Query 029096
Match_columns 199
No_of_seqs 175 out of 743
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 11:54:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029096.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029096hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 7.2E-55 2.5E-59 365.0 22.0 178 10-187 12-189 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 5.1E-37 1.8E-41 254.1 7.8 158 17-179 6-175 (179)
3 1v70_A Probable antibiotics sy 99.0 1.7E-09 5.9E-14 76.6 7.7 63 95-162 41-104 (105)
4 3h8u_A Uncharacterized conserv 99.0 2.2E-09 7.6E-14 80.2 8.3 81 74-168 41-123 (125)
5 1x82_A Glucose-6-phosphate iso 98.9 6.4E-09 2.2E-13 85.0 10.5 68 95-162 86-156 (190)
6 3fjs_A Uncharacterized protein 98.9 3.8E-09 1.3E-13 79.2 6.6 63 94-161 48-110 (114)
7 2b8m_A Hypothetical protein MJ 98.9 5.4E-09 1.9E-13 77.3 7.2 66 95-164 40-105 (117)
8 4e2g_A Cupin 2 conserved barre 98.8 7.4E-09 2.5E-13 77.2 7.2 72 74-161 43-114 (126)
9 1fi2_A Oxalate oxidase, germin 98.8 1.8E-08 6.3E-13 82.6 10.0 104 43-164 51-159 (201)
10 2oa2_A BH2720 protein; 1017534 98.8 2.9E-08 9.9E-13 77.1 10.1 68 95-162 56-125 (148)
11 1vj2_A Novel manganese-contain 98.8 1.1E-08 3.7E-13 77.4 7.4 63 95-162 61-123 (126)
12 2gu9_A Tetracenomycin polyketi 98.8 1.3E-08 4.3E-13 73.5 7.4 62 95-161 34-98 (113)
13 4i4a_A Similar to unknown prot 98.8 1.7E-08 6E-13 75.4 8.1 61 94-159 46-106 (128)
14 3d82_A Cupin 2, conserved barr 98.8 8.3E-09 2.8E-13 73.6 6.0 51 94-149 41-92 (102)
15 2o8q_A Hypothetical protein; c 98.8 1.4E-08 4.8E-13 76.7 7.5 80 69-161 38-118 (134)
16 2pfw_A Cupin 2, conserved barr 98.8 1.8E-08 6.2E-13 73.9 7.5 60 95-161 47-106 (116)
17 1yhf_A Hypothetical protein SP 98.8 1.8E-08 6.1E-13 73.8 7.3 58 95-159 53-110 (115)
18 2ozj_A Cupin 2, conserved barr 98.8 1.1E-08 3.8E-13 75.3 6.2 51 95-150 51-101 (114)
19 1yfu_A 3-hydroxyanthranilate-3 98.8 2.5E-08 8.6E-13 82.2 8.8 56 93-149 46-101 (174)
20 1lr5_A Auxin binding protein 1 98.8 2.9E-08 9.8E-13 78.0 8.7 69 95-163 54-127 (163)
21 3ht1_A REMF protein; cupin fol 98.8 1.9E-08 6.4E-13 76.2 7.4 64 94-162 51-116 (145)
22 4b29_A Dimethylsulfoniopropion 98.7 2E-08 6.7E-13 85.4 7.7 66 93-163 143-208 (217)
23 3ibm_A Cupin 2, conserved barr 98.7 1.1E-07 3.8E-12 76.1 11.6 64 94-162 68-132 (167)
24 3l2h_A Putative sugar phosphat 98.7 6.6E-08 2.3E-12 75.7 9.6 78 75-166 49-128 (162)
25 2q30_A Uncharacterized protein 98.7 3.3E-08 1.1E-12 71.3 7.2 63 94-162 45-109 (110)
26 2i45_A Hypothetical protein; n 98.7 1.3E-08 4.5E-13 74.2 5.1 50 95-148 40-90 (107)
27 2f4p_A Hypothetical protein TM 98.7 4.5E-08 1.5E-12 76.4 8.3 63 95-161 61-123 (147)
28 3kgz_A Cupin 2 conserved barre 98.7 4.2E-08 1.4E-12 78.2 7.8 65 95-164 57-121 (156)
29 3d0j_A Uncharacterized protein 98.7 3.6E-08 1.2E-12 78.8 7.2 91 91-186 38-134 (140)
30 3jzv_A Uncharacterized protein 98.7 1.1E-07 3.9E-12 76.5 9.6 64 94-162 65-128 (166)
31 2vqa_A SLL1358 protein, MNCA; 98.7 1.1E-07 3.6E-12 83.3 10.0 79 73-161 53-132 (361)
32 3lwc_A Uncharacterized protein 98.6 8.1E-08 2.8E-12 73.3 7.6 76 73-167 41-116 (119)
33 2opk_A Hypothetical protein; p 98.6 8.8E-08 3E-12 71.7 7.2 62 96-160 47-109 (112)
34 3i7d_A Sugar phosphate isomera 98.6 1E-07 3.6E-12 75.8 7.9 76 75-164 46-124 (163)
35 2vqa_A SLL1358 protein, MNCA; 98.6 1.6E-07 5.6E-12 82.1 9.8 67 95-161 247-314 (361)
36 1o5u_A Novel thermotoga mariti 98.6 1.7E-07 5.8E-12 69.8 8.2 50 95-149 43-92 (101)
37 1zvf_A 3-hydroxyanthranilate 3 98.6 2E-07 6.7E-12 77.0 9.0 57 93-149 45-104 (176)
38 1j58_A YVRK protein; cupin, de 98.6 1.2E-07 4E-12 84.0 8.3 77 74-161 81-157 (385)
39 1dgw_A Canavalin; duplicated s 98.6 2.5E-07 8.6E-12 74.8 9.1 75 74-160 43-119 (178)
40 3rns_A Cupin 2 conserved barre 98.6 1.3E-07 4.4E-12 78.8 7.6 72 73-161 38-109 (227)
41 4h7l_A Uncharacterized protein 98.6 1.4E-07 4.9E-12 76.4 7.4 59 95-162 58-119 (157)
42 2bnm_A Epoxidase; oxidoreducta 98.5 2.8E-07 9.4E-12 73.9 8.8 61 97-158 135-196 (198)
43 1o4t_A Putative oxalate decarb 98.5 3E-07 1E-11 70.2 8.3 57 95-156 70-127 (133)
44 2fqp_A Hypothetical protein BP 98.5 1.4E-07 4.8E-12 68.1 6.0 58 95-156 31-90 (97)
45 3h7j_A Bacilysin biosynthesis 98.5 2.5E-07 8.5E-12 77.7 8.3 63 95-162 159-221 (243)
46 3cew_A Uncharacterized cupin p 98.5 2.3E-07 7.8E-12 69.4 7.2 81 65-161 20-102 (125)
47 4e2q_A Ureidoglycine aminohydr 98.5 5.7E-07 2E-11 78.2 10.2 73 74-161 188-260 (266)
48 1fxz_A Glycinin G1; proglycini 98.5 7.9E-07 2.7E-11 82.8 11.8 71 93-164 349-422 (476)
49 1y9q_A Transcriptional regulat 98.5 3.9E-07 1.3E-11 73.0 8.5 59 96-160 120-178 (192)
50 2d5f_A Glycinin A3B4 subunit; 98.5 5.1E-07 1.7E-11 84.4 10.4 73 94-167 379-454 (493)
51 1j58_A YVRK protein; cupin, de 98.5 6.5E-07 2.2E-11 79.2 10.1 67 95-161 270-337 (385)
52 3rns_A Cupin 2 conserved barre 98.5 4.6E-07 1.6E-11 75.4 8.5 59 94-158 165-223 (227)
53 2cav_A Protein (canavalin); vi 98.5 4.5E-07 1.6E-11 83.7 9.2 78 73-161 87-165 (445)
54 3c3v_A Arachin ARAH3 isoform; 98.5 8.3E-07 2.8E-11 83.5 11.0 72 93-165 383-457 (510)
55 1sef_A Conserved hypothetical 98.5 7.9E-07 2.7E-11 75.9 9.8 59 95-158 195-255 (274)
56 1juh_A Quercetin 2,3-dioxygena 98.4 7E-07 2.4E-11 79.3 8.9 64 97-161 65-129 (350)
57 1y3t_A Hypothetical protein YX 98.4 9E-07 3.1E-11 76.0 8.9 62 95-162 231-293 (337)
58 2xlg_A SLL1785 protein, CUCA; 98.4 2.6E-07 8.8E-12 78.9 5.2 65 95-159 56-137 (239)
59 1fxz_A Glycinin G1; proglycini 98.4 6.8E-07 2.3E-11 83.2 8.4 80 70-160 47-148 (476)
60 3nw4_A Gentisate 1,2-dioxygena 98.4 5.7E-07 1.9E-11 81.5 7.6 58 95-157 116-174 (368)
61 1uij_A Beta subunit of beta co 98.4 8.6E-07 2.9E-11 81.0 8.7 77 73-160 50-127 (416)
62 2qnk_A 3-hydroxyanthranilate 3 98.4 1.1E-06 3.9E-11 77.2 8.8 54 95-150 44-98 (286)
63 2ea7_A 7S globulin-1; beta bar 98.4 1.3E-06 4.3E-11 80.4 9.2 77 73-160 62-139 (434)
64 1y3t_A Hypothetical protein YX 98.3 9.7E-07 3.3E-11 75.8 7.9 61 95-161 59-120 (337)
65 3qac_A 11S globulin SEED stora 98.3 9.6E-07 3.3E-11 82.2 8.2 81 70-161 49-166 (465)
66 2d5f_A Glycinin A3B4 subunit; 98.3 1.2E-06 4.1E-11 81.9 8.8 81 69-161 43-149 (493)
67 2e9q_A 11S globulin subunit be 98.3 1E-06 3.5E-11 81.7 8.3 81 70-161 62-163 (459)
68 3fz3_A Prunin; TREE NUT allerg 98.3 2.7E-06 9.4E-11 80.3 11.2 73 93-166 405-480 (531)
69 3bcw_A Uncharacterized protein 98.3 6.8E-07 2.3E-11 68.9 5.8 66 70-150 47-112 (123)
70 1sfn_A Conserved hypothetical 98.3 3.1E-06 1.1E-10 71.3 10.3 73 74-161 167-239 (246)
71 1rc6_A Hypothetical protein YL 98.3 2.4E-06 8.3E-11 72.2 9.3 57 95-156 192-250 (261)
72 4axo_A EUTQ, ethanolamine util 98.3 2E-06 6.9E-11 69.0 8.2 60 100-167 82-141 (151)
73 2d40_A Z3393, putative gentisa 98.3 9.2E-07 3.1E-11 78.9 6.9 60 94-158 112-172 (354)
74 3c3v_A Arachin ARAH3 isoform; 98.3 1.6E-06 5.6E-11 81.5 8.6 82 69-161 46-162 (510)
75 3bu7_A Gentisate 1,2-dioxygena 98.3 2.1E-06 7.3E-11 78.3 8.8 60 94-158 306-366 (394)
76 2phl_A Phaseolin; plant SEED s 98.3 2.3E-06 7.8E-11 78.1 8.7 78 71-160 52-136 (397)
77 3h7j_A Bacilysin biosynthesis 98.3 1.7E-06 5.9E-11 72.5 7.1 60 94-158 46-106 (243)
78 3bu7_A Gentisate 1,2-dioxygena 98.2 4.7E-06 1.6E-10 76.0 10.0 58 94-156 135-194 (394)
79 2arc_A ARAC, arabinose operon 98.2 2.8E-06 9.6E-11 64.7 7.3 49 96-149 32-80 (164)
80 2pyt_A Ethanolamine utilizatio 98.2 2.2E-06 7.7E-11 66.5 6.8 56 96-159 70-125 (133)
81 1uij_A Beta subunit of beta co 98.2 5.7E-06 1.9E-10 75.6 10.4 68 93-162 260-342 (416)
82 2phl_A Phaseolin; plant SEED s 98.2 7E-06 2.4E-10 74.9 10.5 68 93-162 250-325 (397)
83 3ksc_A LEGA class, prolegumin; 98.2 3.4E-06 1.2E-10 79.1 8.4 82 69-161 44-146 (496)
84 1juh_A Quercetin 2,3-dioxygena 98.2 4E-06 1.4E-10 74.4 8.2 62 94-160 264-325 (350)
85 2e9q_A 11S globulin subunit be 98.2 7.4E-06 2.5E-10 76.0 10.0 85 76-161 306-402 (459)
86 3ksc_A LEGA class, prolegumin; 98.2 1.6E-05 5.3E-10 74.6 12.3 87 77-164 343-442 (496)
87 1sq4_A GLXB, glyoxylate-induce 98.2 3.9E-06 1.3E-10 72.3 7.6 56 96-156 84-139 (278)
88 2vpv_A Protein MIF2, MIF2P; nu 98.2 3.6E-06 1.2E-10 68.5 6.8 52 96-152 104-155 (166)
89 3es1_A Cupin 2, conserved barr 98.2 3.4E-06 1.2E-10 68.9 6.7 74 74-162 81-154 (172)
90 3kgl_A Cruciferin; 11S SEED gl 98.1 9.8E-06 3.3E-10 75.5 10.1 85 76-161 307-403 (466)
91 3s7i_A Allergen ARA H 1, clone 98.1 8.7E-06 3E-10 74.7 9.3 66 94-161 275-366 (418)
92 3qac_A 11S globulin SEED stora 98.1 1.6E-05 5.5E-10 74.0 10.4 88 76-164 307-407 (465)
93 2ea7_A 7S globulin-1; beta bar 98.1 1.3E-05 4.4E-10 73.7 9.4 68 93-162 277-358 (434)
94 3s7i_A Allergen ARA H 1, clone 98.1 1.2E-05 4.2E-10 73.7 9.1 75 69-156 42-118 (418)
95 2o1q_A Putative acetyl/propion 98.0 3.7E-06 1.3E-10 65.9 4.4 80 73-166 45-124 (145)
96 2d40_A Z3393, putative gentisa 98.0 7.9E-06 2.7E-10 72.8 7.0 49 95-148 281-329 (354)
97 3lag_A Uncharacterized protein 98.0 3.2E-06 1.1E-10 62.1 3.0 62 95-158 30-92 (98)
98 1sq4_A GLXB, glyoxylate-induce 98.0 1.5E-05 5E-10 68.7 7.4 69 74-156 193-261 (278)
99 2cav_A Protein (canavalin); vi 97.9 4.5E-05 1.5E-09 70.3 10.5 68 93-162 292-371 (445)
100 3kgl_A Cruciferin; 11S SEED gl 97.9 2.2E-05 7.5E-10 73.1 8.4 80 70-161 42-181 (466)
101 2ozi_A Hypothetical protein RP 97.8 1.8E-05 6E-10 58.5 5.0 62 95-158 30-92 (98)
102 1rc6_A Hypothetical protein YL 97.8 8.2E-05 2.8E-09 62.7 8.6 53 101-158 80-132 (261)
103 2q1z_B Anti-sigma factor CHRR, 97.8 7.7E-05 2.6E-09 61.3 8.0 64 75-157 128-191 (195)
104 3es4_A Uncharacterized protein 97.7 9E-05 3.1E-09 57.1 7.7 70 73-159 43-112 (116)
105 3nw4_A Gentisate 1,2-dioxygena 97.7 3.8E-05 1.3E-09 69.6 6.4 51 95-150 292-342 (368)
106 2y0o_A Probable D-lyxose ketol 97.7 6.5E-05 2.2E-09 61.8 6.8 59 93-151 64-145 (175)
107 1sef_A Conserved hypothetical 97.7 0.0001 3.6E-09 62.7 7.7 52 100-156 82-133 (274)
108 3gbg_A TCP pilus virulence reg 97.7 0.0001 3.6E-09 61.3 7.4 63 75-148 10-72 (276)
109 3ebr_A Uncharacterized RMLC-li 97.6 0.00011 3.9E-09 58.8 7.2 105 72-195 42-154 (159)
110 3fz3_A Prunin; TREE NUT allerg 97.5 0.00017 5.8E-09 68.2 7.9 85 59-159 40-206 (531)
111 4e2q_A Ureidoglycine aminohydr 97.5 0.00014 4.7E-09 63.2 6.6 78 75-166 73-151 (266)
112 3st7_A Capsular polysaccharide 97.4 0.00054 1.9E-08 59.0 9.1 64 95-158 285-352 (369)
113 3myx_A Uncharacterized protein 97.2 0.0019 6.5E-08 55.2 9.8 47 100-151 63-109 (238)
114 1sfn_A Conserved hypothetical 97.2 0.00035 1.2E-08 58.7 5.1 42 102-148 68-109 (246)
115 3cjx_A Protein of unknown func 97.1 0.002 7E-08 51.9 8.6 61 73-149 44-104 (165)
116 3bal_A Acetylacetone-cleaving 97.1 0.00078 2.7E-08 54.2 5.8 80 68-162 43-122 (153)
117 3o14_A Anti-ecfsigma factor, C 97.1 0.00085 2.9E-08 56.5 6.3 64 75-158 46-109 (223)
118 3myx_A Uncharacterized protein 96.3 0.0087 3E-07 51.1 7.2 46 100-149 184-229 (238)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.3 0.015 5.1E-07 45.8 7.9 56 95-151 48-105 (141)
120 1yud_A Hypothetical protein SO 95.8 0.026 9E-07 46.0 7.2 88 68-167 45-139 (170)
121 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 95.6 0.036 1.2E-06 45.5 7.6 56 95-151 61-128 (185)
122 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 95.5 0.032 1.1E-06 46.3 7.1 57 95-151 73-135 (197)
123 2ixk_A DTDP-4-dehydrorhamnose 95.4 0.048 1.7E-06 44.6 7.7 57 95-151 62-129 (184)
124 1dzr_A DTDP-4-dehydrorhamnose 95.4 0.045 1.5E-06 44.8 7.4 56 95-151 60-128 (183)
125 3kmh_A D-lyxose isomerase; cup 95.2 0.029 1E-06 48.2 6.0 58 93-150 117-197 (246)
126 3ejk_A DTDP sugar isomerase; Y 95.2 0.16 5.4E-06 41.3 10.0 56 95-150 66-131 (174)
127 3ryk_A DTDP-4-dehydrorhamnose 95.0 0.075 2.6E-06 44.4 7.8 57 95-151 83-151 (205)
128 3bb6_A Uncharacterized protein 94.8 0.31 1E-05 38.0 10.1 74 90-163 22-103 (127)
129 1oi6_A PCZA361.16; epimerase, 94.7 0.089 3.1E-06 43.8 7.5 57 95-151 60-128 (205)
130 3eqe_A Putative cystein deoxyg 94.7 0.19 6.5E-06 40.5 9.2 71 93-163 80-155 (171)
131 2c0z_A NOVW; isomerase, epimer 94.7 0.09 3.1E-06 44.3 7.4 57 95-151 68-136 (216)
132 2gm6_A Cysteine dioxygenase ty 94.5 0.24 8.2E-06 40.9 9.4 72 92-163 89-169 (208)
133 3o14_A Anti-ecfsigma factor, C 94.2 0.048 1.6E-06 45.7 4.8 60 73-152 147-206 (223)
134 1upi_A DTDP-4-dehydrorhamnose 94.2 0.14 4.9E-06 43.3 7.7 57 95-151 79-147 (225)
135 1eyb_A Homogentisate 1,2-dioxy 94.1 0.083 2.8E-06 49.3 6.5 44 101-149 177-220 (471)
136 4gjz_A Lysine-specific demethy 93.7 0.24 8.3E-06 39.4 7.9 51 98-148 140-224 (235)
137 1wlt_A 176AA long hypothetical 93.0 0.37 1.3E-05 39.9 8.0 56 95-151 78-146 (196)
138 2xdv_A MYC-induced nuclear ant 91.9 0.53 1.8E-05 43.1 8.4 55 95-149 153-223 (442)
139 2qnk_A 3-hydroxyanthranilate 3 91.9 0.37 1.2E-05 42.3 6.9 52 103-161 227-278 (286)
140 3d8c_A Hypoxia-inducible facto 91.5 0.73 2.5E-05 40.5 8.5 66 96-161 197-298 (349)
141 4diq_A Lysine-specific demethy 90.9 2.2 7.5E-05 39.9 11.5 66 95-160 178-263 (489)
142 2qjv_A Uncharacterized IOLB-li 89.9 0.24 8.1E-06 43.1 3.8 49 95-147 168-233 (270)
143 1vrb_A Putative asparaginyl hy 89.3 1.2 4.2E-05 39.1 8.0 54 95-148 154-241 (342)
144 1dgw_X Canavalin; duplicated s 89.2 0.52 1.8E-05 33.4 4.6 40 73-122 37-77 (79)
145 2vec_A YHAK, pirin-like protei 88.6 1.9 6.6E-05 36.7 8.5 63 95-161 77-143 (256)
146 4hn1_A Putative 3-epimerase in 88.5 3 0.0001 34.6 9.4 57 95-151 57-125 (201)
147 3al5_A HTYW5, JMJC domain-cont 88.0 1.7 5.7E-05 37.9 8.0 64 98-163 183-277 (338)
148 3eln_A Cysteine dioxygenase ty 85.2 7.5 0.00026 31.7 10.0 72 93-164 81-162 (200)
149 1tq5_A Protein YHHW; bicupin, 84.1 3.5 0.00012 34.7 7.7 62 95-160 54-119 (242)
150 3uss_A Putative uncharacterize 82.4 11 0.00038 31.1 10.0 72 92-163 83-163 (211)
151 1zx5_A Mannosephosphate isomer 82.1 0.61 2.1E-05 40.5 2.3 46 103-148 118-181 (300)
152 2rg4_A Uncharacterized protein 81.5 2.2 7.5E-05 35.0 5.3 56 92-147 113-191 (216)
153 1qwr_A Mannose-6-phosphate iso 80.6 0.74 2.5E-05 40.2 2.3 23 125-147 158-180 (319)
154 3dl3_A Tellurite resistance pr 80.4 7.8 0.00027 29.6 7.7 71 92-163 26-101 (119)
155 3k2o_A Bifunctional arginine d 80.2 2.1 7.2E-05 37.7 5.1 27 124-150 255-281 (336)
156 2wfp_A Mannose-6-phosphate iso 77.3 1.3 4.4E-05 39.9 2.9 23 126-148 241-263 (394)
157 2oyz_A UPF0345 protein VPA0057 76.9 7 0.00024 28.8 6.2 45 102-149 41-85 (94)
158 2qdr_A Uncharacterized protein 72.6 2.5 8.5E-05 37.1 3.3 52 96-158 105-159 (303)
159 3kv4_A PHD finger protein 8; e 72.4 4.4 0.00015 37.3 5.1 29 122-150 298-326 (447)
160 3pua_A GRC5, PHD finger protei 71.4 2.2 7.6E-05 38.8 2.8 27 123-149 242-268 (392)
161 2xxz_A Lysine-specific demethy 71.4 2.3 7.7E-05 37.9 2.8 23 124-146 278-300 (332)
162 2qdr_A Uncharacterized protein 71.2 6.4 0.00022 34.5 5.5 30 99-144 235-264 (303)
163 1qwr_A Mannose-6-phosphate iso 70.7 16 0.00055 31.6 8.2 36 102-142 269-304 (319)
164 3k3o_A PHF8, PHD finger protei 70.6 3.6 0.00012 37.1 4.0 28 122-149 214-241 (371)
165 1xe7_A YML079WP, hypothetical 70.3 14 0.00048 30.6 7.3 54 95-148 93-152 (203)
166 2yu1_A JMJC domain-containing 68.9 5.2 0.00018 36.9 4.8 28 123-150 264-291 (451)
167 1pmi_A PMI, phosphomannose iso 68.7 2.7 9.4E-05 38.4 2.9 23 126-148 267-289 (440)
168 3pur_A Lysine-specific demethy 67.6 4.3 0.00015 38.3 4.0 29 122-150 363-391 (528)
169 1ywk_A 4-deoxy-L-threo-5-hexos 67.5 6.5 0.00022 34.4 4.9 49 95-144 196-249 (289)
170 1xru_A 4-deoxy-L-threo-5-hexos 67.5 15 0.0005 32.0 7.1 56 95-152 196-256 (282)
171 1dgw_Y Canavalin; duplicated s 66.5 16 0.00054 26.6 6.1 36 125-162 6-41 (93)
172 3kv5_D JMJC domain-containing 65.4 5.1 0.00018 37.1 4.0 53 97-149 281-360 (488)
173 1zx5_A Mannosephosphate isomer 65.2 15 0.00051 31.6 6.7 49 104-160 250-298 (300)
174 2pqq_A Putative transcriptiona 65.1 21 0.00071 25.1 6.6 59 102-160 46-108 (149)
175 3loi_A Putative uncharacterize 65.1 26 0.00089 28.2 7.7 54 94-147 65-126 (172)
176 3eo6_A Protein of unknown func 64.5 10 0.00035 28.5 4.8 49 97-148 48-97 (106)
177 2p17_A Pirin-like protein; GK1 63.9 30 0.001 29.4 8.3 62 95-160 52-116 (277)
178 3kv9_A JMJC domain-containing 63.5 6 0.00021 35.9 4.0 28 122-149 242-269 (397)
179 3hqx_A UPF0345 protein aciad03 61.6 22 0.00075 26.9 6.2 50 98-150 52-102 (111)
180 2fmy_A COOA, carbon monoxide o 60.3 41 0.0014 25.7 8.0 53 102-159 45-98 (220)
181 3mdp_A Cyclic nucleotide-bindi 60.3 18 0.0006 25.4 5.4 57 102-158 47-110 (142)
182 3tht_A Alkylated DNA repair pr 59.7 9 0.00031 33.9 4.4 38 107-144 228-265 (345)
183 3dn7_A Cyclic nucleotide bindi 59.5 23 0.00077 26.5 6.2 58 102-159 48-110 (194)
184 2wfp_A Mannose-6-phosphate iso 59.3 18 0.00062 32.4 6.4 52 101-160 341-392 (394)
185 3avr_A Lysine-specific demethy 59.0 5.2 0.00018 37.7 2.8 42 124-168 337-379 (531)
186 3i3q_A Alpha-ketoglutarate-dep 58.9 11 0.00038 31.0 4.6 40 106-145 135-176 (211)
187 4ask_A Lysine-specific demethy 58.0 5.8 0.0002 37.3 3.0 24 124-147 312-335 (510)
188 3idb_B CAMP-dependent protein 56.8 53 0.0018 23.7 7.7 56 102-158 79-138 (161)
189 1ft9_A Carbon monoxide oxidati 56.4 49 0.0017 25.3 7.9 52 102-158 41-93 (222)
190 2ypd_A Probable JMJC domain-co 56.4 11 0.00037 34.3 4.4 39 125-163 293-331 (392)
191 1pmi_A PMI, phosphomannose iso 54.5 28 0.00095 31.7 6.9 57 101-160 378-438 (440)
192 1j1l_A Pirin; beta sandwich, c 53.4 36 0.0012 29.2 7.1 62 95-160 53-118 (290)
193 3dv8_A Transcriptional regulat 53.1 54 0.0018 24.8 7.5 85 59-158 16-106 (220)
194 2lcj_A PAB POLC intein; hydrol 52.2 49 0.0017 25.9 7.2 27 106-139 95-121 (185)
195 3b02_A Transcriptional regulat 52.1 43 0.0015 25.2 6.7 58 102-159 17-77 (195)
196 1znp_A Hypothetical protein AT 49.0 32 0.0011 27.3 5.6 55 94-148 52-114 (154)
197 3gyd_A CNMP-BD protein, cyclic 47.3 48 0.0017 25.0 6.3 35 102-136 80-115 (187)
198 2oz6_A Virulence factor regula 47.0 78 0.0027 23.6 7.4 57 102-158 31-95 (207)
199 3iwz_A CAP-like, catabolite ac 46.8 65 0.0022 24.5 7.1 85 59-158 24-113 (230)
200 2bgc_A PRFA; bacterial infecti 44.7 42 0.0014 26.2 5.8 38 102-139 36-73 (238)
201 3ryp_A Catabolite gene activat 43.9 52 0.0018 24.6 6.0 57 102-158 37-98 (210)
202 4ev0_A Transcription regulator 42.4 49 0.0017 24.9 5.7 58 102-159 40-101 (216)
203 3fx3_A Cyclic nucleotide-bindi 42.1 54 0.0018 25.2 5.9 85 59-158 24-112 (237)
204 3opt_A DNA damage-responsive t 42.0 29 0.00098 31.3 4.7 48 124-174 304-352 (373)
205 2lj0_A Sorbin and SH3 domain-c 41.6 12 0.00041 24.9 1.7 37 126-169 22-58 (65)
206 3m3i_A Putative uncharacterize 41.3 67 0.0023 27.0 6.6 53 95-147 73-160 (225)
207 3d0s_A Transcriptional regulat 41.1 62 0.0021 24.7 6.1 58 102-159 47-108 (227)
208 2iuw_A Alkylated repair protei 40.6 33 0.0011 28.3 4.7 38 107-144 159-206 (238)
209 3kcc_A Catabolite gene activat 38.6 64 0.0022 25.6 6.0 57 102-158 87-148 (260)
210 1o5l_A Transcriptional regulat 38.5 62 0.0021 24.7 5.8 57 102-158 40-101 (213)
211 3e97_A Transcriptional regulat 37.9 85 0.0029 23.9 6.5 63 59-136 19-82 (231)
212 3pna_A CAMP-dependent protein 37.5 66 0.0023 23.0 5.5 31 102-136 79-109 (154)
213 4ava_A Lysine acetyltransferas 37.3 56 0.0019 26.8 5.6 57 102-158 54-113 (333)
214 2z69_A DNR protein; beta barre 36.5 38 0.0013 23.9 4.0 58 102-159 53-115 (154)
215 2zcw_A TTHA1359, transcription 36.2 57 0.0019 24.5 5.1 56 103-158 26-84 (202)
216 3la7_A Global nitrogen regulat 34.6 74 0.0025 24.9 5.7 35 102-136 61-96 (243)
217 2lok_A Uncharacterized protein 34.1 1.5E+02 0.0051 24.3 7.5 80 31-138 33-116 (197)
218 2ptm_A Hyperpolarization-activ 33.8 63 0.0021 24.3 5.0 54 102-158 112-168 (198)
219 1zyb_A Transcription regulator 33.7 58 0.002 25.2 4.9 88 59-159 31-123 (232)
220 3e6c_C CPRK, cyclic nucleotide 32.3 86 0.0029 24.4 5.8 36 102-137 50-86 (250)
221 1uhe_A Aspartate 1-decarboxyla 32.1 10 0.00034 28.2 0.1 30 106-139 32-63 (97)
222 3s57_A Alpha-ketoglutarate-dep 30.8 38 0.0013 27.3 3.4 38 106-143 132-178 (204)
223 2a1x_A Phytanoyl-COA dioxygena 30.1 68 0.0023 26.5 5.0 46 122-167 213-261 (308)
224 2gau_A Transcriptional regulat 29.4 59 0.002 24.9 4.2 86 59-159 23-112 (232)
225 2d93_A RAP guanine nucleotide 29.0 99 0.0034 21.4 5.1 52 103-158 59-114 (134)
226 3g7d_A PHPD; non heme Fe(II) d 28.9 1.7E+02 0.0056 26.6 7.4 40 106-146 358-397 (443)
227 4dsd_A Putative periplasmic pr 28.6 84 0.0029 23.6 4.8 55 75-132 3-70 (129)
228 2qjv_A Uncharacterized IOLB-li 28.5 2.4E+02 0.0083 24.0 8.3 69 68-149 25-101 (270)
229 2qcs_B CAMP-dependent protein 28.1 1.2E+02 0.0041 24.0 6.0 34 103-136 199-234 (291)
230 2lnu_A Uncharacterized protein 27.8 1.7E+02 0.0057 23.8 6.8 79 32-138 27-111 (190)
231 2opw_A Phyhd1 protein; double- 27.0 55 0.0019 26.7 3.8 40 123-162 226-268 (291)
232 2fpe_A C-JUN-amino-terminal ki 26.5 23 0.0008 22.4 1.1 36 127-169 20-55 (62)
233 2fi9_A Outer membrane protein; 26.2 32 0.0011 25.9 2.1 29 109-145 20-48 (128)
234 2cw8_A Endonuclease PI-pkoii; 26.2 63 0.0022 29.7 4.4 16 129-144 114-129 (537)
235 3shr_A CGMP-dependent protein 24.7 1.3E+02 0.0044 24.0 5.6 57 103-159 199-260 (299)
236 3rnj_A Brain-specific angiogen 24.5 34 0.0012 21.9 1.7 37 127-169 25-61 (67)
237 2j05_A RAS GTPase-activating p 24.5 33 0.0011 21.9 1.6 36 127-169 23-58 (65)
238 2rdq_A 1-deoxypentalenic acid 24.2 58 0.002 26.5 3.4 40 122-161 208-253 (288)
239 2cyj_A Hypothetical protein PH 23.5 37 0.0013 25.3 1.9 23 111-141 7-29 (118)
240 3p42_A Predicted protein; beta 23.4 59 0.002 27.0 3.4 15 128-142 191-205 (236)
241 2jmz_A Hypothetical protein MJ 23.1 42 0.0014 26.3 2.3 30 106-142 105-134 (186)
242 1o7f_A CAMP-dependent RAP1 gua 22.9 1.7E+02 0.0059 25.1 6.4 57 102-158 83-144 (469)
243 2lqo_A Putative glutaredoxin R 22.6 1.7E+02 0.0057 20.3 5.2 41 39-81 22-63 (92)
244 1ihn_A Hypothetical protein MT 21.8 45 0.0015 24.7 2.0 23 111-141 8-30 (113)
245 3dxt_A JMJC domain-containing 21.7 98 0.0034 27.6 4.6 46 123-171 260-306 (354)
246 2fvt_A Conserved hypothetical 21.5 33 0.0011 26.3 1.3 27 111-145 20-46 (135)
247 2iim_A Proto-oncogene tyrosine 20.1 28 0.00097 22.0 0.5 34 127-168 23-56 (62)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=7.2e-55 Score=365.01 Aligned_cols=178 Identities=64% Similarity=1.146 Sum_probs=170.7
Q ss_pred cceeEEEecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCCCccChHHHHHHHHhcCCCeeeeEEECCCCCCChHH
Q 029096 10 EVIQAWYMDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEE 89 (199)
Q Consensus 10 ~m~~aw~~d~~~~d~~l~~~~~p~~~v~~~~L~~lGV~~w~~~~~~~~~~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~ 89 (199)
-||+|||||++++|||+||+++|++.||+++|+++||+||+++++..+.+.+|++|++++||.+.|+++++|+.+||+++
T Consensus 12 ~~~~~~~~~~~~~d~~~ph~~~~~~~v~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~~~ 91 (191)
T 1vr3_A 12 HMVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYEE 91 (191)
T ss_dssp -CCEEEEBCSCCSCTTSCCBCSSCCBCCHHHHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHHH
T ss_pred hhheeeeccCCccccCcccccCCCCccCHHHHHhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcchhh
Confidence 59999999999999999999999999999999999999999988766678899999999999999999999997799999
Q ss_pred HHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCceeecC
Q 029096 90 KIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 169 (199)
Q Consensus 90 ~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~~~~ 169 (199)
|++.|+.+|+|+++|++||++|+|+|.|++.+|+|+++.|++||+|+||+|++|||++++++++++||||.+++||+|++
T Consensus 92 k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~~~ 171 (191)
T 1vr3_A 92 KIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYN 171 (191)
T ss_dssp HHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCCEE
T ss_pred hhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccCCC
Confidence 99999999999999999999999999999777889999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHhh
Q 029096 170 RPHDHLPARKGYVQNFLQ 187 (199)
Q Consensus 170 r~~d~~~~r~~yl~~~~~ 187 (199)
||+|++++|++||++|..
