BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029089
(199 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 127/189 (67%)
Query: 1 MMGVAMGMMLRSPPLVICFIIWWIVGAAYSLDLPLLRWKGSPLMAAVTIIILNGLLLQFP 60
+M +G ++ S PL + +++G AYS++LPLLRWK L+AA+ I+ + +++Q
Sbjct: 192 IMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIA 251
Query: 61 YFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGR 120
+++H Q +V GRP++F + L+FA A M F+ IA KD+PD+EGDK FG+R+ + LG+
Sbjct: 252 FYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQ 311
Query: 121 ERVFSIAVNMLLTAYGAGVVAGATSPFLPCKIVAIIGHSALAALLWRKAQTVDLTDPPSM 180
+RVF V +L AY ++ GATSPF+ K+++++GH LA LW +A++VDL+ +
Sbjct: 312 KRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEI 371
Query: 181 QSFYMFIFK 189
S YMFI+K
Sbjct: 372 TSCYMFIWK 380
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 125/188 (66%)
Query: 2 MGVAMGMMLRSPPLVICFIIWWIVGAAYSLDLPLLRWKGSPLMAAVTIIILNGLLLQFPY 61
M +G + S PL + I +I+G AYS++LP LRWK S ++AA+ I+ + +++Q +
Sbjct: 204 MSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAF 263
Query: 62 FVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGRE 121
F+H Q +V RP VF + L+FA A M F+ IA KD+PD+EGD+ FG+++ + LG++
Sbjct: 264 FLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQK 323
Query: 122 RVFSIAVNMLLTAYGAGVVAGATSPFLPCKIVAIIGHSALAALLWRKAQTVDLTDPPSMQ 181
+VF I V +L AY ++ GATS L K ++GH+ LAA+LW +++++DLT ++
Sbjct: 324 KVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSRSIDLTSKTAIT 383
Query: 182 SFYMFIFK 189
SFYMFI+K
Sbjct: 384 SFYMFIWK 391
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 122/189 (64%)
Query: 1 MMGVAMGMMLRSPPLVICFIIWWIVGAAYSLDLPLLRWKGSPLMAAVTIIILNGLLLQFP 60
++G+ ++ S PL I +V +AY++DLPLLRWK P++ A+ I +
Sbjct: 209 ILGLGFAWIVDSWPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLG 268
Query: 61 YFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGR 120
+F+H Q V RP FP+ L+F AI+ I+ IA KD+PD+EGD++FG+++L + LG
Sbjct: 269 FFLHMQTCVFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGP 328
Query: 121 ERVFSIAVNMLLTAYGAGVVAGATSPFLPCKIVAIIGHSALAALLWRKAQTVDLTDPPSM 180
+RVF I V++L YG ++ GATSP L KI+ ++GH+ LA++LW A++VDLT +
Sbjct: 329 KRVFWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLTSNVVL 388
Query: 181 QSFYMFIFK 189
SFYMFI+K
Sbjct: 389 HSFYMFIWK 397
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 118/198 (59%), Gaps = 15/198 (7%)
Query: 7 GMMLRSPPLVICFIIWWIVGA---------------AYSLDLPLLRWKGSPLMAAVTIII 51
G+++ + L + F WI G+ AYS+D+PLLRWK P +AA+ +I
Sbjct: 199 GVIISAAFLALSFGFTWITGSWPLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCMIS 258
Query: 52 LNGLLLQFPYFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAFSKDLPDVEGDKEFGL 111
L L YF H Q VL RP+ FP+ L F A M ++ +A SKD+PDVEGDKE G+
Sbjct: 259 TWALALPISYFHHMQTVVLKRPIGFPRSLGFLVAFMTFYSLGLALSKDIPDVEGDKEHGI 318
Query: 112 RTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSPFLPCKIVAIIGHSALAALLWRKAQT 171
+ + LG++R F I V+ A+G G++AGA+ KI +G++ LA++LW +A++
Sbjct: 319 DSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCSHFWTKIFTGMGNAVLASILWYQAKS 378
Query: 172 VDLTDPPSMQSFYMFIFK 189
VDL+D S SFYMFI+K
Sbjct: 379 VDLSDKASTGSFYMFIWK 396
