinarum AK4]
gi|425882777|gb|EKV31456.1| Single-stranded DNA-binding protein [Caenispirillum salinarum AK4]
Length = 184
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +++G + S+ T +R+ E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRTMQNGNKLVNLSIATSETWKDRQTGEKRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ L + + L GS++Y+EG L+ + + D
Sbjct: 57 VVIFSPPLADIAERFLRKGSSVYIEGQLQTRKWQD 91
>gi|437835936|ref|ZP_20845506.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435299619|gb|ELO75745.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 176
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYL 196
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIGGVM 111
>gi|420646333|ref|ZP_15134182.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-32]
gi|391532368|gb|EIR83768.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-32]
Length = 156
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|18150888|ref|NP_542825.1| single-strand DNA-binding protein [Pseudomonas putida]
gi|37999726|sp|Q8VMM4.1|SSBW_PSEPU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|18077129|emb|CAC86765.1| putative SSB protein [Pseudomonas putida]
Length = 180
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + GT +
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|395767867|ref|ZP_10448393.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
gi|395413121|gb|EJF79599.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
Length = 148
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K + SG V F + T ++ + TE WH +
Sbjct: 4 KVMLIGRLGADPESKTMTSGAEVVNFRMATSESYTDKNTHQKVEKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+ L + +++L GS +YVEG L+ + + D
Sbjct: 56 VFNPHLAKIALQYLNKGSKVYVEGKLQTRKWQD 88
>gi|420571843|ref|ZP_15067137.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-06]
gi|420706190|ref|ZP_15187118.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-55]
gi|391451840|gb|EIR11303.1| single-stranded DNA-binding domain protein, partial [Yersinia
pestis PY-06]
gi|391588882|gb|EIS33847.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-55]
Length = 155
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|383936203|ref|ZP_09989632.1| single-strand DNA-binding protein [Rheinheimera nanhaiensis E407-8]
gi|383702765|dbj|GAB59723.1| single-strand DNA-binding protein [Rheinheimera nanhaiensis E407-8]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + + G V ++ T ++ E + TE WH
Sbjct: 4 GINKVILIGNLGTDPEVRYMPQGGAVANLTVATSESWTDKATNEKKEQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV +Y +RL + ++L GS +Y+EG L+ + + D G+ R EI
Sbjct: 56 RVVIY-QRLAEIAGEYLRKGSKVYIEGKLKTRKWQDK-DGVERYTTEI 101
>gi|304321781|ref|YP_003855424.1| single-strand binding protein [Parvularcula bermudensis HTCC2503]
gi|303300683|gb|ADM10282.1| single-strand binding protein [Parvularcula bermudensis HTCC2503]
Length = 154
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +GQ P ++ +G V + T ++ E TE WH
Sbjct: 5 VNKVILIGNLGQDPEVRQFNNGGQVCNLRIATSENWKDKNSGERREKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V +L GS +Y+EG LE + + D G R E+ +R
Sbjct: 57 VAIFSEPLVRVAQNYLKKGSKVYIEGQLETRKWQDK-DGNDRYSTEVVLR 105
>gi|427400167|ref|ZP_18891405.1| single-strand binding protein [Massilia timonae CCUG 45783]
gi|425720907|gb|EKU83822.1| single-strand binding protein [Massilia timonae CCUG 45783]
Length = 167
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P + + SG + ++ T +R E + TE WHR+S
Sbjct: 6 KVIIVGNLGRDPEIRYMPSGDAIANIAVATSYRSKDRNTGEQKELTE--------WHRIS 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+ RL +V ++L GS++YVEG L+ + + D
Sbjct: 58 FFG-RLAEIVGQYLKKGSSVYVEGRLQTRKYTD 89
>gi|425291916|ref|ZP_18682586.1| single-stranded DNA-binding protein [Escherichia coli 3006]
gi|408203824|gb|EKI28831.1| single-stranded DNA-binding protein [Escherichia coli 3006]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|88704347|ref|ZP_01102061.1| Single-strand binding protein [Congregibacter litoralis KT71]
gi|88701398|gb|EAQ98503.1| Single-strand binding protein [Congregibacter litoralis KT71]
Length = 170
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG +VT SL T +++ + TE WH
Sbjct: 5 GVNKVILVGNLGADPETRFMPSGGSVTNLSLATSETWKDKQTGLPQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ V+ RL V ++L GS +YVEG++ + + D +G R EI
Sbjct: 57 RI-VFFNRLAEVAAEYLRKGSKVYVEGSIRTRKWQDQ-SGQDRYTTEI 102
>gi|194437892|ref|ZP_03069986.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
