BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029094
(199 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FRR1|PRA1E_ARATH PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1
Length = 209
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 132/182 (72%), Gaps = 4/182 (2%)
Query: 13 TTTTNPTTTTSLSFFSRA--ESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYFR 70
++T+N T +LS ++ +S+ T RPWRE + SALSLP Y++A++ + N SYFR
Sbjct: 21 SSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFR 80
Query: 71 VNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARD--DPVVVFNQTLDDKFVLGC 128
NYA+ +L I+FL L++HP+SMI FIVVF+ W+ YF+RD D +V+ + +DDK VL
Sbjct: 81 GNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVL 140
Query: 129 LTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDEESAAEGGLVSVLGGT 188
L+LVTVLAL+ TDVG NVLV LI+G+++VG H +FR TDDLFLDEESA GGLVS G
Sbjct: 141 LSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGN 200
Query: 189 QP 190
+P
Sbjct: 201 RP 202
>sp|Q9C889|PR1F2_ARATH PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1
Length = 189
Score = 173 bits (438), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 127/184 (69%), Gaps = 7/184 (3%)
Query: 7 TNYGSATTTTNPTTTTSLSFFSRAE----SLTATRRPWREFFNTSALSLPADYNDAISRA 62
TNYG+ T+++P+ L + SRA+ S ATRRPW+ F+ +++LP + DAISR
Sbjct: 2 TNYGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRI 61
Query: 63 RRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDD 122
+ N YFR NYA+ +LFILFLSLL+HP S+IV ++ V W+F YF RD+P+VVF +DD
Sbjct: 62 KTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDD 121
Query: 123 KFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDEESAA---EG 179
+ VL L+++TV+ L+LT +N+L L+ VLV +HA+ R +D+LFLDEE+AA
Sbjct: 122 RTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEAS 181
Query: 180 GLVS 183
GL+S
Sbjct: 182 GLMS 185
>sp|Q9LIC7|PR1F4_ARATH PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1
Length = 188
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 8 NYGSATTTTNPTTTTSLSFFSRAESLT----ATRRPWREFFNTSALSLPADYNDAISRAR 63
N TT+++ + + SRA+ ATRR WR F+ + LP +D SR +
Sbjct: 3 NNDEITTSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIK 62
Query: 64 RNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDDK 123
N +YFR NYA+V+L ++F SL+WHP S+IVF + LW+F YF RD P+ VF +DD+
Sbjct: 63 TNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDR 122
Query: 124 FVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDEESA 176
VL L+++T++ L+LT+ N++ L+ G VLV +HA R TDDLFLDEE+A
Sbjct: 123 AVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAA 175
>sp|O80915|PR1B4_ARATH PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1
Length = 220
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 35 ATRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSMIV 94
+ RRPW E + SALS P +DA R R+N SYF+VNY V I+ SL+ HP S++
Sbjct: 52 SKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVF 111
Query: 95 FIVVFVLWLFFYFAR--DDPVVVFNQTLDDKFVLGCLTLVTVLALILTDVGTNVLVGLIV 152
+ + WLF Y R D P+V+F +T D+ LGCL L ++ + LTDVG+ ++ +++
Sbjct: 112 LLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMI 171
Query: 153 GVVLVGLHASFRATDDLFLDEESAAEGGLVSVLGG 187
GV L+ H +FRA +DLFLDE+ A G +S LGG
Sbjct: 172 GVALICAHGAFRAPEDLFLDEQEPAATGFLSFLGG 206
>sp|Q9LIC6|PR1F3_ARATH PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1
