Your job contains 1 sequence.
>029106
MGFDDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEI
YPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRER
DLSSEEIEVEKVISSRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPQKQALAR
QLNLRPRQVEVWFQNRRAR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029106
(199 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 321 2.8e-38 2
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 340 6.9e-31 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 228 1.6e-23 2
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 264 7.8e-23 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 251 1.9e-21 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 251 1.9e-21 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 228 5.1e-19 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 220 3.6e-18 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 206 1.1e-16 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 186 1.4e-14 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 151 1.5e-10 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 141 2.6e-09 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 136 3.7e-09 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 138 6.6e-09 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 127 2.6e-08 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 133 4.8e-08 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 129 5.2e-08 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 132 5.9e-08 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 134 7.3e-08 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 122 8.7e-08 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 133 9.4e-08 1
WB|WBGene00000445 - symbol:ceh-22 species:6239 "Caenorhab... 133 1.5e-07 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 132 1.8e-07 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 131 3.1e-07 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 128 3.3e-07 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 128 5.9e-07 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 127 8.5e-07 1
UNIPROTKB|E1BE99 - symbol:HOXD12 "Uncharacterized protein... 113 3.2e-06 2
UNIPROTKB|J9P7F8 - symbol:NOTO "Uncharacterized protein" ... 107 4.1e-06 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 120 7.0e-06 1
UNIPROTKB|E2R114 - symbol:HOXA11 "Uncharacterized protein... 101 9.1e-06 2
UNIPROTKB|P35452 - symbol:HOXD12 "Homeobox protein Hox-D1... 113 1.0e-05 2
UNIPROTKB|F1RZG4 - symbol:HOXD12 "Uncharacterized protein... 113 1.0e-05 2
ZFIN|ZDB-GENE-010108-2 - symbol:vent "ventral expressed h... 113 1.2e-05 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 103 1.2e-05 1
ZFIN|ZDB-GENE-050217-3 - symbol:nkx2.2b "NK2 transcriptio... 118 1.4e-05 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 102 1.6e-05 1
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein... 101 2.1e-05 1
UNIPROTKB|P24343 - symbol:HOXD12 "Homeobox protein Hox-D1... 111 3.0e-05 2
FB|FBgn0261930 - symbol:vnd "ventral nervous system defec... 108 3.9e-05 2
UNIPROTKB|F6XRF4 - symbol:HOXD12 "Uncharacterized protein... 110 4.4e-05 2
UNIPROTKB|F1NE15 - symbol:LOC100858551 "Uncharacterized p... 98 4.8e-05 1
UNIPROTKB|D6RAR5 - symbol:D6RAR5 "Uncharacterized protein... 98 4.8e-05 1
RGD|1310629 - symbol:Nkx2-8 "NK2 homeobox 8" species:1011... 113 6.0e-05 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 97 6.3e-05 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 97 6.3e-05 1
WB|WBGene00000432 - symbol:ceh-7 species:6239 "Caenorhabd... 97 6.3e-05 1
UNIPROTKB|A5PKI4 - symbol:HOXB3 "HOXB3 protein" species:9... 117 6.4e-05 1
UNIPROTKB|F1LQ30 - symbol:Evx1 "Protein Evx1" species:101... 116 7.9e-05 1
UNIPROTKB|H9L1U3 - symbol:H9L1U3 "Uncharacterized protein... 96 8.2e-05 1
UNIPROTKB|P97273 - symbol:TITF1 "Thyroid transcription fa... 96 8.2e-05 1
MGI|MGI:96204 - symbol:Hoxd12 "homeobox D12" species:1009... 113 8.6e-05 1
RGD|1309797 - symbol:Hoxd12 "homeo box D12" species:10116... 113 9.3e-05 1
UNIPROTKB|F1MZR4 - symbol:LOC516179 "Uncharacterized prot... 104 9.5e-05 1
UNIPROTKB|E1BNP2 - symbol:HOXA11 "Uncharacterized protein... 101 0.00011 2
UNIPROTKB|F1SHT7 - symbol:HOXA11 "Uncharacterized protein... 101 0.00011 2
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 95 0.00011 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 95 0.00011 1
UNIPROTKB|P24340 - symbol:HOXD9 "Homeobox protein Hox-D9"... 95 0.00011 1
MGI|MGI:95461 - symbol:Evx1 "even skipped homeotic gene 1... 115 0.00011 1
UNIPROTKB|E1BAC5 - symbol:NKX2-8 "Uncharacterized protein... 111 0.00012 1
DICTYBASE|DDB_G0291075 - symbol:warA "putative homeobox t... 118 0.00012 1
UNIPROTKB|J9NWF1 - symbol:NKX2-8 "Uncharacterized protein... 111 0.00012 1
UNIPROTKB|Q9YI38 - symbol:GGMOXr1 "Uncharacterized protei... 104 0.00012 2
UNIPROTKB|F1SHK4 - symbol:NKX2-8 "Uncharacterized protein... 111 0.00012 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 97 0.00013 1
UNIPROTKB|Q6F2E2 - symbol:vex1 "Homeobox protein vex1" sp... 108 0.00013 2
UNIPROTKB|F1NF97 - symbol:GBX2 "Homeobox protein GBX-2" s... 107 0.00014 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 94 0.00014 1
ZFIN|ZDB-GENE-030131-4340 - symbol:nkx2.9 "NK2 transcript... 105 0.00015 1
UNIPROTKB|F1SLF3 - symbol:NOTO "Uncharacterized protein" ... 111 0.00015 1
UNIPROTKB|Q5TM83 - symbol:Nanog "Homeobox protein NANOG" ... 112 0.00016 1
MGI|MGI:1919200 - symbol:Nanog "Nanog homeobox" species:1... 112 0.00016 1
UNIPROTKB|F1NHF8 - symbol:CDX4 "Uncharacterized protein" ... 93 0.00018 1
UNIPROTKB|G3MWL7 - symbol:G3MWL7 "Uncharacterized protein... 110 0.00020 1
MGI|MGI:1270158 - symbol:Nkx2-9 "NK2 transcription factor... 109 0.00021 1
RGD|1310780 - symbol:Hoxb3 "homeo box B3" species:10116 "... 97 0.00021 2
UNIPROTKB|F1MJZ3 - symbol:F1MJZ3 "Uncharacterized protein... 110 0.00021 1
MGI|MGI:96184 - symbol:Hoxb3 "homeobox B3" species:10090 ... 97 0.00022 2
UNIPROTKB|E2R6Q3 - symbol:HOXD12 "Uncharacterized protein... 110 0.00023 1
UNIPROTKB|F1SHT6 - symbol:F1SHT6 "Uncharacterized protein... 92 0.00024 1
UNIPROTKB|G3ECA1 - symbol:HoxA10 "Homebox A10" species:98... 92 0.00024 1
UNIPROTKB|E2RFP2 - symbol:MEOX1 "Uncharacterized protein"... 109 0.00025 1
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically... 108 0.00025 1
UNIPROTKB|F1P2W4 - symbol:NKX6-2 "Uncharacterized protein... 101 0.00029 2
MGI|MGI:96086 - symbol:Hhex "hematopoietically expressed ... 109 0.00029 1
UNIPROTKB|F1NXB2 - symbol:HHEX "Hematopoietically-express... 109 0.00031 1
UNIPROTKB|Q05502 - symbol:HHEX "Hematopoietically-express... 109 0.00031 1
UNIPROTKB|F1NC59 - symbol:F1NC59 "Uncharacterized protein... 91 0.00031 1
UNIPROTKB|F1NES3 - symbol:HHEX "Hematopoietically-express... 109 0.00032 1
UNIPROTKB|F1S1H4 - symbol:MEOX1 "Uncharacterized protein"... 108 0.00033 1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ... 108 0.00038 1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ... 108 0.00038 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 108 0.00038 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 108 0.00038 1
RGD|619932 - symbol:Hhex "hematopoietically expressed hom... 108 0.00038 1
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express... 108 0.00039 1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express... 108 0.00039 1
WB|WBGene00003102 - symbol:mab-5 species:6239 "Caenorhabd... 98 0.00040 2
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 90 0.00041 1
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 321 (118.1 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/129 (60%), Positives = 90/129 (69%)
Query: 80 KGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXX---- 135
+ Y+ AG + QI RQ S HS +S SFSSGRV KRER++
Sbjct: 53 ESYKIKTGAGAGD-QIC-RQTSSHSGIS-SFSSGRV-KREREISGGDGEEEAEETTERVV 108
Query: 136 --RASDE--DEDGVNARKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVE 190
R SD+ DE+GV+ARKKLRLTK+QSALLE++FK HSTLNP QKQALARQLNLRPRQVE
Sbjct: 109 CSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVE 168
Query: 191 VWFQNRRAR 199
VWFQNRRAR
Sbjct: 169 VWFQNRRAR 177
Score = 105 (42.0 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 1 MGFDDGCNTGLVLGLGFASAIETTPTNKANNI----NIVNHQQLQLPKGTCFEPSLSLGL 56
MG DD CNTGLVLGLG + TP N + I + V+H+ ++L +PSL+L L
Sbjct: 1 MGLDDSCNTGLVLGLG----LSPTPNNYNHAIKKSSSTVDHRFIRL------DPSLTLSL 50
Query: 57 PGEIY 61
GE Y
Sbjct: 51 SGESY 55
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 88/162 (54%), Positives = 100/162 (61%)
Query: 46 TCFEPSLSLGLPGEIYPEAATATTKKNS-----NSIDVNKGYEESAAAGVAEYQILNRQA 100
TC L LGL P +T +++S S+ + + S Q+ RQ
Sbjct: 6 TC-NTGLVLGLGPSPIPNNYNSTIRQSSVYKLEPSLTLCLSGDPSVTVVTGADQLC-RQT 63
Query: 101 SPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASD--EDEDGVNARKKLRLTKEQS 158
S HS VS SFSSGRVVKRERD SD EDE+G++ARKKLRLTK+QS
Sbjct: 64 SSHSGVS-SFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQS 122
Query: 159 ALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
ALLEESFK HSTLNP QKQ LARQLNLRPRQVEVWFQNRRAR
Sbjct: 123 ALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRAR 164
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 228 (85.3 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 47/64 (73%), Positives = 56/64 (87%)
Query: 138 SDEDEDG-VNARKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQN 195
SDE+EDG +RKKLRL+K+QSA LEE+FK+H+TLNP QK ALA++LNL RQVEVWFQN
Sbjct: 118 SDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQN 177
Query: 196 RRAR 199
RRAR
Sbjct: 178 RRAR 181
Score = 57 (25.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 26/97 (26%), Positives = 39/97 (40%)
Query: 1 MGFDDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSL------ 54
MG +D GL L LGF+ N N ++ N+ Q +LP F+P+ L
Sbjct: 3 MGKED---LGLSLSLGFSQNHNPLQMNLNPNSSLSNNLQ-RLPWNQTFDPTSDLRKIDVN 58
