BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029103
(199 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2
SV=1
Length = 200
Score = 289 bits (740), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 160/200 (80%), Gaps = 1/200 (0%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA +S+ N+ KLVLLGDMG GK+SLV+RFVKGQF +FQESTIGAAFF+ L++N T+K
Sbjct: 1 MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDITS DSF RAKKWVQELQ+QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ- 179
NK DLE++RKV EE LYA+ENGL F+ETSAK+A NVN +FYEIAKRL P++
Sbjct: 121 AGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPAQNP 180
Query: 180 TGMKLHTESHGGGRRGFCCS 199
GM L + G R CC+
Sbjct: 181 AGMVLVDRAAEGTRATSCCT 200
>sp|P29687|RAB5_TOBAC Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1
Length = 200
Score = 285 bits (728), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 158/200 (79%), Gaps = 1/200 (0%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA + N+ KLVLLGDMG GK+SLV+RFVKGQF +FQESTIGAAFF+ +S+N T+K
Sbjct: 1 MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++VYDITS +S RAKKWVQELQ+QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ- 179
NK DLE+KRKV EE LYA+ENGL F+ETSAK+A NVN++FYEIAKRL P++
Sbjct: 121 AGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPRAQPAQNP 180
Query: 180 TGMKLHTESHGGGRRGFCCS 199
GM L + G + CC+
Sbjct: 181 AGMVLEDKPAQGSQAASCCT 200
>sp|P31582|RAF2A_ARATH Ras-related protein RABF2a OS=Arabidopsis thaliana GN=RABF2A PE=1
SV=1
Length = 200
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 156/200 (78%), Gaps = 1/200 (0%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA + NKNI KLVLLGD+G GK+SLVLRFVK QF +FQESTIGAAFF+Q L++N+ T+K
Sbjct: 1 MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++V+DIT+ SFERAKKWVQELQ QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ- 179
NK DL + RKV EE E+YAQEN L F+ETSAK+A NV ++FYEIAKRL V P+
Sbjct: 121 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENP 180
Query: 180 TGMKLHTESHGGGRRGFCCS 199
TGM L CC+
Sbjct: 181 TGMVLPNGPGATAVSSSCCA 200
>sp|Q9SN68|RAF2B_ARATH Ras-related protein RABF2b OS=Arabidopsis thaliana GN=RABF2B PE=1
SV=1
Length = 200
Score = 276 bits (705), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 129/200 (64%), Positives = 156/200 (78%), Gaps = 1/200 (0%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
MA NK+I KLVLLGD+G GK+SLVLRFVK QF +FQESTIGAAFF+Q L++N+ T+K
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFL 120
F+IWDTAGQERYHSLAPMYYRGAAAA++V+D+T+ SFERAKKWVQELQ QGNPN++M L
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 VANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ- 179
NK DL + RKV E+ + YAQENGL F+ETSAK+A NV E+FYEIA+RL V P+
Sbjct: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180
Query: 180 TGMKLHTESHGGGRRGFCCS 199
TGM L + CC+
Sbjct: 181 TGMVLPDRAMDRAVSSSCCA 200
>sp|Q86JP3|RAB5A_DICDI Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A
PE=3 SV=1
Length = 201
Score = 251 bits (640), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 151/198 (76%), Gaps = 3/198 (1%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
+NK Q KLVLLG+ GK+SLVLRFV+G F D+QESTIGAAF Q + LN+ T+KF+IW
Sbjct: 4 NNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIW 63
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYH+LAPMYYRGA AA+VVYDI S DSFERA KWV+ELQRQG+PN+++ L NK
Sbjct: 64 DTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNK 123
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKL 184
+DL KRKV+ E + YA+ENGL F+ETSAK++ NVNELF EIAK+L + +R ++
Sbjct: 124 LDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKTPTTRPGSGRV 183
Query: 185 ---HTESHGGGRRGFCCS 199
++ G++ CC+
Sbjct: 184 AIAPIDNGNTGKKNKCCN 201
>sp|P51147|RAB5C_CANFA Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1
Length = 216
Score = 246 bits (627), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 146/201 (72%), Gaps = 9/201 (4%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRL-------AEVNPSR 178
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F IAK+L A PSR
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPSR 196
Query: 179 QTGMKLHTESHGGGRRGFCCS 199
G+ L S R CCS
Sbjct: 197 NRGVDLQENSPAS--RSQCCS 215
>sp|Q5R7L7|RAB5C_PONAB Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1
Length = 216
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 145/199 (72%), Gaps = 5/199 (2%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMK-- 183
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F IAK+L + P TG