Length = 188
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
Query: 7 TNYGSATTTTNPTTTTSLSFFSRAESLT----ATRRPWREFFNTSALSLPADYNDAISRA 62
TNYG+ T+++ + + SRA+ ATRR WR F+ ++ LP +DA +R
Sbjct: 2 TNYGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRI 61
Query: 63 RRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDD 122
+ N +YFR+NYA+V+L ++F SL+WHP S+IVF V+ V+W+F YF RD+P+ +F +DD
Sbjct: 62 KTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDD 121
Query: 123 KFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDEESA 176
+ VL L+++TV+ L+LT+ N++ L+ G VLV +H+ R T+DLFLDEE+A
Sbjct: 122 RTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175
>sp|Q9M012|PR1B5_ARATH PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1
Length = 223
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 38 RPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIV 97
RPW E + SA + P ++A +R R+N+SYFRVNY ++ IL SLL HP S+I+ +
Sbjct: 55 RPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLC 114
Query: 98 VFVLWLFFYFAR--DDPVVVFNQTLDDKFVLGCLTLVTVLALILTDVGTNVLVGLIVGVV 155
+ WLF Y R D P+++F ++ + LG L L T+ + T VG+ ++ L++G+
Sbjct: 115 LAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIA 174
Query: 156 LVGLHASFRATDDLFLDEESAAEGGLVSVLG 186
+ +H +FRA DDLFLDE+ A G +S +G
Sbjct: 175 TICVHGAFRAPDDLFLDEQDHAASGFLSFIG 205
>sp|Q9LYN0|PR1B1_ARATH PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1
Length = 209
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 7/187 (3%)
Query: 6 PTNYGSATTTTNPTTTTSL-SFFSRAESLT----ATRRPWREFFNTSALSLPADYNDAIS 60
P A + P T + +FFSR + + RRPW E + S+++ P DA+S
Sbjct: 8 PVTNQQAVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALS 67
Query: 61 RARRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFAR--DDPVVVFNQ 118
R R+N +YF+VNY ++ +L SL HP+S++V I + W+F Y R D P+VVF +
Sbjct: 68 RIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGR 127
Query: 119 TLDDKFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDEESAAE 178
T D+ L L L T++ + +T VG+ + L++GV +V +H +F DDLFLDE+ A
Sbjct: 128 TFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQEPAN 187
Query: 179 GGLVSVL 185
GL+S L
Sbjct: 188 AGLLSFL 194
>sp|Q9SIY7|PR1B2_ARATH PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1
Length = 213
Score = 123 bits (309), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 5 PPTNYGSATTTTNPTTTTSLSFFSRAESLTA-----TRRPWREFFNTSALSLPADYNDAI 59
P TN +AT + P + + F S + RRPW E + S+ + P D+
Sbjct: 9 PVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSF 68
Query: 60 SRARRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFAR--DDPVVVFN 117
SR R+N +YF+VNY+ ++ +L SLL HP S++V + + W+F Y R D P+V+F
Sbjct: 69 SRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFG 128
Query: 118 QTLDDKFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDEESAA 177
++ D+ L L L T++ + +T VG+ + L +G+ +V LH +FR DDLFLDE+ A
Sbjct: 129 RSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPA 188
Query: 178 EGGLVSVLGG 187
GL+S +G
Sbjct: 189 NAGLLSFIGN 198
>sp|Q9FLB6|PR1B3_ARATH PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1
Length = 217
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 113/197 (57%), Gaps = 12/197 (6%)
Query: 1 MSLKPPT-----NYGSATTTTNPTTTTSL-SFFSRAESLT----ATRRPWREFFNTSALS 50
M PPT + G + + P +T + +F SR S + RRPW E + SA+S