T Consensus 172 r~~~~~~~r~~y~~~~~~ 189 (191)
T 1vr3_A 172 RPADHFDARVQYMSFLEG 189 (191)
T ss_dssp SCCTTSHHHHHHHHHHHH
T ss_pred CchhccHHHHHHHHHhhh
Confidence 999999999999999873
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=100.00 E-value=5.1e-37 Score=254.06 Aligned_cols=158 Identities=24% Similarity=0.430 Sum_probs=135.0
Q ss_pred ecCCCCCCCCCCCCCCCCcCCHhHHhhcCeEEEEeCCC-----Ccc-------ChHHHHHHHHhcCCCeeeeEEECCCCC
Q 029096 17 MDDSDEDQRLPHHKDPKEFVSLDQLSELGVLSWRLDAD-----NYE-------TDEELKKIREDRGYSYMDFCEVCPEKL 84 (199)
Q Consensus 17 ~d~~~~d~~l~~~~~p~~~v~~~~L~~lGV~~w~~~~~-----~~~-------~~~~l~~l~~e~gY~~~Dvv~i~p~~~ 84 (199)
++++++..++....++..++ ++|+++||+||+++++ ..+ ++.+|++|++++||+++|+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~--~~L~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~- 82 (179)
T 1zrr_A 6 FSVKDPQNSLWHSTNAEEIQ--QQLNAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN- 82 (179)
T ss_dssp ECSSCSSCEEEEECCSHHHH--HHHHHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-
T ss_pred ecCCCcCCcceeeCCHHHHH--HHHHHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-
Confidence 44555555555555666666 9999999999555442 111 45689999999999999999999985
Q ss_pred CChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCc
Q 029096 85 PNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 164 (199)
Q Consensus 85 p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~g 164 (199)
|++++|+++|+.+|.|+++|++||++|+|+|.|+ .+|+|+++.|++||+|+||+|++|||+++++++++|||+|.+++|
T Consensus 83 p~~~~~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~ 161 (179)
T 1zrr_A 83 PQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEG 161 (179)
T ss_dssp THHHHHHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGG
T ss_pred CChhHhhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCC
Confidence 9999999999999999999999999999999998 678999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCchhHH
Q 029096 165 WTPFNRPHDHLPARK 179 (199)
Q Consensus 165 W~~~~r~~d~~~~r~ 179 (199)
|++++|+ ++++.|+
T Consensus 162 w~~~~~g-~~ia~~~ 175 (179)
T 1zrr_A 162 WIAQFTG-DDIASAY 175 (179)
T ss_dssp EESCSSC-CCSGGGS
T ss_pred ccccCCC-chhHhhC
Confidence 9998885 4455553
No 3
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.97 E-value=1.7e-09 Score=76.62 Aligned_cols=63 Identities=17% Similarity=0.253 Sum_probs=52.4
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
..+|.|.. +|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+..+..+-++.++
T Consensus 41 ~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 41 QKVHVHEGSDKVYYALEGEVVVRVG---EE--EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp EEEECCSSCEEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred CCccCCCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 46899996 7999999999999984 44 4789999999999999999987665567777776654
No 4
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.96 E-value=2.2e-09 Score=80.16 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=61.9
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
.-.+++.|.. ...+|.|.. +|+.||++|++.+.+. +++ .+.+++||++.+|+|+.|++....+..
T Consensus 41 ~~~~~~~pg~----------~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~ 106 (125)
T 3h8u_A 41 VVVWHAHPGQ----------EIASHVHPHGQDTWTVISGEAEYHQG--NGI--VTHLKAGDIAIAKPGQVHGAMNSGPEP 106 (125)
T ss_dssp EEEEEECTTC----------EECCC-CTTCEEEEEEEECEEEEECS--TTC--EEEEETTEEEEECTTCCCEEEECSSSC
T ss_pred EEEEEECCCC----------cCCcccCCCCeEEEEEEEeEEEEEEC--CCe--EEEeCCCCEEEECCCCEEEeEeCCCCC
Confidence 3456666653 367999996 8999999999999883 344 368999999999999999998866666
Q ss_pred EEEEEEecCC-Cceeec
Q 029096 153 IKAMRLFVGD-PVWTPF 168 (199)
Q Consensus 153 ~~alRlF~~~-~gW~~~ 168 (199)
+..+-++.+. +++.+.
T Consensus 107 ~~~l~v~~p~~~~~~~~ 123 (125)
T 3h8u_A 107 FIFVSVVAPGNAGFALA 123 (125)
T ss_dssp EEEEEEEESTTCCCCCC
T ss_pred EEEEEEECCCcccchhh
Confidence 7888787763 555543
No 5
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.92 E-value=6.4e-09 Score=84.99 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=57.1
Q ss_pred ccccccCc---ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 95 FEEHLHTD---EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 95 ~~eH~H~d---dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
...|.|.. +|++||++|++.+.+.+..++++.+.+++||+|.+|+|+.|++....+..++.+-++...
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 45788863 799999999999999976678888999999999999999999987666667777666554
No 6
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=3.8e-09 Score=79.19 Aligned_cols=63 Identities=17% Similarity=0.235 Sum_probs=50.9
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
...+|.|..+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++...++..+..+-+|..
T Consensus 48 ~~~~H~H~~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 48 QVGSHSVAGPSTIQCLEGEVEIGVD---GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp EEEEECCSSCEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred ccCceeCCCcEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 3678999999999999999999995 44 468999999999999999998876644444444433
No 7
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.86 E-value=5.4e-09 Score=77.33 Aligned_cols=66 Identities=9% Similarity=0.084 Sum_probs=53.5
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCc
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 164 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~g 164 (199)
..+|.|...|+.||++|++.+.+. ++.+ +.+++||++.+|+|+.|++....+..+..+-++.+.+.
T Consensus 40 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~~-~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 40 MPKHYSNSYVHLIIIKGEMTLTLE---DQEP-HNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp CCCEECSSCEEEEEEESEEEEEET---TSCC-EEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGG
T ss_pred CCCEeCCCcEEEEEEeCEEEEEEC---CEEE-EEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCC
Confidence 568999999999999999999995 3321 27999999999999999998766666677767555554
No 8
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.83 E-value=7.4e-09 Score=77.20 Aligned_cols=72 Identities=18% Similarity=0.295 Sum_probs=57.2
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcE
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~ 153 (199)
.-.+++.|.. -..+|.|..+|+.||++|++.+.+. ++ ...+.+||++.+|+|+.|++....+ ..
T Consensus 43 ~~~~~~~pg~----------~~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~ 106 (126)
T 4e2g_A 43 LNWVRIEPNT----------EMPAHEHPHEQAGVMLEGTLELTIG---EE--TRVLRPGMAYTIPGGVRHRARTFED-GC 106 (126)
T ss_dssp EEEEEECTTC----------EEEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTEEEEECTTCCEEEECCTT-CE
T ss_pred EEEEEECCCC----------cCCCccCCCceEEEEEEeEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEECCC-CE
Confidence 3456666653 2578999999999999999999994 44 4689999999999999999987655 46
Q ss_pred EEEEEecC
Q 029096 154 KAMRLFVG 161 (199)
Q Consensus 154 ~alRlF~~ 161 (199)
..+-+|.+
T Consensus 107 ~~l~v~~p 114 (126)
T 4e2g_A 107 LVLDIFSP 114 (126)
T ss_dssp EEEEEEES
T ss_pred EEEEEECC
Confidence 66766653
No 9
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.82 E-value=1.8e-08 Score=82.61 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=72.9
Q ss_pred hcCeEEEEeCCCCccChHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCC
Q 029096 43 ELGVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRN 121 (199)
Q Consensus 43 ~lGV~~w~~~~~~~~~~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~ 121 (199)
..|-..+.+..... +. ....|+ ..-.+.+.|.. ....|.|.. +|+.||++|++.+.+.+.+
T Consensus 51 ~~G~~v~~~~~~~~---p~----l~~~~~-~~~~~~l~pg~----------~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~ 112 (201)
T 1fi2_A 51 PNGSAVTELDVAEW---PG----TNTLGV-SMNRVDFAPGG----------TNPPHIHPRATEIGMVMKGELLVGILGSL 112 (201)
T ss_dssp TTSEEEEEESTTTC---GG----GTTSSC-EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECCG
T ss_pred CCCcEEEEEecccC---CC----cccCce-EEEEEEECCCC----------CCCCeECCCCCEEEEEEeCEEEEEEEcCC
Confidence 34655666654332 11 122344 33456677653 357899996 7999999999999997544
Q ss_pred ---CcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC-CCc
Q 029096 122 ---EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG-DPV 164 (199)
Q Consensus 122 ---d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~-~~g 164 (199)
++.+...+++||++++|+|+.|++....+..+..+-+|.. .+|
T Consensus 113 ~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 113 DSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp GGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 6766789999999999999999997655556777777754 344
No 10
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.81 E-value=2.9e-08 Score=77.09 Aligned_cols=68 Identities=16% Similarity=0.289 Sum_probs=54.6
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
..+|.|.. +|+.||++|++.+.+.+..+ .++++.+.+||+|.+|+|+.|++....+..+..+-++.+.
T Consensus 56 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 56 IGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp CCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred cCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 57899986 69999999999999984432 1455789999999999999999987666567777666553
No 11
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.80 E-value=1.1e-08 Score=77.39 Aligned_cols=63 Identities=21% Similarity=0.213 Sum_probs=51.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
+..|.|+..|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+..+..+-++..+
T Consensus 61 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 61 IDRHSHPWEHEIFVLKGKLTVLKE---QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKE 123 (126)
T ss_dssp EEEECCSSCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGG
T ss_pred CCceeCCCcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 568999999999999999999985 44 3689999999999999999987655556666665543
No 12
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.80 E-value=1.3e-08 Score=73.54 Aligned_cols=62 Identities=18% Similarity=0.247 Sum_probs=51.2
Q ss_pred cccc--ccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 95 FEEH--LHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 95 ~~eH--~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
..+| .|. .+|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+..+..+-++.+
T Consensus 34 ~~~h~~~H~~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 34 EGGPDNRHRGADQWLFVVDGAGEAIVD---GH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EECCCSSSCCCEEEEEEEECCEEEEET---TE--EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred cCCcccccCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 4567 998 79999999999999984 44 368999999999999999998766556677766654
No 13
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.79 E-value=1.7e-08 Score=75.36 Aligned_cols=61 Identities=16% Similarity=0.315 Sum_probs=50.2
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEe
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF 159 (199)
....|.|...|+.||++|++.+.+. ++ ...+++||+++||+|+.|++....+..+..+-++
T Consensus 46 ~~~~H~H~~~Ei~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~ 106 (128)
T 4i4a_A 46 KSFRHSHNEYELFIVIQGNAIIRIN---DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW 106 (128)
T ss_dssp ECCCBCCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred ccCCEecCCeEEEEEEeCEEEEEEC---CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 3678999999999999999999995 44 4689999999999999999987655545555444
No 14
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.79 E-value=8.3e-09 Score=73.59 Aligned_cols=51 Identities=27% Similarity=0.420 Sum_probs=44.7
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 94 f~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
.+.+|.|+. +|+.||++|++.+.+. ++ ...+.+||+++||+|+.|++....
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAFR---DQ--NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEEC---CE--EEEEcCCCEEEECCCCeEeeEcCC
Confidence 368999998 9999999999999985 33 467999999999999999998753
No 15
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.78 E-value=1.4e-08 Score=76.75 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=56.8
Q ss_pred cCCCeeeeEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeee
Q 029096 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 69 ~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
.|....-++.+... | .....+|.|.. +|+.||++|++.+.+. +++ .+.+++||++++|+|+.|++..
T Consensus 38 ~g~~~~~~~~~~~~--~------g~~~~~H~H~~~~E~~~vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 38 GGMFGAHVIRAIPG--K------EAKPTWHTHTVGFQLFYVLRGWVEFEYE--DIG--AVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp TTSCEEEEEEECC-------------CCCEEECCSCEEEEEEESEEEEEET--TTE--EEEEETTCEEECCTTCCEEEEE
T ss_pred CCceEEEEEEEecC--C------CCCCCCEECCCCcEEEEEEeCEEEEEEC--CcE--EEEecCCCEEEECCCCcEEeEe
Confidence 34444457776632 2 12257999998 9999999999999995 214 4789999999999999999987
Q ss_pred cCCCcEEEEEEecC
Q 029096 148 DTDNYIKAMRLFVG 161 (199)
Q Consensus 148 ~~~~~~~alRlF~~ 161 (199)
..+. ...+-++.+
T Consensus 106 ~~~~-~~~l~~~~p 118 (134)
T 2o8q_A 106 HSDD-LEVLEIVSP 118 (134)
T ss_dssp ECTT-CEEEEEESS
T ss_pred CCCC-eEEEEEECC
Confidence 4443 355545544
No 16
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.77 E-value=1.8e-08 Score=73.88 Aligned_cols=60 Identities=18% Similarity=0.126 Sum_probs=50.0
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
...|.|..+|+.||++|++.+.+. ++ ...+.+||++.+|+|+.|++.... ....+-+|.+
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~~p 106 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVD---GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTFSP 106 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEEES
T ss_pred CCcEECCcceEEEEEeeEEEEEEC---CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEECC
Confidence 578999999999999999999984 44 468999999999999999998765 2456666653
No 17
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.77 E-value=1.8e-08 Score=73.82 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=47.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEe
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF 159 (199)
..+|.|+.+|+.||++|++.+.+. ++ ...+.+||++.+|+|+.|++....+ .+.+-++
T Consensus 53 ~~~H~H~~~e~~~vl~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~~v~ 110 (115)
T 1yhf_A 53 IGRHSSPGDAMVTILSGLAEITID---QE--TYRVAEGQTIVMPAGIPHALYAVEA--FQMLLVV 110 (115)
T ss_dssp EEEECCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTSCEEEEESSC--EEEEEEE
T ss_pred cCCEECCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECCC--ceEEEEE
Confidence 568999999999999999999984 44 3689999999999999999987654 4444333
No 18
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.77 E-value=1.1e-08 Score=75.28 Aligned_cols=51 Identities=12% Similarity=0.181 Sum_probs=44.6
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
...|.|..+|+.||++|++.+.+. ++ ...+++||+|.+|+|+.|++...++
T Consensus 51 ~~~H~h~~~e~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~~~~~ 101 (114)
T 2ozj_A 51 VSEEEYFGDTLYLILQGEAVITFD---DQ--KIDLVPEDVLMVPAHKIHAIAGKGR 101 (114)
T ss_dssp CCCBCCSSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCCBEEEEEEE
T ss_pred cccEECCCCeEEEEEeCEEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 568999999999999999999994 44 4689999999999999999987543
No 19
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.76 E-value=2.5e-08 Score=82.20 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=48.3
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 93 NFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 93 ~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
..+.+|.|+.||++|+++|++.+.+++. ++.-.|.+++||+++||+|+.|+....+
T Consensus 46 ~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 46 HRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4589999999999999999999999953 4445699999999999999999986543
No 20
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.76 E-value=2.9e-08 Score=78.01 Aligned_cols=69 Identities=14% Similarity=0.144 Sum_probs=54.4
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----CcEEEEEEecCCEEEeCCCCceeeeecC-CCcEEEEEEecCCC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRN----EKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRLFVGDP 163 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~----d~~~ri~~~~GDlI~vPaG~~HrF~~~~-~~~~~alRlF~~~~ 163 (199)
...|.|..+|+.||++|++.+.+.+.+ ++.-++.+++||++.||+|+.|++.... +..+..+-++...+
T Consensus 54 ~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~ 127 (163)
T 1lr5_A 54 TPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPP 127 (163)
T ss_dssp CCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESSS
T ss_pred CCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCCC
Confidence 578999999999999999999997421 1222578999999999999999998765 55577776665543
No 21
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.75 E-value=1.9e-08 Score=76.20 Aligned_cols=64 Identities=20% Similarity=0.181 Sum_probs=53.5
Q ss_pred cccccccCcceEEEEEeceEEEE--EEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFD--VRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~--v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
...+|.|...|+.||++|++.+. +. ++ ...+++||++.+|+|+.|++....+..+..+-++...
T Consensus 51 ~~~~H~H~~~e~~~vl~G~~~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 51 STPPHFHEWEHEIYVLEGSMGLVLPDQ---GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp ECCCEECSSCEEEEEEEECEEEEEGGG---TE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred cCCCccCCCceEEEEEEeEEEEEEeEC---CE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 36799999999999999999999 74 44 4689999999999999999987666667777776554
No 22
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.74 E-value=2e-08 Score=85.41 Aligned_cols=66 Identities=29% Similarity=0.325 Sum_probs=55.3
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCC
Q 029096 93 NFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (199)
Q Consensus 93 ~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~ 163 (199)
..|++|.|..+|++|||+|++.|.+. +++| ..+.+||.|.+|+|+.|+.++++. .+.++-+..+.+
T Consensus 143 ~~yP~HsHp~EEiy~VLsG~~e~~v~--~g~~--~~l~pGd~v~ipsgv~Ha~rt~de-PllalwvW~G~~ 208 (217)
T 4b29_A 143 LDYGWHEHLPEELYSVVSGRALFHLR--NAPD--LMLEPGQTRFHPANAPHAMTTLTD-PILTLVLWRGAG 208 (217)
T ss_dssp CEEEEEECSSEEEEEEEEECEEEEET--TSCC--EEECTTCEEEECTTCCEEEECCSS-CEEEEEEEESTT
T ss_pred CcCCCCCCCCceEEEEEeCCEEEEEC--CCCE--EecCCCCEEEcCCCCceeEEECCc-cEEEEEEEeCCC
Confidence 45999999999999999999999995 4566 579999999999999999997664 467776666544
No 23
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.73 E-value=1.1e-07 Score=76.12 Aligned_cols=64 Identities=8% Similarity=0.121 Sum_probs=53.4
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC-CCcEEEEEEecCC
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRLFVGD 162 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~-~~~~~alRlF~~~ 162 (199)
....|.|..+|+.||++|++.+.+. ++ ...+++||+|.||+|+.|++.... +..+..+-++...
T Consensus 68 ~~~~H~H~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 68 YTTLERHEHTHVVMVVRGHAEVVLD---DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp BCCCBBCSSCEEEEEEESEEEEEET---TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CCCCccCCCcEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 3578999999999999999999985 44 468999999999999999998765 6567777666654
No 24
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.71 E-value=6.6e-08 Score=75.70 Aligned_cols=78 Identities=19% Similarity=0.282 Sum_probs=61.8
Q ss_pred eeEEECCCCCCChHHHHhcccccccc-CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCC-CceeeeecCCCc
Q 029096 75 DFCEVCPEKLPNYEEKIKNFFEEHLH-TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG-CYHRFTLDTDNY 152 (199)
Q Consensus 75 Dvv~i~p~~~p~~e~~~~~f~~eH~H-~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG-~~HrF~~~~~~~ 152 (199)
-.+++.|.. .....|.| ..+|+.||++|++.+.+. ++ .+.+++||.|.+|+| +.|++....+..
T Consensus 49 ~~~~l~pg~---------~~~~~H~H~~~~E~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~ 114 (162)
T 3l2h_A 49 HLIQIEPGK---------ESTEYHLHHYEEEAVYVLSGKGTLTME---ND--QYPIAPGDFVGFPCHAAAHSISNDGTET 114 (162)
T ss_dssp EEEEECTTC---------BSSSSBEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTSCCEEEECCSSSC
T ss_pred EEEEECCCC---------cCCCCccCCCCCEEEEEEEEEEEEEEC---CE--EEEeCCCCEEEECCCCceEEeEeCCCCC
Confidence 446677653 13578999 679999999999999985 44 378999999999998 999998766666
Q ss_pred EEEEEEecCCCcee
Q 029096 153 IKAMRLFVGDPVWT 166 (199)
Q Consensus 153 ~~alRlF~~~~gW~ 166 (199)
+..+-++.+.+.-+
T Consensus 115 ~~~l~v~~p~~~~~ 128 (162)
T 3l2h_A 115 LVCLVIGQRLDQDV 128 (162)
T ss_dssp EEEEEEEECCSEEE
T ss_pred EEEEEEECCCCCCe
Confidence 88888887766543
No 25
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.71 E-value=3.3e-08 Score=71.34 Aligned_cols=63 Identities=22% Similarity=0.259 Sum_probs=50.5
Q ss_pred cccccccCc-ceE-EEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 94 FFEEHLHTD-EEI-RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 94 f~~eH~H~d-dEv-r~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
...+|.|.. .|+ .||++|++.+.+. +++ ...+++||++.+|+|+.|++....+ ...+-+|.++
T Consensus 45 ~~~~H~H~~~~e~~~~vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~~p~ 109 (110)
T 2q30_A 45 ELPVHSHNIEGELNIVVLEGEGEFVGD--GDA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTIAPP 109 (110)
T ss_dssp EEEEECCSSSCEEEEEEEESCEEEECG--GGC--EEEECTTEEEEEETTSCEEEEESSS--EEEEEEEESC
T ss_pred cCCcccCCCCccEEEEEEeCEEEEEeC--CCE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEECCC
Confidence 367899996 688 8999999999884 134 3689999999999999999987654 5667677654
No 26
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.71 E-value=1.3e-08 Score=74.24 Aligned_cols=50 Identities=22% Similarity=0.401 Sum_probs=41.8
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
+.+|.|+. +|+.||++|++.+.+. +++ .+.+++||.+.+|+|+.|++...
T Consensus 40 ~~~H~H~~~~E~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 40 YGWHTHGYSDKVLFAVEGDMAVDFA--DGG--SMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp CCCBCC--CCEEEEESSSCEEEEET--TSC--EEEECTTEEEEECTTCCEEEEEE
T ss_pred CcceeCCCCCEEEEEEeCEEEEEEC--CCc--EEEECCCCEEEECCCCcEeeEeC
Confidence 35899998 9999999999999995 214 46899999999999999999874
No 27
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.70 E-value=4.5e-08 Score=76.43 Aligned_cols=63 Identities=21% Similarity=0.311 Sum_probs=52.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
..+|.|...|+.||++|++.+.+. ++. ...+.+||+|.+|+|+.|++....+..+..+-++..
T Consensus 61 ~~~H~H~~~E~~~Vl~G~~~~~~~---~~~-~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 61 THWHSHPGGQILIVTRGKGFYQER---GKP-ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp ECSEECTTCEEEEEEEEEEEEEET---TSC-CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred cCceECCCceEEEEEeCEEEEEEC---CEE-EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 468999999999999999999985 331 157999999999999999998877666777777765
No 28
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.69 E-value=4.2e-08 Score=78.22 Aligned_cols=65 Identities=15% Similarity=0.184 Sum_probs=54.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCc
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPV 164 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~g 164 (199)
...|.|..+|+.||++|++.+.+. ++ ...+++||+|.||+|+.|.+....+..+..+-++..+..
T Consensus 57 ~~~H~H~~~E~~~Vl~G~~~v~v~---g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 57 STLERHAHVHAVMIHRGHGQCLVG---ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARD 121 (156)
T ss_dssp CCCBBCSSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSCC
T ss_pred cCceeCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCC
Confidence 578999999999999999999984 55 468999999999999999998766666777777766543
No 29
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.68 E-value=3.6e-08 Score=78.78 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=64.7
Q ss_pred HhccccccccCc-ceEEEEEeceEEEEEEeCCCc---EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCcee
Q 029096 91 IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWT 166 (199)
Q Consensus 91 ~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d~---~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~ 166 (199)
+...-..|.|.+ ||+|++++|++.+.+++.++. --.+.+++|++++||+|+.|+..+.+. ++.| |+-+.. +
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e--~~vL-LiEp~n--T 112 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKD--TKMM-YVQDSN--C 112 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTT--CEEE-EEEESC--C
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCc--eEEE-EEEeCC--C
Confidence 356678999986 999999999999999954211 125899999999999999999998665 3444 443331 1
Q ss_pred ecCCC--CCCchhHHHHHHHHh
Q 029096 167 PFNRP--HDHLPARKGYVQNFL 186 (199)
Q Consensus 167 ~~~r~--~d~~~~r~~yl~~~~ 186 (199)
....+ ......+.++++.+.
T Consensus 113 Gd~~se~t~~~~~~i~~i~~~~ 134 (140)
T 3d0j_A 113 SMDNSDFCDLSKEEIEYIQTNA 134 (140)
T ss_dssp CGGGEEEEECCHHHHHHHHHHH
T ss_pred CCCCCccccCCHHHHHHHHHHH
Confidence 11111 245567888888764
No 30
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.66 E-value=1.1e-07 Score=76.48 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=53.4
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
....|.|..+|+.||++|++.+.+. ++ ...+++||+|.||+|+.|++....+..+..+-++...
T Consensus 65 ~~~~H~H~~~E~~~Vl~G~~~~~v~---g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 65 HSTLERHQHAHGVMILKGRGHAMVG---RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp ECCCBBCSSCEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred ccCceeCCCcEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 3578999999999999999999984 55 4689999999999999999987666666766666654
No 31
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.65 E-value=1.1e-07 Score=83.33 Aligned_cols=79 Identities=22% Similarity=0.222 Sum_probs=61.9
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCC
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~ 151 (199)
..-.+++.|.. ....|.|. .+|+.||++|++.+.+.+.+++.....+++||++.||+|+.|++....+.
T Consensus 53 ~~~~~~l~pg~----------~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~ 122 (361)
T 2vqa_A 53 AGVYMSLEPGA----------IRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPD 122 (361)
T ss_dssp EEEEEEECTTC----------EEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSS
T ss_pred eeEEEEEcCCC----------CCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Confidence 44566677653 35689999 79999999999999997655543347899999999999999999876655
Q ss_pred cEEEEEEecC
Q 029096 152 YIKAMRLFVG 161 (199)
Q Consensus 152 ~~~alRlF~~ 161 (199)
.+..+-+|..
T Consensus 123 ~~~~l~v~~~ 132 (361)
T 2vqa_A 123 TAKFLLVFND 132 (361)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEECC
Confidence 5777766654
No 32
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.63 E-value=8.1e-08 Score=73.26 Aligned_cols=76 Identities=12% Similarity=0.256 Sum_probs=52.8
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
+.-.+++.|.. -+.+|. ..+|+.|||+|++.+.+. ++ .+.+++||.|.||+|+.|++.... ..