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGR 196
Query: 184 ---LHTESHGGGRRGFCCS 199
+ + + R CCS
Sbjct: 197 NRGVDLQENNPASRSQCCS 215
>sp|P51148|RAB5C_HUMAN Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2
Length = 216
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 145/199 (72%), Gaps = 5/199 (2%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMK-- 183
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F IAK+L + P TG
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGR 196
Query: 184 ---LHTESHGGGRRGFCCS 199
+ + + R CCS
Sbjct: 197 NRGVDLQENNPASRSQCCS 215
>sp|Q58DS9|RAB5C_BOVIN Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1
Length = 216
Score = 244 bits (622), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 145/199 (72%), Gaps = 5/199 (2%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMK-- 183
DL KR V+ +E + YA++N L F+ETSAK+A NVNE+F IAK+L + P G
Sbjct: 137 DLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGR 196
Query: 184 ---LHTESHGGGRRGFCCS 199
+ + + R CCS
Sbjct: 197 NRGVDLQENNPASRSQCCS 215
>sp|P35278|RAB5C_MOUSE Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2
Length = 216
Score = 243 bits (621), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 143/199 (71%), Gaps = 5/199 (2%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLH 185
DL KR V+ +E + YA +N L F+ETSAK+A NVNE+F IAK+L + P G
Sbjct: 137 DLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGR 196
Query: 186 T-----ESHGGGRRGFCCS 199
T + R CCS
Sbjct: 197 TRGVDLQESNPASRSQCCS 215
>sp|Q5RBG1|RAB5B_PONAB Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1
Length = 215
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 148/202 (73%), Gaps = 9/202 (4%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS------- 177
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF IAK+L + P
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAG 194
Query: 178 RQTGMKLHTESHGGGRRGFCCS 199
R G+ LH +S + CCS
Sbjct: 195 RSRGVDLHEQSQQN--KSQCCS 214
>sp|P61021|RAB5B_MOUSE Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1
Length = 215
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 148/202 (73%), Gaps = 9/202 (4%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS------- 177
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF IAK+L + P
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAG 194
Query: 178 RQTGMKLHTESHGGGRRGFCCS 199
R G+ LH +S + CCS
Sbjct: 195 RSRGVDLHEQSQQN--KSQCCS 214
>sp|P61020|RAB5B_HUMAN Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1
Length = 215
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 148/202 (73%), Gaps = 9/202 (4%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS------- 177
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF IAK+L + P
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAG 194
Query: 178 RQTGMKLHTESHGGGRRGFCCS 199
R G+ LH +S + CCS
Sbjct: 195 RSRGVDLHEQSQQN--KSQCCS 214
>sp|Q5ZHW4|RAB5B_CHICK Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1
Length = 215
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 148/202 (73%), Gaps = 9/202 (4%)
Query: 5 SNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIW 64
++K Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IW
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 65 DTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANK 124
DTAGQERYHSLAPMYYRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 125 VDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS------- 177
DL KR V+ EE + YA +N L F+ETSAK+A NVN+LF IAK+L + P
Sbjct: 135 ADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAG 194
Query: 178 RQTGMKLHTESHGGGRRGFCCS 199
R G+ LH ++ + CCS
Sbjct: 195 RSRGVDLHEQTQQN--KSQCCS 214
>sp|Q9CQD1|RAB5A_MOUSE Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1
Length = 215
Score = 239 bits (611), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 146/203 (71%), Gaps = 9/203 (4%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP------- 176
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F IAK+L + P
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANS 193
Query: 177 SRQTGMKLHTESHGGGRRGFCCS 199
+R G+ L + R CCS
Sbjct: 194 ARGRGVDLTEPAQPA--RSQCCS 214
>sp|Q06AU6|RAB5A_PIG Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1
Length = 215
Score = 239 bits (610), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 147/203 (72%), Gaps = 9/203 (4%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE-------VNP 176