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 25 VGAAYSLDLPLLRWKGSPLMAAVTIIILNGLLLQFPYFVHFQKYVLGRPVVFPKQLLFAA 84
+G YS+ P LR K P+ A + I + G LL F + H + LG P + + F
Sbjct: 211 LGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY-HATRAALGLPFQWSAPVAFIT 267
Query: 85 AIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGV 139
+ + +F IA +KDLPDVEGD++F + TL LG + + +LL Y + +
Sbjct: 268 SFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAI 322
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 25 VGAAYSLDLPLLRWKGSPLMAAVTIIILNGLLLQFPYFVHFQKYVLGRPVVFPKQLLFAA 84
+G YS+ P R K P+ A + I + G LL F + + + LG + + F
Sbjct: 204 LGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YATRAALGLTFQWSSPVAFIT 260
Query: 85 AIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGAT 144
+ +F IA +KDLPDVEGD+++ + TL LG + + +L+ Y A +
Sbjct: 261 CFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFLGSGLLIANYVAAIAVAFL 320
Query: 145 SPFLPCKIVAIIGHSALAALL----WRKAQTVDLTDPPSMQSFYMFIFK 189
P + V + H+ALA + W Q D ++ +Y FI+
Sbjct: 321 MPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKD--AISQYYRFIWN 367
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 91 NAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSPFLPC 150
N A KD+ DVEGD + G +TLPIILGR + +A +G VA + FLP
Sbjct: 167 NVAREIVKDIEDVEGDLKKGAKTLPIILGRRKAAYVA-----AFFG---VATVIASFLPV 218
Query: 151 KIVAIIGHSAL 161
K +G+ A+
Sbjct: 219 KAGVGVGYYAM 229
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 65 FQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVF 124
F +GR F +LF A + A KD+ D++GD++ GL+TLPI++G +
Sbjct: 151 FGAAAIGRITDFGVVVLFILAALA--TATREIIKDIEDLDGDRKEGLQTLPIVIGVTPAY 208
Query: 125 SIAVNMLLTAYGAGVV 140
+A +LL A A +V
Sbjct: 209 RVATGVLLVAVIASIV 224
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 91 NAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIA 127
N + KD+ D+EGDK G RTLPII+G ++ IA
Sbjct: 167 NVSREIMKDIEDIEGDKALGARTLPIIIGEKKAAIIA 203
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 91 NAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSPFLPC 150
N + KD+ D+EGD + G +TLPII+G+ R M+ + +G V + FLP
Sbjct: 167 NVSREIMKDIEDIEGDMKMGAKTLPIIIGKRR-----AAMISSIFG---VLTVITSFLPV 218
Query: 151 KIVAIIGHS--ALAALLWRKAQTVDLTDPPSMQS 182
K+ +G++ L + KA ++D+ P S
Sbjct: 219 KVGIGLGYAPIILVDAMILKA-SIDVVKNPESAS 251
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGRER 122
KD+ D++GD+ GLRTLPI++G R
Sbjct: 175 KDVEDIDGDRAEGLRTLPIVIGERR 199
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 91 NAAIAFSKDLPDVEGDKEFGLRTLPIILGRER 122
N + KD+ D EGDK G RTLPI++G+++
Sbjct: 167 NVSREIMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 91 NAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSPFLPC 150
N A KD+ DVEGD G +TLPII G++R + V L + FLP
Sbjct: 167 NVAREVIKDIEDVEGDMAKGAKTLPIIWGKKRAAYVGVLFALLT--------VIASFLPV 218
Query: 151 KIVAIIGHSAL 161
K +G+ A+
Sbjct: 219 KASVGVGYYAM 229
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 91 NAAIAFSKDLPDVEGDKEFGLRTLPIILGRER 122
N A KD+ D+EGD G +TLPI++GR+R
Sbjct: 167 NVAREVIKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 91 NAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAV 128