Query: 55 GLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVA 91
P + E T + NS G + S G++
Sbjct: 59 SFPSTVNCEEDTGVSSPNSTISSTISG-KRSEREGIS 94
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 64/122 (52%), Positives = 81/122 (66%)
Query: 80 KGYEESAAAGVAEYQILNRQ-ASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRAS 138
+G + + AEY + +SP+S VS+S +G+ +RE D R
Sbjct: 69 RGIDVNRPPSTAEYGDEDAGVSSPNSTVSSS--TGKRSEREED--------TDPQGSRGI 118
Query: 139 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRR 197
+DEDG N+RKKLRL+K+QSA+LEE+FK HSTLNP QKQALA+QL LR RQVEVWFQNRR
Sbjct: 119 SDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRR 178
Query: 198 AR 199
AR
Sbjct: 179 AR 180
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 65/142 (45%), Positives = 86/142 (60%)
Query: 68 TTKKNSNSIDVNKGYEESAA-AGVAEYQILNRQA---SPHSAVSNSFSSGR--VVKRERD 121
T ++NS++ +G+ + A + VA + A SP+SAVS+ + R V R D
Sbjct: 73 TAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGD 132
Query: 122 LXXXXXXXXXXXXXRASDEDEDGVN---ARKKLRLTKEQSALLEESFKQHSTLNP-QKQA 177
+DEDG N +RKKLRL+K+Q+ +LEE+FK+HSTLNP QK A
Sbjct: 133 ENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLA 192
Query: 178 LARQLNLRPRQVEVWFQNRRAR 199
LA+QLNLR RQVEVWFQNRRAR
Sbjct: 193 LAKQLNLRARQVEVWFQNRRAR 214
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 60/115 (52%), Positives = 72/115 (62%)
Query: 92 EYQILNRQASPHSAVSNSFSSGRVVK----RERDLXXXXXXXXXXXXXRASDEDEDGVNA 147
E + + SP +V++SF +K R RAS+ED D N
Sbjct: 127 EEAVPSMSVSPPDSVTSSFQLDFGIKSYGYERRSNKRDIDDEVERSASRASNEDNDDENG 186
Query: 148 --RKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
RKKLRL+K+QSA LE+SFK+HSTLNP QK ALA+QLNLRPRQVEVWFQNRRAR
Sbjct: 187 STRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRAR 241
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 76/213 (35%), Positives = 105/213 (49%)
Query: 4 DDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQ-LPKGTCFEPSLSLGLPGEIYP 62
DDG L L LGF ++ N + + +Q + + P ++
Sbjct: 5 DDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWINMFQ 64
Query: 63 EAATATTKKNS-NSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERD 121
+ + ++ IDVN+ + V + +SP+S VS S SG+ +RE
Sbjct: 65 SSERNSDMRSFLRGIDVNRA-PSTVVVDVEDEGA--GVSSPNSTVS-SVMSGKKSERELM 120
Query: 122 LXXXXXXXXXXXXX---RAS------DEDEDGV-----NARKKLRLTKEQSALLEESFKQ 167
RAS +DEDG ++RKKLRL+KEQ+ +LEE+FK+
Sbjct: 121 AAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKE 180
Query: 168 HSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
HSTLNP QK ALA+QLNLR RQVEVWFQNRRAR
Sbjct: 181 HSTLNPKQKMALAKQLNLRTRQVEVWFQNRRAR 213
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 54/109 (49%), Positives = 71/109 (65%)
Query: 100 ASPHSAVSNSFSSGR-VVKRERDLXXXXXXXXXXXXXRAS-----DEDED--GVNARKKL 151
+SP+S +S++ S R +RE R+S DE+ED G RKKL
Sbjct: 78 SSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKL 137
Query: 152 RLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
RL+K+QSA+LE++FK+H+TLNP QK ALA++L L RQVEVWFQNRRAR
Sbjct: 138 RLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRAR 186
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
D+ RKKLRLT+EQS LLE+SF+Q+ TLNP QK+ LA+ L LRPRQ+EVWFQNRRAR
Sbjct: 131 DDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRAR 190
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 42/62 (67%), Positives = 45/62 (72%)
Query: 139 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRR 197
D+ G RKKLRLTKEQS LLEESF Q+ TL P QK+ LA L L RQVEVWFQNRR
Sbjct: 59 DDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRR 118
Query: 198 AR 199
AR
Sbjct: 119 AR 120
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 151 (58.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 139 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRR 197
D+ D KK RLT EQ LLE+SF+ + L P+++ LA++L L+PRQV VWFQNRR
Sbjct: 58 DDFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRR 117
Query: 198 AR 199
AR
Sbjct: 118 AR 119
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 141 (54.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 139 DEDEDGVN-ARKKLRLTKEQSALLEESFKQHSTLNPQ-KQALARQLNLRPRQVEVWFQNR 196
D +DG KK RL EQ LE++F+ + L P+ K LAR L L+PRQ+ +WFQNR
Sbjct: 74 DYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNR 133
Query: 197 RAR 199
RAR
Sbjct: 134 RAR 136
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 136 (52.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 76 IDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSG---RVVKRERDLXXXXXXXXXX 132
+D + ++ G Y + + H + N G + VKR R
Sbjct: 1 MDHGRLMDDQMMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRK-----RRSKGS 55
Query: 133 XXXRASDEDEDGVNARKKLRLTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEV 191
D E G RK+ +LT EQ +LE SF +H + +K+ +A +L L PRQV V
Sbjct: 56 SATNEEDVAEIGGMLRKR-KLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAV 114
Query: 192 WFQNRRAR 199
WFQNRRAR
Sbjct: 115 WFQNRRAR 122
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 138 (53.6 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 138 SDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPQ-KQALARQLNLRPRQVEVWFQNR 196
SD+ + KK RL EQ LE+SF+ + L P+ K LA+ L L+PRQ+ +WFQNR
Sbjct: 104 SDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNR 163
Query: 197 RAR 199
RAR
Sbjct: 164 RAR 166
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNPQ-KQALARQLNLRPRQVEVWFQNRRAR 199
++R T EQ+ LE F H L+PQ ++ LA+ L+L RQV+ WFQNRRA+
Sbjct: 80 QIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAK 130
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 133 (51.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
KK RLT Q A LE SF++ L+ ++ L+R+L L+PRQ+ VWFQNRRAR
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRAR 128
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 129 (50.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 140 EDEDGVNA--RKKLRLTKEQSALLEESFKQHSTLNP---------QKQALARQLNLRPRQ 188
E+ + N +KK ++T EQ LE SF++ LNP +K L+++L L+PRQ
Sbjct: 60 EESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQ 119
Query: 189 VEVWFQNRRAR 199
+ VWFQNR+AR
Sbjct: 120 IAVWFQNRKAR 130
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 132 (51.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 32/66 (48%), Positives = 40/66 (60%)
Query: 136 RASDEDEDGVNAR-KKLRLTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEVWF 193
+ S DG N +K +LT EQ +LE SF +H + +K LA +L L PRQV VWF
Sbjct: 41 KGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWF 100
Query: 194 QNRRAR 199
QNRRAR
Sbjct: 101 QNRRAR 106
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 134 (52.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 147 ARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
A KK RL EQ LE++F+ + L P+++ LA++L L+PRQV +WFQNRRAR
Sbjct: 70 AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRAR 123
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 140 EDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPQ-KQALARQLNLRPRQVEVWFQNRRA 198
E+ KK RLT++Q LE+ F + L P K L+ QL L RQV VWFQN+RA
Sbjct: 2 ENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRA 61
Query: 199 R 199
R
Sbjct: 62 R 62
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 133 (51.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 138 SDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNR 196
SD+ + KK RL EQ LE+SF+ + L P+++ LA+ L ++PRQ+ +WFQNR
Sbjct: 76 SDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNR 135
Query: 197 RAR 199
RAR
Sbjct: 136 RAR 138
>WB|WBGene00000445 [details] [associations]
symbol:ceh-22 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0043282 "pharyngeal muscle
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0006898 GO:GO:0040010 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:Z73974 GO:GO:0043282
EMBL:U10080 EMBL:U10081 PIR:T21552 RefSeq:NP_001076742.1
UniGene:Cel.19760 ProteinModelPortal:P41936 SMR:P41936
STRING:P41936 PaxDb:P41936 GeneID:179485 KEGG:cel:CELE_F29F11.5
UCSC:F29F11.5a CTD:179485 WormBase:F29F11.5a eggNOG:NOG310976
HOGENOM:HOG000217930 InParanoid:P41936 NextBio:905598
ArrayExpress:P41936 Uniprot:P41936
Length = 346
Score = 133 (51.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 138 SDEDEDGVNARKKLR----LTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVW 192
+DE++DG RKK + TK Q+ LE F+ L+ P+++ALA Q+ L P QV++W
Sbjct: 177 NDEEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIW 236
Query: 193 FQNRR 197
FQN R
Sbjct: 237 FQNHR 241
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 132 (51.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 147 ARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+ KK RL +Q LE++F+ + L P+++ LA++L L+PRQV VWFQNRRAR
Sbjct: 57 SEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRAR 110
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 131 (51.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 147 ARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+ KK RL+ Q LE++F+ + L P+++ LA++L L+PRQV VWFQNRRAR
Sbjct: 60 SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 113
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 128 (50.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 137 ASDEDEDGVNARKKLRLTKEQSALLEESFKQ-HSTLNPQKQALARQLNLRPRQVEVWFQN 195
A + + +G +K +L+ EQ +LE SF+ H + +K LA +L L PRQV VWFQN
Sbjct: 49 AEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQN 108
Query: 196 RRAR 199
RRAR
Sbjct: 109 RRAR 112
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 128 (50.1 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 139 DED--EDGVN-ARKKLRLTKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQ 194
DE+ +DG KK RL EQ LE+ F+ + L + +K LAR L L+PRQ+ +WFQ
Sbjct: 58 DEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQ 117
Query: 195 NRRAR 199
NRRAR
Sbjct: 118 NRRAR 122
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 127 (49.8 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 146 NARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