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F IAK+L + +N
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGINC 193
Query: 177 SRQTGMKLHTESHGGGRRGFCCS 199
+R G+ L + R CCS
Sbjct: 194 TRGRGVDLTEPTQ--PTRSQCCS 214
>sp|Q0IIG7|RAB5A_BOVIN Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1
Length = 215
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 146/203 (71%), Gaps = 9/203 (4%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP------- 176
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F IAK+L + P
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANS 193
Query: 177 SRQTGMKLHTESHGGGRRGFCCS 199
+R G+ L + R CCS
Sbjct: 194 TRGRGVDLTEPTQ--PTRSQCCS 214
>sp|P61271|RAB5A_MACFA Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2
SV=1
Length = 215
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 146/203 (71%), Gaps = 9/203 (4%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP------- 176
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F IAK+L + P
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANS 193
Query: 177 SRQTGMKLHTESHGGGRRGFCCS 199
+R G+ L + R CCS
Sbjct: 194 ARGRGVDLTEPTQ--PTRSQCCS 214
>sp|P18066|RAB5A_CANFA Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1
Length = 215
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 146/203 (71%), Gaps = 9/203 (4%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP------- 176
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F IAK+L + P
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANS 193
Query: 177 SRQTGMKLHTESHGGGRRGFCCS 199
+R G+ L + R CCS
Sbjct: 194 ARGRGVDLTEPTQ--PTRSQCCS 214
>sp|P20339|RAB5A_HUMAN Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2
Length = 215
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 146/203 (71%), Gaps = 9/203 (4%)
Query: 4 TSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDI 63
T NK Q KLVLLG+ GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+I
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVAN 123
WDTAGQERYHSLAPMYYRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L N
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP------- 176
K DL KR V +E + YA +N L F+ETSAK++ NVNE+F IAK+L + P
Sbjct: 134 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANS 193
Query: 177 SRQTGMKLHTESHGGGRRGFCCS 199
+R G+ L + R CCS
Sbjct: 194 ARGRGVDLTEPTQ--PTRNQCCS 214
>sp|Q98932|RAB5C_CHICK Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1
Length = 216
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 143/201 (71%), Gaps = 9/201 (4%)
Query: 6 NKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWD 65
NK Q KLVLLG+ GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWD
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERYHSLAPMYYRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKA 136
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTG---- 181
DL KR V ++ + YA +N L F+ETSAK+A NVNE+F IAK+L + P G
Sbjct: 137 DLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGR 196
Query: 182 ---MKLHTESHGGGRRGFCCS 199
+ L S R CCS
Sbjct: 197 NRVVDLQESSQPS--RSQCCS 215
>sp|Q9CB01|RABF1_ARATH Ras-related protein RABF1 OS=Arabidopsis thaliana GN=RABF1 PE=1
SV=1
Length = 202
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 7 KNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNE-VTIKFDIWD 65
KN++VKLVLLGD G GK+ +VLRFV+GQF + T+GA+F +Q ++L + T+KF+IWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKV 125
TAGQERY +LAP+YYRGA AV+VYDITS +SF++A+ WV+ELQ+ G+P+++M LV NK
Sbjct: 90 TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS 177
DL EKR+V E+G A++NG+ F+ETSAK+A N+N+LF EI KRL PS
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAPS 201
>sp|P36586|YPT5_SCHPO GTP-binding protein ypt5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt5 PE=1 SV=1
Length = 211
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 136/205 (66%), Gaps = 11/205 (5%)
Query: 4 TSNKN---IQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVT-I 59
T+ KN I KLVLLGD GK+SLVLRFVK QF D++ESTIGAAF TQ L ++E T +
Sbjct: 5 TAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSV 64
Query: 60 KFDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMF 119
K +IWDTAGQERY SLAPMYYR A A+VVYDIT S E+AK W++ELQRQ +++
Sbjct: 65 KLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIA 124
Query: 120 LVANKVDL-EEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLA---EVN 175
L NK+DL +E+R V+ + E YA E L F ETSAK+A NVNELF IAK+L ++N
Sbjct: 125 LAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLN 184