T Consensus 41 ~~~~~~~~pG~----------~~~~H~-~~~E~~~Vl~G~~~~~~~---g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~ 103 (119)
T 3lwc_A 41 TIGYGRYAPGQ----------SLTETM-AVDDVMIVLEGRLSVSTD---GE--TVTAGPGEIVYMPKGETVTIRSHE-EG 103 (119)
T ss_dssp EEEEEEECTTC----------EEEEEC-SSEEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCEEEEEEEE-EE
T ss_pred EEEEEEECCCC----------CcCccC-CCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCEEEEEcCC-CC
Confidence 34556677653 146675 679999999999999983 55 478999999999999999998653 33
Q ss_pred EEEEEEecCCCceee
Q 029096 153 IKAMRLFVGDPVWTP 167 (199)
Q Consensus 153 ~~alRlF~~~~gW~~ 167 (199)
.+.+-+.. |.|..
T Consensus 104 ~~~l~v~~--P~w~~ 116 (119)
T 3lwc_A 104 ALTAYVTY--PHWRP 116 (119)
T ss_dssp EEEEEEEE--CC---
T ss_pred eEEEEEEC--CCCcc
Confidence 44443333 33864
No 33
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.61 E-value=8.8e-08 Score=71.67 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=46.4
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCC-cEEEEEEec
Q 029096 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN-YIKAMRLFV 160 (199)
Q Consensus 96 ~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~-~~~alRlF~ 160 (199)
.+|.|..+|+.||++|++.+.++ ++...+.+++||.|.||+|+.|++....+. ....+-+|.
T Consensus 47 ~~~~~~~~E~~~Vl~G~~~l~~~---~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 47 FWYDSPQDEWVMVVSGSAGIECE---GDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp CCBCCSSEEEEEEEESCEEEEET---TCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred ccccCCccEEEEEEeCeEEEEEC---CEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 34778889999999999999996 221016799999999999999999764432 444444443
No 34
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.61 E-value=1e-07 Score=75.78 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=60.5
Q ss_pred eeEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCC--CceeeeecCCC
Q 029096 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRFTLDTDN 151 (199)
Q Consensus 75 Dvv~i~p~~~p~~e~~~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG--~~HrF~~~~~~ 151 (199)
-++++.|.. .....|.|.. +|+.||++|++.+.+. ++ .+.+++||.|.+|+| +.|++....+.
T Consensus 46 ~~~~l~pG~---------~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~ 111 (163)
T 3i7d_A 46 NLVRLEPGA---------KSSLRHYHMEQDEFVMVTEGALVLVDD---QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDA 111 (163)
T ss_dssp EEEEECTTC---------BSSSSEEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCCCBEEECCSSS
T ss_pred EEEEECCCC---------cCCCCccCCCCcEEEEEEECEEEEEEC---CE--EEEeCCCCEEEECCCCCcceEEEECCCC
Confidence 456777664 1236899998 7999999999999995 44 478999999999999 99999876666
Q ss_pred cEEEEEEecCCCc
Q 029096 152 YIKAMRLFVGDPV 164 (199)
Q Consensus 152 ~~~alRlF~~~~g 164 (199)
.++.+-++...+.
T Consensus 112 ~~~~l~v~~p~~~ 124 (163)
T 3i7d_A 112 PATFLVVGTRTPT 124 (163)
T ss_dssp CEEEEEEEECCSC
T ss_pred CEEEEEEECCCCC
Confidence 6788877776553
No 35
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.60 E-value=1.6e-07 Score=82.10 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=56.4
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
...|.|.. +|+.||++|++.+.+.+.+++...+.+++||.+++|+|+.|++....+..++.+-++..
T Consensus 247 ~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 247 RQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp EEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred cccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 56799998 99999999999999975566645688999999999999999998765556777777764
No 36
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.59 E-value=1.7e-07 Score=69.82 Aligned_cols=50 Identities=20% Similarity=0.360 Sum_probs=42.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
+.+| |+.+|+.||++|++.+.+. +++ .+.+++||.|++|+|+.|++...+
T Consensus 43 ~~~h-H~~~E~~~Vl~G~~~~~i~--~g~--~~~l~~GD~i~ip~g~~H~~~n~~ 92 (101)
T 1o5u_A 43 FDWY-YDTNETCYILEGKVEVTTE--DGK--KYVIEKGDLVTFPKGLRCRWKVLE 92 (101)
T ss_dssp EEEE-CSSCEEEEEEEEEEEEEET--TCC--EEEEETTCEEEECTTCEEEEEEEE
T ss_pred cccc-CCceEEEEEEeCEEEEEEC--CCC--EEEECCCCEEEECCCCcEEEEeCC
Confidence 3467 8899999999999999994 244 368999999999999999987643
No 37
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.58 E-value=2e-07 Score=76.96 Aligned_cols=57 Identities=25% Similarity=0.299 Sum_probs=48.4
Q ss_pred ccccccccCcceEEEEEeceEEEEEEeCC---CcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 93 NFFEEHLHTDEEIRYCVAGSGYFDVRDRN---EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 93 ~f~~eH~H~ddEvr~il~G~g~f~v~~~~---d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
..+.+|.|+.+|.+|+++|++...+++.+ .+...|.+++||+++||+|++|+-...+
T Consensus 45 ~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 45 ERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp CCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred cCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 45899988899999999999999999632 1455799999999999999999985544
No 38
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.58 E-value=1.2e-07 Score=84.01 Aligned_cols=77 Identities=19% Similarity=0.217 Sum_probs=60.8
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcE
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~ 153 (199)
.-.+++.|.. ....|.|..+|+.||++|++.+.+.+.+++.+...+++||++++|+|+.|++....+ .+
T Consensus 81 ~~~~~l~pg~----------~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~ 149 (385)
T 1j58_A 81 SVNMRLKPGA----------IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GA 149 (385)
T ss_dssp EEEEEECTTC----------EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EE
T ss_pred EEEEEECCCC----------CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CE
Confidence 3456666653 367899999999999999999999876677655689999999999999999976543 35
Q ss_pred EEEEEecC
Q 029096 154 KAMRLFVG 161 (199)
Q Consensus 154 ~alRlF~~ 161 (199)
..+-+|..
T Consensus 150 ~~~~v~~~ 157 (385)
T 1j58_A 150 EFLLVFDD 157 (385)
T ss_dssp EEEEEESC
T ss_pred EEEEEECC
Confidence 56655654
No 39
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.56 E-value=2.5e-07 Score=74.77 Aligned_cols=75 Identities=12% Similarity=0.216 Sum_probs=56.9
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCC-C
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-N 151 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~-~ 151 (199)
.-.+++.|.. ....| |.. +|+.||++|++.+.+.+.++.. ...+++||++++|+|+.|++....+ .
T Consensus 43 ~~~~~l~pg~----------~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~-~~~l~~GDv~~~P~g~~H~~~N~g~~~ 110 (178)
T 1dgw_A 43 VLEYCSKPNT----------LLLPH-HSDSDLLVLVLEGQAILVLVNPDGRD-TYKLDQGDAIKIQAGTPFYLINPDNNQ 110 (178)
T ss_dssp EEEEEECTTE----------EEEEE-EESSEEEEEEEESEEEEEEEETTEEE-EEEEETTEEEEECTTCCEEEEECCSSS
T ss_pred EEEEEecCCc----------EecCc-CCCCCEEEEEEeEEEEEEEEeCCCcE-EEEECCCCEEEECCCCeEEEEeCCCCC
Confidence 4556677653 35789 654 9999999999999997555433 5689999999999999999976544 3
Q ss_pred cEEEEEEec
Q 029096 152 YIKAMRLFV 160 (199)
Q Consensus 152 ~~~alRlF~ 160 (199)
.+..+-++.
T Consensus 111 ~l~~l~v~~ 119 (178)
T 1dgw_A 111 NLRILKFAI 119 (178)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEC
Confidence 566665543
No 40
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.56 E-value=1.3e-07 Score=78.78 Aligned_cols=72 Identities=11% Similarity=0.265 Sum_probs=57.3
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
..-++++.++ ....+|.|+.+|+.||++|++.|.+. |+ ...+++||+|.+|+|+.|.+...++
T Consensus 38 ~~~~~~~~~G----------~~~~~h~h~~~~~~~Vl~G~~~~~i~---~~--~~~l~~Gd~~~~p~~~~H~~~a~~~-- 100 (227)
T 3rns_A 38 YISLFSLAKD----------EEITAEAMLGNRYYYCFNGNGEIFIE---NN--KKTISNGDFLEITANHNYSIEARDN-- 100 (227)
T ss_dssp EEEEEEECTT----------CEEEECSCSSCEEEEEEESEEEEEES---SC--EEEEETTEEEEECSSCCEEEEESSS--
T ss_pred EEEEEEECCC----------CccCccccCCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEECCC--
Confidence 4456666655 34789999999999999999999995 44 3689999999999999999988665
Q ss_pred EEEEEEecC
Q 029096 153 IKAMRLFVG 161 (199)
Q Consensus 153 ~~alRlF~~ 161 (199)
++.+-++..
T Consensus 101 ~~~l~i~~~ 109 (227)
T 3rns_A 101 LKLIEIGEK 109 (227)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEee
Confidence 555555443
No 41
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.55 E-value=1.4e-07 Score=76.43 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=48.9
Q ss_pred ccccccCc-ceEEEEEe--ceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 95 FEEHLHTD-EEIRYCVA--GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~--G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
...|.|.. +|++|||+ |+|.|.+. +++ +.+++||+|+||+|+.|++. + .++.|-++.++
T Consensus 58 ~~~H~H~~~~E~~yVLe~~G~g~v~id---ge~--~~l~~GD~v~IPpg~~H~i~-g---~l~~L~I~~Pp 119 (157)
T 4h7l_A 58 ARTHYHREHQEIYVVLDHAAHATIELN---GQS--YPLTKLLAISIPPLVRHRIV-G---EATIINIVSPP 119 (157)
T ss_dssp CCCBBCSSCEEEEEEEEECTTCEEEET---TEE--EECCTTEEEEECTTCCEEEE-S---CEEEEEEEESS
T ss_pred ccceECCCCcEEEEEEecCcEEEEEEC---CEE--EEeCCCCEEEECCCCeEeeE-C---CEEEEEEECCC
Confidence 47899975 79999999 99999994 553 68999999999999999996 2 46777666643
No 42
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.54 E-value=2.8e-07 Score=73.93 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=48.0
Q ss_pred ccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec-CCCcEEEEEE
Q 029096 97 EHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDNYIKAMRL 158 (199)
Q Consensus 97 eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~-~~~~~~alRl 158 (199)
+|.|..+|+.||++|++.+.+.+ ++..-...+++||.|.+|+|+.|++... .+..++.+-+
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAV 196 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEEE
Confidence 79999999999999999999963 1111247899999999999999999875 5444555544
No 43
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.53 E-value=3e-07 Score=70.18 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=46.9
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEE
Q 029096 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (199)
Q Consensus 95 ~~eH~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~al 156 (199)
...|.|. .+|+.||++|++.+.+. ++ ...+++||++.+|+|+.|++....+..+..+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDN---GK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEEC---CE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEE
Confidence 4689998 59999999999999984 44 3679999999999999999987555444444
No 44
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.53 E-value=1.4e-07 Score=68.13 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=46.4
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEE
Q 029096 95 FEEHLHTDE-EIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (199)
Q Consensus 95 ~~eH~H~dd-Evr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~al 156 (199)
..+|.|..+ |+.||++|++.+.+. ++ + ...+.+||.|.+|+|+.|++....+..++.+
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~--~g~~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETP--EGSV--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEET--TEEE--EEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeC--CCCE--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 458999986 699999999999985 22 3 4689999999999999999986555444444
No 45
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.52 E-value=2.5e-07 Score=77.66 Aligned_cols=63 Identities=19% Similarity=0.215 Sum_probs=54.9
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
...|.|..+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+..+..+-+|.+.
T Consensus 159 ~~~H~H~~~e~~~Vl~G~~~~~i~---~~~--~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 159 MPFHKHRNEQIGICIGGGYDMTVE---GCT--VEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp EEEECCSSEEEEEECSSCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred CCCEeCCCcEEEEEEECEEEEEEC---CEE--EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 568999999999999999999985 454 579999999999999999998777778888888853
No 46
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.52 E-value=2.3e-07 Score=69.37 Aligned_cols=81 Identities=15% Similarity=0.201 Sum_probs=56.6
Q ss_pred HHHhcCCCeeeeEEECCCCCCChHHHHhcccc-ccccCcc-eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCc
Q 029096 65 IREDRGYSYMDFCEVCPEKLPNYEEKIKNFFE-EHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCY 142 (199)
Q Consensus 65 l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~-eH~H~dd-Evr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~ 142 (199)
+....++. .-++++.|.. ... .|.|... +++||++|++.+.+. ++ ...+++||+|.||+|+.
T Consensus 20 ~~~~~~~~-~~~~~~~pg~----------~~~~~H~H~~~e~~~~vl~G~~~~~i~---~~--~~~l~~Gd~i~i~~~~~ 83 (125)
T 3cew_A 20 SLALTGAE-VSINHLPAGA----------GVPFVHSHKQNEEIYGILSGKGFITID---GE--KIELQAGDWLRIAPDGK 83 (125)
T ss_dssp HHTCSSCE-EEEEEECTTC----------BCSSEEEESSEEEEEEEEEEEEEEEET---TE--EEEEETTEEEEECTTCC
T ss_pred ccCCCCcE-EEEEEECCCC----------CCCCCccCCCceEEEEEEeCEEEEEEC---CE--EEEeCCCCEEEECCCCc
Confidence 33344443 3445666653 234 7999985 566699999999994 44 46899999999999999
Q ss_pred eeeeecCCCcEEEEEEecC
Q 029096 143 HRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 143 HrF~~~~~~~~~alRlF~~ 161 (199)
|++....+..+..+-++.+
T Consensus 84 H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 84 RQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp EEEEEBTTBCEEEEEEEEE
T ss_pred EEEEcCCCCCEEEEEEEcC
Confidence 9998765544555555443
No 47
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.50 E-value=5.7e-07 Score=78.19 Aligned_cols=73 Identities=12% Similarity=0.279 Sum_probs=58.5
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcE
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~ 153 (199)
.-++++.|... .---|+|..++..|||+|+|.+.+ +++| +.+++||+|.+|+|..|+|....+..+
T Consensus 188 ~~~~t~~PG~~---------~p~~e~H~~eh~~~vL~G~g~y~l---~~~~--~~V~~GD~i~~~~~~~h~~~n~G~e~~ 253 (266)
T 4e2q_A 188 IHTMDFQPGEF---------LNVKEVHYNQHGLLLLEGQGIYRL---GDNW--YPVQAGDVIWMAPFVPQWYAALGKTRS 253 (266)
T ss_dssp EEEEEECTTCB---------CSSCCCCSCCEEEEEEECEEEEEE---TTEE--EEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred EEEEEECCCcC---------cCCceEcccceEEEEEeceEEEEE---CCEE--EEecCCCEEEECCCCcEEEEeCCCCCE
Confidence 35777887741 123588999999999999999998 4778 579999999999999999987766667
Q ss_pred EEEEEecC
Q 029096 154 KAMRLFVG 161 (199)
Q Consensus 154 ~alRlF~~ 161 (199)
+-| ||++
T Consensus 254 ~yl-~ykd 260 (266)
T 4e2q_A 254 RYL-LYKD 260 (266)
T ss_dssp EEE-EEEE
T ss_pred EEE-EEcc
Confidence 766 5554
No 48
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.50 E-value=7.9e-07 Score=82.80 Aligned_cols=71 Identities=14% Similarity=0.280 Sum_probs=57.7
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEe-cCCCc
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF-VGDPV 164 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF-~~~~g 164 (199)
.....|+|+. +|+.||++|++.+.+.+.++ +++...+++||+++||+|+.|++..+ +..+..+-|+ ...++
T Consensus 349 a~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng-~~~l~~l~f~~s~~p~ 422 (476)
T 1fxz_A 349 AMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ-SDNFEYVSFKTNDTPM 422 (476)
T ss_dssp CEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-STTEEEEEEESSSSCC
T ss_pred ceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC-CCCEEEEEEECCCCCc
Confidence 3478999995 89999999999999986543 56667799999999999999999885 5567777777 34444
No 49
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.49 E-value=3.9e-07 Score=73.00 Aligned_cols=59 Identities=15% Similarity=0.127 Sum_probs=47.3
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEec
Q 029096 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 96 ~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~ 160 (199)
..|.|..+|+.||++|++.+.+. ++. ..+++||.|.+|+|+.|++....+... .+-++.
T Consensus 120 ~~H~h~~~E~~~Vl~G~~~~~~~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~ 178 (192)
T 1y9q_A 120 SPHALGVIEYIHVLEGIMKVFFD---EQW--HELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVA 178 (192)
T ss_dssp CCCSTTCEEEEEEEESCEEEEET---TEE--EEECTTCEEEEECSSSEEEEESSSCEE-EEEEEE
T ss_pred CCCCCCCEEEEEEEEeEEEEEEC---CEE--EEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEe
Confidence 37888889999999999999984 553 689999999999999999987554444 444443
No 50
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.49 E-value=5.1e-07 Score=84.44 Aligned_cols=73 Identities=12% Similarity=0.194 Sum_probs=58.5
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC-CCceee
Q 029096 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG-DPVWTP 167 (199)
Q Consensus 94 f~~eH~H~d-dEvr~il~G~g~f~v~~~~-d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~-~~gW~~ 167 (199)
....|+|+. +|+.||++|++.+.+.+.+ .+++...+++||+++||+|+.|+...+. ..+..|-+|+. .++-..
T Consensus 379 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ts~~p~~~~ 454 (493)
T 2d5f_A 379 IYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFKTHHNAVSSY 454 (493)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSTTCCEEE
T ss_pred eeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEECCCCCccee
Confidence 478999995 8999999999999998665 4566677999999999999999987654 45778878743 455443
No 51
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.47 E-value=6.5e-07 Score=79.24 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=55.1
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
...|.|.. +|+.||++|++.+.+.+.+++-..+.+++||.+++|+|+.|++....+..+..+-++..
T Consensus 270 ~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 270 RELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred cCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 45799999 99999999999999975554323578999999999999999998766666777777764
No 52
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.46 E-value=4.6e-07 Score=75.37 Aligned_cols=59 Identities=25% Similarity=0.348 Sum_probs=48.1
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
...+|.|+.+|+.||++|++.+.+. +++ ..+++||.|.+|+|+.|++..+ ...++++-.
T Consensus 165 ~~~~H~H~~~e~~~Vl~G~~~~~i~---g~~--~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~ 223 (227)
T 3rns_A 165 SLDPHKAPGDALVTVLDGEGKYYVD---GKP--FIVKKGESAVLPANIPHAVEAE-TENFKMLLI 223 (227)
T ss_dssp EEEEECCSSEEEEEEEEEEEEEEET---TEE--EEEETTEEEEECTTSCEEEECC-SSCEEEEEE
T ss_pred ccCCEECCCcEEEEEEeEEEEEEEC---CEE--EEECCCCEEEECCCCcEEEEeC-CCCEEEEEE
Confidence 3679999999999999999999984 553 6899999999999999999883 223555433
No 53
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.46 E-value=4.5e-07 Score=83.68 Aligned_cols=78 Identities=9% Similarity=0.142 Sum_probs=61.8
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC-CC
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DN 151 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~-~~ 151 (199)
..-.++|.|.. +...|.|..+|+.||++|+|.+.+-+.++. ....+++||++++|+|+.||+.... +.
T Consensus 87 s~~~~~l~Pgg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~ 155 (445)
T 2cav_A 87 RVLEYCSKPNT----------LLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQ 155 (445)
T ss_dssp EEEEEEECSSE----------EEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSC
T ss_pred EEEEEEECCCc----------CccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCC
Confidence 34556777764 467896667999999999999999755544 4678999999999999999997764 56
Q ss_pred cEEEEEEecC
Q 029096 152 YIKAMRLFVG 161 (199)
Q Consensus 152 ~~~alRlF~~ 161 (199)
.++.+-+|..
T Consensus 156 ~l~~l~v~~~ 165 (445)
T 2cav_A 156 NLRILKFAIT 165 (445)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEecc
Confidence 6888877764
No 54
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.46 E-value=8.3e-07 Score=83.46 Aligned_cols=72 Identities=18% Similarity=0.269 Sum_probs=58.2
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEec-CCCce
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV-GDPVW 165 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~-~~~gW 165 (199)
.....|+|+. +|+.||++|++.+.|.+.++ +.+...+++||+++||+|+.|++..+ +..+..+-|++ ..++-
T Consensus 383 ~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng-~e~l~~l~f~~s~~p~~ 457 (510)
T 3c3v_A 383 ALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQ-SDNFEYVAFKTDSRPSI 457 (510)
T ss_dssp CEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSSSCCE
T ss_pred ceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeC-CCCEEEEEEECCCCcce
Confidence 3478999995 89999999999999986653 56666799999999999999999885 55677777773 34543
No 55
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.45 E-value=7.9e-07 Score=75.92 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=48.7
Q ss_pred ccc-cccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCC-CcEEEEEE
Q 029096 95 FEE-HLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKAMRL 158 (199)
Q Consensus 95 ~~e-H~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~-~~~~alRl 158 (199)
... |.|..+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+ ..++.+-+
T Consensus 195 ~~~~H~H~~~E~~yVl~G~~~~~i~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~ 255 (274)
T 1sef_A 195 HAYIETHVQEHGAYLISGQGMYNLD---NEW--YPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYS 255 (274)
T ss_dssp CSSCBCCSCCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred cCcceeccCeEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCCEEEEEE
Confidence 355 999999999999999999994 565 679999999999999999987655 55555533
No 56
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.42 E-value=7e-07 Score=79.27 Aligned_cols=64 Identities=22% Similarity=0.281 Sum_probs=50.7
Q ss_pred ccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 97 EHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 97 eH~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
.|.|. .+|++||++|++.+.+.+.+++.-.+.+++||.|.+|+|+.|+|....+.. +.+-++.+
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p 129 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVP 129 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEES
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcC
Confidence 79998 699999999999999986344323578999999999999999998755443 55555543
No 57
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.40 E-value=9e-07 Score=76.00 Aligned_cols=62 Identities=26% Similarity=0.480 Sum_probs=51.9
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 95 ~~eH~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
...|.|. .+|+.||++|++.+.+. +++ +.+++||.+.+|+|+.|++....+ ..+.+-+|...
T Consensus 231 ~~~h~H~~~~e~~~vl~G~~~~~i~---~~~--~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~ 293 (337)
T 1y3t_A 231 IVDHYHEYHTETFYCLEGQMTMWTD---GQE--IQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPG 293 (337)
T ss_dssp CCCEECSSCEEEEEEEESCEEEEET---TEE--EEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESS
T ss_pred CCCcCCCCCcEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCc
Confidence 4679999 59999999999999994 554 689999999999999999987665 57777776543
No 58
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.39 E-value=2.6e-07 Score=78.87 Aligned_cols=65 Identities=17% Similarity=0.114 Sum_probs=50.0
Q ss_pred ccccccC-cceEEEEEeceEEEEE--------EeC-------CCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEE-EE
Q 029096 95 FEEHLHT-DEEIRYCVAGSGYFDV--------RDR-------NEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKA-MR 157 (199)
Q Consensus 95 ~~eH~H~-ddEvr~il~G~g~f~v--------~~~-------~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~a-lR 157 (199)
...|.|. .+|++||++|++.+.+ .+. +++...+.+++||++.+|+|+.|.|....+...++ +-
T Consensus 56 ~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~ 135 (239)
T 2xlg_A 56 PMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFV 135 (239)
T ss_dssp CCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEE
T ss_pred CCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 4789999 5899999999999999 322 11233578999999999999999998655544565 44
Q ss_pred Ee
Q 029096 158 LF 159 (199)
Q Consensus 158 lF 159 (199)
++
T Consensus 136 ~~ 137 (239)
T 2xlg_A 136 WM 137 (239)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 59
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.39 E-value=6.8e-07 Score=83.22 Aligned_cols=80 Identities=15% Similarity=0.227 Sum_probs=64.3
Q ss_pred CCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcE----------------------EEE
Q 029096 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKW----------------------IRI 127 (199)
Q Consensus 70 gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~----------------------~ri 127 (199)
|+. .-.++|.|.. +...|.|...|+.||++|+|++.+-..++.. ...
T Consensus 47 gvs-~~r~~l~Pgg----------l~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~ 115 (476)
T 1fxz_A 47 GVA-LSRCTLNRNA----------LRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIY 115 (476)
T ss_dssp TCE-EEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEE
T ss_pred ceE-EEEEEEcCCC----------EecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEE
Confidence 774 4446777764 5789999999999999999999998654320 125
Q ss_pred EEecCCEEEeCCCCceeeeecCCCcEEEEEEec
Q 029096 128 WVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 128 ~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~ 160 (199)
.+++||+|.||+|+.||+..+.+..+.++-+|.
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d 148 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSIID 148 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEEC
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEEec
Confidence 799999999999999999877777788888886
No 60
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.39 E-value=5.7e-07 Score=81.52 Aligned_cols=58 Identities=28% Similarity=0.531 Sum_probs=48.6
Q ss_pred ccccccCcceEEEEEeceEE-EEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEE
Q 029096 95 FEEHLHTDEEIRYCVAGSGY-FDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMR 157 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~-f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alR 157 (199)
...|.|..+|++||++|+|. +.| |++ ++.+++||+|++|+|..|.+..+.+..+..+-
T Consensus 116 ~~~HrH~~~ev~~VleG~G~~~~v---dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 116 APEHRHSQNAFRFVVEGEGVWTVV---NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp EEEEEESSCEEEECSSCEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred cCceecccceEEEEEecceEEEEE---CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 67899999999999999995 655 454 68999999999999999999886666666543
No 61
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.38 E-value=8.6e-07 Score=81.03 Aligned_cols=77 Identities=12% Similarity=0.178 Sum_probs=61.1
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec-CCC
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD-TDN 151 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~-~~~ 151 (199)
..-.++|.|.. +...|.|..+|+.||++|+|.+.+-+. +.-....+++||+++||+|+.||+... .+.
T Consensus 50 s~~~~~l~PGg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPNT----------ILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccCc----------CcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 45677788764 468895556999999999999999644 333467899999999999999999876 466
Q ss_pred cEEEEEEec
Q 029096 152 YIKAMRLFV 160 (199)
Q Consensus 152 ~~~alRlF~ 160 (199)
.+++|-++.
T Consensus 119 ~l~~l~~~~ 127 (416)
T 1uij_A 119 NLKMIWLAI 127 (416)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEec
Confidence 788877774
No 62
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.37 E-value=1.1e-06 Score=77.18 Aligned_cols=54 Identities=22% Similarity=0.322 Sum_probs=47.2
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
+.+| |++ ||.+|+++|.+...+++ +++.-.|.+.+||+++||+|++|+....++
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 6899 876 99999999999999995 355567999999999999999999877555
No 63
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.35 E-value=1.3e-06 Score=80.43 Aligned_cols=77 Identities=10% Similarity=0.179 Sum_probs=59.8
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC-CC
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DN 151 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~-~~ 151 (199)
..-.++|.|.. +...|.|..+|+.||++|+|.+.+-+. +......+++||++++|+|+.||+.... +.
T Consensus 62 s~~~~~l~PGg----------~~~pHh~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 62 RVVEFKSKPNT----------LLLPHHADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEecCCc----------CccCccCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 44667788764 468894456999999999999999753 3344678999999999999999998654 55
Q ss_pred cEEEEEEec
Q 029096 152 YIKAMRLFV 160 (199)
Q Consensus 152 ~~~alRlF~ 160 (199)
.+.++-+|.
T Consensus 131 ~l~~l~~~~ 139 (434)
T 2ea7_A 131 NLRIIKLAI 139 (434)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEec
Confidence 677776663
No 64
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.35 E-value=9.7e-07 Score=75.79 Aligned_cols=61 Identities=18% Similarity=0.325 Sum_probs=50.4
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 95 ~~eH~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
...|.|. .+|++||++|++.+.+. ++ ...+++||+|.+|+|+.|.+....++ .+.+-++.+
T Consensus 59 ~~~h~H~~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p 120 (337)
T 1y3t_A 59 FPLHVHKDTHEGILVLDGKLELTLD---GE--RYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMK 120 (337)
T ss_dssp EEEEECTTCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEET
T ss_pred CCceeCCCceEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECC
Confidence 5689999 79999999999999984 44 36899999999999999999876553 666656544
No 65
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.34 E-value=9.6e-07 Score=82.23 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=64.3
Q ss_pred CCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCC-cEE-----------------------
Q 029096 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-KWI----------------------- 125 (199)
Q Consensus 70 gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d-~~~----------------------- 125 (199)
|+.. =-++|.|.. +...|+|...|+.||++|+|++.+-..+. +.+
T Consensus 49 gvs~-~R~~i~P~g----------l~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~ 117 (465)
T 3qac_A 49 GVSV-IRRTIEPHG----------LLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKF 117 (465)
T ss_dssp TCEE-EEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----------------------
T ss_pred ceEE-EEEEEcCCc----------CcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccc
Confidence 7754 446677764 57899998899999999999999874431 211
Q ss_pred -------------EEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 126 -------------RIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 126 -------------ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
...+++||+|+||+|+.||+..+.+..+.++-+|..
T Consensus 118 ~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~ 166 (465)
T 3qac_A 118 GMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDT 166 (465)
T ss_dssp -------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECT
T ss_pred ccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcC
Confidence 247899999999999999998877778999988865
No 66
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.34 E-value=1.2e-06 Score=81.93 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=64.5
Q ss_pred cCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCC--------------------------
Q 029096 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-------------------------- 122 (199)
Q Consensus 69 ~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d-------------------------- 122 (199)
.|+ ..-.++|.|.. +...|.|+..++.||++|+|++.+-..+.
T Consensus 43 ~gv-~~~r~~i~pgg----------l~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~ 111 (493)
T 2d5f_A 43 AGV-TVSKRTLNRNG----------LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSH 111 (493)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEE
T ss_pred CCE-EEEEEEeCCCc----------EeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 465 45667888775 46899999999999999999999974331
Q ss_pred cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 123 KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 123 ~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
..+ ..+++||+|+||||+.||+..+.+..+.+|-+|..
T Consensus 112 qkv-~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~ 149 (493)
T 2d5f_A 112 QKI-RHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDT 149 (493)
T ss_dssp SCE-EEEETTEEEEECTTCCEEEEECSSSCEEEEEEECT
T ss_pred ceE-EEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 112 37999999999999999998877777888888763
No 67
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.33 E-value=1e-06 Score=81.71 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=63.3
Q ss_pred CCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc-EE--------------------EEE
Q 029096 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WI--------------------RIW 128 (199)
Q Consensus 70 gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~-~~--------------------ri~ 128 (199)
|. ..-.++|.|.. +...|+|...|+.||++|+|++.+-..++. .+ ...