N + R + EQ LE F+ + L P+K+ LAR+L L+PRQV +WFQN+RAR
Sbjct: 29 NKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83
>UNIPROTKB|E1BE99 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 OMA:PDGLPWG EMBL:DAAA02004174
IPI:IPI00692097 Ensembl:ENSBTAT00000005652 Uniprot:E1BE99
Length = 271
Score = 113 (44.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 147 ARKKLR-LTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
ARKK + TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 203 ARKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 257
Score = 44 (20.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 16 GFASAIETTPTN---KANNINIVN-HQQLQLPKGTCFEPSLSLGLPGEIYPEAATATTK 70
G ++ +E TP + K + +N + +Q +C PSL GLP P A K
Sbjct: 150 GSSTLLEGTPCSAGFKDDAKGPLNLNMTMQAGVASCLRPSLPDGLPWGAAPGRARKKRK 208
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 107 (42.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 137 ASDEDEDGVNARKKLR--LTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEVWF 193
A++E +D +K++R +Q LE F KQH+ + ++ LA +LNL QV +WF
Sbjct: 18 AAEELQDTERPQKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWF 77
Query: 194 QNRRAR 199
QNRR +
Sbjct: 78 QNRRVK 83
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 120 (47.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 152 RLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
R ++EQ LE F+ + L P+K+ +AR+L L+PRQV +WFQN+RAR
Sbjct: 33 RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRAR 81
>UNIPROTKB|E2R114 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:3207 KO:K09296 OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:AAEX03009390
RefSeq:XP_003431971.2 Ensembl:ENSCAFT00000004754 GeneID:100683897
KEGG:cfa:100683897 Uniprot:E2R114
Length = 327
Score = 101 (40.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 144 GVNARKK-LRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
G RKK TK Q LE F +N +K+ L+R LNL RQV++WFQNRR +
Sbjct: 252 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMK 309
Score = 59 (25.8 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 64 AATAT-TKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSG 113
AAT T T S+S G E+AAA AE + R+ P S+ S SSG
Sbjct: 193 AATGTGTPATSSSDGGGGGCREAAAAAAAEEK--ERRRRPESSSSPESSSG 241
>UNIPROTKB|P35452 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 EMBL:CH471058 GO:GO:0007389
GO:GO:0042733 GO:GO:0000228 EMBL:AC009336 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:AF154915 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG IPI:IPI00784701
PIR:C39065 RefSeq:NP_067016.3 UniGene:Hs.450028
ProteinModelPortal:P35452 SMR:P35452 STRING:P35452
PhosphoSite:P35452 DMDM:259016345 PRIDE:P35452
Ensembl:ENST00000406506 GeneID:3238 KEGG:hsa:3238 UCSC:uc010zev.1
GeneCards:GC02P176930 H-InvDB:HIX0029976 HGNC:HGNC:5135 MIM:142988
neXtProt:NX_P35452 PharmGKB:PA29409 InParanoid:P35452
GenomeRNAi:3238 NextBio:12887 ArrayExpress:P35452 CleanEx:HS_HOXD12
Genevestigator:P35452 GermOnline:ENSG00000170178 Uniprot:P35452
Length = 270
Score = 113 (44.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 147 ARKKLR-LTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
ARKK + TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 202 ARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 256
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 46 TCFEPSLSLGLPGEIYPEAATATTK 70
+C PSL GLP P A K
Sbjct: 183 SCLRPSLPDGLPWGAAPGRARKKRK 207
>UNIPROTKB|F1RZG4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0001501 GO:GO:0007389 GO:GO:0042733
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
EMBL:CU570829 RefSeq:XP_003483729.1 UniGene:Ssc.74532
Ensembl:ENSSSCT00000017401 GeneID:100158034 KEGG:ssc:100158034
Uniprot:F1RZG4
Length = 270
Score = 113 (44.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 147 ARKKLR-LTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
ARKK + TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 202 ARKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 256
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 46 TCFEPSLSLGLPGEIYPEAATATTK 70
+C PSL GLP P A K
Sbjct: 183 SCLRPSLPDGLPWGAAPGRARKKRK 207
>ZFIN|ZDB-GENE-010108-2 [details] [associations]
symbol:vent "ventral expressed homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010108-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009953 HSSP:P06602 GO:GO:0042661 eggNOG:NOG150160
GeneTree:ENSGT00610000086217 OrthoDB:EOG44TP97 EMBL:CABZ01072677
EMBL:AF255044 EMBL:AF277077 IPI:IPI00511939 RefSeq:NP_571775.1
UniGene:Dr.106743 STRING:Q9DGM9 Ensembl:ENSDART00000017456
GeneID:64810 KEGG:dre:64810 CTD:64810 HOGENOM:HOG000206355
InParanoid:Q9DGM9 OMA:RRMRTKF NextBio:20901999 Uniprot:Q9DGM9
Length = 170
Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 140 EDEDGVNARKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRA 198
E E G N R + + T +Q + LE+SF +H L Q++ +A +L+L QV+ WFQNRR
Sbjct: 58 EVEAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKLHLSETQVKTWFQNRRM 117
Query: 199 R 199
+
Sbjct: 118 K 118
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 103 (41.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 142 EDGVNARK-KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
E ARK + TKEQ LE F H+ L ++ +A L+L RQV+VWFQNRR +
Sbjct: 51 EGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 110
>ZFIN|ZDB-GENE-050217-3 [details] [associations]
symbol:nkx2.2b "NK2 transcription factor related 2b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI] [GO:0021508 "floor plate formation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-050217-3 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021508 GO:GO:0021514 HOVERGEN:HBG006689
EMBL:AY729018 IPI:IPI00481458 UniGene:Dr.78851
ProteinModelPortal:Q5XX14 SMR:Q5XX14 STRING:Q5XX14
InParanoid:Q5XX14 ArrayExpress:Q5XX14 Uniprot:Q5XX14
Length = 237
Score = 118 (46.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 136 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQ 194
R S ED G ++++ +K Q+ LE F+Q L+ P+++ LA+ L+L P QV++WFQ
Sbjct: 86 RESSEDS-GKKRKRRILFSKTQTFELERRFRQQRYLSAPEREHLAKLLHLTPTQVKIWFQ 144
Query: 195 NRR 197
N R
Sbjct: 145 NHR 147
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 102 (41.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q LE F + +N +K+ L+R LNL RQV++WFQNRR +
Sbjct: 39 KKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMK 91
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 101 (40.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQNRRAR 199
D+DG + + +Q LE++F+Q L P++ LA L + QV+VWFQNRR +
Sbjct: 18 DKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 77
>UNIPROTKB|P24343 [details] [associations]
symbol:HOXD12 "Homeobox protein Hox-D12" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GeneTree:ENSGT00700000104263 HOGENOM:HOG000231177
HOVERGEN:HBG052050 KO:K09297 EMBL:X62019 EMBL:D10289
IPI:IPI00598647 PIR:A45186 PIR:C37914 PIR:S14800 RefSeq:NP_990580.1
UniGene:Gga.695 ProteinModelPortal:P24343 IntAct:P24343
STRING:P24343 Ensembl:ENSGALT00000015086 GeneID:396178
KEGG:gga:396178 CTD:3238 eggNOG:NOG241833 InParanoid:P24343
OMA:PDGLPWG OrthoDB:EOG43N7DG NextBio:20816232 Uniprot:P24343
Length = 266
Score = 111 (44.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
G + +K+ TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 196 GRSRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 252
Score = 37 (18.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 16 GFASAIETTPTNKANNINIVNHQQLQL---PKG--TCFEPSLSLGLP 57
G A+ E + +I N L L P +C PS+ GLP
Sbjct: 144 GSAALFEVNSCTSSLKEDIKNSVNLNLTVQPAAVQSCLRPSVQDGLP 190
>FB|FBgn0261930 [details] [associations]
symbol:vnd "ventral nervous system defective" species:7227
"Drosophila melanogaster" [GO:0007400 "neuroblast fate
determination" evidence=IMP;TAS] [GO:0005634 "nucleus"
evidence=ISS;IDA;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0007419 "ventral cord development"
evidence=NAS;TAS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IMP;TAS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007389
"pattern specification process" evidence=NAS] [GO:0007417 "central
nervous system development" evidence=NAS] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0021782 "glial cell
development" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007420 EMBL:AE014298
GO:GO:0043565 GO:GO:0007419 GO:GO:0045944 EMBL:AL031883
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014019 GO:GO:0007400
GO:GO:0000122 GO:GO:0000981 GO:GO:0009953 GO:GO:0007398
GO:GO:0021782 eggNOG:NOG310976 GeneTree:ENSGT00700000104098
KO:K08029 EMBL:X87141 EMBL:S78691 EMBL:M27290 PIR:S57246
RefSeq:NP_476786.2 UniGene:Dm.4713 PDB:1NK2 PDB:1NK3 PDB:1QRY
PDB:1VND PDBsum:1NK2 PDBsum:1NK3 PDBsum:1QRY PDBsum:1VND
ProteinModelPortal:P22808 SMR:P22808 IntAct:P22808 MINT:MINT-283656
STRING:P22808 EnsemblMetazoa:FBtr0070110 GeneID:31003
KEGG:dme:Dmel_CG6172 CTD:31003 FlyBase:FBgn0261930
InParanoid:P22808 OMA:PILLPPW PhylomeDB:P22808
EvolutionaryTrace:P22808 GenomeRNAi:31003 NextBio:771420
Bgee:P22808 GermOnline:CG6172 Uniprot:P22808
Length = 723
Score = 108 (43.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 143 DGV-NARKKLRL--TKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
DG+ N ++K R+ TK Q+ LE F+Q L+ P+++ LA + L P QV++WFQN R
Sbjct: 539 DGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHR 597
Score = 53 (23.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 17 FASAIETTPTNKANNINIVNHQQLQLPKGTC-FE--PSL----SLGLPGEIYPEAATA 67
F++A T PTN +++ + +QL++P G F P L SL LP AA A
Sbjct: 96 FSTASTTVPTNTSSSSGLAP-EQLRIPTGAAAFSGFPGLHSMSSLMLPSSAAVAAAAA 152
>UNIPROTKB|F6XRF4 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 KO:K09297 CTD:3238 OMA:PDGLPWG
Ensembl:ENSCAFT00000021306 EMBL:AAEX03017786 RefSeq:XP_545535.1
GeneID:488413 KEGG:cfa:488413 Uniprot:F6XRF4
Length = 270
Score = 110 (43.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