Sbjct: 1 MMANPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAIS 60
Query: 51 LPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFAR- 109
P DA SR RRN YF+VNY ++ +L LSLL HP S++V + +F W+F Y R
Sbjct: 61 RPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRP 120
Query: 110 -DDPVVVFNQTLDDKFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDD 168
D P+VV +T D+ LG L ++T++ + LT VG+ + L++G +V LH +FR +D
Sbjct: 121 SDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPED 180
Query: 169 LFLDEESAAEGGLVSVL 185
LFLD++ A GL+S L
Sbjct: 181 LFLDDQEPANTGLLSFL 197
>sp|P93829|PRA1D_ARATH PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1
Length = 182
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 102/170 (60%)
Query: 30 AESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHP 89
A+S+T RPW +F + SA S P+ DA +R +N ++FR+NY++++ +L L+L+ P
Sbjct: 13 AQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRP 72
Query: 90 VSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDDKFVLGCLTLVTVLALILTDVGTNVLVG 149
++++ FI V + W F YFAR++P+ +F T+DD V L +++ +L+ T V L
Sbjct: 73 IAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTT 132
Query: 150 LIVGVVLVGLHASFRATDDLFLDEESAAEGGLVSVLGGTQPVRLTGYTRI 199
+ GV+++ LHA+ R TDDL D+ + G ++S GG Y+ I
Sbjct: 133 VGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSGI 182
>sp|Q9LYQ4|PR1B6_ARATH PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1
Length = 216
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 34 TATRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSMI 93
+A RPW E + SA S P ++A SR R+N SYFR NY ++ +L SLL HP ++
Sbjct: 41 SADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALF 100
Query: 94 VFIVVFVLWLFFYFAR--DDPVVVFNQTLDDKFVLGCLTLVTVLALILTDVGTNVLVGLI 151
+ + WLF YF R D P+V+ +T D LG L L TV+ + +T VG+ ++ L
Sbjct: 101 LLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLA 160
Query: 152 VGVVLVGLHASFRATDDLFLDEESAAEGGL 181
VG++ V +H +FRA +DLFL+E+ A GL
Sbjct: 161 VGIMGVAIHGAFRAPEDLFLEEQEAIGSGL 190
>sp|Q9FZ63|PR1F1_ARATH PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1
Length = 180
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 7 TNYGSATTTTNPTTTTSLSFFSRA-----ESLTATRRPWREFFNTSALSLPADYNDAISR 61
T YG+ ++N L + +R S ATRRPW++ + + + P I+R
Sbjct: 2 TTYGTNQKSSN-DLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITR 60
Query: 62 ARRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLD 121
R N YF+ NY +V+LF +FLSL+W+P S++V + + WLF YF RD+P+ VF++ +D
Sbjct: 61 IRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREID 120
Query: 122 DKFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFL-DEESA 176
+ VL ++++T+ L LTD N+ V ++ G + V HA+ R T+DLF DEE++
Sbjct: 121 HRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETS 176
>sp|Q9FH16|PR1G2_ARATH PRA1 family protein G2 OS=Arabidopsis thaliana GN=PRA1G2 PE=2 SV=1
Length = 186
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 104/180 (57%), Gaps = 4/180 (2%)
Query: 4 KPPTNYGSATTTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRAR 63
PP Y S TN + S+ + A S + RPW E + SLP ++ + R++
Sbjct: 5 PPPITYISIPLPTNDVVSRSIHNLTTAIS---SHRPWSELIFSGDFSLPESFSSLLLRSK 61
Query: 64 RNASYFRVNYAVVMLFILFLSLL-WHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDD 122
N +YF VNY +++ +L+ PV++IV + LWL F+F R+DP+++++ + D
