Query 029118
Match_columns 198
No_of_seqs 184 out of 1124
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 07:46:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029118.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029118hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 CHL00194 ycf39 Ycf39; Provisio 99.8 1.8E-20 4E-25 163.5 11.7 96 100-195 1-113 (317)
2 KOG1502 Flavonol reductase/cin 99.8 1.8E-20 3.9E-25 169.1 10.7 99 98-196 5-133 (327)
3 PF13460 NAD_binding_10: NADH( 99.8 1.2E-19 2.7E-24 144.6 12.1 94 102-197 1-103 (183)
4 PF01073 3Beta_HSD: 3-beta hyd 99.8 7.6E-20 1.7E-24 159.8 10.3 95 103-197 1-121 (280)
5 PLN02214 cinnamoyl-CoA reducta 99.8 3.4E-18 7.4E-23 151.4 12.8 105 93-197 4-133 (342)
6 PRK15181 Vi polysaccharide bio 99.8 2.5E-18 5.4E-23 152.1 11.9 101 97-197 13-146 (348)
7 PLN02427 UDP-apiose/xylose syn 99.8 2.7E-18 5.8E-23 153.4 11.9 97 100-197 15-141 (386)
8 TIGR03649 ergot_EASG ergot alk 99.8 2.9E-18 6.2E-23 146.3 10.7 93 101-196 1-109 (285)
9 PLN02662 cinnamyl-alcohol dehy 99.7 7.3E-18 1.6E-22 145.0 10.7 98 98-195 3-130 (322)
10 PLN02695 GDP-D-mannose-3',5'-e 99.7 1.9E-17 4.1E-22 148.7 13.1 107 90-197 13-142 (370)
11 PLN00141 Tic62-NAD(P)-related 99.7 2.3E-17 4.9E-22 139.2 12.7 105 93-197 11-137 (251)
12 PLN02986 cinnamyl-alcohol dehy 99.7 1.7E-17 3.6E-22 143.9 11.8 99 98-196 4-132 (322)
13 PLN02650 dihydroflavonol-4-red 99.7 3.1E-17 6.7E-22 144.3 11.6 99 98-196 4-132 (351)
14 PRK11908 NAD-dependent epimera 99.7 4.3E-17 9.2E-22 143.2 11.6 98 99-197 1-123 (347)
15 TIGR01472 gmd GDP-mannose 4,6- 99.7 4.4E-17 9.4E-22 142.9 11.0 98 100-197 1-137 (343)
16 PLN00198 anthocyanidin reducta 99.7 6E-17 1.3E-21 141.5 11.6 99 99-197 9-136 (338)
17 TIGR03466 HpnA hopanoid-associ 99.7 9.3E-17 2E-21 137.3 11.7 98 100-197 1-118 (328)
18 PF05368 NmrA: NmrA-like famil 99.7 4.3E-17 9.3E-22 135.6 8.7 95 102-196 1-107 (233)
19 PLN02896 cinnamyl-alcohol dehy 99.7 1.3E-16 2.9E-21 140.7 12.0 102 96-197 7-143 (353)
20 COG0451 WcaG Nucleoside-diphos 99.7 1.4E-16 3E-21 135.1 11.6 96 101-197 2-121 (314)
21 PLN02583 cinnamoyl-CoA reducta 99.7 2.2E-16 4.8E-21 136.9 12.4 98 99-196 6-132 (297)
22 PLN02657 3,8-divinyl protochlo 99.7 2.4E-16 5.2E-21 143.2 12.4 102 96-197 57-187 (390)
23 PRK08125 bifunctional UDP-gluc 99.7 2.1E-16 4.6E-21 152.0 11.6 102 95-197 311-437 (660)
24 PLN02572 UDP-sulfoquinovose sy 99.7 4E-16 8.6E-21 144.2 12.4 102 96-197 44-196 (442)
25 PLN02686 cinnamoyl-CoA reducta 99.7 2.8E-16 6E-21 141.0 10.3 99 96-194 50-182 (367)
26 COG1087 GalE UDP-glucose 4-epi 99.7 5.2E-16 1.1E-20 139.4 11.0 98 100-197 1-123 (329)
27 PLN02989 cinnamyl-alcohol dehy 99.7 1.2E-15 2.6E-20 132.2 12.1 98 99-196 5-133 (325)
28 PF01370 Epimerase: NAD depend 99.7 4.3E-16 9.3E-21 127.0 8.6 96 102-197 1-121 (236)
29 PRK10675 UDP-galactose-4-epime 99.6 1.6E-15 3.4E-20 131.6 11.7 98 100-197 1-129 (338)
30 PLN00016 RNA-binding protein; 99.6 4.7E-16 1E-20 139.3 8.6 100 97-197 50-170 (378)
31 PLN02653 GDP-mannose 4,6-dehyd 99.6 1.6E-15 3.5E-20 132.7 11.2 100 98-197 5-144 (340)
32 PRK10217 dTDP-glucose 4,6-dehy 99.6 3.9E-15 8.5E-20 130.5 12.3 99 99-197 1-139 (355)
33 PRK09987 dTDP-4-dehydrorhamnos 99.6 2.2E-15 4.7E-20 131.0 10.2 85 100-197 1-109 (299)
34 TIGR02622 CDP_4_6_dhtase CDP-g 99.6 3.5E-15 7.6E-20 131.4 11.7 99 99-197 4-132 (349)
35 PLN02240 UDP-glucose 4-epimera 99.6 4.2E-15 9E-20 129.6 11.8 100 98-197 4-137 (352)
36 TIGR03589 PseB UDP-N-acetylglu 99.6 5E-15 1.1E-19 130.3 12.2 98 98-195 3-128 (324)
37 COG0702 Predicted nucleoside-d 99.6 3.9E-15 8.4E-20 124.0 10.5 96 100-196 1-111 (275)
38 PLN02206 UDP-glucuronate decar 99.6 4.6E-15 9.9E-20 137.5 11.0 95 97-197 117-238 (442)
39 PLN03209 translocon at the inn 99.6 7.6E-15 1.6E-19 141.0 11.1 98 99-196 80-212 (576)
40 PLN02260 probable rhamnose bio 99.6 1.1E-14 2.4E-19 139.6 11.9 99 99-197 6-137 (668)
41 PRK07201 short chain dehydroge 99.6 8.1E-15 1.7E-19 138.4 10.6 97 100-197 1-130 (657)
42 PLN02166 dTDP-glucose 4,6-dehy 99.6 7.3E-15 1.6E-19 136.0 10.1 95 97-197 118-239 (436)
43 TIGR01746 Thioester-redct thio 99.6 1.3E-14 2.8E-19 124.7 10.1 97 101-197 1-141 (367)
44 TIGR01181 dTDP_gluc_dehyt dTDP 99.6 2.4E-14 5.2E-19 121.3 11.1 97 101-197 1-130 (317)
45 KOG1430 C-3 sterol dehydrogena 99.6 2.2E-14 4.9E-19 131.2 11.2 100 97-197 2-131 (361)
46 PRK11150 rfaD ADP-L-glycero-D- 99.5 1.5E-14 3.3E-19 124.4 7.7 92 101-197 1-121 (308)
47 PRK10084 dTDP-glucose 4,6 dehy 99.5 4.7E-14 1E-18 123.5 10.9 98 100-197 1-138 (352)
48 TIGR01214 rmlD dTDP-4-dehydror 99.5 4.5E-14 9.8E-19 119.6 9.7 81 101-197 1-105 (287)
49 KOG1371 UDP-glucose 4-epimeras 99.5 5.6E-14 1.2E-18 127.2 9.8 100 99-198 2-134 (343)
50 PLN02996 fatty acyl-CoA reduct 99.5 8.6E-14 1.9E-18 130.6 11.4 101 97-197 9-166 (491)
51 TIGR01179 galE UDP-glucose-4-e 99.5 1.4E-13 3.1E-18 116.8 11.2 97 101-197 1-126 (328)
52 PLN02725 GDP-4-keto-6-deoxyman 99.5 6.4E-14 1.4E-18 119.2 8.5 81 103-197 1-106 (306)
53 PRK12320 hypothetical protein; 99.5 1.5E-13 3.2E-18 134.8 11.8 89 100-193 1-103 (699)
54 PRK09291 short chain dehydroge 99.5 2.3E-13 5E-18 113.1 11.3 97 99-195 2-135 (257)
55 PRK05865 hypothetical protein; 99.5 1.7E-13 3.7E-18 136.7 12.0 91 100-193 1-104 (854)
56 PRK06179 short chain dehydroge 99.5 2.4E-13 5.2E-18 114.5 11.0 96 99-196 4-136 (270)
57 PRK12429 3-hydroxybutyrate deh 99.5 3E-13 6.5E-18 111.9 11.1 98 99-196 4-144 (258)
58 TIGR02197 heptose_epim ADP-L-g 99.5 1.4E-13 3.1E-18 117.5 9.4 94 102-197 1-119 (314)
59 PRK06182 short chain dehydroge 99.5 2.6E-13 5.7E-18 114.9 10.5 97 99-195 3-136 (273)
60 PF07993 NAD_binding_4: Male s 99.5 1.7E-13 3.8E-18 116.3 7.8 90 104-193 1-136 (249)
61 PRK13394 3-hydroxybutyrate deh 99.5 5.8E-13 1.3E-17 110.7 10.8 99 97-195 5-147 (262)
62 TIGR01963 PHB_DH 3-hydroxybuty 99.4 7.2E-13 1.6E-17 109.5 11.0 97 100-196 2-141 (255)
63 PRK12828 short chain dehydroge 99.4 7.1E-13 1.5E-17 108.0 10.8 100 98-197 6-146 (239)
64 PRK06482 short chain dehydroge 99.4 4.9E-13 1.1E-17 113.2 9.9 96 100-195 3-138 (276)
65 TIGR01777 yfcH conserved hypot 99.4 3.6E-13 7.9E-18 113.3 8.8 91 102-197 1-117 (292)
66 PRK07231 fabG 3-ketoacyl-(acyl 99.4 6.3E-13 1.4E-17 109.6 10.0 100 98-197 4-146 (251)
67 PRK06180 short chain dehydroge 99.4 1E-12 2.3E-17 111.9 10.6 98 99-196 4-141 (277)
68 PRK12825 fabG 3-ketoacyl-(acyl 99.4 1.6E-12 3.4E-17 106.1 10.9 99 98-196 5-147 (249)
69 PRK06138 short chain dehydroge 99.4 1.7E-12 3.7E-17 107.3 10.8 98 98-195 4-143 (252)
70 PRK05993 short chain dehydroge 99.4 1E-12 2.2E-17 112.1 9.7 98 99-196 4-139 (277)
71 PRK08264 short chain dehydroge 99.4 3.3E-12 7.2E-17 105.2 12.2 98 98-196 5-137 (238)
72 PRK12826 3-ketoacyl-(acyl-carr 99.4 1.9E-12 4.2E-17 106.4 10.7 99 98-196 5-146 (251)
73 PRK05653 fabG 3-ketoacyl-(acyl 99.4 2.6E-12 5.5E-17 104.9 10.6 97 98-194 4-143 (246)
74 PLN02503 fatty acyl-CoA reduct 99.4 1.7E-12 3.7E-17 125.5 11.1 102 96-197 116-273 (605)
75 PRK09186 flagellin modificatio 99.4 2.7E-12 5.8E-17 106.6 10.8 98 98-195 3-148 (256)
76 PRK06194 hypothetical protein; 99.4 3.7E-12 8E-17 108.2 11.6 73 98-170 5-90 (287)
77 PRK10538 malonic semialdehyde 99.4 4.1E-12 8.9E-17 106.2 11.3 97 100-196 1-138 (248)
78 PRK06197 short chain dehydroge 99.4 3E-12 6.4E-17 110.8 10.6 102 94-195 11-155 (306)
79 PF02719 Polysacc_synt_2: Poly 99.4 1.4E-12 3.1E-17 116.5 8.8 95 102-196 1-132 (293)
80 PLN02778 3,5-epimerase/4-reduc 99.4 3.1E-12 6.7E-17 112.0 10.6 82 96-196 6-114 (298)
81 TIGR03206 benzo_BadH 2-hydroxy 99.4 4.2E-12 9.2E-17 104.8 10.8 99 98-196 2-143 (250)
82 PRK07577 short chain dehydroge 99.4 6.6E-12 1.4E-16 103.0 11.9 93 99-196 3-131 (234)
83 PRK07775 short chain dehydroge 99.4 5.2E-12 1.1E-16 107.7 11.6 103 94-196 5-150 (274)
84 PRK05557 fabG 3-ketoacyl-(acyl 99.4 8E-12 1.7E-16 102.1 11.9 97 98-194 4-144 (248)
85 PRK07326 short chain dehydroge 99.4 4.4E-12 9.5E-17 104.2 10.3 98 98-195 5-143 (237)
86 PRK07666 fabG 3-ketoacyl-(acyl 99.4 6.4E-12 1.4E-16 103.8 11.2 98 98-195 6-146 (239)
87 PRK08219 short chain dehydroge 99.4 3.3E-12 7.2E-17 103.8 9.3 71 99-170 3-78 (227)
88 PRK08263 short chain dehydroge 99.4 4.6E-12 1E-16 107.6 10.4 98 99-196 3-140 (275)
89 PRK07806 short chain dehydroge 99.4 8.1E-12 1.8E-16 103.5 11.6 98 98-195 5-138 (248)
90 PRK08063 enoyl-(acyl carrier p 99.4 6.3E-12 1.4E-16 104.0 10.8 98 99-196 4-145 (250)
91 PRK07454 short chain dehydroge 99.4 4.6E-12 1E-16 104.8 9.6 98 99-196 6-146 (241)
92 PRK12827 short chain dehydroge 99.3 1.5E-11 3.4E-16 101.0 12.0 99 98-196 5-151 (249)
93 PRK07023 short chain dehydroge 99.3 9.2E-12 2E-16 103.4 10.7 98 99-196 1-141 (243)
94 PRK08213 gluconate 5-dehydroge 99.3 8.9E-12 1.9E-16 104.4 10.6 101 96-196 9-153 (259)
95 PRK07825 short chain dehydroge 99.3 6.2E-12 1.3E-16 106.3 9.5 98 98-195 4-140 (273)
96 PRK08267 short chain dehydroge 99.3 8.4E-12 1.8E-16 104.6 10.0 96 99-194 1-138 (260)
97 PRK06914 short chain dehydroge 99.3 9.5E-12 2.1E-16 105.3 10.3 97 99-195 3-143 (280)
98 PRK07523 gluconate 5-dehydroge 99.3 1.2E-11 2.6E-16 103.3 10.8 100 96-195 7-149 (255)
99 PRK12746 short chain dehydroge 99.3 1.3E-11 2.8E-16 102.6 10.7 100 97-196 4-151 (254)
100 PRK08251 short chain dehydroge 99.3 1.5E-11 3.3E-16 101.9 11.0 97 99-195 2-143 (248)
101 PRK07774 short chain dehydroge 99.3 1.5E-11 3.2E-16 101.9 10.7 100 98-197 5-150 (250)
102 COG2910 Putative NADH-flavin r 99.3 1E-11 2.3E-16 105.6 9.9 91 100-192 1-105 (211)
103 PRK05565 fabG 3-ketoacyl-(acyl 99.3 1.1E-11 2.4E-16 101.7 9.8 99 97-195 3-145 (247)
104 PRK06196 oxidoreductase; Provi 99.3 1E-11 2.3E-16 108.2 10.2 98 97-194 24-158 (315)
105 PRK07102 short chain dehydroge 99.3 1.3E-11 2.9E-16 102.4 10.1 96 99-194 1-137 (243)
106 PRK06398 aldose dehydrogenase; 99.3 3.3E-11 7.3E-16 101.9 12.7 95 97-196 4-135 (258)
107 PRK05866 short chain dehydroge 99.3 2.1E-11 4.5E-16 106.0 11.6 101 96-196 37-182 (293)
108 PRK08017 oxidoreductase; Provi 99.3 1.5E-11 3.2E-16 102.2 10.0 96 100-195 3-136 (256)
109 PRK12823 benD 1,6-dihydroxycyc 99.3 2.3E-11 5E-16 101.7 11.1 100 97-196 6-148 (260)
110 PRK05650 short chain dehydroge 99.3 2.4E-11 5.2E-16 102.8 11.1 97 100-196 1-140 (270)
111 PLN02260 probable rhamnose bio 99.3 2.9E-11 6.2E-16 116.1 12.6 82 96-196 377-485 (668)
112 PRK07814 short chain dehydroge 99.3 3.6E-11 7.9E-16 101.5 11.5 99 97-195 8-150 (263)
113 PRK07856 short chain dehydroge 99.3 3.8E-11 8.3E-16 100.4 11.6 71 98-170 5-82 (252)
114 PRK07074 short chain dehydroge 99.3 2.1E-11 4.6E-16 101.8 9.9 96 99-194 2-138 (257)
115 PRK12936 3-ketoacyl-(acyl-carr 99.3 4.1E-11 8.9E-16 98.4 11.5 99 97-195 4-142 (245)
116 PRK12829 short chain dehydroge 99.3 2E-11 4.4E-16 101.5 9.7 75 96-170 8-93 (264)
117 PRK07024 short chain dehydroge 99.3 2.1E-11 4.5E-16 102.4 9.9 97 99-195 2-141 (257)
118 COG1088 RfbB dTDP-D-glucose 4, 99.3 2.1E-11 4.5E-16 110.0 10.4 98 100-197 1-131 (340)
119 COG1086 Predicted nucleoside-d 99.3 1.7E-11 3.8E-16 117.5 10.5 98 96-193 247-377 (588)
120 COG3320 Putative dehydrogenase 99.3 2.2E-11 4.8E-16 112.1 10.7 98 100-197 1-140 (382)
121 PRK12939 short chain dehydroge 99.3 5.2E-11 1.1E-15 98.1 11.4 73 98-170 6-91 (250)
122 TIGR01829 AcAcCoA_reduct aceto 99.3 3.7E-11 8.1E-16 98.5 10.3 95 100-194 1-139 (242)
123 PRK07063 short chain dehydroge 99.3 5.5E-11 1.2E-15 99.6 11.4 100 97-196 5-149 (260)
124 PRK12824 acetoacetyl-CoA reduc 99.3 5.7E-11 1.2E-15 97.6 11.3 97 100-196 3-143 (245)
125 PRK05875 short chain dehydroge 99.3 4.7E-11 1E-15 100.9 11.0 99 98-196 6-150 (276)
126 PRK07060 short chain dehydroge 99.3 2.9E-11 6.2E-16 99.6 9.5 73 98-170 8-84 (245)
127 PRK07890 short chain dehydroge 99.3 3.4E-11 7.3E-16 100.1 9.9 73 98-170 4-89 (258)
128 PRK06523 short chain dehydroge 99.3 9.1E-11 2E-15 98.1 12.5 98 96-196 6-142 (260)
129 PRK08220 2,3-dihydroxybenzoate 99.3 8.3E-11 1.8E-15 97.5 12.0 96 97-195 6-138 (252)
130 TIGR03443 alpha_am_amid L-amin 99.3 3.7E-11 8.1E-16 122.4 11.7 99 99-197 971-1114(1389)
131 PRK08339 short chain dehydroge 99.2 6.8E-11 1.5E-15 100.6 11.3 100 97-196 6-148 (263)
132 PRK06935 2-deoxy-D-gluconate 3 99.2 9.7E-11 2.1E-15 98.2 12.1 102 95-196 11-154 (258)
133 PRK07453 protochlorophyllide o 99.2 5.1E-11 1.1E-15 104.0 10.8 73 98-170 5-90 (322)
134 PRK06124 gluconate 5-dehydroge 99.2 6.7E-11 1.5E-15 98.7 10.8 100 96-195 8-150 (256)
135 PRK05693 short chain dehydroge 99.2 6.8E-11 1.5E-15 100.2 11.0 72 99-170 1-79 (274)
136 KOG1203 Predicted dehydrogenas 99.2 3.8E-11 8.3E-16 111.7 10.2 102 94-195 74-204 (411)
137 PRK06841 short chain dehydroge 99.2 1E-10 2.2E-15 97.3 11.8 99 97-195 13-151 (255)
138 PRK06181 short chain dehydroge 99.2 7.5E-11 1.6E-15 98.8 10.9 71 100-170 2-85 (263)
139 PRK05717 oxidoreductase; Valid 99.2 8.2E-11 1.8E-15 98.5 11.0 75 96-170 7-91 (255)
140 PRK07109 short chain dehydroge 99.2 6.9E-11 1.5E-15 105.0 11.1 101 97-197 6-149 (334)
141 PRK07478 short chain dehydroge 99.2 8.4E-11 1.8E-15 98.2 10.9 99 98-196 5-147 (254)
142 TIGR01832 kduD 2-deoxy-D-gluco 99.2 1E-10 2.2E-15 97.0 11.1 74 97-170 3-87 (248)
143 PRK08628 short chain dehydroge 99.2 1.1E-10 2.3E-15 97.6 11.4 74 97-170 5-90 (258)
144 PRK06172 short chain dehydroge 99.2 7.4E-11 1.6E-15 98.2 10.3 100 97-196 5-148 (253)
145 PRK12745 3-ketoacyl-(acyl-carr 99.2 1.2E-10 2.7E-15 96.6 11.5 72 99-170 2-87 (256)
146 KOG1429 dTDP-glucose 4-6-dehyd 99.2 2.8E-11 6.1E-16 108.8 7.8 101 90-197 19-146 (350)
147 PRK07904 short chain dehydroge 99.2 1.5E-10 3.2E-15 98.2 11.8 98 98-195 7-149 (253)
148 PRK07069 short chain dehydroge 99.2 1.1E-10 2.5E-15 96.4 10.7 96 101-196 1-142 (251)
149 PRK09072 short chain dehydroge 99.2 8.9E-11 1.9E-15 98.7 9.9 73 98-170 4-87 (263)
150 PRK08277 D-mannonate oxidoredu 99.2 1.4E-10 3.1E-15 98.2 11.2 73 98-170 9-94 (278)
151 TIGR01830 3oxo_ACP_reduc 3-oxo 99.2 1.1E-10 2.4E-15 95.4 9.9 94 102-195 1-138 (239)
152 PRK07041 short chain dehydroge 99.2 7.5E-11 1.6E-15 96.7 9.0 95 103-197 1-129 (230)
153 PRK08085 gluconate 5-dehydroge 99.2 1.6E-10 3.5E-15 96.5 10.7 99 97-195 7-148 (254)
154 PRK05876 short chain dehydroge 99.2 1.4E-10 3E-15 99.7 10.6 74 97-170 4-90 (275)
155 PRK12938 acetyacetyl-CoA reduc 99.2 2.4E-10 5.2E-15 94.6 11.5 97 99-195 3-143 (246)
156 PRK06463 fabG 3-ketoacyl-(acyl 99.2 1.6E-10 3.5E-15 96.7 10.6 99 98-196 6-142 (255)
157 PF04321 RmlD_sub_bind: RmlD s 99.2 4.1E-11 8.8E-16 104.7 7.2 81 100-196 1-105 (286)
158 PRK09242 tropinone reductase; 99.2 1.8E-10 3.9E-15 96.3 10.6 100 97-196 7-151 (257)
159 PRK07067 sorbitol dehydrogenas 99.2 1.2E-10 2.6E-15 97.4 9.3 73 98-170 5-87 (257)
160 PRK12935 acetoacetyl-CoA reduc 99.2 2.3E-10 5E-15 94.8 10.8 98 98-195 5-146 (247)
161 PRK08643 acetoin reductase; Va 99.2 2E-10 4.3E-15 95.8 10.4 72 99-170 2-86 (256)
162 PRK12937 short chain dehydroge 99.2 3.2E-10 7E-15 93.4 11.4 73 98-170 4-90 (245)
163 PRK06949 short chain dehydroge 99.2 2E-10 4.4E-15 95.5 10.2 75 96-170 6-93 (258)
164 PRK07097 gluconate 5-dehydroge 99.2 2.8E-10 6.1E-15 96.0 11.0 97 98-194 9-148 (265)
165 PRK07062 short chain dehydroge 99.2 2.6E-10 5.7E-15 95.8 10.6 100 97-196 6-150 (265)
166 PRK08589 short chain dehydroge 99.2 4.3E-10 9.4E-15 95.8 11.8 98 97-196 4-145 (272)
167 PLN02253 xanthoxin dehydrogena 99.2 3.6E-10 7.8E-15 95.9 11.2 75 96-170 15-101 (280)
168 PRK06114 short chain dehydroge 99.2 3.6E-10 7.8E-15 94.8 11.0 99 97-195 6-148 (254)
169 PRK06550 fabG 3-ketoacyl-(acyl 99.1 5.5E-10 1.2E-14 91.9 11.8 71 97-170 3-74 (235)
170 PRK07035 short chain dehydroge 99.1 4.7E-10 1E-14 93.4 11.3 99 97-195 6-148 (252)
171 smart00822 PKS_KR This enzymat 99.1 3.6E-10 7.7E-15 86.4 9.6 96 100-195 1-139 (180)
172 PRK07201 short chain dehydroge 99.1 3.1E-10 6.7E-15 107.4 11.1 100 98-197 370-514 (657)
173 PRK06077 fabG 3-ketoacyl-(acyl 99.1 5.6E-10 1.2E-14 92.3 11.2 72 99-170 6-91 (252)
174 PRK09730 putative NAD(P)-bindi 99.1 1.8E-10 3.9E-15 94.7 8.1 72 99-170 1-86 (247)
175 PRK06101 short chain dehydroge 99.1 2.9E-10 6.3E-15 94.8 9.4 71 100-170 2-78 (240)
176 PRK08265 short chain dehydroge 99.1 4.3E-10 9.2E-15 95.1 10.5 74 97-170 4-87 (261)
177 TIGR02415 23BDH acetoin reduct 99.1 4.1E-10 8.8E-15 93.4 10.0 71 100-170 1-84 (254)
178 PRK06924 short chain dehydroge 99.1 4.1E-10 8.8E-15 93.5 10.0 65 99-163 1-69 (251)
179 PRK08309 short chain dehydroge 99.1 3.1E-10 6.6E-15 94.0 9.2 90 100-190 1-110 (177)
180 PRK08226 short chain dehydroge 99.1 5.6E-10 1.2E-14 93.5 10.9 98 98-195 5-144 (263)
181 PRK06953 short chain dehydroge 99.1 6.1E-10 1.3E-14 91.6 10.9 72 99-170 1-77 (222)
182 PRK09134 short chain dehydroge 99.1 6.7E-10 1.4E-14 93.2 11.3 74 97-170 7-94 (258)
183 PRK06171 sorbitol-6-phosphate 99.1 1E-09 2.2E-14 92.3 12.3 73 95-170 5-84 (266)
184 PRK07576 short chain dehydroge 99.1 4.9E-10 1.1E-14 95.1 10.3 74 97-170 7-93 (264)
185 PRK12384 sorbitol-6-phosphate 99.1 7.3E-10 1.6E-14 92.6 11.2 72 99-170 2-88 (259)
186 PRK06500 short chain dehydroge 99.1 6.1E-10 1.3E-14 91.9 10.6 73 98-170 5-87 (249)
187 PRK06701 short chain dehydroge 99.1 9.3E-10 2E-14 95.4 11.9 75 96-170 43-131 (290)
188 PRK06198 short chain dehydroge 99.1 1.1E-09 2.3E-14 91.4 11.9 74 97-170 4-91 (260)
189 PRK12743 oxidoreductase; Provi 99.1 5.9E-10 1.3E-14 93.6 10.3 72 99-170 2-87 (256)
190 PRK05855 short chain dehydroge 99.1 5.9E-10 1.3E-14 102.2 11.0 100 98-197 314-457 (582)
191 PRK08642 fabG 3-ketoacyl-(acyl 99.1 8.7E-10 1.9E-14 91.2 11.0 73 98-170 4-88 (253)
192 PRK08945 putative oxoacyl-(acy 99.1 9.5E-10 2.1E-14 91.5 11.2 100 96-195 9-155 (247)
193 PRK06128 oxidoreductase; Provi 99.1 1.2E-09 2.5E-14 94.7 12.2 102 96-197 52-197 (300)
194 PRK05854 short chain dehydroge 99.1 6.1E-10 1.3E-14 97.7 10.5 76 95-170 10-100 (313)
195 PRK06057 short chain dehydroge 99.1 6.2E-10 1.4E-14 93.2 10.1 74 97-170 5-86 (255)
196 PRK06200 2,3-dihydroxy-2,3-dih 99.1 8.2E-10 1.8E-14 92.9 10.7 73 98-170 5-87 (263)
197 PRK05867 short chain dehydroge 99.1 1E-09 2.2E-14 91.8 11.0 74 97-170 7-93 (253)
198 PRK06139 short chain dehydroge 99.1 1E-09 2.2E-14 98.0 11.4 99 98-196 6-147 (330)
199 PRK09135 pteridine reductase; 99.1 4.2E-10 9E-15 92.5 7.9 72 99-170 6-92 (249)
200 PRK06113 7-alpha-hydroxysteroi 99.1 1.1E-09 2.5E-14 91.6 10.7 99 97-195 9-149 (255)
201 PRK12481 2-deoxy-D-gluconate 3 99.1 1.5E-09 3.2E-14 91.5 11.1 74 97-170 6-90 (251)
202 PRK07985 oxidoreductase; Provi 99.1 3E-09 6.5E-14 92.4 13.4 74 97-170 47-135 (294)
203 TIGR03325 BphB_TodD cis-2,3-di 99.1 1.6E-09 3.4E-14 91.3 11.3 73 98-170 4-86 (262)
204 PRK05786 fabG 3-ketoacyl-(acyl 99.1 7.8E-10 1.7E-14 90.9 8.9 73 98-170 4-88 (238)
205 PRK08340 glucose-1-dehydrogena 99.0 1.4E-09 3.1E-14 91.4 10.3 71 100-170 1-83 (259)
206 COG1090 Predicted nucleoside-d 99.0 6.3E-10 1.4E-14 99.4 8.4 89 102-197 1-116 (297)
207 PRK06483 dihydromonapterin red 99.0 1.8E-09 4E-14 89.2 10.1 72 99-170 2-81 (236)
208 PRK07677 short chain dehydroge 99.0 2.3E-09 5E-14 89.6 10.6 72 99-170 1-85 (252)
209 PRK08324 short chain dehydroge 99.0 1.4E-09 3.1E-14 105.4 10.5 99 98-196 421-562 (681)
210 PRK08278 short chain dehydroge 99.0 4.9E-09 1.1E-13 89.5 12.5 73 98-170 5-97 (273)
211 PRK06123 short chain dehydroge 99.0 2.1E-09 4.5E-14 88.9 9.8 72 99-170 2-87 (248)
212 PRK12748 3-ketoacyl-(acyl-carr 99.0 2.9E-09 6.4E-14 89.2 10.6 100 98-197 4-159 (256)
213 PRK06947 glucose-1-dehydrogena 99.0 2.8E-09 6.1E-14 88.3 10.0 72 99-170 2-87 (248)
214 PRK08936 glucose-1-dehydrogena 99.0 6.3E-09 1.4E-13 87.4 12.2 74 97-170 5-92 (261)
215 PRK08416 7-alpha-hydroxysteroi 99.0 4.1E-09 8.9E-14 88.9 10.9 74 97-170 6-94 (260)
216 PRK08993 2-deoxy-D-gluconate 3 99.0 5.6E-09 1.2E-13 87.7 11.6 74 97-170 8-92 (253)
217 KOG4039 Serine/threonine kinas 99.0 2.1E-09 4.6E-14 91.8 9.0 101 95-196 14-135 (238)
218 PRK05872 short chain dehydroge 99.0 4.2E-09 9.1E-14 91.3 11.0 74 97-170 7-92 (296)
219 COG0300 DltE Short-chain dehyd 99.0 4.5E-09 9.8E-14 93.0 10.9 100 97-196 4-147 (265)
220 PRK12742 oxidoreductase; Provi 99.0 3.3E-09 7.1E-14 87.2 9.2 73 98-170 5-82 (237)
221 TIGR01831 fabG_rel 3-oxoacyl-( 99.0 3.8E-09 8.2E-14 87.1 9.5 69 102-170 1-83 (239)
222 PRK07832 short chain dehydroge 99.0 4.3E-09 9.3E-14 89.3 10.1 71 100-170 1-85 (272)
223 TIGR01289 LPOR light-dependent 99.0 7.4E-09 1.6E-13 90.9 11.8 72 99-170 3-88 (314)
224 PRK12747 short chain dehydroge 99.0 6.8E-09 1.5E-13 86.6 10.9 72 99-170 4-95 (252)
225 PRK08217 fabG 3-ketoacyl-(acyl 99.0 6.6E-09 1.4E-13 85.6 10.4 74 97-170 3-89 (253)
226 PRK09009 C factor cell-cell si 98.9 8.9E-09 1.9E-13 84.9 11.0 69 100-170 1-74 (235)
227 PRK08177 short chain dehydroge 98.9 3E-09 6.4E-14 87.7 8.0 72 99-170 1-78 (225)
228 PRK06125 short chain dehydroge 98.9 1.1E-08 2.3E-13 85.9 11.2 73 98-170 6-88 (259)
229 TIGR02632 RhaD_aldol-ADH rhamn 98.9 5.6E-09 1.2E-13 101.7 10.4 73 98-170 413-500 (676)
230 COG4221 Short-chain alcohol de 98.9 1.4E-08 3E-13 89.1 11.6 98 97-194 4-142 (246)
231 PRK08703 short chain dehydroge 98.9 1.7E-08 3.7E-13 83.6 11.4 74 97-170 4-94 (239)
232 PRK06484 short chain dehydroge 98.9 1.3E-08 2.8E-13 94.0 11.4 75 96-170 266-350 (520)
233 PRK07831 short chain dehydroge 98.9 2.1E-08 4.6E-13 84.3 11.4 73 98-170 16-104 (262)
234 PRK07792 fabG 3-ketoacyl-(acyl 98.9 1.2E-08 2.5E-13 89.2 10.2 74 97-170 10-96 (306)
235 PRK12367 short chain dehydroge 98.9 9.3E-09 2E-13 87.9 8.7 75 96-170 11-86 (245)
236 PF00106 adh_short: short chai 98.8 1.8E-08 3.9E-13 78.5 9.0 97 100-196 1-139 (167)
237 COG1091 RfbD dTDP-4-dehydrorha 98.8 1.2E-08 2.6E-13 91.0 8.8 80 100-196 1-104 (281)
238 KOG2865 NADH:ubiquinone oxidor 98.8 8.7E-09 1.9E-13 93.3 7.9 97 99-195 61-180 (391)
239 PRK06484 short chain dehydroge 98.8 2.8E-08 6E-13 91.8 11.3 74 97-170 3-86 (520)
240 PRK05884 short chain dehydroge 98.8 6.6E-09 1.4E-13 86.6 6.4 71 100-170 1-76 (223)
241 PLN02780 ketoreductase/ oxidor 98.8 2.9E-08 6.2E-13 88.1 10.7 98 99-196 53-197 (320)
242 PF08659 KR: KR domain; Inter 98.8 3.1E-08 6.8E-13 80.9 10.1 94 101-194 2-138 (181)
243 PRK12744 short chain dehydroge 98.8 2.7E-08 5.9E-13 83.4 9.3 73 98-170 7-96 (257)
244 PRK07424 bifunctional sterol d 98.8 1.7E-08 3.7E-13 93.6 8.8 73 98-170 177-252 (406)
245 PRK08261 fabG 3-ketoacyl-(acyl 98.8 3.3E-08 7.2E-13 90.3 10.5 74 97-170 208-291 (450)
246 PLN00015 protochlorophyllide r 98.8 3.4E-08 7.3E-13 86.2 9.9 93 103-195 1-140 (308)
247 PRK12859 3-ketoacyl-(acyl-carr 98.8 5.3E-08 1.1E-12 82.1 10.8 100 97-196 4-159 (256)
248 PRK06940 short chain dehydroge 98.8 4.6E-08 9.9E-13 84.0 10.3 70 99-170 2-83 (275)
249 PRK07578 short chain dehydroge 98.8 9.6E-08 2.1E-12 77.3 11.1 59 100-170 1-62 (199)
250 KOG1205 Predicted dehydrogenas 98.8 6.3E-08 1.4E-12 86.5 10.8 101 94-194 7-152 (282)
251 PRK07791 short chain dehydroge 98.7 1.2E-07 2.6E-12 81.9 11.8 74 97-170 4-99 (286)
252 PRK08862 short chain dehydroge 98.7 2E-07 4.3E-12 78.5 11.2 74 97-170 3-90 (227)
253 TIGR02685 pter_reduc_Leis pter 98.7 4.7E-08 1E-12 82.7 7.3 71 100-170 2-91 (267)
254 TIGR01500 sepiapter_red sepiap 98.7 1.2E-07 2.5E-12 79.9 9.6 62 101-162 2-75 (256)
255 PRK05599 hypothetical protein; 98.7 2.4E-07 5.3E-12 77.9 11.2 70 100-170 1-84 (246)
256 COG1748 LYS9 Saccharopine dehy 98.6 1.3E-07 2.9E-12 87.7 9.0 87 99-186 1-95 (389)
257 COG1089 Gmd GDP-D-mannose dehy 98.6 1.6E-07 3.5E-12 84.8 9.1 99 99-197 2-136 (345)
258 PF03435 Saccharop_dh: Sacchar 98.6 1.3E-07 2.9E-12 85.2 8.4 86 102-189 1-96 (386)
259 TIGR00715 precor6x_red precorr 98.6 4.2E-07 9E-12 79.8 10.2 89 100-189 1-98 (256)
260 KOG1208 Dehydrogenases with di 98.5 5.4E-07 1.2E-11 81.2 10.2 98 97-194 33-173 (314)
261 PRK08415 enoyl-(acyl carrier p 98.5 1.1E-06 2.4E-11 75.9 10.9 72 98-170 4-90 (274)
262 cd01078 NAD_bind_H4MPT_DH NADP 98.5 3.1E-07 6.7E-12 75.6 6.6 74 97-170 26-104 (194)
263 PTZ00325 malate dehydrogenase; 98.5 7.7E-07 1.7E-11 80.4 9.6 99 97-195 6-128 (321)
264 PRK07370 enoyl-(acyl carrier p 98.5 2.8E-06 6E-11 72.2 11.9 73 98-170 5-94 (258)
265 PRK06079 enoyl-(acyl carrier p 98.4 8.5E-07 1.8E-11 74.9 8.0 73 98-170 6-90 (252)
266 PRK14874 aspartate-semialdehyd 98.4 2.3E-06 4.9E-11 77.1 10.5 88 99-192 1-95 (334)
267 PRK09496 trkA potassium transp 98.4 1.9E-06 4.1E-11 78.5 9.7 90 100-190 1-98 (453)
268 KOG0747 Putative NAD+-dependen 98.4 8.3E-07 1.8E-11 80.1 7.0 98 100-197 7-137 (331)
269 PRK07889 enoyl-(acyl carrier p 98.4 1.4E-06 3.1E-11 73.9 8.0 74 97-170 5-92 (256)
270 PRK08303 short chain dehydroge 98.4 2.1E-06 4.5E-11 75.7 9.1 74 97-170 6-102 (305)
271 PLN00106 malate dehydrogenase 98.3 2.9E-06 6.4E-11 76.7 9.8 99 97-195 16-138 (323)
272 PRK06720 hypothetical protein; 98.3 2.6E-06 5.6E-11 69.8 8.6 74 97-170 14-100 (169)