N A KD+ D+EGDK G +TLPI+ G E I V
Sbjct: 167 NVAREIFKDIEDIEGDKAQGAKTLPIVWGIESSSKIGV 204
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTA 134
KD+ D+ GDK+ G RTLPI++G ++ IA TA
Sbjct: 182 KDVEDIVGDKKDGARTLPILIGAKKASYIAAAFGFTA 218
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 40/137 (29%)
Query: 12 SPPLVICFIIWWIVGAAY-SLDLPLLRWKGSPLMAAVTIIILN--GLLLQFPYFVHFQKY 68
SP + + + VGAA + LP+L AV I LN GLL + +Y
Sbjct: 81 SPRGALAYSVVLFVGAAALAATLPVL---------AVCIAALNLAGLL-------TYTQY 124
Query: 69 VLGRPVVFPKQLLFAAAIMPIFNAAIAFS---------------------KDLPDVEGDK 107
+ GRP + + +F AA S KD+ D+ GD+
Sbjct: 125 LKGRPGAGNALVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDR 184
Query: 108 EFGLRTLPIILGRERVF 124
GLRTLP+++G +R
Sbjct: 185 AAGLRTLPVVVGHQRAL 201
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 40/137 (29%)
Query: 12 SPPLVICFIIWWIVGAAY-SLDLPLLRWKGSPLMAAVTIIILN--GLLLQFPYFVHFQKY 68
SP + + + VGAA + LP+L AV I LN GLL + +Y
Sbjct: 81 SPRGALAYSVVLFVGAAALAATLPVL---------AVCIAALNLAGLL-------TYTQY 124
Query: 69 VLGRPVVFPKQLLFAAAIMPIFNAAIAFS---------------------KDLPDVEGDK 107
+ GRP + + +F AA S KD+ D+ GD+
Sbjct: 125 LKGRPGAGNALVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKDVEDLAGDR 184
Query: 108 EFGLRTLPIILGRERVF 124
GLRTLP+++G +R
Sbjct: 185 AAGLRTLPVVVGHQRAL 201
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 37.0 bits (84), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGR------ERVFSIAVNML 131
KDL DVEGD GL+TLPI G VF+IA+ +L
Sbjct: 170 KDLEDVEGDAALGLKTLPIAYGEGVALRVATVFAIALAVL 209
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGRERVFSIAV 128
KD+ D+EGDK+ TLPII G ++ +AV
Sbjct: 169 KDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|P39582|MENA_BACSU Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase
OS=Bacillus subtilis (strain 168) GN=menA PE=3 SV=1
Length = 311
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 87 MPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAY---GAGVVAGA 143
+ I AI S ++ D+E DK+ G +TL I++G + ++ AY V+ GA
Sbjct: 193 IAILVGAINLSNNIRDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAYIWVVGLVITGA 252
Query: 144 TSPFL 148
SP+L
Sbjct: 253 ASPWL 257
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 15 LVICFIIWWI-----VGAAYSLDLPLLRWKGSPLMAAVTIIILNGLLLQFPYFVHFQKYV 69
L+ C + WI + + L L + K +PL+ +T+ + GL F + + +
Sbjct: 96 LISCLVDTWIPCTIVIFSDIILYLYAYKLKSTPLIGNLTVGFMTGLCFIFAGYTFNEGLI 155
Query: 70 LGRPVVFPKQLLFAAAIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILG 119
+ + L F A IM A +KD+ D+EGD G +T PI+ G
Sbjct: 156 IYESYL----LAFFALIM---TTAREITKDIEDMEGDMAEGAKTFPILYG 198
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 75 VFPKQLLFAAAIMPIFNAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVF 124
V P +LF +++ I+ I KD D+EGDK+ G+ +LPI G++ ++
Sbjct: 158 VMPVVILFLCSLLSIWGREIV--KDFEDMEGDKKEGVISLPIKYGKKSLY 205
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 14/102 (13%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSPFLPCKIVAIIG 157
KD D+EGD+ G TL I +G + IA TA+ +A + P+L + G
Sbjct: 174 KDAEDIEGDRAHGADTLAIRIGVRKTALIA--FACTAF---AIAASAVPYLWWGGWYLAG 228
Query: 158 HSALA-ALLWRKAQTVDLTDPPSMQSFYMFIFKASGSTLVLQ 198