Sbjct: 62 TNFNYFFVNYTIIVSTCAAFALITASPVALIVVGAIIALWLIFHFFREDPLILWSFQVGD 121
Query: 123 KFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDEESAAEGGLV 182
+ VL L L +V A+ T+ N+ VG+ VG++L +HA FR +D+LFL+E+ A GGL+
Sbjct: 122 RTVLLFLVLASVWAIWFTNSAVNLAVGVSVGLLLCIIHAVFRNSDELFLEEDDAINGGLI 181
>sp|Q9ZWD1|PR1G1_ARATH PRA1 family protein G1 OS=Arabidopsis thaliana GN=PRA1G1 PE=2 SV=1
Length = 187
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 86/152 (56%)
Query: 23 SLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILF 82
SLS + S+++ R W EF ++ P+ ++ A+SR + N +F VNY ++ +
Sbjct: 24 SLSVHNLIASVSSYRPWWSEFLAFGSIDRPSSFSPAVSRVKLNLHHFAVNYVLLTAASIT 83
Query: 83 LSLLWHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDDKFVLGCLTLVTVLALILTDV 142
L L+ P++++ +WL YF RD P+V++ + + D+ ++ L L ++ AL +
Sbjct: 84 LFLIGDPMALVTVASFVAMWLLLYFYRDHPLVLYGRHISDRVIVFGLILGSLWALWFINS 143
Query: 143 GTNVLVGLIVGVVLVGLHASFRATDDLFLDEE 174
+++G++ V+L +HA R +DDLF+ E+
Sbjct: 144 LQCLILGVVTSVLLCLVHAIIRNSDDLFVQEK 175
>sp|Q1G3K7|PRA1C_ARATH PRA1 family protein C OS=Arabidopsis thaliana GN=PRA1C PE=2 SV=1
Length = 127
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 69 FRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDDKFVLGC 128
FR NY V+ + +F+S+LW PV + VF+++ V WL+ Y ++P V+F +DD ++
Sbjct: 3 FRTNYIVIFIVSIFISMLWQPVHLSVFVILIVAWLYVYSRDNEPWVIFGSVIDDSTLVLV 62
Query: 129 LTLVTVLALILTDVGTNVLVGLIVGVVLVGLHA-SFRATDDLFL---DEESAA 177
L ++T+ +LTDV +++G++ G+ +V +H R T+ LF+ DEE A
Sbjct: 63 LLVLTIGIFLLTDVSRGIVIGVLAGLPVVLVHGMCRRNTEMLFVLEDDEEKVA 115
>sp|Q8HY39|PRAF1_CANFA Prenylated Rab acceptor protein 1 OS=Canis familiaris GN=RABAC1
PE=2 SV=1
Length = 185
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
Query: 10 GSATTTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYF 69
G + TT P S + R E AT RPW F + S P + + R RN Y+
Sbjct: 15 GLSATTLLPKLIPSGAGRERLERRRATIRPWSSFVDQRRFSRPRNLGELCQRLVRNVEYY 74
Query: 70 RVNYAVVMLFILFLSLLWHPVSMIVFIVVF-VLWLFFYFARDDPVVVFNQTLDDKFVLGC 128
+ NY V L ++ ++ P+ ++ V F ++ + V+F + +
Sbjct: 75 QSNYVFVFLGLILYCVVTSPMLLVALAVFFGACYILYLRTLQSKFVLFGREVSPAHQYAL 134
Query: 129 LTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDE 173
V+ L G+ V L +V++G HA+F + + +E
Sbjct: 135 AGGVSFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQMEAVDGEE 179
>sp|Q9Z0S9|PRAF1_MOUSE Prenylated Rab acceptor protein 1 OS=Mus musculus GN=Rabac1 PE=1
SV=1
Length = 185
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 1/165 (0%)
Query: 4 KPPTNYGSATTTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRAR 63
K G + TT P S + E AT RPW F + S P + + R
Sbjct: 9 KDAEGEGLSATTLLPKLIPSGAGREWLERRRATIRPWGTFVDQQRFSRPRNVGELCQRLV 68
Query: 64 RNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVF-VLWLFFYFARDDPVVVFNQTLDD 122
RN Y++ NY V L ++ ++ P+ ++ V F ++ + +V+F + +
Sbjct: 69 RNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAVFFGACYILYLRTLQSKLVLFGREVSP 128
Query: 123 KFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATD 167
V+ L G+ V L +VL+G HA+F +
Sbjct: 129 AHQYALAGGVSFPFFWLAGAGSAVFWVLGATLVLIGSHAAFHQME 173
>sp|O35394|PRAF1_RAT Prenylated Rab acceptor protein 1 OS=Rattus norvegicus GN=Rabac1
PE=1 SV=1
Length = 185
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 1/159 (0%)
Query: 10 GSATTTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYF 69