273 PRK08594 enoyl-(acyl carrier p 98.3 2.9E-06 6.3E-11 72.2 8.8 73 98-170 6-94 (257)
274 cd01336 MDH_cytoplasmic_cytoso 98.3 1.3E-06 2.8E-11 78.7 6.7 70 100-170 3-85 (325)
275 PLN02968 Probable N-acetyl-gam 98.3 1.9E-06 4.1E-11 79.5 7.7 95 98-194 37-137 (381)
276 PRK09620 hypothetical protein; 98.3 3.3E-06 7.2E-11 72.9 7.7 73 98-170 2-94 (229)
277 PF02254 TrkA_N: TrkA-N domain 98.2 8.5E-06 1.8E-10 61.0 8.8 68 102-170 1-69 (116)
278 PRK06732 phosphopantothenate-- 98.2 4.7E-06 1E-10 71.6 8.0 65 105-170 22-88 (229)
279 PRK06505 enoyl-(acyl carrier p 98.2 5E-06 1.1E-10 71.5 8.1 73 97-170 5-92 (271)
280 TIGR02813 omega_3_PfaA polyket 98.2 7.6E-06 1.6E-10 90.2 11.1 98 98-195 1996-2179(2582)
281 PRK07533 enoyl-(acyl carrier p 98.2 6.4E-06 1.4E-10 69.8 8.4 74 97-170 8-95 (258)
282 PRK07984 enoyl-(acyl carrier p 98.1 1E-05 2.2E-10 69.5 8.2 73 98-170 5-91 (262)
283 KOG1221 Acyl-CoA reductase [Li 98.1 1.1E-05 2.4E-10 76.6 9.2 100 96-195 9-158 (467)
284 COG0569 TrkA K+ transport syst 98.1 1.8E-05 3.9E-10 67.8 9.6 90 100-190 1-99 (225)
285 PRK08690 enoyl-(acyl carrier p 98.1 1.1E-05 2.4E-10 68.5 8.1 74 97-170 4-91 (261)
286 PRK05671 aspartate-semialdehyd 98.1 1.4E-05 3.1E-10 72.6 8.7 88 99-192 4-98 (336)
287 PRK14982 acyl-ACP reductase; P 98.1 3.4E-06 7.3E-11 77.1 4.7 69 96-170 152-222 (340)
288 PRK09496 trkA potassium transp 98.1 2.6E-05 5.6E-10 71.1 9.9 95 97-192 229-331 (453)
289 KOG4288 Predicted oxidoreducta 98.1 2.2E-06 4.7E-11 75.8 2.6 95 99-193 52-163 (283)
290 TIGR01296 asd_B aspartate-semi 98.1 2.1E-05 4.5E-10 71.3 9.0 86 101-192 1-93 (339)
291 PRK06603 enoyl-(acyl carrier p 98.1 1.4E-05 3.1E-10 67.9 7.5 72 98-170 7-93 (260)
292 KOG1610 Corticosteroid 11-beta 98.0 4.2E-05 9.2E-10 69.6 10.8 76 95-170 25-113 (322)
293 COG1028 FabG Dehydrogenases wi 98.0 2.9E-05 6.4E-10 64.4 9.0 74 97-170 3-93 (251)
294 PRK08159 enoyl-(acyl carrier p 98.0 2E-05 4.3E-10 67.8 8.1 71 99-170 10-95 (272)
295 PRK06997 enoyl-(acyl carrier p 98.0 1.2E-05 2.5E-10 68.5 6.3 72 98-170 5-91 (260)
296 PRK05086 malate dehydrogenase; 98.0 3.8E-05 8.2E-10 68.9 9.6 92 100-193 1-119 (312)
297 PLN02819 lysine-ketoglutarate 98.0 3.1E-05 6.7E-10 79.6 9.6 98 92-191 562-679 (1042)
298 PF01118 Semialdhyde_dh: Semia 97.9 0.00013 2.9E-09 56.2 10.2 86 101-192 1-98 (121)
299 PRK10669 putative cation:proto 97.9 7.5E-05 1.6E-09 71.1 10.1 71 99-170 417-488 (558)
300 KOG1431 GDP-L-fucose synthetas 97.9 4E-05 8.6E-10 68.1 6.8 85 99-197 1-112 (315)
301 PRK00436 argC N-acetyl-gamma-g 97.9 6.5E-05 1.4E-09 68.0 8.5 91 99-192 2-100 (343)
302 PRK03659 glutathione-regulated 97.9 8.3E-05 1.8E-09 72.0 9.7 71 99-170 400-471 (601)
303 PLN02730 enoyl-[acyl-carrier-p 97.9 0.00015 3.3E-09 64.6 10.7 35 97-132 7-43 (303)
304 TIGR01850 argC N-acetyl-gamma- 97.8 6.5E-05 1.4E-09 68.2 8.1 90 100-192 1-100 (346)
305 KOG1210 Predicted 3-ketosphing 97.8 0.00013 2.7E-09 66.7 8.9 73 98-170 32-119 (331)
306 KOG2733 Uncharacterized membra 97.8 3.8E-05 8.1E-10 71.4 5.3 88 99-187 5-113 (423)
307 KOG0725 Reductases with broad 97.7 0.0005 1.1E-08 60.5 11.6 75 96-170 5-96 (270)
308 KOG1201 Hydroxysteroid 17-beta 97.7 0.00045 9.8E-09 62.5 11.3 98 96-194 35-175 (300)
309 PLN02383 aspartate semialdehyd 97.7 0.00035 7.7E-09 63.7 10.6 87 98-192 6-101 (344)
310 PRK08664 aspartate-semialdehyd 97.7 0.00021 4.5E-09 64.7 9.0 89 99-191 3-108 (349)
311 PRK12548 shikimate 5-dehydroge 97.7 0.00017 3.6E-09 63.8 8.1 73 97-170 124-206 (289)
312 COG3967 DltE Short-chain dehyd 97.6 0.00035 7.6E-09 61.1 8.9 73 98-170 4-85 (245)
313 KOG1372 GDP-mannose 4,6 dehydr 97.6 0.00031 6.8E-09 63.2 8.1 100 97-196 26-164 (376)
314 PRK06129 3-hydroxyacyl-CoA deh 97.6 0.00011 2.5E-09 64.8 5.4 97 99-196 2-121 (308)
315 PRK12428 3-alpha-hydroxysteroi 97.6 0.00017 3.7E-09 60.5 6.0 77 115-196 1-101 (241)
316 PRK05579 bifunctional phosphop 97.6 0.00032 6.9E-09 65.3 8.3 69 97-170 186-274 (399)
317 PRK00048 dihydrodipicolinate r 97.5 0.00096 2.1E-08 58.0 9.6 82 100-188 2-89 (257)
318 TIGR02853 spore_dpaA dipicolin 97.4 0.00062 1.3E-08 60.5 8.4 94 96-195 148-267 (287)
319 KOG1207 Diacetyl reductase/L-x 97.4 0.00029 6.2E-09 60.7 5.8 70 95-164 3-75 (245)
320 PRK13656 trans-2-enoyl-CoA red 97.4 0.00075 1.6E-08 63.2 8.9 72 98-170 40-138 (398)
321 PRK14106 murD UDP-N-acetylmura 97.4 0.00071 1.5E-08 62.0 8.5 81 98-184 4-93 (450)
322 cd00704 MDH Malate dehydrogena 97.4 0.00045 9.7E-09 62.5 6.9 64 101-170 2-83 (323)
323 PRK03562 glutathione-regulated 97.4 0.00085 1.8E-08 65.4 9.3 71 99-170 400-471 (621)
324 COG3268 Uncharacterized conser 97.4 0.00029 6.4E-09 65.0 5.6 85 99-185 6-99 (382)
325 PF01113 DapB_N: Dihydrodipico 97.4 0.00066 1.4E-08 52.9 6.8 85 100-191 1-99 (124)
326 TIGR00978 asd_EA aspartate-sem 97.3 0.00072 1.6E-08 61.1 7.3 87 100-192 1-105 (341)
327 KOG1611 Predicted short chain- 97.2 0.002 4.3E-08 56.8 8.5 63 100-162 4-74 (249)
328 PRK12475 thiamine/molybdopteri 97.2 0.0022 4.7E-08 58.4 9.1 99 95-196 20-153 (338)
329 PRK10537 voltage-gated potassi 97.2 0.0036 7.8E-08 58.2 10.5 69 99-170 240-309 (393)
330 PF01488 Shikimate_DH: Shikima 97.2 0.00054 1.2E-08 53.9 4.4 71 94-170 7-82 (135)
331 TIGR01915 npdG NADPH-dependent 97.2 0.00043 9.3E-09 58.3 4.0 65 100-170 1-75 (219)
332 TIGR01758 MDH_euk_cyt malate d 97.2 0.001 2.2E-08 60.1 6.6 64 101-170 1-82 (324)
333 PF13561 adh_short_C2: Enoyl-( 97.1 0.00071 1.5E-08 56.4 5.1 65 106-170 1-80 (241)
334 KOG1014 17 beta-hydroxysteroid 97.1 0.00099 2.1E-08 60.6 6.1 69 100-168 50-129 (312)
335 PRK04148 hypothetical protein; 97.1 0.0023 5E-08 51.7 7.5 88 98-189 16-108 (134)
336 KOG1200 Mitochondrial/plastidi 97.1 0.0035 7.6E-08 54.8 9.0 74 97-170 12-97 (256)
337 PRK08057 cobalt-precorrin-6x r 97.1 0.006 1.3E-07 53.5 10.6 89 99-190 2-99 (248)
338 cd08259 Zn_ADH5 Alcohol dehydr 97.1 0.0033 7.2E-08 53.6 8.8 91 98-193 162-258 (332)
339 PRK06300 enoyl-(acyl carrier p 97.1 0.0079 1.7E-07 53.5 11.4 37 96-132 5-43 (299)
340 PRK06019 phosphoribosylaminoim 97.0 0.0031 6.7E-08 57.3 8.3 68 99-169 2-69 (372)
341 cd01065 NAD_bind_Shikimate_DH 97.0 0.0011 2.4E-08 51.8 4.5 69 98-170 18-88 (155)
342 PRK07688 thiamine/molybdopteri 97.0 0.007 1.5E-07 55.1 10.3 99 95-196 20-153 (339)
343 TIGR00518 alaDH alanine dehydr 96.9 0.0025 5.4E-08 58.5 7.1 72 98-170 166-237 (370)
344 PF03446 NAD_binding_2: NAD bi 96.9 0.0011 2.4E-08 53.4 4.1 64 99-170 1-64 (163)
345 PRK06728 aspartate-semialdehyd 96.9 0.011 2.3E-07 54.5 10.8 80 98-183 4-92 (347)
346 PRK06598 aspartate-semialdehyd 96.9 0.0071 1.5E-07 56.2 9.6 88 100-192 2-99 (369)
347 TIGR00521 coaBC_dfp phosphopan 96.9 0.0047 1E-07 57.5 8.3 69 97-170 183-272 (390)
348 PF04127 DFP: DNA / pantothena 96.8 0.0053 1.1E-07 51.6 7.7 59 107-170 27-89 (185)
349 PRK09288 purT phosphoribosylgl 96.8 0.0069 1.5E-07 54.5 8.8 71 97-170 10-82 (395)
350 COG2085 Predicted dinucleotide 96.8 0.0037 8.1E-08 54.1 6.4 63 100-170 1-67 (211)
351 KOG1209 1-Acyl dihydroxyaceton 96.8 0.0027 5.9E-08 56.2 5.6 66 99-164 7-74 (289)
352 PF00056 Ldh_1_N: lactate/mala 96.7 0.0053 1.1E-07 49.0 6.3 64 100-170 1-76 (141)
353 KOG4169 15-hydroxyprostaglandi 96.7 0.0029 6.2E-08 56.1 5.2 73 98-170 4-90 (261)
354 TIGR01019 sucCoAalpha succinyl 96.7 0.018 3.8E-07 51.7 10.3 85 99-193 6-97 (286)
355 TIGR02114 coaB_strep phosphopa 96.7 0.0043 9.3E-08 53.3 6.1 62 103-170 18-87 (227)
356 PF02571 CbiJ: Precorrin-6x re 96.7 0.021 4.5E-07 50.1 10.5 88 100-189 1-99 (249)
357 cd08295 double_bond_reductase_ 96.6 0.0049 1.1E-07 53.9 6.2 74 97-171 150-229 (338)
358 COG0604 Qor NADPH:quinone redu 96.6 0.018 3.9E-07 51.8 9.7 94 97-193 141-243 (326)
359 cd08266 Zn_ADH_like1 Alcohol d 96.6 0.02 4.3E-07 48.5 9.5 93 98-193 166-267 (342)
360 PRK08306 dipicolinate synthase 96.6 0.0079 1.7E-07 53.5 7.3 69 96-170 149-217 (296)
361 cd08294 leukotriene_B4_DH_like 96.6 0.014 3.1E-07 50.0 8.6 92 98-192 143-242 (329)
362 PRK00258 aroE shikimate 5-dehy 96.6 0.0024 5.1E-08 55.9 3.8 67 96-170 120-192 (278)
363 PRK11199 tyrA bifunctional cho 96.5 0.0064 1.4E-07 55.7 6.6 52 99-170 98-149 (374)
364 PF13380 CoA_binding_2: CoA bi 96.5 0.0074 1.6E-07 46.7 6.0 81 100-192 1-88 (116)
365 TIGR01142 purT phosphoribosylg 96.5 0.011 2.4E-07 53.0 7.9 67 101-170 1-69 (380)
366 TIGR01035 hemA glutamyl-tRNA r 96.5 0.0035 7.6E-08 58.2 4.8 67 96-170 177-247 (417)
367 cd01075 NAD_bind_Leu_Phe_Val_D 96.5 0.0094 2E-07 50.1 6.9 40 96-136 25-64 (200)
368 PLN02948 phosphoribosylaminoim 96.5 0.04 8.6E-07 53.6 11.9 75 93-170 16-90 (577)
369 PRK11863 N-acetyl-gamma-glutam 96.5 0.015 3.3E-07 52.8 8.5 76 99-192 2-82 (313)
370 PRK08040 putative semialdehyde 96.4 0.031 6.7E-07 51.2 10.5 88 98-192 3-98 (336)
371 TIGR02356 adenyl_thiF thiazole 96.4 0.027 5.9E-07 47.3 9.3 98 95-195 17-147 (202)
372 PRK08655 prephenate dehydrogen 96.4 0.0062 1.4E-07 57.0 6.0 64 100-170 1-65 (437)
373 cd08250 Mgc45594_like Mgc45594 96.4 0.037 8E-07 47.6 10.0 94 97-193 138-239 (329)
374 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.012 2.6E-07 48.7 6.7 55 95-170 40-94 (168)
375 cd05294 LDH-like_MDH_nadp A la 96.4 0.0059 1.3E-07 54.6 5.2 34 100-133 1-36 (309)
376 cd05213 NAD_bind_Glutamyl_tRNA 96.4 0.0048 1E-07 55.0 4.6 66 97-170 176-245 (311)
377 TIGR02825 B4_12hDH leukotriene 96.4 0.0075 1.6E-07 52.3 5.7 73 98-170 138-214 (325)
378 PRK02472 murD UDP-N-acetylmura 96.3 0.021 4.5E-07 52.4 8.8 82 98-185 4-94 (447)
379 PRK00045 hemA glutamyl-tRNA re 96.3 0.0051 1.1E-07 57.2 4.8 67 96-170 179-249 (423)
380 PRK00094 gpsA NAD(P)H-dependen 96.3 0.0051 1.1E-07 53.6 4.6 71 99-170 1-78 (325)
381 KOG2774 NAD dependent epimeras 96.3 0.008 1.7E-07 54.1 5.8 97 97-198 42-165 (366)
382 cd08230 glucose_DH Glucose deh 96.3 0.031 6.7E-07 49.4 9.3 90 98-192 172-270 (355)
383 PF13241 NAD_binding_7: Putati 96.3 0.015 3.2E-07 43.8 6.1 78 96-184 4-86 (103)
384 PRK05678 succinyl-CoA syntheta 96.2 0.045 9.8E-07 49.2 10.2 86 98-193 7-99 (291)
385 TIGR01851 argC_other N-acetyl- 96.2 0.02 4.3E-07 52.1 7.9 75 100-192 2-81 (310)
386 cd08244 MDR_enoyl_red Possible 96.2 0.034 7.4E-07 47.3 8.7 92 98-192 142-242 (324)
387 PF03807 F420_oxidored: NADP o 96.2 0.013 2.8E-07 42.5 5.3 63 101-170 1-68 (96)
388 TIGR01161 purK phosphoribosyla 96.1 0.019 4.1E-07 51.3 7.3 65 101-168 1-65 (352)
389 TIGR00872 gnd_rel 6-phosphoglu 96.1 0.012 2.6E-07 52.0 5.8 66 100-170 1-66 (298)
390 PRK00066 ldh L-lactate dehydro 96.1 0.07 1.5E-06 48.0 10.8 66 97-170 4-80 (315)
391 cd08293 PTGR2 Prostaglandin re 96.1 0.021 4.6E-07 49.6 7.3 70 100-170 156-231 (345)
392 PRK06718 precorrin-2 dehydroge 96.1 0.021 4.5E-07 48.3 6.9 69 96-170 7-77 (202)
393 PRK06522 2-dehydropantoate 2-r 96.1 0.013 2.9E-07 50.4 5.9 69 100-170 1-73 (304)
394 COG0136 Asd Aspartate-semialde 96.1 0.026 5.6E-07 52.0 7.9 92 99-197 1-101 (334)
395 PF00899 ThiF: ThiF family; I 96.1 0.074 1.6E-06 41.3 9.4 95 99-196 2-129 (135)
396 PRK05476 S-adenosyl-L-homocyst 96.0 0.016 3.5E-07 54.7 6.6 65 97-170 210-274 (425)
397 PRK09260 3-hydroxybutyryl-CoA 96.0 0.0077 1.7E-07 52.6 4.1 68 100-170 2-88 (288)
398 TIGR01470 cysG_Nterm siroheme 96.0 0.038 8.2E-07 46.9 8.2 83 96-184 6-95 (205)
399 PLN03154 putative allyl alcoho 96.0 0.053 1.1E-06 48.3 9.4 91 98-191 158-258 (348)
400 PRK07417 arogenate dehydrogena 96.0 0.022 4.9E-07 49.6 6.8 64 100-170 1-64 (279)
401 PRK06849 hypothetical protein; 96.0 0.029 6.2E-07 50.9 7.7 38 98-135 3-40 (389)
402 KOG1478 3-keto sterol reductas 95.9 0.011 2.3E-07 53.6 4.7 72 99-170 3-96 (341)
403 PRK14619 NAD(P)H-dependent gly 95.9 0.024 5.2E-07 50.1 6.8 36 98-134 3-38 (308)
404 PTZ00187 succinyl-CoA syntheta 95.9 0.075 1.6E-06 48.6 10.1 88 98-192 28-121 (317)
405 TIGR01745 asd_gamma aspartate- 95.9 0.056 1.2E-06 50.3 9.2 82 100-186 1-91 (366)
406 PRK06719 precorrin-2 dehydroge 95.8 0.075 1.6E-06 43.2 8.9 81 95-182 9-94 (157)
407 TIGR03366 HpnZ_proposed putati 95.8 0.07 1.5E-06 45.8 9.0 89 98-192 120-219 (280)
408 cd05280 MDR_yhdh_yhfp Yhdh and 95.8 0.075 1.6E-06 45.2 9.2 90 100-192 148-244 (325)
409 cd01485 E1-1_like Ubiquitin ac 95.8 0.17 3.6E-06 42.5 11.1 100 95-196 15-150 (198)
410 PRK06901 aspartate-semialdehyd 95.8 0.032 6.9E-07 51.1 7.2 76 100-184 4-89 (322)
411 cd08239 THR_DH_like L-threonin 95.8 0.085 1.8E-06 45.9 9.6 90 97-192 162-263 (339)
412 PRK07066 3-hydroxybutyryl-CoA 95.8 0.03 6.4E-07 50.9 6.9 71 99-170 7-90 (321)
413 cd05276 p53_inducible_oxidored 95.8 0.06 1.3E-06 44.8 8.3 73 98-171 139-216 (323)
414 PF10727 Rossmann-like: Rossma 95.8 0.0082 1.8E-07 47.8 2.9 68 96-170 7-75 (127)
415 PF02826 2-Hacid_dh_C: D-isome 95.8 0.016 3.6E-07 47.4 4.8 67 95-170 32-98 (178)
416 cd08253 zeta_crystallin Zeta-c 95.8 0.028 6.2E-07 47.0 6.3 73 98-171 144-221 (325)
417 smart00859 Semialdhyde_dh Semi 95.8 0.075 1.6E-06 40.4 8.1 67 101-170 1-72 (122)
418 TIGR01505 tartro_sem_red 2-hyd 95.7 0.011 2.5E-07 51.4 3.9 61 102-170 2-62 (291)
419 PRK11559 garR tartronate semia 95.7 0.018 3.9E-07 50.1 5.2 63 100-170 3-65 (296)
420 cd05288 PGDH Prostaglandin deh 95.7 0.11 2.3E-06 44.6 9.9 90 98-192 145-245 (329)
421 PRK11880 pyrroline-5-carboxyla 95.7 0.039 8.4E-07 47.2 7.1 64 99-170 2-69 (267)
422 cd08268 MDR2 Medium chain dehy 95.7 0.067 1.4E-06 44.9 8.4 72 98-170 144-220 (328)
423 cd05291 HicDH_like L-2-hydroxy 95.7 0.11 2.4E-06 46.1 10.2 63 100-170 1-75 (306)
424 TIGR02824 quinone_pig3 putativ 95.7 0.092 2E-06 44.0 9.1 92 98-192 139-239 (325)
425 PRK09880 L-idonate 5-dehydroge 95.6 0.093 2E-06 46.2 9.3 90 98-191 169-266 (343)
426 PLN00203 glutamyl-tRNA reducta 95.6 0.029 6.2E-07 54.1 6.5 70 97-170 264-336 (519)
427 COG0002 ArgC Acetylglutamate s 95.6 0.048 1E-06 50.5 7.6 91 99-192 2-102 (349)
428 cd08245 CAD Cinnamyl alcohol d 95.6 0.07 1.5E-06 46.0 8.2 91 97-191 161-256 (330)
429 cd01338 MDH_choloroplast_like 95.6 0.038 8.2E-07 50.0 6.8 64 100-170 3-85 (322)
430 TIGR03451 mycoS_dep_FDH mycoth 95.6 0.095 2.1E-06 46.5 9.2 90 97-192 175-277 (358)
431 cd05188 MDR Medium chain reduc 95.6 0.031 6.8E-07 45.7 5.7 93 97-193 133-234 (271)
432 TIGR02717 AcCoA-syn-alpha acet 95.5 0.087 1.9E-06 49.5 9.3 85 98-192 6-97 (447)
433 PRK13940 glutamyl-tRNA reducta 95.5 0.017 3.7E-07 54.1 4.6 73 94-170 176-249 (414)
434 COG0026 PurK Phosphoribosylami 95.5 0.051 1.1E-06 50.7 7.6 66 99-167 1-66 (375)
435 PLN02688 pyrroline-5-carboxyla 95.5 0.026 5.6E-07 48.3 5.3 63 100-170 1-68 (266)
436 PRK09599 6-phosphogluconate de 95.5 0.038 8.3E-07 48.7 6.3 65 101-170 2-66 (301)
437 PRK14618 NAD(P)H-dependent gly 95.5 0.04 8.7E-07 48.9 6.5 71 99-170 4-81 (328)
438 PLN02740 Alcohol dehydrogenase 95.4 0.13 2.9E-06 46.2 9.8 94 97-192 197-301 (381)
439 PRK08762 molybdopterin biosynt 95.4 0.16 3.5E-06 46.4 10.4 95 96-193 132-259 (376)
440 PRK04308 murD UDP-N-acetylmura 95.4 0.1 2.2E-06 48.1 9.1 81 99-185 5-93 (445)
441 TIGR01759 MalateDH-SF1 malate 95.4 0.071 1.5E-06 48.4 7.8 65 99-170 3-86 (323)
442 PRK07877 hypothetical protein; 95.4 0.062 1.4E-06 53.9 8.1 94 94-191 102-228 (722)
443 cd08243 quinone_oxidoreductase 95.3 0.077 1.7E-06 44.7 7.4 74 98-171 142-216 (320)
444 PRK08293 3-hydroxybutyryl-CoA 95.3 0.077 1.7E-06 46.4 7.6 35 100-135 4-38 (287)
445 PRK15461 NADH-dependent gamma- 95.2 0.029 6.2E-07 49.5 4.8 63 100-170 2-64 (296)
446 PRK15469 ghrA bifunctional gly 95.2 0.072 1.6E-06 48.0 7.3 64 97-170 134-197 (312)
447 cd01337 MDH_glyoxysomal_mitoch 95.2 0.037 7.9E-07 50.1 5.4 69 100-170 1-75 (310)
448 TIGR00507 aroE shikimate 5-deh 95.2 0.045 9.9E-07 47.6 5.8 38 98-136 116-153 (270)
449 PRK01438 murD UDP-N-acetylmura 95.2 0.11 2.4E-06 48.4 8.7 66 98-170 15-85 (480)
450 cd08289 MDR_yhfp_like Yhfp put 95.2 0.064 1.4E-06 45.9 6.6 71 99-170 147-220 (326)
451 cd08281 liver_ADH_like1 Zinc-d 95.2 0.17 3.6E-06 45.2 9.5 91 98-192 191-291 (371)
452 PRK13403 ketol-acid reductoiso 95.2 0.054 1.2E-06 49.9 6.4 69 93-170 10-78 (335)
453 PRK07819 3-hydroxybutyryl-CoA 95.2 0.027 6E-07 49.7 4.4 37 99-136 5-41 (286)
454 KOG0023 Alcohol dehydrogenase, 95.2 0.039 8.6E-07 51.0 5.5 72 98-170 181-253 (360)
455 PTZ00075 Adenosylhomocysteinas 95.2 0.064 1.4E-06 51.5 7.1 66 96-170 251-316 (476)
456 COG2130 Putative NADP-dependen 95.1 0.063 1.4E-06 49.4 6.7 97 99-196 151-254 (340)
457 PRK10754 quinone oxidoreductas 95.1 0.23 4.9E-06 42.8 9.9 91 98-191 140-239 (327)
458 cd08292 ETR_like_2 2-enoyl thi 95.1 0.095 2.1E-06 44.7 7.5 72 98-170 139-215 (324)
459 PRK03369 murD UDP-N-acetylmura 95.1 0.12 2.6E-06 48.8 8.8 84 96-185 9-96 (488)
460 PRK05442 malate dehydrogenase; 95.1 0.068 1.5E-06 48.6 6.8 66 98-170 3-87 (326)
461 cd08301 alcohol_DH_plants Plan 95.1 0.2 4.2E-06 44.6 9.7 92 97-193 186-291 (369)
462 PRK04207 glyceraldehyde-3-phos 95.1 0.11 2.4E-06 47.3 8.2 92 99-192 1-110 (341)
463 PLN02928 oxidoreductase family 95.1 0.065 1.4E-06 48.9 6.7 74 96-170 156-233 (347)
464 COG0289 DapB Dihydrodipicolina 95.1 0.22 4.8E-06 44.6 9.8 87 99-190 2-100 (266)
465 cd05282 ETR_like 2-enoyl thioe 95.1 0.29 6.3E-06 41.6 10.3 94 97-192 137-238 (323)
466 cd01492 Aos1_SUMO Ubiquitin ac 95.0 0.34 7.5E-06 40.7 10.5 98 95-196 17-147 (197)
467 PRK06444 prephenate dehydrogen 95.0 0.078 1.7E-06 45.1 6.7 28 100-127 1-28 (197)
468 PRK07502 cyclohexadienyl dehyd 95.0 0.053 1.2E-06 47.7 5.8 66 99-170 6-73 (307)
469 TIGR02823 oxido_YhdH putative 95.0 0.18 3.9E-06 43.2 8.9 72 97-170 143-218 (323)
470 cd00757 ThiF_MoeB_HesA_family 95.0 0.22 4.8E-06 42.4 9.3 97 95-194 17-146 (228)
471 TIGR01772 MDH_euk_gproteo mala 94.9 0.048 1E-06 49.3 5.3 68 101-170 1-74 (312)
472 TIGR02818 adh_III_F_hyde S-(hy 94.8 0.24 5.2E-06 44.3 9.6 93 98-192 185-288 (368)
473 PF01262 AlaDh_PNT_C: Alanine 94.8 0.028 6.1E-07 45.6 3.2 74 96-170 17-109 (168)
474 PRK13243 glyoxylate reductase; 94.8 0.065 1.4E-06 48.5 5.9 65 96-170 147-211 (333)
475 PRK14194 bifunctional 5,10-met 94.8 0.079 1.7E-06 48.1 6.4 38 96-133 156-193 (301)
476 cd08300 alcohol_DH_class_III c 94.8 0.28 6.1E-06 43.7 9.8 92 97-192 185-289 (368)
477 PRK06223 malate dehydrogenase; 94.8 0.05 1.1E-06 47.9 5.0 70 99-170 2-77 (307)
478 PRK07531 bifunctional 3-hydrox 94.8 0.067 1.5E-06 50.8 6.1 71 99-170 4-87 (495)
479 PRK06130 3-hydroxybutyryl-CoA 94.7 0.19 4.1E-06 44.1 8.6 71 99-170 4-86 (311)
480 PRK12921 2-dehydropantoate 2-r 94.7 0.16 3.5E-06 43.9 8.0 69 100-170 1-75 (305)
481 cd01483 E1_enzyme_family Super 94.7 0.31 6.7E-06 38.0 8.9 89 101-192 1-122 (143)
482 PRK07574 formate dehydrogenase 94.7 0.088 1.9E-06 49.0 6.7 67 96-170 189-255 (385)
483 TIGR00936 ahcY adenosylhomocys 94.7 0.086 1.9E-06 49.5 6.6 65 97-170 193-257 (406)
484 PRK12480 D-lactate dehydrogena 94.7 0.082 1.8E-06 47.9 6.2 63 96-170 143-205 (330)
485 cd00650 LDH_MDH_like NAD-depen 94.7 0.13 2.7E-06 44.5 7.1 64 102-170 1-77 (263)
486 TIGR02354 thiF_fam2 thiamine b 94.7 0.35 7.6E-06 40.8 9.6 94 95-190 17-143 (200)
487 PRK14188 bifunctional 5,10-met 94.7 0.091 2E-06 47.5 6.4 37 96-132 155-192 (296)
488 TIGR03201 dearomat_had 6-hydro 94.6 0.29 6.3E-06 43.2 9.4 39 97-136 165-203 (349)
489 PRK06545 prephenate dehydrogen 94.6 0.055 1.2E-06 49.1 4.9 66 101-170 2-67 (359)
490 PRK05597 molybdopterin biosynt 94.6 0.32 7E-06 44.4 9.9 97 95-194 24-153 (355)
491 PRK12490 6-phosphogluconate de 94.6 0.1 2.2E-06 46.0 6.5 65 101-170 2-66 (299)
492 TIGR03026 NDP-sugDHase nucleot 94.6 0.04 8.6E-07 50.7 4.0 70 100-170 1-83 (411)
493 cd05292 LDH_2 A subgroup of L- 94.6 0.18 3.9E-06 45.0 8.0 63 100-170 1-74 (308)
494 PRK00141 murD UDP-N-acetylmura 94.5 0.15 3.2E-06 48.0 7.8 82 97-184 13-99 (473)
495 PRK08644 thiamine biosynthesis 94.5 0.38 8.2E-06 40.9 9.6 95 95-192 24-151 (212)
496 KOG1198 Zinc-binding oxidoredu 94.5 0.17 3.7E-06 46.4 7.9 70 97-170 156-232 (347)
497 PLN03139 formate dehydrogenase 94.5 0.098 2.1E-06 48.8 6.4 67 96-170 196-262 (386)
498 PTZ00354 alcohol dehydrogenase 94.5 0.15 3.2E-06 43.5 7.1 73 98-170 140-217 (334)
499 PRK13304 L-aspartate dehydroge 94.5 0.19 4.1E-06 43.9 7.8 84 100-192 2-93 (265)
500 PRK02705 murD UDP-N-acetylmura 94.5 0.28 6.1E-06 45.2 9.3 84 101-185 2-94 (459)
No 1
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.84 E-value=1.8e-20 Score=163.46 Aligned_cols=96 Identities=22% Similarity=0.280 Sum_probs=83.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++++++|+++||+|++++|++++.......+++++.+|++|++++.++++|+|+|||+.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 579999999999999999999999999999998765433333569999999999999999999999999971
Q ss_pred -------hh--HHHHHHHhCCCCeEEEEcccce
Q 029118 172 -------EG--FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 -------~G--~lldAA~~~GVkRiV~vSS~~V 195 (198)
.+ .+++||+++||+||||+||.++
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~ 113 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNA 113 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccccc
Confidence 12 2889999999999999999754
No 2
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.83 E-value=1.8e-20 Score=169.12 Aligned_cols=99 Identities=18% Similarity=0.256 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc------ccc--cCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a------~~~--~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|+|||||||||++++++||.+||.||+.||+++.. ..+ .+.+.+++.+|++|++++.+|++|||+|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 567999999999999999999999999999999999762 221 234589999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCeEEEEccccee
Q 029118 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
++ .|+ ++++|++.. ||||||+||.++-
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv 133 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAV 133 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHh
Confidence 82 243 899998887 9999999997653
No 3
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.82 E-value=1.2e-19 Score=144.61 Aligned_cols=94 Identities=27% Similarity=0.376 Sum_probs=86.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC---------h
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---------E 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---------~ 172 (198)
|+|+||||++|++++++|+++|++|++++|++++... ..+++++++|+.|++++.++++|+|+||++. .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 7999999999999999999999999999999987655 6789999999999999999999999999982 1
Q ss_pred hHHHHHHHhCCCCeEEEEcccceec
Q 029118 173 GFISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
..++++|+++|++|+|++|+.++|+
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~~~ 103 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGVYR 103 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTGTT
T ss_pred ccccccccccccccceeeeccccCC
Confidence 1389999999999999999999886
No 4
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.81 E-value=7.6e-20 Score=159.79 Aligned_cols=95 Identities=23% Similarity=0.362 Sum_probs=80.5
Q ss_pred EEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc--cccCCc-eEEEEccCCCHHHHHHhhcCccEEEEcC------
Q 029118 103 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTY-VESMAGDASNKKFLKTALRGVRSIICPS------ 171 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~--~~~g~~-vevV~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (198)
|||||+||+|+||+++|+++| ++||+++|++.... ...... .+++.+|++|++++.+|++|||+|||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 799999999999999999999 89999998765432 112222 3499999999999999999999999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|++++|+||||+||.+|+.
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~ 121 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVF 121 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeE
Confidence 233 89999999999999999998864
No 5
>PLN02214 cinnamoyl-CoA reductase
Probab=99.77 E-value=3.4e-18 Score=151.38 Aligned_cols=105 Identities=21% Similarity=0.249 Sum_probs=87.1
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----ccc--CCceEEEEccCCCHHHHHHhhcCcc
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESF--GTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~--g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
||....+++|||||||||||++++++|+++|++|++++|+.+... ... ...++++.+|++|++.+.++++++|
T Consensus 4 ~~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 83 (342)
T PLN02214 4 DVASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCD 83 (342)
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCC
Confidence 345566789999999999999999999999999999999865321 111 1358899999999999999999999
Q ss_pred EEEEcC---------------hhH--HHHHHHhCCCCeEEEEccc-ceec
Q 029118 166 SIICPS---------------EGF--ISNAGSLKGVQHVILLSQG-AVVC 197 (198)
Q Consensus 166 aVIh~a---------------~G~--lldAA~~~GVkRiV~vSS~-~Vy~ 197 (198)
+|||++ .|+ ++++|++++++||||+||. ++|.