Query: 176 PSR---QTGMKLHTESHGGGRRGFC 197
+R G+ L G C
Sbjct: 185 QARGAVNRGVNLSEARPAAQPSGSC 209
>sp|P36017|VPS21_YEAST Vacuolar protein sorting-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS21 PE=1
SV=1
Length = 210
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 122/164 (74%), Gaps = 3/164 (1%)
Query: 11 VKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQE 70
+KLVLLG+ GK+S+VLRFV F + +E TIGAAF TQ +++NE T+KF+IWDTAGQE
Sbjct: 8 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 67
Query: 71 RYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE- 129
R+ SLAPMYYR A AA+VVYD+T SF +A+ WV+EL Q + ++I+ LV NK+D+ +
Sbjct: 68 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 127
Query: 130 --KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRL 171
+RKV EEGE A+E GL F ETSAK+ NVN++F I +++
Sbjct: 128 GGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 171
>sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=1 SV=2
Length = 194
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 126/192 (65%), Gaps = 5/192 (2%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+HSLAPMYYRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL +
Sbjct: 65 ERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP---SRQTGMKLHT 186
R+V ++ + YA+ G +ETSAK+A N+ ELF I++++ ++P G+KL
Sbjct: 125 IREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKLGN 184
Query: 187 ESHGGGRRGFCC 198
+S GRR CC
Sbjct: 185 QSLQAGRR--CC 194
>sp|Q921E2|RAB31_MOUSE Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1
Length = 194
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 124/192 (64%), Gaps = 5/192 (2%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+HSLAPMYYRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL +
Sbjct: 65 ERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSR---QTGMKLHT 186
R+V ++ + YA+ G +ETSAK+A N+ ELF I++++ + P G+KL
Sbjct: 125 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKLGN 184
Query: 187 ESHGGGRRGFCC 198
+S RR CC
Sbjct: 185 QSLQASRR--CC 194
>sp|Q54RX9|RAB5B_DICDI Putative ras-related protein Rab-5B OS=Dictyostelium discoideum
GN=rab5B PE=5 SV=1
Length = 214
Score = 179 bits (455), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 115/163 (70%), Gaps = 3/163 (1%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLVLLG+M TGKT + R V+ +F +STIGAAF + + ++ + IK +IWDTAGQER
Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQER 109
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
Y SL PMYYRGAAAAVVVYDIT ++FE K+WV ELQ+ +PNLI+ L NKVDL R
Sbjct: 110 YRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDL-PNR 168
Query: 132 KVKNEEGELYAQENGLS-FLETSAKSAHNVNELFYEIAKRLAE 173
+V+ +E Y E G + F ETSA S N+NELF EI +RL E
Sbjct: 169 EVQVDEVNRYISELGNAIFFETSAASGQNINELFTEICRRLIE 211
>sp|Q13636|RAB31_HUMAN Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1
Length = 194
Score = 176 bits (446), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+HSLAPMYYRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL +
Sbjct: 65 ERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTG---MKLHT 186
R+V ++ + YA+ G +ETSAK+A N+ ELF I++++ ++P +K+
Sbjct: 125 IREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEK 184
Query: 187 ESHGGGRRGFCC 198
+ RR CC
Sbjct: 185 PTMQASRR--CC 194
>sp|P36018|YPT52_YEAST GTP-binding protein YPT52 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT52 PE=1 SV=1
Length = 234
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 135/216 (62%), Gaps = 31/216 (14%)
Query: 9 IQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLN--------EVTIK 60
+Q KLVLLGD GK+S+V RFVK F + +ESTIGAAF +Q ++++ +V IK
Sbjct: 2 LQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIK 61
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQ-GNPNLIMF 119
F+IWDTAGQERY SLAPMYYR A AA+VVYDIT DS ++A+ WV EL+ + G+ +L+++
Sbjct: 62 FEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIY 121
Query: 120 LVANKVDL-----------------EEKRKVK---NEEGELYAQENGLSFLETSAKSAHN 159
L+ NKVDL +E++KV+ EE + YAQE GL F E SAK+
Sbjct: 122 LLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEG 181
Query: 160 VNELFYEIAKRLAEVNPSRQTGMKLHTESHGGGRRG 195
V E+F +I ++L ++ + + GGG G
Sbjct: 182 VKEIFQDIGEKLYDL--KKDEILSKQNRQIGGGNNG 215
>sp|Q9UL26|RB22A_HUMAN Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2
Length = 194
Score = 173 bits (438), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 5/192 (2%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+ +LAPMYYRG+AAA++VYDIT ++F K WV+EL++ G PN+++ + NK DL +