G + TT P S + E AT RPW F + S P + + R RN Y+
Sbjct: 15 GLSATTLLPKLIPSGAGREWLERRRATIRPWGTFVDQQRFSRPRNVGELCQRLVRNVEYY 74
Query: 70 RVNYAVVMLFILFLSLLWHPVSMIVFIVVF-VLWLFFYFARDDPVVVFNQTLDDKFVLGC 128
+ NY V L ++ ++ P+ ++ V F ++ + +V+F + +
Sbjct: 75 QSNYVFVFLGLILYCVVTSPMLLVALAVFFGACYILYLRTLQSKLVLFGREVSPAHQYAL 134
Query: 129 LTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATD 167
V+ L G+ V L +VL+G HA+F +
Sbjct: 135 AGGVSFPFFWLAGAGSAVFWVLGATLVLIGSHAAFHQIE 173
>sp|Q9UI14|PRAF1_HUMAN Prenylated Rab acceptor protein 1 OS=Homo sapiens GN=RABAC1 PE=1
SV=1
Length = 185
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 1/171 (0%)
Query: 4 KPPTNYGSATTTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRAR 63
K G + TT P S + E AT RPW F + S P + + R
Sbjct: 9 KDAEAEGLSGTTLLPKLIPSGAGREWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLV 68
Query: 64 RNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVF-VLWLFFYFARDDPVVVFNQTLDD 122
RN Y++ NY V L ++ ++ P+ ++ V F ++ + + +V+F + +
Sbjct: 69 RNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAVFFGACYILYLRTLESKLVLFGREVSP 128
Query: 123 KFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDE 173
++ L G+ V L +V++G HA+F + + +E
Sbjct: 129 AHQYALAGGISFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179
>sp|Q52NJ0|PRAF1_PIG Prenylated Rab acceptor protein 1 OS=Sus scrofa GN=RABAC1 PE=2 SV=1
Length = 185
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 1/171 (0%)
Query: 4 KPPTNYGSATTTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRAR 63
K G + TT P S + E AT RPW F + S P + + R
Sbjct: 9 KDAEAEGLSATTLLPKLIPSGAGREWLERRRATIRPWGSFVDQRRFSRPRNLGELCQRLV 68
Query: 64 RNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVF-VLWLFFYFARDDPVVVFNQTLDD 122
RN Y++ NY V L ++ ++ P+ ++ V F ++ + V+F + +
Sbjct: 69 RNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAVFFGACYILYLRTLQSKFVLFGREVSP 128
Query: 123 KFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDE 173
V+ L G+ V L +V++G HA+F + + +E
Sbjct: 129 AHQYALAGGVSFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179
>sp|Q8LFP1|PRA1H_ARATH PRA1 family protein H OS=Arabidopsis thaliana GN=PRA1H PE=2 SV=1
Length = 241
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 9/156 (5%)
Query: 11 SATTTTNPTTTTSLSFFSRAESLTATRRPWREFF--NTSALSLPADYNDAISRARRNASY 68
S+ T NP + S A+ + PW F N + S P+ A R N
Sbjct: 81 SSLLTINPFSKLS------ADDFSGDTTPWTTGFIGNCDSYSFPSSSQQARMRVHENIKR 134
Query: 69 FRVNYAVVMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARDDPVVVFNQTLDDKFVLGC 128
F NYA + + +L P++++ + LW F + D + ++ K +G
Sbjct: 135 FARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKFDRHPSM-RKLSIGI 193
Query: 129 LTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFR 164
T + L +V + L + ++ LHA FR
Sbjct: 194 GQCATAVLLTFLNVQMALFSALAISYSVMILHAGFR 229
>sp|Q1RMH4|PRAF1_BOVIN Prenylated Rab acceptor protein 1 OS=Bos taurus GN=RABAC1 PE=2 SV=1
Length = 185
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 1/171 (0%)
Query: 4 KPPTNYGSATTTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRAR 63
K G + T P S + E AT R W F + S P + + R
Sbjct: 9 KDAEAEGLSAATLLPKLIPSGAGREWLERRRATIRSWGSFVDQRRFSRPRNLGELCQRLV 68
Query: 64 RNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVF-VLWLFFYFARDDPVVVFNQTLDD 122
RN Y++ NY V L ++ + P+ ++ V F ++ + V+F + +