+A+ +L+ +++ TDP S+ KA+GST +L+
Sbjct: 229 IAAVDLVILFAAGRSLGCTDPVSL--------KATGSTTLLK 262
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 24/106 (22%)
Query: 37 RWKGSPLMAAVTIIILNGLLLQFPYFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAF 96
++KG P + +++ L+G + F F+ V P+ L ++P+F AI F
Sbjct: 121 KFKGIPFLGNLSVAYLSGSIFLFGGFL-----------VGPESFL---VMLPLF--AITF 164
Query: 97 S--------KDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTA 134
KD D+EGD+ G RTLP+ +G + +AV +L A
Sbjct: 165 FGTLARELLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVIFVLFA 210
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 93 AIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNML-LTAYG-AGVVAGATSPFLPC 150
IA D VEGD+ GL++LP+ G E I V + +T AG + + P+
Sbjct: 279 GIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYAL 338
Query: 151 KIVAII 156
+VA+I
Sbjct: 339 ALVALI 344
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 90 FNAAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSP--- 146
F + F K + D+EGDK G+ TL + LG + + IA +L G++ TSP
Sbjct: 166 FTLSREFVKGIEDIEGDKRNGVNTLAVKLGEKSTWIIAKIIL------GILI-FTSPLPY 218
Query: 147 FLPCKIVAIIGHSALAALL 165
FL ++ +IG AL LL
Sbjct: 219 FLGFNVIYLIGILALDVLL 237
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 59 FPYFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNA-AIAFSKDLPDVEGDKEFGLRTLPII 117
P+F G P F + A++ F A I D +EGD++ G+R+LP++
Sbjct: 159 LPWFTGAAVLSAGAPSFF----IVTVALLYAFGAHGIMTLNDFKALEGDRQHGVRSLPVM 214
Query: 118 LGRERVFSIAVNMLLTA 134
LG E +A ++ A
Sbjct: 215 LGPEVAAKLACTVMAMA 231
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 36 LRWKGSPLMAAVTIIILNGLLLQFP-YFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAI 94
+R K +P++ V + L G + F F + V + L AAI + A
Sbjct: 120 VRLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLV---------RNLSLAAITFLATIAR 170
Query: 95 AFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSPF 147
KD DV+GD G RTLP+I+G + + A G VA + PF
Sbjct: 171 ELLKDAEDVDGDAAGGARTLPMIVGVRK-----TGIFAFACACGAVAASLLPF 218
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTA 134
KD D++GDK G+ +LPI G+ +F +A+ LL +
Sbjct: 176 KDYEDLDGDKSEGVISLPIKYGKNSIF-VAIGFLLCS 211
>sp|O07753|Y1877_MYCTU Uncharacterized MFS-type transporter Rv1877/MT1926 OS=Mycobacterium
tuberculosis GN=Rv1877 PE=3 SV=1
Length = 687
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 110 GLRTLPIILGRERVFSIAVNMLLTAYGAGVVAGATSPFLPCKIVAIIGHSALAALLWRKA 169
GLRTLP+++G +L+ + G GV+ G T + KI + G + +A +
Sbjct: 319 GLRTLPMVIG----------LLIASTGTGVLVGRTGRY---KIFPVAGMALMAVAFLLMS 365
Query: 170 QTVDLTDPPSMQSFYMFIFKAS 191
Q + T PP +QS Y+ + A
Sbjct: 366 QMDEWT-PPLLQSLYLVVLGAG 386
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 18/102 (17%)
Query: 37 RWKGSPLMAAVTIIILNGLLLQFPYFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAF 96
R KG P+ + I L G ++ G P + A + I +A
Sbjct: 120 RLKGLPVAGNIAISYLTG-----------TTFLFGGLAASPSSI---TAFLSILSALATL 165
Query: 97 S----KDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTA 134
S KD+ D+ GD G +TLP +G+ + F +A +L+ A
Sbjct: 166 SREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLASLVLIVA 207