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVN---PSRQTGMKLHT 186
R+V + + YA F+ETSAK+A N+NELF EI++R+ + PS G KL
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGFKLRR 184
Query: 187 ESHGGGRRGFCC 198
+ R CC
Sbjct: 185 QPSEPKRS--CC 194
>sp|P35285|RB22A_MOUSE Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2
Length = 194
Score = 170 bits (430), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
ER+ +LAPMYYRG+AAA++VYDIT ++F K WV+EL++ G P++++ + NK DL +
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTD 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLA--EVNP-SRQTGMKLHT 186
R+V + + YA F+ETSAK+A N+NELF EI++R+ + NP S G KL
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRR 184
Query: 187 ESHGGGRRGFCC 198
+ R CC
Sbjct: 185 QPSEPKRS--CC 194
>sp|P51154|RB22A_CANFA Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1
Length = 194
Score = 169 bits (429), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 121/192 (63%), Gaps = 5/192 (2%)
Query: 10 QVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQ 69
++K+ LLGD G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQ
Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 70 ERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE 129
E + +LAPMYYRG+AAA++VYDIT ++F K WV+EL++ G PN+++ + NK DL +
Sbjct: 65 EAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLID 124
Query: 130 KRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVN---PSRQTGMKLHT 186
R+V + + YA F+ETSAK+A N+NELF EI++R+ + PS G KL
Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADANPPSGGKGFKLRR 184
Query: 187 ESHGGGRRGFCC 198
+ R CC
Sbjct: 185 QPSEPQRS--CC 194
>sp|Q9H0T7|RAB17_HUMAN Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2
Length = 212
Score = 160 bits (404), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 127/194 (65%), Gaps = 9/194 (4%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLVLLG GK+SL LR+VK F T+G AFFT+V+ + ++K +IWDTAGQE+
Sbjct: 21 KLVLLGSGSVGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLEIWDTAGQEK 79
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNP-NLIMFLVANKVDLEEK 130
YHS+ +Y+RGA AA++VYDIT DSF +A++W+++L+ + +P +++ LV NK DL ++
Sbjct: 80 YHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQE 139
Query: 131 RKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHTES-- 188
R+V +EG+ +A L F+ETSAK H V+E+F +A+ L + S + G L ++
Sbjct: 140 REVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL--LQRSDEEGQALRGDAAV 197
Query: 189 ---HGGGRRGFCCS 199
G R+ CC+
Sbjct: 198 ALNKGPARQAKCCA 211
>sp|Q8WQ53|RAB21_GEOCY Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1
Length = 229
Score = 159 bits (403), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 112/174 (64%)
Query: 2 ARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKF 61
+R ++ K+VLLG+ GKTSLVLR+ + +F D E T+ A+F + L++ I+
Sbjct: 8 SRRRQATVKAKVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQL 67
Query: 62 DIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLV 121
IWDTAGQERYH+L P+YYR + A++VYDIT DSF +A+ W++EL+R + + +V
Sbjct: 68 AIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIV 127
Query: 122 ANKVDLEEKRKVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVN 175
NK+DL+ +R V ++ YA+ G TSAK + V ELF ++AKR+ E N
Sbjct: 128 GNKIDLDRQRTVSEKDALEYAESVGAKHYYTSAKQSKGVAELFLDLAKRILEAN 181
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P35292|RAB17_MOUSE Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=1 SV=1
Length = 214
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 126/194 (64%), Gaps = 7/194 (3%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLVLLG GKTSL LR++K F + T+G AFFT+VL L ++K +IWDTAGQE+
Sbjct: 21 KLVLLGSSSVGKTSLALRYMKQDFSNVL-PTVGCAFFTKVLDLGSSSLKLEIWDTAGQEK 79
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNP-NLIMFLVANKVDLEEK 130
Y S+ +Y+RGA AA++VYDIT DSF +A++W+++L+++ P +++ LV NK DL E+
Sbjct: 80 YQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEE 139
Query: 131 RKVKNEEGELYAQENGLSFLETSAKSAHNVNELF----YEIAKRLAEVNPSR-QTGMKLH 185
R+V +EG+ +A+ L F+ETSAK + V+E+F E+ +R + SR Q G +
Sbjct: 140 REVTFQEGKEFAESKSLLFMETSAKLNYQVSEIFNTVAQELLQRAGDTGSSRPQEGEAVA 199
Query: 186 TESHGGGRRGFCCS 199
R+ CC+
Sbjct: 200 LNQEPPIRQRQCCA 213
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 109/162 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + T+G F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 173
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT ++F W+++ ++ NPN+ + L+ NK DL +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGM-KLHTESHG 190