Sbjct: 69 RNVEYYQSNYVFVFLGLILYCVATSPMLLVALAVFFGACYILYLRTLQSKFVLFGREVSP 128
Query: 123 KFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDDLFLDE 173
V+ L G+ V L +V++G HA+F + + +E
Sbjct: 129 AHQYALAGGVSFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179
>sp|P53633|PRA1_YEAST Prenylated Rab acceptor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YIP3 PE=1 SV=2
Length = 176
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 15 TTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNYA 74
T N + S F +S AT R +EFFN +S P ++ + SR N YF NY
Sbjct: 14 TQNFSMENIKSEFQSLQSKLATLRTPQEFFNFKKISKPQNFGEVQSRVAYNLKYFSSNYG 73
Query: 75 VVM 77
+++
Sbjct: 74 LII 76
>sp|Q8W115|PR1A3_ARATH PRA1 family protein A3 OS=Arabidopsis thaliana GN=PRA1A3 PE=2
SV=1
Length = 209
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 29 RAESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWH 88
R +A+ R EFF S + P ++ +SR + N Y+R NY ++ +F+L L+L+
Sbjct: 16 REVEWSASPRSLAEFF--SRFAFPRSFSKWMSRLKCNLYYYRTNYFILFVFVLGLALITR 73
Query: 89 PVSMI 93
P++++
Sbjct: 74 PLAIL 78
>sp|Q8GWC3|PR1A2_ARATH PRA1 family protein A2 OS=Arabidopsis thaliana GN=PRA1A2 PE=2
SV=1
Length = 209
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 42 EFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSMI 93
EFF S + P ++ SR + N Y+R NY ++++F+L L+L+ P++++
Sbjct: 29 EFF--SRFAFPRSFSKWKSRLKCNLYYYRTNYFILVIFVLGLALVTRPLALV 78
>sp|Q8SW90|Y2E7_ENCCU Uncharacterized membrane protein ECU02_1470 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU02_1470 PE=1 SV=1
Length = 156
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 41 REFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSMIVFIVVFV 100
R+FFN + +P + NDA R N F+ +Y + M I L + + + +I+ I +
Sbjct: 26 RDFFNIGRICVPQNLNDAKRRVFANLDRFKFHY-LAMTAIFTLIYVLYRLELIILIGIVA 84
Query: 101 LWLFFYFAR 109
++ Y R
Sbjct: 85 AGVYAYRVR 93
>sp|Q54NS7|PRAFB_DICDI PRA1 family protein 2 OS=Dictyostelium discoideum GN=prafB PE=3
SV=2
Length = 158
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 38 RPWREFFNTSALSLPADYNDAISRARRNASYFRVNY----AVVMLFILFLSL 85
+PW +F S+P N AI+R N +++ NY AVV+L LF ++
Sbjct: 10 QPWNDFIEWGRYSIPGSQN-AITRMEDNLNFYSGNYIAIVAVVLLITLFTNM 60
>sp|Q9UUN5|PRA1_SCHPO PRA1-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPCC306.02c PE=2 SV=1
Length = 171
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 14 TTTNPTTTTSLSFFSRAESLTATRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNY 73
+ T + T S + SRA+ L+ + EF + +S P ++++A SR N S F NY
Sbjct: 7 SITKVSETFSEIYASRAQYLSGFKSVG-EFLDVRRISRPRNFSEAQSRISFNFSRFSSNY 65
Query: 74 AVVMLFILFLSLLWHP 89
++ ++ +L+ +P
Sbjct: 66 LAIIAMLVIYALIRNP 81
>sp|Q54XK1|PRAFA_DICDI PRA1 family protein 1 OS=Dictyostelium discoideum GN=prafA PE=3
SV=1
Length = 235
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 52/141 (36%), Gaps = 26/141 (18%)
Query: 36 TRRPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSMIVF 95
T R WR F + + D SR + N YF+ NY ILFL F
Sbjct: 99 TTRDWRSFVGSRQQYGLPNIKDTTSRIKENVVYFQSNY-----LILFL----------CF 143
Query: 96 IVVFVLWLFFYFARDD-----PVVVFNQT----LDDKFVLGCLTLVTVLALILTDVGTNV 146
V F++ FY V + N T + K G +++ L+
Sbjct: 144 SVFFIITNPFYLLLLGVLLFISVYLHNSTTLTDIQRKIAYGIQAFLSIYFLLYAGSSIFW 203
Query: 147 LVGLIVGVVLVGLHASFRATD 167
LVG + L LHASF + +
Sbjct: 204 LVGATCCITL--LHASFHSPN 222