T Consensus 62 gv-s~~r~~i~pgg----------l~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~ 130 (459)
T 2e9q_A 62 GV-NMIRHTIRPKG----------LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRP 130 (459)
T ss_dssp TE-EEEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEE
T ss_pred ce-EEEEEEEcCCC----------EecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEE
Confidence 55 33447787764 578999999999999999999999644321 11 247
Q ss_pred EecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 129 VKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 129 ~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
+++||+|+||+|+.||+..+.+..+.++-+|..
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~ 163 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFADT 163 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEecC
Confidence 999999999999999998777777888878763
No 68
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.33 E-value=2.7e-06 Score=80.33 Aligned_cols=73 Identities=11% Similarity=0.227 Sum_probs=57.2
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEec-CCCcee
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV-GDPVWT 166 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~-~~~gW~ 166 (199)
.....|+|+. .|+.||++|++++.+-+.++ +++...+++||+++||+|+.|....+ ++.+..+-|.+ ..++-.
T Consensus 405 gm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~ss~np~~~ 480 (531)
T 3fz3_A 405 GIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFKTEENAFIN 480 (531)
T ss_dssp CEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSTTCCEE
T ss_pred ccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEecCCCCcce
Confidence 3478999997 89999999999999987654 56788999999999999999977665 44566664444 345543
No 69
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.33 E-value=6.8e-07 Score=68.90 Aligned_cols=66 Identities=18% Similarity=0.212 Sum_probs=50.9
Q ss_pred CCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 70 gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
|-...-+..+.|.. +.+|.|..+|..|||+|++.+.+. +++ .+.+++||.+++|+|+.|++...+
T Consensus 47 g~~~~g~w~~~pG~-----------~~~~~~~~~E~~~Vl~G~~~l~~~--~g~--~~~l~~GD~~~ip~g~~h~~~~~~ 111 (123)
T 3bcw_A 47 GKVESGVWESTSGS-----------FQSNTTGYIEYCHIIEGEARLVDP--DGT--VHAVKAGDAFIMPEGYTGRWEVDR 111 (123)
T ss_dssp TTEEEEEEEEEEEE-----------EECCCTTEEEEEEEEEEEEEEECT--TCC--EEEEETTCEEEECTTCCCEEEEEE
T ss_pred CCEEEEEEEECCCc-----------eeeEcCCCcEEEEEEEEEEEEEEC--CCe--EEEECCCCEEEECCCCeEEEEECC
Confidence 44555666666543 456777669999999999999984 344 368999999999999999998754
Q ss_pred C
Q 029096 150 D 150 (199)
Q Consensus 150 ~ 150 (199)
.
T Consensus 112 ~ 112 (123)
T 3bcw_A 112 H 112 (123)
T ss_dssp E
T ss_pred c
Confidence 3
No 70
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.32 E-value=3.1e-06 Score=71.34 Aligned_cols=73 Identities=19% Similarity=0.309 Sum_probs=55.8
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcE
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~ 153 (199)
.-++++.|.. ..-..|.|..+|..|||+|++.|.+ +++| +.+++||.|.+++|..|+|....+..+
T Consensus 167 ~~~~tl~PG~---------~~~~~~~h~~ee~~~vLeG~~~~~~---~~~~--~~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 167 VSTMSFAPGA---------SLPYAEVHYMEHGLLMLEGEGLYKL---EENY--YPVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp EEEEEECTTC---------BCSSCBCCSSCEEEEEEECEEEEEE---TTEE--EEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred EEEEEECCCC---------ccCcccCCCceEEEEEEECEEEEEE---CCEE--EEcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 4567777764 1122367889999999999999999 4777 579999999999999999987665555
Q ss_pred EEEEEecC
Q 029096 154 KAMRLFVG 161 (199)
Q Consensus 154 ~alRlF~~ 161 (199)
+.| ++++
T Consensus 233 ~yl-~~kd 239 (246)
T 1sfn_A 233 KYL-LYKD 239 (246)
T ss_dssp EEE-EEEE
T ss_pred EEE-EEEe
Confidence 544 4443
No 71
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.31 E-value=2.4e-06 Score=72.17 Aligned_cols=57 Identities=21% Similarity=0.243 Sum_probs=45.4
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCC-CcEEEE
Q 029096 95 FEEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD-NYIKAM 156 (199)
Q Consensus 95 ~~eH~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~-~~~~al 156 (199)
...|.|. .+|+.||++|++.+.+. +++ +.+++||.|.+|+|+.|++....+ ..++.+
T Consensus 192 ~~~h~H~~~~E~~~Vl~G~~~~~i~---~~~--~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 192 HGYIETHVQEHGAYILSGQGVYNLD---NNW--IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp BEEEEEESSCEEEEEEESEEEEESS---SCE--EEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred cCcccCCCceEEEEEEEeEEEEEEC---CEE--EEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4678885 58999999999999985 555 689999999999999999987555 555555
No 72
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.30 E-value=2e-06 Score=69.02 Aligned_cols=60 Identities=18% Similarity=0.453 Sum_probs=44.2
Q ss_pred cCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCceee
Q 029096 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTP 167 (199)
Q Consensus 100 H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~~ 167 (199)
|..+|+.|||+|++.+.+ +++ .+.+++||.|.||+|+.|+|... ...+.+-+.. +++|..
T Consensus 82 ~~~eE~~yVLeG~~~l~i---~g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~~-P~~~~~ 141 (151)
T 4axo_A 82 LNYDEIDYVIDGTLDIII---DGR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVTY-PADWAS 141 (151)
T ss_dssp CSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEEE-CSCC--
T ss_pred CCCcEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEEC-CCCccc
Confidence 567999999999999988 355 47899999999999999999875 2344443332 344544
No 73
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.30 E-value=9.2e-07 Score=78.89 Aligned_cols=60 Identities=23% Similarity=0.368 Sum_probs=49.3
Q ss_pred cccccccCcceEEEEEeceEEE-EEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYF-DVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f-~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
....|.|..+|++||++|+|.| .| +++ ++.+++||+|++|+|+.|++....+..+..+-+
T Consensus 112 ~~~~H~H~~~e~~yVl~G~g~~t~v---~g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 112 VAPSHRHNQSALRFIVEGKGAFTAV---DGE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp EEEEEEESSCEEEEEEECSSCEEEE---TTE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CcCCeecCcceEEEEEEEEEEEEEE---CCE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 3568999999999999999998 66 354 478999999999999999998765555666655
No 74
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.29 E-value=1.6e-06 Score=81.46 Aligned_cols=82 Identities=16% Similarity=0.171 Sum_probs=65.1
Q ss_pred cCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc-------------------------
Q 029096 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK------------------------- 123 (199)
Q Consensus 69 ~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~------------------------- 123 (199)
.|+. .=.++|.|.. +...|+|...|+.||++|+|++.+-..++.
T Consensus 46 ~gvs-~~r~~i~p~g----------l~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 46 AGVA-LSRLVLRRNA----------LRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp HTCE-EEEEEECTTE----------EEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred CcEE-EEEEEECCCC----------CccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 3774 4567777764 578999999999999999999999865420
Q ss_pred --E--------EEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 124 --W--------IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 124 --~--------~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
. ....+++||+|+||+|+.||+..+.+..+.+|-+|..
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~ 162 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDT 162 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCC
Confidence 0 0147999999999999999998777777888888854
No 75
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.28 E-value=2.1e-06 Score=78.30 Aligned_cols=60 Identities=22% Similarity=0.243 Sum_probs=48.7
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC-CCcEEEEEE
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT-DNYIKAMRL 158 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~-~~~~~alRl 158 (199)
-...|.|..+|++||++|+|++.|. ++ ++.+++||+|+||+|..|.+.... +..+..+.+
T Consensus 306 ~~~~HrH~~~~v~~VleG~G~~~V~---ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 306 HTKAHRHTGNVIYNVAKGQGYSIVG---GK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp BCCCEEESSCEEEEEEECCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred cCCCcccCCcEEEEEEeCeEEEEEC---CE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 3678999999999999999998884 44 589999999999999999997654 344444443
No 76
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.26 E-value=2.3e-06 Score=78.07 Aligned_cols=78 Identities=13% Similarity=0.182 Sum_probs=64.0
Q ss_pred CCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCE------EEeCCCCcee
Q 029096 71 YSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM------IVLPAGCYHR 144 (199)
Q Consensus 71 Y~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDl------I~vPaG~~Hr 144 (199)
| +.-.+++.|.. +...|.|..+|+.||++|+|+..+-+.++.. ...+++||+ ++||+|+.||
T Consensus 52 ~-s~~~~~l~pgg----------~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~-~~~l~~GDv~~~~~~~~iP~G~~h~ 119 (397)
T 2phl_A 52 Y-RLVEFRSKPET----------LLLPQQADAELLLVVRSGSAILVLVKPDDRR-EYFFLTSDNPIFSDHQKIPAGTIFY 119 (397)
T ss_dssp C-EEEEEEECSSE----------EEEEEEESEEEEEEEEESEEEEEEEETTTEE-EEEEEESSCTTSCSEEEECTTCEEE
T ss_pred E-EEEEEEECCCc----------CccCEecCCCeEEEEEeeeEEEEEEeCCCcE-EEEECCCCcccccceEEECCCCcEE
Confidence 5 44677788764 4578889889999999999999998776664 578999999 9999999999
Q ss_pred eeecC-CCcEEEEEEec
Q 029096 145 FTLDT-DNYIKAMRLFV 160 (199)
Q Consensus 145 F~~~~-~~~~~alRlF~ 160 (199)
+.... +..+.++-+|.
T Consensus 120 ~~N~g~~~~l~~i~~~~ 136 (397)
T 2phl_A 120 LVNPDPKEDLRIIQLAM 136 (397)
T ss_dssp EEECCSSCCEEEEEEEE
T ss_pred EEeCCCCCCeEEEEeec
Confidence 96544 66788888875
No 77
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.25 E-value=1.7e-06 Score=72.47 Aligned_cols=60 Identities=22% Similarity=0.216 Sum_probs=48.9
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEE-EeCCCCceeeeecCCCcEEEEEE
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMI-VLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI-~vPaG~~HrF~~~~~~~~~alRl 158 (199)
...+|.|+.+|+.||++|++.+.+. ++ ...+.+||.| ++|+|+.|++....+.....+-+
T Consensus 46 ~~~~H~H~~~e~~~Vl~G~~~~~~~---~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 46 NVEPHQHKEVQIGMVVSGELMMTVG---DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEET---TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ccCCEECCCcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 3579999999999999999999984 44 3689999999 59999999998766544555544
No 78
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.23 E-value=4.7e-06 Score=76.03 Aligned_cols=58 Identities=17% Similarity=0.371 Sum_probs=48.5
Q ss_pred cccccccCcceEEEEEeceEEE-EEEeCCCcEEEEEEecCCEEEeCCCCceeeee-cCCCcEEEE
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYF-DVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL-DTDNYIKAM 156 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f-~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~-~~~~~~~al 156 (199)
-...|.|..+|++|||+|+|.| .+ +++ ++.+++||+|++|+|..|.... ..+..+..|
T Consensus 135 ~~~~HrH~~~ev~~IleG~G~~t~v---~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 135 RAGAHRHAASALRFIMEGSGAYTIV---DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp BCCCEEESSCEEEEEEECSCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred CcCCccCCcceEEEEEEeeEEEEEE---CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 3678999999999999999977 55 455 5889999999999999999987 655556555
No 79
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.23 E-value=2.8e-06 Score=64.72 Aligned_cols=49 Identities=12% Similarity=0.292 Sum_probs=43.3
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 96 ~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
..|.|+.-|+.||++|+|.+.+. ++ ...+++||+++||+|+.|.+....
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~---~~--~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQ---GR--EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEET---TE--EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEEC---CE--EEEecCCeEEEEcCCCCEEEEeCC
Confidence 47899999999999999999994 44 468999999999999999988754
No 80
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.23 E-value=2.2e-06 Score=66.52 Aligned_cols=56 Identities=18% Similarity=0.256 Sum_probs=42.8
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEe
Q 029096 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 96 ~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF 159 (199)
.+|. ..+|+.|||+|++.+.+. ++ .+.+++||.|.+|+|+.|++...+ .++.+-++
T Consensus 70 ~~h~-~~~E~~~VLeG~~~l~~~---g~--~~~l~~GD~i~~p~g~~h~~~~~~--~~~~l~v~ 125 (133)
T 2pyt_A 70 PWTL-NYDEIDMVLEGELHVRHE---GE--TMIAKAGDVMFIPKGSSIEFGTPT--SVRFLYVA 125 (133)
T ss_dssp EEEC-SSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEEE--EEEEEEEE
T ss_pred cccC-CCCEEEEEEECEEEEEEC---CE--EEEECCCcEEEECCCCEEEEEeCC--CEEEEEEE
Confidence 3443 479999999999999984 44 368999999999999999998533 24444443
No 81
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.22 E-value=5.7e-06 Score=75.59 Aligned_cols=68 Identities=12% Similarity=0.168 Sum_probs=55.6
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC--------------cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEE
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE--------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMR 157 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d--------------~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alR 157 (199)
.....|+|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..|+...+ + .+..+-
T Consensus 260 ~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~-~-~~~~l~ 337 (416)
T 1uij_A 260 ALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT-S-NLNFLA 337 (416)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES-S-SEEEEE
T ss_pred cEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC-C-CeEEEE
Confidence 4578999986 79999999999999987655 35555899999999999999999877 3 477787
Q ss_pred EecCC
Q 029096 158 LFVGD 162 (199)
Q Consensus 158 lF~~~ 162 (199)
+|+..
T Consensus 338 f~~~~ 342 (416)
T 1uij_A 338 FGINA 342 (416)
T ss_dssp EEETC
T ss_pred EEcCC
Confidence 77543
No 82
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.20 E-value=7e-06 Score=74.85 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=57.2
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeC------CC-cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDR------NE-KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~------~d-~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
.....|+|+. .|+.||++|+|++.+-+. ++ +.+...+++||+++||+|..|+-.... .+..+-|+...
T Consensus 250 ~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s 325 (397)
T 2phl_A 250 ALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINA 325 (397)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred cEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCC
Confidence 4578999986 799999999999999876 33 688889999999999999999988764 46777676653
No 83
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.19 E-value=3.4e-06 Score=79.05 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=62.9
Q ss_pred cCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCC-CcEE--------------------EE
Q 029096 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN-EKWI--------------------RI 127 (199)
Q Consensus 69 ~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~-d~~~--------------------ri 127 (199)
.|.. .=.++|.|.+ +...|+|...|+.||++|+|++.+-..+ .+.+ .-
T Consensus 44 ~gvs-~~R~~i~pgg----------l~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~ 112 (496)
T 3ksc_A 44 AGVA-LSRATLQRNA----------LRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVN 112 (496)
T ss_dssp HTCE-EEEEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEE
T ss_pred CCce-EEEEEecCCC----------EeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheee
Confidence 4653 3556677654 5789999779999999999999996443 1221 12
Q ss_pred EEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 128 WVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 128 ~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
.+++||+|+||+|+.||...+.+..+.++-+|..
T Consensus 113 ~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~ 146 (496)
T 3ksc_A 113 RFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDI 146 (496)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred ccCCCCEEEECCCCcEEEEcCCCCCEEEEEEecc
Confidence 7899999999999999998877777888887754
No 84
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.18 E-value=4e-06 Score=74.39 Aligned_cols=62 Identities=10% Similarity=0.099 Sum_probs=49.4
Q ss_pred cccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEec
Q 029096 94 FFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~ 160 (199)
....|.|+.+++.||++|++.+.+.+. + ++.+++||.|+||||+.|.|...++ +.+.+-+.+
T Consensus 264 ~~~~h~~~~~~~~~vleG~~~i~i~g~--~--~~~l~~Gd~~~iPag~~h~~~~~~~-~~~~l~~~~ 325 (350)
T 1juh_A 264 TVPTWSFPGACAFQVQEGRVVVQIGDY--A--ATELGSGDVAFIPGGVEFKYYSEAY-FSKVLFVSS 325 (350)
T ss_dssp CCCCBCCSSCEEEEEEESCEEEEETTS--C--CEEECTTCEEEECTTCCEEEEESSS-SEEEEEEEE
T ss_pred CCCcccCCCcEEEEEEeeEEEEEECCe--E--EEEeCCCCEEEECCCCCEEEEecCC-eEEEEEEec
Confidence 467899999999999999999999621 3 3689999999999999999998644 444443333
No 85
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.17 E-value=7.4e-06 Score=76.00 Aligned_cols=85 Identities=12% Similarity=0.149 Sum_probs=64.8
Q ss_pred eEEECCCCCCChHHH----------HhccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCce
Q 029096 76 FCEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 143 (199)
Q Consensus 76 vv~i~p~~~p~~e~~----------~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~H 143 (199)
+..++...+|.+..+ .......|+|.. .|+.||++|++++.|-+.++ +.+.-.+++||+++||+|..|
T Consensus 306 v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 306 ISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 456666666765522 125578999996 79999999999999986654 455556999999999999999
Q ss_pred eeeecCCCcEEEEEEecC
Q 029096 144 RFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 144 rF~~~~~~~~~alRlF~~ 161 (199)
+...+. ..+..+-+|+.
T Consensus 386 ~~~ng~-~~~~~l~~~~s 402 (459)
T 2e9q_A 386 IKRASD-RGFEWIAFKTN 402 (459)
T ss_dssp EEEEEE-EEEEEEEEESS
T ss_pred EEEeCC-CCeEEEEEecC
Confidence 987754 34788878854
No 86
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.17 E-value=1.6e-05 Score=74.62 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=66.4
Q ss_pred EEECCCCCCChHHH----------HhccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCcee
Q 029096 77 CEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHR 144 (199)
Q Consensus 77 v~i~p~~~p~~e~~----------~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~Hr 144 (199)
..++...+|.+..+ .......|+|+. .|+.||++|++++.|-+.++ +++.-.+++||+++||+|..|.
T Consensus 343 ~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~ 422 (496)
T 3ksc_A 343 KTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVA 422 (496)
T ss_dssp EEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred EEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEE
Confidence 34555566766654 235688999987 79999999999999987654 4666679999999999999996
Q ss_pred eeecCCCcEEEEEEecC-CCc
Q 029096 145 FTLDTDNYIKAMRLFVG-DPV 164 (199)
Q Consensus 145 F~~~~~~~~~alRlF~~-~~g 164 (199)
-..+ +..+..+-+|+. .++
T Consensus 423 ~~a~-~e~~~~l~f~~s~np~ 442 (496)
T 3ksc_A 423 AKSL-SDRFSYVAFKTNDRAG 442 (496)
T ss_dssp EEEC-SSEEEEEEEESSTTCC
T ss_pred EEeC-CCCEEEEEEECCCCCc
Confidence 6555 455788888854 344
No 87
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.17 E-value=3.9e-06 Score=72.32 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=45.8
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEE
Q 029096 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (199)
Q Consensus 96 ~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~al 156 (199)
..|.|..+|+.||++|++.+.+. ++ ...+++||.|.+|+|+.|++....+..++.+
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~---g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQ---GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEES---SC--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CCcCCCceEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 46889899999999999999995 44 3689999999999999999986544434433
No 88
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.15 E-value=3.6e-06 Score=68.52 Aligned_cols=52 Identities=12% Similarity=-0.008 Sum_probs=44.2
Q ss_pred cccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 96 EEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 96 ~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
..|.|..+|++|||+|++.+.|. ++ ...+.+||.+.+|+|+.|+|....+..
T Consensus 104 ~~~~h~gEE~~yVLeG~v~vtl~---g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~ 155 (166)
T 2vpv_A 104 LSNSFRTYITFHVIQGIVEVTVC---KN--KFLSVKGSTFQIPAFNEYAIANRGNDE 155 (166)
T ss_dssp EEECCSEEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCEEEEEECSSSC
T ss_pred CccCCCceEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCCEEEEECCCCC
Confidence 44778889999999999999995 44 468999999999999999998766543
No 89
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.15 E-value=3.4e-06 Score=68.89 Aligned_cols=74 Identities=16% Similarity=0.268 Sum_probs=57.6
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcE
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~ 153 (199)
.-++++.|.. -...|.|..+|..|||+|++.+.+. +++ ...+++||.| +|+|+.|++....+...
T Consensus 81 ~~~v~l~PG~----------~~~~H~H~~eE~~~VLeGel~l~ld--~ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~a 145 (172)
T 3es1_A 81 IRVVDMLPGK----------ESPMHRTNSIDYGIVLEGEIELELD--DGA--KRTVRQGGII-VQRGTNHLWRNTTDKPC 145 (172)
T ss_dssp EEEEEECTTC----------BCCCBCCSEEEEEEEEESCEEEECG--GGC--EEEECTTCEE-EECSCCBEEECCSSSCE
T ss_pred EEEEEECCCC----------CCCCeecCceEEEEEEeCEEEEEEC--CCe--EEEECCCCEE-EeCCCcEEEEeCCCCCE
Confidence 3456677664 1468999999999999999999985 244 3679999999 99999999987666567
Q ss_pred EEEEEecCC
Q 029096 154 KAMRLFVGD 162 (199)
Q Consensus 154 ~alRlF~~~ 162 (199)
+++-++.+.
T Consensus 146 r~l~V~~P~ 154 (172)
T 3es1_A 146 RIAFILIEA 154 (172)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEcCC
Confidence 777776654
No 90
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.13 E-value=9.8e-06 Score=75.48 Aligned_cols=85 Identities=12% Similarity=0.167 Sum_probs=66.2
Q ss_pred eEEECCCCCCChHHHH----------hccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCce
Q 029096 76 FCEVCPEKLPNYEEKI----------KNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 143 (199)
Q Consensus 76 vv~i~p~~~p~~e~~~----------~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~H 143 (199)
+..++...+|.+..+- ......|+|+. .|+.||++|+++..+-+.++ +++.-.+++||+++||+|..|
T Consensus 307 v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 386 (466)
T 3kgl_A 307 ISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSV 386 (466)
T ss_dssp EEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeE
Confidence 4556666677655221 25578999987 79999999999999987654 467778999999999999999
Q ss_pred eeeecCCCcEEEEEEecC
Q 029096 144 RFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 144 rF~~~~~~~~~alRlF~~ 161 (199)
.-..+. ..+..+-+|+.
T Consensus 387 ~~~ag~-e~~~~l~~f~s 403 (466)
T 3kgl_A 387 VKRATS-EQFRWIEFKTN 403 (466)
T ss_dssp EEEECS-SEEEEEEEESS
T ss_pred EEEcCC-CCEEEEEEECC
Confidence 876654 44888888875
No 91
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.12 E-value=8.7e-06 Score=74.69 Aligned_cols=66 Identities=12% Similarity=0.270 Sum_probs=53.0
Q ss_pred cccccccCc-ceEEEEEeceEEEEEEeCCC-------------------------cEEEEEEecCCEEEeCCCCceeeee
Q 029096 94 FFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-------------------------KWIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 94 f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-------------------------~~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
....|+|+. .|+.||++|+|++.+-+.++ +.+.-.+++||+++||+|..||...
T Consensus 275 ~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~ 354 (418)
T 3s7i_A 275 LMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINA 354 (418)
T ss_dssp EEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred eeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEEC
Confidence 478899975 89999999999999975543 4667889999999999999999876
Q ss_pred cCCCcEEEEEEecC
Q 029096 148 DTDNYIKAMRLFVG 161 (199)
Q Consensus 148 ~~~~~~~alRlF~~ 161 (199)
+. + +..+-|++.
T Consensus 355 ~~-~-l~~v~f~~~ 366 (418)
T 3s7i_A 355 SS-E-LHLLGFGIN 366 (418)
T ss_dssp SS-C-EEEEEEEES
T ss_pred CC-C-EEEEEEEcC
Confidence 54 3 666655543
No 92
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.08 E-value=1.6e-05 Score=73.98 Aligned_cols=88 Identities=15% Similarity=0.243 Sum_probs=67.5
Q ss_pred eEEECCCCCCChHHH----------HhccccccccCc-ceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCce
Q 029096 76 FCEVCPEKLPNYEEK----------IKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYH 143 (199)
Q Consensus 76 vv~i~p~~~p~~e~~----------~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~H 143 (199)
+..++...+|.+..+ .......|+|+. .|+.||++|++++.|-+.++ +.+.-.+++||+++||+|..|
T Consensus 307 v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 307 LTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 445666667776653 124578899987 79999999999999987653 467777999999999999999
Q ss_pred eeeecCCCcEEEEEEecC-CCc
Q 029096 144 RFTLDTDNYIKAMRLFVG-DPV 164 (199)
Q Consensus 144 rF~~~~~~~~~alRlF~~-~~g 164 (199)
.-..+. ..+..+-+|+. .++
T Consensus 387 ~~~ag~-e~~~~l~f~~s~np~ 407 (465)
T 3qac_A 387 VKQAFE-DGFEWVSFKTSENAM 407 (465)
T ss_dssp EEEEEE-EEEEEEEEESSTTCC
T ss_pred EEEcCC-CCeEEEEEecCCCCc
Confidence 877664 35788878854 344
No 93
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.06 E-value=1.3e-05 Score=73.73 Aligned_cols=68 Identities=10% Similarity=0.147 Sum_probs=54.8
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC-------------cEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE-------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d-------------~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
.....|+|+. .|+.||++|+|++.|-+.++ +.+.-.+++||+++||+|..|+...++ .+..+-|
T Consensus 277 ~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~--~~~~v~f 354 (434)
T 2ea7_A 277 ALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS--NLNFFAF 354 (434)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEE
T ss_pred eeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCC--CeEEEEE
Confidence 4478999986 79999999999999986543 144457999999999999999998773 3777777
Q ss_pred ecCC
Q 029096 159 FVGD 162 (199)
Q Consensus 159 F~~~ 162 (199)
|...
T Consensus 355 ~~~~ 358 (434)
T 2ea7_A 355 GINA 358 (434)
T ss_dssp EETC
T ss_pred ECCC
Confidence 7544
No 94
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.06 E-value=1.2e-05 Score=73.69 Aligned_cols=75 Identities=15% Similarity=0.256 Sum_probs=56.8
Q ss_pred cCCCeeeeEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeee
Q 029096 69 RGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 69 ~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
.+|... .+++.|.. ++..| |.+ +|+.||++|+|+..+-+.++. ....+++||+++||+|+.||...
T Consensus 42 ~~~~l~-~~~l~p~g----------l~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~~-~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 42 QNHRIV-QIEAKPNT----------LVLPK-HADADNILVIQQGQATVTVANGNNR-KSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp TTCEEE-EEEECTTE----------EEEEE-EESEEEEEEEEESEEEEEEECSSCE-EEEEEETTEEEEECTTCEEEEEE
T ss_pred cceEEE-EEEecCCc----------eeeee-eCCCCeEEEEEEeeEEEEEEecCCE-EEEEecCCCEEEECCCCeEEEEe
Confidence 466543 56677654 57778 665 999999999999999866554 45789999999999999999876
Q ss_pred -cCCCcEEEE
Q 029096 148 -DTDNYIKAM 156 (199)
Q Consensus 148 -~~~~~~~al 156 (199)
+.+..+..+
T Consensus 109 ~g~~~~l~i~ 118 (418)
T 3s7i_A 109 RHDNQNLRVA 118 (418)
T ss_dssp CCSSCCEEEE
T ss_pred cCCCccEEEE
Confidence 545444444
No 95
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.03 E-value=3.7e-06 Score=65.92 Aligned_cols=80 Identities=13% Similarity=0.019 Sum_probs=57.1
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
..-++.+.|.. -+..|.|..+|..|||+|+..+..++..+ ...+++||++.+|+|..|.+....+.
T Consensus 45 ~~~~~~~~pG~----------~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e~- 110 (145)
T 2o1q_A 45 WTAIFDCPAGS----------SFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPVA- 110 (145)
T ss_dssp EEEEEEECTTE----------EECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEEE-
T ss_pred EEEEEEECCCC----------CCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCCC-
Confidence 35678888764 36899999988899999998865432211 15789999999999999995333333
Q ss_pred EEEEEEecCCCcee
Q 029096 153 IKAMRLFVGDPVWT 166 (199)
Q Consensus 153 ~~alRlF~~~~gW~ 166 (199)
..++-+|.++-.|+
T Consensus 111 ~~~l~~~~gp~~f~ 124 (145)
T 2o1q_A 111 SEFYMSFLGPLTFV 124 (145)
T ss_dssp EEEEEEEESCEEEE
T ss_pred eEEEEEECCcceec
Confidence 46666777665444
No 96
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.03 E-value=7.9e-06 Score=72.83 Aligned_cols=49 Identities=20% Similarity=0.170 Sum_probs=43.5
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
-..|.|...|++||++|+|++.|. ++ ++.+++||+++||++..|.+..+
T Consensus 281 ~~~H~h~~~ev~~v~~G~g~~~v~---~~--~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 281 SRVARTTDSTIYHVVEGSGQVIIG---NE--TFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp CCCBEESSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEE
T ss_pred CCceecCCcEEEEEEeCeEEEEEC---CE--EEEEcCCCEEEECCCCeEEEEeC
Confidence 456999999999999999999993 43 58899999999999999999875
No 97
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.98 E-value=3.2e-06 Score=62.13 Aligned_cols=62 Identities=15% Similarity=0.058 Sum_probs=48.3
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
..+|.|.. .|+++|++|++.+... |+....+.+.+||.+.+|+|+.|+.....+..+..|.+
T Consensus 30 ~~~H~H~~~~e~~~v~~G~~~v~~~--d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred cCcEECCCcEEEEEEeccEEEEEeC--CCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 67999986 5788888999987764 44444567899999999999999998766666776655
No 98
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.97 E-value=1.5e-05 Score=68.69 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=53.2
Q ss_pred eeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcE
Q 029096 74 MDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI 153 (199)
Q Consensus 74 ~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~ 153 (199)
.-++++.|.. ..-..|.|..+|..|||+|+|.|.+ +++| +.+++||+|.+++|..|+|....+..+
T Consensus 193 ~~~~~l~pG~---------~i~~~~~h~~e~~~~il~G~~~~~~---~~~~--~~v~~GD~~~~~~~~~h~~~n~g~~~~ 258 (278)
T 1sq4_A 193 VNIVNFEPGG---------VIPFAETHVMEHGLYVLEGKAVYRL---NQDW--VEVEAGDFMWLRAFCPQACYSGGPGRF 258 (278)
T ss_dssp EEEEEECSSS---------EESCCCCCSEEEEEEEEECEEEEEE---TTEE--EEEETTCEEEEEESCCEEEECCSSSCE
T ss_pred EEEEEECCCC---------CcCCCCCCCccEEEEEEeCEEEEEE---CCEE--EEeCCCCEEEECCCCCEEEEcCCCCCE
Confidence 3567777764 1122456888999999999999998 4777 679999999999999999987555555
Q ss_pred EEE
Q 029096 154 KAM 156 (199)
Q Consensus 154 ~al 156 (199)
+.|
T Consensus 259 ~yl 261 (278)
T 1sq4_A 259 RYL 261 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 99
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.93 E-value=4.5e-05 Score=70.34 Aligned_cols=68 Identities=13% Similarity=0.204 Sum_probs=54.9
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeCCC---------c--EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEec
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE---------K--WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d---------~--~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~ 160 (199)
.....|+|+. .|+.||++|+|++.+-+.++ + .+.-.+++||+++||+|..|+-..+ + .+..+-|++
T Consensus 292 ~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~-~-~~~~v~f~~ 369 (445)
T 2cav_A 292 ALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA-S-DLNMVGIGV 369 (445)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES-S-SEEEEEEEE
T ss_pred ceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC-C-CeEEEEEEc
Confidence 4578999987 89999999999999987653 3 5788899999999999999998877 3 366666664
Q ss_pred CC
Q 029096 161 GD 162 (199)
Q Consensus 161 ~~ 162 (199)
..
