Query 029107
Match_columns 199
No_of_seqs 118 out of 175
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 12:13:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hue_A Anti-silencing protein 100.0 1.1E-85 3.7E-90 548.3 16.8 170 5-175 6-175 (175)
2 1roc_A Anti-silencing protein 100.0 2.1E-84 7.3E-89 532.1 17.1 155 5-159 1-155 (155)
3 2idc_A Anti-silencing protein 100.0 8.1E-84 2.8E-88 538.5 18.2 162 4-165 1-162 (179)
4 2i32_A Anti-silencing factor 1 100.0 9.6E-84 3.3E-88 539.1 16.0 158 4-161 24-181 (182)
5 2io5_A ASF1A protein; chaperon 100.0 1.2E-83 4.3E-88 536.0 16.3 160 4-163 2-161 (175)
6 2cu9_A Spcia1, histone chapero 100.0 1.2E-82 4E-87 524.4 18.7 155 6-160 1-161 (161)
7 2ag4_A GM2-AP, ganglioside GM2 64.2 8.4 0.00029 30.5 4.6 42 7-48 15-56 (164)
8 3sb1_A Hydrogenase expression 27.7 52 0.0018 26.6 3.7 26 44-73 113-138 (160)
9 2xzz_A Protein-glutamine gamma 27.3 1.8E+02 0.0062 21.2 8.9 68 13-87 9-77 (102)
10 3vhl_A Dedicator of cytokinesi 15.6 63 0.0022 27.8 1.8 12 109-120 14-25 (288)
No 1
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=100.00 E-value=1.1e-85 Score=548.28 Aligned_cols=170 Identities=52% Similarity=0.944 Sum_probs=162.0
Q ss_pred ccceEEEeeEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEEEEecCCCCCCCeeEeeEEecceeceeEEEEEEeCCC
Q 029107 5 TMSTVNIANVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPP 84 (199)
Q Consensus 5 ~Ms~V~i~~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKiiYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadpP 84 (199)
+||+|+|+||+|+|||++|++||+|||+|||+++|++|||||+||||||+|++|||+||+++|||+++|+|||+|+|+||
T Consensus 6 ~ms~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~dleWkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpP 85 (175)
T 2hue_A 6 NSSIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPP 85 (175)
T ss_dssp -CCSEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSCEEEEEEEESCTTCGGGEEEEEEEEECSCCSEEEEEEEEECCC
T ss_pred CCCEEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCcEEEEEEEcCCCCccCCeEeeEEEECCccceeEEEEEEcCCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeeeEEEEEEEEECCeEEEEEEEEeeeccCCcccccCCCCccccceEEEeecCCCCeeeeeeecCCCCCCC
Q 029107 85 DPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYGDEQLREEPPQKVLIDTVQRNILSDKPRVTKFPINFHPEHAE 164 (199)
Q Consensus 85 d~~kIP~~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~~p~~dkl~R~Il~~kPRVTrF~I~Wd~~~~~ 164 (199)
|+++||.+||+||||||||||||+|||+||||||||+|.+++|+||||.++++++|+|+||++|||||||+|+||+++++
T Consensus 86 d~~~IP~~dilGvTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~~~~~d~l~R~Il~~kPRVTrf~I~Wd~~~~~ 165 (175)
T 2hue_A 86 SAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEEELRENPPAKVQVDHIVRNILAEKPRVTRFNIVWDNENEG 165 (175)
T ss_dssp CGGGSCHHHHTSCEEEEEEEEETTEEEEEEEEEEEEEESSHHHHHSCCSSCCGGGEEEEECTTCCEEEECCCCCCTTTCC
T ss_pred ChhhCChhhccceEEEEEEEEECCeEEEEEEEEEecccCChHHhhCCCCCccHHHeeehhcCCCceEEeeeeccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987766
Q ss_pred CCCCCCCCCCC
Q 029107 165 SGEEPPPPPHH 175 (199)
Q Consensus 165 ~~~~~~~~~~~ 175 (199)
+++||+||++
T Consensus 166 -~~~~~~~~~~ 175 (175)
T 2hue_A 166 -DLYPPEQPGV 175 (175)
T ss_dssp -CSSCC-----
T ss_pred -ccCCcccCCC
Confidence 8999998764
No 2
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=100.00 E-value=2.1e-84 Score=532.11 Aligned_cols=155 Identities=55% Similarity=0.998 Sum_probs=154.2
Q ss_pred ccceEEEeeEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEEEEecCCCCCCCeeEeeEEecceeceeEEEEEEeCCC
