STRING 9.05 
  emb2394 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
emb2394
emb2394 (embryo defective 2394); structural constituent of ribosome; embryo defective 2394 (emb2394); FUNCTIONS IN- structural constituent of ribosome; INVOLVED IN- embryonic development ending in seed dormancy, translation; LOCATED IN- chloroplast stroma, chloroplast, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Ribosomal protein L6 (InterPro-IPR000702), Ribosomal protein L6, conserved site-1 (InterPro-IPR002358); BEST Arabidopsis thaliana protein match is- ribosomal protein [...] (223 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT4G01310
ribosomal protein L5 family protein; ribosomal protein L5 family protein; FUNCTIONS IN- structu [...] (262 aa)
    0.999
AT1G48350
ribosomal protein L18 family protein; ribosomal protein L18 family protein; FUNCTIONS IN- struc [...] (170 aa)
    0.999
RPL3A
ribosomal protein L3 family protein; ribosomal protein L3 family protein; FUNCTIONS IN- structu [...] (271 aa)
    0.999
emb1473
emb1473 (embryo defective 1473); structural constituent of ribosome; embryo defective 1473 (emb [...] (241 aa)
   0.998
RPL4
RPL4; poly(U) binding / structural constituent of ribosome; encodes a plastid ribosomal protein [...] (282 aa)
    0.998
AT3G13120
30S ribosomal protein S10, chloroplast, putative; 30S ribosomal protein S10, chloroplast, putat [...] (191 aa)
     0.997
PRPL11
PRPL11 (PLASTID RIBOSOMAL PROTEIN L11); structural constituent of ribosome; mutant has Decrease [...] (222 aa)
    0.997
AT3G63490
ribosomal protein L1 family protein; ribosomal protein L1 family protein; FUNCTIONS IN- structu [...] (346 aa)
    0.997
AT2G33800
ribosomal protein S5 family protein; ribosomal protein S5 family protein; FUNCTIONS IN- structu [...] (303 aa)
     0.996
RPS13
30S ribosomal protein S13, chloroplast (CS13); 30S ribosomal protein S13, chloroplast (CS13); F [...] (169 aa)
     0.996
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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