T Consensus 370 ~~ 371 (445)
T 2cav_A 370 NA 371 (445)
T ss_dssp SC
T ss_pred cC
Confidence 43
No 100
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.93 E-value=2.2e-05 Score=73.12 Aligned_cols=80 Identities=11% Similarity=0.168 Sum_probs=62.1
Q ss_pred CCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc--------------------------
Q 029096 70 GYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-------------------------- 123 (199)
Q Consensus 70 gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~-------------------------- 123 (199)
||. .=.++|.|. .+...|+|+..|+.||++|+|++.+-..+..
T Consensus 42 gvs-~~r~~i~p~----------Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~ 110 (466)
T 3kgl_A 42 GVS-FVRYIIESK----------GLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQ 110 (466)
T ss_dssp TEE-EEEEEECTT----------EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-------------
T ss_pred CeE-EEEEEECCC----------CEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccc
Confidence 874 345666765 4688999999999999999999998643110
Q ss_pred ----------------------------------EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 124 ----------------------------------WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 124 ----------------------------------~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
.+ ..+++||+|.||||+.||...+.+..+.++-++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 111 GQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKV-EHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDL 181 (466)
T ss_dssp ----------------------------CCEEESCE-EEEETTEEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred ccccccccccccccccccccccccccccccccceee-ccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcC
Confidence 11 37899999999999999998876777888877743
No 101
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.85 E-value=1.8e-05 Score=58.47 Aligned_cols=62 Identities=15% Similarity=0.087 Sum_probs=44.2
Q ss_pred ccccccCcc-eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 95 FEEHLHTDE-EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 95 ~~eH~H~dd-Evr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
..+|.|..+ ++.++++|++.+.. .|+++..+.+++||.+.+|+|+.|++....+..+..+-+
T Consensus 30 ~~~H~H~~~~~iv~v~~G~~~~~~--~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 30 TGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCcEeCCCCEEEEEEeeEEEEEEe--CCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 579999876 44455677766665 355533568999999999999999998766555555433
No 102
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.77 E-value=8.2e-05 Score=62.73 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=42.2
Q ss_pred CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 101 ~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
..+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|+|....+...+.+-+
T Consensus 80 ~~ee~~~Vl~G~l~~~~~---~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAE---GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp TEEEEEEEEESEEEEEET---TE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 458999999999999994 55 368999999999999999998755444444433
No 103
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.76 E-value=7.7e-05 Score=61.25 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=48.7
Q ss_pred eeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEE
Q 029096 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (199)
Q Consensus 75 Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~ 154 (199)
-++.+.|+. .++.|.|...|+.|||+|+ |. +.+ -.+.+||+|.+|+|+.|.+..+....+.
T Consensus 128 ~l~~~~pG~----------~~p~H~H~g~E~~~VL~G~--f~--de~-----~~~~~Gd~~~~p~g~~H~p~a~~~~gc~ 188 (195)
T 2q1z_B 128 RLLWIPGGQ----------AVPDHGHRGLELTLVLQGA--FR--DET-----DRFGAGDIEIADQELEHTPVAERGLDCI 188 (195)
T ss_dssp EEEEECTTC----------BCCCCCCSSCEEEEEEESE--EE--CSS-----SEEETTCEEEECSSCCCCCEECSSSCEE
T ss_pred EEEEECCCC----------CCCCcCCCCeEEEEEEEEE--EE--CCc-----EEECCCeEEEeCcCCccCCEeCCCCCEE
Confidence 466666653 4789999999999999998 33 222 2588999999999999999886444455
Q ss_pred EEE
Q 029096 155 AMR 157 (199)
Q Consensus 155 alR 157 (199)
++-
T Consensus 189 ~l~ 191 (195)
T 2q1z_B 189 CLA 191 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 104
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.75 E-value=9e-05 Score=57.10 Aligned_cols=70 Identities=11% Similarity=0.206 Sum_probs=51.5
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
..-+-...|.. +.++.+.++|..|||+|++.+... +++ .+.+++||++++|+|..-..+..+.
T Consensus 43 ~~GvWe~tPG~-----------~~~~~~~~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~e~-- 105 (116)
T 3es4_A 43 IVAVWMAEPGI-----------YNYAGRDLEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEILSS-- 105 (116)
T ss_dssp EEEEEEECSEE-----------EEECCCSEEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEECSC--
T ss_pred EEEEEecCCce-----------eECeeCCCcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEeEE--
Confidence 34455566554 456666678999999999998874 444 4789999999999999998877655
Q ss_pred EEEEEEe
Q 029096 153 IKAMRLF 159 (199)
Q Consensus 153 ~~alRlF 159 (199)
++-+-++
T Consensus 106 vrK~~~~ 112 (116)
T 3es4_A 106 FRKLATV 112 (116)
T ss_dssp EEEEEEE
T ss_pred EeEEEEE
Confidence 4444443
No 105
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.74 E-value=3.8e-05 Score=69.56 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=45.4
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
-..|.|...+|++|++|+|+..|. ++ ++.+++||+++||++..|++..+++
T Consensus 292 t~~hRht~s~Vy~V~eG~G~~~I~---~~--~~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 292 TATRNEVGSTVFQVFEGAGAVVMN---GE--TTKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp CCCEEESSCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCEEEEESSS
T ss_pred cCCeeccccEEEEEEeCcEEEEEC---CE--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 578999999999999999999995 44 5889999999999999999987643
No 106
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.72 E-value=6.5e-05 Score=61.76 Aligned_cols=59 Identities=25% Similarity=0.445 Sum_probs=45.4
Q ss_pred ccccccccCc-------ceEEEEEeceEEEEEEeCCC----------------cEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 93 NFFEEHLHTD-------EEIRYCVAGSGYFDVRDRNE----------------KWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 93 ~f~~eH~H~d-------dEvr~il~G~g~f~v~~~~d----------------~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
+..++|.|.. .|-++++.|.+++.+.+..- -+-.|.++|||.|.||+|++|||..++
T Consensus 64 Q~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~age 143 (175)
T 2y0o_A 64 QTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGE 143 (175)
T ss_dssp CEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEEE
T ss_pred CcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeCC
Confidence 3478999975 57777999999999953210 024579999999999999999998855
Q ss_pred CC
Q 029096 150 DN 151 (199)
Q Consensus 150 ~~ 151 (199)
..
T Consensus 144 eg 145 (175)
T 2y0o_A 144 EG 145 (175)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 107
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.67 E-value=0.0001 Score=62.70 Aligned_cols=52 Identities=8% Similarity=0.079 Sum_probs=41.4
Q ss_pred cCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEE
Q 029096 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAM 156 (199)
Q Consensus 100 H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~al 156 (199)
|..+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++....+...+.+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~---~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l 133 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDG---QE--THELEAGGYAYFTPEMKMYLANAQEADTEVF 133 (274)
T ss_dssp TTEEEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTSCCEEEESSSSCEEEE
T ss_pred CCceEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 3458999999999999985 44 3689999999999999999987554434333
No 108
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.66 E-value=0.0001 Score=61.30 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=49.7
Q ss_pred eeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec
Q 029096 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 75 Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
+++.++... ...+..|.|++-|+.||++|+|. .+.+..... ..+.+||+++||+|..|.+...
T Consensus 10 ~~~~~~~~~--------~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~--~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 10 NVYRMSKFD--------TYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVS--YEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEECTTC--------EEEEEEEECSSCEEEEESSSCEE-EEETTTTEE--EEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhccc--------chhccHhhhcceEEEEEecCceE-EECCcccee--EEEcCCCEEEEcCCCceeeccc
Confidence 566666543 34578899999999999999999 886221103 5799999999999999999876
No 109
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.65 E-value=0.00011 Score=58.76 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=69.3
Q ss_pred CeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec--C
Q 029096 72 SYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD--T 149 (199)
Q Consensus 72 ~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~--~ 149 (199)
...-++.+.|.. -+..|.|...|..|||+|+..|+- ++ ..+.+||++..|+|..|..... .
T Consensus 42 ~~v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~e---~~----~~~~~Gd~~~~P~g~~H~~~~~~~~ 104 (159)
T 3ebr_A 42 ETITLLKAPAGM----------EMPRHHHTGTVIVYTVQGSWRYKE---HD----WVAHAGSVVYETASTRHTPQSAYAE 104 (159)
T ss_dssp EEEEEEEECSSC----------BCCCEEESSCEEEEEEESCEEETT---SS----CCBCTTCEEEECSSEEECEEESSSS
T ss_pred eEEEEEEECCCC----------CcccccCCCCEEEEEEEeEEEEeC---CC----eEECCCeEEEECCCCcceeEeCCCC
Confidence 456778888774 378999999999999999987752 23 2588999999999999999876 4
Q ss_pred CCcEEEEEE------ecCCCceeecCCCCCCchhHHHHHHHHhhcccCCCcc
Q 029096 150 DNYIKAMRL------FVGDPVWTPFNRPHDHLPARKGYVQNFLQKEAGDSPI 195 (199)
Q Consensus 150 ~~~~~alRl------F~~~~gW~~~~r~~d~~~~r~~yl~~~~~~~~~~~~~ 195 (199)
+..+.++-. |.++.|.+- ++ .|-......|.+......-++-.+
T Consensus 105 ~e~~~~~~~~~G~l~~~~~~g~~~-~~-~d~~~~~~~~~~~~~~~g~~~~~~ 154 (159)
T 3ebr_A 105 GPDIITFNIVAGELLYLDDKDNII-AV-ENWKTSMDRYLNYCKAHGIRPKDL 154 (159)
T ss_dssp SSCEEEEEEEESCEEEECTTCCEE-EE-ECHHHHHHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEecCccEecCCCCCEE-EE-cCHHHHHHHHHHHHHHcCCCcccc
Confidence 444555543 333333221 11 244455556666665544444433
No 110
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.54 E-value=0.00017 Score=68.18 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=63.6
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCC-----------------
Q 029096 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRN----------------- 121 (199)
Q Consensus 59 ~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~----------------- 121 (199)
.+.|+-+ |. +.=.++|.|.. +...|+|+-.|+.||+.|+|++++-..+
T Consensus 40 ~p~l~~~----Gv-s~~R~~i~p~G----------l~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~ 104 (531)
T 3fz3_A 40 QGDFQCA----GV-AASRITIQRNG----------LHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQ 104 (531)
T ss_dssp SHHHHHH----TE-EEEEEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEECCCC-------
T ss_pred ChhhccC----cc-eEEEEEecCCC----------EeCCccCCCCeEEEEEECcEEEEEEcCCCcccccccccccccccc
Confidence 3555554 54 34556677654 5789999999999999999999985321
Q ss_pred ---------------------------------------------------------------C--cEEEEEEecCCEEE
Q 029096 122 ---------------------------------------------------------------E--KWIRIWVKKGGMIV 136 (199)
Q Consensus 122 ---------------------------------------------------------------d--~~~ri~~~~GDlI~ 136 (199)
| +.| ..+++||+|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~vr~GDvia 183 (531)
T 3fz3_A 105 QEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKT-RRIREGDVVA 183 (531)
T ss_dssp ------------------------------------------------------------CCSCEESCC-EEEETTEEEE
T ss_pred ccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceee-ecccCCcEEE
Confidence 1 112 3679999999
Q ss_pred eCCCCceeeeecCCCcEEEEEEe
Q 029096 137 LPAGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 137 vPaG~~HrF~~~~~~~~~alRlF 159 (199)
||||+.||...+.+..+.++-++
T Consensus 184 iPaG~~~w~yN~G~~~l~iv~~~ 206 (531)
T 3fz3_A 184 IPAGVAYWSYNDGDQELVAVNLF 206 (531)
T ss_dssp ECTTCCEEEECCSSSCEEEEEEE
T ss_pred ECCCCeEEEEeCCCceEEEEEEE
Confidence 99999999998777777777666
No 111
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.53 E-value=0.00014 Score=63.19 Aligned_cols=78 Identities=10% Similarity=-0.026 Sum_probs=54.9
Q ss_pred eeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcE-
Q 029096 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYI- 153 (199)
Q Consensus 75 Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~- 153 (199)
=++++.|..- ...|.|..+|+.||++|++.+.+. +++. ..+++||.+.+|+|..|++.....-.+
T Consensus 73 ~lv~l~PGg~----------s~~~~h~~EEfiyVleG~l~l~l~--~g~~--~~L~~Gds~y~p~~~~H~~~N~~~Ar~l 138 (266)
T 4e2q_A 73 YLAKMKEMSS----------SGLPPQDIERLIFVVEGAVTLTNT--SSSS--KKLTVDSYAYLPPNFHHSLDCVESATLV 138 (266)
T ss_dssp EEEEECSSEE----------CCCCCTTEEEEEEEEEECEEEEC----CCC--EEECTTEEEEECTTCCCEEEESSCEEEE
T ss_pred EEEEECcCCc----------CCCCCCCCeEEEEEEEEEEEEEEC--CCcE--EEEcCCCEEEECCCCCEEEEeCCCEEEE
Confidence 3667777641 245788889999999999999985 1343 679999999999999999987543222
Q ss_pred EEEEEecCCCcee
Q 029096 154 KAMRLFVGDPVWT 166 (199)
Q Consensus 154 ~alRlF~~~~gW~ 166 (199)
...+-|..-+|..
T Consensus 139 ~V~k~y~~~~g~~ 151 (266)
T 4e2q_A 139 VFERRYEYLGSHT 151 (266)
T ss_dssp EEEEECCCCTTCC
T ss_pred EEEeEeeeCCCCC
Confidence 2223355556633
No 112
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.43 E-value=0.00054 Score=59.01 Aligned_cols=64 Identities=23% Similarity=0.328 Sum_probs=48.8
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCC-CcEEEEEE--ecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRN-EKWIRIWV--KKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~-d~~~ri~~--~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
-.+|.|.. .|..+|++|++.+++++.. ++|+.+.+ +..+.+.||+|..|-|....+.....|-+
T Consensus 285 rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~ 352 (369)
T 3st7_A 285 KGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMW 352 (369)
T ss_dssp EEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEE
T ss_pred eccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEe
Confidence 46899986 7999999999999999664 56755544 22399999999999998755444555433
No 113
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.20 E-value=0.0019 Score=55.19 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=39.2
Q ss_pred cCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCC
Q 029096 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 100 H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~ 151 (199)
++.+|+.|||+|+..... +++ .+.+.+||+++||+|+.|++...+.-
T Consensus 63 ~p~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~ 109 (238)
T 3myx_A 63 YPYTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPES 109 (238)
T ss_dssp CSSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTE
T ss_pred CCCcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCe
Confidence 345899999999988876 244 57899999999999999999986663
No 114
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.20 E-value=0.00035 Score=58.68 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=37.4
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
.+|+.||++|++.+.+. ++ ...+++||.+.+|+|+.|++...
T Consensus 68 ~ee~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVG---GE--TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp SEEEEEEEEEEEEEECS---SC--EEEECTTEEEEECTTCCCEEEEE
T ss_pred eeEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeC
Confidence 78999999999999985 44 36899999999999999999875
No 115
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.11 E-value=0.002 Score=51.87 Aligned_cols=61 Identities=20% Similarity=0.307 Sum_probs=47.4
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
..-++.+.|.. -++.|.|...|..|||+|+..+. ..+. ..+.+||.+.+|+|..|.+...+
T Consensus 44 ~v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~f~~~---~~~~---~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 44 MVMRASFAPGL----------TLPLHFHTGTVHMYTISGCWYYT---EYPG---QKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEEECTTC----------BCCEEEESSCEEEEEEESEEEET---TCTT---SCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEEECCCC----------cCCcccCCCCEEEEEEEEEEEEC---CCce---EEECCCeEEEeCCCCceeeEeCC
Confidence 35677777764 36899999999999999998762 1212 24789999999999999987754
No 116
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.08 E-value=0.00078 Score=54.17 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=55.5
Q ss_pred hcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeee
Q 029096 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 68 e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
+.| .+.-++..-|.. -+..|.|+..|..|+|+|+..+.-++..+.| .+.+|+++..|+|..|....
T Consensus 43 e~g-~~t~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~---~~~aGsYv~ePpGs~H~p~~ 108 (153)
T 3bal_A 43 ETS-SWTAIFNCPAGS----------SFASHIHAGPGEYFLTKGKMEVRGGEQEGGS---TAYAPSYGFESSGALHGKTF 108 (153)
T ss_dssp TTT-EEEEEEEECTTE----------EECCEEESSCEEEEEEESEEEETTCGGGTSE---EEESSEEEEECTTCEESCCE
T ss_pred ccc-eEEEEEEeCCCC----------CccCccCCCCEEEEEEEEEEEecCccccCcc---ccCCCeEEEcCCCCccccee
Confidence 345 466777777664 4899999999999999999776554221334 46899999999999998544
Q ss_pred cCCCcEEEEEEecCC
Q 029096 148 DTDNYIKAMRLFVGD 162 (199)
Q Consensus 148 ~~~~~~~alRlF~~~ 162 (199)
.++.. .++-.+.++
T Consensus 109 ~~~~~-~~~~~~~Gp 122 (153)
T 3bal_A 109 FPVES-QFYMTFLGP 122 (153)
T ss_dssp ESSCE-EEEEEEESC
T ss_pred CCCCe-EEEEEEECC
Confidence 44433 233334444
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.08 E-value=0.00085 Score=56.47 Aligned_cols=64 Identities=17% Similarity=0.129 Sum_probs=47.9
Q ss_pred eeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEE
Q 029096 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (199)
Q Consensus 75 Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~ 154 (199)
-++.+.|.. .++.|.|...|..|||+|+.. +. + -.+.+||++.+|+|+.|.... ++..+.
T Consensus 46 ~lvr~~pG~----------~~p~H~H~g~Ee~~VL~G~f~----d~-~----~~~~~Gd~~~~P~g~~H~p~a-~~gc~~ 105 (223)
T 3o14_A 46 SIVRYAPGS----------RFSAHTHDGGEEFIVLDGVFQ----DE-H----GDYPAGTYVRNPPTTSHVPGS-AEGCTI 105 (223)
T ss_dssp EEEEECTTE----------ECCCEECTTCEEEEEEEEEEE----ET-T----EEEETTEEEEECTTCEECCEE-SSCEEE
T ss_pred EEEEECCCC----------CcccccCCCCEEEEEEEeEEE----EC-C----eEECCCeEEEeCCCCccccEe-CCCCEE
Confidence 467777663 478999999999999999843 22 2 268899999999999999877 444444
Q ss_pred EEEE
Q 029096 155 AMRL 158 (199)
Q Consensus 155 alRl 158 (199)
-+.+
T Consensus 106 ~vk~ 109 (223)
T 3o14_A 106 FVKL 109 (223)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4433
No 118
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.33 E-value=0.0087 Score=51.09 Aligned_cols=46 Identities=17% Similarity=0.294 Sum_probs=38.0
Q ss_pred cCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 100 HTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 100 H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
|..+|..|||+|+..+... +++ .+.+++||++++|+|..=.++..+
T Consensus 184 ~~~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 184 HKIHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp CSSCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred CCCCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEECc
Confidence 4568999999999888763 555 478999999999999998877654
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.30 E-value=0.015 Score=45.83 Aligned_cols=56 Identities=18% Similarity=0.237 Sum_probs=42.9
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCE-EEeCCCCceeeeecCCC
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGM-IVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDl-I~vPaG~~HrF~~~~~~ 151 (199)
-.+|.|.. .|..++++|+..+.+.+... .-++.+...+. |.||+|+.|.+..-+++
T Consensus 48 RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~-~~~~~L~~~~~gL~IppgvWh~~~~~s~~ 105 (141)
T 2pa7_A 48 RGFHAHKKLEQVLVCLNGSCRVILDDGNI-IQEITLDSPAVGLYVGPAVWHEMHDFSSD 105 (141)
T ss_dssp EEEEEESSCCEEEEEEESCEEEEEECSSC-EEEEEECCTTEEEEECTTCEEEEECCCTT
T ss_pred ECcCcCCCceEEEEEEccEEEEEEECCcE-EEEEEECCCCcEEEeCCCEEEEEEEcCCC
Confidence 46899976 89999999999999964322 34566666655 99999999999764444
No 120
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=95.76 E-value=0.026 Score=46.02 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=60.9
Q ss_pred hcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceE-EEEEEeCCCcEEEEE----EecCCE--EEeCCC
Q 029096 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIW----VKKGGM--IVLPAG 140 (199)
Q Consensus 68 e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g-~f~v~~~~d~~~ri~----~~~GDl--I~vPaG 140 (199)
.|...+.=-+-|.++. +-.+|...-+||+++..|++ .+.+-+.|+...++. +.+|+. ++||+|
T Consensus 45 ~R~~~T~IYfLL~~g~----------~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G 114 (170)
T 1yud_A 45 SRQLWSSIYFLLRTGE----------VSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKG 114 (170)
T ss_dssp SSBSCEEEEEEEETTC----------CEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTT
T ss_pred CCccceEEEEEECCCC----------CCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCC
Confidence 4555554445555442 45788888899999999997 666655667655555 467888 999999
Q ss_pred CceeeeecCCCcEEEEEEecCCCceee
Q 029096 141 CYHRFTLDTDNYIKAMRLFVGDPVWTP 167 (199)
Q Consensus 141 ~~HrF~~~~~~~~~alRlF~~~~gW~~ 167 (199)
+.+.....+..+ ++-...-.|||.-
T Consensus 115 ~wqaa~~~~g~~--~LV~C~VaPGF~f 139 (170)
T 1yud_A 115 CIFGSAMNQDGF--SLVGCMVSPGFTF 139 (170)
T ss_dssp CEEEEEESSSSE--EEEEEEESSCCCG
T ss_pred CEEEEEECCCCc--EEEEEEECCCccC
Confidence 999887653333 4445566788764
No 121
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=95.63 E-value=0.036 Score=45.46 Aligned_cols=56 Identities=20% Similarity=0.424 Sum_probs=44.2
Q ss_pred cccccc---CcceEEEEEeceEE---EEEEeCC----CcEEEEEEec--CCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLH---TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H---~ddEvr~il~G~g~---f~v~~~~----d~~~ri~~~~--GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.| ...+...++.|+++ +++| .+ ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 61 RGlH~q~p~~q~klv~vv~G~v~dV~VD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 61 RGLHFQREKPQGKLVRVIRGEIFDVAVDLR-KNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECC-TTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred ecceecCCccccEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 357777 66899999999987 6666 23 4799888876 57899999999999766554
No 122
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=95.54 E-value=0.032 Score=46.32 Aligned_cols=57 Identities=14% Similarity=0.055 Sum_probs=46.8
Q ss_pred ccccccCcceEEEEEe-ceEEEEEEeCC-----CcEEEEEEecCCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLHTDEEIRYCVA-GSGYFDVRDRN-----EKWIRIWVKKGGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~-G~g~f~v~~~~-----d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.|....+..++. |+.+-.+-|.. ++|..+.+..+-.|.||+|+.|-|..-+++
T Consensus 73 RGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 73 RGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred ceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 4588898899999999 99755554443 679999999999999999999999765554
No 123
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.41 E-value=0.048 Score=44.64 Aligned_cols=57 Identities=18% Similarity=0.353 Sum_probs=44.1
Q ss_pred cccccc---CcceEEEEEeceEE---EEEEeCC---CcEEEEEEec--CCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLH---TDEEIRYCVAGSGY---FDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H---~ddEvr~il~G~g~---f~v~~~~---d~~~ri~~~~--GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.| ....+..++.|+++ +++|... ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 62 RG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 62 RGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 357777 56899999999986 6666211 4799888886 57899999999999766554
No 124
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.40 E-value=0.045 Score=44.78 Aligned_cols=56 Identities=18% Similarity=0.468 Sum_probs=43.7
Q ss_pred cccccc----CcceEEEEEeceEE---EEEEeCC----CcEEEEEEec--CCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLH----TDEEIRYCVAGSGY---FDVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H----~ddEvr~il~G~g~---f~v~~~~----d~~~ri~~~~--GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.| ....+..++.|+++ +++| .+ ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 60 RGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R-~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 60 RGLHFQRGENAQGKLVRCAVGEVFDVAVDIR-KESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp EEEEEECGGGCCCEEEEEEESEEEEEEEECC-TTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeeEccCCCCCCcEEEEEeCCeEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 357777 45899999999986 6665 33 5699888886 47899999999999765554
No 125
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=95.25 E-value=0.029 Score=48.24 Aligned_cols=58 Identities=24% Similarity=0.248 Sum_probs=41.1
Q ss_pred ccccccccCc-ceEEEEEec---eEEEEEEeCC-------------CcE------EEEEEecCCEEEeCCCCceeeeecC
Q 029096 93 NFFEEHLHTD-EEIRYCVAG---SGYFDVRDRN-------------EKW------IRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G---~g~f~v~~~~-------------d~~------~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
+-.++|.|.. .|-+...-| ..+.+..+.+ +.. -.|.+.||+-|.||+|++|||-..+
T Consensus 117 Q~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 117 QVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEA 196 (246)
T ss_dssp CEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEECT
T ss_pred CCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEecC
Confidence 4578999987 666666666 3344444322 111 1568999999999999999999877
Q ss_pred C
Q 029096 150 D 150 (199)
Q Consensus 150 ~ 150 (199)
.
T Consensus 197 g 197 (246)
T 3kmh_A 197 G 197 (246)
T ss_dssp T
T ss_pred C
Confidence 6
No 126
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=95.18 E-value=0.16 Score=41.25 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=45.0
Q ss_pred ccccccC-cceEEEEEeceEEEEEEeC--C----CcEEEEEEe---cCCEEEeCCCCceeeeecCC
Q 029096 95 FEEHLHT-DEEIRYCVAGSGYFDVRDR--N----EKWIRIWVK---KGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 95 ~~eH~H~-ddEvr~il~G~g~f~v~~~--~----d~~~ri~~~---~GDlI~vPaG~~HrF~~~~~ 150 (199)
=-.|.|. ..+...++.|++...+-|. + ++|..+.+. ++-.|.||+|+.|-|..-++
T Consensus 66 RG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 66 KAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred ECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 3578886 5899999999999888543 2 568889998 56789999999999976555
No 127
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=95.03 E-value=0.075 Score=44.41 Aligned_cols=57 Identities=16% Similarity=0.308 Sum_probs=44.7
Q ss_pred ccccccC----cceEEEEEeceE---EEEEEeCC---CcEEEEEEec--CCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLHT----DEEIRYCVAGSG---YFDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H~----ddEvr~il~G~g---~f~v~~~~---d~~~ri~~~~--GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.|. ..+...++.|++ .+|+|... ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 83 RGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 83 RGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp EEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred eEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 3477774 689999999998 66776322 6799988876 78899999999999765554
No 128
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=94.77 E-value=0.31 Score=38.02 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=54.0
Q ss_pred HHhcccccc----ccCc-ceEEEEEeceEEEEEEeCCCc---EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 90 KIKNFFEEH----LHTD-EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 90 ~~~~f~~eH----~H~d-dEvr~il~G~g~f~v~~~~d~---~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
..+.|..-| +|.. -+-.-|++|+..|..=+.++. --.+...+|+..+||++..|+...-+++-.--|.||..
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc~ 101 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVA 101 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEEC
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEeC
Confidence 337788888 5776 578889999999885323222 23478899999999999999999644444444888876
Q ss_pred CC
Q 029096 162 DP 163 (199)
Q Consensus 162 ~~ 163 (199)
++
T Consensus 102 ~~ 103 (127)
T 3bb6_A 102 PE 103 (127)
T ss_dssp HH
T ss_pred Cc
Confidence 53
No 129
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=94.74 E-value=0.089 Score=43.84 Aligned_cols=57 Identities=23% Similarity=0.432 Sum_probs=43.0
Q ss_pred ccccccC----cceEEEEEeceEE---EEEEeC---CCcEEEEEEec--CCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H~----ddEvr~il~G~g~---f~v~~~---~d~~~ri~~~~--GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.|. ...+..++.|+++ +++|.. =++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 60 RGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 60 RGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp EEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred eeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 3577775 5899999999986 555421 14699888877 47899999999999765555
No 130
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=94.70 E-value=0.19 Score=40.52 Aligned_cols=71 Identities=13% Similarity=0.159 Sum_probs=54.6
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeC-CCc---EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCC
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDR-NEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~-~d~---~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~ 163 (199)
+.-..|-|.. ..+.+||+|+....+-.. ++. .-+..+.+||.++.|+|--|++....+.....|.+|.++-
T Consensus 80 q~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp~ 155 (171)
T 3eqe_A 80 KETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPL 155 (171)
T ss_dssp CBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESCC
T ss_pred CCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCCc
Confidence 3467899997 678889999999765322 221 1246789999999999999999876667789999999764
No 131
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=94.65 E-value=0.09 Score=44.26 Aligned_cols=57 Identities=21% Similarity=0.298 Sum_probs=44.0
Q ss_pred ccccccC----cceEEEEEeceEE---EEEEeC---CCcEEEEEEecC--CEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H~----ddEvr~il~G~g~---f~v~~~---~d~~~ri~~~~G--DlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.|. ...+..++.|+++ +++|.. -++|..+.+... -.|.||+|..|-|..-+++
T Consensus 68 RGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 68 RGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp EEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred EcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 3477775 5899999999987 666622 156998988875 6899999999999765554
No 132
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=94.45 E-value=0.24 Score=40.94 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=54.8
Q ss_pred hccccccccCcceEEEEEeceEEEEE--EeCCCcEE----EEEEecCCEEEeCC--CCceeeeec-CCCcEEEEEEecCC
Q 029096 92 KNFFEEHLHTDEEIRYCVAGSGYFDV--RDRNEKWI----RIWVKKGGMIVLPA--GCYHRFTLD-TDNYIKAMRLFVGD 162 (199)
Q Consensus 92 ~~f~~eH~H~ddEvr~il~G~g~f~v--~~~~d~~~----ri~~~~GDlI~vPa--G~~HrF~~~-~~~~~~alRlF~~~ 162 (199)
.+.-..|-|....+.+||+|+..-.+ +..++... +..+.+|+.+.+++ |--|+.... .+.....|.+|..+
T Consensus 89 Gq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~~ 168 (208)
T 2gm6_A 89 GQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGAN 168 (208)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcCC
Confidence 35678999999999999999997655 21223222 46799999999999 888988743 45568999999775
Q ss_pred C
Q 029096 163 P 163 (199)
Q Consensus 163 ~ 163 (199)
-
T Consensus 169 ~ 169 (208)
T 2gm6_A 169 I 169 (208)
T ss_dssp G
T ss_pred C
Confidence 3
No 133
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=94.23 E-value=0.048 Score=45.65 Aligned_cols=60 Identities=13% Similarity=0.121 Sum_probs=44.3
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
..-++.+.|.. -+..|.|..+|+ |||+|+.. - . + -.+.+|+.|.+|+|..|.+..+++..