G +K+ TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 200 GRTRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 256
Score = 37 (18.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 46 TCFEPSLSLGLP 57
+C PSL GLP
Sbjct: 183 SCLRPSLPDGLP 194
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 98 (39.6 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQ-ALARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L ++ +AR LNL RQV++WFQNRR +
Sbjct: 3 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMK 55
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 98 (39.6 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQ-ALARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L ++ +AR LNL RQV++WFQNRR +
Sbjct: 48 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMK 100
>RGD|1310629 [details] [associations]
symbol:Nkx2-8 "NK2 homeobox 8" species:10116 "Rattus norvegicus"
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030323
"respiratory tube development" evidence=ISO] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1310629 GO:GO:0005634
GO:GO:0030324 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366
GO:GO:0003690 GO:GO:0007409 GO:GO:0050680 EMBL:CH473947
GeneTree:ENSGT00700000104098 CTD:26257 KO:K09347 OMA:ERSHYPS
OrthoDB:EOG466VN6 IPI:IPI00367165 RefSeq:NP_001100202.1
UniGene:Rn.218683 Ensembl:ENSRNOT00000011562 GeneID:299061
KEGG:rno:299061 UCSC:RGD:1310629 NextBio:644726 Uniprot:D4A7B5
Length = 234
Score = 113 (44.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 136 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQ 194
RAS + ++++ +K Q+ LE F+Q L+ P+++ LAR L L P QV++WFQ
Sbjct: 71 RASPGSDAEKRRKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQ 130
Query: 195 NRR 197
N R
Sbjct: 131 NHR 133
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 97 (39.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQK-QALARQLNLRPRQVEVWFQNRRAR 199
R + T EQ L+ F+ + + Q+ Q+LA++L+L Q+++WFQN+RA+
Sbjct: 5 RPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAK 57
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 97 (39.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 144 GVNARKKLRLTKEQSALLEESF--KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
G + R++ T EQ LE+ F K++ +L + Q +A L L QV++WFQNRRA+
Sbjct: 22 GKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQ-IAHALKLSEVQVKIWFQNRRAK 78
>WB|WBGene00000432 [details] [associations]
symbol:ceh-7 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099870
EMBL:AF091459 EMBL:Z66494 PIR:S05708 PIR:T43646 RefSeq:NP_495848.1
UniGene:Cel.9303 ProteinModelPortal:P20270 SMR:P20270
EnsemblMetazoa:C34C6.8 GeneID:174391 KEGG:cel:CELE_C34C6.8
UCSC:C34C6.8 CTD:174391 WormBase:C34C6.8 eggNOG:NOG298372
HOGENOM:HOG000294138 InParanoid:P20270 OMA:RRIRMRR NextBio:883830
Uniprot:P20270
Length = 84
Score = 97 (39.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRRAR 199
R++ T EQ LLE F Q + +++ LAR L+L QV++WFQNRR R
Sbjct: 25 RRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNRRIR 77
>UNIPROTKB|A5PKI4 [details] [associations]
symbol:HOXB3 "HOXB3 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0050767
"regulation of neurogenesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0021546 "rhombomere
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:DAAA02049067
EMBL:BC142499 IPI:IPI00706525 RefSeq:NP_001092644.1
UniGene:Bt.27955 SMR:A5PKI4 Ensembl:ENSBTAT00000028563
GeneID:618214 KEGG:bta:618214 InParanoid:A5PKI4 NextBio:20901061
Uniprot:A5PKI4
Length = 426
Score = 117 (46.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 50/180 (27%), Positives = 72/180 (40%)
Query: 33 NIVNHQQLQLPKGTCFEPSLSL----GLPGEIYPEAA-TATTKKNSNSIDVNKGYEESAA 87
N H + + G+C P L+ PG P AA T+TT +SN +K
Sbjct: 59 NAAPHAKGKELNGSCMRPGLASEPLPAPPGSPPPSAAPTSTTSNSSNGGGPSKSGPPKCG 118
Query: 88 AG---VAEYQILN--RQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDE 142
AG QI +++ S + NS S G D+
Sbjct: 119 AGSNSTLTKQIFPWMKESRQTSKLKNS-SPGTAEGCGSGGGGGGGSGSSGGGGGGGDKSP 177
Query: 143 DGVNARKKLRL--TKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQNRRAR 199
G A K+ R T Q LE+ F + L P++ +A LNL RQ+++WFQNRR +
Sbjct: 178 PGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMK 237
>UNIPROTKB|F1LQ30 [details] [associations]
symbol:Evx1 "Protein Evx1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1565788 GO:GO:0005634 GO:GO:0009792 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00690000102189
KO:K09320 CTD:2128 OMA:LACHSGP GO:GO:0021913 EMBL:AC122669
IPI:IPI00196850 RefSeq:NP_001178901.1 RefSeq:XP_003752234.1
UniGene:Rn.145628 Ensembl:ENSRNOT00000010605 GeneID:100911889
GeneID:500130 KEGG:rno:100911889 KEGG:rno:500130 NextBio:705195
Uniprot:F1LQ30
Length = 407
Score = 116 (45.9 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 46/155 (29%), Positives = 68/155 (43%)
Query: 54 LGLPGEIYPEAATATTKKNSNSIDVNKG-YEE-------SAAAGVAEYQILNRQASPHSA 105
LG PG P A + + + +S D YEE A G AEYQ + +A A
Sbjct: 92 LG-PGPPVPSADSLSGQGQPSSSDTESDFYEEIEVSCTPDCATGNAEYQ--HSKAPDSDA 148
Query: 106 VSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESF 165
+ +S +SG + ASD+ R + T+EQ A LE+ F
Sbjct: 149 LGSSPNSGSEAPKSNG-GSGGSGSQGTLACSASDQMR-----RYRTAFTREQIARLEKEF 202
Query: 166 -KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
+++ P++ LA LNL ++VWFQNRR +
Sbjct: 203 YRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK 237
>UNIPROTKB|H9L1U3 [details] [associations]
symbol:H9L1U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00610000086217 EMBL:AADN02076603
Ensembl:ENSGALT00000035653 OMA:FREQRYI Uniprot:H9L1U3
Length = 119
Score = 96 (38.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 140 EDEDGVNARKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRA 198
E E G AR + + + Q LE SF++ + +K+ LA L+L Q++ WFQNRR
Sbjct: 50 EAEAGGGARPRTKFSAVQLQELERSFREQRYIGASEKRRLAAALDLSQSQIKTWFQNRRM 109
Query: 199 R 199
+
Sbjct: 110 K 110
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 96 (38.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 149 KKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
+++ ++ Q LE FKQ L+ P+++ LA ++L P QV++WFQN R
Sbjct: 4 RRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHR 53
>MGI|MGI:96204 [details] [associations]
symbol:Hoxd12 "homeobox D12" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96204 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH466519 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001501
GO:GO:0007389 GO:GO:0042733 GeneTree:ENSGT00700000104263
HOGENOM:HOG000231177 HOVERGEN:HBG052050 KO:K09297 CTD:3238
eggNOG:NOG241833 OMA:PDGLPWG OrthoDB:EOG43N7DG EMBL:X58849
EMBL:AK031206 EMBL:AL928644 EMBL:BC145656 IPI:IPI00136959
PIR:S16317 RefSeq:NP_032300.2 UniGene:Mm.57124
ProteinModelPortal:P23812 SMR:P23812 IntAct:P23812 STRING:P23812
PhosphoSite:P23812 PRIDE:P23812 Ensembl:ENSMUST00000001878
GeneID:15432 KEGG:mmu:15432 UCSC:uc008kdv.1 InParanoid:Q8BSN0
NextBio:288198 Bgee:P23812 CleanEx:MM_HOXD12 Genevestigator:P23812
GermOnline:ENSMUSG00000001823 Uniprot:P23812
Length = 268
Score = 113 (44.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 147 ARKKLR-LTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
ARKK + TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 200 ARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 254
>RGD|1309797 [details] [associations]
symbol:Hoxd12 "homeo box D12" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1309797 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001501 GO:GO:0007389 GO:GO:0042733 OMA:PDGLPWG
OrthoDB:EOG43N7DG IPI:IPI00368581 Ensembl:ENSRNOT00000002154
Uniprot:D4ACD1
Length = 278
Score = 113 (44.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 147 ARKKLR-LTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
ARKK + TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 210 ARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 264
>UNIPROTKB|F1MZR4 [details] [associations]
symbol:LOC516179 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0045687 "positive regulation of glial cell differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0022010 "central nervous system
myelination" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0010455
"positive regulation of cell fate commitment" evidence=IEA]
[GO:0010454 "negative regulation of cell fate commitment"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0050885 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0022010 GO:GO:0031018 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 GO:GO:0021912
EMBL:DAAA02046415 IPI:IPI00838790 Ensembl:ENSBTAT00000045009
OMA:WDDEKIT Uniprot:F1MZR4
Length = 151
Score = 104 (41.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQNRRAR 199
D+DG + + +Q+ LE++F+Q L P++ LA L + QV+VWFQNRR +
Sbjct: 19 DKDGKKKHSRPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 78
>UNIPROTKB|E1BNP2 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0048589 "developmental growth"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0010720 "positive regulation of
cell development" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=ISS] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0030326 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:DAAA02010937 IPI:IPI00715888
Ensembl:ENSBTAT00000019611 Uniprot:E1BNP2
Length = 315
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 144 GVNARKK-LRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
G RKK TK Q LE F +N +K+ L+R LNL RQV++WFQNRR +
Sbjct: 240 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMK 297
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 64 AATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSG 113
AA AT ++S D G AAA E + R+ P S+ S SSG
Sbjct: 183 AAAATGTPATSSSDSGAGGCREAAAAAEEKE---RRRRPESSSSPESSSG 229
>UNIPROTKB|F1SHT7 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042733 "embryonic