T Consensus 84 ~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg 133 (342)
T PLN02214 84 GVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYM 133 (342)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeec
Confidence 999982 122 7899999999999999996 5773
No 6
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.77 E-value=2.5e-18 Score=152.09 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c-------cCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S-------FGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~-------~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
..+++|||||||||||++++++|+++|++|++++|....... . ....++++.+|++|++.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 345789999999999999999999999999999985432110 0 01357899999999999999999999
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ .|+ ++++|++.|++||||+||.+||+
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg 146 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYG 146 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhC
Confidence 999982 122 88999999999999999999986
No 7
>PLN02427 UDP-apiose/xylose synthase
Probab=99.77 E-value=2.7e-18 Score=153.37 Aligned_cols=97 Identities=11% Similarity=0.046 Sum_probs=81.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
++|||||||||||++|+++|+++ |++|++++|+..+.... +..+++++.+|++|++.+.++++++|+|||++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlA 94 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLA 94 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcc
Confidence 57999999999999999999998 59999999876543221 12469999999999999999999999999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++ +||||+||.+||+
T Consensus 95 a~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg 141 (386)
T PLN02427 95 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYG 141 (386)
T ss_pred cccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeC
Confidence 011 688888887 9999999999986
No 8
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.76 E-value=2.9e-18 Score=146.32 Aligned_cols=93 Identities=13% Similarity=0.150 Sum_probs=81.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh------cC-ccEEEEcC--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPS-- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL------~G-vDaVIh~a-- 171 (198)
+||||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|+.|++++.+|+ +| +|+|+|+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 4899999999999999999999999999999987653 246888999999999999999 68 99999872
Q ss_pred -------hhHHHHHHHhCCCCeEEEEccccee
Q 029118 172 -------EGFISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 -------~G~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.-.++++|+++||+||||+||.+++
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIE 109 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeeccccC
Confidence 1138999999999999999997654
No 9
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.75 E-value=7.3e-18 Score=144.97 Aligned_cols=98 Identities=15% Similarity=0.209 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cc-----cCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES-----FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
..++|||||||||||++++++|+++||+|++++|+..... .. ..++++++.+|++|++.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999865421 10 124689999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhC-CCCeEEEEcccce
Q 029118 170 PS-------------------EGF--ISNAGSLK-GVQHVILLSQGAV 195 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~-GVkRiV~vSS~~V 195 (198)
++ .|+ ++++|++. +++||||+||.++
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~ 130 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAA 130 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHH
Confidence 72 011 78888877 9999999999763
No 10
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.74 E-value=1.9e-17 Score=148.70 Aligned_cols=107 Identities=17% Similarity=0.092 Sum_probs=87.4
Q ss_pred cCCccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 90 KEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 90 ~~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|... +++|||||||||||++++++|+++||+|+++.|............++++.+|++|.+.+.++++++|+|||
T Consensus 13 ~~~~~~~~-~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 13 REPYWPSE-KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCCCCCC-CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence 45666664 46899999999999999999999999999999865322111112368899999999999999999999999
Q ss_pred cC--h-------------------h--HHHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS--E-------------------G--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--~-------------------G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ . + .++++|++.+++||||+||..+|.
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg 142 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYP 142 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcC
Confidence 82 0 1 178999999999999999999985
No 11
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.74 E-value=2.3e-17 Score=139.20 Aligned_cols=105 Identities=23% Similarity=0.303 Sum_probs=87.1
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCC-HHHHHHhh-cCccEEE
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASN-KKFLKTAL-RGVRSII 168 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D-~~sL~~AL-~GvDaVI 168 (198)
+-++..+++||||||||+||++++++|+++||+|++++|++++..... +.+++++.+|++| ...+.+++ .++|+||
T Consensus 11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 11 DAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred ccccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 344556789999999999999999999999999999999886643322 2468999999998 57888888 7999999
Q ss_pred EcC----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 169 CPS----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~a----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++. .++ +++++++.+++||||+||.++|.
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g 137 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNG 137 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccC
Confidence 871 022 78999999999999999998874
No 12
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.74 E-value=1.7e-17 Score=143.91 Aligned_cols=99 Identities=21% Similarity=0.276 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cc-----cCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES-----FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|||||||||||++++++|+++|++|++++|+..... .. ....++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4579999999999999999999999999999999875421 11 124689999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhC-CCCeEEEEccccee
Q 029118 170 PS-------------------EGF--ISNAGSLK-GVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy 196 (198)
++ .|+ ++++|+++ +++||||+||.++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~ 132 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAV 132 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhe
Confidence 82 011 67888875 89999999998754
No 13
>PLN02650 dihydroflavonol-4-reductase
Probab=99.72 E-value=3.1e-17 Score=144.30 Aligned_cols=99 Identities=21% Similarity=0.343 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---c--c---CCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S--F---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~--~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
..++|||||||||||++++++|+++|++|++++|++..... . . ...++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 35689999999999999999999999999999998754321 1 1 12578999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCeEEEEccccee
Q 029118 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
++ .|+ ++++|++.+ ++||||+||.++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~ 132 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTV 132 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhc
Confidence 82 122 789998877 8999999998765
No 14
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.72 E-value=4.3e-17 Score=143.22 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=81.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccC-CceEEEEccCC-CHHHHHHhhcCccEEEEcC----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g-~~vevV~GDl~-D~~sL~~AL~GvDaVIh~a---- 171 (198)
+++|||||||||||++++++|+++ |++|++++|+..+.....+ ..++++.+|++ |++.+.++++++|+|||++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 368999999999999999999986 7999999987654332222 46999999997 7888999999999999971
Q ss_pred ----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+ +||||+||..||+
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg 123 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYG 123 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeec
Confidence 122 689999888 8999999999986
No 15
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.71 E-value=4.4e-17 Score=142.95 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=81.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cccc-------cCCceEEEEccCCCHHHHHHhhcC--cc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG--VR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~-------~g~~vevV~GDl~D~~sL~~AL~G--vD 165 (198)
++|||||||||||++++++|+++|++|++++|++.. .... .+.+++++.+|++|++.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 489999999999999999999999999999997642 1111 124589999999999999999985 59
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCC---eEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQ---HVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVk---RiV~vSS~~Vy~ 197 (198)
+|||++ .|+ ++++|++.|++ ||||+||.+||+
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg 137 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYG 137 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhC
Confidence 999982 122 78999988875 899999999986
No 16
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.71 E-value=6e-17 Score=141.55 Aligned_cols=99 Identities=19% Similarity=0.316 Sum_probs=82.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-----ccC--CceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFG--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
+++|||||||||||++++++|+++|++|++++|++..... .+. ++++++.+|++|++.+.++++++|+|||++
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 88 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVA 88 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeC
Confidence 6789999999999999999999999999999998653211 111 258999999999999999999999999982
Q ss_pred -------------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 172 -------------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|.+. +++||||+||.++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred CCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 011 67888765 699999999998885
No 17
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.71 E-value=9.3e-17 Score=137.25 Aligned_cols=98 Identities=27% Similarity=0.345 Sum_probs=84.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
++||||||+||||+++++.|+++|++|+++.|++.+.......+++++.+|++|++++.++++++|.|||++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 479999999999999999999999999999998765433333468999999999999999999999999972
Q ss_pred ----------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ----------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ----------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+++||||+||.++|.
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~ 118 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLG 118 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcC
Confidence 111 78889999999999999998875
No 18
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.70 E-value=4.3e-17 Score=135.62 Aligned_cols=95 Identities=26% Similarity=0.350 Sum_probs=77.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C---h---
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E--- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a---~--- 172 (198)
|+||||||.+|+++++.|+..+++|++++|++.+ +......+++++.+|+.|+++|.+||+|+|+||++ . .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 7999999999999999999999999999999854 22222356899999999999999999999999987 2 1
Q ss_pred ---hHHHHHHHhCCCCeEEEEccccee
Q 029118 173 ---GFISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 173 ---G~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
-.+++||+++||+|||+.|....+
T Consensus 81 ~~~~~li~Aa~~agVk~~v~ss~~~~~ 107 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFVPSSFGADY 107 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEEESEESSGT
T ss_pred hhhhhHHHhhhccccceEEEEEecccc
Confidence 129999999999999986655544
No 19
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.70 E-value=1.3e-16 Score=140.67 Aligned_cols=102 Identities=17% Similarity=0.241 Sum_probs=84.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+...++||||||+||||++++++|+++|++|++++|++.+.... .+.+++++.+|++|++.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 34566899999999999999999999999999999987543211 1246889999999999999999999999998
Q ss_pred C------h---------------------hH--HHHHHHhCC-CCeEEEEcccceec
Q 029118 171 S------E---------------------GF--ISNAGSLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 171 a------~---------------------G~--lldAA~~~G-VkRiV~vSS~~Vy~ 197 (198)
+ . ++ ++++|++++ ++||||+||.++|+
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg 143 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLT 143 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcc
Confidence 2 0 11 578887764 99999999999885
No 20
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.4e-16 Score=135.06 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=82.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc-cEEEEcC--------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPS-------- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv-DaVIh~a-------- 171 (198)
+|||||||||||++|+++|+++||+|+++.|...+..... ..++++.+|++|.+.+.++++++ |+|||++
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~ 80 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDS 80 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhh
Confidence 4999999999999999999999999999999776654333 56899999999999999999999 9999982
Q ss_pred -h-----h-------H--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -E-----G-------F--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -~-----G-------~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
. . + ++++|++++++||||.||.++|.
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~ 121 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVY 121 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceEC
Confidence 1 1 1 78999999999999988877664
No 21
>PLN02583 cinnamoyl-CoA reductase
Probab=99.69 E-value=2.2e-16 Score=136.91 Aligned_cols=98 Identities=16% Similarity=0.222 Sum_probs=80.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc------ccc--cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a------~~~--~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|||||||||||++++++|+++||+|++++|+..+. ... .+.+++++.+|++|++.+.+++.++|+|+|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~ 85 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCC 85 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 56899999999999999999999999999999964321 111 1246899999999999999999999999985
Q ss_pred C------------------hhH--HHHHHHhC-CCCeEEEEccccee
Q 029118 171 S------------------EGF--ISNAGSLK-GVQHVILLSQGAVV 196 (198)
Q Consensus 171 a------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy 196 (198)
. .|+ ++++|.+. +++|||++||.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~ 132 (297)
T PLN02583 86 FDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAV 132 (297)
T ss_pred CccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHhe
Confidence 1 122 78888776 79999999998654
No 22
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.69 E-value=2.4e-16 Score=143.23 Aligned_cols=102 Identities=24% Similarity=0.261 Sum_probs=85.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--------ccCCceEEEEccCCCHHHHHHhhc----C
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASNKKFLKTALR----G 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--------~~g~~vevV~GDl~D~~sL~~AL~----G 163 (198)
...+++|||||||||||++++++|+++|++|++++|++.+... ...++++++.+|++|++++.++++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 4456789999999999999999999999999999998754210 113468999999999999999998 5
Q ss_pred ccEEEEcC---------------hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS---------------EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a---------------~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|+|||+. .+ .++++|++.|++|||++||.++|.
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~ 187 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK 187 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC
Confidence 99999871 11 278999999999999999998874
No 23
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.68 E-value=2.1e-16 Score=151.98 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=83.3
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccccccc-CCceEEEEccCCCHHH-HHHhhcCccEEEEcC
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNKKF-LKTALRGVRSIICPS 171 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~s-L~~AL~GvDaVIh~a 171 (198)
..-+.++|||||||||||+||+++|+++ ||+|++++|++....... ..+++++.+|++|+.. +.++++++|+|||++
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 3456778999999999999999999985 799999999775432222 2468999999999765 678899999999972
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++ +||||+||..||+
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg 437 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYG 437 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcC
Confidence 112 789999998 8999999999986
No 24
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.67 E-value=4e-16 Score=144.17 Aligned_cols=102 Identities=20% Similarity=0.183 Sum_probs=81.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-------c----------------cccCCceEEEEccCC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------M----------------ESFGTYVESMAGDAS 152 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-------~----------------~~~g~~vevV~GDl~ 152 (198)
...+++|||||||||||+||+++|+++|++|+++.|..... . ...+.+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 34457899999999999999999999999999986422110 0 001235899999999
Q ss_pred CHHHHHHhhc--CccEEEEcC-----------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 153 NKKFLKTALR--GVRSIICPS-----------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 153 D~~sL~~AL~--GvDaVIh~a-----------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
|++.+.++++ ++|+|||++ .|+ ++++|++.|++ ||||+||.+||+
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG 196 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYG 196 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecC
Confidence 9999999998 489999982 011 78999999996 999999999996
No 25
>PLN02686 cinnamoyl-CoA reductase
Probab=99.67 E-value=2.8e-16 Score=141.04 Aligned_cols=99 Identities=15% Similarity=0.185 Sum_probs=81.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--c---------CCceEEEEccCCCHHHHHHhhcCc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--F---------GTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~---------g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
...+++|||||||||||++++++|+++|++|++++|+.+..... . ...++++.+|++|++.+.++++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 44577999999999999999999999999999999976442211 0 125889999999999999999999
Q ss_pred cEEEEcC-----h---------------hH--HHHHHHhC-CCCeEEEEcccc
Q 029118 165 RSIICPS-----E---------------GF--ISNAGSLK-GVQHVILLSQGA 194 (198)
Q Consensus 165 DaVIh~a-----~---------------G~--lldAA~~~-GVkRiV~vSS~~ 194 (198)
|+|||++ . ++ ++++|++. +|+||||+||..
T Consensus 130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~ 182 (367)
T PLN02686 130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLL 182 (367)
T ss_pred cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence 9999972 0 11 78999875 899999999963
No 26
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.66 E-value=5.2e-16 Score=139.44 Aligned_cols=98 Identities=20% Similarity=0.237 Sum_probs=82.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCc-eEEEEccCCCHHHHHHhhc--CccEEEEcC-----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALR--GVRSIICPS----- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~-vevV~GDl~D~~sL~~AL~--GvDaVIh~a----- 171 (198)
++||||||+|+||+|.+.+|+++|++|.++..-...-.+..... +++++||+.|.+.|.+.++ .+|+|||.+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 58999999999999999999999999999985333222222222 6899999999999999995 679999982
Q ss_pred ---------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|+++||++|||-||.+||+
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG 123 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYG 123 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcC
Confidence 133 89999999999999999999997
No 27
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.65 E-value=1.2e-15 Score=132.21 Aligned_cols=98 Identities=20% Similarity=0.266 Sum_probs=81.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---c-----cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S-----FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++||||||+||||++++++|+++|++|++++|++..... . ...+++++.+|++|++.+.++++++|+|||+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~ 84 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT 84 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence 5789999999999999999999999999999998754211 1 1135899999999999999999999999998
Q ss_pred C--------------------hhH--HHHHHHhC-CCCeEEEEccccee
Q 029118 171 S--------------------EGF--ISNAGSLK-GVQHVILLSQGAVV 196 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy 196 (198)
+ .++ ++++|.+. +++|||++||.++|
T Consensus 85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~ 133 (325)
T PLN02989 85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAV 133 (325)
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhe
Confidence 2 011 67888764 68999999998765
No 28
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.65 E-value=4.3e-16 Score=127.05 Aligned_cols=96 Identities=24% Similarity=0.309 Sum_probs=82.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC--h----
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPS--E---- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a--~---- 172 (198)
|||||||||||++++++|+++|++|+++.|++...... ...+++++.+|+.|++.+.+++++. |+|||++ .
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 79999999999999999999999999999887654211 1126999999999999999999888 9999982 0
Q ss_pred --------------h--HHHHHHHhCCCCeEEEEcccceec
Q 029118 173 --------------G--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 --------------G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++++|++++++|+||+||..+|.
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~ 121 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYG 121 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGT
T ss_pred ccccccccccccccccccccccccccccccccccccccccc
Confidence 0 178999999999999999999885
No 29
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.64 E-value=1.6e-15 Score=131.58 Aligned_cols=98 Identities=22% Similarity=0.245 Sum_probs=79.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
|+|||||||||||++++++|+++|++|+++.|....... ..+..++++.+|++|++++.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 579999999999999999999999999999765322111 112357889999999999999986 68999997
Q ss_pred C--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++ ++++|+++|+++||++||.++|.
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYG 129 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhC
Confidence 2 012 78899999999999999998874
No 30
>PLN00016 RNA-binding protein; Provisional
Probab=99.64 E-value=4.7e-16 Score=139.26 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=80.0
Q ss_pred CCCCeEEEE----cCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-----------ccCCceEEEEccCCCHHHHHHhh
Q 029118 97 EARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 97 ~~~~~ILVT----GATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----------~~g~~vevV~GDl~D~~sL~~AL 161 (198)
..+++|||| |||||||++++++|+++||+|++++|++..... ....+++++.+|+.|...+. +.
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~ 128 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AG 128 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-cc
Confidence 334689999 999999999999999999999999998754211 11235899999998843333 34
Q ss_pred cCccEEEEcC----hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 162 RGVRSIICPS----EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 162 ~GvDaVIh~a----~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++|+|||+. .+ .++++|+++||+||||+||.+||+
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg 170 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYK 170 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcC
Confidence 6899999982 22 389999999999999999999985
No 31
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.64 E-value=1.6e-15 Score=132.68 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cccc------cCCceEEEEccCCCHHHHHHhhcC--c
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--V 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~------~g~~vevV~GDl~D~~sL~~AL~G--v 164 (198)
++++|||||||||||++++++|+++|++|+++.|++.. .... .+.+++++.+|++|.+.+.++++. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 45789999999999999999999999999999987542 1111 124589999999999999999985 5
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCC-----eEEEEcccceec
Q 029118 165 RSIICPS--------------------EGF--ISNAGSLKGVQ-----HVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a--------------------~G~--lldAA~~~GVk-----RiV~vSS~~Vy~ 197 (198)
|+|||++ .|+ ++++|++.+++ ||||+||.++|+
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg 144 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYG 144 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhC
Confidence 9999982 122 78999988886 999999998886
No 32
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.62 E-value=3.9e-15 Score=130.46 Aligned_cols=99 Identities=16% Similarity=0.143 Sum_probs=77.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc---c---cc-cCCceEEEEccCCCHHHHHHhhcC--ccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---M---ES-FGTYVESMAGDASNKKFLKTALRG--VRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a---~---~~-~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh 169 (198)
+++|||||||||||++++++|+++|++|+++.++.... . .. ....++++.+|++|++.+.+++++ +|.|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 36899999999999999999999999877665533211 1 10 123578999999999999999984 899999
Q ss_pred cC--------------------hhH--HHHHHHh---------CCCCeEEEEcccceec
Q 029118 170 PS--------------------EGF--ISNAGSL---------KGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--------------------~G~--lldAA~~---------~GVkRiV~vSS~~Vy~ 197 (198)
++ .|+ ++++|++ .++++|||+||.++|.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg 139 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYG 139 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcC
Confidence 82 112 7788865 4789999999998885
No 33
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.62 E-value=2.2e-15 Score=131.03 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=72.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (198)
|+||||||+||||++++++|+++| +|+++.|... .+.+|++|++.+.++++ ++|+|||++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 479999999999999999999999 7999887531 35689999999999998 579999982
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.|+ ++||+||..||.
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~ 109 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFP 109 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEEC
Confidence 112 7899999996 799999999984
No 34
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.62 E-value=3.5e-15 Score=131.44 Aligned_cols=99 Identities=18% Similarity=0.163 Sum_probs=81.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a 171 (198)
+++|||||||||||++++++|+++|++|+++.|++...... .+..++++.+|++|++.+.+++++ +|.|||++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 57899999999999999999999999999999877543211 123578899999999999999986 59999982
Q ss_pred --------------------hhH--HHHHHHhCC-CCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+ ++||||+||..+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg 132 (349)
T TIGR02622 84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYR 132 (349)
T ss_pred cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhC
Confidence 012 688888877 89999999988874
No 35
>PLN02240 UDP-glucose 4-epimerase
Probab=99.62 E-value=4.2e-15 Score=129.63 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-------cc---ccCCceEEEEccCCCHHHHHHhhc--Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------ME---SFGTYVESMAGDASNKKFLKTALR--GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-------~~---~~g~~vevV~GDl~D~~sL~~AL~--GvD 165 (198)
.+++|||||||||||++++++|+++|++|+++.|..... .. ..+.+++++.+|++|++.+.++++ ++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 357899999999999999999999999999998753221 11 123468899999999999999986 689
Q ss_pred EEEEcC--------------------hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|||++ .+ .++++|++.++++|||+||.++|.
T Consensus 84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (352)
T PLN02240 84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYG 137 (352)
T ss_pred EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 999982 01 177889999999999999998884
No 36
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.61 E-value=5e-15 Score=130.34 Aligned_cols=98 Identities=26% Similarity=0.435 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc---ccc-CCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~---~~~-g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
.+++|||||||||||++++++|+++| ++|++++|+..+.. ... ...++++.+|++|++.+.++++++|+|||++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 35789999999999999999999986 78999998765421 111 2468999999999999999999999999972
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
.|+ ++++|++++++|||++||...
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~ 128 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA 128 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 022 789999999999999999654
No 37
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.61 E-value=3.9e-15 Score=124.00 Aligned_cols=96 Identities=24% Similarity=0.306 Sum_probs=83.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--h----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E---- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~---- 172 (198)
++||||||||++|++++++|+++||+|++++|+++++.... .+++++.+|+.|+.++..+++|++.++++ . .
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~ 79 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA 79 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence 57999999999999999999999999999999998876655 78999999999999999999999999876 1 1
Q ss_pred --h----HHHHHHHhCC--CCeEEEEccccee
Q 029118 173 --G----FISNAGSLKG--VQHVILLSQGAVV 196 (198)
Q Consensus 173 --G----~lldAA~~~G--VkRiV~vSS~~Vy 196 (198)
. .+++++++++ +++++++|++++.
T Consensus 80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~ 111 (275)
T COG0702 80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD 111 (275)
T ss_pred hhHHHHHHHHHHHHHhcCCceEEEEeccCCCC
Confidence 1 1566666654 9999999998764
No 38
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.60 E-value=4.6e-15 Score=137.54 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-----ccCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
...++|||||||||||++|+++|+++|++|++++|....... ....+++++.+|+.++ ++.++|+|||++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlA 191 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLA 191 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEee
Confidence 345789999999999999999999999999999875322111 1124689999999776 456899999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.|+ ||||+||..||+
T Consensus 192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg 238 (442)
T PLN02206 192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 238 (442)
T ss_pred eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhC
Confidence 112 7899999996 899999999985
No 39
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.58 E-value=7.6e-15 Score=141.01 Aligned_cols=98 Identities=20% Similarity=0.291 Sum_probs=83.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-----------C----CceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------G----TYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-----------g----~~vevV~GDl~D~~sL~~AL~G 163 (198)
+++||||||+|+||++++++|+++|++|++++|+.++..... + .+++++.+|+.|.+.+.+++.+
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLgg 159 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGN 159 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcC
Confidence 468999999999999999999999999999999886543210 1 2488999999999999999999
Q ss_pred ccEEEEcC------------------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------------------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------------------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|+|||++ .|+ ++++|+++|++|||++||++++
T Consensus 160 iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 160 ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 99999982 012 7899999999999999998764
No 40
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.58 E-value=1.1e-14 Score=139.55 Aligned_cols=99 Identities=21% Similarity=0.249 Sum_probs=79.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCC--cccccc----cCCceEEEEccCCCHHHHHHhh--cCccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~--~~a~~~----~g~~vevV~GDl~D~~sL~~AL--~GvDaVI 168 (198)
.++|||||||||||++++++|+++ +++|+++.|.. ...... ...+++++.+|++|++.+..++ .++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 468999999999999999999998 68898888743 111111 1246899999999999988776 6899999
Q ss_pred EcC--------------------hhH--HHHHHHhCC-CCeEEEEcccceec
Q 029118 169 CPS--------------------EGF--ISNAGSLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~a--------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy~ 197 (198)
|++ .++ ++++|++.+ ++||||+||..||+
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg 137 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYG 137 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhC
Confidence 982 012 789999887 99999999999885
No 41
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.58 E-value=8.1e-15 Score=138.38 Aligned_cols=97 Identities=16% Similarity=0.231 Sum_probs=78.4
Q ss_pred CeEEEEcCCChHHHHHHHHHH--HCCCcEEEEEeCCcccc--c---ccC-CceEEEEccCCCH------HHHHHhhcCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAM--E---SFG-TYVESMAGDASNK------KFLKTALRGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll--~~G~~VralvR~~~~a~--~---~~g-~~vevV~GDl~D~------~sL~~AL~GvD 165 (198)
|+|||||||||||++|+++|+ .+|++|++++|++.... . .++ .+++++.+|++|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 479999999999999999999 58999999999754321 1 111 4689999999995 455555 9999
Q ss_pred EEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ .|+ ++++|++.++++|||+||.++|+
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g 130 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAG 130 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 999982 122 78999999999999999999874
No 42
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.58 E-value=7.3e-15 Score=136.00 Aligned_cols=95 Identities=19% Similarity=0.180 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----ccc-CCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~-g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
.+.++|||||||||||++|+++|+++|++|+++.|...... ... .+.++++.+|+.++ ++.++|+|||++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA 192 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA 192 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence 34568999999999999999999999999999998542211 111 23588999998775 467899999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|+++++ ||||+||.+||+
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg 239 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYG 239 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhC
Confidence 112 7899999986 899999999985
No 43
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.57 E-value=1.3e-14 Score=124.69 Aligned_cols=97 Identities=19% Similarity=0.270 Sum_probs=78.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc------cc----------cC-CceEEEEccCCCH------H
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM------ES----------FG-TYVESMAGDASNK------K 155 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~------~~----------~g-~~vevV~GDl~D~------~ 155 (198)
+|||||||||||++++++|+++| ++|++++|+++... .. .. .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 66999999875320 00 01 4699999999864 5
Q ss_pred HHHHhhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 156 FLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 156 sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.+..+.+++|+|||++ .++ ++++|.+.++++|||+||.++|.
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~ 141 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLA 141 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccC
Confidence 6778889999999982 122 78899999999999999998874
No 44
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.56 E-value=2.4e-14 Score=121.29 Aligned_cols=97 Identities=15% Similarity=0.143 Sum_probs=76.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCc--c---cccc-cCCceEEEEccCCCHHHHHHhhcC--ccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--N---AMES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~--~---a~~~-~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~ 170 (198)
+||||||||+||++++++|+++| ++|+++.|... + .... ..++++++.+|++|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 48999999999999999999987 78888876321 1 1111 123688999999999999999998 8999998
Q ss_pred C--------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
+ .++ ++++|++.+++ ++||+||..+|+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g 130 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeC
Confidence 2 011 67888887655 899999998875
No 45
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.56 E-value=2.2e-14 Score=131.23 Aligned_cols=100 Identities=25% Similarity=0.326 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcc--cc-ccc---CCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM-ESF---GTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~--a~-~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
.++.++|||||+||+|+|++++|++++ .+||++...+.. .. +.. ...++++.+|++|...+..|++|+ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 356789999999999999999999998 899999876642 11 111 467999999999999999999999 777
Q ss_pred Ec-C-------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 169 CP-S-------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~-a-------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|+ + .|+ ++++|++.||+|+||+||..|..
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVF 131 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEe
Confidence 76 2 243 89999999999999999998864
No 46
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.54 E-value=1.5e-14 Score=124.45 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=68.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HH-HHHhhc-----CccEEEEcC
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPS 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~s-L~~AL~-----GvDaVIh~a 171 (198)
+|||||||||||+|++++|+++|++|++++|+....... ..++.+|+.|. +. +.++++ ++|+|||++
T Consensus 1 ~ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred CEEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 589999999999999999999999999888876432111 12334555554 33 344443 699999972
Q ss_pred ------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.++ +|||+||.+||+
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg 121 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYG 121 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhC
Confidence 112 8899999998 699999999886
No 47
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.54 E-value=4.7e-14 Score=123.53 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=74.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEE-EEEeCCc--c---ccccc-CCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK-ALVKDKR--N---AMESF-GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~Vr-alvR~~~--~---a~~~~-g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
++|||||||||||++++++|+++|++++ ++.|... . ..... +..++++.+|++|++++.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 4799999999999999999999998744 4443221 1 11111 2357889999999999999996 48999998
Q ss_pred C--------------------hhH--HHHHHHhC---------CCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLK---------GVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~---------GVkRiV~vSS~~Vy~ 197 (198)
+ .|+ ++++|++. ++++|||+||..+|.
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg 138 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYG 138 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcC
Confidence 2 122 78888763 688999999998885
No 48
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.53 E-value=4.5e-14 Score=119.62 Aligned_cols=81 Identities=17% Similarity=0.301 Sum_probs=70.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC-------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a------- 171 (198)
+|||||||||||++++++|+++||+|++++|. .+|+.|++.+.++++++ |+|||++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999999999999884 47999999999999987 9999972
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.++ ||||+||.+||.
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~ 105 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFD 105 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeec
Confidence 012 6788888886 899999999884
No 49
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.51 E-value=5.6e-14 Score=127.21 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=83.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-------cccccccC--CceEEEEccCCCHHHHHHhhc--CccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAMESFG--TYVESMAGDASNKKFLKTALR--GVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-------~~a~~~~g--~~vevV~GDl~D~~sL~~AL~--GvDaV 167 (198)
.++||||||+||||+|.+.+|+++|+.|.++.-=. .+.....+ ..++++++|++|.++|++.++ ..|+|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 35899999999999999999999999999997311 11223334 679999999999999999996 45999
Q ss_pred EEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceecC
Q 029118 168 ICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVCL 198 (198)
Q Consensus 168 Ih~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~~ 198 (198)
+|.+ .|+ ++++|++++++++||.||.+||++
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~ 134 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGL 134 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecC
Confidence 9972 133 899999999999999999999974
No 50
>PLN02996 fatty acyl-CoA reductase
Probab=99.51 E-value=8.6e-14 Score=130.62 Aligned_cols=101 Identities=14% Similarity=0.235 Sum_probs=80.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCccc--ccc----------c---------------CCceEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--MES----------F---------------GTYVES 146 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a--~~~----------~---------------g~~vev 146 (198)
-.+++|||||||||+|+++++.|+..+. +|.+++|+.... .+. + ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 4567899999999999999999998654 578999976421 100 1 146899
Q ss_pred EEccCC-------CHHHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 147 MAGDAS-------NKKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 147 V~GDl~-------D~~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
+.||++ |.+.+.++++++|+|||++ .|+ ++++|++. ++++|||+||..||+
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG 166 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG 166 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence 999998 5566788899999999982 122 78999875 899999999999985
No 51
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.51 E-value=1.4e-13 Score=116.80 Aligned_cols=97 Identities=23% Similarity=0.294 Sum_probs=77.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-----CceEEEEccCCCHHHHHHhhc--CccEEEEcC--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-----~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (198)
+||||||||+||++++++|+++|++|+++.|.......... ..++++.+|++|++.+.++++ ++|.|||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999999999999987653322111110 147889999999999999996 689999982
Q ss_pred ------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|.+.++++||++||.++|.
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g 126 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYG 126 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcC
Confidence 011 67889999999999999988774
No 52
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.50 E-value=6.4e-14 Score=119.20 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=69.1
Q ss_pred EEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC---------
Q 029118 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--------- 171 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a--------- 171 (198)
||||||||||++++++|+++|++|+++.+. ..+|++|++++.++++ ++|+|||++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999999998866432 2489999999999987 469999982
Q ss_pred ------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++|+||+||..||.
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg 106 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYP 106 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecC
Confidence 011 78999999999999999999985
No 53
>PRK12320 hypothetical protein; Provisional
Probab=99.49 E-value=1.5e-13 Score=134.76 Aligned_cols=89 Identities=21% Similarity=0.370 Sum_probs=76.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++++++|+++||+|++++|.+... ..++++++.+|++|+. +.+++.++|+|||++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 4799999999999999999999999999999876432 2346899999999985 889999999999982
Q ss_pred ----hhH--HHHHHHhCCCCeEEEEccc
Q 029118 172 ----EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ----~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
.|+ ++++|+++|+ ||||+||.
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~ 103 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQA 103 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECC
Confidence 122 8999999998 79999986
No 54
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.49 E-value=2.3e-13 Score=113.05 Aligned_cols=97 Identities=20% Similarity=0.131 Sum_probs=78.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-CccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-GVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-GvDaVIh~a 171 (198)
+++||||||||+||++++++|+++|++|++++|++..... ..+..++++.+|++|++++.+++. ++|.|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 3579999999999999999999999999999998654321 123468999999999999999987 899999962
Q ss_pred ------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 172 ------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+. +++++++++.+|||++||.+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAG 135 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhh
Confidence 011 345566778899999999643
No 55
>PRK05865 hypothetical protein; Provisional
Probab=99.49 E-value=1.7e-13 Score=136.71 Aligned_cols=91 Identities=14% Similarity=0.302 Sum_probs=79.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++++++|+++|++|++++|+.... ...+++++.+|++|++.+.++++++|+|||++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 4799999999999999999999999999999975332 22358899999999999999999999999983
Q ss_pred ---hhH--HHHHHHhCCCCeEEEEccc
Q 029118 172 ---EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ---~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
.++ ++++|+++|++||||+||.
T Consensus 78 vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 78 INIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 122 7899999999999999986
No 56
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.49 E-value=2.4e-13 Score=114.49 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=78.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-------ccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaVIh~a 171 (198)
+++++||||||+||++++++|.++|++|++++|+++..... .+++++++|++|+++++++++. +|.|||++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 45799999999999999999999999999999987654322 4589999999999999999874 69999982
Q ss_pred ----h--------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ----~--------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. +. +++.+++++.+|||++||...+
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 136 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGF 136 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCcccc
Confidence 0 11 3344677899999999997543
No 57
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.48 E-value=3e-13 Score=111.94 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=79.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||||+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++.++++ ++|
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 83 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD 83 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999987653211 24568899999999999988876 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|||++ .+. +++++++.++++||++||...+
T Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~ 144 (258)
T PRK12429 84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL 144 (258)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 999972 011 4566677889999999997543
No 58
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.48 E-value=1.4e-13 Score=117.48 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=72.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc----CccEEEEcC-----
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----- 171 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~----GvDaVIh~a----- 171 (198)
|||||||||||++++++|+++|+ +|.++.|...... ........+.+|+++.+.++.+.+ ++|+|||++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 69999999999999999999998 6887776543221 111112467889999988887764 899999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|+++++ +|||+||.+||.
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~ 119 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYG 119 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcC
Confidence 112 7899998887 899999999985
No 59
>PRK06182 short chain dehydrogenase; Validated
Probab=99.48 E-value=2.6e-13 Score=114.90 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=80.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh~a 171 (198)
+++++||||||+||++++++|+++|++|.++.|++++.......+++++.+|++|++++.++++ ++|.|||++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5789999999999999999999999999999999876544333458999999999999998886 789999972
Q ss_pred ----h--------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----~--------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
. +. +++.+++.+..|||++||.+.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~ 136 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGG 136 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhh
Confidence 0 11 455677788899999999653
No 60
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.45 E-value=1.7e-13 Score=116.28 Aligned_cols=90 Identities=19% Similarity=0.238 Sum_probs=62.9
Q ss_pred EEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcc--cccc-----------------cCCceEEEEccCCCH------HH
Q 029118 104 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AMES-----------------FGTYVESMAGDASNK------KF 156 (198)
Q Consensus 104 VTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~--a~~~-----------------~g~~vevV~GDl~D~------~s 156 (198)
|||||||+|++++++|++++. +|.+++|..+. +.+. ...+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999987 89999998743 1111 156899999999985 46
Q ss_pred HHHhhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEccc
Q 029118 157 LKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 157 L~~AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
+....+.+|+|||++ .|+ +++.|.+...++|+|+||.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa 136 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTA 136 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEG
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccc
Confidence 667778999999982 233 8899998888899999994
No 61
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.45 E-value=5.8e-13 Score=110.72 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
..++++|||||||+||++++++|+++|++|+++.|++++..+ ..+..+.++++|++|++.+.++++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 346789999999999999999999999999999998754321 1234578899999999999888763
Q ss_pred ccEEEEcC------------------------hhH------HHHHH-HhCCCCeEEEEcccce
Q 029118 164 VRSIICPS------------------------EGF------ISNAG-SLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------------------~G~------lldAA-~~~GVkRiV~vSS~~V 195 (198)
+|+|||++ .+. +++++ ++.++++||++||...
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~ 147 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHS 147 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhh
Confidence 89999972 010 45666 6778999999999744
No 62
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.45 E-value=7.2e-13 Score=109.49 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=74.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHh-------hcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTA-------LRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~A-------L~GvDa 166 (198)
+++|||||||+||++++++|+++|++|+++.|+++..... .+.+++++.+|+.|++++.++ +.++|.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5799999999999999999999999999999987543211 234688999999999966544 456899
Q ss_pred EEEcC------------------------hhH--H----HHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS------------------------EGF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ .+. + ++.+++.++++||++||.+.+
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~ 141 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGL 141 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 99972 011 2 333467789999999997543
No 63
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.45 E-value=7.1e-13 Score=108.01 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
+++++|||||||+||++++++|+++|++|+++.|++.+.. ......++++.+|+.|.+++.++++ ++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4679999999999999999999999999999999875532 1223457889999999999988876 6899
Q ss_pred EEEcCh------------------------hH--HHHH----HHhCCCCeEEEEcccceec
Q 029118 167 IICPSE------------------------GF--ISNA----GSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 167 VIh~a~------------------------G~--lldA----A~~~GVkRiV~vSS~~Vy~ 197 (198)
|||++. +. ++++ +++.++++||++||.+.+.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK 146 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc
Confidence 999720 01 3333 3467899999999987653
No 64
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.44 E-value=4.9e-13 Score=113.18 Aligned_cols=96 Identities=14% Similarity=0.246 Sum_probs=76.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
+++|||||||+||++++++|+++|++|.+++|+++.... ..+.+++++.+|++|++++.++++ ++|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999999999998755432 234568999999999999888764 5799999
Q ss_pred cC------------------------hhH--HHHHH----HhCCCCeEEEEcccce
Q 029118 170 PS------------------------EGF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 170 ~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
++ .++ +++++ ++++.++||++||.+.
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 138 (276)
T PRK06482 83 NAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGG 138 (276)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence 72 011 44554 6778899999999754
No 65
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.44 E-value=3.6e-13 Score=113.34 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=67.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-----h----
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-----E---- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-----~---- 172 (198)
|||||||||||++++++|+++|++|++++|++.+........+ .|+.+ ..+.+++.++|+|||++ .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGY----KPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceee----ecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 6999999999999999999999999999998865432211111 12222 55678899999999982 0
Q ss_pred -------------hH--HHHHHHhCCCC--eEEEEcccceec
Q 029118 173 -------------GF--ISNAGSLKGVQ--HVILLSQGAVVC 197 (198)
Q Consensus 173 -------------G~--lldAA~~~GVk--RiV~vSS~~Vy~ 197 (198)
++ ++++|++++++ +||+.|+.++|.