T Consensus 147 ~v~l~r~~~G~----------~~~~~~hgG~Ei-lVL~G~~~--d--~-~----~~~~~GsWlR~P~gs~h~~~ag~~g~ 206 (223)
T 3o14_A 147 TVTHRKLEPGA----------NLTSEAAGGIEV-LVLDGDVT--V--N-D----EVLGRNAWLRLPEGEALSATAGARGA 206 (223)
T ss_dssp EEEEEEECTTC----------EEEECCSSCEEE-EEEEEEEE--E--T-T----EEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEECCCC----------ccCCCCCCcEEE-EEEEeEEE--E--C-C----ceECCCeEEEeCCCCccCcEECCCCe
Confidence 44556666553 368899966887 99999943 2 2 2 26889999999999999998866543
No 134
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=94.20 E-value=0.14 Score=43.27 Aligned_cols=57 Identities=25% Similarity=0.425 Sum_probs=43.3
Q ss_pred ccccccC----cceEEEEEeceEE---EEEEeC---CCcEEEEEEecC--CEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLHT----DEEIRYCVAGSGY---FDVRDR---NEKWIRIWVKKG--GMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H~----ddEvr~il~G~g~---f~v~~~---~d~~~ri~~~~G--DlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.|. ...+..++.|+++ +++|.. -++|..+.+.+. -.|.||+|+.|-|..-+++
T Consensus 79 RGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 79 RGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp EEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred eeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 3577775 5899999999987 555521 146998888875 7899999999999765555
No 135
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.13 E-value=0.083 Score=49.25 Aligned_cols=44 Identities=9% Similarity=0.062 Sum_probs=37.6
Q ss_pred CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 101 ~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
+.|++.|+-+|++.+.-+ - + .+.+++||+++||.||.++..+.+
T Consensus 177 DGD~Livpq~G~l~i~TE-f-G---~L~v~pgei~VIPRGi~frv~l~~ 220 (471)
T 1eyb_A 177 DGDFLIVPQKGNLLIYTE-F-G---KMLVQPNEICVIQRGMRFSIDVFE 220 (471)
T ss_dssp SEEEEEEEEESCEEEEET-T-E---EEEECTTEEEEECTTCCEEEECSS
T ss_pred CCCEEEEEEeCCEEEEEe-c-c---cEEeccCCEEEECCccEEEEeeCC
Confidence 349999999999988775 2 2 588999999999999999999865
No 136
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.73 E-value=0.24 Score=39.38 Aligned_cols=51 Identities=14% Similarity=0.313 Sum_probs=38.3
Q ss_pred cccCcceEEEEEeceEEEEEEeCC----------------------------------CcEEEEEEecCCEEEeCCCCce
Q 029096 98 HLHTDEEIRYCVAGSGYFDVRDRN----------------------------------EKWIRIWVKKGGMIVLPAGCYH 143 (199)
Q Consensus 98 H~H~ddEvr~il~G~g~f~v~~~~----------------------------------d~~~ri~~~~GDlI~vPaG~~H 143 (199)
|....+-+...+.|+=.+.+-..+ -..+++.+++||+|.||+|-.|
T Consensus 140 H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H 219 (235)
T 4gjz_A 140 HQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWH 219 (235)
T ss_dssp ECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCEE
T ss_pred eeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCcE
Confidence 333346777788999999884221 1356899999999999999999
Q ss_pred eeeec
Q 029096 144 RFTLD 148 (199)
Q Consensus 144 rF~~~ 148 (199)
....-
T Consensus 220 ~V~~l 224 (235)
T 4gjz_A 220 YVRAL 224 (235)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 87654
No 137
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=93.01 E-value=0.37 Score=39.90 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=43.1
Q ss_pred ccccccC----cceEEEEEeceEEE---EEEeCC----CcEEEEEEec--CCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLHT----DEEIRYCVAGSGYF---DVRDRN----EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H~----ddEvr~il~G~g~f---~v~~~~----d~~~ri~~~~--GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.|. ...+..++.|+++. ++| .+ ++|..+.+.. +-.|.||+|+.|-|..-+++
T Consensus 78 RGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR-~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 78 RGLHYQRTPKEQGKIIFVPKGRILDVAVDVR-KSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp EEEEEECTTSCCEEEEEEEESEEEEEEEECB-TTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred eeEEccCCCCCCceEEEEeCCEEEEEEEECC-CCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 3577775 58999999999865 554 22 4699888885 68899999999999765553
No 138
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=91.94 E-value=0.53 Score=43.14 Aligned_cols=55 Identities=15% Similarity=0.245 Sum_probs=42.3
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCC----------------CcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRN----------------EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~----------------d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
+..|.-..+-+...+.|+=.+.+-..+ ...+.+.+++||++.||+|..|.....+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 456775557777778899988886442 1235789999999999999999987654
No 139
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=91.93 E-value=0.37 Score=42.30 Aligned_cols=52 Identities=12% Similarity=0.155 Sum_probs=41.1
Q ss_pred ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecC
Q 029096 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVG 161 (199)
Q Consensus 103 dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~ 161 (199)
|=..++++|+....+. ++ ...+.+||.|.||||+.|.+..+++ .++|.+-.+
T Consensus 227 d~wiWqLEGss~Vt~~---~q--~~~L~~~DsLLIpa~~~y~~~r~~g--sv~L~I~~~ 278 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMG---GR--RLSLAPDDSLLVLAGTSYAWERTQG--SVALSVTQD 278 (286)
T ss_dssp CEEEEEEESCEEEEET---TE--EEEECTTEEEEECTTCCEEEEECTT--CEEEEEEEC
T ss_pred cEEEEEEcCceEEEEC---Ce--EEeccCCCEEEecCCCeEEEEecCC--eEEEEEEEC
Confidence 6678899999876663 54 4689999999999999999988776 466666544
No 140
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=91.50 E-value=0.73 Score=40.54 Aligned_cols=66 Identities=9% Similarity=0.064 Sum_probs=47.8
Q ss_pred cccccCcceEEEEEeceEEEEEEeCC-----------------------------------CcEEEEEEecCCEEEeCCC
Q 029096 96 EEHLHTDEEIRYCVAGSGYFDVRDRN-----------------------------------EKWIRIWVKKGGMIVLPAG 140 (199)
Q Consensus 96 ~eH~H~ddEvr~il~G~g~f~v~~~~-----------------------------------d~~~ri~~~~GDlI~vPaG 140 (199)
..|....+-+...+.|+=.+.+-... ...+.+.+++||+|.||+|
T Consensus 197 ~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~g 276 (349)
T 3d8c_A 197 PAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMY 276 (349)
T ss_dssp EEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEEEECTT
T ss_pred cceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEEEECCC
Confidence 34554456777778898888764211 1568999999999999999
Q ss_pred CceeeeecC-CCcEEEEEEecC
Q 029096 141 CYHRFTLDT-DNYIKAMRLFVG 161 (199)
Q Consensus 141 ~~HrF~~~~-~~~~~alRlF~~ 161 (199)
-.|.....+ +..-.++.++..
T Consensus 277 WwH~V~~l~d~~~sisvn~w~~ 298 (349)
T 3d8c_A 277 WWHHIESLLNGGITITVNFWYK 298 (349)
T ss_dssp CEEEEEECTTSCCEEEEEEEEE
T ss_pred CcEEEEEcCCCCcEEEEEEEcC
Confidence 999987655 345677777653
No 141
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=90.95 E-value=2.2 Score=39.88 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=46.8
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCC--------------------cEEEEEEecCCEEEeCCCCceeeeecCCCcEE
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNE--------------------KWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIK 154 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d--------------------~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~ 154 (199)
+..|.=..+-+..-+.|+=.+.|....+ ..+.+.+++||++.||+|..|..+..++..-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 3455555566667788888888864321 13578999999999999999999887654445
Q ss_pred EEEEec
Q 029096 155 AMRLFV 160 (199)
Q Consensus 155 alRlF~ 160 (199)
.+.+-.
T Consensus 258 hlTi~~ 263 (489)
T 4diq_A 258 HLTLST 263 (489)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 555543
No 142
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=89.94 E-value=0.24 Score=43.07 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=35.9
Q ss_pred ccccccCcc---------eEEEE-Ee---ceEEEEE----EeCCCcEEEEEEecCCEEEeCCCCceeeee
Q 029096 95 FEEHLHTDE---------EIRYC-VA---GSGYFDV----RDRNEKWIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 95 ~~eH~H~dd---------Evr~i-l~---G~g~f~v----~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
|+.|.|+.+ |++|+ +. |.|+--+ + ..|+ .+.++.||.++||.|- |--.+
T Consensus 168 yPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~-~~de--~~~V~~~d~VlvP~Gy-Hp~~a 233 (270)
T 2qjv_A 168 WPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDR-SLDE--CMAVYNRDVVXVPXGY-HPVAT 233 (270)
T ss_dssp CSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTS-SSEE--EEEEETTCEEEESSSB-CCEEE
T ss_pred CCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCC-CCce--EEEEECCCEEecCCCc-CCCcC
Confidence 899999975 99988 54 4444444 2 1233 4889999999999999 98443
No 143
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=89.30 E-value=1.2 Score=39.07 Aligned_cols=54 Identities=20% Similarity=0.413 Sum_probs=41.5
Q ss_pred ccccccCcceEEEEEeceEEEEEE-eCC---------------------------------CcEEEEEEecCCEEEeCCC
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVR-DRN---------------------------------EKWIRIWVKKGGMIVLPAG 140 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~-~~~---------------------------------d~~~ri~~~~GDlI~vPaG 140 (199)
...|....+-+...+.|+=.+.+- ..+ ...+.+.+++||+|.||+|
T Consensus 154 ~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP~g 233 (342)
T 1vrb_A 154 FKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRG 233 (342)
T ss_dssp CCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEECTT
T ss_pred CCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeCCC
Confidence 456666567777778899888887 321 1236789999999999999
Q ss_pred Cceeeeec
Q 029096 141 CYHRFTLD 148 (199)
Q Consensus 141 ~~HrF~~~ 148 (199)
..|.....
T Consensus 234 wwH~v~s~ 241 (342)
T 1vrb_A 234 LWHSTKSD 241 (342)
T ss_dssp CEEEEECS
T ss_pred ccEEEEEC
Confidence 99999865
No 144
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=89.24 E-value=0.52 Score=33.38 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=29.9
Q ss_pred eeeeEEECCCCCCChHHHHhccccccccCc-ceEEEEEeceEEEEEEeCCC
Q 029096 73 YMDFCEVCPEKLPNYEEKIKNFFEEHLHTD-EEIRYCVAGSGYFDVRDRNE 122 (199)
Q Consensus 73 ~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~d-dEvr~il~G~g~f~v~~~~d 122 (199)
+.-.+.+.+.. .+..|+|.. -||.||++|++++.+-+..+
T Consensus 37 s~~r~~l~~gg----------~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 37 LLNCLQMNEGA----------LFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EEEEEEECTTC----------EEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred ceEEEEEcCCc----------CcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 34555566654 478999996 79999999999999865443
No 145
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.60 E-value=1.9 Score=36.69 Aligned_cols=63 Identities=14% Similarity=0.290 Sum_probs=45.4
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCC--Cceee-eecCCCcEEEEEEecC
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHRF-TLDTDNYIKAMRLFVG 161 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG--~~HrF-~~~~~~~~~alRlF~~ 161 (199)
|..|.|.+ |.|.|+++|++... |.-+. .-.+++||+-..-|| +.|-= ...++..+..+.|...
T Consensus 77 f~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~ 143 (256)
T 2vec_A 77 FQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD 143 (256)
T ss_dssp EEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEE
T ss_pred cCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEe
Confidence 68999998 55899999997654 34333 357999999999665 78964 3344456777777644
No 146
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=88.48 E-value=3 Score=34.61 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=42.2
Q ss_pred cccccc----CcceEEEEEeceEE---EEEEeCC---CcEEEEEEec--CCEEEeCCCCceeeeecCCC
Q 029096 95 FEEHLH----TDEEIRYCVAGSGY---FDVRDRN---EKWIRIWVKK--GGMIVLPAGCYHRFTLDTDN 151 (199)
Q Consensus 95 ~~eH~H----~ddEvr~il~G~g~---f~v~~~~---d~~~ri~~~~--GDlI~vPaG~~HrF~~~~~~ 151 (199)
=-.|.| .......++.|+.+ +|+|... ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 57 RGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 57 RGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp EEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT
T ss_pred EEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC
Confidence 346766 46899999999984 3334211 5788888876 77899999999999765554
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=88.01 E-value=1.7 Score=37.95 Aligned_cols=64 Identities=13% Similarity=0.187 Sum_probs=44.1
Q ss_pred cccCcceEEEEEeceEEEEEEeCC------------------------------CcEEEEEEecCCEEEeCCCCceeeee
Q 029096 98 HLHTDEEIRYCVAGSGYFDVRDRN------------------------------EKWIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 98 H~H~ddEvr~il~G~g~f~v~~~~------------------------------d~~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
|.-..+-+...+.|+=++.+-... ...+.+.+++||+|.||+|-.|....
T Consensus 183 H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v~~ 262 (338)
T 3al5_A 183 HYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVIS 262 (338)
T ss_dssp ECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTTCEEEEEE
T ss_pred eECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCCCeEEEee
Confidence 444445566678888888764221 12689999999999999999999876
Q ss_pred cCCCcEEEEEE-ecCCC
Q 029096 148 DTDNYIKAMRL-FVGDP 163 (199)
Q Consensus 148 ~~~~~~~alRl-F~~~~ 163 (199)
.+. ..++.+ |...+
T Consensus 263 l~~--sisvn~~~~~~~ 277 (338)
T 3al5_A 263 EEF--GVGVNIFWKHLP 277 (338)
T ss_dssp SSC--EEEEEEEECSSC
T ss_pred CCC--EEEEEEEecCCc
Confidence 533 456664 54433
No 148
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=85.23 E-value=7.5 Score=31.71 Aligned_cols=72 Identities=14% Similarity=-0.003 Sum_probs=54.0
Q ss_pred ccccccccCc-ceEEEEEeceEEEEEEeC-CC------cEEEEEEecCCEEEe-CCCCceeeeecC-CCcEEEEEEecCC
Q 029096 93 NFFEEHLHTD-EEIRYCVAGSGYFDVRDR-NE------KWIRIWVKKGGMIVL-PAGCYHRFTLDT-DNYIKAMRLFVGD 162 (199)
Q Consensus 93 ~f~~eH~H~d-dEvr~il~G~g~f~v~~~-~d------~~~ri~~~~GDlI~v-PaG~~HrF~~~~-~~~~~alRlF~~~ 162 (199)
+.-..|-|.. -.+.+||+|+..-.+=+. ++ ..-...+.+||...+ |++--|+..... +.....|.+|.++
T Consensus 81 q~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~pp 160 (200)
T 3eln_A 81 HGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPP 160 (200)
T ss_dssp CBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEESC
T ss_pred CcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCCC
Confidence 4578999996 799999999998765321 11 122578999999999 777789997644 5678999999876
Q ss_pred Cc
Q 029096 163 PV 164 (199)
Q Consensus 163 ~g 164 (199)
-+
T Consensus 161 ~~ 162 (200)
T 3eln_A 161 FD 162 (200)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 149
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=84.12 E-value=3.5 Score=34.66 Aligned_cols=62 Identities=21% Similarity=0.433 Sum_probs=44.5
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCC--Ccee-eeecCCCcEEEEEEec
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAG--CYHR-FTLDTDNYIKAMRLFV 160 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG--~~Hr-F~~~~~~~~~alRlF~ 160 (199)
|..|.|.. |.|.|+++|++.. +|.-+. .-.+++||+-..-|| +.|- +...++..+..+.|..
T Consensus 54 f~~HPHrg~EtvTyvl~G~~~H--~DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv 119 (242)
T 1tq5_A 54 FGTHPHKDMEILTYVLEGTVEH--QDSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWI 119 (242)
T ss_dssp EEEEEECSCEEEEEEEESEEEE--EESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEE
T ss_pred CCCcCCCCcEEEEEEEEeEEEE--EeCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEE
Confidence 68999998 5599999998654 334333 357899999888555 8896 4444445677777764
No 150
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=82.42 E-value=11 Score=31.09 Aligned_cols=72 Identities=14% Similarity=0.100 Sum_probs=54.0
Q ss_pred hccccccccCcceEEEEEeceEEEEE--EeCCCcEE----EEEEecCCEEEeCCC--Cceeeeec-CCCcEEEEEEecCC
Q 029096 92 KNFFEEHLHTDEEIRYCVAGSGYFDV--RDRNEKWI----RIWVKKGGMIVLPAG--CYHRFTLD-TDNYIKAMRLFVGD 162 (199)
Q Consensus 92 ~~f~~eH~H~ddEvr~il~G~g~f~v--~~~~d~~~----ri~~~~GDlI~vPaG--~~HrF~~~-~~~~~~alRlF~~~ 162 (199)
.+.-..|-|..--+..|++|+..-.+ +..++... +..+.+||.+.++++ --|+.... .+.....|.+|.++
T Consensus 83 Gq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~p 162 (211)
T 3uss_A 83 GQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGAN 162 (211)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCC
Confidence 35578999998899999999987655 22233321 267999999999988 67888743 45568999999887
Q ss_pred C
Q 029096 163 P 163 (199)
Q Consensus 163 ~ 163 (199)
-
T Consensus 163 l 163 (211)
T 3uss_A 163 I 163 (211)
T ss_dssp G
T ss_pred C
Confidence 5
No 151
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=82.15 E-value=0.61 Score=40.49 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=33.6
Q ss_pred ceEEEEEe-ceEEEEEEeC-----------CCc------EEEEEEecCCEEEeCCCCceeeeec
Q 029096 103 EEIRYCVA-GSGYFDVRDR-----------NEK------WIRIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 103 dEvr~il~-G~g~f~v~~~-----------~d~------~~ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
.|..|+|+ .+++++++.. ++. --++.+++||.+.||||+.|-.-.+
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~G 181 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEGL 181 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEESE
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCCC
Confidence 68888887 5566665521 122 4478999999999999999987543
No 152
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=81.48 E-value=2.2 Score=35.02 Aligned_cols=56 Identities=14% Similarity=0.296 Sum_probs=38.3
Q ss_pred hccccccccCcce---EEEEEe--ceEEEEEEeCC------------------CcEEEEEEecCCEEEeCCCCceeeee
Q 029096 92 KNFFEEHLHTDEE---IRYCVA--GSGYFDVRDRN------------------EKWIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 92 ~~f~~eH~H~ddE---vr~il~--G~g~f~v~~~~------------------d~~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
..|+..|.|..-- |.|+-- +.|.+.+.+.. ..+..|..++||||+-|+-+.|....
T Consensus 113 G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 113 GGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp TCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECC
T ss_pred CCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccC
Confidence 5789999998644 334422 23334443221 23457889999999999999999876
No 153
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=80.65 E-value=0.74 Score=40.21 Aligned_cols=23 Identities=30% Similarity=0.528 Sum_probs=20.2
Q ss_pred EEEEEecCCEEEeCCCCceeeee
Q 029096 125 IRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 125 ~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
-++.+++||.+.||||+.|-.-.
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 47899999999999999998643
No 154
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=80.40 E-value=7.8 Score=29.64 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=47.0
Q ss_pred hccccccccCc--ceEEEEEeceEEEEEEeCCCc---EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCC
Q 029096 92 KNFFEEHLHTD--EEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (199)
Q Consensus 92 ~~f~~eH~H~d--dEvr~il~G~g~f~v~~~~d~---~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~ 163 (199)
+.|..-|.=.. =.-.=|++|+..|.+=..++. -..+.+.+|+.-+||+...|+..++++-. --|.||..++
T Consensus 26 ~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~-f~leFyc~~~ 101 (119)
T 3dl3_A 26 EALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQ-FNINFWSDQD 101 (119)
T ss_dssp HHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCE-EEEEEEECC-
T ss_pred HHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeE-EEEEEEECch
Confidence 45555553332 134557999999997322221 13568889999999999999999655533 3377877655
No 155
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=80.22 E-value=2.1 Score=37.74 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=23.6
Q ss_pred EEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 124 WIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 124 ~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
.+++.+++||+|.||+|-.|.....++
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 368999999999999999999876655
No 156
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=77.30 E-value=1.3 Score=39.94 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=20.5
Q ss_pred EEEEecCCEEEeCCCCceeeeec
Q 029096 126 RIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 126 ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
.|.+++||.+.||||+.|-.-.+
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCCC
Confidence 68999999999999999987544
No 157
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=76.88 E-value=7 Score=28.82 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=36.5
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
..|+-=|++|++.+.+.+ .++| ....+|+-..||++..-.....+
T Consensus 41 ~~E~M~vvsG~~~V~lpg-~~ew--~~~~aGesF~Vpans~F~l~v~~ 85 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVG-EADW--TTYSSGESFDVEGNSSFELQVKD 85 (94)
T ss_dssp SCEEEEEEESEEEEEETT-CSSC--EEEETTCEEEECSSEEEEEEESS
T ss_pred CeEEEEEEEeEEEEEcCC-CCcC--EEECCCCEEEECCCCEEEEEEcc
Confidence 478899999999999963 3578 57899999999999877665544
No 158
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=72.56 E-value=2.5 Score=37.06 Aligned_cols=52 Identities=21% Similarity=0.365 Sum_probs=34.3
Q ss_pred cccccC-cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCce--eeeecCCCcEEEEEE
Q 029096 96 EEHLHT-DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYH--RFTLDTDNYIKAMRL 158 (199)
Q Consensus 96 ~eH~H~-ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~H--rF~~~~~~~~~alRl 158 (199)
++=.|. +-| .||+.|++.++ + | .+.+|.++.+|+|+.= |=.+++.+ +..|-+
T Consensus 105 P~Gi~~ad~E-~fVL~G~i~~G-----~-~---~l~~h~Y~f~PaGV~~~~~kv~~~~g-~~iL~f 159 (303)
T 2qdr_A 105 PSGIFTADLE-IFVIKGAIQLG-----E-W---QLNKHSYSFIPAGVRIGSWKVLGGEE-AEILWM 159 (303)
T ss_dssp CCBEESSCEE-EEEEESEEEET-----T-E---EECTTEEEEECTTCCBCCEEEETTSC-EEEEEE
T ss_pred CCcccccceE-EEEEEeEEEeC-----C-E---EecCCceEEecCCCccCceeecCCCC-cEEEEE
Confidence 344555 445 99999986642 2 2 6999999999999854 44444544 455533
No 159
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=72.39 E-value=4.4 Score=37.31 Aligned_cols=29 Identities=28% Similarity=0.475 Sum_probs=24.2
Q ss_pred CcEEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 122 EKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 122 d~~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
++++++.+++||.|.||+|-.|.....++
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 35689999999999999999998765444
No 160
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=71.40 E-value=2.2 Score=38.76 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=23.0
Q ss_pred cEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 123 KWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 123 ~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
+++++.+++||.|.||+|-.|.....+
T Consensus 242 ~~~ev~l~pGEtlfIPsGWwH~V~nle 268 (392)
T 3pua_A 242 KCYKCIVKQGQTLFIPSGWIYATLTPV 268 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred ceEEEEECCCcEEeeCCCceEEEecCC
Confidence 568999999999999999999865433
No 161
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=71.37 E-value=2.3 Score=37.92 Aligned_cols=23 Identities=22% Similarity=0.352 Sum_probs=19.9
Q ss_pred EEEEEEecCCEEEeCCCCceeee
Q 029096 124 WIRIWVKKGGMIVLPAGCYHRFT 146 (199)
Q Consensus 124 ~~ri~~~~GDlI~vPaG~~HrF~ 146 (199)
++++.=++||+|++++|++||.-
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~ 300 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQ 300 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEE
Confidence 45778889999999999999954
No 162
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=71.17 E-value=6.4 Score=34.47 Aligned_cols=30 Identities=17% Similarity=0.348 Sum_probs=24.7
Q ss_pred ccCcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcee
Q 029096 99 LHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 144 (199)
Q Consensus 99 ~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~Hr 144 (199)
+|+.-|=-|+|+|.+ ..|+..+-|+|+.|.
T Consensus 235 iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 235 IQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EECSCEEEEEEEEEE----------------EETTEEEETTEEEEE
T ss_pred eeccceeEEEEeeec----------------cCceeeEcCCCCccC
Confidence 477766678898865 349999999999998
No 163
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=70.72 E-value=16 Score=31.61 Aligned_cols=36 Identities=31% Similarity=0.379 Sum_probs=29.4
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCc
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCY 142 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~ 142 (199)
.-.|..+++|+|.... +++ .+.+++||-++|||++.
T Consensus 269 ~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 269 SFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCC
T ss_pred ccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCc
Confidence 4689999999998765 233 46899999999999974
No 164
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=70.61 E-value=3.6 Score=37.08 Aligned_cols=28 Identities=25% Similarity=0.437 Sum_probs=23.5
Q ss_pred CcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 122 EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 122 d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
++++++.+++||.|.||+|-.|....-+
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nle 241 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTPV 241 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecCC
Confidence 3568999999999999999999865433
No 165
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=70.34 E-value=14 Score=30.62 Aligned_cols=54 Identities=19% Similarity=0.151 Sum_probs=38.1
Q ss_pred ccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEec----CC--EEEeCCCCceeeeec
Q 029096 95 FEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK----GG--MIVLPAGCYHRFTLD 148 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~----GD--lI~vPaG~~HrF~~~ 148 (199)
-.+|.-.-+||++...|++...+-..++...++.+.+ |. .++||+|+.....+.
T Consensus 93 S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 93 GKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp EEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred ccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 4556656799999999977665555666665566643 44 389999988776553
No 166
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=68.89 E-value=5.2 Score=36.88 Aligned_cols=28 Identities=36% Similarity=0.478 Sum_probs=23.7
Q ss_pred cEEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 123 KWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 123 ~~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
+.+++.+++||+|.||+|-.|....-++
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nled 291 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTPTD 291 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred cceEEEECCCcEEEeCCCceEEEecCCC
Confidence 4679999999999999999998765443
No 167
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=68.67 E-value=2.7 Score=38.44 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=20.3
Q ss_pred EEEEecCCEEEeCCCCceeeeec
Q 029096 126 RIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 126 ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
.|.+++||.|.||||+.|-.--+
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred eEecCCCCEEecCCCCccccCCC
Confidence 68899999999999999977544
No 168
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=67.59 E-value=4.3 Score=38.32 Aligned_cols=29 Identities=28% Similarity=0.472 Sum_probs=23.5
Q ss_pred CcEEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 122 EKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 122 d~~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
+.++++.+++||.|.||+|-.|.....++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCC
Confidence 35678999999999999999997654333
No 169
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=67.51 E-value=6.5 Score=34.40 Aligned_cols=49 Identities=12% Similarity=0.146 Sum_probs=24.8
Q ss_pred ccccccCc--ceEEEEE-e--ceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcee
Q 029096 95 FEEHLHTD--EEIRYCV-A--GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 144 (199)
Q Consensus 95 ~~eH~H~d--dEvr~il-~--G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~Hr 144 (199)
|+.|.|+. |+.+|+- . |.++-..+ .-|+-.-+.|+-||.+++|.|-+|-
T Consensus 196 yPpHkHDrr~E~yyYF~l~p~~~v~h~~g-~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 196 MPCHTHERRMEAYVYFDMEEDTRIFHMMG-KPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp --------CEEEEEEESCCTTCCEEEEES-STTSCEEEEECTTEEEEECTTSCCC
T ss_pred CCCccCCCCCeeEEEEEeCCCCeEEEECC-CCCceEEEEEECCCEEEeCCCcccC
Confidence 88999985 3443332 1 23332233 2344445789999999999998995
No 170
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=67.51 E-value=15 Score=32.02 Aligned_cols=56 Identities=16% Similarity=0.216 Sum_probs=36.1
Q ss_pred ccccccCc--ceEEEEE---eceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCc
Q 029096 95 FEEHLHTD--EEIRYCV---AGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNY 152 (199)
Q Consensus 95 ~~eH~H~d--dEvr~il---~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~ 152 (199)
|+.|.|+. ||.+|+- +|.+.--++ ..++-.-+.|+-||.+++|..=.|- ..+.+++
T Consensus 196 yPpHkHDrr~EeyyYF~l~~~gfv~q~~g-~p~Etrhi~V~n~daVlvP~wh~h~-~~G~~~Y 256 (282)
T 1xru_A 196 MPCHTHERRMEVYFYFNMDDDACVFHMMG-QPQETRHIVMHNEQAVISPSWSIHS-GVGTKAY 256 (282)
T ss_dssp CSEEECTTEEEEEEEESCCTTCCEEEEEE-ETTEEEEEEECSSEEEEECTTCEEE-EEESSCC
T ss_pred CCCccCCCCceEEEEEEeCCCCEEEEEeC-CCCCeeEEEEECCCEEEeCCCCCCC-CCCccce
Confidence 89999985 6777764 233333343 4455556789999999999544444 2355443
No 171
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=66.49 E-value=16 Score=26.57 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=26.1
Q ss_pred EEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCC
Q 029096 125 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGD 162 (199)
Q Consensus 125 ~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~ 162 (199)
++=.+++||+++||+|-.=-...+.+ +..+-|-++.
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~~--le~v~F~tna 41 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAASD--LNMVGIGVNA 41 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESSS--EEEEEEEESC
T ss_pred hhceecCCcEEEECCCCceeEEecCC--eEEEEEEecC
Confidence 34579999999999997766666643 6666655554
No 172
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=65.42 E-value=5.1 Score=37.15 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=37.8
Q ss_pred ccccCcce--EEEEEeceEEEEEEeC-------------------------CCcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 97 EHLHTDEE--IRYCVAGSGYFDVRDR-------------------------NEKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 97 eH~H~ddE--vr~il~G~g~f~v~~~-------------------------~d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
.|.....- -..++.|+=.|.+-.. .++++++.+++||+|.||+|-.|....-+
T Consensus 281 ~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~nle 360 (488)
T 3kv5_D 281 FHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQ 360 (488)
T ss_dssp EECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred eEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEeeCCC
Confidence 34444443 3477888888877522 13567999999999999999999865433
No 173
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=65.20 E-value=15 Score=31.63 Aligned_cols=49 Identities=20% Similarity=0.385 Sum_probs=33.6
Q ss_pred eEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEec
Q 029096 104 EIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 104 Evr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~ 160 (199)
.+..+++| |.... +++ .+.+++||.++|||++.. +++... .++++|.|.