digit morphogenesis" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0010720 "positive
regulation of cell development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
EMBL:CU570959 EMBL:CU480612 Ensembl:ENSSSCT00000018179
Uniprot:F1SHT7
Length = 316
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 144 GVNARKK-LRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
G RKK TK Q LE F +N +K+ L+R LNL RQV++WFQNRR +
Sbjct: 241 GQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMK 298
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 64 AATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSG 113
AA AT ++S D G AAA E + R+ P S+ S SSG
Sbjct: 184 AAAATGTPATSSSDSGAGGCREAAAAAEEKE---RRRRPESSSSPESSSG 230
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 95 (38.5 bits), Expect = 0.00011, P = 0.00011
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L +++ +++ +NL RQV++WFQNRR +
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMK 75
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 95 (38.5 bits), Expect = 0.00011, P = 0.00011
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L +++ +++ +NL RQV++WFQNRR +
Sbjct: 27 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMK 79
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 95 (38.5 bits), Expect = 0.00011, P = 0.00011
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQ-ALARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L ++ +AR LNL RQV++WFQNRR +
Sbjct: 3 KKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMK 55
>MGI|MGI:95461 [details] [associations]
symbol:Evx1 "even skipped homeotic gene 1 homolog"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:95461 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG298527
GeneTree:ENSGT00690000102189 KO:K09320 CTD:2128
HOGENOM:HOG000231897 HOVERGEN:HBG005620 OMA:LACHSGP GO:GO:0021913
EMBL:X54239 IPI:IPI00134754 RefSeq:NP_031992.1 UniGene:Mm.389754
ProteinModelPortal:P23683 SMR:P23683 STRING:P23683 PRIDE:P23683
Ensembl:ENSMUST00000031787 GeneID:14028 KEGG:mmu:14028
UCSC:uc009byv.1 InParanoid:P23683 NextBio:284956 Bgee:P23683
CleanEx:MM_EVX1 Genevestigator:P23683 GermOnline:ENSMUSG00000005503
Uniprot:P23683
Length = 416
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 46/155 (29%), Positives = 68/155 (43%)
Query: 54 LGLPGEIYPEAATATTKKNSNSIDVNKG-YEE-------SAAAGVAEYQILNRQASPHSA 105
LG PG P A + + + +S D YEE A G AEYQ + +A A
Sbjct: 92 LG-PGPPVPSADSLSGQGQPSSSDTESDFYEEIEVSCTPDCATGNAEYQ--HSKAPGSDA 148
Query: 106 VSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESF 165
+ +S +SG + ASD+ R + T+EQ A LE+ F
Sbjct: 149 LGSSPTSGSEAPKSNG-GSGGSGSQGTLACSASDQMR-----RYRTAFTREQIARLEKEF 202
Query: 166 -KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
+++ P++ LA LNL ++VWFQNRR +
Sbjct: 203 YRENYVSRPRRCELAAALNLPETTIKVWFQNRRMK 237
>UNIPROTKB|E1BAC5 [details] [associations]
symbol:NKX2-8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030324 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0003690 GO:GO:0007409
GO:GO:0050680 GeneTree:ENSGT00700000104098 CTD:26257 KO:K09347
OMA:ERSHYPS EMBL:DAAA02052755 IPI:IPI00704604 RefSeq:NP_001179092.1
UniGene:Bt.74366 Ensembl:ENSBTAT00000017757 GeneID:539075
KEGG:bta:539075 NextBio:20877764 Uniprot:E1BAC5
Length = 237
Score = 111 (44.1 bits), Expect = 0.00012, P = 0.00012
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 148 RKKLRL--TKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
RKK R+ +K Q+ LE F+Q L+ P+++ LAR L L P QV++WFQN R
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHR 136
>DICTYBASE|DDB_G0291075 [details] [associations]
symbol:warA "putative homeobox transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0045595 "regulation of
cell differentiation" evidence=IMP] [GO:0009653 "anatomical
structure morphogenesis" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002110 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00023 Pfam:PF00046
PRINTS:PR01415 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS50088
SMART:SM00248 SMART:SM00389 dictyBase:DDB_G0291075 GO:GO:0007275
GO:GO:0005634 GO:GO:0045595 eggNOG:COG0666 GO:GO:0043565
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003700 GO:GO:0006351
GenomeReviews:CM000154_GR Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009653 HSSP:P09959 EMBL:AAFI02000175 EMBL:AF036170
RefSeq:XP_635408.1 ProteinModelPortal:Q54F46
EnsemblProtists:DDB0191441 GeneID:8627992 KEGG:ddi:DDB_G0291075
ProtClustDB:CLSZ2846613 Uniprot:Q54F46
Length = 803
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFK--QHSTLNPQKQALARQLNLRPRQVEVWFQNRRA 198
D+D + +K+ R + +Q LLE+ F QH LN + Q LA +L++ R V++WFQNRRA
Sbjct: 157 DQDDPSKKKRKRTSPDQLKLLEKIFMAHQHPNLNLRSQ-LAVELHMTARSVQIWFQNRRA 215
Query: 199 R 199
+
Sbjct: 216 K 216
>UNIPROTKB|J9NWF1 [details] [associations]
symbol:NKX2-8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104098 CTD:26257 KO:K09347 OMA:ERSHYPS
EMBL:AAEX03005678 RefSeq:XP_852202.1 Ensembl:ENSCAFT00000047066
GeneID:609776 KEGG:cfa:609776 Uniprot:J9NWF1
Length = 239
Score = 111 (44.1 bits), Expect = 0.00012, P = 0.00012
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 148 RKKLRL--TKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
RKK R+ +K Q+ LE F+Q L+ P+++ LAR L L P QV++WFQN R
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHR 136
>UNIPROTKB|Q9YI38 [details] [associations]
symbol:GGMOXr1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:AADN02070145 EMBL:AF043432 IPI:IPI00581083
RefSeq:NP_990096.1 UniGene:Gga.288 SMR:Q9YI38
Ensembl:ENSGALT00000001806 GeneID:395533 KEGG:gga:395533
InParanoid:Q9YI38 NextBio:20815610 Uniprot:Q9YI38
Length = 240
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 137 ASDEDEDGVNARK-KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQ 194
+S + E +RK + TKEQ LE F H+ L ++ +A L+L RQV+VWFQ
Sbjct: 147 SSSKAEGSSRSRKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQ 206
Query: 195 NRRAR 199
NRR +
Sbjct: 207 NRRMK 211
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/75 (24%), Positives = 24/75 (32%)
Query: 38 QQLQLPKGTCFEPSLSLGLPGEIYPE-AATATTKKNSNSIDVNKGYEESAAAGVAEYQIL 96
QQ P L+L P +TA + VN G E A + +
Sbjct: 83 QQTATEARRLLSPGLALASGDAESPNLVSTAVAVSEDYKVPVNSGMETERKASKRKKEHS 142
Query: 97 NRQASPHSAVSNSFS 111
Q S A +S S
Sbjct: 143 ESQPSSSKAEGSSRS 157
>UNIPROTKB|F1SHK4 [details] [associations]
symbol:NKX2-8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030324 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0003690 GO:GO:0007409
GO:GO:0050680 GeneTree:ENSGT00700000104098 KO:K09347 OMA:ERSHYPS
EMBL:CT757474 RefSeq:XP_001925375.2 Ensembl:ENSSSCT00000002176
GeneID:100155618 KEGG:ssc:100155618 Uniprot:F1SHK4
Length = 241
Score = 111 (44.1 bits), Expect = 0.00012, P = 0.00012
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 148 RKKLRL--TKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
RKK R+ +K Q+ LE F+Q L+ P+++ LAR L L P QV++WFQN R
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHR 136
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
R + T EQ LEESF L+ +A LA L L QV+VWFQNRR +
Sbjct: 37 RPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTK 89
>UNIPROTKB|Q6F2E2 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048264 "determination of ventral identity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030509
GO:GO:0048264 HSSP:P06602 EMBL:AC149072 HOVERGEN:HBG094147
UniGene:Str.30175 ProteinModelPortal:Q6F2E2 Xenbase:XB-GENE-483077
Uniprot:Q6F2E2
Length = 282
Score = 108 (43.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQNRRAR 199
DED + R + + T EQ LE+SFK++ + + +K+ L++ L L Q++ WFQNRR +
Sbjct: 125 DEDAAS-RARTKFTAEQLEELEKSFKENRYIGSSEKRRLSKVLKLSENQIKTWFQNRRMK 183
Score = 36 (17.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 15 LGFASAIETTPTNKANNINIVNHQQLQLP 43
LG+ S P N+ N+++ + L P
Sbjct: 27 LGYKSGNPDLPPNREYNVSLPSRVILPTP 55
>UNIPROTKB|F1NF97 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
morphogenesis" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021930 "cerebellar granule cell precursor
proliferation" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0048483 "autonomic nervous system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 IPI:IPI00603632
EMBL:AADN02057578 Ensembl:ENSGALT00000021775 OMA:PREEDCG
Uniprot:F1NF97
Length = 180
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 118 RERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESF--KQHSTLNPQK 175
RE D A++ G N R++ T EQ LE+ F K++ +L +
Sbjct: 51 REEDCGTALEENPPSAANAAANAAATGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERS 110
Query: 176 QALARQLNLRPRQVEVWFQNRRAR 199
Q +A L L QV++WFQNRRA+
Sbjct: 111 Q-IAHALKLSEVQVKIWFQNRRAK 133
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 94 (38.1 bits), Expect = 0.00014, P = 0.00014
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L +++ +++ +NL RQV++WFQNRR +
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMK 75
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 148 RKKLRL--TKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
RKK R+ +K Q+ LE F+Q L+ P+++ LA L L P QV++WFQN R
Sbjct: 78 RKKRRVLFSKAQTYELERRFRQQRYLSAPEREQLAHLLRLTPTQVKIWFQNHR 130
>UNIPROTKB|F1SLF3 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0000976 GO:GO:0009880
GO:GO:0030903 GeneTree:ENSGT00680000099625 OMA:QQKRVRT
EMBL:FP089556 RefSeq:XP_003125078.1 UniGene:Ssc.67372
Ensembl:ENSSSCT00000009097 GeneID:100521005 KEGG:ssc:100521005
Uniprot:F1SLF3
Length = 263
Score = 111 (44.1 bits), Expect = 0.00015, P = 0.00015
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 142 EDGVNARKKLR--LTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRA 198
+D ++K++R EQ LE+ F KQH+ + ++ LA QLNL QV VWFQNRR
Sbjct: 162 QDTERSQKRVRTMFNLEQLEELEKVFAKQHNLVGKKRAQLAAQLNLTENQVRVWFQNRRV 221
Query: 199 R 199
+
Sbjct: 222 K 222
>UNIPROTKB|Q5TM83 [details] [associations]
symbol:Nanog "Homeobox protein NANOG" species:57486 "Mus