V EEGE +A+E+GL FLETSA++AHNV E F AK E+ Q G+ + ES+G
Sbjct: 128 AVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAK---EIYKKIQDGVFDVSNESYG 184
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 106/160 (66%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT ++F W+++ ++ NPN+ + L+ NK DL +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRL 171
V EEGE +A+E+GL FLETSA++AHNV E F AK +
Sbjct: 128 AVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEI 167
>sp|Q1KME6|RAB6A_CHICK Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3
Length = 208
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 111/161 (68%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
KLV LG+ GKTSL+ RF+ F + ++TIG F ++ + L + TI+ +WDTAGQER
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ SL P Y R +AAAVVVYDIT+++SF++ KW+ +++ + ++I+ LV NK DL +KR
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 134
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLA 172
+V EEGE A+E + F+ETSAK+ +NV +LF +A L
Sbjct: 135 QVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 175
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 108/160 (67%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K +++GD G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+ S+ YYRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARR 127
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRL 171
+VK EEGE +A+E+GL F+ETSAK+A NV E F AK +
Sbjct: 128 EVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEI 167
>sp|Q99260|YPT6_YEAST GTP-binding protein YPT6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT6 PE=1 SV=1
Length = 215
Score = 157 bits (396), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 118/184 (64%), Gaps = 2/184 (1%)
Query: 1 MARTSNKNIQVKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIK 60
M+R+ + K+V LG+ G GKTSL+ RF+ F D ++TIG F ++ + L++ TI+
Sbjct: 1 MSRSGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIR 60
Query: 61 FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQ-GNPNLIMF 119
+WDTAGQER+ SL P Y R + A++VYDIT SFE KW+++++ + G+ N+I+
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILC 120
Query: 120 LVANKVDLEEKRKVKNEEGELYAQENGLS-FLETSAKSAHNVNELFYEIAKRLAEVNPSR 178
+V NK DL ++R++ EEGE A+ G F+ETS K+ +NV LF +IAK L E S
Sbjct: 121 IVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSLPEFQNSE 180
Query: 179 QTGM 182
T +
Sbjct: 181 STPL 184
>sp|Q17R06|RAB21_BOVIN Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1
Length = 222
Score = 157 bits (396), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 113/184 (61%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K+VLLG+ GKTSLVLR+ + +F D +T+ A+F T+ L++ + IWDTAGQER
Sbjct: 18 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 77
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+H+L P+YYR + A++VYDIT DSF++ K WV+EL++ + + +V NKVDLE++R
Sbjct: 78 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKER 137
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHTESHGG 191
V +E E YA+ G TSAK + ELF ++ KR+ E + + G
Sbjct: 138 HVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGA 197
Query: 192 GRRG 195
RRG
Sbjct: 198 ARRG 201
>sp|Q9UL25|RAB21_HUMAN Ras-related protein Rab-21 OS=Homo sapiens GN=RAB21 PE=1 SV=3
Length = 225
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 113/184 (61%)
Query: 12 KLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQER 71
K+VLLG+ GKTSLVLR+ + +F D +T+ A+F T+ L++ + IWDTAGQER
Sbjct: 21 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 80
Query: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKR 131
+H+L P+YYR + A++VYDIT DSF++ K WV+EL++ + + +V NK+DLE++R
Sbjct: 81 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER 140
Query: 132 KVKNEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHTESHGG 191
V +E E YA+ G TSAK + ELF ++ KR+ E + + G
Sbjct: 141 HVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGT 200
Query: 192 GRRG 195
RRG
Sbjct: 201 ARRG 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,828,822
Number of Sequences: 539616
Number of extensions: 2665176
Number of successful extensions: 12670
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 10716
Number of HSP's gapped (non-prelim): 1213
length of query: 199
length of database: 191,569,459
effective HSP length: 112
effective length of query: 87
effective length of database: 131,132,467
effective search space: 11408524629
effective search space used: 11408524629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)