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg 117 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYG 117 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeC
Confidence 01 78899999985 566667777775
No 66
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.44 E-value=6.3e-13 Score=109.58 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.++++|||||||+||++++++|+++|++|++++|++.+.... . +..+.++.+|+.|++++.++++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 456899999999999999999999999999999987653221 1 2457899999999999998875 469
Q ss_pred EEEEcC-----h--------------------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS-----E--------------------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a-----~--------------------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ . ++ +++++++.+.++||++||.+.+.
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR 146 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC
Confidence 999972 0 00 34555567889999999987653
No 67
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.42 E-value=1e-12 Score=111.88 Aligned_cols=98 Identities=11% Similarity=0.156 Sum_probs=77.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
++++|||||+|+||++++++|+++|++|++++|++++... ..+.++.++.+|++|++++.++++ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 4689999999999999999999999999999998765432 223468899999999999988876 579999
Q ss_pred EcC----h--------------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 169 CPS----E--------------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a----~--------------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
|++ . |+ ++++ +++.+..+||++||.+.+
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~ 141 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL 141 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc
Confidence 982 0 11 2333 456678899999997553
No 68
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.42 E-value=1.6e-12 Score=106.08 Aligned_cols=99 Identities=17% Similarity=0.255 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++||||||||+||++++++|+++|++|.++.|+..... ...+.+++++.+|+.|++++.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999988887654321 1234568899999999999988875 5
Q ss_pred ccEEEEcC------h------------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------E------------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------~------------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . +. ++++ +++.++++||++||.+.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~ 147 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL 147 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccC
Confidence 69999972 0 00 2333 467789999999998664
No 69
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.41 E-value=1.7e-12 Score=107.30 Aligned_cols=98 Identities=14% Similarity=0.157 Sum_probs=78.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..++++.+|++|++++.++++ .+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999999987543211 13457899999999999998875 689
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|||++ + +. +++++++++.++||++||.+.
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~ 143 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA 143 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhh
Confidence 999972 0 11 345556778899999999744
No 70
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.41 E-value=1e-12 Score=112.13 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=79.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--------GvDaVIh~ 170 (198)
++++|||||+|+||++++++|.++|++|.+++|+++........+++++.+|++|++++.++++ .+|.|||+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~ 83 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN 83 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence 4689999999999999999999999999999998876544333468899999999998887765 46999987
Q ss_pred C------------------------hh------HHHHHHHhCCCCeEEEEccccee
Q 029118 171 S------------------------EG------FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 171 a------------------------~G------~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+ .| .+++++++.+..+||++||...+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~ 139 (277)
T PRK05993 84 GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL 139 (277)
T ss_pred CCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc
Confidence 2 01 15666778889999999997543
No 71
>PRK08264 short chain dehydrogenase; Validated
Probab=99.41 E-value=3.3e-12 Score=105.24 Aligned_cols=98 Identities=17% Similarity=0.247 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc---CccEEEEcC-h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPS-E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~a-~ 172 (198)
..+++|||||||+||++++++|+++|+ +|++++|++++... .+.+++++.+|+.|++.+.++++ .+|+|||.+ .
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 456899999999999999999999999 99999998876543 45678999999999999998886 479999972 0
Q ss_pred ------------------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 173 ------------------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 173 ------------------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+. ++++ +++.+..+||++||...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~ 137 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW 137 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence 00 2333 445678999999997654
No 72
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.41 E-value=1.9e-12 Score=106.44 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++||||||+|++|++++++|+++|++|++++|++++... ..+..++++.+|+.|++++.++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999999999999998654321 123458899999999999999886 67
Q ss_pred cEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
|+|||++ . +. ++++ +++.+.++||++||...+
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 9999982 0 00 3333 356788999999997654
No 73
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.39 E-value=2.6e-12 Score=104.90 Aligned_cols=97 Identities=14% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------c
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G-------v 164 (198)
++++||||||+|+||++++++|+++|++|.++.|++.+... ..+..++++.+|+.|++++.+++++ +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999999999998765321 1244688999999999999888765 5
Q ss_pred cEEEEcC----h--------------------hH--HHHHH----HhCCCCeEEEEcccc
Q 029118 165 RSIICPS----E--------------------GF--ISNAG----SLKGVQHVILLSQGA 194 (198)
Q Consensus 165 DaVIh~a----~--------------------G~--lldAA----~~~GVkRiV~vSS~~ 194 (198)
|+|||++ . +. +++++ .+.++++||++||.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~ 143 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVS 143 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHH
Confidence 9999972 0 00 23333 567889999999964
No 74
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.39 E-value=1.7e-12 Score=125.54 Aligned_cols=102 Identities=15% Similarity=0.189 Sum_probs=79.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCccc--cccc-------------------------CCceE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--MESF-------------------------GTYVE 145 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a--~~~~-------------------------g~~ve 145 (198)
-...++|||||||||+|.+++++|++.+. +|.+++|..... .+.+ ...++
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 34578999999999999999999998765 679999965321 1110 13588
Q ss_pred EEEccCCCH------HHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 146 SMAGDASNK------KFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 146 vV~GDl~D~------~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
++.||++++ +..+.+++++|.|||++ .|+ ++++|++. ++++|||+||..||+
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG 273 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG 273 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence 999999997 46666778899999982 122 78999776 589999999999886
No 75
>PRK09186 flagellin modification protein A; Provisional
Probab=99.39 E-value=2.7e-12 Score=106.62 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhcC------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
.++++|||||+|+||++++++|+++|++|+++.|++++..+. .+..+.++++|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999987653211 123467789999999999888864
Q ss_pred -ccEEEEcCh---------------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPSE---------------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a~---------------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++. +. +++++++.+.+|||++||...
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 148 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYG 148 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence 799998730 00 345566678899999999643
No 76
>PRK06194 hypothetical protein; Provisional
Probab=99.39 E-value=3.7e-12 Score=108.17 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999976543211 13457889999999999998886 47
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 85 d~vi~~ 90 (287)
T PRK06194 85 HLLFNN 90 (287)
T ss_pred CEEEEC
Confidence 999997
No 77
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.38 E-value=4.1e-12 Score=106.18 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=77.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
|+|+||||||+||.+++++|+++|++|.++.|++++... ..+.+++++.+|++|.+++.++++ ++|.|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999999999998765432 234568899999999999988774 7899998
Q ss_pred cC---h----------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 170 PS---E----------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a---~----------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ . ++ ++.++++.+..+||++||.+.+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 138 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS 138 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC
Confidence 72 0 11 3455667788999999997643
No 78
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.38 E-value=3e-12 Score=110.79 Aligned_cols=102 Identities=16% Similarity=0.200 Sum_probs=79.8
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c---c-CCceEEEEccCCCHHHHHHhhc---
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S---F-GTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~---~-g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
..+..+++||||||+|+||++++++|+++|++|+++.|+.++... . . +..++++.+|++|.++++++++
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 345567899999999999999999999999999999998654321 1 1 2458899999999999988764
Q ss_pred ----CccEEEEcC-----------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 ----GVRSIICPS-----------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 ----GvDaVIh~a-----------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+|+|||++ + +. +++.+++.+..|||++||.+.
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~ 155 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGH 155 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHH
Confidence 579999972 0 10 456666777789999999753
No 79
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.38 E-value=1.4e-12 Score=116.54 Aligned_cols=95 Identities=20% Similarity=0.327 Sum_probs=71.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc---ccc-----CCce----EEEEccCCCHHHHHHhhc--CccE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM---ESF-----GTYV----ESMAGDASNKKFLKTALR--GVRS 166 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~---~~~-----g~~v----evV~GDl~D~~sL~~AL~--GvDa 166 (198)
||||||+|.||+.++++|++.+. +++++.|+..+.. ..+ .+++ ..+.||++|++.+..+++ ++|.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999884 6999998875431 112 1234 356999999999999999 9999
Q ss_pred EEEcC--------------------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||.+ .|+ ++++|.+++|+|||++||--+.
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv 132 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV 132 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC
Confidence 99982 233 8999999999999999996543
No 80
>PLN02778 3,5-epimerase/4-reductase
Probab=99.38 E-value=3.1e-12 Score=111.97 Aligned_cols=82 Identities=12% Similarity=0.122 Sum_probs=63.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (198)
....++|||||||||||++++++|+++|++|++.. +|+.|.+.+...++ ++|+|||++
T Consensus 6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 6 GSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 34457899999999999999999999999987432 34566677777776 789999982
Q ss_pred ----h-----------------hH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 ----E-----------------GF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ----~-----------------G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. ++ ++++|++.|+++ |++||.+||
T Consensus 68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy 114 (298)
T PLN02778 68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIF 114 (298)
T ss_pred cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEe
Confidence 0 11 789999999975 556666776
No 81
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.38 E-value=4.2e-12 Score=104.84 Aligned_cols=99 Identities=15% Similarity=0.239 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||||+||++++++|+++|++|.+++|+....... .+.+++++.+|++|.++++++++ ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 367899999999999999999999999999999987543211 23568999999999999988875 58
Q ss_pred cEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.|||++ . +. + ++++++.+.++||++||.+.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~ 143 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR 143 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc
Confidence 9999972 0 00 2 333446788999999998665
No 82
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.37 E-value=6.6e-12 Score=102.97 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=76.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc------CccEEEEcC-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~------GvDaVIh~a- 171 (198)
.+++|||||||+||++++++|+++|++|.++.|++... .+ .+++.+|++|++++.++++ ++|.|||++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---FP--GELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---cC--ceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 46899999999999999999999999999999987652 12 3688999999999988876 789999972
Q ss_pred ------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 172 ------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. +. ++.++++++..+||++||.++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 131 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF 131 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc
Confidence 0 11 3456677889999999998765
No 83
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.37 E-value=5.2e-12 Score=107.67 Aligned_cols=103 Identities=16% Similarity=0.208 Sum_probs=78.3
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
|.+..++++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..++++.+|++|++++.++++
T Consensus 5 ~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 5 EPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 345667899999999999999999999999999999987654321 123467889999999999988775
Q ss_pred --CccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 --GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|+|||++ . ++ ++++ +.+.+..+||++||...|
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~ 150 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVAL 150 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhc
Confidence 579999972 0 01 2233 345667899999997654
No 84
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.37 E-value=8e-12 Score=102.08 Aligned_cols=97 Identities=18% Similarity=0.257 Sum_probs=74.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||||+||++++++|+++|++|+++.|++.+.. ...+..+.++.+|++|++++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999988764311 1123467889999999999988775 6
Q ss_pred ccEEEEcC-------------h-----------hH--HH----HHHHhCCCCeEEEEcccc
Q 029118 164 VRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~ 194 (198)
+|+|||++ . +. ++ +++.+.+.++||++||..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~ 144 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVV 144 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccc
Confidence 79999972 0 01 23 334456788999999963
No 85
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.37 E-value=4.4e-12 Score=104.22 Aligned_cols=98 Identities=20% Similarity=0.286 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++|+||||||+||++++++|+++|++|++++|++.+.... .. .+++++.+|++|++++.++++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899999999999999999999999999999988653221 11 458899999999999988876 789
Q ss_pred EEEEcC----h--------------------hH--HHHHHH---hCCCCeEEEEcccce
Q 029118 166 SIICPS----E--------------------GF--ISNAGS---LKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a----~--------------------G~--lldAA~---~~GVkRiV~vSS~~V 195 (198)
+|||++ . +. +++++. ..+.++||++||...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 143 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG 143 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhh
Confidence 999972 0 00 333432 246689999999754
No 86
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.36 E-value=6.4e-12 Score=103.84 Aligned_cols=98 Identities=18% Similarity=0.252 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..+++|||||+|+||++++++|+++|++|++++|++.+..+ ..+.+++++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35789999999999999999999999999999998754321 123468899999999999998886 78
Q ss_pred cEEEEcC----h--------------------hH--HHH----HHHhCCCCeEEEEcccce
Q 029118 165 RSIICPS----E--------------------GF--ISN----AGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a----~--------------------G~--lld----AA~~~GVkRiV~vSS~~V 195 (198)
|+|||++ . +. +++ .+.+.+.+++|++||...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~ 146 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAG 146 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhh
Confidence 9999972 0 00 233 334678899999999654
No 87
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.36 E-value=3.3e-12 Score=103.80 Aligned_cols=71 Identities=13% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
++++|||||+|+||++++++|+++ ++|.++.|++....... ...++++++|++|++.+.++++ ++|+|||+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 468999999999999999999999 99999999875532211 2358899999999999999987 58999997
No 88
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.36 E-value=4.6e-12 Score=107.61 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=77.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
+++||||||+|+||++++++|+++|++|++++|+++... ...+..+.++++|++|++++.++++ ++|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999999999999999876542 2234468889999999999887765 569999
Q ss_pred EcC----h--------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 169 CPS----E--------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a----~--------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|++ . ++ ++..+++.+.++||++||.+.+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~ 140 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGI 140 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence 982 0 11 2333467788999999997654
No 89
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.36 E-value=8.1e-12 Score=103.52 Aligned_cols=98 Identities=13% Similarity=0.197 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||||+||++++++|+++|++|+++.|+.... . ...+.++.++.+|++|++.+.++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999975421 1 1123457889999999999988775 6
Q ss_pred ccEEEEcC------------------hhH--HHHHHHhC--CCCeEEEEcccce
Q 029118 164 VRSIICPS------------------EGF--ISNAGSLK--GVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------------~G~--lldAA~~~--GVkRiV~vSS~~V 195 (198)
+|+|||++ .++ +++++... .-.+||++||.++
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 138 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA 138 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh
Confidence 89999872 011 56666543 2359999999543
No 90
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.36 E-value=6.3e-12 Score=104.04 Aligned_cols=98 Identities=16% Similarity=0.224 Sum_probs=74.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||+|+||++++++|+++|++|+++ +|+..+..+ ..+.++.++.+|++|++++.++++ ++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999998874 676643211 124568899999999999988876 57
Q ss_pred cEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|+|||.+ . +. + ++++++.+.++||++||.+.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 145 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI 145 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 9999972 0 11 2 333445677899999997553
No 91
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.35 E-value=4.6e-12 Score=104.80 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=77.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||+|+||++++++|+++|++|+++.|++++.... .+.++.++.+|++|++++.++++ .+|
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD 85 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999987653221 23468899999999999888875 479
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.|||++ . +. +++.+++.+..+||++||...+
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 146 (241)
T PRK07454 86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR 146 (241)
T ss_pred EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC
Confidence 999972 0 11 2344456677899999998664
No 92
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.34 E-value=1.5e-11 Score=100.95 Aligned_cols=99 Identities=19% Similarity=0.246 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc----cc------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~----a~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.++++|||||+|+||++++++|+++|++|++++|...+ .. ...+..++++.+|+.|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999998764321 11 1123468899999999999988873
Q ss_pred --CccEEEEcC---h---------------------hH--HHHHHH-----hCCCCeEEEEccccee
Q 029118 163 --GVRSIICPS---E---------------------GF--ISNAGS-----LKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a---~---------------------G~--lldAA~-----~~GVkRiV~vSS~~Vy 196 (198)
++|+|||++ . +. +++++. +.+.++||++||.+.+
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~ 151 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV 151 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc
Confidence 689999972 0 11 455555 5788999999997654
No 93
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.34 E-value=9.2e-12 Score=103.36 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=75.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhc-----------CccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~-----------GvDa 166 (198)
++++|||||||+||++++++|+++|++|.+++|+..+.. ...+.+++++++|++|++++.++++ ..|.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 358999999999999999999999999999999865422 2234568899999999999988543 3578
Q ss_pred EEEcC-------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS-------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+||++ .+. +++.+.+.+..+||++||.+.+
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 141 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR 141 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc
Confidence 88861 011 2344455677899999997654
No 94
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.34 E-value=8.9e-12 Score=104.37 Aligned_cols=101 Identities=19% Similarity=0.247 Sum_probs=76.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+...+++|||||+|+||++++++|+++|++|.++.|+.++... ..+.++.++.+|++|++++.++++
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3456799999999999999999999999999999998654321 123457889999999999977664
Q ss_pred CccEEEEcC-------------h-----------hH--HHHHHH-----hCCCCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF--ISNAGS-----LKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~--lldAA~-----~~GVkRiV~vSS~~Vy 196 (198)
.+|+|||++ . +. +++++. +++..+||++||.+.+
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~ 153 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL 153 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc
Confidence 579999982 0 11 455443 3478899999996543
No 95
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.33 E-value=6.2e-12 Score=106.30 Aligned_cols=98 Identities=18% Similarity=0.120 Sum_probs=76.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
.++++|||||||.||++++++|+++|++|+++.|++++..... -..++++.+|++|++++.++++ ++|.+|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3578999999999999999999999999999999876543211 1247899999999999876663 579999
Q ss_pred EcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 169 CPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 169 h~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
|++ .+. ++..+++.+..|||++||.+.
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 140 (273)
T PRK07825 84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAG 140 (273)
T ss_pred ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccc
Confidence 872 000 345567788999999999754
No 96
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.33 E-value=8.4e-12 Score=104.58 Aligned_cols=96 Identities=18% Similarity=0.126 Sum_probs=75.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc----cCCceEEEEccCCCHHHHHHhhc--------CccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR--------GVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~----~g~~vevV~GDl~D~~sL~~AL~--------GvDa 166 (198)
++++|||||||+||++++++|+++|++|.++.|++++..+. .+..++++.+|++|.+.+.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 46899999999999999999999999999999988654321 13568999999999999988875 4599
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEcccc
Q 029118 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGA 194 (198)
Q Consensus 167 VIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~ 194 (198)
|||++ . +. ++++ ++..+..+||++||..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~ 138 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSAS 138 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchh
Confidence 99972 0 01 2333 3456778999999964
No 97
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.33 E-value=9.5e-12 Score=105.30 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=73.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHH------hhcCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKT------ALRGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~------AL~Gv 164 (198)
++++|||||||+||++++++|+++|++|++++|+++..... .+..++++.+|++|++++.+ .+..+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 45799999999999999999999999999999987543211 12468999999999998775 12357
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
|.|||++ . ++ +++++++.+..+||++||.+.
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~ 143 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG 143 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 9999972 0 11 233356778899999999643
No 98
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.33 E-value=1.2e-11 Score=103.34 Aligned_cols=100 Identities=14% Similarity=0.198 Sum_probs=77.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|++++.++++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3557899999999999999999999999999999998754321 1134578899999999999888754
Q ss_pred -ccEEEEcC-------------h-----------hH--HHHHH----HhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
+|+|||++ + +. +++++ ++.+..+||++||...
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~ 149 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS 149 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh
Confidence 79999972 0 11 33433 3457889999999754
No 99
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.3e-11 Score=102.63 Aligned_cols=100 Identities=16% Similarity=0.146 Sum_probs=73.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc----c--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME----S--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~----~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...++|+||||||+||++++++|+++|++|.++ .|+.++... . .+..++++.+|++|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 345789999999999999999999999999886 465543211 1 13458899999999999988876
Q ss_pred ------CccEEEEcC----h--------------------hH--HHHHHHh--CCCCeEEEEccccee
Q 029118 163 ------GVRSIICPS----E--------------------GF--ISNAGSL--KGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ------GvDaVIh~a----~--------------------G~--lldAA~~--~GVkRiV~vSS~~Vy 196 (198)
++|+|||++ . ++ +++++.. ....+||++||..++
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~ 151 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR 151 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc
Confidence 589999972 0 11 3344432 233699999997664
No 100
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.5e-11 Score=101.86 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=75.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++|||||||+||++++++|+++|++|.++.|++++.... . +..++++.+|++|++++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999987543211 1 3468899999999998877664 6
Q ss_pred ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. +++.+++.+..+||++||...
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 143 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA 143 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 89999972 0 00 223345678899999999643
No 101
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.5e-11 Score=101.87 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|+||++++++|+++|++|.++.|+++..... .+.++.++..|++|++++.++++ .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999986543111 12357789999999999887765 67
Q ss_pred cEEEEcCh---------------------------hH--HHHH----HHhCCCCeEEEEcccceec
Q 029118 165 RSIICPSE---------------------------GF--ISNA----GSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a~---------------------------G~--lldA----A~~~GVkRiV~vSS~~Vy~ 197 (198)
|.|||++. +. ++++ ..+.+.++||++||.++|.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL 150 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence 99999720 00 2333 3345678999999987653
No 102
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.32 E-value=1e-11 Score=105.61 Aligned_cols=91 Identities=13% Similarity=0.214 Sum_probs=79.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc---C-hh--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP---S-EG-- 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~---a-~G-- 173 (198)
|+|.|.||||.+|++++++++.+||+|+++|||+++.... +++.+++.|+.|++++.+.+.|.|+||.. . .+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 6899999999999999999999999999999999887554 56889999999999999999999999976 1 11
Q ss_pred --------HHHHHHHhCCCCeEEEEcc
Q 029118 174 --------FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 --------~lldAA~~~GVkRiV~vSS 192 (198)
.++++.+.+|+.|++.+.-
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGG 105 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGG 105 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence 1777888889999998853
No 103
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.32 E-value=1.1e-11 Score=101.73 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..+++||||||||+||++++++|+++|++|.++ .|++++... ..+..+.++.+|++|++++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 346789999999999999999999999999999 887654321 123458899999999999988876
Q ss_pred CccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEcccce
Q 029118 163 GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~V 195 (198)
++|+|||.+ . +. + ++..++.+.++||++||.+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~ 145 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWG 145 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhh
Confidence 789999972 0 11 2 23344567889999999643
No 104
>PRK06196 oxidoreductase; Provisional
Probab=99.32 E-value=1e-11 Score=108.19 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHhh-------cCccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTAL-------RGVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~AL-------~GvDaV 167 (198)
..+++||||||||+||++++++|+++|++|+++.|++++...... ..++++.+|++|++++++++ .++|.|
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 346799999999999999999999999999999998765432211 24789999999999998877 368999
Q ss_pred EEcC-----------h-----------hH------HHHHHHhCCCCeEEEEcccc
Q 029118 168 ICPS-----------E-----------GF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 168 Ih~a-----------~-----------G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
||++ . +. ++.++++.+..|||++||.+
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~ 158 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAG 158 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHH
Confidence 9972 0 11 34556667778999999964
No 105
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.3e-11 Score=102.36 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=74.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhcC----ccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----VRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~G----vDaV 167 (198)
+++++||||||+||++++++|+++|++|.+++|++++.... .+.+++++++|++|++.++++++. +|.|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 46899999999999999999999999999999987653211 134689999999999999887764 5899
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCeEEEEcccc
Q 029118 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 168 Ih~a-------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~ 194 (198)
||.+ + +. ++ ..+.+.+..+||++||..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 137 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVA 137 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 9861 0 11 22 334456789999999964
No 106
>PRK06398 aldose dehydrogenase; Validated
Probab=99.31 E-value=3.3e-11 Score=101.86 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.... ..++++++|++|++++.++++ .+|.|||
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4568999999999999999999999999999999876542 257899999999999988875 6899999
Q ss_pred cC------------------------hhH--H----HHHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ .+. + +..+++.+..+||++||...+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 135 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF 135 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc
Confidence 62 011 2 333445677899999997654
No 107
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.1e-11 Score=106.05 Aligned_cols=101 Identities=17% Similarity=0.199 Sum_probs=79.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...+++++||||+|+||++++++|+++|++|.+++|+.+..... .+..+.++.+|++|++++.++++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG 116 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34557899999999999999999999999999999987543211 13457889999999999988887
Q ss_pred CccEEEEcC---------h-----------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS---------E-----------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a---------~-----------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ + +. ++..+++.+..+||++||.+++
T Consensus 117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 182 (293)
T PRK05866 117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVL 182 (293)
T ss_pred CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc
Confidence 789999972 0 00 2334457788999999997654
No 108
>PRK08017 oxidoreductase; Provisional
Probab=99.30 E-value=1.5e-11 Score=102.20 Aligned_cols=96 Identities=17% Similarity=0.129 Sum_probs=75.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--------CccEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--------GvDaVIh~a 171 (198)
++||||||||+||+++++.|+++|++|+++.|++++.......+++++++|++|.+.+.++++ .+|.+||++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 479999999999999999999999999999998865443333457899999999988877653 357788761
Q ss_pred ------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 172 ------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.|+ +++++++.+.++||++||...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 136 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMG 136 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccc
Confidence 011 357777888999999999643
No 109
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.30 E-value=2.3e-11 Score=101.70 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--c---ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~---~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||+|+||++++++|+++|++|.++.|++.... . ..+..+.++.+|++|++++.++++ ++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 34678999999999999999999999999999999753211 1 123457889999999988887765 67
Q ss_pred cEEEEcCh-------------------------h------HHHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPSE-------------------------G------FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a~-------------------------G------~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||++. + .+++.+++.+..+||++||...+
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 148 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR 148 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc
Confidence 99999720 0 03455566788899999998654
No 110
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.30 E-value=2.4e-11 Score=102.76 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=77.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
+++|||||||+||++++++|+++|++|.+++|+.++... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999998755321 124568899999999999888775 6899
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ . +. +++.+++.+..+||++||...+
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 140 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGL 140 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhc
Confidence 99972 0 00 3445667788999999997543
No 111
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.29 E-value=2.9e-11 Score=116.11 Aligned_cols=82 Identities=11% Similarity=0.134 Sum_probs=65.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (198)
..+.|+|||||||||||+++++.|.++|++|.. ..+|++|++.+.+.++ ++|+|||++
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence 445678999999999999999999999998731 1246889999988886 789999982
Q ss_pred -----h----------------hH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 -----E----------------GF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 -----~----------------G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. ++ ++++|++.|++ +|++||..||
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~ 485 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIF 485 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEccccee
Confidence 0 11 78999999996 5677887776
No 112
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.6e-11 Score=101.50 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999999999999999987543211 23468899999999999988775 6
Q ss_pred ccEEEEcC-------------h-----------hH--HHHHHH----h-CCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF--ISNAGS----L-KGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--lldAA~----~-~GVkRiV~vSS~~V 195 (198)
+|+|||++ . +. +.+++. + .+..+||++||...
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~ 150 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMG 150 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence 79999972 0 01 344443 2 56789999999643
No 113
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.8e-11 Score=100.36 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-------ccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaVIh~ 170 (198)
.++++|||||+|.||++++++|+++|++|.++.|++++ ...+..++++++|++|++++.++++. +|.|||+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 82 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 46799999999999999999999999999999998754 22245688999999999999888864 4999996
No 114
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.28 E-value=2.1e-11 Score=101.77 Aligned_cols=96 Identities=18% Similarity=0.149 Sum_probs=75.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----ccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.+++|||||||+||++++++|+++|++|.++.|++++... ..+..++++.+|+.|++++.++++ ++|.|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3589999999999999999999999999999998765321 123458899999999999988886 47999
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCeEEEEcccc
Q 029118 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 168 Ih~a-------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~ 194 (198)
||++ + +. ++ ..+++++..+||++||..
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 138 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVN 138 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchh
Confidence 9982 0 00 22 334567788999999963
No 115
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.28 E-value=4.1e-11 Score=98.44 Aligned_cols=99 Identities=13% Similarity=0.133 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhh-------cCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL-------~GvDa 166 (198)
.+++++|||||||+||++++++|+++|+.|.+..|++++... ..+.+++++.+|++|.+++.+++ .++|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346799999999999999999999999999888887654432 23456889999999999988875 36899
Q ss_pred EEEcC----h--------------------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 167 IICPS----E--------------------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 167 VIh~a----~--------------------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
|||++ . +. ++++ +++++..+||++||.+.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 142 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVG 142 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHh
Confidence 99982 0 11 2333 33457789999999643
No 116
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.28 E-value=2e-11 Score=101.54 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=62.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c-CCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~-g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..+.+++|||||+|+||++++++|+++|++|+++.|+++..... . ...++++.+|++|++++.++++ ++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34668999999999999999999999999999999987543221 1 1146889999999999988774 78
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 88 d~vi~~ 93 (264)
T PRK12829 88 DVLVNN 93 (264)
T ss_pred CEEEEC
Confidence 999997
No 117
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.28 E-value=2.1e-11 Score=102.45 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=76.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhcC-------ccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRG-------VRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~G-------vDa 166 (198)
++++|||||||+||++++++|+++|++|.++.|++++.... .. .++.++.+|++|++++.++++. +|.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999999999999987654221 11 1588999999999999888754 699
Q ss_pred EEEcC---------h----------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 167 IICPS---------E----------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 167 VIh~a---------~----------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+||++ . +. ++.++++.+..+||++||...
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~ 141 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAG 141 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhh
Confidence 99871 0 11 345667778899999999643
No 118
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.28 E-value=2.1e-11 Score=109.99 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=77.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcE--EEEEe-----CCccccccc-CCceEEEEccCCCHHHHHHhhc--CccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRI--KALVK-----DKRNAMESF-GTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~V--ralvR-----~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~--GvDaVIh 169 (198)
+++||||+.||||+++++.++.+..+. .++.+ +.+...... .++..+++||++|.+.+.+.++ .+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 579999999999999999999987654 44443 111211222 3689999999999999999998 5899999
Q ss_pred cC--------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 170 PS--------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
.+ .|+ +++|+++...+ ||+++|+-.||+
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG 131 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYG 131 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccc
Confidence 72 233 89999998875 999999999986
No 119
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.7e-11 Score=117.52 Aligned_cols=98 Identities=22% Similarity=0.350 Sum_probs=82.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc-------cccC-CceEEEEccCCCHHHHHHhhcC--c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM-------ESFG-TYVESMAGDASNKKFLKTALRG--V 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~-------~~~g-~~vevV~GDl~D~~sL~~AL~G--v 164 (198)
-..+++||||||+|-||+.+++++++.+. +++.+.|+..+.. ..++ ..+.++.||+.|.+.+..++++ +
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 56688999999999999999999999885 6777788875431 1122 4578899999999999999999 9
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCCeEEEEccc
Q 029118 165 RSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 165 DaVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
|.|||++ .|+ +++||.++||++||++|+-
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD 377 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD 377 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecC
Confidence 9999982 233 8999999999999999995
No 120
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.28 E-value=2.2e-11 Score=112.14 Aligned_cols=98 Identities=21% Similarity=0.269 Sum_probs=79.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcc--cc--------------cccCCceEEEEccCC------CHHH
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--AM--------------ESFGTYVESMAGDAS------NKKF 156 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~--a~--------------~~~g~~vevV~GDl~------D~~s 156 (198)
++||+||||||+|++++++|+.+-. +|.|+||-.+. +. +....+++++.||+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999999865 99999996541 11 123467999999998 4667
Q ss_pred HHHhhcCccEEEEc-C----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 157 LKTALRGVRSIICP-S----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 157 L~~AL~GvDaVIh~-a----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+.+..+.+|.|||+ + .|+ +++.|.....|.+.|+||++|+.
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~ 140 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGE 140 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeecc
Confidence 77777889999998 2 244 78888888899999999999863
No 121
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.27 E-value=5.2e-11 Score=98.11 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------cCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RGV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~Gv 164 (198)
..++++||||+|.||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.+++ .++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999988764321 12346899999999999998887 368
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 86 d~vi~~ 91 (250)
T PRK12939 86 DGLVNN 91 (250)
T ss_pred CEEEEC
Confidence 999997
No 122
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.26 E-value=3.7e-11 Score=98.51 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=73.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+++|||||||+||++++++|+++|++|.++.| ++..... ..+.++.++.+|++|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47999999999999999999999999999998 4332211 123468899999999999887764 479
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
.|||++ .+. ++.++++.++.+||++||..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 139 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVN 139 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence 999972 000 34556677889999999964
No 123
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.26 E-value=5.5e-11 Score=99.61 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...+++|||||+|+||++++++|+++|++|.++.|+++..... .+..+.++++|++|++.+.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999987543211 23457899999999999988875
Q ss_pred -CccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|++||++ . +. + +..+++.+..+||++||...+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 149 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF 149 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc
Confidence 689999972 0 00 2 233445667899999997543
No 124
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.26 E-value=5.7e-11 Score=97.59 Aligned_cols=97 Identities=19% Similarity=0.147 Sum_probs=75.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-ccc------ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+++|||||+|+||++++++|+++|++|+++.|++.. ... ..+..+.++.+|++|++++.++++ .+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999999998531 111 112458899999999999988875 479
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.|||++ + +. +++++++.+..+||++||...+
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~ 143 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL 143 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhc
Confidence 999972 0 11 3455677788999999997654
No 125
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.26 E-value=4.7e-11 Score=100.89 Aligned_cols=99 Identities=16% Similarity=0.199 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c--CCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~--g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++|||||+|+||++++++|+++|++|.++.|++++.... . +.++.++.+|++|++.+.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457999999999999999999999999999999986543211 1 2467889999999999988876
Q ss_pred CccEEEEcCh-------------------------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 GVRSIICPSE-------------------------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a~-------------------------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++. +. +++++ .+.+-.+||++||..++
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~ 150 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS 150 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 6899999720 00 33333 33456799999998664
No 126
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.26 E-value=2.9e-11 Score=99.61 Aligned_cols=73 Identities=21% Similarity=0.262 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
.+++++||||+|+||+++++.|+++|++|+++.|++++..+.. ..+++++.+|++|++.+.++++ .+|+|||+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 4578999999999999999999999999999999876543221 1236789999999999988886 48999997
No 127
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.26 E-value=3.4e-11 Score=100.14 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||||+||++++++|+++|++|.++.|++...... .+..++++..|++|++++.++++ .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 457899999999999999999999999999999987543221 13457899999999999887774 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 84 d~vi~~ 89 (258)
T PRK07890 84 DALVNN 89 (258)
T ss_pred cEEEEC
Confidence 999997
No 128
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.26 E-value=9.1e-11 Score=98.10 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=76.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-------cCccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaVI 168 (198)
+..++++|||||+|+||++++++|.++|++|.++.|+.... .+..+.++++|++|++.+.+++ .++|.||
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34568999999999999999999999999999999986542 2345889999999999877654 4679999
Q ss_pred EcCh--------------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 169 CPSE--------------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a~--------------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|++. +. +++.+++.+..+||++||...+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 142 (260)
T PRK06523 83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR 142 (260)
T ss_pred ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc
Confidence 8620 11 2344556677899999997654
No 129
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.25 E-value=8.3e-11 Score=97.48 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-------ccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaVIh 169 (198)
..++++|||||+|+||++++++|+++|++|.++.|++. ...+..++++++|++|++++.++++. +|.|||
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL---TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh---hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 44678999999999999999999999999999999871 22345688999999999999998864 799999
Q ss_pred cC----h--------------------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 170 PS----E--------------------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 170 ~a----~--------------------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
++ . +. ++++ .++.+..+||++||.+.
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~ 138 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA 138 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh
Confidence 72 0 00 3334 34566789999999654
No 130
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.25 E-value=3.7e-11 Score=122.39 Aligned_cols=99 Identities=19% Similarity=0.259 Sum_probs=79.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC----CcEEEEEeCCcccc--cc--------------cCCceEEEEccCCC-----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAM--ES--------------FGTYVESMAGDASN----- 153 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G----~~VralvR~~~~a~--~~--------------~g~~vevV~GDl~D----- 153 (198)
.++|||||||||+|++++++|+.++ ++|++++|+..... .. ...+++++.||+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4689999999999999999999887 89999999754321 00 11368999999974
Q ss_pred -HHHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 154 -KKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 154 -~~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.+.+.++..++|+|||++ .|+ ++++|++.++++|||+||.+||.
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALD 1114 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecC
Confidence 567778889999999972 122 78899999999999999998873
No 131
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.25 E-value=6.8e-11 Score=100.63 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~------G 163 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.++.... .+.+++++.+|++|+++++++++ +
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4567899999999999999999999999999999987543211 13468899999999999988875 5
Q ss_pred ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ + +. ++..+++++..+||++||...+
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~ 148 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK 148 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc
Confidence 79999872 0 00 3455667778899999998654
No 132
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.25 E-value=9.7e-11 Score=98.24 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=78.7
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--ccc---ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME---SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~---~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
....++++|||||+|+||++++++|+++|++|.++.|+... ... ..+..++++++|++|.+.+.++++
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34567899999999999999999999999999999987321 111 124568899999999999988876
Q ss_pred CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+||++ . +. ++..+++.+..+||++||...+
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 154 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSF 154 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhc
Confidence 679999972 0 10 2344556778899999997654
No 133
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.25 E-value=5.1e-11 Score=103.96 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.+++++||||+|+||++++++|+++|++|+++.|+.++.... .+..++++.+|++|+++++++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999987653211 12458899999999999998875 38
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||.
T Consensus 85 D~li~n 90 (322)
T PRK07453 85 DALVCN 90 (322)
T ss_pred cEEEEC
Confidence 999987
No 134
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.24 E-value=6.7e-11 Score=98.67 Aligned_cols=100 Identities=14% Similarity=0.121 Sum_probs=78.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
...+++++||||+|+||++++++|+++|++|.++.|+++...+ ..+..+.++.+|++|++++.++++.
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3567899999999999999999999999999999998754321 1244688999999999999888763
Q ss_pred -ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. +++.+++.+..+||++||...
T Consensus 88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 150 (256)
T PRK06124 88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAG 150 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechh
Confidence 48899872 0 01 234555678899999999754
No 135
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.24 E-value=6.8e-11 Score=100.22 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=61.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (198)
++++|||||||+||++++++|.++|++|.+++|+.++.......+++++.+|++|++.+.++++ ++|.|||+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3689999999999999999999999999999998765443333457889999999999887763 67999997
No 136
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.24 E-value=3.8e-11 Score=111.67 Aligned_cols=102 Identities=23% Similarity=0.328 Sum_probs=75.1
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-----CceEEEEccCCCHHHHHHhhc-----C
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR-----G 163 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-----~~vevV~GDl~D~~sL~~AL~-----G 163 (198)
-.....+.|||+||||.+|+.+++.|+++|+.||+++|+..++...++ ...+.+..+...+.+...-+. +
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 344556689999999999999999999999999999999987765544 335556666555444443333 2
Q ss_pred ccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
+..++.+. .|+ +++||+.+||+|||++|+++.