Q 029107 5 TMSTVNIANVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPP 84 (199)
Q Consensus 5 ~Ms~V~i~~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKiiYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadpP 84 (199)
+||+|+|+||+|+|||++|++||+|||+|||+++|++|||||++|||||+|++|||+||+++|||+++|+|||+|+|+||
T Consensus 1 ~ms~V~i~~V~vl~np~~f~~p~~feI~fEc~e~L~~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpP 80 (155)
T 1roc_A 1 GASIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPP 80 (155)
T ss_dssp CCCSEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCC
T ss_pred CCcEEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeeeEEEEEEEEECCeEEEEEEEEeeeccCCcccccCCCCccccceEEEeecCCCCeeeeeeecCC
Q 029107 85 DPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYGDEQLREEPPQKVLIDTVQRNILSDKPRVTKFPINFH 159 (199)
Q Consensus 85 d~~kIP~~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~~p~~dkl~R~Il~~kPRVTrF~I~Wd 159 (199)
|+++||.+||+||||||||||||+|||+||||||||+|+|+||+||||.+|++|||+|+||++|||||||+|+||
T Consensus 81 d~~~Ip~~dilGvTvillt~sY~~qEFiRVGYYVnn~Y~d~el~enpP~~~~~d~l~R~Il~~kPRVTrf~I~Wd 155 (155)
T 1roc_A 81 SAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEEELRENPPAKVQVDHIVRNILAEKPRVTRFNIVWD 155 (155)
T ss_dssp CGGGCCTHHHHSCEEEEEEEEETTEEEEEEEEEEEEEESSHHHHHSCCSSCCGGGEEEEECTTSCEEEECCCCCC
T ss_pred CcccCChhhcceeEEEEEEEEECCcEEEEEEEEEeeeeCChHHccCCCCCcchHHEEEeecCCCceEEeeccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997
No 3
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-84 Score=538.51 Aligned_cols=162 Identities=52% Similarity=0.958 Sum_probs=156.1
Q ss_pred cccceEEEeeEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEEEEecCCCCCCCeeEeeEEecceeceeEEEEEEeCC
Q 029107 4 ETMSTVNIANVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADP 83 (199)
Q Consensus 4 ~~Ms~V~i~~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKiiYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadp 83 (199)
.+||.|+|+||+|+|||++|++||+|||+|||+++|++|||||+||||||+|++|||+||+++|||+++|+|||+|+|+|
T Consensus 1 ~~ms~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~dleWkliYVgSa~s~~~DQ~Ldsv~VGPi~~G~~kFv~~adp 80 (179)
T 2idc_A 1 SNASIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADP 80 (179)
T ss_dssp --CCSEEEEEEEEESCSEETTSCEEEEEEEEECSCCSSCEEEEEEECSCTTCGGGCEEEEEEEECSCCSEEEEEEEEECC
T ss_pred CCccEEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCcEEEEEEEcCCCcccCCeEeeEEEECCccceeEEEEEEcCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeeeEEEEEEEEECCeEEEEEEEEeeeccCCcccccCCCCccccceEEEeecCCCCeeeeeeecCCCCCC
Q 029107 84 PDPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYGDEQLREEPPQKVLIDTVQRNILSDKPRVTKFPINFHPEHA 163 (199)
Q Consensus 84 Pd~~kIP~~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~~p~~dkl~R~Il~~kPRVTrF~I~Wd~~~~ 163 (199)
||+++||.+||+|||||||||||++|||+||||||||+|.+++|+||||.+|++++|+|+||++|||||||+|+||+++.
T Consensus 81 Pd~~~IP~~dilGvTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~~~~~d~l~R~Il~~kPRVTrf~I~Wd~~~~ 160 (179)
T 2idc_A 81 PSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEEELRENPPAKVQVDHIVRNILAEKPRVTRFNIVWDNAAG 160 (179)
T ss_dssp CCGGGSCTTTTTSCEEEEEEEEETTEEEEEEEEEEEEEESSHHHHHSCCSSCCGGGEEEEECTTSCEEEECCCCCSCCC-
T ss_pred CCcccCChhhcceeEEEEEEEEECCeEEEEEEEEEecccCChHHhhCCCCCccHHHeeeeccCCCceEEeeccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CC
Q 029107 164 ES 165 (199)
Q Consensus 164 ~~ 165 (199)
+.