musculus molossinus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001710 "mesodermal cell fate commitment" evidence=IGI]
[GO:0001714 "endodermal cell fate specification" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IGI;IDA] [GO:0017145 "stem cell division"
evidence=IDA] [GO:0019827 "stem cell maintenance" evidence=IDA;IMP]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0032526 "response to retinoic acid" evidence=IDA]
[GO:0042221 "response to chemical stimulus" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IDA] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048863 "stem cell differentiation" evidence=IDA;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1919200 GO:GO:0005634 GO:GO:0003714 GO:GO:0045931
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0044212 GO:GO:0032526 GO:GO:0001714
GO:GO:0019827 GO:GO:0030514 GO:GO:0017145 GO:GO:0001710 HSSP:P13297
HOVERGEN:HBG058783 GO:GO:0010454 UniGene:Mm.490052 UniGene:Mm.6047
EMBL:AB126939 ProteinModelPortal:Q5TM83 SMR:Q5TM83
PhosphoSite:Q5TM83 Uniprot:Q5TM83
Length = 305
Score = 112 (44.5 bits), Expect = 0.00016, P = 0.00016
Identities = 44/155 (28%), Positives = 72/155 (46%)
Query: 52 LSLGLPG-EIYPEAATATTKKNSNSIDVNKGYEE-SAAAGVAEYQILNRQASPHSAVSNS 109
+S+GLPG P + A+ N++S+ E S G A + ASP +
Sbjct: 1 MSVGLPGPHSLPSSEEASNSGNASSMPAVFHPENYSCLQGSATEMLCTEAASPRPS---- 56
Query: 110 FSSGRVVKRERDLXXXXXXXXXX-XXXRASDEDEDGVNARK-KLRLTKEQSAL--LEESF 165
S ++ D + +E+E+ V ARK K+R Q+ L L++ F
Sbjct: 57 -SEDLPLQGSPDSSTSPKQKLSSPEADKGPEEEENKVLARKQKMRTVFSQAQLCALKDRF 115
Query: 166 KQHSTLNPQK-QALARQLNLRPRQVEVWFQNRRAR 199
++ L+ Q+ Q L+ LNL +QV+ WFQN+R +
Sbjct: 116 QKQKYLSLQQMQELSSILNLSYKQVKTWFQNQRMK 150
>MGI|MGI:1919200 [details] [associations]
symbol:Nanog "Nanog homeobox" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IDA] [GO:0001710
"mesodermal cell fate commitment" evidence=IGI] [GO:0001714
"endodermal cell fate specification" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO;IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IMP] [GO:0003714
"transcription corepressor activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0010454 "negative regulation of cell
fate commitment" evidence=IGI;IDA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IDA] [GO:0019827 "stem cell maintenance" evidence=IDA;IMP]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0032526 "response to retinoic acid" evidence=IDA]
[GO:0035019 "somatic stem cell maintenance" evidence=ISO]
[GO:0042221 "response to chemical stimulus" evidence=IDA]
[GO:0042664 "negative regulation of endodermal cell fate
specification" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=ISO] [GO:0045596 "negative regulation of
cell differentiation" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0048863
"stem cell differentiation" evidence=IDA;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1919200 GO:GO:0003714
GO:GO:0005654 GO:GO:0008406 GO:GO:0045931 GO:GO:0008284
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032526
GO:GO:0009880 GO:GO:0001158 GO:GO:0001714 GO:GO:0019827
GO:GO:0030514 GO:GO:0017145 GO:GO:0042664 GO:GO:0001710
eggNOG:NOG297592 HOGENOM:HOG000236291 HOVERGEN:HBG058783
OrthoDB:EOG40VVQM CTD:79923 GeneTree:ENSGT00670000098076 KO:K10164
OMA:TWTNPTW EMBL:AB093574 EMBL:AY278951 EMBL:AF507043 EMBL:AY455282
EMBL:AY455285 EMBL:AK010332 IPI:IPI00109731 IPI:IPI00807949
RefSeq:NP_082292.1 UniGene:Mm.490052 UniGene:Mm.6047 PDB:2VI6
PDBsum:2VI6 ProteinModelPortal:Q80Z64 SMR:Q80Z64 DIP:DIP-29925N
DIP:DIP-29932N IntAct:Q80Z64 STRING:Q80Z64 PRIDE:Q80Z64
Ensembl:ENSMUST00000012540 Ensembl:ENSMUST00000112580
Ensembl:ENSMUST00000112581 GeneID:71950 KEGG:mmu:71950
InParanoid:Q80Z64 EvolutionaryTrace:Q80Z64 NextBio:335028
Bgee:Q80Z64 Genevestigator:Q80Z64 GermOnline:ENSMUSG00000012396
Uniprot:Q80Z64
Length = 305
Score = 112 (44.5 bits), Expect = 0.00016, P = 0.00016
Identities = 44/155 (28%), Positives = 72/155 (46%)
Query: 52 LSLGLPG-EIYPEAATATTKKNSNSIDVNKGYEE-SAAAGVAEYQILNRQASPHSAVSNS 109
+S+GLPG P + A+ N++S+ E S G A + ASP +
Sbjct: 1 MSVGLPGPHSLPSSEEASNSGNASSMPAVFHPENYSCLQGSATEMLCTEAASPRPS---- 56
Query: 110 FSSGRVVKRERDLXXXXXXXXXX-XXXRASDEDEDGVNARK-KLRLTKEQSAL--LEESF 165
S ++ D + +E+E+ V ARK K+R Q+ L L++ F
Sbjct: 57 -SEDLPLQGSPDSSTSPKQKLSSPEADKGPEEEENKVLARKQKMRTVFSQAQLCALKDRF 115
Query: 166 KQHSTLNPQK-QALARQLNLRPRQVEVWFQNRRAR 199
++ L+ Q+ Q L+ LNL +QV+ WFQN+R +
Sbjct: 116 QKQKYLSLQQMQELSSILNLSYKQVKTWFQNQRMK 150
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 93 (37.8 bits), Expect = 0.00018, P = 0.00018
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 148 RKKLRL--TKEQSALLEESF--KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
R+K R+ T Q LE+ F ++ T+ +K LA L L RQV++WFQNRRA+
Sbjct: 1 REKYRVVYTDHQRLELEKEFHYNRYITIR-RKSELAANLRLSERQVKIWFQNRRAK 55
>UNIPROTKB|G3MWL7 [details] [associations]
symbol:G3MWL7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:DAAA02030352
Ensembl:ENSBTAT00000063161 Uniprot:G3MWL7
Length = 263
Score = 110 (43.8 bits), Expect = 0.00020, P = 0.00020
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 137 ASDED-EDGVNARKKLR--LTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEVW 192
A +D +D + K++R EQ LE+ F KQH+ + ++ LA QLNL QV VW
Sbjct: 156 AQAQDLQDTERSPKRIRTMFNLEQLEELEKVFAKQHNIVGKKRAQLAAQLNLTENQVRVW 215
Query: 193 FQNRRAR 199
FQNRR +
Sbjct: 216 FQNRRVK 222
>MGI|MGI:1270158 [details] [associations]
symbol:Nkx2-9 "NK2 transcription factor related, locus 9
(Drosophila)" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0030323 "respiratory tube development"
evidence=IMP] [GO:0030324 "lung development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1270158 GO:GO:0005634 GO:GO:0030324
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007409 GO:GO:0050680
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:Y15741 IPI:IPI00119496 UniGene:Mm.129420
ProteinModelPortal:O70584 SMR:O70584 STRING:O70584 PRIDE:O70584
InParanoid:O70584 Genevestigator:O70584
GermOnline:ENSMUSG00000058669 Uniprot:O70584
Length = 235
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 136 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQ 194
R S + ++++ +K Q+ LE F+Q L+ P+++ LAR L L P QV++WFQ
Sbjct: 71 RESPGSDPEKRRKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQ 130
Query: 195 NRR 197
N R
Sbjct: 131 NHR 133
>RGD|1310780 [details] [associations]
symbol:Hoxb3 "homeo box B3" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0021546 "rhombomere development"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0060216 "definitive hemopoiesis"
evidence=IEA;ISO] [GO:0060324 "face development" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1310780 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
OrthoDB:EOG4S4PH1 GO:GO:0021546 EMBL:BC166859 IPI:IPI00194971
UniGene:Rn.208556 SMR:B2RYQ0 STRING:B2RYQ0
Ensembl:ENSRNOT00000011027 Genevestigator:B2RYQ0 Uniprot:B2RYQ0
Length = 428
Score = 97 (39.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 139 DEDEDGVNARKKLRL--TKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQN 195
D+ G A K+ R T Q LE+ F + L P++ +A LNL RQ+++WFQN
Sbjct: 177 DKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQN 236
Query: 196 RRAR 199
RR +
Sbjct: 237 RRMK 240
Score = 54 (24.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 33 NIVNHQQLQLPKGTCFEPSLSL----GLPGEIYPEAATATTKKNSNS 75
N H + + G+C P L+ PG P AA +T NSN+
Sbjct: 59 NAAPHAKSKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSNN 105
>UNIPROTKB|F1MJZ3 [details] [associations]
symbol:F1MJZ3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0000976 GO:GO:0009880
GO:GO:0030903 GeneTree:ENSGT00680000099625 OMA:QQKRVRT
EMBL:DAAA02030352 IPI:IPI00697755 Ensembl:ENSBTAT00000047327
Uniprot:F1MJZ3
Length = 272
Score = 110 (43.8 bits), Expect = 0.00021, P = 0.00021
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 137 ASDED-EDGVNARKKLR--LTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEVW 192
A +D +D + K++R EQ LE+ F KQH+ + ++ LA QLNL QV VW
Sbjct: 165 AQAQDLQDTERSPKRIRTMFNLEQLEELEKVFAKQHNIVGKKRAQLAAQLNLTENQVRVW 224
Query: 193 FQNRRAR 199
FQNRR +
Sbjct: 225 FQNRRVK 231
>MGI|MGI:96184 [details] [associations]
symbol:Hoxb3 "homeobox B3" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000979 "RNA polymerase
II core promoter sequence-specific DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI] [GO:0021546 "rhombomere development" evidence=IDA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IGI]
[GO:0030878 "thyroid gland development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IDA] [GO:0051216
"cartilage development" evidence=IGI] [GO:0060216 "definitive
hemopoiesis" evidence=IGI] [GO:0060324 "face development"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96184
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615 OMA:ATYYDNT
OrthoDB:EOG4S4PH1 CTD:3213 GO:GO:0021546 EMBL:X66177 EMBL:S35628
EMBL:U02278 EMBL:M18168 IPI:IPI00315401 PIR:S20963
RefSeq:NP_001073338.1 RefSeq:NP_034588.2 UniGene:Mm.342481
ProteinModelPortal:P09026 SMR:P09026 STRING:P09026 PaxDb:P09026
PRIDE:P09026 Ensembl:ENSMUST00000055334 Ensembl:ENSMUST00000093944
GeneID:15410 KEGG:mmu:15410 InParanoid:P09026 NextBio:288128
Bgee:P09026 CleanEx:MM_HOXB3 Genevestigator:P09026
GermOnline:ENSMUSG00000048763 Uniprot:P09026
Length = 433
Score = 97 (39.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 139 DEDEDGVNARKKLRL--TKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQN 195
D+ G A K+ R T Q LE+ F + L P++ +A LNL RQ+++WFQN
Sbjct: 182 DKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQN 241
Query: 196 RRAR 199
RR +
Sbjct: 242 RRMK 245
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 33 NIVNHQQLQLPKGTCFEPSLSL----GLPGEIYPEAATATTKKNSNS 75
N H + + G+C P L+ PG P AA +T NSN+
Sbjct: 59 NAAPHAKSKELNGSCMRPGLAPEPLPAPPGSPPPSAAPTSTTSNSNN 105
>UNIPROTKB|E2R6Q3 [details] [associations]