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~ 204 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG 204 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecC
Confidence 33444441 122 899999999999999999875
No 137
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.24 E-value=1e-10 Score=97.29 Aligned_cols=99 Identities=20% Similarity=0.279 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
...+++|||||+|+||++++++|+++|++|.++.|++.... ...+..+.++..|++|++++.++++ ++|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45679999999999999999999999999999999875321 1123456789999999999988775 5799
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 167 VIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
|||++ . +. ++++ +++.+..|||++||.+.
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 151 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 99972 0 11 2333 34557889999999653
No 138
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.24 E-value=7.5e-11 Score=98.77 Aligned_cols=71 Identities=13% Similarity=0.252 Sum_probs=60.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
+++|||||+|+||++++++|+++|++|++++|++.+... ..+..+.++.+|++|++.+.++++ ++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999998654321 124568899999999999988876 6899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 82 vi~~ 85 (263)
T PRK06181 82 LVNN 85 (263)
T ss_pred EEEC
Confidence 9998
No 139
>PRK05717 oxidoreductase; Validated
Probab=99.23 E-value=8.2e-11 Score=98.52 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=61.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++++|||||+|+||++++++|+++|++|.++.|++.+... ..+..+.++.+|++|++++.++++ .+|
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3446789999999999999999999999999999887654322 234568899999999998877653 479
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.|||+
T Consensus 87 ~li~~ 91 (255)
T PRK05717 87 ALVCN 91 (255)
T ss_pred EEEEC
Confidence 99997
No 140
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.23 E-value=6.9e-11 Score=104.98 Aligned_cols=101 Identities=11% Similarity=0.184 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..+++|+||||||+||++++++|+++|++|.++.|++++..+ ..+..+.++.+|++|+++++++++ .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 345789999999999999999999999999999998754321 124568899999999999998864 6
Q ss_pred ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|.+||++ + +. ++..+++.+..+||++||...|.
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~ 149 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR 149 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc
Confidence 89999872 0 01 34556677778999999987653
No 141
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.23 E-value=8.4e-11 Score=98.19 Aligned_cols=99 Identities=16% Similarity=0.168 Sum_probs=77.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|.||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999999999999999999987653211 23457889999999999888875 67
Q ss_pred cEEEEcC--------------hh-----------H------HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS--------------EG-----------F------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a--------------~G-----------~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|++||++ +. . ++..+++.+-.+||++||...+
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 9999872 00 0 2445566777899999996543
No 142
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.23 E-value=1e-10 Score=96.98 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=60.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|++++.++++ ++|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3567999999999999999999999999999999875221 1 1224568899999999999987663 589
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
+|||+
T Consensus 83 ~li~~ 87 (248)
T TIGR01832 83 ILVNN 87 (248)
T ss_pred EEEEC
Confidence 99997
No 143
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.1e-10 Score=97.57 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||||+||++++++|+++|++|++++|++.+.. ...+.++.++.+|++|++++.++++ ++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 45679999999999999999999999999999999876431 1124568999999999999988885 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 85 d~vi~~ 90 (258)
T PRK08628 85 DGLVNN 90 (258)
T ss_pred CEEEEC
Confidence 999998
No 144
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.23 E-value=7.4e-11 Score=98.25 Aligned_cols=100 Identities=16% Similarity=0.126 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.++++.
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 346799999999999999999999999999999998754321 1244688999999999999888764
Q ss_pred ccEEEEcC----h----------h-----------H------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS----E----------G-----------F------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a----~----------G-----------~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|+|||++ . . . ++..+.+.+..+||++||...+
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~ 148 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGL 148 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence 59999972 0 0 0 1233445667899999997654
No 145
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.22 E-value=1.2e-10 Score=96.64 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=58.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c---c---ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~---~---~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.+++|||||+|+||++++++|+++|++|.++.|+.... . . ..+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 36799999999999999999999999999999865321 1 1 123468899999999998887764 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 82 d~vi~~ 87 (256)
T PRK12745 82 DCLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999997
No 146
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.22 E-value=2.8e-11 Score=108.83 Aligned_cols=101 Identities=20% Similarity=0.170 Sum_probs=77.3
Q ss_pred cCCccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhcCc
Q 029118 90 KEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 90 ~~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
+|+-|...+ ++|+||||.||||+|+++.|..+||+|.|+.--....+ ..-.+.++.+.-|+..| .+.++
T Consensus 19 ~~~~~p~~~-lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~ev 92 (350)
T KOG1429|consen 19 REQVKPSQN-LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEV 92 (350)
T ss_pred hhcccCCCC-cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHh
Confidence 455555544 78999999999999999999999999999974222111 11236789999998776 77889
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 165 RSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|.|||.+ .|+ ++-.|++.+ +||++.|+..||+
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYg 146 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYG 146 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccC
Confidence 9999872 122 566677777 9999999999996
No 147
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.5e-10 Score=98.20 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcc-cc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~-a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++||||||||.||++++++|+++| ++|.+++|++++ .. ...+.+++++.+|++|++++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 45689999999999999999999995 999999998765 21 1112368999999999998665553
Q ss_pred CccEEEEcC-----------h-------------h------HHHHHHHhCCCCeEEEEcccce
Q 029118 163 GVRSIICPS-----------E-------------G------FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 GvDaVIh~a-----------~-------------G------~lldAA~~~GVkRiV~vSS~~V 195 (198)
++|.+|+++ . + .+++++++.+..+||++||...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g 149 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAG 149 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence 689998751 0 0 0456677788899999999754
No 148
>PRK07069 short chain dehydrogenase; Validated
Probab=99.21 E-value=1.1e-10 Score=96.38 Aligned_cols=96 Identities=8% Similarity=0.102 Sum_probs=72.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Cccccc---cc----C-CceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME---SF----G-TYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~~---~~----g-~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
+++||||+|+||+++++.|+++|++|+++.|+ .+.... .+ + ..+..+++|++|++++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999997 432211 11 1 124468899999999877764 67
Q ss_pred cEEEEcC-------------hh---------------H--HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------EG---------------F--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~G---------------~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.|||++ +. + +++++++.+.++||++||...+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~ 142 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAF 142 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhc
Confidence 9999982 00 0 4566677788999999997654
No 149
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.21 E-value=8.9e-11 Score=98.73 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhc------CccE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------GVRS 166 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~------GvDa 166 (198)
.++++|||||+|+||++++++|+++|++|.+++|++++.... .+.+++++.+|++|++.+.++++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 457899999999999999999999999999999987654222 23468899999999998887654 5799
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 84 lv~~ 87 (263)
T PRK09072 84 LINN 87 (263)
T ss_pred EEEC
Confidence 9997
No 150
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.20 E-value=1.4e-10 Score=98.22 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.+++++||||+|+||++++++|+++|++|.++.|+.+..... .+.++.++++|++|++.+.++++ .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999999999986543211 23457889999999998887764 68
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 89 d~li~~ 94 (278)
T PRK08277 89 DILING 94 (278)
T ss_pred CEEEEC
Confidence 999986
No 151
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.20 E-value=1.1e-10 Score=95.35 Aligned_cols=94 Identities=18% Similarity=0.280 Sum_probs=71.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-ccc------cccCCceEEEEccCCCHHHHHHhhcC-------ccEE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALRG-------VRSI 167 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~------~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaV 167 (198)
+||||++|+||++++++|+++|++|+++.|+.. ... ...+..+.++.+|++|++++.+++++ +|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999999998752 111 11233578999999999999888764 5999
Q ss_pred EEcC-------------h-----------hH--HHHHHH----hCCCCeEEEEcccce
Q 029118 168 ICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQGAV 195 (198)
Q Consensus 168 Ih~a-------------~-----------G~--lldAA~----~~GVkRiV~vSS~~V 195 (198)
||.+ . +. +++++. +.+.++||++||.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~ 138 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVG 138 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence 9971 0 01 344443 367889999999643
No 152
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.20 E-value=7.5e-11 Score=96.69 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=74.7
Q ss_pred EEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhcC---ccEEEEcC---
Q 029118 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG---VRSIICPS--- 171 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~G---vDaVIh~a--- 171 (198)
|||||+|+||++++++|+++|++|+++.|+++..... . +.+++++.+|++|++++.++++. +|.+||.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 6999999999999999999999999999986543221 1 35688999999999999999864 69999972
Q ss_pred -h--------------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -E--------------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -~--------------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
. +. ++++....+..+||++||.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~ 129 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR 129 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC
Confidence 0 00 34444555678999999987653
No 153
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.19 E-value=1.6e-10 Score=96.52 Aligned_cols=99 Identities=13% Similarity=0.112 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.+..|++++.... .+..+.++.+|++|++++.++++ .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3567899999999999999999999999999999986543211 13457789999999999988774 4
Q ss_pred ccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. + +..+++.+..+||++||...
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS 148 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh
Confidence 79999972 0 11 2 23344567789999999643
No 154
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.4e-10 Score=99.67 Aligned_cols=74 Identities=16% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.+..|+++...+. .+..+.++..|++|++++.++++ .
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999886543211 23457889999999999988875 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 84 id~li~n 90 (275)
T PRK05876 84 VDVVFSN 90 (275)
T ss_pred CCEEEEC
Confidence 6999997
No 155
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.19 E-value=2.4e-10 Score=94.61 Aligned_cols=97 Identities=14% Similarity=0.177 Sum_probs=72.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccc----c--ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM----E--SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~----~--~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||||+||++++++|+++|++|.++.+. ..... + ..+..+.++.+|++|.+.+.++++ .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999886543 22211 1 123356778999999999888774 67
Q ss_pred cEEEEcC----h--------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 165 RSIICPS----E--------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a----~--------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
|+|||++ . +. +++.+++.+..|||++||...
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 143 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG 143 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhc
Confidence 9999982 0 10 345556778899999999643
No 156
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.19 E-value=1.6e-10 Score=96.75 Aligned_cols=99 Identities=16% Similarity=0.217 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
.+++++||||+|+||++++++|+++|++|.++.|+.... ......++.++.+|++|++++.++++ .+|.|||
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 457899999999999999999999999999887654332 12212247899999999999988875 5799999
Q ss_pred cC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ .+. +++.+++.+..+||++||...+
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~ 142 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGI 142 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhC
Confidence 72 011 3444555677899999997654
No 157
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.19 E-value=4.1e-11 Score=104.66 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=66.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a------ 171 (198)
|+||||||+|++|++++++|..+|++|.++.|+ ..|++|.+.+.+.++. .|+|||++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 689999999999999999999999999999665 5789999999999875 69999982
Q ss_pred --------------hh--HHHHHHHhCCCCeEEEEccccee
Q 029118 172 --------------EG--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --------------~G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+ .++++|.+.|+ |+||+||..||
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VF 105 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVF 105 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEE
Confidence 01 27788888885 99999999887
No 158
>PRK09242 tropinone reductase; Provisional
Probab=99.18 E-value=1.8e-10 Score=96.34 Aligned_cols=100 Identities=12% Similarity=0.168 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c--CCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~--g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||+|.||++++++|.++|++|.++.|+.+..... . +..+.++.+|++|++++.++++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3467999999999999999999999999999999987553211 1 3457889999999988776664
Q ss_pred -CccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
.+|+|||++ + +. ++++ +++.+..+||++||.+.+
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~ 151 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL 151 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC
Confidence 579999982 0 11 3333 345677899999997654
No 159
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.18 E-value=1.2e-10 Score=97.44 Aligned_cols=73 Identities=15% Similarity=0.196 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
..+++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..++++.+|++|++++.++++ .+|+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35689999999999999999999999999999998764322 234468899999999999988876 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 85 i~~ 87 (257)
T PRK07067 85 FNN 87 (257)
T ss_pred EEC
Confidence 997
No 160
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.18 E-value=2.3e-10 Score=94.78 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Cccccc------ccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
..+++|||||+|+||++++++|+++|++|.++.++ +....+ ..+..+.++..|++|++++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45799999999999999999999999999876653 322211 1234588899999999999988865
Q ss_pred ccEEEEcC-------------h-----------hH--HHHHHH----hCCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--lldAA~----~~GVkRiV~vSS~~V 195 (198)
+|+|||++ . +. +++++. +.+..+||++||...
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 146 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIG 146 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhh
Confidence 69999982 0 11 334433 355679999999744
No 161
>PRK08643 acetoin reductase; Validated
Probab=99.17 E-value=2e-10 Score=95.85 Aligned_cols=72 Identities=17% Similarity=0.233 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||+|+||++++++|+++|++|+++.|+++.... ..+..+.++++|++|++++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998754321 123467889999999999888775 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.|||+
T Consensus 82 ~vi~~ 86 (256)
T PRK08643 82 VVVNN 86 (256)
T ss_pred EEEEC
Confidence 99997
No 162
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.17 E-value=3.2e-10 Score=93.36 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
+.+++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++..|++|++++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999998887754321 1 1124568899999999999999886 6
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|+|||+
T Consensus 84 id~vi~~ 90 (245)
T PRK12937 84 IDVLVNN 90 (245)
T ss_pred CCEEEEC
Confidence 8999997
No 163
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.17 E-value=2e-10 Score=95.49 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=63.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+...++||||||+|+||++++++|.++|++|+++.|++++.... .+.+++++.+|++|++++.++++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 34568999999999999999999999999999999987654221 13458899999999999998876
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 86 ~~d~li~~ 93 (258)
T PRK06949 86 TIDILVNN 93 (258)
T ss_pred CCCEEEEC
Confidence 57999997
No 164
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.16 E-value=2.8e-10 Score=96.00 Aligned_cols=97 Identities=11% Similarity=0.087 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|.||++++++|+++|++|.++.|++++... ..+.++.++++|++|++++.++++ .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 45789999999999999999999999999999988754321 123468899999999999988874 47
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccc
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
|+|||++ . +. ++..+++.+..+||++||..
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 148 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM 148 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc
Confidence 9999972 0 10 33445566789999999963
No 165
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.16 E-value=2.6e-10 Score=95.78 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||+|.||++++++|+++|++|.++.|++++.... . +..+.++.+|++|++++.++++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3467899999999999999999999999999999987543211 1 2357789999999999877653
Q ss_pred -CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ . +. ++..+++.+..+||++||...+
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 150 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLAL 150 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccccc
Confidence 579999972 0 00 3344556667899999997543
No 166
>PRK08589 short chain dehydrogenase; Validated
Probab=99.15 E-value=4.3e-10 Score=95.77 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+ +.... ..+.++.++.+|++|++++.++++ .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 456799999999999999999999999999999998 33211 123458899999999999887764 4
Q ss_pred ccEEEEcC----h---------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS----E---------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a----~---------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ . +. ++..+++.+ .+||++||...+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~ 145 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQ 145 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhc
Confidence 79999872 0 00 234455556 799999997554
No 167
>PLN02253 xanthoxin dehydrogenase
Probab=99.15 E-value=3.6e-10 Score=95.86 Aligned_cols=75 Identities=13% Similarity=0.133 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---cc--CCceEEEEccCCCHHHHHHhhc-------C
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF--GTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~--g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.+.... .. +.+++++++|++|++++.++++ .
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 3456789999999999999999999999999999987643321 11 2358899999999999998886 6
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 95 id~li~~ 101 (280)
T PLN02253 95 LDIMVNN 101 (280)
T ss_pred CCEEEEC
Confidence 8999997
No 168
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3.6e-10 Score=94.78 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
...+++|||||+|+||++++++|+++|++|.++.|+.+.. . ...+..+.++.+|++|++++.++++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3467999999999999999999999999999999875421 1 11234578899999999999887754
Q ss_pred -ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. ++..+++.+-.+||++||.+.
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSG 148 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence 59999972 0 11 234455667789999998653
No 169
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.15 E-value=5.5e-10 Score=91.85 Aligned_cols=71 Identities=15% Similarity=0.153 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH-HHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~-~sL~~AL~GvDaVIh~ 170 (198)
..+++++||||+|+||++++++|+++|++|.++.|++... ...++.++.+|++|+ +.+.+.+..+|+|||+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ 74 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNT 74 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---cCCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence 3457899999999999999999999999999999876542 234688999999998 5555566788999987
No 170
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.14 E-value=4.7e-10 Score=93.40 Aligned_cols=99 Identities=11% Similarity=0.138 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
...+++|||||+|+||.+++++|+++|++|.++.|+.++.... .+..+.+++.|+.|.+++.++++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999986543211 23457889999999999887764 4
Q ss_pred ccEEEEcCh-------------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPSE-------------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a~-------------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++. +. +++.+++.+..+||++||...
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 148 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNG 148 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhh
Confidence 799998720 11 234456677899999999643
No 171
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.14 E-value=3.6e-10 Score=86.43 Aligned_cols=96 Identities=22% Similarity=0.277 Sum_probs=73.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc---------ccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~---------~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
++++||||+|+||.+++++|+++|+ .|.++.|++.+... ..+..+.++..|+++++.+.++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4699999999999999999999996 57777887644321 1244678899999999988887654
Q ss_pred -ccEEEEcC-------------h-----------hH--HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||.+ . +. +++++++.+.+++|++||.+.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~ 139 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAG 139 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHH
Confidence 59999872 0 11 567777888999999999643
No 172
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.14 E-value=3.1e-10 Score=107.39 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||||+||++++++|+++|++|.++.|+++...+. .+..+.++.+|++|++++.++++ ++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 357899999999999999999999999999999987653211 23468899999999999998886 68
Q ss_pred cEEEEcC-h--------------h-----------H------HHHHHHhCCCCeEEEEcccceec
Q 029118 165 RSIICPS-E--------------G-----------F------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a-~--------------G-----------~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|.|||++ . . . ++..+++.+..+||++||.+++.
T Consensus 450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 514 (657)
T PRK07201 450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT 514 (657)
T ss_pred CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence 9999972 0 0 0 23445667889999999987763
No 173
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.13 E-value=5.6e-10 Score=92.29 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++||||||+|+||++++++|+++|++|++.+|+... .. ...+..+.++..|++|++.+.++++ ++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 5689999999999999999999999999888865321 11 1123456788999999998887764 67
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 86 d~vi~~ 91 (252)
T PRK06077 86 DILVNN 91 (252)
T ss_pred CEEEEC
Confidence 999997
No 174
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.13 E-value=1.8e-10 Score=94.75 Aligned_cols=72 Identities=18% Similarity=0.219 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------c
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G-------v 164 (198)
++++|||||+|+||++++++|+++|++|+++ .|++++..+ ..+..+.++.+|++|++++.++++. +
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 3579999999999999999999999999875 455543221 1234578899999999999988864 4
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||.
T Consensus 81 d~vi~~ 86 (247)
T PRK09730 81 AALVNN 86 (247)
T ss_pred CEEEEC
Confidence 799987
No 175
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2.9e-10 Score=94.80 Aligned_cols=71 Identities=23% Similarity=0.190 Sum_probs=59.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhcCc----cEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALRGV----RSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~Gv----DaVIh~ 170 (198)
++++||||||+||++++++|+++|++|.++.|+++...+. ...++.++++|++|+++++++++.+ |.+||.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 5799999999999999999999999999999987654322 1245889999999999999998764 666654
No 176
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.13 E-value=4.3e-10 Score=95.10 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||||.||++++++|+++|++|.++.|++++.. ...+..+.++++|++|.+++.++++ .+|.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 34679999999999999999999999999999999875432 2234568899999999999988775 4699
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+||+
T Consensus 84 lv~~ 87 (261)
T PRK08265 84 LVNL 87 (261)
T ss_pred EEEC
Confidence 9987
No 177
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.12 E-value=4.1e-10 Score=93.45 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=59.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
++++||||+|+||.+++++|+++|++|.++.|+...... ..+.++.++.+|++|++++.++++ .+|.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999988643211 124468899999999999988764 5699
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 81 vi~~ 84 (254)
T TIGR02415 81 MVNN 84 (254)
T ss_pred EEEC
Confidence 9997
No 178
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4.1e-10 Score=93.50 Aligned_cols=65 Identities=15% Similarity=0.248 Sum_probs=53.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc---cccCCceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~---~~~g~~vevV~GDl~D~~sL~~AL~G 163 (198)
++++|||||+|+||+.++++|+++|++|.++.|++.+ .. ...+.+++++++|++|+++++++++.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 69 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNE 69 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHH
Confidence 3589999999999999999999999999999998732 11 12245688999999999999888754
No 179
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.1e-10 Score=94.00 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=72.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhcC-------ccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG-------VRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~G-------vDaV 167 (198)
|+++|||||||+|. +++.|.++|++|+++.|+++..... . +..++++.+|++|++++.+++++ .|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 47999999999886 9999999999999999987654321 1 24688899999999999988853 4666
Q ss_pred EEc--C--hhHHHHHHHhCCCC----eEEEE
Q 029118 168 ICP--S--EGFISNAGSLKGVQ----HVILL 190 (198)
Q Consensus 168 Ih~--a--~G~lldAA~~~GVk----RiV~v 190 (198)
|+. . ...+..+|++.||+ |||++
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~ 110 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHV 110 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEE
Confidence 654 2 33499999999999 99997
No 180
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.12 E-value=5.6e-10 Score=93.50 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=74.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---c--ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~--~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++++||||+|+||++++++|+++|++|.++.|+..... . ..+..+.++.+|++|++++.++++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999999999999999999998763211 1 123457889999999999988875 569
Q ss_pred EEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 166 SIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
.|||++ . +. ++++ +++.+..+||++||...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 999972 0 11 3333 33556789999998543
No 181
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.12 E-value=6.1e-10 Score=91.65 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=60.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh---c--CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL---~--GvDaVIh~ 170 (198)
+++++||||+|+||++++++|+++|++|++++|++++..+....+++++.+|++|++.+++++ . .+|.|||+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEEC
Confidence 368999999999999999999999999999999876654433345789999999999998864 3 47999997
No 182
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.12 E-value=6.7e-10 Score=93.19 Aligned_cols=74 Identities=18% Similarity=0.272 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-ccc------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|++++|+.. ... ...+..++++.+|++|.+++.++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999877532 211 1124568899999999999988875
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 87 ~iD~vi~~ 94 (258)
T PRK09134 87 PITLLVNN 94 (258)
T ss_pred CCCEEEEC
Confidence 47999998
No 183
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.12 E-value=1e-09 Score=92.30 Aligned_cols=73 Identities=12% Similarity=0.188 Sum_probs=62.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.+..++++|||||+|+||++++++|+++|++|.++.|++.... ...+.++..|++|+++++++++ .+|.|
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3456789999999999999999999999999999998876542 2358899999999999988765 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 82 i~~ 84 (266)
T PRK06171 82 VNN 84 (266)
T ss_pred EEC
Confidence 996
No 184
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.11 E-value=4.9e-10 Score=95.08 Aligned_cols=74 Identities=12% Similarity=0.147 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
...+++|||||+|+||++++++|+++|++|+++.|+++.... ..+.++.++.+|++|++++.++++ +
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 456799999999999999999999999999999998654321 123457889999999999988775 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 87 iD~vi~~ 93 (264)
T PRK07576 87 IDVLVSG 93 (264)
T ss_pred CCEEEEC
Confidence 6999986
No 185
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.11 E-value=7.3e-10 Score=92.57 Aligned_cols=72 Identities=15% Similarity=0.258 Sum_probs=59.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cC-CceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g-~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
+++||||||+|+||++++++|.++|++|.++.|+....... .+ ..++++.+|++|.+.+..+++ .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999999999886533211 12 358899999999999887764 5
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|+|||+
T Consensus 82 id~vv~~ 88 (259)
T PRK12384 82 VDLLVYN 88 (259)
T ss_pred CCEEEEC
Confidence 7999997
No 186
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.11 E-value=6.1e-10 Score=91.93 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhh-------cCccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaV 167 (198)
.+++++||||+|+||++++++|+++|++|.++.|+.+... ...+..+.++++|++|.+.+..++ ..+|+|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4578999999999999999999999999999999865432 223456788999999988776554 368999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 85 i~~ 87 (249)
T PRK06500 85 FIN 87 (249)
T ss_pred EEC
Confidence 997
No 187
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.11 E-value=9.3e-10 Score=95.40 Aligned_cols=75 Identities=24% Similarity=0.335 Sum_probs=60.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|.+.+.++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44467899999999999999999999999999998875321 1 1123457889999999999988774
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|+|||+
T Consensus 123 ~~iD~lI~~ 131 (290)
T PRK06701 123 GRLDILVNN 131 (290)
T ss_pred CCCCEEEEC
Confidence 57999987
No 188
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.11 E-value=1.1e-09 Score=91.41 Aligned_cols=74 Identities=11% Similarity=0.185 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...++++||||+|+||++++++|+++|++ |.++.|++++... ..+..+.++.+|++|++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 34678999999999999999999999999 9999987654321 124467889999999999888775
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 84 ~id~li~~ 91 (260)
T PRK06198 84 RLDALVNA 91 (260)
T ss_pred CCCEEEEC
Confidence 57999998
No 189
>PRK12743 oxidoreductase; Provisional
Probab=99.11 E-value=5.9e-10 Score=93.60 Aligned_cols=72 Identities=24% Similarity=0.188 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||+|+||++++++|+++|++|.++.|+... .. ...+..++++.+|++|+++++++++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4589999999999999999999999999988764432 11 1134568999999999999888775 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 82 d~li~~ 87 (256)
T PRK12743 82 DVLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999997
No 190
>PRK05855 short chain dehydrogenase; Validated
Probab=99.10 E-value=5.9e-10 Score=102.22 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..+++|||||||+||++++++|.++|++|+++.|+.++..+ ..+..++++.+|++|++++.++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 35689999999999999999999999999999998754321 124568899999999999988875 47
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCC-CeEEEEcccceec
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGV-QHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GV-kRiV~vSS~~Vy~ 197 (198)
|.|||++ + |. ++..+++.+- .|||++||.+.|.
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 9999972 0 11 2223344443 6999999987664
No 191
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.10 E-value=8.7e-10 Score=91.21 Aligned_cols=73 Identities=14% Similarity=0.317 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccc---cccCCceEEEEccCCCHHHHHHhhcC--------cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM---ESFGTYVESMAGDASNKKFLKTALRG--------VR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~---~~~g~~vevV~GDl~D~~sL~~AL~G--------vD 165 (198)
.++++|||||+|+||+++++.|+++|++|.++.|+. .... ...+..+.++.+|++|++++.++++. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 346899999999999999999999999998876643 2221 11234688999999999999888753 89
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
+|||+
T Consensus 84 ~li~~ 88 (253)
T PRK08642 84 TVVNN 88 (253)
T ss_pred EEEEC
Confidence 99986
No 192
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.10 E-value=9.5e-10 Score=91.49 Aligned_cols=100 Identities=11% Similarity=0.076 Sum_probs=72.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCC--CHHHHHHh------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS--NKKFLKTA------ 160 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~--D~~sL~~A------ 160 (198)
-.+.+++|||||+|+||.+++++|+++|++|.+++|++++.... ....++++.+|++ +.+.+.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 44677999999999999999999999999999999987543211 1235678888886 55544443
Q ss_pred -hcCccEEEEcC--------------h-----------hH--HHH----HHHhCCCCeEEEEcccce
Q 029118 161 -LRGVRSIICPS--------------E-----------GF--ISN----AGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 161 -L~GvDaVIh~a--------------~-----------G~--lld----AA~~~GVkRiV~vSS~~V 195 (198)
+..+|.|||++ . ++ +++ .+++.+.++||++||...
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~ 155 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG 155 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhh
Confidence 34689999972 0 11 233 335678899999999643
No 193
>PRK06128 oxidoreductase; Provisional
Probab=99.10 E-value=1.2e-09 Score=94.71 Aligned_cols=102 Identities=15% Similarity=0.194 Sum_probs=75.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc--c------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--M------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a--~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
...++++|||||+|+||++++++|+++|++|.+..|+.+.. . ...+..+.++.+|++|+++++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 34567999999999999999999999999998877654321 1 1124567889999999999887764
Q ss_pred --CccEEEEcC--------------h-----------hH--HHHHHHhC--CCCeEEEEcccceec
Q 029118 163 --GVRSIICPS--------------E-----------GF--ISNAGSLK--GVQHVILLSQGAVVC 197 (198)
Q Consensus 163 --GvDaVIh~a--------------~-----------G~--lldAA~~~--GVkRiV~vSS~~Vy~ 197 (198)
++|.|||++ + ++ +++++... .-.+||++||...|.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~ 197 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ 197 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC
Confidence 689999972 0 11 44555421 225999999987764
No 194
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.10 E-value=6.1e-10 Score=97.68 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=62.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCCHHHHHHhhc----
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
.+..+++++|||||++||.+++++|+++|++|.++.|+.++..+. . +..++++.+|+.|+++++++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999987643211 1 2358899999999999987764
Q ss_pred ---CccEEEEc
Q 029118 163 ---GVRSIICP 170 (198)
Q Consensus 163 ---GvDaVIh~ 170 (198)
.+|.+||.
T Consensus 90 ~~~~iD~li~n 100 (313)
T PRK05854 90 EGRPIHLLINN 100 (313)
T ss_pred hCCCccEEEEC
Confidence 47999987
No 195
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.10 E-value=6.2e-10 Score=93.21 Aligned_cols=74 Identities=14% Similarity=0.065 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
..+++||||||+|+||.+++++|+++|++|.++.|++...... .....+++++|++|++.+.++++ .+|.||
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3467899999999999999999999999999999987543211 01123688999999999988886 569999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
|+
T Consensus 85 ~~ 86 (255)
T PRK06057 85 NN 86 (255)
T ss_pred EC
Confidence 97
No 196
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.09 E-value=8.2e-10 Score=92.90 Aligned_cols=73 Identities=19% Similarity=0.330 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.++++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++++|++|+++++++++ .+|.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46789999999999999999999999999999998755432 234458899999999999888764 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 85 i~~ 87 (263)
T PRK06200 85 VGN 87 (263)
T ss_pred EEC
Confidence 987
No 197
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.09 E-value=1e-09 Score=91.82 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.++.... .+..+..+.+|++|++++.++++ .
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3467899999999999999999999999999999987543211 23457889999999999988774 7
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||+
T Consensus 87 id~lv~~ 93 (253)
T PRK05867 87 IDIAVCN 93 (253)
T ss_pred CCEEEEC
Confidence 8999997
No 198
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.08 E-value=1e-09 Score=97.96 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------cCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RGV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~Gv 164 (198)
..+++|||||||.||++++++|+++|++|.++.|++++..+ ..+..+.++..|++|++++++++ .++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 45789999999999999999999999999999998765421 12456788999999999999887 467
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||++ + +. ++...++.+-.+||++||.+.+
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~ 147 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGF 147 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhc
Confidence 9999972 0 11 2333455667899999997654
No 199
>PRK09135 pteridine reductase; Provisional
Probab=99.07 E-value=4.2e-10 Score=92.47 Aligned_cols=72 Identities=13% Similarity=0.138 Sum_probs=59.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c-------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~-------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++||||||+|+||++++++|+++|++|.++.|+.... . ...+..++++.+|++|.+++.++++ +
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999864321 1 1112358899999999999998886 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 86 ~d~vi~~ 92 (249)
T PRK09135 86 LDALVNN 92 (249)
T ss_pred CCEEEEC
Confidence 7999998
No 200
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.07 E-value=1.1e-09 Score=91.62 Aligned_cols=99 Identities=12% Similarity=0.163 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..+++||||||+|+||++++++|.++|++|.++.|+...... ..+.++.++..|++|.+++.++++ .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999987654321 123457889999999999887764 5
Q ss_pred ccEEEEcC------------h-----------hH--HHHHH----HhCCCCeEEEEcccce
Q 029118 164 VRSIICPS------------E-----------GF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------~-----------G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
+|+|||++ . +. +++++ .+.+..+||++||.+.
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 149 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA 149 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc
Confidence 69999972 0 11 33443 3455679999999654
No 201
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.07 E-value=1.5e-09 Score=91.51 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
..++++|||||++.||+.++++|+++|++|.++.|+.... . ...+.++.++.+|++|++++.++++ .+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4568999999999999999999999999999988864321 1 1234568899999999999988875 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 86 ~lv~~ 90 (251)
T PRK12481 86 ILINN 90 (251)
T ss_pred EEEEC
Confidence 99997
No 202
>PRK07985 oxidoreductase; Provisional
Probab=99.07 E-value=3e-09 Score=92.41 Aligned_cols=74 Identities=23% Similarity=0.317 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...+++|||||+|+||++++++|+++|++|.+..|+... .. ...+..+.++.+|++|++++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 455789999999999999999999999999988765421 11 1123457789999999998877653
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|++||.
T Consensus 127 g~id~lv~~ 135 (294)
T PRK07985 127 GGLDIMALV 135 (294)
T ss_pred CCCCEEEEC
Confidence 57999986
No 203
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.07 E-value=1.6e-09 Score=91.29 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.+++++||||||+||++++++|+++|++|.++.|+.+...+. .+..+.++.+|++|.+++.++++ .+|.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467999999999999999999999999999999987543322 23458889999999998887774 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 84 i~~ 86 (262)
T TIGR03325 84 IPN 86 (262)
T ss_pred EEC
Confidence 987
No 204
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.06 E-value=7.8e-10 Score=90.92 Aligned_cols=73 Identities=8% Similarity=0.166 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++||||||+|+||+++++.|+++|++|.+++|++++.... . ..+++++++|++|++.+.++++ ++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 457999999999999999999999999999999987644221 1 1258899999999999987764 458
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 84 ~ii~~ 88 (238)
T PRK05786 84 GLVVT 88 (238)
T ss_pred EEEEc
Confidence 89887
No 205
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.05 E-value=1.4e-09 Score=91.41 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=58.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
|++|||||+|.||+.++++|+++|++|.++.|+++..... . ...+.++.+|++|+++++++++ ++|.|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4799999999999999999999999999999987543211 1 1257889999999999988774 68999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 81 i~n 83 (259)
T PRK08340 81 VWN 83 (259)
T ss_pred EEC
Confidence 986
No 206
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.04 E-value=6.3e-10 Score=99.41 Aligned_cols=89 Identities=18% Similarity=0.169 Sum_probs=68.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-CccEEEEcC---------
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPS--------- 171 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-GvDaVIh~a--------- 171 (198)
|+|||||||||++++.+|...||+|.+++|++.+....++.+++.. +.+.++.. +||+||+.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~-------~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLW-------EGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccccc-------chhhhcccCCCCEEEECCCCccccccC
Confidence 6899999999999999999999999999999988776666555422 34455665 899999972
Q ss_pred -------------hhH--HHHHHH--hCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGS--LKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~--~~GVkRiV~vSS~~Vy~ 197 (198)
..| +.++.. +..++-+|--|.++.|+
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG 116 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYG 116 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEec
Confidence 112 455543 66788888888888886
No 207
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.03 E-value=1.8e-09 Score=89.20 Aligned_cols=72 Identities=17% Similarity=0.249 Sum_probs=58.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhc-------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (198)
.+++|||||+|.||++++++|+++|++|.++.|++++.... ...+++++.+|++|++++.++++ ++|.+||+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 46899999999999999999999999999999987543221 11247889999999999877653 47999997
No 208
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.03 E-value=2.3e-09 Score=89.61 Aligned_cols=72 Identities=17% Similarity=0.255 Sum_probs=60.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||+|.||++++++|+++|++|.++.|++...... .+..+.++.+|++|++.+.++++ .+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 36899999999999999999999999999999987543211 23468899999999999988764 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.|||+
T Consensus 81 ~lI~~ 85 (252)
T PRK07677 81 ALINN 85 (252)
T ss_pred EEEEC
Confidence 99987
No 209
>PRK08324 short chain dehydrogenase; Validated
Probab=99.02 E-value=1.4e-09 Score=105.43 Aligned_cols=99 Identities=18% Similarity=0.301 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.++++|||||+|+||++++++|+++|++|+++.|+++..... ++ ..+.++.+|++|++++.++++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999999999999999999999987654221 22 268899999999999988875 789
Q ss_pred EEEEcCh------------------------hH--HH----HHHHhCCC-CeEEEEccccee
Q 029118 166 SIICPSE------------------------GF--IS----NAGSLKGV-QHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a~------------------------G~--ll----dAA~~~GV-kRiV~vSS~~Vy 196 (198)
.|||++. +. ++ +..++.+. .+||++||..++
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~ 562 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV 562 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc
Confidence 9999820 11 33 33455665 799999997553
No 210
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.02 E-value=4.9e-09 Score=89.54 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------------cccCCceEEEEccCCCHHHHHHhhc--
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR-- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------------~~~g~~vevV~GDl~D~~sL~~AL~-- 162 (198)
.++++|||||+|+||++++++|+++|++|.++.|+.++.. ...+.++.++.+|++|++.+.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999764311 0123457889999999999988775
Q ss_pred -----CccEEEEc
Q 029118 163 -----GVRSIICP 170 (198)
Q Consensus 163 -----GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 85 ~~~~g~id~li~~ 97 (273)
T PRK08278 85 VERFGGIDICVNN 97 (273)
T ss_pred HHHhCCCCEEEEC
Confidence 67999997
No 211
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.02 E-value=2.1e-09 Score=88.92 Aligned_cols=72 Identities=13% Similarity=0.144 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccc------cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||||+||++++++|+++|++|....|+ ++... ...+..+.++.+|++|++++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999999999999998877643 32211 1123457889999999999998886 67
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06123 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999997
No 212
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.01 E-value=2.9e-09 Score=89.19 Aligned_cols=100 Identities=24% Similarity=0.201 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCcc-----------c------ccccCCceEEEEccCCCHHHHH
Q 029118 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN-----------A------MESFGTYVESMAGDASNKKFLK 158 (198)
Q Consensus 98 ~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~-----------a------~~~~g~~vevV~GDl~D~~sL~ 158 (198)
.+++|||||||| .||.+++++|+++|++|.++.|++.+ . ....+..++++..|++|++++.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 457899999996 69999999999999999999987211 0 0112346899999999999987
Q ss_pred Hhhc-------CccEEEEcC-------------h-----------hH--HHHHHH----hCCCCeEEEEcccceec
Q 029118 159 TALR-------GVRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQGAVVC 197 (198)
Q Consensus 159 ~AL~-------GvDaVIh~a-------------~-----------G~--lldAA~----~~GVkRiV~vSS~~Vy~ 197 (198)
.+++ .+|+|||++ . ++ +++++. ..+-.+||++||...+.