T Consensus 161 ~~ 162 (179)
T 2idc_A 161 AA 162 (179)
T ss_dssp --
T ss_pred cc
Confidence 43
No 4
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B
Probab=100.00 E-value=9.6e-84 Score=539.08 Aligned_cols=158 Identities=59% Similarity=1.072 Sum_probs=153.8
Q ss_pred cccceEEEeeEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEEEEecCCCCCCCeeEeeEEecceeceeEEEEEEeCC
Q 029107 4 ETMSTVNIANVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADP 83 (199)
Q Consensus 4 ~~Ms~V~i~~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKiiYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadp 83 (199)
++||+|+|+||+|+|||++|++||+|||+|||+++|++|||||+||||||+|++|||+||+++|||+++|+|||+|+|+|
T Consensus 24 ~~Ms~V~i~~V~VlnNp~~F~dP~~FeItfEcle~L~~dleWkliYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadp 103 (182)
T 2i32_A 24 GSMAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADA 103 (182)
T ss_dssp --CCSEEEEEEEECSCSEETTSCEEEEEEEEESSCCSSCEEEEEEEESCSSCGGGEEEEEEEEECCCCSEEEEEEEEECC
T ss_pred CCccEEEEEEEEEeCCchhcCCCeEEEEEEEEccccCCCcEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEeCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeeeEEEEEEEEECCeEEEEEEEEeeeccCCcccccCCCCccccceEEEeecCCCCeeeeeeecCCCC
Q 029107 84 PDPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYGDEQLREEPPQKVLIDTVQRNILSDKPRVTKFPINFHPE 161 (199)
Q Consensus 84 Pd~~kIP~~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~~p~~dkl~R~Il~~kPRVTrF~I~Wd~~ 161 (199)
||+++||.+|++|||||||||||++|||+||||||||+|.|+||+||||.+|+++||+|+||++|||||||+|+||++
T Consensus 104 Pd~~kIP~~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d~eL~enPP~~p~~d~l~R~Il~~kPRVTrF~I~Wd~~ 181 (182)
T 2i32_A 104 PNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDN 181 (182)
T ss_dssp CCGGGSCHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEESSHHHHHSCCSSCCGGGEEEEECTTSCEEEECCCCCC--
T ss_pred CCcccCChhhcceeEEEEEEEEECCeEEEEEEEEEeeeeCChHHccCCCCCcChHHeEeeecCCCceEEEeeeccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999974
No 5
>2io5_A ASF1A protein; chaperone, chaperone-structural protein complex; 2.70A {Homo sapiens} SCOP: b.1.22.1
Probab=100.00 E-value=1.2e-83 Score=535.96 Aligned_cols=160 Identities=58% Similarity=1.057 Sum_probs=153.8
Q ss_pred cccceEEEeeEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEEEEecCCCCCCCeeEeeEEecceeceeEEEEEEeCC
Q 029107 4 ETMSTVNIANVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADP 83 (199)
Q Consensus 4 ~~Ms~V~i~~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKiiYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadp 83 (199)
++||+|+|+||+|+|||++|++||+|||+|||+++|++|||||+||||||+|++|||+||+++|||+++|+|||+|+|+|
T Consensus 2 ~~Ms~V~l~~V~vlnNp~~f~~P~~FeI~fEc~e~L~~dleWkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adp 81 (175)
T 2io5_A 2 SHMAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADA 81 (175)
T ss_dssp --CCCEEEEEEEECSCSEETTSCEEEEEEEEESSCCCSCEEEEEEEECCTTCGGGEEEEEEEEECSCCSEEEEEEEEECC
T ss_pred CcccEEEEEEEEEeCCccccCCCeEEEEEEEeccccCCCcEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEeCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeeeeEEEEEEEEECCeEEEEEEEEeeeccCCcccccCCCCccccceEEEeecCCCCeeeeeeecCCCCCC
Q 029107 84 PDPSKIREEDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYGDEQLREEPPQKVLIDTVQRNILSDKPRVTKFPINFHPEHA 163 (199)