T Consensus 250 ~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~-~~i~g~-~~~~~~a~~ 298 (300)
T 1zx5_A 250 NILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDS-FTVESE-RGKIVRIYL 298 (300)
T ss_dssp EEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCE-EEEEEE-EEEEEEEEE
T ss_pred EEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCce-EEEEeC-ceEEEEEEE
Confidence 78899999 87765 233 357999999999999854 222211 366666653
No 174
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=65.11 E-value=21 Score=25.11 Aligned_cols=59 Identities=10% Similarity=-0.059 Sum_probs=37.3
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeC---CCCceeeeecCCCcEEEEEEec
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vP---aG~~HrF~~~~~~~~~alRlF~ 160 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-.- .|.++.++.........+++-.
T Consensus 46 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~~ 108 (149)
T 2pqq_A 46 GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALGH 108 (149)
T ss_dssp ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEEG
T ss_pred CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEeH
Confidence 3679999999999887755554 344578899987432 2344444443344455555543
No 175
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=65.09 E-value=26 Score=28.24 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=39.5
Q ss_pred cccccccCcceEEEEEeceE-EEEEEeCCCcEEEEEEe----cCC---EEEeCCCCceeeee
Q 029096 94 FFEEHLHTDEEIRYCVAGSG-YFDVRDRNEKWIRIWVK----KGG---MIVLPAGCYHRFTL 147 (199)
Q Consensus 94 f~~eH~H~ddEvr~il~G~g-~f~v~~~~d~~~ri~~~----~GD---lI~vPaG~~HrF~~ 147 (199)
+-.+|.-..+|+++...|.. .+.+-..|+...++.+. +|+ .++||+|+......
T Consensus 65 ~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 65 PDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp CEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred CccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 34566666799999999986 46665567777667664 577 58999999665555
No 176
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=64.52 E-value=10 Score=28.51 Aligned_cols=49 Identities=18% Similarity=0.300 Sum_probs=37.9
Q ss_pred ccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeec
Q 029096 97 EHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLD 148 (199)
Q Consensus 97 eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~ 148 (199)
.+.-.. .|+-=|++|++.+.+.+ .++| ....+|+-..||++..-.....
T Consensus 48 Y~F~T~~~E~MevvsG~l~V~LpG-~~eW--~~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 48 YTLSSEVAETIRVLSGMAYYHAEG-ANDV--QELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp EEECCSSCEEEEEEEEEEEEECTT-CSSC--EEEETTCEEEECSSSCEEEEEE
T ss_pred EEecCCCcEEEEEEEeEEEEECCC-CccC--EEECCCCEEEECCCCcEEEEEC
Confidence 344443 79999999999999963 3578 5789999999999987766543
No 177
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=63.90 E-value=30 Score=29.41 Aligned_cols=62 Identities=21% Similarity=0.374 Sum_probs=43.2
Q ss_pred ccccccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCC--CCceeeeecCCCcEEEEEEec
Q 029096 95 FEEHLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 95 ~~eH~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPa--G~~HrF~~~~~~~~~alRlF~ 160 (199)
|..|.|.+ |=|.|+++|+... +|.-+. .-.+++||+-..=| ||.|-=...++..+..+.|..
T Consensus 52 f~~HPHrg~EtVTyvl~G~~~H--~DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 116 (277)
T 2p17_A 52 FDVHPHRGIETVTYVISGELEH--FDSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWV 116 (277)
T ss_dssp CCCEEECSEEEEEEEEESCEEE--EETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEE
T ss_pred CCCCCCCCcEEEEEEEEeEEEE--eeCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEe
Confidence 89999998 5599999999654 334343 45789999966666 577853333445577777765
No 178
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=63.53 E-value=6 Score=35.94 Aligned_cols=28 Identities=25% Similarity=0.443 Sum_probs=23.6
Q ss_pred CcEEEEEEecCCEEEeCCCCceeeeecC
Q 029096 122 EKWIRIWVKKGGMIVLPAGCYHRFTLDT 149 (199)
Q Consensus 122 d~~~ri~~~~GDlI~vPaG~~HrF~~~~ 149 (199)
++++++.+++||.|.||+|-.|....-+
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nle 269 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQ 269 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCc
Confidence 3578999999999999999999875433
No 179
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=61.60 E-value=22 Score=26.93 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=39.1
Q ss_pred cccCc-ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCC
Q 029096 98 HLHTD-EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTD 150 (199)
Q Consensus 98 H~H~d-dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~ 150 (199)
+.-+. .|+-=|++|++...+.+ .++| ....+|+-..||++..-.....+.
T Consensus 52 tF~T~~~E~MevvsG~l~V~Lpg-~~eW--~~~~aGesF~VpanssF~lkv~~~ 102 (111)
T 3hqx_A 52 TFETHVPERMEIISGECRVKIAD-STES--ELFRAGQSFYVPGNSLFKIETDEV 102 (111)
T ss_dssp EEECSSCEEEEEEESEEEEEETT-CSSC--EEEETTCEEEECTTCEEEEECSSC
T ss_pred EEcCCCcEEEEEEEeEEEEEcCC-cccC--EEeCCCCEEEECCCCcEEEEECcc
Confidence 34443 78999999999999973 3578 578999999999999877766543
No 180
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=60.32 E-value=41 Score=25.67 Aligned_cols=53 Identities=8% Similarity=0.019 Sum_probs=34.1
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEe
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF 159 (199)
.+.+++|++|....... .+++ .+--.+.+||++-. ++.++........++++-
T Consensus 45 ~~~~y~i~~G~v~~~~~-~~G~~~~~~~~~~G~~~G~----~~~~~~~A~~~~~v~~i~ 98 (220)
T 2fmy_A 45 RNLVFLVKSGRVRVYLA-YEDKEFTLAILEAGDIFCT----HTRAFIQAMEDTTILYTD 98 (220)
T ss_dssp SCEEEEEEESEEEEEEE-CSSCEEEEEEEETTCEEES----CSSSEEEESSSEEEEEEE
T ss_pred CCeEEEEEecEEEEEEC-CCCCEEEEEEcCCCCEeCC----ccceEEEEcCcEEEEEEe
Confidence 36799999999988543 4444 44457889999877 333333333345666653
No 181
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=60.30 E-value=18 Score=25.36 Aligned_cols=57 Identities=5% Similarity=0.006 Sum_probs=32.7
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EE---EEEEecCCEEEeC---CCCceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WI---RIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~---ri~~~~GDlI~vP---aG~~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|.........+++ .+ --.+.+||++-.. .+.++.++........++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 47 ADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp CCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred CCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEEE
Confidence 4789999999998876545543 32 3468999987543 34444444433334555544
No 182
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=59.69 E-value=9 Score=33.87 Aligned_cols=38 Identities=5% Similarity=0.132 Sum_probs=32.4
Q ss_pred EEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCcee
Q 029096 107 YCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHR 144 (199)
Q Consensus 107 ~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~Hr 144 (199)
+=|-++..|.++..++..+++.++.|||++++..+++.
T Consensus 228 lSLG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~ 265 (345)
T 3tht_A 228 LSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYL 265 (345)
T ss_dssp EEESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHT
T ss_pred EECCCceeEEEccCCCceEEEEcCCCcEEEEChHHhhc
Confidence 33668999999977777889999999999999998853
No 183
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=59.47 E-value=23 Score=26.55 Aligned_cols=58 Identities=7% Similarity=-0.055 Sum_probs=38.9
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE-eC---CCCceeeeecCCCcEEEEEEe
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV-LP---AGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~-vP---aG~~HrF~~~~~~~~~alRlF 159 (199)
.+.+++|++|.......+.+|+ .+--.+.+||++- +. .|.++.++...-....++++-
T Consensus 48 ~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i~ 110 (194)
T 3dn7_A 48 CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSIT 110 (194)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEEE
T ss_pred eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEEe
Confidence 3789999999999887656554 4445689999986 32 345555555444446666653
No 184
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=59.29 E-value=18 Score=32.38 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=36.1
Q ss_pred CcceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEec
Q 029096 101 TDEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 101 ~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~ 160 (199)
....|..+++|+|..... ++ .+.+++||.++|||+..- +++.. ..+.+|.|.
T Consensus 341 ~~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~~ 392 (394)
T 2wfp_A 341 HSAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADESP-VNASG--TGRLARVYN 392 (394)
T ss_dssp SSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEEC
T ss_pred CCcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEEe
Confidence 346899999999986542 33 468999999999999633 33322 256666653
No 185
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=59.02 E-value=5.2 Score=37.74 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=28.1
Q ss_pred EEEEEEecCCEEEeCCCCceeee-ecCCCcEEEEEEecCCCceeec
Q 029096 124 WIRIWVKKGGMIVLPAGCYHRFT-LDTDNYIKAMRLFVGDPVWTPF 168 (199)
Q Consensus 124 ~~ri~~~~GDlI~vPaG~~HrF~-~~~~~~~~alRlF~~~~gW~~~ 168 (199)
++++.=++||+|++++|++||.- .|- -..+-.-...+-|.++
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~---~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGW---CNNIAWNVGPLTACQY 379 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS---EEEEEEEECCSSHHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecce---eeeeEEEeccCchHHH
Confidence 34677789999999999999954 443 2333344445556654
No 186
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=58.90 E-value=11 Score=30.95 Aligned_cols=40 Identities=13% Similarity=0.217 Sum_probs=32.7
Q ss_pred EEEEeceEEEEEEeC--CCcEEEEEEecCCEEEeCCCCceee
Q 029096 106 RYCVAGSGYFDVRDR--NEKWIRIWVKKGGMIVLPAGCYHRF 145 (199)
Q Consensus 106 r~il~G~g~f~v~~~--~d~~~ri~~~~GDlI~vPaG~~HrF 145 (199)
.+=+-+++.|.++.. ++..++|.++.||+++.+.+.++|+
T Consensus 135 svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~ 176 (211)
T 3i3q_A 135 SVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFY 176 (211)
T ss_dssp EEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCC
T ss_pred EEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceE
Confidence 444778999999854 3567899999999999999988875
No 187
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=58.00 E-value=5.8 Score=37.27 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=19.9
Q ss_pred EEEEEEecCCEEEeCCCCceeeee
Q 029096 124 WIRIWVKKGGMIVLPAGCYHRFTL 147 (199)
Q Consensus 124 ~~ri~~~~GDlI~vPaG~~HrF~~ 147 (199)
++++.=++||+|++++|++||.-.
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs 335 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQA 335 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEe
Confidence 346777899999999999999653
No 188
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=56.76 E-value=53 Score=23.74 Aligned_cols=56 Identities=9% Similarity=-0.145 Sum_probs=33.8
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe---CCCCceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL---PAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~v---PaG~~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|....... .+++ .+--.+.+||++-- =.|..+.++........++++
T Consensus 79 ~~~~y~i~~G~v~~~~~-~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i 138 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYVK-CDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGL 138 (161)
T ss_dssp CCEEEEEEESEEEEEEE-ETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEE
T ss_pred CcEEEEEEeCEEEEEEc-CCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEE
Confidence 47899999999988884 4554 33346889997642 224444444333333444444
No 189
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=56.44 E-value=49 Score=25.30 Aligned_cols=52 Identities=10% Similarity=0.091 Sum_probs=32.9
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeCCCCceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|....... .+++ .+--.+.+||++- .++.++........++++
T Consensus 41 ~~~~y~i~~G~v~~~~~-~~G~~~~~~~~~~G~~fG----~~~~~~~~A~~~~~v~~i 93 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVYLV-GEEREISLFYLTSGDMFC----MHSGCLVEATERTEVRFA 93 (222)
T ss_dssp CCCEEEEEESEEEEEEE-ETTEEEEEEEEETTCEEE----SCSSCEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEEC-CCCCEEEEEEcCCCCEec----CCCCEEEEEccceEEEEE
Confidence 36799999999988643 4444 4445788999998 233333333333566655
No 190
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=56.38 E-value=11 Score=34.33 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=28.2
Q ss_pred EEEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCC
Q 029096 125 IRIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDP 163 (199)
Q Consensus 125 ~ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~ 163 (199)
+.+.-.+||.|+||||-+|-...-.+-=-.++.+++++.
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 478889999999999999987654432224566666654
No 191
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=54.48 E-value=28 Score=31.73 Aligned_cols=57 Identities=19% Similarity=0.334 Sum_probs=37.3
Q ss_pred CcceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEeCCCCceeeeecC---CCcEEEEEEec
Q 029096 101 TDEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVLPAGCYHRFTLDT---DNYIKAMRLFV 160 (199)
Q Consensus 101 ~ddEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~vPaG~~HrF~~~~---~~~~~alRlF~ 160 (199)
..-.|.+|++|+|..... ++ .- .+.+++||.++||++..=.++... ...+.+.|-|.
T Consensus 378 ~~~~illv~~G~g~i~~~--~~~~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~ 438 (440)
T 1pmi_A 378 NGPSIVIATNGKGTIQIT--GDDST-KQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFV 438 (440)
T ss_dssp SSCEEEEEEESEEEEEET--TCGGG-CEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEEC
T ss_pred CCcEEEEEEeCeEEEEeC--Ccccc-eEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEe
Confidence 346799999999998763 22 20 047899999999999432333321 33466666654
No 192
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=53.40 E-value=36 Score=29.18 Aligned_cols=62 Identities=23% Similarity=0.311 Sum_probs=42.9
Q ss_pred ccccccCcce-EEEEE-eceEEEEEEeCCCcEEEEEEecCCEEEeCC--CCceeeeecCCCcEEEEEEec
Q 029096 95 FEEHLHTDEE-IRYCV-AGSGYFDVRDRNEKWIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKAMRLFV 160 (199)
Q Consensus 95 ~~eH~H~ddE-vr~il-~G~g~f~v~~~~d~~~ri~~~~GDlI~vPa--G~~HrF~~~~~~~~~alRlF~ 160 (199)
|..|.|.+-| |.|++ +|+.... |.-+. .-.+.+||+-..=| ||.|-=...++..+..+.|..
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 118 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWV 118 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEE
T ss_pred CCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEe
Confidence 7999999855 99999 9987653 34333 35788999965555 577853333455677887765
No 193
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=53.15 E-value=54 Score=24.76 Aligned_cols=85 Identities=8% Similarity=0.007 Sum_probs=49.7
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 029096 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (199)
Q Consensus 59 ~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~v 137 (199)
.+.++.|... ..+..+.++. ..+.+.. ..+.+++|++|.......+.+++ .+--.+.+||++.+
T Consensus 16 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~ 80 (220)
T 3dv8_A 16 TAQKKLISDN-----LITQHVKKGT---------IIHNGNM-DCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLL 80 (220)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEEEGGG-CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESG
T ss_pred HHHHHHHHhh-----CceEEeCCCC---------EEECCCC-CcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeeh
Confidence 5667777632 2456666553 1222211 34789999999999888766655 33446789999632
Q ss_pred -----CCCCceeeeecCCCcEEEEEE
Q 029096 138 -----PAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 138 -----PaG~~HrF~~~~~~~~~alRl 158 (199)
-.+.++.++........++++
T Consensus 81 g~~~~~~~~~~~~~~~a~~~~~~~~i 106 (220)
T 3dv8_A 81 SASCIMRSIQFEVTIEAEKDTDLWII 106 (220)
T ss_dssp GGGGGCTTCCCCCEEEESSCEEEEEE
T ss_pred hHHHHhCCCCCceEEEEeeeeEEEEE
Confidence 234444444444444566655
No 194
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=52.18 E-value=49 Score=25.91 Aligned_cols=27 Identities=15% Similarity=0.257 Sum_probs=17.2
Q ss_pred EEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCC
Q 029096 106 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA 139 (199)
Q Consensus 106 r~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPa 139 (199)
+|+.+|...-.+. .+ .+++||.|.+|.
T Consensus 95 ~~v~~~g~~~~~~-A~------eLk~GD~v~v~~ 121 (185)
T 2lcj_A 95 VLVYENGRFIEKR-AF------EVKEGDKVLVSE 121 (185)
T ss_dssp EEEEETTEEEEEE-GG------GCCTTCEEEECC
T ss_pred EEEecCCeEEEEE-HH------HCCCCCEEEEcc
Confidence 5555554443444 22 378899999997
No 195
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=52.13 E-value=43 Score=25.16 Aligned_cols=58 Identities=12% Similarity=-0.090 Sum_probs=37.0
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe--CCCCceeeeecCCCcEEEEEEe
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL--PAGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~v--PaG~~HrF~~~~~~~~~alRlF 159 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-. =.+.++.++........++++=
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i~ 77 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLE 77 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEEC
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEEc
Confidence 3679999999998887655554 34457889999854 1233444444444445666553
No 196
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=49.02 E-value=32 Score=27.30 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=37.3
Q ss_pred ccccccc-CcceEEEEEeceE-EEEEEeCCCcEEEEEEe----cCCE--EEeCCCCceeeeec
Q 029096 94 FFEEHLH-TDEEIRYCVAGSG-YFDVRDRNEKWIRIWVK----KGGM--IVLPAGCYHRFTLD 148 (199)
Q Consensus 94 f~~eH~H-~ddEvr~il~G~g-~f~v~~~~d~~~ri~~~----~GDl--I~vPaG~~HrF~~~ 148 (199)
+-.+|.- ..+||++...|.. ...+-..++..-++.+. +|.. ++||+|+.......
T Consensus 52 ~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~ 114 (154)
T 1znp_A 52 RSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESL 114 (154)
T ss_dssp CEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECTTCEEEEEES
T ss_pred CCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcCCEEEEeeEC
Confidence 4567776 6799999999984 34454445554455553 3553 89999987766543
No 197
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=47.28 E-value=48 Score=25.01 Aligned_cols=35 Identities=14% Similarity=0.001 Sum_probs=27.1
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~ 136 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 80 ~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fG 115 (187)
T 3gyd_A 80 GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIG 115 (187)
T ss_dssp CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeee
Confidence 4789999999999888766665 3344789999874
No 198
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=47.02 E-value=78 Score=23.58 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=35.6
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeCC---CC----ceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPA---GC----YHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vPa---G~----~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-.-+ +. ++.++........++++
T Consensus 31 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~~v~~i 95 (207)
T 2oz6_A 31 CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEI 95 (207)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcEEEEEE
Confidence 3679999999999887756554 3445788999985432 22 34444333334555555
No 199
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=46.77 E-value=65 Score=24.47 Aligned_cols=85 Identities=8% Similarity=0.102 Sum_probs=48.5
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 029096 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (199)
Q Consensus 59 ~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~v 137 (199)
++.++.|... ..+.++.++. ..+.+-- ..+.+++|++|.......+.+++ .+--.+.+||++-.
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 88 (230)
T 3iwz_A 24 AGTIERFLAH-----SHRRRYPTRT---------DVFRPGD-PAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGE 88 (230)
T ss_dssp HHHHHHHHTT-----SEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESC
T ss_pred HHHHHHHHHh-----CeEEEeCCCC---------EEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEe
Confidence 5677777642 2455555542 1122111 23789999999999887666654 34456899999853
Q ss_pred CC----CCceeeeecCCCcEEEEEE
Q 029096 138 PA----GCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 138 Pa----G~~HrF~~~~~~~~~alRl 158 (199)
.+ +.++.++........++++
T Consensus 89 ~~~~~~~~~~~~~~~a~~~~~v~~i 113 (230)
T 3iwz_A 89 MGLFIESDTREVILRTRTQCELAEI 113 (230)
T ss_dssp GGGTSCCSBCCSEEEESSCEEEEEE
T ss_pred hhhhcCCCCceeEEEEcCcEEEEEE
Confidence 32 2233334333333555555
No 200
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=44.67 E-value=42 Score=26.15 Aligned_cols=38 Identities=13% Similarity=0.216 Sum_probs=26.5
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCC
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPA 139 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPa 139 (199)
.+.+++|++|.......+.+++...+..-+||++-..+
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~~ 73 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSG 73 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEESB
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecchh
Confidence 36799999999998876566553333333899986543
No 201
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=43.91 E-value=52 Score=24.63 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=36.5
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeCCC---C-ceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPAG---C-YHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vPaG---~-~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-..+- . ++.++........++++
T Consensus 37 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 98 (210)
T 3ryp_A 37 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 98 (210)
T ss_dssp CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEE
Confidence 3789999999999888766655 34446899999854321 1 33344333334566655
No 202
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=42.43 E-value=49 Score=24.94 Aligned_cols=58 Identities=7% Similarity=-0.034 Sum_probs=37.3
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeC---CCCceeeeecCCCcEEEEEEe
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vP---aG~~HrF~~~~~~~~~alRlF 159 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-.. .|.++.++........++++-
T Consensus 40 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~ 101 (216)
T 4ev0_A 40 GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLALF 101 (216)
T ss_dssp CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEEE
T ss_pred CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEEc
Confidence 3789999999999888756554 344568999987432 233444444333445666553
No 203
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=42.05 E-value=54 Score=25.25 Aligned_cols=85 Identities=6% Similarity=0.021 Sum_probs=48.4
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 029096 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (199)
Q Consensus 59 ~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~v 137 (199)
.+.++.|... ..+.++.++. ..+.+- -..+.+++|++|.......+.+++ .+--.+.+||++-.
T Consensus 24 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~ 88 (237)
T 3fx3_A 24 EQHVDALLSQ-----AVWRSYDRGE---------TLFLQE-EKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGE 88 (237)
T ss_dssp HHHHHHHHTT-----CEEEEECTTC---------EEECTT-SCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECH
T ss_pred HHHHHHHHhh-----CEEEEECCCC---------EEEcCC-CccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEech
Confidence 5667777643 3455556543 112211 123689999999999888766655 34456899998843
Q ss_pred CC---CCceeeeecCCCcEEEEEE
Q 029096 138 PA---GCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 138 Pa---G~~HrF~~~~~~~~~alRl 158 (199)
.+ |.++.++........++++
T Consensus 89 ~~~~~~~~~~~~~~a~~~~~v~~i 112 (237)
T 3fx3_A 89 AVALRNTPYPVSAEAVTPCEVMHI 112 (237)
T ss_dssp HHHHHTCCCSSEEEESSSEEEEEE
T ss_pred HHHhcCCCCCceEEECCceEEEEE
Confidence 21 3334444333334555555
No 204
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=41.95 E-value=29 Score=31.35 Aligned_cols=48 Identities=15% Similarity=0.172 Sum_probs=26.2
Q ss_pred EEEEEEecCCEEEeCCCCceee-eecCCCcEEEEEEecCCCceeecCCCCCC
Q 029096 124 WIRIWVKKGGMIVLPAGCYHRF-TLDTDNYIKAMRLFVGDPVWTPFNRPHDH 174 (199)
Q Consensus 124 ~~ri~~~~GDlI~vPaG~~HrF-~~~~~~~~~alRlF~~~~gW~~~~r~~d~ 174 (199)
+.++.-++||+|++=+|+||+- ..|-+ .+.-.--..+-|.++.+.+..
T Consensus 304 v~r~vQ~pGEfViTfP~aYH~gfn~Gfn---~aEAvNFA~~~Wl~~g~~a~~ 352 (373)
T 3opt_A 304 CNEIVHHEGEFMITYPYGYHAGFNYGYN---LAESVNFALEEWLPIGKKAGK 352 (373)
T ss_dssp CEEEEECTTCEEEECTTCCEEEEESSSE---EEEEEEECCC-----------
T ss_pred eEEEEECCCCEEEECCCceEEEEecCcc---HHHHHccCcHHHHHhhccCcc
Confidence 5588899999999999999984 44433 333333345779988776533
No 205
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=41.64 E-value=12 Score=24.89 Aligned_cols=37 Identities=11% Similarity=0.032 Sum_probs=20.5
Q ss_pred EEEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCceeecC
Q 029096 126 RIWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 169 (199)
Q Consensus 126 ri~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~~~~ 169 (199)
.+.+++||+|.|= ....+....+...-.+..||+|-|
T Consensus 22 ELs~~~Gd~i~v~-------~~~~~gWw~g~~~~~g~~G~~P~n 58 (65)
T 2lj0_A 22 ELELRDGDIVDVM-------EKCDDGWFVGTSRRTKQFGTFPGN 58 (65)
T ss_dssp BCCBCTTCEEEEE-------EECTTSEEEEEETTTCCEEEEETT
T ss_pred CcCCCCCCEEEEe-------EeCCCCEEEEEECCCCCEEEEehh
Confidence 3677888887762 122233444433344567787744
No 206
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=41.27 E-value=67 Score=27.02 Aligned_cols=53 Identities=19% Similarity=0.291 Sum_probs=35.8
Q ss_pred ccccccCcceEEEEEeceE-EEEEEeCCC----------------------------cEEEEEE----ecCCE--EEeCC
Q 029096 95 FEEHLHTDEEIRYCVAGSG-YFDVRDRNE----------------------------KWIRIWV----KKGGM--IVLPA 139 (199)
Q Consensus 95 ~~eH~H~ddEvr~il~G~g-~f~v~~~~d----------------------------~~~ri~~----~~GDl--I~vPa 139 (199)
-.+|.-..+|+++...|.. .+.+-+.|+ ...++.+ .+|.. ++||+
T Consensus 73 S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~ 152 (225)
T 3m3i_A 73 SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPG 152 (225)
T ss_dssp EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECT
T ss_pred cccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCC
Confidence 4556656799999999996 454544555 3445666 34664 89999
Q ss_pred CCceeeee
Q 029096 140 GCYHRFTL 147 (199)
Q Consensus 140 G~~HrF~~ 147 (199)
|+.....+
T Consensus 153 G~WqaA~~ 160 (225)
T 3m3i_A 153 GAIFGSSV 160 (225)
T ss_dssp TCEEEEEC
T ss_pred CEEEEEEE
Confidence 99665544
No 207
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=41.08 E-value=62 Score=24.69 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=36.8
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeC---CCCceeeeecCCCcEEEEEEe
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vP---aG~~HrF~~~~~~~~~alRlF 159 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-.. .|.++.++........++++-
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~ 108 (227)
T 3d0s_A 47 GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMD 108 (227)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEEe
Confidence 3679999999999888765554 334478899987422 234444444333345666553
No 208
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=40.61 E-value=33 Score=28.28 Aligned_cols=38 Identities=11% Similarity=0.332 Sum_probs=30.8
Q ss_pred EEEeceEEEEEEeCC----------CcEEEEEEecCCEEEeCCCCcee
Q 029096 107 YCVAGSGYFDVRDRN----------EKWIRIWVKKGGMIVLPAGCYHR 144 (199)
Q Consensus 107 ~il~G~g~f~v~~~~----------d~~~ri~~~~GDlI~vPaG~~Hr 144 (199)
+=|-++..|.++... +..++|.++.|||+++...++..
T Consensus 159 lSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~ 206 (238)
T 2iuw_A 159 LSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQAD 206 (238)
T ss_dssp EEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHHH
T ss_pred EECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhCc
Confidence 346689999998654 35789999999999999998653
No 209
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=38.64 E-value=64 Score=25.65 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=36.8
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeCCC---C-ceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPAG---C-YHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vPaG---~-~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-..+- . ++.++........++++
T Consensus 87 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i 148 (260)
T 3kcc_A 87 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 148 (260)
T ss_dssp CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEE
Confidence 4789999999999887756555 34456899999854332 1 33344333344566665
No 210
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=38.48 E-value=62 Score=24.67 Aligned_cols=57 Identities=12% Similarity=-0.018 Sum_probs=35.6
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeCC---C-CceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLPA---G-CYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vPa---G-~~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|.........+++ .+--.+.+||++-.-+ + ..+.++........++++
T Consensus 40 ~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i 101 (213)
T 1o5l_A 40 IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSI 101 (213)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEE
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEE
Confidence 3678999999998887655554 3344688999873222 2 244444433444566655
No 211
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=37.94 E-value=85 Score=23.93 Aligned_cols=63 Identities=8% Similarity=0.092 Sum_probs=38.8
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 029096 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (199)
Q Consensus 59 ~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~ 136 (199)
.+.++.|... ..+.++.++. ..+.+- -..+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 19 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 19 EDAMREALKV-----VTERNFQPDE---------LVVEQD-AEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp HHHHHHHHHT-----EEEEEECTTC---------BCCCTT-CTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred HHHHHHHHHh-----cEEEEECCCC---------EEEeCC-CCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 5667777643 3456666553 112111 124679999999998887655554 4445789999974
No 212
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=37.51 E-value=66 Score=23.05 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=23.7
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIV 136 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~ 136 (199)
.+.+++|++|...... +++.+ -.+.+||++-
T Consensus 79 ~~~~y~i~~G~v~~~~---~~~~~-~~~~~G~~fG 109 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYV---NNEWA-TSVGEGGSFG 109 (154)
T ss_dssp CCEEEEEEESCEEEEE---TTEEE-EEECTTCEEC
T ss_pred CCeEEEEEecEEEEEE---CCEEE-EEecCCCEee
Confidence 4789999999998876 35544 3689999864
No 213
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=37.29 E-value=56 Score=26.79 Aligned_cols=57 Identities=11% Similarity=-0.087 Sum_probs=36.5
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeC---CCCceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vP---aG~~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|.......+.+++.+--.+.+||++--- .+.++.++........+++|
T Consensus 54 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~~i 113 (333)
T 4ava_A 54 AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTG 113 (333)
T ss_dssp CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEEEE
Confidence 3679999999999888766665555678999987211 22344444433344555554
No 214
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=36.54 E-value=38 Score=23.89 Aligned_cols=58 Identities=9% Similarity=-0.077 Sum_probs=32.8
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeC---CCCc-eeeeecCCCcEEEEEEe
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP---AGCY-HRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vP---aG~~-HrF~~~~~~~~~alRlF 159 (199)
.+.+++|++|.........+++ .+--.+.+||++-.. .+.. +.++........++++-
T Consensus 53 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i~ 115 (154)
T 2z69_A 53 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFS 115 (154)
T ss_dssp CCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSEEEEEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccceEEEEEC
Confidence 4679999999998876544443 334478899987322 2223 44443333345555553
No 215
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=36.20 E-value=57 Score=24.53 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=36.6
Q ss_pred ceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEeC--CCCceeeeecCCCcEEEEEE
Q 029096 103 EEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVLP--AGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 103 dEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~vP--aG~~HrF~~~~~~~~~alRl 158 (199)
+.+++|++|.........+++ .+--.+.+||++-.+ .|..+.++...-....++++
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 678999999998887655554 334468899988541 13344444433444677777
No 216
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=34.60 E-value=74 Score=24.86 Aligned_cols=35 Identities=6% Similarity=0.082 Sum_probs=26.8
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIV 136 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~ 136 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-
T Consensus 61 ~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 61 AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 3689999999999887666654 4445688999873
No 217
>2lok_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Halobacterium SP} PDB: 4dlh_A
Probab=34.06 E-value=1.5e+02 Score=24.29 Aligned_cols=80 Identities=11% Similarity=0.144 Sum_probs=52.2
Q ss_pred CCCCcCCHhHHhhc-CeEEEEeCCCCccChHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEE
Q 029096 31 DPKEFVSLDQLSEL-GVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCV 109 (199)
Q Consensus 31 ~p~~~v~~~~L~~l-GV~~w~~~~~~~~~~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il 109 (199)
+|..+++.++++.. |+.|+..|+. |...=.++-.++. +.+-.... +.-+..|.+
T Consensus 33 ~p~sPl~~~~r~~F~Gl~~fp~Dp~----------------wrv~a~~~p~~~~--------~~~~v~t~-~g~~~~~~~ 87 (197)
T 2lok_A 33 HDQSPIPPADRGAFDGLRYFDIDAS----------------FRVAARYQPARDP--------EAVELETT-RGPPAEYTR 87 (197)
T ss_dssp CTTSCCCHHHHHTCCCCCCCCCCST----------------TEEEEEEEECSSC--------CEEEEBCS-SSSCEEEEE
T ss_pred CccCCCChhHHhcCCCCccCCCCCC----------------EEEEEEEEECCCC--------cEEEEEec-CCceEEEEE
Confidence 35556777777766 9988877742 4443344434331 23344444 678899999
Q ss_pred eceEEEEEEeCCCcEEEEEE---ecCCEEEeC
Q 029096 110 AGSGYFDVRDRNEKWIRIWV---KKGGMIVLP 138 (199)
Q Consensus 110 ~G~g~f~v~~~~d~~~ri~~---~~GDlI~vP 138 (199)
-|...|.+. |+.+++.+ +.|+-|.||
T Consensus 88 ~G~v~F~l~---G~~~~L~~~~~~~~~~Lflp 116 (197)
T 2lok_A 88 AAVLGFDLG---DSHHTLTAFRVEGESSLFVP 116 (197)
T ss_dssp EEEEEEEET---TEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEC---CEEEEEEEEecCCCCeEEEE
Confidence 999999984 56666766 566777776
No 218
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=33.77 E-value=63 Score=24.34 Aligned_cols=54 Identities=9% Similarity=0.075 Sum_probs=32.7
Q ss_pred cceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEe---CCCCceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVL---PAGCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~v---PaG~~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|...... .+++ +--.+.+||++-- =.|.++.++........++++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i 168 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSL 168 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEE
T ss_pred CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEE
Confidence 3679999999988776 4555 3457899998721 123344444333334455544
No 219
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=33.71 E-value=58 Score=25.24 Aligned_cols=88 Identities=6% Similarity=0.013 Sum_probs=48.8
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 029096 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (199)
Q Consensus 59 ~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~v 137 (199)
.+.++.|....+ ..+.++.++. ..+.+-- ..+.+++|++|.......+.+++ .+--.+.+||++-.