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 7764 479999972 0 11 333432 33567999999976643
No 213
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.00 E-value=2.8e-09 Score=88.33 Aligned_cols=72 Identities=19% Similarity=0.238 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
+++||||||+|+||+.++++|+++|++|.++++ +++.... ..+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999987764 4333211 123468899999999999887664 68
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06947 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999987
No 214
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.00 E-value=6.3e-09 Score=87.42 Aligned_cols=74 Identities=11% Similarity=0.214 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...+++|||||+|.||++++++|+++|++|.++.|+.... . ...+..+.++..|++|.+++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567999999999999999999999999999888854321 1 1123457789999999999887764
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|++||+
T Consensus 85 ~id~lv~~ 92 (261)
T PRK08936 85 TLDVMINN 92 (261)
T ss_pred CCCEEEEC
Confidence 57999997
No 215
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.99 E-value=4.1e-09 Score=88.88 Aligned_cols=74 Identities=12% Similarity=0.225 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||++.||++++++|+++|++|.++.|+. +... ...+..+.++..|++|+++++++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4567999999999999999999999999998876543 2221 1124468899999999999988775
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 86 g~id~lv~n 94 (260)
T PRK08416 86 DRVDFFISN 94 (260)
T ss_pred CCccEEEEC
Confidence 47999986
No 216
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.99 E-value=5.6e-09 Score=87.70 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc--c--cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--M--ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a--~--~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
..++++|||||+|.||++++++|.++|++|.++.|+.... . ...+..+.+++.|++|.+++.++++ .+|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4567999999999999999999999999999887654211 1 1124467889999999999988875 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 88 ~li~~ 92 (253)
T PRK08993 88 ILVNN 92 (253)
T ss_pred EEEEC
Confidence 99997
No 217
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.99 E-value=2.1e-09 Score=91.76 Aligned_cols=101 Identities=17% Similarity=0.205 Sum_probs=82.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
..-.++..+|.||||..|+-+++++++++. +|.++.|..-. ....+..+..+.-|+..-+.+..+.+|.|..||+ .
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-CccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 344567899999999999999999999884 89999987422 1223456778889999999999999999999998 1
Q ss_pred --------hhH----------HHHHHHhCCCCeEEEEccccee
Q 029118 172 --------EGF----------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --------~G~----------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|+ ..++|++.|+++||++||.++.
T Consensus 93 TTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd 135 (238)
T KOG4039|consen 93 TTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD 135 (238)
T ss_pred ccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC
Confidence 222 5788899999999999999875
No 218
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.99 E-value=4.2e-09 Score=91.25 Aligned_cols=74 Identities=16% Similarity=0.274 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccC--CceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g--~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||+|.||++++++|.++|++|.++.|+++.... ..+ ..+..+.+|++|++++.++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 456799999999999999999999999999999998765321 122 235566799999999888764 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 87 d~vI~n 92 (296)
T PRK05872 87 DVVVAN 92 (296)
T ss_pred CEEEEC
Confidence 999997
No 219
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.98 E-value=4.5e-09 Score=92.99 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++||||||+.||..++++|.++|++|..+.|+.++..++ .+-.++++..|++|++.+.+..+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 4577899999999999999999999999999999998864322 23457899999999999888763
Q ss_pred CccEEEEcC----h------------h--------------HHHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS----E------------G--------------FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a----~------------G--------------~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+|+++ . . .++.-+.++|-.+||.++|.+.+
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~ 147 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL 147 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc
Confidence 589999872 0 0 04455677888899999998654
No 220
>PRK12742 oxidoreductase; Provisional
Probab=98.97 E-value=3.3e-09 Score=87.17 Aligned_cols=73 Identities=14% Similarity=0.241 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccccc-cCCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES-FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~~-~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
.+++||||||+|.||++++++|+++|++|.++.|+. +...+. ...+++++.+|++|.+.+.++++ .+|.+||+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 467899999999999999999999999998887643 322211 11236788999999998888774 47999997
No 221
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.97 E-value=3.8e-09 Score=87.09 Aligned_cols=69 Identities=20% Similarity=0.223 Sum_probs=55.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
||||||+|+||.+++++|+++|++|.++.|.... .. ...+.++.++.+|++|++++.++++ ..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998875422 11 1124568899999999999888764 45888
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||.
T Consensus 81 i~~ 83 (239)
T TIGR01831 81 VLN 83 (239)
T ss_pred EEC
Confidence 886
No 222
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.96 E-value=4.3e-09 Score=89.31 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=56.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCC-ceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT-YVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~-~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++||||||+||++++++|+++|++|.++.|++++.... .+. .+.++.+|++|++++.++++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999987543211 122 24567899999998876664 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
+|||+
T Consensus 81 ~lv~~ 85 (272)
T PRK07832 81 VVMNI 85 (272)
T ss_pred EEEEC
Confidence 99997
No 223
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.96 E-value=7.4e-09 Score=90.89 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=59.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhh-------cCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL-------~Gv 164 (198)
++++||||||+.||.+++++|+++| ++|.++.|+.++..+. .+..++++.+|++|++++++++ .++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999999999 9999999987543211 1245788999999999988776 358
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.+||.
T Consensus 83 D~lI~n 88 (314)
T TIGR01289 83 DALVCN 88 (314)
T ss_pred CEEEEC
Confidence 999986
No 224
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.96 E-value=6.8e-09 Score=86.59 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=55.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCccccc------ccCCceEEEEccCCCHHHHHHhhc---------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR--------- 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~--------- 162 (198)
++++|||||+|+||++++++|.++|++|.+.. |+.+.... ..+..+..+..|++|.+.+..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 57899999999999999999999999998875 33332211 113446788999999887765432
Q ss_pred ----CccEEEEc
Q 029118 163 ----GVRSIICP 170 (198)
Q Consensus 163 ----GvDaVIh~ 170 (198)
++|.|||+
T Consensus 84 ~g~~~id~lv~~ 95 (252)
T PRK12747 84 TGSTKFDILINN 95 (252)
T ss_pred cCCCCCCEEEEC
Confidence 68999997
No 225
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.95 E-value=6.6e-09 Score=85.56 Aligned_cols=74 Identities=15% Similarity=0.288 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||+++++.|+++|++|.++.|++.+... ..+..+.++..|++|++++.++++ +
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 346789999999999999999999999999999988754221 124567889999999998877664 3
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|+|||+
T Consensus 83 id~vi~~ 89 (253)
T PRK08217 83 LNGLINN 89 (253)
T ss_pred CCEEEEC
Confidence 6999987
No 226
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.95 E-value=8.9e-09 Score=84.87 Aligned_cols=69 Identities=16% Similarity=0.235 Sum_probs=53.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh---hcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA---LRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A---L~GvDaVIh~ 170 (198)
|+++||||+|+||++++++|+++| +.|.+..|+... ......+.++++|++|+++++++ +.++|+|||+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--ccccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 479999999999999999999986 455555555433 22235688999999999987664 4588999987
No 227
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.94 E-value=3e-09 Score=87.74 Aligned_cols=72 Identities=13% Similarity=0.119 Sum_probs=60.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhc-----CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-----GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~-----GvDaVIh~ 170 (198)
+++++||||+|++|++++++|+++|++|.++.|++.+..... ..++.++.+|++|+++++++++ ++|+|||+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 367999999999999999999999999999999886542211 1357888999999998888775 58999987
No 228
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.93 E-value=1.1e-08 Score=85.92 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc---CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~---GvDaV 167 (198)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+.++.++..|++|++++.++++ .+|.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 457999999999999999999999999999999987643221 13457899999999999888764 58999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 86 v~~ 88 (259)
T PRK06125 86 VNN 88 (259)
T ss_pred EEC
Confidence 997
No 229
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.92 E-value=5.6e-09 Score=101.75 Aligned_cols=73 Identities=22% Similarity=0.301 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cC-CceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g-~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... .+ ..+..+++|++|++++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999987543211 12 246789999999999998886
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 493 ~iDilV~n 500 (676)
T TIGR02632 493 GVDIVVNN 500 (676)
T ss_pred CCcEEEEC
Confidence 78999998
No 230
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.92 E-value=1.4e-08 Score=89.12 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC-CceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g-~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
...+.++|||||+.||..++++|.++|++|.+..|+.++..++ ++ ..+.++..|++|++++++++ ..+|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 3457899999999999999999999999999999998765432 33 35789999999999876665 4689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
.+|+.+ .|. ++..+.+++-.+||.+||++
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 999862 011 55667777777999999986
No 231
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.91 E-value=1.7e-08 Score=83.57 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCC--HHHHHHhh------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASN--KKFLKTAL------ 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D--~~sL~~AL------ 161 (198)
..+++++||||+|+||++++++|+++|++|.++.|++++.... .+..+.++..|+.| .+.+.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999988643211 12346778899976 33444332
Q ss_pred --cCccEEEEc
Q 029118 162 --RGVRSIICP 170 (198)
Q Consensus 162 --~GvDaVIh~ 170 (198)
..+|.|||+
T Consensus 84 ~~~~id~vi~~ 94 (239)
T PRK08703 84 TQGKLDGIVHC 94 (239)
T ss_pred hCCCCCEEEEe
Confidence 467999987
No 232
>PRK06484 short chain dehydrogenase; Validated
Probab=98.90 E-value=1.3e-08 Score=94.05 Aligned_cols=75 Identities=20% Similarity=0.302 Sum_probs=62.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++.+|||||+|.||++++++|+++|++|.++.|++++.. +..+..+..+.+|++|++++.++++ .+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 446789999999999999999999999999999999875432 2234557789999999999988774 479
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 346 ~li~n 350 (520)
T PRK06484 346 VLVNN 350 (520)
T ss_pred EEEEC
Confidence 99996
No 233
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.89 E-value=2.1e-08 Score=84.26 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCC-hHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cC-CceEEEEccCCCHHHHHHhhc------
Q 029118 98 ARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 98 ~~~~ILVTGATG-fIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g-~~vevV~GDl~D~~sL~~AL~------ 162 (198)
.++++|||||+| .||+++++.|+++|++|.+..|+.++.... .+ ..+.++++|++|++.+.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 357899999998 699999999999999999998876543211 23 358899999999999988775
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|+|||+
T Consensus 96 g~id~li~~ 104 (262)
T PRK07831 96 GRLDVLVNN 104 (262)
T ss_pred CCCCEEEEC
Confidence 57999998
No 234
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.89 E-value=1.2e-08 Score=89.17 Aligned_cols=74 Identities=16% Similarity=0.210 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-cccc------ccCCceEEEEccCCCHHHHHHhhc------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~~------~~g~~vevV~GDl~D~~sL~~AL~------G 163 (198)
..+++++||||+|+||++++++|+++|++|.+..|+.. .... ..+.++.++.+|++|++++.++++ .
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 45679999999999999999999999999999887532 2111 124568899999999999888774 5
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 90 iD~li~n 96 (306)
T PRK07792 90 LDIVVNN 96 (306)
T ss_pred CCEEEEC
Confidence 7999997
No 235
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.87 E-value=9.3e-09 Score=87.86 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=61.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++++||||+|+||++++++|+++|++|.++.|++.. ...........+..|++|.+.+.+.+..+|.+||+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 4456799999999999999999999999999999998622 21111112367899999999999999999999997
No 236
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.85 E-value=1.8e-08 Score=78.55 Aligned_cols=97 Identities=20% Similarity=0.260 Sum_probs=72.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeC--Ccccc------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAM------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~--~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++||||++.||+.++++|+++| +.|.++.|+ .+... ...+..+.+++.|++|+++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 479999999999999999999995 567777777 22211 1134678999999999999988873 6
Q ss_pred ccEEEEcC-------------h-----------h--HHHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------G--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ + + .+.+++..++-.+||++||....
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV 139 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc
Confidence 69999872 0 0 03444444678999999997654
No 237
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.84 E-value=1.2e-08 Score=90.99 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=67.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a------ 171 (198)
|+|||||++|++|.+|.++|. .+++|.++.|.. .|++|++.+.+.++.. |+|||++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 459999999999999999987 779999998754 7899999999999865 9999982
Q ss_pred --------------hh--HHHHHHHhCCCCeEEEEccccee
Q 029118 172 --------------EG--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --------------~G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.| .+.++|++.| -++||+||-.|+
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVF 104 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVF 104 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEe
Confidence 11 2788899888 579999997774
No 238
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.84 E-value=8.7e-09 Score=93.32 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=78.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-ccc--ccC--CceEEEEccCCCHHHHHHhhcCccEEEEc--C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME--SFG--TYVESMAGDASNKKFLKTALRGVRSIICP--S 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~--~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~--a 171 (198)
+-..-|.|||||+|+.|+.+|...|-+|.+--|..+. ... ..| ..+-+...|+.|+++++++++-...||+. .
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 3456789999999999999999999999999885432 211 122 24778899999999999999999999987 1
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
.+. +...|+++||+|+|++|++++
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga 180 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA 180 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc
Confidence 111 778899999999999999874
No 239
>PRK06484 short chain dehydrogenase; Validated
Probab=98.84 E-value=2.8e-08 Score=91.84 Aligned_cols=74 Identities=16% Similarity=0.250 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||++.||+.++++|+++|++|.++.|+.++.. ...+..+.++..|++|++++.++++ .+|.
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 35679999999999999999999999999999999876542 2234567789999999999888774 4799
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+||+
T Consensus 83 li~n 86 (520)
T PRK06484 83 LVNN 86 (520)
T ss_pred EEEC
Confidence 9987
No 240
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.83 E-value=6.6e-09 Score=86.57 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=58.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhc----CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR----GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~----GvDaVIh~ 170 (198)
++++||||+|.||++++++|.++|++|.++.|+.++..... ..+++++++|++|+++++++++ .+|.+||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 36999999999999999999999999999999876543221 1246789999999999988875 57999986
No 241
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.83 E-value=2.9e-08 Score=88.05 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=70.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCC--HHH---HHHhhcCc-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASN--KKF---LKTALRGV- 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D--~~s---L~~AL~Gv- 164 (198)
++.++||||||.||++++++|.++|++|.++.|++++..+. . +..+..+..|+++ .+. +.+.+.+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999999998654211 1 1346778899985 333 34445554
Q ss_pred -cEEEEcC----h----------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 165 -RSIICPS----E----------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 -DaVIh~a----~----------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||.+ . +. ++..+++.+-.+||++||.+.+
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~ 197 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 4888751 0 11 3344556778899999997653
No 242
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.82 E-value=3.1e-08 Score=80.90 Aligned_cols=94 Identities=23% Similarity=0.304 Sum_probs=69.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc-c-c-c------cccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-N-A-M------ESFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~-~-a-~------~~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
++||||++|.||..+++.|..++. +|.++.|++. . . . +..+..++++..|++|++++.++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999975 6888888832 1 1 1 12356799999999999999999854
Q ss_pred ccEEEEcC------------------------hhH--HHHHHHhCCCCeEEEEcccc
Q 029118 164 VRSIICPS------------------------EGF--ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 164 vDaVIh~a------------------------~G~--lldAA~~~GVkRiV~vSS~~ 194 (198)
++.|||++ .|. +.++.....++.||+.||++
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis 138 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSIS 138 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChh
Confidence 47899982 011 45666678999999999975
No 243
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.80 E-value=2.7e-08 Score=83.40 Aligned_cols=73 Identities=14% Similarity=0.217 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc----cc------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~----a~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.++++|||||+|+||++++++|+++|++|.++.++... .. ...+.+++++++|++|++++.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999998888765421 11 1123468899999999999998875
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 87 ~~~id~li~~ 96 (257)
T PRK12744 87 FGRPDIAINT 96 (257)
T ss_pred hCCCCEEEEC
Confidence 57999997
No 244
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.80 E-value=1.7e-08 Score=93.64 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc---CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+++++||||||+||++++++|.++|++|.++.|++++..... ...++.+..|++|++.+.+.+.++|.+||+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 4678999999999999999999999999999999875432211 224678899999999999999999999986
No 245
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.80 E-value=3.3e-08 Score=90.35 Aligned_cols=74 Identities=15% Similarity=0.072 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cccc-cCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES-FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~~-~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
.+++++|||||+|.||.++++.|.++|++|.++.|+... .... ...+.+++..|++|++++.++++ ++|.
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 456799999999999999999999999999999885422 1111 01235688999999999887764 6899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 288 vi~~ 291 (450)
T PRK08261 288 VVHN 291 (450)
T ss_pred EEEC
Confidence 9997
No 246
>PLN00015 protochlorophyllide reductase
Probab=98.80 E-value=3.4e-08 Score=86.21 Aligned_cols=93 Identities=12% Similarity=0.148 Sum_probs=70.4
Q ss_pred EEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 103 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
|||||++.||.+++++|+++| ++|.+..|+.++.... .+..+.++..|++|.++++++++ .+|.+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999987543211 12357889999999999887763 579999
Q ss_pred EcC--------------hh-----------H------HHHHHHhCC--CCeEEEEcccce
Q 029118 169 CPS--------------EG-----------F------ISNAGSLKG--VQHVILLSQGAV 195 (198)
Q Consensus 169 h~a--------------~G-----------~------lldAA~~~G--VkRiV~vSS~~V 195 (198)
|.+ ++ . ++..+++.+ ..|||++||...
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~ 140 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG 140 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc
Confidence 862 01 0 244455554 579999999754
No 247
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.79 E-value=5.3e-08 Score=82.11 Aligned_cols=100 Identities=17% Similarity=0.089 Sum_probs=71.9
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCC-----------ccc---c---cccCCceEEEEccCCCHHHH
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA---M---ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~-----------~~a---~---~~~g~~vevV~GDl~D~~sL 157 (198)
..++++||||||| .||++++++|+++|++|.+..|.. ... . ...+..+.+++.|++|++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4567999999995 799999999999999998875321 000 0 11244678899999999999
Q ss_pred HHhhc-------CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 158 KTALR-------GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 158 ~~AL~-------GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.++++ ..|+|||.+ + +. ++..+++.+-.+||++||....
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 159 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ 159 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence 88773 369999872 0 11 2344555556799999997653
No 248
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.79 E-value=4.6e-08 Score=83.96 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc------CccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------GvDa 166 (198)
++.++|||| |+||++++++|. +|++|.++.|++++.... .+..+.++.+|++|++++.++++ .+|.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 457899998 689999999995 899999999986543211 13457889999999999988874 5899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 80 li~n 83 (275)
T PRK06940 80 LVHT 83 (275)
T ss_pred EEEC
Confidence 9997
No 249
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.77 E-value=9.6e-08 Score=77.35 Aligned_cols=59 Identities=14% Similarity=0.267 Sum_probs=52.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
+++|||||+|.||++++++|.++ ++|.++.|++. .++.|++|+++++++++ ++|.|||+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 47999999999999999999999 99999988653 36789999999988876 68999987
No 250
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.77 E-value=6.3e-08 Score=86.48 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=80.0
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCc-eEEEEccCCCHHHHHHhh----
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTY-VESMAGDASNKKFLKTAL---- 161 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~-vevV~GDl~D~~sL~~AL---- 161 (198)
.+...++.|+||||+..||.+++.+|..+|..+..++|..++.. +..+.. +.++++|++|.+++.+++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 35667899999999999999999999999999888888765432 223444 899999999999999775
Q ss_pred ---cCccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 162 ---RGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 162 ---~GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
.++|.+|+.+ .|+ ++.-+++.+=.|||.+||++
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia 152 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA 152 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence 6899999862 111 34556677788999999975
No 251
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.75 E-value=1.2e-07 Score=81.94 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC---------ccccc------ccCCceEEEEccCCCHHHHHHhh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME------SFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~---------~~a~~------~~g~~vevV~GDl~D~~sL~~AL 161 (198)
..++++|||||++.||++++++|+++|++|.++.|+. +.... ..+..+.++..|++|++++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3467999999999999999999999999999988764 22111 12345778999999999888766
Q ss_pred -------cCccEEEEc
Q 029118 162 -------RGVRSIICP 170 (198)
Q Consensus 162 -------~GvDaVIh~ 170 (198)
..+|.+||+
T Consensus 84 ~~~~~~~g~id~lv~n 99 (286)
T PRK07791 84 DAAVETFGGLDVLVNN 99 (286)
T ss_pred HHHHHhcCCCCEEEEC
Confidence 357999997
No 252
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.70 E-value=2e-07 Score=78.49 Aligned_cols=74 Identities=9% Similarity=0.110 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------c-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------R- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~- 162 (198)
..+++++||||++.||+.++++|.++|++|.++.|++++..+ ..+..+..++.|++|++++++++ .
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 346799999999999999999999999999999998765321 12445778889999999998765 2
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 83 ~iD~li~n 90 (227)
T PRK08862 83 APDVLVNN 90 (227)
T ss_pred CCCEEEEC
Confidence 58999987
No 253
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.69 E-value=4.7e-08 Score=82.74 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=53.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-ccccc-------ccCCceEEEEccCCCHHHHH----Hhh------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLK----TAL------ 161 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~-------~~g~~vevV~GDl~D~~sL~----~AL------ 161 (198)
+.++||||+|+||++++++|+++|++|.++.|+. +.... ..+..+.++.+|++|++++. +.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999987653 22211 11234667899999987553 222
Q ss_pred -cCccEEEEc
Q 029118 162 -RGVRSIICP 170 (198)
Q Consensus 162 -~GvDaVIh~ 170 (198)
.++|+|||+
T Consensus 82 ~g~iD~lv~n 91 (267)
T TIGR02685 82 FGRCDVLVNN 91 (267)
T ss_pred cCCceEEEEC
Confidence 468999987
No 254
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.69 E-value=1.2e-07 Score=79.89 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=50.9
Q ss_pred eEEEEcCCChHHHHHHHHHHH----CCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc
Q 029118 101 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~----~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
.+|||||++.||.+++++|.+ +|++|.++.|+.+..... .+..+.++.+|++|+++++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~ 75 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLK 75 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHH
Confidence 589999999999999999987 799999999987543211 12358889999999999888764
No 255
>PRK05599 hypothetical protein; Provisional
Probab=98.68 E-value=2.4e-07 Score=77.94 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=56.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cC-CceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g-~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
|++|||||++.||+.++++|. +|++|.++.|++++..+. .+ ..+.++.+|++|++++++++ ..+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999998 699999999987654321 12 24788999999999988775 3579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 80 ~lv~n 84 (246)
T PRK05599 80 LAVVA 84 (246)
T ss_pred EEEEe
Confidence 99986
No 256
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.63 E-value=1.3e-07 Score=87.67 Aligned_cols=87 Identities=20% Similarity=0.222 Sum_probs=74.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEcChh-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G- 173 (198)
+++|||.|| |+||+.++..|.+++ .+|.+..|++++..+. .+++++.++.|+.|.+++.+++++.|+||++..+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 478999999 999999999999998 8999999998765433 2357999999999999999999999999998432
Q ss_pred ---HHHHHHHhCCCCe
Q 029118 174 ---FISNAGSLKGVQH 186 (198)
Q Consensus 174 ---~lldAA~~~GVkR 186 (198)
++++||.++||.-
T Consensus 80 ~~~~i~ka~i~~gv~y 95 (389)
T COG1748 80 VDLTILKACIKTGVDY 95 (389)
T ss_pred hhHHHHHHHHHhCCCE
Confidence 3888999888753
No 257
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.62 E-value=1.6e-07 Score=84.83 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=78.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-c---------ccCCceEEEEccCCCHHHHHHhhcCc--cE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-E---------SFGTYVESMAGDASNKKFLKTALRGV--RS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~---------~~g~~vevV~GDl~D~~sL~~AL~Gv--Da 166 (198)
.++.||||-||+-|.++++.|+++||+|..+.|+.+... . .-++.+.++.||++|...|.++++-+ |-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 467899999999999999999999999999998743211 1 11245889999999999999999866 78
Q ss_pred EEEc-C-------------------hhH--HHHHHHhCCC--CeEEEEcccceec
Q 029118 167 IICP-S-------------------EGF--ISNAGSLKGV--QHVILLSQGAVVC 197 (198)
Q Consensus 167 VIh~-a-------------------~G~--lldAA~~~GV--kRiV~vSS~~Vy~ 197 (198)
|++. + .|+ ++||.+..|- -||...||...|+
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG 136 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYG 136 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhc
Confidence 8876 2 233 8999988775 4677778876665
No 258
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.61 E-value=1.3e-07 Score=85.17 Aligned_cols=86 Identities=22% Similarity=0.295 Sum_probs=66.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCC-C-cEEEEEeCCcccccc----cCCceEEEEccCCCHHHHHHhhcCccEEEEcCh---
Q 029118 102 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G-~-~VralvR~~~~a~~~----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~--- 172 (198)
|+|.|| |++|+.+++.|.++. + +|.+..|+.+++... .+.++++++.|+.|++++.++++++|.||++..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 799999 999999999998876 3 799999998875433 356899999999999999999999999999832
Q ss_pred h-HHHHHHHhCCCCeEEE
Q 029118 173 G-FISNAGSLKGVQHVIL 189 (198)
Q Consensus 173 G-~lldAA~~~GVkRiV~ 189 (198)
+ .++++|.++|+ |.|=
T Consensus 80 ~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 80 GEPVARACIEAGV-HYVD 96 (386)
T ss_dssp HHHHHHHHHHHT--EEEE
T ss_pred hHHHHHHHHHhCC-Ceec
Confidence 2 28999999987 4444
No 259
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.58 E-value=4.2e-07 Score=79.83 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=68.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcCh-----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE----- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a~----- 172 (198)
|+|||+||||. |+.++++|.++||+|.+.+|+..........+...+..+..|.+.+.+.++ ++|+||+.+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 58999999999 999999999999999999998865433322223455566678888988885 5899998732
Q ss_pred --hHHHHHHHhCCCCeEEE
Q 029118 173 --GFISNAGSLKGVQHVIL 189 (198)
Q Consensus 173 --G~lldAA~~~GVkRiV~ 189 (198)
.+..++|++.|+..+=|
T Consensus 80 is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 80 ITTNATAVCKELGIPYVRF 98 (256)
T ss_pred HHHHHHHHHHHhCCcEEEE
Confidence 23788899888877655
No 260
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.54 E-value=5.4e-07 Score=81.24 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..+++++|||||..||..++++|..+|.+|...+|+.++..+. ....+.+++.|+.|..++++..+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3448999999999999999999999999999999998543211 12457789999999999988764
Q ss_pred -CccEEEEcC-----------hhH-----------------HHHHHHhCCCCeEEEEcccc
Q 029118 163 -GVRSIICPS-----------EGF-----------------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 163 -GvDaVIh~a-----------~G~-----------------lldAA~~~GVkRiV~vSS~~ 194 (198)
..|..|+.+ +|+ +++.++.....|||++||..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 346666641 221 56777777669999999953
No 261
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.51 E-value=1.1e-06 Score=75.92 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=56.4
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---ccc---cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~---~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++.+|||||+ +.||+.++++|.++|++|.+..|+.+ ... ...+.. .+++.|++|+++++++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46799999997 79999999999999999999888742 111 112333 578999999999887763
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 83 ~iDilVnn 90 (274)
T PRK08415 83 KIDFIVHS 90 (274)
T ss_pred CCCEEEEC
Confidence 56999887
No 262
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.49 E-value=3.1e-07 Score=75.55 Aligned_cols=74 Identities=16% Similarity=0.184 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++++|+||||.+|+.+++.|...|++|+++.|+.+++... +. .+.++...|+.|.+.+.++++++|.||++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 4567899999999999999999999999999999987654321 11 13566778899999999999999999987
No 263
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.48 E-value=7.7e-07 Score=80.43 Aligned_cols=99 Identities=14% Similarity=0.080 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccc--ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a--~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
..+.+|+||||+|.||+.++..|..++ .+++.+.++.... ........+....+.+|+.++.++++|+|+||+++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 457799999999999999999888555 6888888743222 11111111345567778777788999999999972
Q ss_pred ----hh---------------HHHHHHHhCCCCeEEEEcccce
Q 029118 172 ----EG---------------FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----~G---------------~lldAA~~~GVkRiV~vSS~~V 195 (198)
.+ .+++++++++++++|+++|-.+
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv 128 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 11 1678899999999999999655
No 264
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.46 E-value=2.8e-06 Score=72.16 Aligned_cols=73 Identities=10% Similarity=-0.002 Sum_probs=56.1
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc------ccc--cCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a------~~~--~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.+++++||||+ +.||+.++++|.++|++|.+..|+.+.. .+. .+..+.+++.|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 45789999986 7999999999999999998876654321 111 12246788999999999987763
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 85 ~g~iD~lv~n 94 (258)
T PRK07370 85 WGKLDILVHC 94 (258)
T ss_pred cCCCCEEEEc
Confidence 57999887
No 265
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.43 E-value=8.5e-07 Score=74.91 Aligned_cols=73 Identities=8% Similarity=0.057 Sum_probs=58.0
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc---ccccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a---~~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++++||||+ +.||+.++++|+++|++|.+..|+.+.. .+..+..+.+++.|++|+++++++++ .+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 45789999999 7999999999999999999998874211 12223457889999999999887653 479
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||.
T Consensus 86 ~lv~n 90 (252)
T PRK06079 86 GIVHA 90 (252)
T ss_pred EEEEc
Confidence 99886
No 266
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=98.40 E-value=2.3e-06 Score=77.08 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=60.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcE---EEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRI---KALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~V---ralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~ 174 (198)
+++|+|.||||++|+++++.|.+++|++ ++++|+.+......-.+.++...|+.+. .++++|+||++ ..+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g~ 75 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGSV 75 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChHH
Confidence 3689999999999999999999988865 8888765433222111245666676542 45799999988 3332
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
+.....++|+ .+|=+|+
T Consensus 76 s~~~~~~~~~~G~-~VIDlS~ 95 (334)
T PRK14874 76 SKKYAPKAAAAGA-VVIDNSS 95 (334)
T ss_pred HHHHHHHHHhCCC-EEEECCc
Confidence 5566667787 5554554
No 267
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.39 E-value=1.9e-06 Score=78.53 Aligned_cols=90 Identities=13% Similarity=0.178 Sum_probs=71.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-CceEEEEccCCCHHHHHHh-hcCccEEEEc--Chh-H
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICP--SEG-F 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~A-L~GvDaVIh~--a~G-~ 174 (198)
|+|+|.|+ |.+|+++++.|.++|++|+++.|+++....... .+++++.||.+++..+.++ ++++|+||.+ ... +
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~~n 79 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDETN 79 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChHHH
Confidence 47999998 999999999999999999999998876554322 4689999999999999999 9999999987 222 1
Q ss_pred --HHHHHHhC-CCCeEEEE
Q 029118 175 --ISNAGSLK-GVQHVILL 190 (198)
Q Consensus 175 --lldAA~~~-GVkRiV~v 190 (198)
+...+++. +..++|..
T Consensus 80 ~~~~~~~r~~~~~~~ii~~ 98 (453)
T PRK09496 80 MVACQIAKSLFGAPTTIAR 98 (453)
T ss_pred HHHHHHHHHhcCCCeEEEE
Confidence 44556654 66666554
No 268
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=98.38 E-value=8.3e-07 Score=80.14 Aligned_cols=98 Identities=18% Similarity=0.210 Sum_probs=75.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEe-----CCcccc-cccCCceEEEEccCCCHHHHHHhh--cCccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVK-----DKRNAM-ESFGTYVESMAGDASNKKFLKTAL--RGVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR-----~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh 169 (198)
+.+||||+.||||++.++.+... .+....+.. +..... ....++..++.+|+.|...+...+ ..+|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 78999999999999999999875 455555542 111111 123467899999999999988887 46799998
Q ss_pred c-C-------------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 170 P-S-------------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~-a-------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
. + .++ ++++++.. ++++|||+|+-.||+
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYG 137 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYG 137 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceec
Confidence 7 2 112 78999877 799999999999996
No 269
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.37 E-value=1.4e-06 Score=73.87 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=58.6
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeCC--cccc---cccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAM---ESFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~~--~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..+++++|||| ++.||.+++++|.++|++|.+..|+. +... ...+..+.++..|++|++++++++ .
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 34678999999 89999999999999999999998764 2111 123345778999999999988775 3
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+|+.
T Consensus 85 ~iD~li~n 92 (256)
T PRK07889 85 GLDGVVHS 92 (256)
T ss_pred CCcEEEEc
Confidence 57999986
No 270
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.36 E-value=2.1e-06 Score=75.67 Aligned_cols=74 Identities=9% Similarity=0.070 Sum_probs=58.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc----------ccc------cccCCceEEEEccCCCHHHHHHh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAM------ESFGTYVESMAGDASNKKFLKTA 160 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~----------~a~------~~~g~~vevV~GDl~D~~sL~~A 160 (198)
..++++|||||++.||++++++|+++|++|.++.|+.. ... ...+..+.++++|++|+++++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 35679999999999999999999999999999999742 111 11133577899999999999877
Q ss_pred hc-------CccEEEEc
Q 029118 161 LR-------GVRSIICP 170 (198)
Q Consensus 161 L~-------GvDaVIh~ 170 (198)
++ .+|.+||.
T Consensus 86 ~~~~~~~~g~iDilVnn 102 (305)
T PRK08303 86 VERIDREQGRLDILVND 102 (305)
T ss_pred HHHHHHHcCCccEEEEC
Confidence 63 57888875
No 271
>PLN00106 malate dehydrogenase
Probab=98.34 E-value=2.9e-06 Score=76.75 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccc--ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a--~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
++..+|+||||+|+||.+++..|..++. +++.+.+++... ..+..........++.+.+++.++++|+|.|||++
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 4556999999999999999998887664 799998876211 11111111223445445556788999999999982
Q ss_pred ----hh---------------HHHHHHHhCCCCeEEEEcccce
Q 029118 172 ----EG---------------FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----~G---------------~lldAA~~~GVkRiV~vSS~~V 195 (198)
.+ .+.+++++++.+++|+++|--+
T Consensus 96 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 96 VPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 11 1678888999999999998544
No 272
>PRK06720 hypothetical protein; Provisional
Probab=98.34 E-value=2.6e-06 Score=69.83 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------cC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~G 163 (198)
..++.++||||++.||+.+++.|.++|++|.+..|+.+.... ..+..+.++..|++|++.+.+++ ..
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457799999999999999999999999999999987653311 12445678899999999887754 36
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||.
T Consensus 94 iDilVnn 100 (169)
T PRK06720 94 IDMLFQN 100 (169)
T ss_pred CCEEEEC
Confidence 8999987
No 273
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.32 E-value=2.9e-06 Score=72.15 Aligned_cols=73 Identities=10% Similarity=0.090 Sum_probs=57.4
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---ccc---ccc-CCceEEEEccCCCHHHHHHhhc------
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESF-GTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~---~~~-g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
.+++++||||+ +-||++++++|.++|++|.+..|+.. ... ... +.++.+++.|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 46789999997 89999999999999999999877532 111 111 3457889999999999888763
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 86 g~ld~lv~n 94 (257)
T PRK08594 86 GVIHGVAHC 94 (257)
T ss_pred CCccEEEEC
Confidence 46999876
No 274
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.31 E-value=1.3e-06 Score=78.75 Aligned_cols=70 Identities=16% Similarity=0.068 Sum_probs=51.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-------CcEEEEEeCCcccccccCCceE------EEEccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVE------SMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-------~~VralvR~~~~a~~~~g~~ve------vV~GDl~D~~sL~~AL~GvDa 166 (198)
.+|+||||+|++|++++..|+..+ .+|++++|++... ...+...+ ...+|+.+...+.++++|+|.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 479999999999999999998854 5899999865321 11121122 223455556788899999999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 82 VI~t 85 (325)
T cd01336 82 AILV 85 (325)
T ss_pred EEEe
Confidence 9998
No 275
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.30 E-value=1.9e-06 Score=79.52 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=64.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc-ChhH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-SEGF 174 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~-a~G~ 174 (198)
.+++|.|.||||++|+.+++.|.++ .++|+.++++.+..+........+..+|+.+...++.+ ++++|+||.+ ..+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5568999999999999999999888 78999999865432221111223344565544444443 7899999987 3332
Q ss_pred ---HHHHHHhCCCCeEEEEcccc
Q 029118 175 ---ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS~~ 194 (198)
++.++ ++| .+||-+|+..