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 37 RWKGSPLMAAVTIIILNGLLLQFPYFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAF 96
R K L+ +TI L GL FV F VLG V L F A +M + +
Sbjct: 118 RLKKRCLVGNITISFLTGL-----SFV-FGGIVLGE-VRASILLGFYAFLMTMAREIV-- 168
Query: 97 SKDLPDVEGDKEFGLRTLPIILG 119
KD+ DVEGD+ G TLPI G
Sbjct: 169 -KDMEDVEGDRAEGATTLPITHG 190
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 93 AIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNML 131
IA D VEGD+ GL++LP+ G E I V +
Sbjct: 268 GIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAI 306
>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2
Length = 3898
Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 126 IAVNMLLTAYGAGVVAGATSPFLPCKIVAIIGHSALAALLWRKAQTVDLTDPPSMQSFYM 185
I V LL YGA + A S P + A +GH + LL + + D+T+ + +M
Sbjct: 411 IKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGASPDVTNIRGETALHM 470
>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4
Length = 3957
Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 126 IAVNMLLTAYGAGVVAGATSPFLPCKIVAIIGHSALAALLWRKAQTVDLTDPPSMQSFYM 185
I V LL YGA + A S P + A +GH + LL + + D+T+ + +M
Sbjct: 411 IKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGASPDVTNIRGETALHM 470
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 39 KGSPLMAAVTIIILNGLLLQFPYFVHFQKYVLGRPVVFPKQLLFAAAIMPIFNAAIAFSK 98
KG+PL+ ++I L G + F + G + +LF A + I A K
Sbjct: 139 KGTPLLGNLSIGYLTGSVFLF------GASIFGFGGIKALSVLFLLAALAI--TAREIVK 190
Query: 99 DLPDVEGDKEFGLRTLPIILGRERVFSIAV 128
D+ D+EGD G TLP+ +G ++ +AV
Sbjct: 191 DIEDMEGDSLEGADTLPLRIGAKKAGYLAV 220
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 93 AIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNML 131
IA D +EGD+ GL++LP+ G E I V +
Sbjct: 270 GIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICVGAI 308
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGRERVFSIAVNML 131
D +EGD++ G+++LP + G E IA ++
Sbjct: 199 NDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVM 232
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 98 KDLPDVEGDKEFGLRTLPIILGRER 122
KD+ D+EGDK G TLP+ +G ++
Sbjct: 190 KDIEDMEGDKMEGADTLPLRVGAKK 214
>sp|B0KC36|FTHS_THEP3 Formate--tetrahydrofolate ligase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=fhs PE=3
SV=1
Length = 555
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 83 AAAIMPIFN-AAIAFSKDLPDVEGDKEFGLRTLPIILGRERVFSIAVNMLLTAYGAGVVA 141
A+A+ I N + F K +P V ++ L P +LGR R F I V L + GAG +
Sbjct: 464 ASALKDIANLERLGFDK-MPIVVAKTQYSLSDDPKLLGRPRGFKITVRELRVSRGAGFIV 522
Query: 142 GATSPFL 148
T +
Sbjct: 523 ALTGDIM 529
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.144 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,595,535
Number of Sequences: 539616
Number of extensions: 2811479
Number of successful extensions: 7278
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 7237
Number of HSP's gapped (non-prelim): 53
length of query: 199
length of database: 191,569,459
effective HSP length: 112
effective length of query: 87
effective length of database: 131,132,467
effective search space: 11408524629
effective search space used: 11408524629
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)