gi|194423113|gb|EDX39106.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
Length = 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQFRTRSWED--NGITRYVTEILVKTTGTMQML 112
>gi|452126830|ref|ZP_21939413.1| single-strand binding protein [Bordetella holmesii F627]
gi|451921925|gb|EMD72070.1| single-strand binding protein [Bordetella holmesii F627]
Length = 170
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + G + SL T ++ E TE WHR
Sbjct: 4 VNKVILVGNLGRDPEVRYSPDGAAICNLSLATTSQWKDKASGERREETE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V +Y RL + ++L G ++Y+EG L+ + + D TG R EI
Sbjct: 56 VVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTEI 101
>gi|410952995|ref|XP_003983162.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Felis catus]
Length = 148
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R E+E
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGESEVYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|421178639|ref|ZP_15636247.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|404548107|gb|EKA57076.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
Length = 157
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + + +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV V+ RL + ++L GS +YVEG+L + + G R EI + NG +
Sbjct: 56 RV-VFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLL 112
>gi|306815713|ref|ZP_07449862.1| Single-stranded DNA-binding protein (SSB) (Helix-destabilizing
protein) [Escherichia coli NC101]
gi|305851375|gb|EFM51830.1| Single-stranded DNA-binding protein (SSB) (Helix-destabilizing
protein) [Escherichia coli NC101]
Length = 178
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GINKVILIGYLGQDPELRYFPNGGGAVANLTLATSESWRDKQSGEMKEQTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGT 194
HRV ++ +L + ++L GS +Y+EG L+ + + D G+ R E+ + NGT
Sbjct: 57 HRVVIF-GKLAEIAGEYLRKGSQVYIEGQLKTRKWFDQQNGVDRYATEVVVSVNGT 111
>gi|238752144|ref|ZP_04613626.1| Single-stranded DNA-binding protein [Yersinia rohdei ATCC 43380]
gi|238709617|gb|EEQ01853.1| Single-stranded DNA-binding protein [Yersinia rohdei ATCC 43380]
Length = 182
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|357974006|ref|ZP_09137977.1| single-strand binding protein [Sphingomonas sp. KC8]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 74 ENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANR 133
E + + K ILVG +G+ P + ++G V + T +R E TE
Sbjct: 10 ETNMAGSVNKVILVGNLGRDPESRSFQNGGKVVNLRIATSETWKDRATGERREKTE---- 65
Query: 134 CAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
WH V+++ E L ++L GS +Y+EG L+ + + D +G + EI ++
Sbjct: 66 ----WHSVAIFNEGLARTAEQYLRKGSKVYIEGQLQTRKWQDQ-SGADKYSTEIVLQGFN 120
Query: 194 TYLIFF 199
+ L+
Sbjct: 121 SQLVML 126
>gi|307313329|ref|ZP_07592952.1| single-strand binding protein [Escherichia coli W]
gi|378715405|ref|YP_005280296.1| single-strand binding protein [Escherichia coli KO11FL]
gi|386611789|ref|YP_006127288.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|386707726|ref|YP_006176167.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|417637166|ref|ZP_12287361.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|418832123|ref|ZP_13387067.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|306906751|gb|EFN37261.1| single-strand binding protein [Escherichia coli W]
gi|315063706|gb|ADT78032.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|323380959|gb|ADX53226.1| single-strand binding protein [Escherichia coli KO11FL]
gi|345381115|gb|EGX13001.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|383394846|gb|AFH14381.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|392798011|gb|EJA54300.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGTYLIF 198
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ GT +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQML 112
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,332,790,153
Number of Sequences: 23463169
Number of extensions: 147645661
Number of successful extensions: 349294
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 2092
Number of HSP's that attempted gapping in prelim test: 347721
Number of HSP's gapped (non-prelim): 2497
length of query: 199
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 64
effective length of database: 9,191,667,552
effective search space: 588266723328
effective search space used: 588266723328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)