T Consensus 31 ~~~~~~l~~~~~---~~~~~~~~ge---------~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~ 97 (232)
T 1zyb_A 31 HEDFTSILDKVK---LHFIKHKAGE---------TIIKSGN-PCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEP 97 (232)
T ss_dssp HHHHHHHHHTSC---CEEEEECTTC---------EEECTTS-BCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECG
T ss_pred HHHHHHHHhhCC---cEEEEECCCC---------EEECCCC-cccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeee
Confidence 677888875421 2444555442 1111111 24689999999998876544443 44446789998743
Q ss_pred C---CCCc-eeeeecCCCcEEEEEEe
Q 029096 138 P---AGCY-HRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 138 P---aG~~-HrF~~~~~~~~~alRlF 159 (199)
- .+.. +.++........++++-
T Consensus 98 ~~~~~~~~~~~~~~~A~~~~~v~~i~ 123 (232)
T 1zyb_A 98 QSLFGMNTNYASSYVAHTEVHTVCIS 123 (232)
T ss_dssp GGGSSSCCBCSSEEEESSCEEEEEEE
T ss_pred hHHhCCCCCCceEEEEccceEEEEEE
Confidence 2 2333 34444333345666653
No 220
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=32.31 E-value=86 Score=24.44 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=27.1
Q ss_pred cceEEEEEeceEEEEEEeCCCc-EEEEEEecCCEEEe
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK-WIRIWVKKGGMIVL 137 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~-~~ri~~~~GDlI~v 137 (199)
.+.+++|++|.......+.+++ .+--.+.+||++-.
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~ 86 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGK 86 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECC
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEee
Confidence 3679999999999887756655 33446889998853
No 221
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=32.15 E-value=10 Score=28.20 Aligned_cols=30 Identities=23% Similarity=0.367 Sum_probs=22.2
Q ss_pred EEEEec--eEEEEEEeCCCcEEEEEEecCCEEEeCC
Q 029096 106 RYCVAG--SGYFDVRDRNEKWIRIWVKKGGMIVLPA 139 (199)
Q Consensus 106 r~il~G--~g~f~v~~~~d~~~ri~~~~GDlI~vPa 139 (199)
-|++.| ||...+.+..- -.+.+||+|+|=+
T Consensus 32 TYvI~GerSG~I~lNGAAA----rl~~~GD~vII~a 63 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAAA----RKVAIGDVVIILA 63 (97)
T ss_dssp EECEEECSTTCEEEEGGGG----GGCCTTCEEEEEE
T ss_pred EEEEeeccCCeEEEchHHH----ccCCCCCEEEEEE
Confidence 578888 68888875542 3789999988743
No 222
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=30.80 E-value=38 Score=27.25 Aligned_cols=38 Identities=13% Similarity=0.236 Sum_probs=30.5
Q ss_pred EEEEeceEEEEEEeCC---------CcEEEEEEecCCEEEeCCCCce
Q 029096 106 RYCVAGSGYFDVRDRN---------EKWIRIWVKKGGMIVLPAGCYH 143 (199)
Q Consensus 106 r~il~G~g~f~v~~~~---------d~~~ri~~~~GDlI~vPaG~~H 143 (199)
.+=+-+++.|.++... +..+++.++.||+++.+.++++
T Consensus 132 svSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~ 178 (204)
T 3s57_A 132 SVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNT 178 (204)
T ss_dssp EEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHH
T ss_pred EEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhh
Confidence 4446789999998542 2457899999999999999876
No 223
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=30.14 E-value=68 Score=26.51 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=33.9
Q ss_pred CcEEEEEEecCCEEEeCCCCceeeeec---CCCcEEEEEEecCCCceee
Q 029096 122 EKWIRIWVKKGGMIVLPAGCYHRFTLD---TDNYIKAMRLFVGDPVWTP 167 (199)
Q Consensus 122 d~~~ri~~~~GDlI~vPaG~~HrF~~~---~~~~~~alRlF~~~~gW~~ 167 (199)
..++.+.+++||+++.=..+-|+-... .......+++......|.+
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~~~~y~~ 261 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYID 261 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEETTCEECC
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECCCceEcc
Confidence 457789999999999999999997542 2234566777776655554
No 224
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=29.37 E-value=59 Score=24.88 Aligned_cols=86 Identities=15% Similarity=0.037 Sum_probs=46.0
Q ss_pred hHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCC-cEEEEEEecCCEEEe
Q 029096 59 DEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNE-KWIRIWVKKGGMIVL 137 (199)
Q Consensus 59 ~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d-~~~ri~~~~GDlI~v 137 (199)
.+.++.|... ..+.++.++. ..+.+.. ..+.+++|++|.......+.++ +.+--.+.+||++-.
T Consensus 23 ~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~ 87 (232)
T 2gau_A 23 EEERELLDKE-----IQPFPCKKAS---------TVFSEGD-IPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGM 87 (232)
T ss_dssp HHHHHHHHHH-----CEEEEECTTC---------EEECTTC-CCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESH
T ss_pred HHHHHHHHhh-----CeEEEECCCC---------EEEeCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeee
Confidence 5667777652 3455555542 1122111 2367999999999887654433 334457889998743
Q ss_pred C---CCCceeeeecCCCcEEEEEEe
Q 029096 138 P---AGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 138 P---aG~~HrF~~~~~~~~~alRlF 159 (199)
. .|.++.++.........+++-
T Consensus 88 ~~~~~~~~~~~~~~A~~~~~v~~i~ 112 (232)
T 2gau_A 88 RPYFAEETCSSTAIAVENSKVLAIP 112 (232)
T ss_dssp HHHHHTSCCSSEEEESSCEEEEEEE
T ss_pred ehhhCCCCcceEEEEecceEEEEEE
Confidence 2 133444444333446666653
No 225
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=29.01 E-value=99 Score=21.43 Aligned_cols=52 Identities=8% Similarity=-0.033 Sum_probs=31.5
Q ss_pred ceEEEEEeceEEEEEEeCCCcEEEEEEecCCEEEeC---CCCceeeee-cCCCcEEEEEE
Q 029096 103 EEIRYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLP---AGCYHRFTL-DTDNYIKAMRL 158 (199)
Q Consensus 103 dEvr~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vP---aG~~HrF~~-~~~~~~~alRl 158 (199)
+.+++|++|...... .+++. ..+.+||++-.- .+..+.++. .......+++|
T Consensus 59 ~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 59 DSWYVILNGTVEISH--PDGKV--ENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp CEEEECCBSCEEEEC--SSSCE--EEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred CeEEEEEeCEEEEEc--CCCcE--EEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 668999999988764 44554 458899987432 233343444 33444555554
No 226
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=28.86 E-value=1.7e+02 Score=26.62 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=34.4
Q ss_pred EEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceeee
Q 029096 106 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRFT 146 (199)
Q Consensus 106 r~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF~ 146 (199)
+.|++|.....-.+.++- ....++++|-.-|-+-+.|.|+
T Consensus 358 Y~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE
T ss_pred EEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc
Confidence 457889888888766554 7899999999999999999998
No 227
>4dsd_A Putative periplasmic protein; BLIP-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.75A {Bacteroides ovatus}
Probab=28.64 E-value=84 Score=23.56 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=29.7
Q ss_pred eeEEECCCCCCChHHHHhccccccccCcceEEEEEece----EEEEEEe---------CCCcEEEEEEecC
Q 029096 75 DFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGS----GYFDVRD---------RNEKWIRIWVKKG 132 (199)
Q Consensus 75 Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~----g~f~v~~---------~~d~~~ri~~~~G 132 (199)
|...|++..+| ...+.|...|.-...-+..-.+.. +.|.|.- .+|.|..|.++.+
T Consensus 3 ~d~~i~~~~LP---~~a~~fi~~~Fp~~~i~~ve~e~~~~~~~~YeV~l~~G~ei~Fd~~G~W~ev~~~~~ 70 (129)
T 4dsd_A 3 DVITKDMNQLP---LPARNFINSNFTKPQVAHIKIDKDMMESTKYEVVLMDGTEIDFDSKGNWEEVSAKKG 70 (129)
T ss_dssp CEEECCGGGSC---HHHHHHHHHHSSSCCEEEEEEEECTTSCEEEEEEETTSCEEEECTTSCEEEEECCTT
T ss_pred CceEcChhhCC---HHHHHHHHHHCCCCceEEEEEecCcCCCccEEEEECCCcEEEEeCCCCEEEEecCcC
Confidence 55667777666 555666666665443333333322 3444432 3566777766554
No 228
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=28.49 E-value=2.4e+02 Score=24.00 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=43.6
Q ss_pred hcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEeceEEEEEEeCCCcEEEEEEec--------CCEEEeCC
Q 029096 68 DRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVAGSGYFDVRDRNEKWIRIWVKK--------GGMIVLPA 139 (199)
Q Consensus 68 e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~G~g~f~v~~~~d~~~ri~~~~--------GDlI~vPa 139 (199)
.-.|...+++.|.++.. +...+-..|=+...|.|.+.+.+. ++.+...... .|.+.||.
T Consensus 25 ~~~y~~f~~~~L~~Ge~----------~~~~~~~~E~~iv~l~G~~~V~~~---g~~~~~~g~R~svF~~~~p~~lYvp~ 91 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGES----------ITLPSDERERCLVLVAGLASVXAA---DSFFYRIGQRMSPFERIPAYSVYLPH 91 (270)
T ss_dssp TSSSCEEEEEEECTTCE----------EEECCSSEEEEEEEEESCEEEEET---TEEEEEECCCSSGGGCSCCCEEEECS
T ss_pred CcEEeEEEEEEecCCCE----------EEecCCCcEEEEEEecceEEEEEC---CEEEeccccccccccCCCCcEEEECC
Confidence 34566778888887631 222222235566678999988884 4444333333 59999999
Q ss_pred CCceeeeecC
Q 029096 140 GCYHRFTLDT 149 (199)
Q Consensus 140 G~~HrF~~~~ 149 (199)
|..=.|+...
T Consensus 92 g~~v~i~a~~ 101 (270)
T 2qjv_A 92 HTEAXVTAET 101 (270)
T ss_dssp SCCEEEEESS
T ss_pred CCEEEEEecC
Confidence 9966666544
No 229
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=28.09 E-value=1.2e+02 Score=24.00 Aligned_cols=34 Identities=12% Similarity=-0.064 Sum_probs=25.4
Q ss_pred ceEEEEEeceEEEEEEeCCC--cEEEEEEecCCEEE
Q 029096 103 EEIRYCVAGSGYFDVRDRNE--KWIRIWVKKGGMIV 136 (199)
Q Consensus 103 dEvr~il~G~g~f~v~~~~d--~~~ri~~~~GDlI~ 136 (199)
+.+++|++|+........++ ...--.+.+||++=
T Consensus 199 ~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fG 234 (291)
T 2qcs_B 199 DEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFG 234 (291)
T ss_dssp CEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEEC
T ss_pred CEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEec
Confidence 67899999999887654443 24456789999873
No 230
>2lnu_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Haloarcula marismortui}
Probab=27.83 E-value=1.7e+02 Score=23.80 Aligned_cols=79 Identities=15% Similarity=0.234 Sum_probs=49.2
Q ss_pred CCCcCCHhHHhhc-CeEEEEeCCCCccChHHHHHHHHhcCCCeeeeEEECCCCCCChHHHHhccccccccCcceEEEEEe
Q 029096 32 PKEFVSLDQLSEL-GVLSWRLDADNYETDEELKKIREDRGYSYMDFCEVCPEKLPNYEEKIKNFFEEHLHTDEEIRYCVA 110 (199)
Q Consensus 32 p~~~v~~~~L~~l-GV~~w~~~~~~~~~~~~l~~l~~e~gY~~~Dvv~i~p~~~p~~e~~~~~f~~eH~H~ddEvr~il~ 110 (199)
|..+++.++++.. |+.|+..|+. |...=.++..++. +.+-.... +.-+..|.+-
T Consensus 27 p~sPl~~~~r~~F~Gl~~fp~Dp~----------------wrv~a~~~~~~~~--------~~~~v~t~-~g~~~~~~~~ 81 (190)
T 2lnu_A 27 RQSPIPPEERDDFDGLSYFDPDPD----------------YRVEATVTVHETP--------ESVDLETS-DDRTVRYLHV 81 (190)
T ss_dssp SCCCSCTTHHHHCCSCCCCCCCGG----------------GEEEEEEEECSSC--------CEEEEECS-SSSEEEEEEE
T ss_pred ccCCCChhHHhcCCCCccCCCCCC----------------EEEEEEEEECCCC--------cEEEEEec-CCceEEEEEe
Confidence 4455666777665 8888776642 3333333333331 23334444 6788999999
Q ss_pred ceEEEEEEeCCCcEEEEEE-----ecCCEEEeC
Q 029096 111 GSGYFDVRDRNEKWIRIWV-----KKGGMIVLP 138 (199)
Q Consensus 111 G~g~f~v~~~~d~~~ri~~-----~~GDlI~vP 138 (199)
|...|.+. |+.+++.+ +.|+-|.||
T Consensus 82 G~~~F~l~---G~~~~L~~~~~~~~~~~~Lflp 111 (190)
T 2lnu_A 82 ATLSFDLD---GESRDLHAFRQAADESRTLFVP 111 (190)
T ss_dssp EEEEEEET---TEEEEEEEEESSSCCSCCEEEE
T ss_pred EEEEEEEC---CEEEEEEEEecccCCCCeEEEE
Confidence 99999984 56666766 346656665
No 231
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=26.96 E-value=55 Score=26.72 Aligned_cols=40 Identities=10% Similarity=0.245 Sum_probs=31.0
Q ss_pred cEEEEEEecCCEEEeCCCCceeeee--c-CCCcEEEEEEecCC
Q 029096 123 KWIRIWVKKGGMIVLPAGCYHRFTL--D-TDNYIKAMRLFVGD 162 (199)
Q Consensus 123 ~~~ri~~~~GDlI~vPaG~~HrF~~--~-~~~~~~alRlF~~~ 162 (199)
.++.+.+++||+++.=..+.|+-.. + .......+++....
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~ 268 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEAS 268 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEECT
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcCC
Confidence 5788999999999999999999742 2 23456778877764
No 232
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=26.46 E-value=23 Score=22.41 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=20.2
Q ss_pred EEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCceeecC
Q 029096 127 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 169 (199)
Q Consensus 127 i~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~~~~ 169 (199)
+.+++||+|.|-. ...+.......+-++..||.|-|
T Consensus 20 Ls~~~Gd~i~v~~-------~~~~~W~~g~~~~~g~~G~fP~~ 55 (62)
T 2fpe_A 20 LELEVDDPLLVEL-------QAEDYWYEAYNMRTGARGVFPAY 55 (62)
T ss_dssp CCBCTTCEEEEEE-------ECTTSEEEEEETTTCCEEEEEGG
T ss_pred CcCCCCCEEEEEE-------ecCCCEEEEEECCCCCEEEechH
Confidence 5677888887731 12233444444445666777643
No 233
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=26.22 E-value=32 Score=25.88 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=20.8
Q ss_pred EeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceee
Q 029096 109 VAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRF 145 (199)
Q Consensus 109 l~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF 145 (199)
--|.|.|.|. +..+ .|++|+.|.|+..|-
T Consensus 20 ~y~~g~f~i~---g~~~-----~g~i~v~p~~~~~W~ 48 (128)
T 2fi9_A 20 AYGNGGFRFA---DMSH-----RGSIICIPSGIYGID 48 (128)
T ss_dssp EEETTEEEET---TEEE-----ESEEEEETTEEEEEC
T ss_pred EEcCCEEEEC---CEEE-----EeCEEEeCCCeeccC
Confidence 3456667774 4433 499999999998884
No 234
>2cw8_A Endonuclease PI-pkoii; hydrolase; 2.50A {Thermococcus kodakarensis} PDB: 2cw7_A
Probab=26.21 E-value=63 Score=29.72 Aligned_cols=16 Identities=19% Similarity=0.374 Sum_probs=13.6
Q ss_pred EecCCEEEeCCCCcee
Q 029096 129 VKKGGMIVLPAGCYHR 144 (199)
Q Consensus 129 ~~~GDlI~vPaG~~Hr 144 (199)
+++||.|.+|..+.+-
T Consensus 114 lk~GD~v~~~~~~~~~ 129 (537)
T 2cw8_A 114 LKPGDLVAVPRRLELP 129 (537)
T ss_dssp CCTTCEEEEESCCCCC
T ss_pred CCCCCEEEEeeecCCc
Confidence 6789999999988774
No 235
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=24.73 E-value=1.3e+02 Score=24.04 Aligned_cols=57 Identities=11% Similarity=-0.019 Sum_probs=35.1
Q ss_pred ceEEEEEeceEEEEEEe-CCC-cEEEEEEecCCEEEeC---CCCceeeeecCCCcEEEEEEe
Q 029096 103 EEIRYCVAGSGYFDVRD-RNE-KWIRIWVKKGGMIVLP---AGCYHRFTLDTDNYIKAMRLF 159 (199)
Q Consensus 103 dEvr~il~G~g~f~v~~-~~d-~~~ri~~~~GDlI~vP---aG~~HrF~~~~~~~~~alRlF 159 (199)
+.+++|++|+....... .++ ..+--.+.+||++--- .|.++..+........+++|-
T Consensus 199 ~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~ 260 (299)
T 3shr_A 199 DTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVID 260 (299)
T ss_dssp CEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEEE
T ss_pred CEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEEe
Confidence 67899999999888764 233 3444578999987321 234444444444445555553
No 236
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=24.50 E-value=34 Score=21.92 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=21.6
Q ss_pred EEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCceeecC
Q 029096 127 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 169 (199)
Q Consensus 127 i~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~~~~ 169 (199)
+.+++||+|.|=... ..+....+-+.-.+..||.|-|
T Consensus 25 Lsf~~Gd~i~v~~~~------~~~gW~~g~~~~~g~~G~fP~~ 61 (67)
T 3rnj_A 25 LSFKEGDLITLLVPE------ARDGWHYGESEKTKMRGWFPFS 61 (67)
T ss_dssp CCBCTTCEEEECSSS------CBTTEEEEEETTTCCEEEEEGG
T ss_pred ccCCCCCEEEEeecc------CCCCCEEEEECCCCCEEEEEHH
Confidence 678899998874321 1223344444445667888744
No 237
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=24.45 E-value=33 Score=21.91 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=19.1
Q ss_pred EEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCceeecC
Q 029096 127 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPFN 169 (199)
Q Consensus 127 i~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~~~~ 169 (199)
+.+++||+|.|-.. ..+....+-..-.+..||+|-|
T Consensus 23 Ls~~~Gd~i~v~~~-------~~~gW~~g~~~~~g~~G~~P~~ 58 (65)
T 2j05_A 23 ISFLKGDMFIVHNE-------LEDGWMWVTNLRTDEQGLIVED 58 (65)
T ss_dssp CCBCTTCEEEEEEE-------CTTSEEEEEETTTCCEEEEEGG
T ss_pred CcCCCCCEEEEeEe-------cCCCEEEEEECCCCCEEEEEhH
Confidence 56777777766431 1223334433345566777743
No 238
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=24.21 E-value=58 Score=26.48 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=30.3
Q ss_pred CcEEEEEEecCCEEEeCCCCceeeeecCCC------cEEEEEEecC
Q 029096 122 EKWIRIWVKKGGMIVLPAGCYHRFTLDTDN------YIKAMRLFVG 161 (199)
Q Consensus 122 d~~~ri~~~~GDlI~vPaG~~HrF~~~~~~------~~~alRlF~~ 161 (199)
..++.+.+++||+++.=..+.|+-....++ ....+|+...
T Consensus 208 ~~~v~~~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 208 EHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp SCEECCCCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred CceeecccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecC
Confidence 457889999999999999999997643222 3667777765
No 239
>2cyj_A Hypothetical protein PH1505; conserved hypothetical protein, structural genomics, NPPSFA; HET: OCS; 1.50A {Pyrococcus horikoshii} SCOP: c.103.1.1
Probab=23.52 E-value=37 Score=25.33 Aligned_cols=23 Identities=17% Similarity=0.355 Sum_probs=17.0
Q ss_pred ceEEEEEEeCCCcEEEEEEecCCEEEeCCCC
Q 029096 111 GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGC 141 (199)
Q Consensus 111 G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~ 141 (199)
|.|+|.|. ++ .-.||+|+.|.|+
T Consensus 7 g~G~~~i~---g~-----~~~~sviv~p~g~ 29 (118)
T 2cyj_A 7 RFGLVKID---GK-----EFDHDIVIYPSGR 29 (118)
T ss_dssp ETTEEEET---TE-----EESSCEEECTTSC
T ss_pred cCCEEEEC---CE-----EEeeCEEEeCCCc
Confidence 56677774 43 3459999999998
No 240
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=23.37 E-value=59 Score=26.96 Aligned_cols=15 Identities=13% Similarity=-0.048 Sum_probs=11.3
Q ss_pred EEecCCEEEeCCCCc
Q 029096 128 WVKKGGMIVLPAGCY 142 (199)
Q Consensus 128 ~~~~GDlI~vPaG~~ 142 (199)
.+.|||.|+||-...
T Consensus 191 ~l~PG~~I~Vp~~~~ 205 (236)
T 3p42_A 191 EPPPGSQLWLGFSAH 205 (236)
T ss_dssp ECCTTCEEEECBCTT
T ss_pred CCCCCCEEEEeCCcc
Confidence 577888888887654
No 241
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=23.14 E-value=42 Score=26.32 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=19.2
Q ss_pred EEEEeceEEEEEEeCCCcEEEEEEecCCEEEeCCCCc
Q 029096 106 RYCVAGSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCY 142 (199)
Q Consensus 106 r~il~G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~ 142 (199)
+|+.+|...-.+. .+ .+++||.|.+|.|..
T Consensus 105 ~~v~~~g~~~w~~-A~------eLk~GD~v~~~~~~~ 134 (186)
T 2jmz_A 105 VYISKTGEVLEIN-AE------MVKVGDYIYIPKNNT 134 (186)
T ss_dssp EEEEETTEEEEEE-GG------GCCTTSEEEEECSSS
T ss_pred EEEeCCCeEEEEE-hh------cCCCCCEEEecccCC
Confidence 5666554333443 22 378999999998643
No 242
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=22.91 E-value=1.7e+02 Score=25.06 Aligned_cols=57 Identities=14% Similarity=0.028 Sum_probs=37.5
Q ss_pred cceEEEEEeceEEEEEEeCCCc---EEEEEEecCCEEEeCC--CCceeeeecCCCcEEEEEE
Q 029096 102 DEEIRYCVAGSGYFDVRDRNEK---WIRIWVKKGGMIVLPA--GCYHRFTLDTDNYIKAMRL 158 (199)
Q Consensus 102 ddEvr~il~G~g~f~v~~~~d~---~~ri~~~~GDlI~vPa--G~~HrF~~~~~~~~~alRl 158 (199)
.+.+++|++|.........+++ .+--.+.+||++--.+ |.++..+.........++|
T Consensus 83 ~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i 144 (469)
T 1o7f_A 83 GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRI 144 (469)
T ss_dssp CCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEE
T ss_pred CCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEE
Confidence 3679999999999888655552 4556788999886544 3334444433444666665
No 243
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=22.59 E-value=1.7e+02 Score=20.29 Aligned_cols=41 Identities=7% Similarity=0.022 Sum_probs=28.2
Q ss_pred hHHhhcCeEEEEeCCCCccChHHHHHHHHh-cCCCeeeeEEECC
Q 029096 39 DQLSELGVLSWRLDADNYETDEELKKIRED-RGYSYMDFCEVCP 81 (199)
Q Consensus 39 ~~L~~lGV~~w~~~~~~~~~~~~l~~l~~e-~gY~~~Dvv~i~p 81 (199)
+.|.+.||.|-.++.+.. .+..+.+.+. .|..+.=+|.+.-
T Consensus 22 ~~L~~~gi~y~~idi~~d--~~~~~~~~~~~~G~~tVP~I~i~D 63 (92)
T 2lqo_A 22 TALTANRIAYDEVDIEHN--RAAAEFVGSVNGGNRTVPTVKFAD 63 (92)
T ss_dssp HHHHHTTCCCEEEETTTC--HHHHHHHHHHSSSSSCSCEEEETT
T ss_pred HHHHhcCCceEEEEcCCC--HHHHHHHHHHcCCCCEeCEEEEeC
Confidence 678999999977776542 3444555443 3888888888853
No 244
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=21.76 E-value=45 Score=24.74 Aligned_cols=23 Identities=17% Similarity=0.219 Sum_probs=16.7
Q ss_pred ceEEEEEEeCCCcEEEEEEecCCEEEeCCCC
Q 029096 111 GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGC 141 (199)
Q Consensus 111 G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~ 141 (199)
|.|+|.|. ++. -.||+|+.|.|+
T Consensus 8 g~G~~~i~---g~~-----~~~sviv~p~g~ 30 (113)
T 1ihn_A 8 RFGSVTYR---GRE-----YRSDIVVHVDGS 30 (113)
T ss_dssp ETTEEEET---TEE-----ECSCEEECTTSC
T ss_pred cCCEEEEC---CEE-----EeeCEEEeCCCc
Confidence 55667774 433 359999999998
No 245
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=21.71 E-value=98 Score=27.62 Aligned_cols=46 Identities=20% Similarity=0.295 Sum_probs=32.4
Q ss_pred cEEEEEEecCCEEEeCCCCceee-eecCCCcEEEEEEecCCCceeecCCC
Q 029096 123 KWIRIWVKKGGMIVLPAGCYHRF-TLDTDNYIKAMRLFVGDPVWTPFNRP 171 (199)
Q Consensus 123 ~~~ri~~~~GDlI~vPaG~~HrF-~~~~~~~~~alRlF~~~~gW~~~~r~ 171 (199)
.+.++.-++|++|++-+|.||+- ..|-+ .-.++ .-..+.|.++.+.
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn-~aEAv--NFA~~~Wl~~g~~ 306 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFN-CAEAI--NFATPRWIDYGKM 306 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSE-EEEEE--EECCGGGHHHHHH
T ss_pred ceEEEEeCCCcEEEECCCceEEEeecccc-HhHhh--ccCcHHHHHhhhh
Confidence 35688999999999999999985 44433 33444 3345669887554
No 246
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=21.49 E-value=33 Score=26.25 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=19.5
Q ss_pred ceEEEEEEeCCCcEEEEEEecCCEEEeCCCCceee
Q 029096 111 GSGYFDVRDRNEKWIRIWVKKGGMIVLPAGCYHRF 145 (199)
Q Consensus 111 G~g~f~v~~~~d~~~ri~~~~GDlI~vPaG~~HrF 145 (199)
|.|.|.|. +..+ .|++|+.|.|+..|-
T Consensus 20 ~~g~f~in---g~~~-----~gsilv~p~~~~~W~ 46 (135)
T 2fvt_A 20 GKGGFYFA---GMSH-----QGSLLFLPDAVWGWD 46 (135)
T ss_dssp ETTEEECS---SSEE-----CSEEEECSSCEEEES
T ss_pred cCCEEEEC---CEEE-----EeCEEEeCCCccccC
Confidence 45566663 4443 499999999998885
No 247
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=20.06 E-value=28 Score=21.99 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=18.1
Q ss_pred EEEecCCEEEeCCCCceeeeecCCCcEEEEEEecCCCceeec
Q 029096 127 IWVKKGGMIVLPAGCYHRFTLDTDNYIKAMRLFVGDPVWTPF 168 (199)
Q Consensus 127 i~~~~GDlI~vPaG~~HrF~~~~~~~~~alRlF~~~~gW~~~ 168 (199)
+.+++||+|.|-..... ...+-.+-.+..||+|-
T Consensus 23 Ls~~~Gd~i~v~~~~~~--------Ww~g~~~~~g~~G~~P~ 56 (62)
T 2iim_A 23 LGFEKGEQLRILEQSGE--------WWKAQSLTTGQEGFIPF 56 (62)
T ss_dssp CCBCTTCEEEEEECCSS--------EEEEEETTTCCEEEEEG
T ss_pred cCCCCCCEEEEEEcCCC--------EEEEEECCCCCEEEEEH
Confidence 56677777776543222 33333323455677764
Done!