T Consensus 117 s~~i~~~~-~~g-~~VIDlSs~f 137 (381)
T PLN02968 117 TQEIIKAL-PKD-LKIVDLSADF 137 (381)
T ss_pred HHHHHHHH-hCC-CEEEEcCchh
Confidence 66665 456 6888888753
No 276
>PRK09620 hypothetical protein; Provisional
Probab=98.25 E-value=3.3e-06 Score=72.87 Aligned_cols=73 Identities=19% Similarity=0.247 Sum_probs=53.6
Q ss_pred CCCeEEEEcCC----------------ChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHH
Q 029118 98 ARDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 98 ~~~~ILVTGAT----------------GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~ 159 (198)
.+++||||+|- ||+|++++++|+.+|++|+++.+......... ...+..+.++....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 46789999774 99999999999999999999986432111111 1234456775555568888
Q ss_pred hhc--CccEEEEc
Q 029118 160 ALR--GVRSIICP 170 (198)
Q Consensus 160 AL~--GvDaVIh~ 170 (198)
+++ ++|+|||+
T Consensus 82 ~~~~~~~D~VIH~ 94 (229)
T PRK09620 82 IITHEKVDAVIMA 94 (229)
T ss_pred HhcccCCCEEEEC
Confidence 884 78999998
No 277
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=98.24 E-value=8.5e-06 Score=61.04 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=56.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
|+|.|. |.+|+.+++.|.+.+.+|.++.++++........+++++.||.+|++.|+++ ++.+++||.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEc
Confidence 567777 6899999999999777999999998776555455689999999999999986 6889999987
No 278
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.22 E-value=4.7e-06 Score=71.56 Aligned_cols=65 Identities=5% Similarity=0.121 Sum_probs=48.3
Q ss_pred EcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC--HHHHHHhhcCccEEEEc
Q 029118 105 TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICP 170 (198)
Q Consensus 105 TGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D--~~sL~~AL~GvDaVIh~ 170 (198)
-.+|||+|++++++|+++|++|+++.|+..... ....+++++..+..+ .+.+.+++.++|+|||+
T Consensus 22 N~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~ 88 (229)
T PRK06732 22 NHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHS 88 (229)
T ss_pred CccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeC
Confidence 367999999999999999999999987653221 112357777654332 35677778899999998
No 279
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.22 E-value=5e-06 Score=71.48 Aligned_cols=73 Identities=8% Similarity=0.053 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCccc---cc---ccCCceEEEEccCCCHHHHHHhh-------
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA---ME---SFGTYVESMAGDASNKKFLKTAL------- 161 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a---~~---~~g~~vevV~GDl~D~~sL~~AL------- 161 (198)
..++.+|||||++ .||+.++++|.++|++|.+..|+.... .. ..+. ..++++|++|++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3467899999997 999999999999999999988865321 11 1122 346899999999988776
Q ss_pred cCccEEEEc
Q 029118 162 RGVRSIICP 170 (198)
Q Consensus 162 ~GvDaVIh~ 170 (198)
..+|.+||+
T Consensus 84 g~iD~lVnn 92 (271)
T PRK06505 84 GKLDFVVHA 92 (271)
T ss_pred CCCCEEEEC
Confidence 357999986
No 280
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.21 E-value=7.6e-06 Score=90.21 Aligned_cols=98 Identities=18% Similarity=0.261 Sum_probs=75.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccc----------------------------------------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNA---------------------------------------- 136 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a---------------------------------------- 136 (198)
.++++|||||++.||..++++|.++ |.+|.++.|++...
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4679999999999999999999988 69999999982100
Q ss_pred -------------ccccCCceEEEEccCCCHHHHHHhhc------CccEEEEcC------------------------hh
Q 029118 137 -------------MESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS------------------------EG 173 (198)
Q Consensus 137 -------------~~~~g~~vevV~GDl~D~~sL~~AL~------GvDaVIh~a------------------------~G 173 (198)
....+..++++.+|++|.+++.++++ ++|.|||.+ .|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 01124568899999999999988874 579999972 11
Q ss_pred H--HHHHHHhCCCCeEEEEcccce
Q 029118 174 F--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 174 ~--lldAA~~~GVkRiV~vSS~~V 195 (198)
. +++++.....++||++||...
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag 2179 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAG 2179 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhh
Confidence 1 566666667789999999643
No 281
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.21 E-value=6.4e-06 Score=69.80 Aligned_cols=74 Identities=8% Similarity=-0.072 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc---cccc--CCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESF--GTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a---~~~~--g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..++++|||||+ +.||+.++++|+++|++|.+..|+.+.. .+.. ...+.++..|++|++++++++ .
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 456799999998 5999999999999999999998875321 1110 123467899999999988775 3
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 88 ~ld~lv~n 95 (258)
T PRK07533 88 RLDFLLHS 95 (258)
T ss_pred CCCEEEEc
Confidence 57999886
No 282
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.14 E-value=1e-05 Score=69.51 Aligned_cols=73 Identities=10% Similarity=0.059 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCc---ccccc--cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~---~a~~~--~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.+++++||||++ .||+.++++|+++|++|.+..|+.. ...+. ..+.+..+.+|++|+++++++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 457899999986 8999999999999999988888631 11111 11345678999999999998773 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||+
T Consensus 85 iD~linn 91 (262)
T PRK07984 85 FDGFVHS 91 (262)
T ss_pred CCEEEEC
Confidence 6999987
No 283
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.13 E-value=1.1e-05 Score=76.55 Aligned_cols=100 Identities=22% Similarity=0.282 Sum_probs=73.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC---CcEEEEEeCCcc--ccccc----------------C---CceEEEEccC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRN--AMESF----------------G---TYVESMAGDA 151 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G---~~VralvR~~~~--a~~~~----------------g---~~vevV~GDl 151 (198)
-...++|||||||||+|.-++..|+..- -++-.+.|.... +.+++ + ..+..+.||+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 3457899999999999999999998753 267777886532 11110 0 3577899999
Q ss_pred CCH------HHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhC-CCCeEEEEcccce
Q 029118 152 SNK------KFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQGAV 195 (198)
Q Consensus 152 ~D~------~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~-GVkRiV~vSS~~V 195 (198)
.++ +.+....+.++.|||++ .|+ +++.|++. ..+-+||+|+.-+
T Consensus 89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~ 158 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYS 158 (467)
T ss_pred cCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhe
Confidence 863 55666778999999982 133 78888765 6899999998543
No 284
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.13 E-value=1.8e-05 Score=67.78 Aligned_cols=90 Identities=17% Similarity=0.247 Sum_probs=70.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHh-hcCccEEEEc-C--hh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICP-S--EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~A-L~GvDaVIh~-a--~G 173 (198)
|+++|.| .|.+|++|++.|.+.||+|.++.++++...+... ....++.||-+|++.|++| ++.+|+++.+ . .-
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 3455555 6899999999999999999999999987655333 5589999999999999999 8999999987 2 22
Q ss_pred H--HHHHH-HhCCCCeEEEE
Q 029118 174 F--ISNAG-SLKGVQHVILL 190 (198)
Q Consensus 174 ~--lldAA-~~~GVkRiV~v 190 (198)
+ +...| ++.|++++|--
T Consensus 80 N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 80 NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 2 33334 44799888753
No 285
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.12 E-value=1.1e-05 Score=68.54 Aligned_cols=74 Identities=7% Similarity=0.025 Sum_probs=55.9
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeCCc---ccccc--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~~~---~a~~~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++||||| ++.||++++++|+++|++|.+..|+.. ...+. .......+++|++|+++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 34678999997 679999999999999999988766532 11111 11234578999999999988763
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 84 ~iD~lVnn 91 (261)
T PRK08690 84 GLDGLVHS 91 (261)
T ss_pred CCcEEEEC
Confidence 57999987
No 286
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.10 E-value=1.4e-05 Score=72.65 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=56.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEE--EEeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vra--lvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~ 174 (198)
+.+|+|+||||++|+.+++.|.+++|++.. .+++.+.+.+... .+ ...++.+.+.. .++++|.||.+ ..+.
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~--~~~~vD~vFla~p~~~ 78 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF--DFSQVQLAFFAAGAAV 78 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH--HhcCCCEEEEcCCHHH
Confidence 468999999999999999999988887665 3344443321111 11 23444443332 25899999987 3332
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
+++.+.++|++ +|=.|+
T Consensus 79 s~~~v~~~~~~G~~-VIDlS~ 98 (336)
T PRK05671 79 SRSFAEKARAAGCS-VIDLSG 98 (336)
T ss_pred HHHHHHHHHHCCCe-EEECch
Confidence 77778888864 444443
No 287
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.09 E-value=3.4e-06 Score=77.11 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=52.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHC-C-CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G-~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|+||||+|+||++++++|+++ | .++..+.|+..++.... .++..+++. .+.+++.++|.|||+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La---~el~~~~i~---~l~~~l~~aDiVv~~ 222 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ---AELGGGKIL---SLEEALPEADIVVWV 222 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH---HHhccccHH---hHHHHHccCCEEEEC
Confidence 567789999999999999999999865 5 58888888766553321 123334443 477899999999998
No 288
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.06 E-value=2.6e-05 Score=71.11 Aligned_cols=95 Identities=20% Similarity=0.247 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHh-hcCccEEEEcC--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTA-LRGVRSIICPS-- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a-- 171 (198)
.++++|+|.|+ |.+|+++++.|.++|++|.++.++++..... ...++.++.||.+|++.|+++ ++.+++||.+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~ 307 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence 34678999999 9999999999999999999999988754332 224578999999999999654 58899998772
Q ss_pred -hhH--HHHHHHhCCCCeEEEEcc
Q 029118 172 -EGF--ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~--lldAA~~~GVkRiV~vSS 192 (198)
..+ +...|++.++.+++....
T Consensus 308 ~~~n~~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 308 DEANILSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred cHHHHHHHHHHHHhCCCeEEEEEC
Confidence 222 334567778887776543
No 289
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.06 E-value=2.2e-06 Score=75.75 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=79.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------ 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (198)
-...||.|+.||.|.+|++..+..++.|-.+.|+..+ ....+..++.|+++|.....-+..++.|+..|+-+.
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~ 131 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI 131 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence 4468999999999999999999999999999998654 334466789999999998888899999999998761
Q ss_pred ------hhH----HHHHHHhCCCCeEEEEccc
Q 029118 172 ------EGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ------~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
.|+ -+.+|.++||++|||+|..
T Consensus 132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~ 163 (283)
T KOG4288|consen 132 ILMDRINGTANINAVKAAAKAGVPRFVYISAH 163 (283)
T ss_pred HHHHHhccHhhHHHHHHHHHcCCceEEEEEhh
Confidence 121 4577889999999999974
No 290
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=98.06 E-value=2.1e-05 Score=71.33 Aligned_cols=86 Identities=16% Similarity=0.161 Sum_probs=57.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEE---eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hhH--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EGF-- 174 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv---R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G~-- 174 (198)
+|+|.||||++|+.+++.|.+++|++..++ ++.+......-.+.+.+..|+. ..+++++|+||.+. .+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~ 75 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK 75 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence 489999999999999999999899876554 5543322211123567777774 23468999999883 332
Q ss_pred -HHHHHHhCCCCeEEEEcc
Q 029118 175 -ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 -lldAA~~~GVkRiV~vSS 192 (198)
++..+.++|+ ++|=+|+
T Consensus 76 ~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 76 EFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHHHHHHHCCC-EEEECCH
Confidence 5555666787 4554443
No 291
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.05 E-value=1.4e-05 Score=67.85 Aligned_cols=72 Identities=10% Similarity=-0.025 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCcc---cccc---cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMES---FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~---a~~~---~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++.++||||++ .||++++++|.++|++|.+..|+... ..+. .+. ..+++.|++|+++++++++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357899999997 79999999999999999888877421 1111 122 2357899999999888773
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+|+.
T Consensus 86 ~iDilVnn 93 (260)
T PRK06603 86 SFDFLLHG 93 (260)
T ss_pred CccEEEEc
Confidence 47888875
No 292
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.05 E-value=4.2e-05 Score=69.59 Aligned_cols=76 Identities=21% Similarity=0.217 Sum_probs=62.4
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc----CCceEEEEccCCCHHHHHHhhc--------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR-------- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~----g~~vevV~GDl~D~~sL~~AL~-------- 162 (198)
...+.+.|||||+....|+.++++|.++|+.|.|-+-+++.+.... .++...++.|+++++++++|.+
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 3566788999999999999999999999999999997776654322 4667888999999999999984
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
|-=+||+.
T Consensus 105 ~gLwglVNN 113 (322)
T KOG1610|consen 105 DGLWGLVNN 113 (322)
T ss_pred ccceeEEec
Confidence 44566665
No 293
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.04 E-value=2.9e-05 Score=64.39 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cccccC----CceEEEEccCCC-HHHHHHhh-----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTAL----- 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~~g----~~vevV~GDl~D-~~sL~~AL----- 161 (198)
..++.+|||||++.||..+++.|+++|+.|.++.|+... ...... ..+.+...|+++ .+.++.++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999887543 111122 357778899998 88777665
Q ss_pred --cCccEEEEc
Q 029118 162 --RGVRSIICP 170 (198)
Q Consensus 162 --~GvDaVIh~ 170 (198)
.++|.+|+.
T Consensus 83 ~~g~id~lvnn 93 (251)
T COG1028 83 EFGRIDILVNN 93 (251)
T ss_pred HcCCCCEEEEC
Confidence 347877775
No 294
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.03 E-value=2e-05 Score=67.80 Aligned_cols=71 Identities=6% Similarity=0.031 Sum_probs=55.3
Q ss_pred CCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---cccc---ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAME---SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++|||||+ +.||+.++++|.++|++|.+..|+.. ...+ ..+ ....+++|++|+++++++++ .
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999997 89999999999999999988877631 1111 122 25578999999999988763 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||.
T Consensus 89 iD~lv~n 95 (272)
T PRK08159 89 LDFVVHA 95 (272)
T ss_pred CcEEEEC
Confidence 7999987
No 295
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.02 E-value=1.2e-05 Score=68.53 Aligned_cols=72 Identities=14% Similarity=0.180 Sum_probs=54.6
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeC---Cccccc---ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAME---SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~---~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++||||| ++.||+.++++|+++|++|.+..|. .+...+ ..+ ...++..|++|++++.++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4678999996 6799999999999999999887543 222211 122 23468899999999988873
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 84 ~iD~lvnn 91 (260)
T PRK06997 84 GLDGLVHS 91 (260)
T ss_pred CCcEEEEc
Confidence 57999886
No 296
>PRK05086 malate dehydrogenase; Provisional
Probab=98.01 E-value=3.8e-05 Score=68.87 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=63.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHH---CCCcEEEEEeCCccc---ccccC-CceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~---~G~~VralvR~~~~a---~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
++|+|.||||.||++++..|.. .++++.++.|++... ..... +....+.+ .+.+.+.++++++|.||.++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 5899999999999999987744 346888888875321 11111 11223444 22345677889999999872
Q ss_pred ----hh---------------HHHHHHHhCCCCeEEEEccc
Q 029118 172 ----EG---------------FISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ----~G---------------~lldAA~~~GVkRiV~vSS~ 193 (198)
.+ .+++++++++.+++|.+.|-
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 11 16788889999999999874
No 297
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.98 E-value=3.1e-05 Score=79.62 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=72.0
Q ss_pred CccccCCCCeEEEEcCCChHHHHHHHHHHHC-CCc-------------EEEEEeCCcccccccC--CceEEEEccCCCHH
Q 029118 92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVK-RTR-------------IKALVKDKRNAMESFG--TYVESMAGDASNKK 155 (198)
Q Consensus 92 ~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~-------------VralvR~~~~a~~~~g--~~vevV~GDl~D~~ 155 (198)
.......+++|+|.|| |++|+.+++.|... +++ |.+..++++.+.+... ++++.++.|+.|.+
T Consensus 562 ~~~~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e 640 (1042)
T PLN02819 562 KAEVTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSE 640 (1042)
T ss_pred cccccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHH
Confidence 3344566789999997 99999999999764 333 5555666655443211 35788999999999
Q ss_pred HHHHhhcCccEEEEcC----hhHHHHHHHhCCCCeEEEEc
Q 029118 156 FLKTALRGVRSIICPS----EGFISNAGSLKGVQHVILLS 191 (198)
Q Consensus 156 sL~~AL~GvDaVIh~a----~G~lldAA~~~GVkRiV~vS 191 (198)
.+.++++++|+||.+. ...++.+|.++|+ |+|-.|
T Consensus 641 ~L~~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek 679 (1042)
T PLN02819 641 SLLKYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS 679 (1042)
T ss_pred HHHHhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence 9999999999999882 2237788888884 666554
No 298
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.93 E-value=0.00013 Score=56.15 Aligned_cols=86 Identities=21% Similarity=0.277 Sum_probs=52.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCc-cc---ccccC---CceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR-NA---MESFG---TYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~-~a---~~~~g---~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
+|.|.||||++|+.+++.|.+. ..++..++.+.. .. ...++ ...+...-+ .|.+ .+.++|.||++ .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence 6899999999999999988874 346666654443 21 11111 112222223 3433 35899999998 3
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. +...+.++|+ ++|=+|+
T Consensus 76 ~~~~~~~~~~~~~~g~-~ViD~s~ 98 (121)
T PF01118_consen 76 HGASKELAPKLLKAGI-KVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHHTTS-EEEESSS
T ss_pred hhHHHHHHHHHhhCCc-EEEeCCH
Confidence 332 6666778888 5554444
No 299
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.90 E-value=7.5e-05 Score=71.12 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=60.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
+..|+|.| .|.+|++++++|.++|++|.++.+|+++.......+..++.||.+|++.+++| ++.+|+|+.+
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 46788887 58899999999999999999999998776544445689999999999999976 5788988876
No 300
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=4e-05 Score=68.08 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=64.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC---
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS--- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a--- 171 (198)
.++|||||+||.+|+++++.+.++|. +=.++. .--..|+++.+..++.++-. ..|||.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~--------------~skd~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI--------------GSKDADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe--------------ccccccccchHHHHHHHhccCCceeeehHhhh
Confidence 36899999999999999999988876 222221 11235788888888888654 6888872
Q ss_pred --------------------hhHHHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGFISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
..+++..|.++||+++|+.-|..+|.
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfP 112 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFP 112 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecC
Confidence 11278899999999999998888764
No 301
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.86 E-value=6.5e-05 Score=68.02 Aligned_cols=91 Identities=14% Similarity=0.050 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccc--cCCceEEE-EccCCCHHHHHHhhcCccEEEEc-Chh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES--FGTYVESM-AGDASNKKFLKTALRGVRSIICP-SEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~--~g~~vevV-~GDl~D~~sL~~AL~GvDaVIh~-a~G 173 (198)
+++|+|.||||++|+.+++.|.+. ++++.+++++.+..... ..+.+..+ ..++.+.+.. ++.++|+||++ ..+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~ 79 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG 79 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH
Confidence 468999999999999999999876 67888888743322111 01111111 2234444332 56889999987 222
Q ss_pred ---HHHHHHHhCCCCeEEEEcc
Q 029118 174 ---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ---~lldAA~~~GVkRiV~vSS 192 (198)
.++.++.++| +++|=+|+
T Consensus 80 ~~~~~v~~a~~aG-~~VID~S~ 100 (343)
T PRK00436 80 VSMDLAPQLLEAG-VKVIDLSA 100 (343)
T ss_pred HHHHHHHHHHhCC-CEEEECCc
Confidence 2666666666 57776665
No 302
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.86 E-value=8.3e-05 Score=71.98 Aligned_cols=71 Identities=20% Similarity=0.241 Sum_probs=61.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
++.|+|.| -|.+|+++++.|.++|+++.++.+|++........+..++.||.+|++.+++| ++.+|+||.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 56788887 79999999999999999999999998876544445688999999999999987 6889999987
No 303
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.85 E-value=0.00015 Score=64.63 Aligned_cols=35 Identities=11% Similarity=0.042 Sum_probs=31.8
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
..++++||||| +.-||..+++.|.++|++|.+ +|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~ 43 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW 43 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence 66889999999 899999999999999999988 664
No 304
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.84 E-value=6.5e-05 Score=68.18 Aligned_cols=90 Identities=13% Similarity=0.086 Sum_probs=55.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEE-EeCCcccc---cccCCceEEE-EccCCCHHHHHHhhcCccEEEEc-Ch
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNAM---ESFGTYVESM-AGDASNKKFLKTALRGVRSIICP-SE 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vral-vR~~~~a~---~~~g~~vevV-~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (198)
++|.|.||||++|+.+++.|... +++++++ +++....+ ..++ .++.. ..++.+. ...+.+.++|+||++ ..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPI-DEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence 47999999999999999999875 6788865 43332211 1122 11111 1112211 223344689999988 33
Q ss_pred hH---HHHHHHhCCCCeEEEEcc
Q 029118 173 GF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vSS 192 (198)
+. ++.++.++| .++|=+|+
T Consensus 79 ~~s~~~~~~~~~~G-~~VIDlS~ 100 (346)
T TIGR01850 79 GVSAELAPELLAAG-VKVIDLSA 100 (346)
T ss_pred hHHHHHHHHHHhCC-CEEEeCCh
Confidence 32 666666777 78887776
No 305
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.78 E-value=0.00013 Score=66.69 Aligned_cols=73 Identities=15% Similarity=0.288 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC-----CceEEEEccCCCHHHHHHhhcCc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-----TYVESMAGDASNKKFLKTALRGV----- 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g-----~~vevV~GDl~D~~sL~~AL~Gv----- 164 (198)
++..|+|||++..+|..++..+..+|++|+++.|+.++..+. +. ..+.+..+|+.|.+++..++++.
T Consensus 32 ~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 32 PRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 447899999999999999999999999999999998764322 11 12558889999999988887543
Q ss_pred --cEEEEc
Q 029118 165 --RSIICP 170 (198)
Q Consensus 165 --DaVIh~ 170 (198)
|.+|||
T Consensus 112 ~~d~l~~c 119 (331)
T KOG1210|consen 112 PIDNLFCC 119 (331)
T ss_pred CcceEEEe
Confidence 888887
No 306
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.76 E-value=3.8e-05 Score=71.40 Aligned_cols=88 Identities=17% Similarity=0.257 Sum_probs=69.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH----CCCcEEEEEeCCcccccc-----------cCCceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~----~G~~VralvR~~~~a~~~-----------~g~~vevV~GDl~D~~sL~~AL~G 163 (198)
+--+.|-|||||+|..++++++. .|...-+..||+++..+. +...+ ++..|..|+++|.+-.+-
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~ 83 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ 83 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh
Confidence 34589999999999999999998 788888888998765321 12234 899999999999999999
Q ss_pred ccEEEEcC-----hh-HHHHHHHhCCCCeE
Q 029118 164 VRSIICPS-----EG-FISNAGSLKGVQHV 187 (198)
Q Consensus 164 vDaVIh~a-----~G-~lldAA~~~GVkRi 187 (198)
+..|++|. .| .++.||.++|..|+
T Consensus 84 ~~vivN~vGPyR~hGE~VVkacienG~~~v 113 (423)
T KOG2733|consen 84 ARVIVNCVGPYRFHGEPVVKACIENGTHHV 113 (423)
T ss_pred hEEEEeccccceecCcHHHHHHHHcCCcee
Confidence 99999882 23 37777777776553
No 307
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.72 E-value=0.0005 Score=60.49 Aligned_cols=75 Identities=20% Similarity=0.238 Sum_probs=60.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---------cCCceEEEEccCCCHHHHHHhh-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTAL----- 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---------~g~~vevV~GDl~D~~sL~~AL----- 161 (198)
....+.++||||+.-||+.++++|...|.+|....|+.+...+. -+..+..+..|+++.+..++++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987653211 1345889999999988766665
Q ss_pred ---cCccEEEEc
Q 029118 162 ---RGVRSIICP 170 (198)
Q Consensus 162 ---~GvDaVIh~ 170 (198)
-..|.+|+.
T Consensus 85 ~~~GkidiLvnn 96 (270)
T KOG0725|consen 85 KFFGKIDILVNN 96 (270)
T ss_pred HhCCCCCEEEEc
Confidence 237888876
No 308
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.71 E-value=0.00045 Score=62.50 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=75.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c--cCCceEEEEccCCCHHHHHHhh-------c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S--FGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~--~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
+..+..||||||.+.+|+.++.++.++|.++.+.+.|.+...+ . .| .+.....|++|++.+.+.. .
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3457789999999999999999999999988888888765321 1 13 5889999999988876554 4
Q ss_pred CccEEEEcC------------------------hh------HHHHHHHhCCCCeEEEEcccc
Q 029118 163 GVRSIICPS------------------------EG------FISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 163 GvDaVIh~a------------------------~G------~lldAA~~~GVkRiV~vSS~~ 194 (198)
.++.+|+.+ .+ .++..+.+..=.|||-++|+.
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~a 175 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVA 175 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhh
Confidence 678888752 01 156777888889999999863
No 309
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.69 E-value=0.00035 Score=63.73 Aligned_cols=87 Identities=13% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE---E--eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL---V--KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral---v--R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
...+|+|.||||++|+.+++.|.+++|++.-+ . |+..+.... . +.+++..++. .++++++|+||.+ .
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~-~~~~~v~~~~-----~~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-E-GRDYTVEELT-----EDSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-c-CceeEEEeCC-----HHHHcCCCEEEECCC
Confidence 35689999999999999999999888864444 2 332222111 1 2444444443 2356799999987 3
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. +...+.++|+ ++|=+|+
T Consensus 79 ~~~s~~~~~~~~~~g~-~VIDlS~ 101 (344)
T PLN02383 79 GSISKKFGPIAVDKGA-VVVDNSS 101 (344)
T ss_pred cHHHHHHHHHHHhCCC-EEEECCc
Confidence 333 5555555664 4554554
No 310
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.69 E-value=0.00021 Score=64.74 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=55.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEE------------EEccCCCHHHHHHhhcCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVES------------MAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vev------------V~GDl~D~~sL~~AL~GvD 165 (198)
+.+|+|+||||++|+++++.|..... ++++++++.+...........+ +...-.+++. ++++|
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~D 78 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDVD 78 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCCC
Confidence 46899999999999999999987644 8888866654332111100000 1111123433 46899
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCeEEEEc
Q 029118 166 SIICP-SEGF---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 166 aVIh~-a~G~---lldAA~~~GVkRiV~vS 191 (198)
.||.+ ..+. +++++.++|++.|.+.+
T Consensus 79 vVf~a~p~~~s~~~~~~~~~~G~~vIDls~ 108 (349)
T PRK08664 79 IVFSALPSDVAGEVEEEFAKAGKPVFSNAS 108 (349)
T ss_pred EEEEeCChhHHHHHHHHHHHCCCEEEECCc
Confidence 99876 3332 66777788987655544
No 311
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.69 E-value=0.00017 Score=63.79 Aligned_cols=73 Identities=8% Similarity=0.064 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCC---cccccc---c---CCceEEEEccCCCHHHHHHhhcCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMES---F---GTYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~---~~a~~~---~---g~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
..+++++|||| |.+|+.++..|...|++ |.++.|+. +++.+. + ...+.+...|+.|.+.+.++++.+|.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 34578999999 89999999999999987 99999986 343221 1 12355667899999899889999999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||++
T Consensus 203 lINa 206 (289)
T PRK12548 203 LVNA 206 (289)
T ss_pred EEEe
Confidence 9986
No 312
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.62 E-value=0.00035 Score=61.09 Aligned_cols=73 Identities=12% Similarity=0.208 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhh-------cCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL-------~GvDaVI 168 (198)
.+.+||||||+..||..+++++.+.|-+|.+..|+.++..+. ..+.+.-++.|+.|.++.++.+ -..+.+|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 456899999999999999999999999999999998765432 2356778899999988666554 3568888
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 84 NN 85 (245)
T COG3967 84 NN 85 (245)
T ss_pred ec
Confidence 76
No 313
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.00031 Score=63.25 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------------cccCCceEEEEccCCCHHHHHHhhcCc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------------ESFGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------------~~~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
.+++.-||||=||.=|++++..|+.+||+|+.+.|..+.-. ...+.......||++|...|.+.+.-+
T Consensus 26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 34567899999999999999999999999999999764311 112245788999999999999987544
Q ss_pred --cEEEEc-C-------------------hhH--HHHHHHhCCCC---eEEEEccccee
Q 029118 165 --RSIICP-S-------------------EGF--ISNAGSLKGVQ---HVILLSQGAVV 196 (198)
Q Consensus 165 --DaVIh~-a-------------------~G~--lldAA~~~GVk---RiV~vSS~~Vy 196 (198)
+-|+|. + .|+ +++|.+.+++. ||--.|+...|
T Consensus 106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEly 164 (376)
T KOG1372|consen 106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELY 164 (376)
T ss_pred CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhc
Confidence 344443 1 344 78888877653 33334555444
No 314
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.57 E-value=0.00011 Score=64.81 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----------cCCce------EEEEccCCCHHHHHHhh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYV------ESMAGDASNKKFLKTAL 161 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----------~g~~v------evV~GDl~D~~sL~~AL 161 (198)
.++|.|+| .|.+|..++..|+.+|++|++..|+++..... ...+. +.....+.-..++.+++
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~ 80 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAV 80 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhh
Confidence 45799999 99999999999999999999999987543210 00000 00000111112566788
Q ss_pred cCccEEEEc-Chh--H---HHHHHHhCCCCeEEEEccccee
Q 029118 162 RGVRSIICP-SEG--F---ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 162 ~GvDaVIh~-a~G--~---lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+++|.||.+ .+. . ++.......-.++++.||...+
T Consensus 81 ~~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~ 121 (308)
T PRK06129 81 ADADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL 121 (308)
T ss_pred CCCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence 999999987 211 1 4444444445566777776543
No 315
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.56 E-value=0.00017 Score=60.53 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=57.2
Q ss_pred HHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc----CccEEEEcC----------------hhH
Q 029118 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----------------EGF 174 (198)
Q Consensus 115 Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~----GvDaVIh~a----------------~G~ 174 (198)
++++|+++|++|.++.|+.++.. ..+++++|++|.+++.++++ ++|.|||++ .++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 46889999999999999876531 24678999999999998886 589999982 111
Q ss_pred --HHHHHHhC--CCCeEEEEccccee
Q 029118 175 --ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 175 --lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
+++++... .-.+||++||.+.|
T Consensus 76 ~~l~~~~~~~~~~~g~Iv~isS~~~~ 101 (241)
T PRK12428 76 RHLTEALLPRMAPGGAIVNVASLAGA 101 (241)
T ss_pred HHHHHHHHHhccCCcEEEEeCcHHhh
Confidence 44444321 22699999998765
No 316
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.55 E-value=0.00032 Score=65.30 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=55.7
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh
Q 029118 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (198)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A 160 (198)
..++++||||| +|.+|.+++++|..+|++|.++.++... . .+.+ +...|+++.+++.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P--TPAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c--CCCC--cEEEccCCHHHHHHH
Confidence 56789999999 9999999999999999999999887532 1 1222 345699998888877
Q ss_pred h----cCccEEEEc
Q 029118 161 L----RGVRSIICP 170 (198)
Q Consensus 161 L----~GvDaVIh~ 170 (198)
+ ..+|.+||+
T Consensus 261 v~~~~~~~DilI~~ 274 (399)
T PRK05579 261 VLAALPQADIFIMA 274 (399)
T ss_pred HHHhcCCCCEEEEc
Confidence 7 468999998
No 317
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.46 E-value=0.00096 Score=58.03 Aligned_cols=82 Identities=17% Similarity=0.081 Sum_probs=54.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCcEEEEE-eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C-hh--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S-EG-- 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~-~G~~Vralv-R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a-~G-- 173 (198)
++|.|+|++|.+|+.+++.+.+ .+.++.+++ ++++..... -..++...+.++++++++|+||.+ . ..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p~~~~ 74 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTTPEATL 74 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCCHHHHH
Confidence 6899999999999999988876 478888866 444433211 112333344566677789999966 2 12
Q ss_pred HHHHHHHhCCCCeEE
Q 029118 174 FISNAGSLKGVQHVI 188 (198)
Q Consensus 174 ~lldAA~~~GVkRiV 188 (198)
.++.+|.++|+.=++
T Consensus 75 ~~~~~al~~G~~vvi 89 (257)
T PRK00048 75 ENLEFALEHGKPLVI 89 (257)
T ss_pred HHHHHHHHcCCCEEE
Confidence 267777788854443
No 318
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.44 E-value=0.00062 Score=60.47 Aligned_cols=94 Identities=9% Similarity=0.043 Sum_probs=65.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
+..+++++|+|+ |.+|+.+++.|...|.+|.+..|++++.......+.+.+ +.+.+.+.++++|.||++.
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVint~P~~i 221 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVINTIPALV 221 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEEECCChHH
Confidence 445789999998 889999999999999999999998765432221122322 2346778889999999751
Q ss_pred ----------------------hhHHHHHHHhCCCCeEEEEcccce
Q 029118 172 ----------------------EGFISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----------------------~G~lldAA~~~GVkRiV~vSS~~V 195 (198)
.++=.++|++.|++.+..-+-.+.
T Consensus 222 i~~~~l~~~k~~aliIDlas~Pg~tdf~~Ak~~G~~a~~~~glPg~ 267 (287)
T TIGR02853 222 LTADVLSKLPKHAVIIDLASKPGGTDFEYAKKRGIKALLAPGLPGI 267 (287)
T ss_pred hCHHHHhcCCCCeEEEEeCcCCCCCCHHHHHHCCCEEEEeCCCCcc
Confidence 011127888888888765554443
No 319
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.43 E-value=0.00029 Score=60.66 Aligned_cols=70 Identities=26% Similarity=0.293 Sum_probs=59.2
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
....+..|+||||--.||+.++.+|...|.+|.++.|+++....+ -+.-++.+++|+.+-+.+.+++..+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v 75 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV 75 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc
Confidence 355778999999999999999999999999999999998765432 2334899999999999999998644
No 320
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.42 E-value=0.00075 Score=63.20 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCChHHHH--HHHHHHHCCCcEEEEEeCCcc---------------cc---cccCCceEEEEccCCCHHHH
Q 029118 98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AM---ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~--Vvr~Ll~~G~~VralvR~~~~---------------a~---~~~g~~vevV~GDl~D~~sL 157 (198)
.++++|||||++.+|.. +++.| .+|.+|.++.+..++ .. ...+..+..+.+|+++++.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 35799999999999999 89999 999999988853211 11 12244567889999999888
Q ss_pred HHhh-------cCccEEEEc
Q 029118 158 KTAL-------RGVRSIICP 170 (198)
Q Consensus 158 ~~AL-------~GvDaVIh~ 170 (198)
.+++ ..+|.+||.
T Consensus 119 ~~lie~I~e~~G~IDiLVnS 138 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYS 138 (398)
T ss_pred HHHHHHHHHhcCCCCEEEEC
Confidence 7765 368999997
No 321
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.40 E-value=0.00071 Score=62.02 Aligned_cols=81 Identities=16% Similarity=0.105 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-c----ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a----~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
..++++|+|+.+ +|..+++.|+++|++|.+..++... . .+....+++++.+|..| ..+.++|.||.+.
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence 467899999988 9999999999999999999887522 2 11112357888888876 3457899999872
Q ss_pred --hh-HHHHHHHhCCC
Q 029118 172 --EG-FISNAGSLKGV 184 (198)
Q Consensus 172 --~G-~lldAA~~~GV 184 (198)
.. -.+.+|++.|+
T Consensus 78 ~~~~~~~~~~a~~~~i 93 (450)
T PRK14106 78 VPLDSPPVVQAHKKGI 93 (450)
T ss_pred CCCCCHHHHHHHHCCC
Confidence 11 15555565554
No 322
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.39 E-value=0.00045 Score=62.45 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=46.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcccccccCCceEEEEccCCCH-----------HHHHHhhc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNK-----------KFLKTALR 162 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~a~~~~g~~vevV~GDl~D~-----------~sL~~AL~ 162 (198)
+|.||||+|++|++++..|..++. +++.+++++.. +..+....|+.|. ....++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~ 75 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM------KALEGVVMELQDCAFPLLKGVVITTDPEEAFK 75 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc------CccceeeeehhhhcccccCCcEEecChHHHhC
Confidence 799999999999999998887652 58888776510 1123334444444 35678999
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
|+|.|||+
T Consensus 76 ~aDiVVit 83 (323)
T cd00704 76 DVDVAILV 83 (323)
T ss_pred CCCEEEEe
Confidence 99999998
No 323
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.39 E-value=0.00085 Score=65.38 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=59.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
.+.|+|.| -|.+|+.+++.|.++|++++++.+|+++.......+..++.||.+|++.+++| ++.+++||.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 46788877 58899999999999999999999998876544345688999999999999865 5788999987
No 324
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.38 E-value=0.00029 Score=65.02 Aligned_cols=85 Identities=12% Similarity=0.062 Sum_probs=64.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
...++|-|||||.|..++++|..+|++-..-.||..+.. ..+++ +.-...+.+|+.+++.+.+++.|++|.
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~--~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP--EAAVFPLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc--cccccCCCCHHHHHHHHhcceEEEecccccc
Confidence 346899999999999999999999999966678887653 33454 444455666999999999999999982
Q ss_pred -hhH-HHHHHHhCCCC
Q 029118 172 -EGF-ISNAGSLKGVQ 185 (198)
Q Consensus 172 -~G~-lldAA~~~GVk 185 (198)
.|. ++++|..+|+.