symbol:HOXD12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
Ensembl:ENSCAFT00000021306 Uniprot:E2R6Q3
Length = 280
Score = 110 (43.8 bits), Expect = 0.00023, P = 0.00023
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
G +K+ TK+Q A LE F + +N QK+ L+ +LNL +QV++WFQNRR +
Sbjct: 210 GRTRKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMK 266
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 92 (37.4 bits), Expect = 0.00024, P = 0.00024
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L +++ ++R ++L RQV++WFQNRR +
Sbjct: 21 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMK 73
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 92 (37.4 bits), Expect = 0.00024, P = 0.00024
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L +++ ++R ++L RQV++WFQNRR +
Sbjct: 22 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMK 74
>UNIPROTKB|E2RFP2 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
NextBio:20893009 Uniprot:E2RFP2
Length = 254
Score = 109 (43.4 bits), Expect = 0.00025, P = 0.00025
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 142 EDGVNARK-KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
E G ARK + TKEQ LE F H+ L ++ +A L+L RQV+VWFQNRR +
Sbjct: 166 EGGSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 225
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 121 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 171
>UNIPROTKB|F1P2W4 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:AADN02047157
EMBL:AADN02047158 IPI:IPI00822098 Ensembl:ENSGALT00000038553
Uniprot:F1P2W4
Length = 250
Score = 101 (40.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 141 DEDGVNARKKLRLTKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQNRRAR 199
D+DG + + +Q LE++F+Q L P++ LA L + QV+VWFQNRR +
Sbjct: 124 DKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 183
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 61 YPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQAS 101
+P+AA ++ + S ++ + + AA A +R A+
Sbjct: 6 FPDAARSSLRSGSGAVSAARPFRSGGAAVPAAVPGASRAAA 46
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 109 (43.4 bits), Expect = 0.00029, P = 0.00029
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 142 QVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 192
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 109 (43.4 bits), Expect = 0.00031, P = 0.00031
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + EQ+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 148 QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAK 198
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 109 (43.4 bits), Expect = 0.00031, P = 0.00031
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + EQ+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 148 QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAK 198
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 91 (37.1 bits), Expect = 0.00031, P = 0.00031
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K+ TK Q+ LE+ F + L +++ ++R ++L RQV++WFQNRR +
Sbjct: 2 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMK 54
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 109 (43.4 bits), Expect = 0.00032, P = 0.00032
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + EQ+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 157 QVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAK 207
>UNIPROTKB|F1S1H4 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:QPPAPVW EMBL:CU928405
RefSeq:XP_003131424.2 Ensembl:ENSSSCT00000018915 GeneID:100516574
KEGG:ssc:100516574 Uniprot:F1S1H4
Length = 254
Score = 108 (43.1 bits), Expect = 0.00033, P = 0.00033
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 142 EDGVNARK-KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
E G ARK + TKEQ LE F H+ L ++ +A L+L RQV+VWFQNRR +
Sbjct: 166 EAGSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMK 225
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 141 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 191
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 142 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 192
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 141 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 191
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 143 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 193
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 142 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 192
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 108 (43.1 bits), Expect = 0.00039, P = 0.00039
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 141 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 191
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 108 (43.1 bits), Expect = 0.00039, P = 0.00039
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
++R + +Q+ LE+ F+ L+P +++ LA+ L L RQV+ WFQNRRA+
Sbjct: 143 QVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 193
>WB|WBGene00003102 [details] [associations]
symbol:mab-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
OMA:TSANFGE NextBio:891072 Uniprot:P10038
Length = 200
Score = 98 (39.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRRAR 199
G + R + ++ Q+ LE+ F H L ++Q ++ L+L RQV++WFQNRR +
Sbjct: 115 GESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMK 171
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 51 SLSLGLPGE-IYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSN 108
S+ G G+ Y A T S S + SAAA A + + H+ ++N
Sbjct: 2 SMYPGWTGDDSYWAGAGTTASSQSASSGTSASASSSAAAAAAANNLKTYELYNHTYMNN 60
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 90 (36.7 bits), Expect = 0.00041, P = 0.00041
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 148 RKKLRL--TKEQSALLEESF--KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
++K R+ T Q LE+ F ++ T+ +K LA L L RQV++WFQNRRA+
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIR-RKSELAANLGLSERQVKIWFQNRRAK 55
>UNIPROTKB|Q9YH70 [details] [associations]
symbol:Xvent-2B "Xvent-2B protein" species:8355 "Xenopus
laevis" [GO:0005515 "protein binding" evidence=IPI] [GO:0005667
"transcription factor complex" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 HSSP:P06602 EMBL:AJ131095 RefSeq:NP_001177334.1
UniGene:Xl.82907 ProteinModelPortal:Q9YH70 SMR:Q9YH70
GeneID:100337598 KEGG:xla:100337598 CTD:100337598
HOVERGEN:HBG067091 Uniprot:Q9YH70
Length = 334
Score = 109 (43.4 bits), Expect = 0.00044, P = 0.00044
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 97 NRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARK-KLRLTK 155
+ Q + S S S S + R + DE+G R+ + T
Sbjct: 140 SNQVASKSGYSTSTDSDYESEASRSSSAAPEGDATMSLSPSDTSDEEGKMGRRLRTAFTS 199
Query: 156 EQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
+Q + LE++F++H L +++ LA +L L Q++ WFQNRR +
Sbjct: 200 DQISTLEKTFQKHRYLGASERRKLAAKLQLSEVQIKTWFQNRRMK 244
>UNIPROTKB|F1PAB5 [details] [associations]
symbol:VENTX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00610000086217
OMA:DWLSQSS EMBL:AAEX03015730 EMBL:AAEX03015731
Ensembl:ENSCAFT00000021323 Uniprot:F1PAB5
Length = 260
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 141 DEDGVNA-RKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRA 198
D DG+ R + T EQ + LE +F++ L P +++ LAR + L Q++ WFQNRR
Sbjct: 85 DGDGLRVPRVRTAFTAEQLSTLESAFRRRRYLGPLERRRLARDMRLSEVQIKTWFQNRRM 144
Query: 199 R 199
+
Sbjct: 145 K 145
>ZFIN|ZDB-GENE-980526-403 [details] [associations]
symbol:nkx2.2a "NK2 transcription factor related
2a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0014044 "Schwann cell development" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0033504 "floor
plate development" evidence=IMP] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IGI] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation" evidence=IMP]
[GO:0021508 "floor plate formation" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-403 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0031018 GO:GO:0014044 GO:GO:0008347
GO:GO:0021530 GO:GO:0021508 GO:GO:0021514
GeneTree:ENSGT00700000104098 EMBL:BX927409 IPI:IPI00817820
Ensembl:ENSDART00000140549 ArrayExpress:F1QNE4 Bgee:F1QNE4
Uniprot:F1QNE4
Length = 273
Score = 107 (42.7 bits), Expect = 0.00052, P = 0.00052
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 137 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQN 195
+S+ + G ++++ +K Q+ LE F+Q L+ P+++ LA + L P QV++WFQN
Sbjct: 120 SSNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQN 179
Query: 196 RR 197
R
Sbjct: 180 HR 181
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 95 (38.5 bits), Expect = 0.00054, P = 0.00054
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 149 KKLRLTKEQSALL--EESF-KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
K++R S LL E +F K H + +++ LA L+L QV+VWFQNRR +
Sbjct: 37 KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTK 90
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 108 (43.1 bits), Expect = 0.00055, P = 0.00055
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
++R T +Q+ LE F L+P+++ LA QL L RQV+ WFQNRRA+
Sbjct: 198 QIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAK 248
>SGD|S000000694 [details] [associations]
symbol:HMRA1 "Silenced copy of a1 at HMR" species:4932
"Saccharomyces cerevisiae" [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 SGD:S000000694 GO:GO:0005634 GO:GO:0003714
GO:GO:0043565 EMBL:X59720 EMBL:BK006937 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 PIR:A90983 RefSeq:NP_010021.1
ProteinModelPortal:P0CY11 SMR:P0CY11 IntAct:P0CY11
EnsemblFungi:YCR097W GeneID:850459 KEGG:sce:YCR097W CYGD:YCR097w
KO:K09358 NextBio:966093 ArrayExpress:P0CY11 GermOnline:YCR097W
GO:GO:0007532 Uniprot:P0CY11
Length = 126
Score = 91 (37.1 bits), Expect = 0.00062, P = 0.00062
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 150 KLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