Q Consensus 84 Pd~~kIP~~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~~p~~dkl~R~Il~~kPRVTrF~I~Wd~~~~ 163 (199)
||+++||.+|++||||||||||||+|||+||||||||+|.|++|+||||.+|++++|+|+||++|||||||+|+||++++
T Consensus 82 Pd~~~IP~~dilGvTvillt~sY~~qEFiRVGYYVnneY~d~el~enPP~~~~~~~l~R~Il~~kPRVTrf~I~Wd~~~~ 161 (175)
T 2io5_A 82 PNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTE 161 (175)
T ss_dssp CCGGGSCHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEESSHHHHHSCCSSCCGGGEEEEECTTCCEEEECCCCCC----
T ss_pred CChhhCChhhcceeEEEEEEEEECCcEEEEEEEEEeeeeCChhhccCCCCCcchHHeEeeccCCCceEEeeeeccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998654
No 6
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=100.00 E-value=1.2e-82 Score=524.44 Aligned_cols=155 Identities=54% Similarity=0.977 Sum_probs=154.0
Q ss_pred cceEEEeeEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEEEEecCCCCCCCeeEeeEEecceeceeEEEEEEeCCCC
Q 029107 6 MSTVNIANVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPD 85 (199)
Q Consensus 6 Ms~V~i~~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKiiYVGSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadpPd 85 (199)
||+|+|+||+|+|||++|++||+|||+|||+++|++|||||++|||||+|++|||+||+++|||+++|+|||+|+|+|||
T Consensus 1 ms~V~i~~V~vlnnp~~f~~p~~feI~fEc~e~L~~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd 80 (161)
T 2cu9_A 1 MSIVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPN 80 (161)
T ss_dssp CCSEEEEEEEESSCSEETTSCEEEEEEEEECSCCSSCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCC
T ss_pred CCeEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-CCeeeeEEEEEEEEECCeEEEEEEEEeeeccCCcccccCCCC-----ccccceEEEeecCCCCeeeeeeecCC
Q 029107 86 PSKIRE-EDIIGVTVLLLTCSYLGQEFVRVGYYVNNDYGDEQLREEPPQ-----KVLIDTVQRNILSDKPRVTKFPINFH 159 (199)
Q Consensus 86 ~~kIP~-~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d~el~enpP~-----~p~~dkl~R~Il~~kPRVTrF~I~Wd 159 (199)
+++||. +|++||||||||||||+|||+||||||||+|+|++|+||||+ +|+++||+|+||++|||||||+|+||
T Consensus 81 ~~~IP~~~dilGvTvillt~sY~~qEFiRVGYYVnneY~d~el~enpP~~~~~~~p~~~~l~R~Il~~kPRVTrf~I~W~ 160 (161)
T 2cu9_A 81 IDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEMEGLNLQEMDDAEIKKVKVDISKVWRSILAEKPRVTRFNIQWD 160 (161)
T ss_dssp GGGSSCGGGGSEEEEEEEEEEETTEEEEEEEEEEEEEETTCCGGGSCHHHHTTSCCCGGGEEEEECTTSCEEEECCCCTT
T ss_pred hhHCCCcccceeeEEEEEEEEECCeEEEEEEEEEeceeCChHHccCCcchhccCCcchHHEEEeecCCCceEEEeccccC
Confidence 999999 999999999999999999999999999999999999999999 99999999999999999999999998
Q ss_pred C
Q 029107 160 P 160 (199)
Q Consensus 160 ~ 160 (199)
+
T Consensus 161 ~ 161 (161)
T 2cu9_A 161 N 161 (161)
T ss_dssp C
T ss_pred C
Confidence 5
No 7
>2ag4_A GM2-AP, ganglioside GM2 activator; complex of single chain lipid and fatty acids, lipid binding; HET: LP3 OLA; 1.80A {Homo sapiens} SCOP: b.95.1.1 PDB: 1tjj_A* 2af9_A* 2ag2_A* 1pu5_A* 2ag9_A* 1g13_A* 1pub_A* 2agc_A*
Probab=64.24 E-value=8.4 Score=30.49 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=38.2
Q ss_pred ceEEEeeEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEE
Q 029107 7 STVNIANVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLI 48 (199)
Q Consensus 7 s~V~i~~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKii 48 (199)
..+.|.+|.+..||..+..++.|.+.++..++|.+.+.+.|.