>sp|A1JMG4|Y1530_YERE8 Uncharacterized MFS-type transporter YE1530 OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=YE1530 PE=3 SV=1
Length = 382
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 111 DPVVVFNQTLDDKFVLGCLTLVTVLALILTDVGTNVLVGLIVGVVLVGLHASFRATDD 168
D +V NQ L + +G LT T+ +L++ N+L +I GV LV L R D
Sbjct: 317 DKLVAMNQALLMSYTIGSLTGPTMTSLLMQRYSDNLLFIMIAGVALVYLMMLLRKPDQ 374
>sp|P32528|DUR1_YEAST Urea amidolyase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DUR1,2 PE=1 SV=2
Length = 1835
Score = 31.2 bits (69), Expect = 4.1, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 109 RDDPVVVFNQTLDDKFVLGCLTLVTVLALILTD-------VGTNVLVGL-----IVGVVL 156
RDD + NQ L++ V GC+T + L I+T V TN+L + + L
Sbjct: 1025 RDDAISKLNQALEETKVYGCITNIDYLKSIITSDFFAKAKVSTNILNSYQYEPTAIEITL 1084
Query: 157 VGLHASFR 164
G H S +
Sbjct: 1085 PGAHTSIQ 1092
>sp|P34256|YKA4_CAEEL Uncharacterized protein B0303.4 OS=Caenorhabditis elegans
GN=B0303.4 PE=4 SV=2
Length = 616
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 76 VMLFILFLSLLWHPVSMIVFIVVFVLWLFFYFARD-----DPVVVFNQTLDDKFVLGCLT 130
V +F+ + ++ V +FI+VF+ ++F ++R DPV V N+ ++++ V +
Sbjct: 555 VSIFLYYFPDVFDRVGFSIFIIVFLYFVFVVYSRQRRRQPDPVEVQNEMMENQIVQETIR 614
Query: 131 LV 132
L+
Sbjct: 615 LL 616
>sp|Q9LZM7|PR1A1_ARATH PRA1 family protein A1 OS=Arabidopsis thaliana GN=PRA1A1 PE=2
SV=1
Length = 209
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 38 RPWREFFNTSALSLPADYNDAISRARRNASYFRVNYAVVMLFILFLSLLWHPVSM 92
RP EFF S ++P SR + N Y+R NY ++++ IL L +L P+++
Sbjct: 25 RPPSEFF--SRFTVPKSVPKWDSRLKCNLYYYRTNYFIMIVVILGLGVLTRPLAI 77
>sp|C5FYX2|VPS10_ARTOC Vacuolar protein sorting/targeting protein 10 OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=VPS10 PE=3 SV=2
Length = 1465
Score = 30.8 bits (68), Expect = 5.8, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 16/66 (24%)
Query: 148 VGLIVGVVLVGLHASFRATDDLFLDEESAA----------------EGGLVSVLGGTQPV 191
VGLI+GV VG H + RA D F+ ++ +G ++ ++ +P
Sbjct: 1060 VGLIIGVGNVGSHLTARAESDTFMSRDAGITWHQIRKGRYQWEFGDQGSIIVIVAEGKPT 1119
Query: 192 RLTGYT 197
++ YT
Sbjct: 1120 KVLSYT 1125
>sp|Q8R5J9|PRAF3_MOUSE PRA1 family protein 3 OS=Mus musculus GN=Arl6ip5 PE=1 SV=2
Length = 188
Score = 30.4 bits (67), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 35 ATRRPWREFFNTSALSLPADYNDAI---SRARRNASYFRVNYAVVMLFILFLSLLWHPVS 91
A R W +FF S D+ D +R N Y++ NY VV ++ + P +
Sbjct: 6 APLRAWDDFFPGSDRFARPDFRDISKWNNRVVSNLLYYQTNYLVVAAMMISVVGFLSPFN 65
Query: 92 MIV--FIVVFVLWLFFYFARDDPVVVFNQTLDDKFVLGCLTLVTVLALILTDVGTNVLV- 148
MI+ IVV V F + A + ++ + + ++ + +V + + L + V+V
Sbjct: 66 MILGGVIVVLVFMGFVWAAHNKDIL---RRMKKQYPTAFVMVVMLASYFLISMFGGVMVF 122
Query: 149 --GLIVGVVLVGLHASFRATDDLFLDEESAAEG 179
G+ + ++L+ +HAS R +L E+ EG
Sbjct: 123 VFGITLPLLLMFIHASLRLR-NLKNKLENKMEG 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,131,459
Number of Sequences: 539616
Number of extensions: 2518034
Number of successful extensions: 13486
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 13429
Number of HSP's gapped (non-prelim): 66
length of query: 199
length of database: 191,569,459
effective HSP length: 112
effective length of query: 87
effective length of database: 131,132,467
effective search space: 11408524629
effective search space used: 11408524629
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)