K ++ + A LE+ F++ +LN +K+ +A++ + P QV VWF N+R R
Sbjct: 74 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMR 124
>UNIPROTKB|Q06615 [details] [associations]
symbol:noto "Homeobox protein notochord" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=IC] [GO:0014028
"notochord formation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0014028
HOVERGEN:HBG082047 EMBL:Z19577 EMBL:BC123237 PIR:A46305
RefSeq:NP_001081625.1 UniGene:Xl.35 HSSP:P14653
ProteinModelPortal:Q06615 GeneID:397961 KEGG:xla:397961 CTD:397961
Xenbase:XB-GENE-865187 Uniprot:Q06615
Length = 236
Score = 96 (38.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 149 KKLR--LTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
K++R T EQ LE+ F KQ + ++ LA LNL QV+VWFQNRR +
Sbjct: 139 KRIRTVFTPEQLEKLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIK 192
Score = 42 (19.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 33 NIVNHQQLQLPKGTCFEP 50
N+ Q +++P+G C P
Sbjct: 90 NMAQQQPMRMPRGECLCP 107
>UNIPROTKB|O15522 [details] [associations]
symbol:NKX2-8 "Homeobox protein Nkx-2.8" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0001889 "liver development"
evidence=NAS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030324 GO:GO:0043565
GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0003690
GO:GO:0007409 GO:GO:0050680 HOGENOM:HOG000231923 HOVERGEN:HBG006689
EMBL:AF000295 EMBL:AF000297 EMBL:AF000296 EMBL:AK313537
EMBL:BC041090 IPI:IPI00007308 RefSeq:NP_055175.2 UniGene:Hs.234763
ProteinModelPortal:O15522 SMR:O15522 STRING:O15522 PRIDE:O15522
Ensembl:ENST00000258829 GeneID:26257 KEGG:hsa:26257 UCSC:uc001wtx.3
CTD:26257 GeneCards:GC14M037049 H-InvDB:HIX0026629 HGNC:HGNC:16364
MIM:603245 neXtProt:NX_O15522 PharmGKB:PA38402 eggNOG:NOG243784
InParanoid:O15522 KO:K09347 OMA:ERSHYPS OrthoDB:EOG466VN6
PhylomeDB:O15522 GenomeRNAi:26257 NextBio:48495 Bgee:O15522
CleanEx:HS_NKX2-8 Genevestigator:O15522 GermOnline:ENSG00000136327
Uniprot:O15522
Length = 239
Score = 105 (42.0 bits), Expect = 0.00068, P = 0.00068
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 148 RKKLRL--TKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
RKK R+ +K Q+ LE F+Q L+ P+++ LA L L P QV++WFQN R
Sbjct: 84 RKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHR 136
>UNIPROTKB|O13004 [details] [associations]
symbol:GSC2 "Goosecoid 2" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG244876 HOGENOM:HOG000112823 OrthoDB:EOG4RFKV2
GeneTree:ENSGT00700000104273 EMBL:AADN02043256 EMBL:Y09850
IPI:IPI00821873 Ensembl:ENSGALT00000038540 InParanoid:O13004
Uniprot:O13004
Length = 61
Score = 88 (36.0 bits), Expect = 0.00069, P = 0.00069
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
R + T+EQ LE F Q+ + ++ LA +++L+ +VEVWF+NRRA+
Sbjct: 3 RHRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAK 55
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 88 (36.0 bits), Expect = 0.00069, P = 0.00069
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 154 TKEQSALLEESF--KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
T Q LE+ F ++ T+ +K LA L L RQV++WFQNRRA+
Sbjct: 15 TDHQRLELEKEFHYSRYITIR-RKSELAANLGLTERQVKIWFQNRRAK 61
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 88 (36.0 bits), Expect = 0.00069, P = 0.00069
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 148 RKKLRLTKEQSALLEESF--KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
R+ T EQ LE+ F K++ +L + Q +A L L QV++WFQNRRA+
Sbjct: 4 RRGQHXTSEQLLELEKEFHCKKYLSLTERSQ-IAHALKLSEVQVKIWFQNRRAK 56
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 99 (39.9 bits), Expect = 0.00069, P = 0.00069
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
+++ TKEQ LE F H+ L ++ +A L+L RQV+VWFQNRR +
Sbjct: 39 KERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMK 91
>UNIPROTKB|O42230 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG315879 HOVERGEN:HBG003967 KO:K09321 OrthoDB:EOG4N5VXB
EMBL:AF022151 IPI:IPI00603632 RefSeq:NP_990399.1 UniGene:Gga.565
ProteinModelPortal:O42230 SMR:O42230 STRING:O42230 GeneID:395950
KEGG:gga:395950 CTD:2637 HOGENOM:HOG000046878 InParanoid:O42230
NextBio:20816015 Uniprot:O42230
Length = 340
Score = 107 (42.7 bits), Expect = 0.00079, P = 0.00079
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 118 RERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESF--KQHSTLNPQK 175
RE D A++ G N R++ T EQ LE+ F K++ +L +
Sbjct: 211 REEDCGTALEENPPSAANAAANAAATGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERS 270
Query: 176 QALARQLNLRPRQVEVWFQNRRAR 199
Q +A L L QV++WFQNRRA+
Sbjct: 271 Q-IAHALKLSEVQVKIWFQNRRAK 293
>UNIPROTKB|P14651 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 EMBL:CH471109 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 OMA:ATYYDNT OrthoDB:EOG4S4PH1 CTD:3213 EMBL:X16667
EMBL:U59298 EMBL:AF287967 EMBL:AK291182 EMBL:AK315102 EMBL:X16175
IPI:IPI00027259 PIR:S07543 RefSeq:NP_002137.4 UniGene:Hs.654560
ProteinModelPortal:P14651 SMR:P14651 STRING:P14651 DMDM:215274007
PaxDb:P14651 PRIDE:P14651 DNASU:3213 Ensembl:ENST00000311626
Ensembl:ENST00000470495 Ensembl:ENST00000476342
Ensembl:ENST00000498678 GeneID:3213 KEGG:hsa:3213 UCSC:uc002inn.3
GeneCards:GC17M046626 HGNC:HGNC:5114 HPA:CAB009860 MIM:142966
neXtProt:NX_P14651 PharmGKB:PA29390 InParanoid:P14651
PhylomeDB:P14651 ChiTaRS:HOXB3 GenomeRNAi:3213 NextBio:12784
ArrayExpress:P14651 Bgee:P14651 CleanEx:HS_HOXB3
Genevestigator:P14651 GermOnline:ENSG00000120093 GO:GO:0021546
Uniprot:P14651
Length = 431
Score = 97 (39.2 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 139 DEDEDGVNARKKLRL--TKEQSALLEESFKQHSTL-NPQKQALARQLNLRPRQVEVWFQN 195
D+ G A K+ R T Q LE+ F + L P++ +A LNL RQ+++WFQN
Sbjct: 179 DKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQN 238
Query: 196 RRAR 199
RR +
Sbjct: 239 RRMK 242
Score = 48 (22.0 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 33 NIVNHQQLQLPKGTCFEPSLS---LGLP-GEIYPEAA-TATTKKNSN 74
N H + + G+C P L+ L P G P AA T+ T +SN
Sbjct: 59 NAAPHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSN 105
>UNIPROTKB|F1P4T4 [details] [associations]
symbol:HOXD13 "Homeobox protein Hox-D13" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00670000097683
IPI:IPI00598090 EMBL:AADN02020034 Ensembl:ENSGALT00000015092
OMA:CANDQTQ Uniprot:F1P4T4
Length = 111
Score = 87 (35.7 bits), Expect = 0.00091, P = 0.00091
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
+K++ TK Q LE + + +N K+ ++ NL RQV +WFQNRR +
Sbjct: 46 KKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVK 98
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 87 (35.7 bits), Expect = 0.00091, P = 0.00091
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLNPQKQA-LARQLNLRPRQVEVWFQNRRAR 199
G R + T++Q LE+ F + L +++ +A L L RQ+++WFQNRR +
Sbjct: 8 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMK 64
>UNIPROTKB|C9K088 [details] [associations]
symbol:MNX1 "Motor neuron and pancreas homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AC006357 HGNC:HGNC:4979 IPI:IPI00925104
ProteinModelPortal:C9K088 SMR:C9K088 STRING:C9K088
Ensembl:ENST00000428439 OMA:LERQFRM ArrayExpress:C9K088 Bgee:C9K088
Uniprot:C9K088
Length = 82
Score = 87 (35.7 bits), Expect = 0.00091, P = 0.00091
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRR 197
R + T +Q LE FK + L+ P++ +A L L QV++WFQNRR
Sbjct: 31 RPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRR 81
>RGD|1564874 [details] [associations]
symbol:Nkx1-1 "NK1 transcription factor related, locus 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043467 "regulation of generation of precursor
metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
system process" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
Length = 60
Score = 87 (35.7 bits), Expect = 0.00091, P = 0.00091
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 148 RKKLRLTKEQSALLEESFKQHSTLNP-QKQALARQLNLRPRQVEVWFQNRRAR 199
R + T EQ LE FK L+ ++ LA L+L QV++WFQNRR +
Sbjct: 3 RARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 55
>WB|WBGene00000436 [details] [associations]
symbol:ceh-12 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080753 EMBL:X17076 PIR:S09504
PIR:T32764 RefSeq:NP_491693.1 UniGene:Cel.19039
ProteinModelPortal:P17487 SMR:P17487 EnsemblMetazoa:F33D11.4
GeneID:172255 KEGG:cel:CELE_F33D11.4 UCSC:F33D11.4 CTD:172255
WormBase:F33D11.4 eggNOG:NOG284589 HOGENOM:HOG000017276
InParanoid:P17487 NextBio:874695 Uniprot:P17487
Length = 180
Score = 101 (40.6 bits), Expect = 0.00092, P = 0.00092
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 144 GVNARKKLRLTKEQSALLEESFKQHSTLN-PQKQALARQLNLRPRQVEVWFQNRRAR 199
G R + + EQ LE+ F + L+ P++ LA+QL+L Q+++WFQNRR +
Sbjct: 108 GKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMK 164
>UNIPROTKB|Q91770 [details] [associations]
symbol:not2 "Homeobox protein not2" species:8355 "Xenopus
laevis" [GO:0014028 "notochord formation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06602
GO:GO:0014028 EMBL:L19566 EMBL:BC123277 PIR:I51438
RefSeq:NP_001081191.1 UniGene:Xl.1066 ProteinModelPortal:Q91770
GeneID:397703 KEGG:xla:397703 CTD:397703 Xenbase:XB-GENE-6252631
HOVERGEN:HBG082047 Uniprot:Q91770
Length = 233
Score = 96 (38.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 149 KKLR--LTKEQSALLEESF-KQHSTLNPQKQALARQLNLRPRQVEVWFQNRRAR 199
K++R T EQ LE+ F KQ + ++ LA LNL QV+VWFQNRR +
Sbjct: 136 KRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIK 189
Score = 40 (19.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 33 NIVNHQQLQLPKGTCFEP 50
N+ Q +++P+G C P
Sbjct: 87 NMAQAQPMRMPRGECLCP 104
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 199 186 0.00083 110 3 11 23 0.38 33
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 590 (63 KB)
Total size of DFA: 147 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.52u 0.15s 17.67t Elapsed: 00:00:01
Total cpu time: 17.53u 0.15s 17.68t Elapsed: 00:00:01
Start: Fri May 10 06:09:19 2013 End: Fri May 10 06:09:20 2013
WARNINGS ISSUED: 1