T Consensus 15 ~~~~i~~v~i~PdP~~~g~~~ti~~~~~l~~~i~~g~k~~v~ 56 (164)
T 2ag4_A 15 DPAVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLV 56 (164)
T ss_dssp CSEEEEEEEEESSSEEESEEEEEEEEEEESSCBCSSCEEEEE
T ss_pred ceEEEeEEEEeCCCCCCCCceEEEEEEEEeeccCCCCEEEEE
Confidence 368999999999999999999999999999999999877654
No 8
>3sb1_A Hydrogenase expression protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, HUPH, unkno function; HET: PGE; 1.67A {Thiobacillus denitrificans}
Probab=27.71 E-value=52 Score=26.63 Aligned_cols=26 Identities=15% Similarity=0.041 Sum_probs=20.1
Q ss_pred eEEEEEEecCCCCCCCeeEeeEEecceece
Q 029107 44 EWKLIYVGSAEDETYDQLLESVLVGPVNVG 73 (199)
Q Consensus 44 EWKiiYVGSa~s~~~DQ~Ldsv~VGPi~~G 73 (199)
-|.+.|..|.. .-+||.++||++|.-
T Consensus 113 VWrV~~~ns~~----~~ildtIEV~~vP~v 138 (160)
T 3sb1_A 113 VWWIIHRNAQG----AVTTQFIEVAFVPEL 138 (160)
T ss_dssp EEEEEEECTTS----CEEEEEEEESSSCGG
T ss_pred EEEEEEECCCC----CEEeeEEEEeCCCHH
Confidence 49999976632 348899999999853
No 9
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=27.33 E-value=1.8e+02 Score=21.19 Aligned_cols=68 Identities=15% Similarity=0.202 Sum_probs=50.7
Q ss_pred eEEEecCCCCCCCCeeEEEEEEEeCCCCCCceEEEEEEecCCCCCCCeeEeeEEecce-eceeEEEEEEeCCCCCC
Q 029107 13 NVTVLDNPAPFLSPFQFEISYECVTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPV-NVGNYRFVLQADPPDPS 87 (199)
Q Consensus 13 ~V~VlnNp~~f~~pf~FeItFEcle~L~~dlEWKiiYVGSa~s~~~DQ~Ldsv~VGPi-~~G~~kFvfeadpPd~~ 87 (199)
.|+++..+ ....|+..+|+|- .+|+..|+-=.+.|..+. ..+. -++.+|+| |.++.++.++.-|....
T Consensus 9 ~I~v~g~~-~v~~~l~v~vsf~--NPL~~~L~~c~~~vEG~G---L~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G 77 (102)
T 2xzz_A 9 SLTLLGAA-VVGQECEVQIVFK--NPLPVTLTNVVFRLEGSG---LQRP-KILNVGDIGGNETVTLRQSFVPVRPG 77 (102)
T ss_dssp EEEESSCC-CSSSCEEEEEEEE--CCSSSCBCSEEEEEEETT---TEEE-EEEEECCBCTTCEEEEEEEECCCSCS
T ss_pred EEEECCCc-ccCCeEEEEEEEE--CCCCCcccCEEEEEECCC---CCcc-eEEEcCcCCCCCEEEEEEEEecCccc
Confidence 56676554 6688888887775 999999999888888876 5555 55678999 45677888887776543
No 10
>3vhl_A Dedicator of cytokinesis protein 8; signal transduction, guanine nucleotide exchang factor, GTPA signaling protein; 2.08A {Mus musculus}
Probab=15.57 E-value=63 Score=27.83 Aligned_cols=12 Identities=33% Similarity=0.822 Sum_probs=9.8
Q ss_pred eEEEEEEEEeee
Q 029107 109 QEFVRVGYYVNN 120 (199)
Q Consensus 109 qEFiRVGYYVnn 120 (199)
-+|+|||||=..
T Consensus 14 ~~YFRV~FyG~~ 25 (288)
T 3vhl_A 14 GTYFRVGFYGSR 25 (288)
T ss_dssp CEEEEEEEESGG
T ss_pred ceeEEEEEECCC
Confidence 489999999754
Done!