T Consensus 84 ~~g~plv~aC~~~GTd 99 (382)
T COG3268 84 RYGEPLVAACAAAGTD 99 (382)
T ss_pred ccccHHHHHHHHhCCC
Confidence 232 66666666653
No 325
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.37 E-value=0.00066 Score=52.89 Aligned_cols=85 Identities=15% Similarity=0.085 Sum_probs=53.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCCc-ccc-----ccc---CCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKR-NAM-----ESF---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~~-~a~-----~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
++|.|.|++|.+|+.+++.+.+ .++++.+.+.... ... ... ..++.+ .+.++++++.+|.||.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-------~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-------TDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-------BS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc-------chhHHHhcccCCEEEE
Confidence 4799999999999999999999 7889777764333 110 000 111111 1466777877999987
Q ss_pred cC--hhH--HHHHHHhCCCCeEEEEc
Q 029118 170 PS--EGF--ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 170 ~a--~G~--lldAA~~~GVkRiV~vS 191 (198)
.. ... .++.|.++|+.-++-++
T Consensus 74 fT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp ES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred cCChHHhHHHHHHHHhCCCCEEEECC
Confidence 62 222 67777788877766554
No 326
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.31 E-value=0.00072 Score=61.09 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=52.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCCc-------------eEEEEccCCCHHHHHHhhcCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTY-------------VESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~~-------------vevV~GDl~D~~sL~~AL~GvD 165 (198)
++|+|+||||++|+++++.|..+. .+|.+++++........... .+...-++ +++ .++++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence 379999999999999999888765 68888865442221111100 01111111 222 457899
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCeEEEEcc
Q 029118 166 SIICP-SEGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 166 aVIh~-a~G~---lldAA~~~GVkRiV~vSS 192 (198)
.|+.+ ..+. +.+++.++|++ +|-+|+
T Consensus 76 vVf~a~p~~~s~~~~~~~~~~G~~-VIDlsg 105 (341)
T TIGR00978 76 IVFSALPSEVAEEVEPKLAEAGKP-VFSNAS 105 (341)
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCE-EEECCh
Confidence 99987 3332 56777778876 444443
No 327
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=97.19 E-value=0.002 Score=56.85 Aligned_cols=63 Identities=16% Similarity=0.241 Sum_probs=49.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcE-EEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRI-KALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~V-ralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
+.|+||||+-.||--+|++|+.. |.++ .+..|+++++.+. ..+++++++.|+++-+++.++.+
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~ 74 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQ 74 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHH
Confidence 45999999999999999999974 5544 4556778874211 25789999999999998888863
No 328
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.19 E-value=0.0022 Score=58.35 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=68.3
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc---------------------ccc------cccCCc--e
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM------ESFGTY--V 144 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~---------------------~a~------~~~g~~--v 144 (198)
+.....+|+|.|+ |-+|+++++.|...|+ +++++.++.- ++. ....+. +
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i 98 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI 98 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence 3566778999997 5699999999999998 6777776641 100 011233 5
Q ss_pred EEEEccCCCHHHHHHhhcCccEEEEcChh-----HHHHHHHhCCCCeEEEEccccee
Q 029118 145 ESMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 145 evV~GDl~D~~sL~~AL~GvDaVIh~a~G-----~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+.+..|++ ++.+.+.++++|.||.+... .+-++|++.++. +|+.+..+.+
T Consensus 99 ~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip-~i~~~~~g~~ 153 (338)
T PRK12475 99 VPVVTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIP-WIYGGCVGSY 153 (338)
T ss_pred EEEeccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEecccE
Confidence 56777775 56788899999999988321 155778888865 5666655443
No 329
>PRK10537 voltage-gated potassium channel; Provisional
Probab=97.17 E-value=0.0036 Score=58.23 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=56.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
++.++|.|. |.+|+.++++|.++|++|.++..+.. ......+..++.||.+|++.|++| ++.+++||.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 457888886 68999999999999999999986532 233445688999999999999976 5889999976
No 330
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.17 E-value=0.00054 Score=53.94 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=54.8
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccccc---c-CCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~~---~-g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
+.+...++++|.|| |.+|+.++..|...|.+ |.++.|+.+++... + +..++++..+ .+.+++..+|.||
T Consensus 7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~~~~DivI 80 (135)
T PF01488_consen 7 FGDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE-----DLEEALQEADIVI 80 (135)
T ss_dssp HSTGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG-----GHCHHHHTESEEE
T ss_pred cCCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH-----HHHHHHhhCCeEE
Confidence 45677889999998 88999999999999987 99999998776432 3 2235555443 4557889999999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
++
T Consensus 81 ~a 82 (135)
T PF01488_consen 81 NA 82 (135)
T ss_dssp E-
T ss_pred Ee
Confidence 88
No 331
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.17 E-value=0.00043 Score=58.32 Aligned_cols=65 Identities=18% Similarity=0.125 Sum_probs=47.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC--------ce--EEEEccCCCHHHHHHhhcCccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--------YV--ESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~--------~v--evV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
|+|.|.||+|.+|+.+++.|.++||+|.+..|++++....... ++ .+... ...++++.+|.||.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~------~~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGA------DNAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEe------ChHHHHhcCCEEEE
Confidence 4799999999999999999999999999999988664322110 11 11111 22567888999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 75 a 75 (219)
T TIGR01915 75 A 75 (219)
T ss_pred E
Confidence 7
No 332
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.16 E-value=0.001 Score=60.13 Aligned_cols=64 Identities=17% Similarity=0.104 Sum_probs=46.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcccccccCCceEEEEccCCCHH-----------HHHHhhc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR 162 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~a~~~~g~~vevV~GDl~D~~-----------sL~~AL~ 162 (198)
+|.|+||+|++|.+++..|+.++. +++.+++++... ..+....|+.|.. ...++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------VLEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------ccceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999987553 588888755431 1233444555544 4468999
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.||++
T Consensus 75 ~aDiVVit 82 (324)
T TIGR01758 75 DVDVAILV 82 (324)
T ss_pred CCCEEEEc
Confidence 99999998
No 333
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.14 E-value=0.00071 Score=56.39 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=51.9
Q ss_pred cCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc----cccc-CCceEEEEccCCCHHHHHHhh--------cCccEEEEc
Q 029118 106 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (198)
Q Consensus 106 GAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~-g~~vevV~GDl~D~~sL~~AL--------~GvDaVIh~ 170 (198)
|++ +-||+.++++|+++|++|.+..|+.++. .+.. ..+.+++..|++|++++.+++ ..+|.+||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 666 9999999999999999999999998752 1111 122567999999999988874 567999986
No 334
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.12 E-value=0.00099 Score=60.61 Aligned_cols=69 Identities=17% Similarity=0.168 Sum_probs=54.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHH----HHHhhcCccEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKF----LKTALRGVRSII 168 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~s----L~~AL~GvDaVI 168 (198)
.=.+|||||..||+..+++|..+|.+|..+.|+.++... ..+-.+.++..|+++++. +++.+.+.|.=|
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 457899999999999999999999999999999987531 123347789999988765 777777776443
No 335
>PRK04148 hypothetical protein; Provisional
Probab=97.11 E-value=0.0023 Score=51.68 Aligned_cols=88 Identities=10% Similarity=0.043 Sum_probs=69.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-----h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-----E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-----~ 172 (198)
..++|++.|.. .|.+++..|.+.|++|.++..++..........++++.+|+.+|.. +.-+++|.|+... .
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCCHHHH
Confidence 34679999865 7778899999999999999998876544444468999999998764 3458999998762 3
Q ss_pred hHHHHHHHhCCCCeEEE
Q 029118 173 GFISNAGSLKGVQHVIL 189 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~ 189 (198)
-.+++.|++-++.-+|.
T Consensus 92 ~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 92 PFILELAKKINVPLIIK 108 (134)
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 34899999999887765
No 336
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.10 E-value=0.0035 Score=54.80 Aligned_cols=74 Identities=20% Similarity=0.207 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCC--ceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGT--YVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~--~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
...+..+||||+..||+++...|..+|++|.+..++...+.+ .++. +--.+.+|+.++.+++..|+ -.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 345678999999999999999999999999999988765432 2332 34568999999988877553 35
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
+.+++|
T Consensus 92 svlVnc 97 (256)
T KOG1200|consen 92 SVLVNC 97 (256)
T ss_pred cEEEEc
Confidence 777776
No 337
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.09 E-value=0.006 Score=53.51 Aligned_cols=89 Identities=16% Similarity=0.138 Sum_probs=70.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc----C-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP----S- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~----a- 171 (198)
+++|||.|||+- |+.+++.|.++|++|.+-+-....... ...++++.|-+.|.+.+.+-++ ++++||-. +
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~~~--~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~ 78 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGGPA--DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAA 78 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCCcc--cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence 468999999985 889999999999999998866543322 2457899999999999999995 88999955 2
Q ss_pred --hhHHHHHHHhCCCCeEEEE
Q 029118 172 --EGFISNAGSLKGVQHVILL 190 (198)
Q Consensus 172 --~G~lldAA~~~GVkRiV~v 190 (198)
..+..++|++.|+..+=|.
T Consensus 79 ~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 79 QISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHHHHHHHhCCcEEEEe
Confidence 2348899999988777654
No 338
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.09 E-value=0.0033 Score=53.59 Aligned_cols=91 Identities=16% Similarity=0.095 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce-EEEEccCCC-HHHHHHhhcCccEEEEcChhH-
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALRGVRSIICPSEGF- 174 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v-evV~GDl~D-~~sL~~AL~GvDaVIh~a~G~- 174 (198)
+..++||+||+|.+|+.+++.+...|.+|.+++|+++........++ .++ +..+ .+.+.+. .++|.|+++..+.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g~~~ 238 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI--DGSKFSEDVKKL-GGADVVIELVGSPT 238 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE--ecHHHHHHHHhc-cCCCEEEECCChHH
Confidence 45689999999999999999999999999999987754332211112 222 2221 2233333 3899999873221
Q ss_pred ---HHHHHHhCCCCeEEEEccc
Q 029118 175 ---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS~ 193 (198)
.+++.... .++|.++..
T Consensus 239 ~~~~~~~~~~~--g~~v~~g~~ 258 (332)
T cd08259 239 IEESLRSLNKG--GRLVLIGNV 258 (332)
T ss_pred HHHHHHHhhcC--CEEEEEcCC
Confidence 33333333 467776543
No 339
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.08 E-value=0.0079 Score=53.48 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=31.8
Q ss_pred cCCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 96 ~~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
+..+++++||||+ .-||++++++|.++|++|.+..|.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 3457899999995 899999999999999999886543
No 340
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=97.01 E-value=0.0031 Score=57.26 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=55.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
+++|+|.|+ |.+|+.++..+.+.|++|.++..++........ -+.+.+|+.|++.+.+..+.||+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 468999998 799999999999999999999876644322222 35677899999999999999998753
No 341
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.98 E-value=0.0011 Score=51.75 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++|+|+|+ |.+|+.+++.|.+.| ++|.+..|++++....... ....+..+..|. .++++++|.||++
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~ 88 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINT 88 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeC
Confidence 3568999998 999999999999986 7899999987654322110 111112233333 4457899999987
No 342
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.98 E-value=0.007 Score=55.09 Aligned_cols=99 Identities=18% Similarity=0.217 Sum_probs=70.0
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc---------------------ccc------cccCCc--e
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM------ESFGTY--V 144 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~---------------------~a~------~~~g~~--v 144 (198)
......+|+|.|+ |.+|++++..|...|. +++++.++.- ++. ..+.+. +
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 4566788999998 8999999999999998 7888877630 100 111233 4
Q ss_pred EEEEccCCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEccccee
Q 029118 145 ESMAGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 145 evV~GDl~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+.+..+++ ++.+.+.++++|.||.+. .. .+-++|.+.++. +||.++.+.|
T Consensus 99 ~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~~g~~ 153 (339)
T PRK07688 99 EAIVQDVT-AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGACVGSY 153 (339)
T ss_pred EEEeccCC-HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeeeeee
Confidence 55666764 456777899999999883 21 267888888854 6777766554
No 343
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.94 E-value=0.0025 Score=58.47 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|+ |-+|+.+++.|...|.+|.++.|++++........-..+..+..+++.+.+++.++|.||.+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEc
Confidence 4566999987 99999999999999999999998876543221111122345667888999999999999976
No 344
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.91 E-value=0.0011 Score=53.40 Aligned_cols=64 Identities=9% Similarity=-0.034 Sum_probs=43.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.+.|- |..|+.+++.|+++||+|.+..|++++.......+++.. ++..++++.+|.||.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhcccceEee
Confidence 467888886 999999999999999999999999876644432333322 1345555666766655
No 345
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.89 E-value=0.011 Score=54.46 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCc---EEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~-~G~~---VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
+..+|.|.||||++|+.+++.|.. ...+ ++.+....+.-+ -.+... ++..-++ |++ .+.++|.||.+ .
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~-~l~v~~~-~~~----~~~~~Divf~a~~ 77 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGR-EIIIQEA-KIN----SFEGVDIAFFSAG 77 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCc-ceEEEeC-CHH----HhcCCCEEEECCC
Confidence 346899999999999999998884 6777 666653322111 112111 2333333 333 35789999987 3
Q ss_pred hhH---HHHHHHhCC
Q 029118 172 EGF---ISNAGSLKG 183 (198)
Q Consensus 172 ~G~---lldAA~~~G 183 (198)
.+. +...+.++|
T Consensus 78 ~~~s~~~~~~~~~~G 92 (347)
T PRK06728 78 GEVSRQFVNQAVSSG 92 (347)
T ss_pred hHHHHHHHHHHHHCC
Confidence 333 555566666
No 346
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.88 E-value=0.0071 Score=56.15 Aligned_cols=88 Identities=16% Similarity=0.119 Sum_probs=53.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCc---EEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~-~G~~---VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G 173 (198)
.+|.|.||||++|+.+++.|++ +..+ ++.+......- ...+.. -+....+..|++. +.++|.||.+. .+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~~~ 76 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQGGD 76 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC-CcceEEecCChhH----hcCCCEEEECCCHH
Confidence 5799999999999999985555 4566 66655432111 112222 1233444555443 47899999873 22
Q ss_pred H---HHHHHHhCCCC-eEEEEcc
Q 029118 174 F---ISNAGSLKGVQ-HVILLSQ 192 (198)
Q Consensus 174 ~---lldAA~~~GVk-RiV~vSS 192 (198)
. +...+.++|++ .+|=.||
T Consensus 77 ~s~~~~~~~~~aG~~~~VID~Ss 99 (369)
T PRK06598 77 YTNEVYPKLRAAGWQGYWIDAAS 99 (369)
T ss_pred HHHHHHHHHHhCCCCeEEEECCh
Confidence 2 66666778876 3443443
No 347
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.86 E-value=0.0047 Score=57.46 Aligned_cols=69 Identities=14% Similarity=0.130 Sum_probs=53.0
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHH-HH
Q 029118 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT 159 (198)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL-~~ 159 (198)
..++++||||| ||.+|..++++|..+|++|.++.++.... .+.++ ...|+.+.+.+ ++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~~--~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPGV--KSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCCc--EEEEeccHHHHHHH
Confidence 56789999999 57899999999999999999998765432 22233 55788888887 43
Q ss_pred hh----cCccEEEEc
Q 029118 160 AL----RGVRSIICP 170 (198)
Q Consensus 160 AL----~GvDaVIh~ 170 (198)
++ ..+|++|++
T Consensus 258 ~~~~~~~~~D~~i~~ 272 (390)
T TIGR00521 258 ALNELAKDFDIFISA 272 (390)
T ss_pred HHHhhcccCCEEEEc
Confidence 33 368999987
No 348
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.84 E-value=0.0053 Score=51.64 Aligned_cols=59 Identities=10% Similarity=0.062 Sum_probs=38.7
Q ss_pred CCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh----hcCccEEEEc
Q 029118 107 GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICP 170 (198)
Q Consensus 107 ATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A----L~GvDaVIh~ 170 (198)
+||..|..+++++..+|++|+.+..+.. .. .+.+++++. +...+.+.++ +..+|++||+
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~--~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~a 89 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LP--PPPGVKVIR--VESAEEMLEAVKELLPSADIIIMA 89 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCcc-cc--ccccceEEE--ecchhhhhhhhccccCcceeEEEe
Confidence 5899999999999999999999987642 11 145677776 4454444444 4678999998
No 349
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.81 E-value=0.0069 Score=54.50 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
..+++|||+|+ |.+|+.+++.+.+.|++|.++..++........ -..+..|..|++.+.+.++ ++|+|+..
T Consensus 10 ~~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 10 PSATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh--hheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 35668999986 689999999999999999999877654222111 1357788999999999988 89999865
No 350
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.77 E-value=0.0037 Score=54.12 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=46.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----cccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|++...++||.||..++++|...||+|..-.|+.++.. ..+++. --..+..+|.+.+|.||..
T Consensus 1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLA 67 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL--------ITGGSNEDAAALADVVVLA 67 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc--------cccCChHHHHhcCCEEEEe
Confidence 45667888999999999999999999999966554321 223332 1223557799999999987
No 351
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.77 E-value=0.0027 Score=56.19 Aligned_cols=66 Identities=15% Similarity=0.061 Sum_probs=53.4
Q ss_pred CCeEEEEc-CCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhcCc
Q 029118 99 RDAVLVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 99 ~~~ILVTG-ATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
.+.||||| +.|.||.+|++++.++|+.|.|..|+.++-..+. ..++.....|+++++.+.+....+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~ev 74 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEV 74 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHH
Confidence 34677776 5699999999999999999999999887654332 345889999999999998877543
No 352
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.69 E-value=0.0053 Score=48.97 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=47.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc----------cccCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM----------ESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
++|.|+||+|.+|++++..|..++ .+++.+.+++..+. ...+..+.+..++ .++++++|.|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence 589999999999999999999886 47999988764432 1111234444444 5679999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
|.+
T Consensus 74 vit 76 (141)
T PF00056_consen 74 VIT 76 (141)
T ss_dssp EET
T ss_pred EEe
Confidence 987
No 353
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.68 E-value=0.0029 Score=56.06 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccC-CceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFG-TYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g-~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++.++|||+.|.||+.+.++|+++|..+.++.-+.+... +..+ ..+-+++.|+++...++++++ -
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 4788999999999999999999999999988876554421 1122 357889999999999999985 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+|+-
T Consensus 84 iDIlINg 90 (261)
T KOG4169|consen 84 IDILING 90 (261)
T ss_pred eEEEEcc
Confidence 5888765
No 354
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=96.67 E-value=0.018 Score=51.66 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEc-ChhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~-a~G~ 174 (198)
..+|+|-|-||++|+.+.+.|++.|.++++-| +|.+ ..+.++ +. =..++.++-+. +|.++.+ ....
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V-~p~~~~~~v~G--~~-------~y~sv~dlp~~~~~Dlavi~vpa~~ 75 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--LP-------VFDSVKEAVEETGANASVIFVPAPF 75 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEE-CCCCCcceecC--ee-------ccCCHHHHhhccCCCEEEEecCHHH
Confidence 45799999999999999999999999977766 4542 222223 11 12344555554 7888776 2222
Q ss_pred ---HHHHHHhCCCCeEEEEccc
Q 029118 175 ---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS~ 193 (198)
.++.|.++||+.+|.+|+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~G 97 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEG 97 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCC
Confidence 5666777899999998874
No 355
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.67 E-value=0.0043 Score=53.26 Aligned_cols=62 Identities=8% Similarity=0.111 Sum_probs=43.6
Q ss_pred EEEc-CCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-------cCccEEEEc
Q 029118 103 LVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 170 (198)
Q Consensus 103 LVTG-ATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaVIh~ 170 (198)
.||. +||.||++++++|.++|++|.++.|+.. ... . .....|+.|.+++.+.+ ..+|++||+
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~-~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn 87 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LKP-E----PHPNLSIREIETTKDLLITLKELVQEHDILIHS 87 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-ccc-c----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3444 5999999999999999999998875321 111 0 11346788877766543 468999998
No 356
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=96.66 E-value=0.021 Score=50.14 Aligned_cols=88 Identities=16% Similarity=0.113 Sum_probs=66.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhh--cCccEEEEcC----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL--RGVRSIICPS---- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh~a---- 171 (198)
|+|||.|||+- |+.++..|.++|+ |.+-+-..-..... ..+.++++.|-+.|.+.+.+-+ +++++||-..
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence 68999999986 7899999999999 66665433222111 2246789999999999999999 5899999652
Q ss_pred ---hhHHHHHHHhCCCCeEEE
Q 029118 172 ---EGFISNAGSLKGVQHVIL 189 (198)
Q Consensus 172 ---~G~lldAA~~~GVkRiV~ 189 (198)
..+..++|++.|+..+-|
T Consensus 79 ~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 79 AEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred HHHHHHHHHHHhhcCcceEEE
Confidence 234788899888877655
No 357
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.61 E-value=0.0049 Score=53.90 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEcc-CCCH-HHHHHhh-cCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGD-ASNK-KFLKTAL-RGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GD-l~D~-~sL~~AL-~GvDaVIh~ 170 (198)
.++++|||+||+|.+|..++..+...|.+|.++++++++.... ++. -+++..+ -.+. +.+.+.. .|+|.||.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa-~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF-DDAFNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-ceeEEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 3467999999999999999998888999999999887654322 332 1222211 1121 2223222 478999987
Q ss_pred C
Q 029118 171 S 171 (198)
Q Consensus 171 a 171 (198)
.
T Consensus 229 ~ 229 (338)
T cd08295 229 V 229 (338)
T ss_pred C
Confidence 3
No 358
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.58 E-value=0.018 Score=51.80 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (198)
.++.+|||+||+|-+|...+..+.+.|+.+.+.+.+.++.......+...+. |+.+. +.+++.. +|+|.|+.+.
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECC
Confidence 3478999999999999999988888898877777666544322222222221 23332 2333444 3699999884
Q ss_pred hhH----HHHHHHhCCCCeEEEEccc
Q 029118 172 EGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
-+. .+++ ...+ .|+|.+...
T Consensus 220 G~~~~~~~l~~-l~~~-G~lv~ig~~ 243 (326)
T COG0604 220 GGDTFAASLAA-LAPG-GRLVSIGAL 243 (326)
T ss_pred CHHHHHHHHHH-hccC-CEEEEEecC
Confidence 322 2333 3344 677766543
No 359
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=96.58 E-value=0.02 Score=48.54 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHH---hh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT---AL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~---AL--~GvDaVIh~a~ 172 (198)
+..+++|+|+++-+|..+++.+...|++|.+.+++.++.......+... ..|..+.+.... .. .++|.++++..
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g 244 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG 244 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence 4568999999999999999999999999999988765432211111111 124444433332 22 36899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEccc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS~ 193 (198)
+. .++..+.. .++|.+++.
T Consensus 245 ~~~~~~~~~~l~~~--G~~v~~~~~ 267 (342)
T cd08266 245 AATWEKSLKSLARG--GRLVTCGAT 267 (342)
T ss_pred HHHHHHHHHHhhcC--CEEEEEecC
Confidence 22 34444433 578887754
No 360
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.56 E-value=0.0079 Score=53.55 Aligned_cols=69 Identities=10% Similarity=0.019 Sum_probs=51.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...+++++|.|+ |.+|+.+++.|...|.+|.+..|++++.......+.+++ +.+.+.+.++++|.||.+
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 345789999997 889999999999999999999998755322212223433 234677888999999986
No 361
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.55 E-value=0.014 Score=49.97 Aligned_cols=92 Identities=13% Similarity=0.066 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh-cCccEEEEcChh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSEG 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL-~GvDaVIh~a~G 173 (198)
++.+|||+||+|-+|..++..+...|.+|.+.++++++.......+++.+ .|..+. +.+.+.. .|+|.||.+..+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 46799999999999999999998899999999987765432211223222 123322 2233222 478999987322
Q ss_pred H----HHHHHHhCCCCeEEEEcc
Q 029118 174 F----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ~----lldAA~~~GVkRiV~vSS 192 (198)
. .++..+.. .|||.++.
T Consensus 222 ~~~~~~~~~l~~~--G~iv~~g~ 242 (329)
T cd08294 222 EFSSTVLSHMNDF--GRVAVCGS 242 (329)
T ss_pred HHHHHHHHhhccC--CEEEEEcc
Confidence 2 23333322 46666543
No 362
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.55 E-value=0.0024 Score=55.95 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=47.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCc--eEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTY--VESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~--vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
+..++++||+|+ |.+|+.++..|...| .+|.++.|+.+++... +... +++ +. .+.+++.++|.||+
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL----ELQEELADFDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc----cchhccccCCEEEE
Confidence 345678999997 999999999999999 7899999988765322 1111 111 11 22456678888887
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 192 a 192 (278)
T PRK00258 192 A 192 (278)
T ss_pred C
Confidence 6
No 363
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.53 E-value=0.0064 Score=55.74 Aligned_cols=52 Identities=15% Similarity=0.293 Sum_probs=42.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.||+|.+|+.+++.|..+||+|++..|++. +...+++.++|.||.+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVila 149 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVS 149 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEe
Confidence 468999999999999999999999999999987531 1234566778888766
No 364
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=96.52 E-value=0.0074 Score=46.73 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=49.3
Q ss_pred CeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C---h
Q 029118 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E 172 (198)
Q Consensus 100 ~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a---~ 172 (198)
++|+|.||+ +..|..+++.|.++|++|..+ ++.. .+..+ ... . .++.+.-..+|.++.+ . .
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~V--np~~-~~i~G--~~~-y------~sl~e~p~~iDlavv~~~~~~~ 68 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPV--NPKG-GEILG--IKC-Y------PSLAEIPEPIDLAVVCVPPDKV 68 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEE--STTC-SEETT--EE--B------SSGGGCSST-SEEEE-S-HHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEE--CCCc-eEECc--EEe-e------ccccCCCCCCCEEEEEcCHHHH
Confidence 479999998 779999999999999999887 4433 12222 221 1 1233323677888776 2 2
Q ss_pred hHHHHHHHhCCCCeEEEEcc
Q 029118 173 GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~vSS 192 (198)
..+++.|.+.|++.+++.++
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT
T ss_pred HHHHHHHHHcCCCEEEEEcc
Confidence 23778888889999998876
No 365
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=96.52 E-value=0.011 Score=52.96 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=54.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
+|+|.| +|..|+.+++.+.+.|++|.++..++......+. -+.+..|..|++.+.+.++ ++|+|+..
T Consensus 1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC--ceEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 589999 5999999999999999999999987754322222 2567789999999998887 89998754
No 366
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.50 E-value=0.0035 Score=58.23 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=52.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+.++|+|.|+ |.+|+.+++.|...| .+|++..|+++++... ++ ...+ +.+.+.+++.++|.||.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g--~~~i-----~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG--GEAV-----KFEDLEEYLAEADIVISS 247 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--CeEe-----eHHHHHHHHhhCCEEEEC
Confidence 466789999997 999999999999999 7899999988764322 22 1222 335778889999999987
No 367
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.49 E-value=0.0094 Score=50.15 Aligned_cols=40 Identities=10% Similarity=0.093 Sum_probs=34.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
+..+++|+|+|. |.+|+++++.|.+.|++|.+..+++++.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~ 64 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAV 64 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 456789999998 6999999999999999999888876543
No 368
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=96.45 E-value=0.04 Score=53.63 Aligned_cols=75 Identities=12% Similarity=0.153 Sum_probs=58.2
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.++..+++|+|.|+. .+|+.++..+.+.|++|.++..++......+. -+.+.+++.|++.+.+..+.+|+|...
T Consensus 16 ~~~~~~~k~IgIIGgG-qlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A--D~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 16 PVHGVSETVVGVLGGG-QLGRMLCQAASQMGIKVKVLDPLEDCPASSVA--ARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred cccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 3444677889999975 99999999999999999999877653222222 246679999999999999889987543
No 369
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.45 E-value=0.015 Score=52.77 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=48.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH--
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF-- 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~-- 174 (198)
+.+|.|.||||++|+.+++.|.++. .++..+..+... ++.+ ....++++|.||.+ ..+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s~ 64 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAAR 64 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHHH
Confidence 4689999999999999999887654 244444432221 1111 23456789999987 3343
Q ss_pred -HHHHHHhCCCCeEEEEcc
Q 029118 175 -ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 -lldAA~~~GVkRiV~vSS 192 (198)
++..+.++|+ +||=+|+
T Consensus 65 ~~~~~~~~~g~-~VIDlSa 82 (313)
T PRK11863 65 EAVALIDNPAT-RVIDAST 82 (313)
T ss_pred HHHHHHHhCCC-EEEECCh
Confidence 5555556665 4665554
No 370
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.45 E-value=0.031 Score=51.16 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Ch
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (198)
...+|.|.||||++|+.+++.|.++.| +++.+..+.+.-+ -.+... ++..-++. ...+.++|.||.+ ..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~-~~~v~~~~-----~~~~~~~Dvvf~a~p~ 76 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGK-SVTVQDAA-----EFDWSQAQLAFFVAGR 76 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCc-ceEEEeCc-----hhhccCCCEEEECCCH
Confidence 356899999999999999998888655 5666653322111 112111 11111321 1234789999987 33
Q ss_pred hH---HHHHHHhCCCCeEEEEcc
Q 029118 173 GF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vSS 192 (198)
+. +...+.++|+ ++|=+|+
T Consensus 77 ~~s~~~~~~~~~~g~-~VIDlS~ 98 (336)
T PRK08040 77 EASAAYAEEATNAGC-LVIDSSG 98 (336)
T ss_pred HHHHHHHHHHHHCCC-EEEECCh
Confidence 33 5555566676 3554443
No 371
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.43 E-value=0.027 Score=47.30 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=65.9
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc-------------------ccc------cccCCceEE--
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAM------ESFGTYVES-- 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~-------------------~a~------~~~g~~vev-- 146 (198)
....+.+|+|.| .|-+|+++++.|...|. +++++.++.- ++. ..+.+++++
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 95 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA 95 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 466778899998 67799999999999997 7888876521 100 112344443
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEcccce
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~V 195 (198)
+...+ +.+.+.+.++++|.||.+. .. .+-++|+++++ .+|+.+..+.
T Consensus 96 ~~~~i-~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~i-p~i~~~~~g~ 147 (202)
T TIGR02356 96 LKERV-TAENLELLINNVDLVLDCTDNFATRYLINDACVALGT-PLISAAVVGF 147 (202)
T ss_pred ehhcC-CHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeccC
Confidence 44444 4467788899999999883 11 26678888886 4666665443
No 372
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.42 E-value=0.0062 Score=57.04 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=47.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|.||+|.+|+.+++.|..+|++|.+..|+++..... ...++++ .....+++.++|.||.+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIla 65 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIIS 65 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEe
Confidence 4799999999999999999999999999999987653211 1112221 12345678889999876
No 373
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.36 E-value=0.037 Score=47.57 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCH-HHHHHhh-cCccEEEEcCh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNK-KFLKTAL-RGVRSIICPSE 172 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~-~sL~~AL-~GvDaVIh~a~ 172 (198)
.+.++|+|+||+|-+|+.++..+...|.+|.++++++++.... ++. -.++..+-.+. ..+.... +++|.||.+..
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g 216 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGC-DRPINYKTEDLGEVLKKEYPKGVDVVYESVG 216 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCC-ceEEeCCCccHHHHHHHhcCCCCeEEEECCc
Confidence 3467899999999999999999999999999998876543222 221 12232222221 1222211 57899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEccc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS~ 193 (198)
+. .++..... .++|.+++.
T Consensus 217 ~~~~~~~~~~l~~~--g~~v~~g~~ 239 (329)
T cd08250 217 GEMFDTCVDNLALK--GRLIVIGFI 239 (329)
T ss_pred HHHHHHHHHHhccC--CeEEEEecc
Confidence 22 33333333 467766543
No 374
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.36 E-value=0.012 Score=48.68 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=45.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+..+++|||.|+.+.+|..+++.|.++|.+|.+..|+. +.+.+.+..+|.||.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEc
Confidence 467889999999977889999999999999988888753 3456677888888876
No 375
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.36 E-value=0.0059 Score=54.58 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCc--EEEEEeCC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDK 133 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~--VralvR~~ 133 (198)
++|.|+||||.+|.+++..|+..|+. |.+++|++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 57999999999999999999999875 99999854
No 376
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.36 E-value=0.0048 Score=54.99 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=50.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+.++|+|.|+ |.+|+.+++.|...| ++|.+..|+++++... ++ ..+ .+.+.+.+++..+|.||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g--~~~-----~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG--GNA-----VPLDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC--CeE-----EeHHHHHHHHhcCCEEEEC
Confidence 46789999998 999999999998866 6788899987654322 23 222 2345678889999999988
No 377
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=96.35 E-value=0.0075 Score=52.32 Aligned_cols=73 Identities=8% Similarity=0.023 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceE-EEEccC-CCHHHHHHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SMAGDA-SNKKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~ve-vV~GDl-~D~~sL~~AL--~GvDaVIh~ 170 (198)
++.+|||+||+|.+|..++..+...|.+|.+.++++++.......+++ ++..+- .+.....+.+ +|+|.||.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~ 214 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDN 214 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEEC
Confidence 467999999999999999988888999999999877654322112232 222211 1222222222 478999987
No 378
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.35 E-value=0.021 Score=52.39 Aligned_cols=82 Identities=12% Similarity=0.037 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc----ccccCCceEEEEccCCCHHHHHHhhc-CccEEEEc-C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP-S 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~g~~vevV~GDl~D~~sL~~AL~-GvDaVIh~-a 171 (198)
.+++++|||+.| +|..+++.|.++|++|.+..++.... ......++++..+... .. .+. ++|.||.. .
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s~g 77 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKNPG 77 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEECCC
Confidence 457899999988 99999999999999999998765321 1122234666655422 22 133 48988875 1
Q ss_pred ---hhHHHHHHHhCCCC
Q 029118 172 ---EGFISNAGSLKGVQ 185 (198)
Q Consensus 172 ---~G~lldAA~~~GVk 185 (198)
...++++|++.|++
T Consensus 78 i~~~~~~~~~a~~~~i~ 94 (447)
T PRK02472 78 IPYTNPMVEKALEKGIP 94 (447)
T ss_pred CCCCCHHHHHHHHCCCc
Confidence 23367777777654
No 379
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.34 E-value=0.0051 Score=57.17 Aligned_cols=67 Identities=25% Similarity=0.296 Sum_probs=51.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.++++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++... ++ . ++.+.+.+.+++.++|.||.+
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g--~-----~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG--G-----EAIPLDELPEALAEADIVISS 249 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--C-----cEeeHHHHHHHhccCCEEEEC
Confidence 356789999987 9999999999999997 788899987664322 22 1 233345677889999999987
No 380
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.33 E-value=0.0051 Score=53.61 Aligned_cols=71 Identities=14% Similarity=0.121 Sum_probs=47.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEE-----EccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESM-----AGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV-----~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|+ |.+|..++..|..+|++|.++.|+++...... +...... ...+.-..+..++++++|.||.+
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVA 78 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEe
Confidence 467999985 99999999999999999999999875543211 1000000 00111122445678899999987
No 381
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=96.33 E-value=0.008 Score=54.06 Aligned_cols=97 Identities=14% Similarity=0.109 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEE--e-CCcccccccCCceEEEEccCCCHHHHHHhh--cCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV--K-DKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vralv--R-~~~~a~~~~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh~ 170 (198)
....+|||||+-|.+|..++..|..+ |-+-+.+. + ++.... ..| .++..|+.|...|++.+ ..+|-+||.
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~-~~G---PyIy~DILD~K~L~eIVVn~RIdWL~Hf 117 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT-DVG---PYIYLDILDQKSLEEIVVNKRIDWLVHF 117 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc-ccC---CchhhhhhccccHHHhhcccccceeeeH
Confidence 34557999999999999999887654 55544443 2 222211 123 46788999999999887 456888886
Q ss_pred -C------------------hh--HHHHHHHhCCCCeEEEEcccceecC
Q 029118 171 -S------------------EG--FISNAGSLKGVQHVILLSQGAVVCL 198 (198)
Q Consensus 171 -a------------------~G--~lldAA~~~GVkRiV~vSS~~Vy~~ 198 (198)
+ .| ++++.|+++..+-|| -|+++++++
T Consensus 118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGP 165 (366)
T KOG2774|consen 118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGP 165 (366)
T ss_pred HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCC
Confidence 1 22 389999999887655 467777653
No 382
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.28 E-value=0.031 Score=49.41 Aligned_cols=90 Identities=18% Similarity=0.109 Sum_probs=54.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC---CcccccccCCceEEEEccCCCHHHH-HHhhcCccEEEEcC--
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFGTYVESMAGDASNKKFL-KTALRGVRSIICPS-- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~---~~~a~~~~g~~vevV~GDl~D~~sL-~~AL~GvDaVIh~a-- 171 (198)
++.+|||+|+ |-+|...+..+...|.+|.++.|+ +++.......+++.+ |..+.+.. .....++|.||-+.
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence 5678999986 999999998888899999999983 333221111224443 33221111 12346799999873
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
..+ .++.++..| ++|.++.
T Consensus 249 ~~~~~~~~~~l~~~G--~~v~~G~ 270 (355)
T cd08230 249 PPLAFEALPALAPNG--VVILFGV 270 (355)
T ss_pred HHHHHHHHHHccCCc--EEEEEec
Confidence 212 344444444 6776654
No 383
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.25 E-value=0.015 Score=43.82 Aligned_cols=78 Identities=12% Similarity=0.219 Sum_probs=53.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E-- 172 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~-- 172 (198)
+..+++|||.|+ |.+|.+-++.|++.|.+|+++..+.+.. ...+++..-.+ +.-+++++.||.+. .
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~----~~~i~~~~~~~------~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFS----EGLIQLIRREF------EEDLDGADLVFAATDDPE 72 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHH----HTSCEEEESS-------GGGCTTESEEEE-SS-HH
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhh----hhHHHHHhhhH------HHHHhhheEEEecCCCHH
Confidence 456789999998 9999999999999999999998764111 13466665554 34489999999773 1
Q ss_pred --hHHHHHHHhCCC
Q 029118 173 --GFISNAGSLKGV 184 (198)
Q Consensus 173 --G~lldAA~~~GV 184 (198)
..+.+.|++.|+
T Consensus 73 ~n~~i~~~a~~~~i 86 (103)
T PF13241_consen 73 LNEAIYADARARGI 86 (103)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhhCCE
Confidence 126777776653
No 384
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=96.24 E-value=0.045 Score=49.18 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEc-Chh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEG 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~-a~G 173 (198)
.+.+|+|-|-||.+|+.+++.|++.|+++...| +|.. ..+.++ + .-..++.++-+. +|.+|.+ ...
T Consensus 7 ~~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pV-np~~~~~~v~G--~-------~~y~sv~dlp~~~~~DlAvi~vp~~ 76 (291)
T PRK05678 7 KDTKVIVQGITGKQGTFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--L-------PVFNTVAEAVEATGANASVIYVPPP 76 (291)
T ss_pred CCCeEEEeCCCchHHHHHHHHHHHCCCCEEEEE-CCCCCCCeEeC--e-------eccCCHHHHhhccCCCEEEEEcCHH
Confidence 456899999999999999999999898844455 5542 222233 1 222345555554 8988776 222
Q ss_pred H---HHHHHHhCCCCeEEEEccc
Q 029118 174 F---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS~ 193 (198)
. .++.|.++||+.+|.+|+.
T Consensus 77 ~v~~~l~e~~~~gvk~avI~s~G 99 (291)
T PRK05678 77 FAADAILEAIDAGIDLIVCITEG 99 (291)
T ss_pred HHHHHHHHHHHCCCCEEEEECCC
Confidence 2 6677778999999999874
No 385
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.23 E-value=0.02 Score=52.10 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=47.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH---
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF--- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~--- 174 (198)
.+|.|.||||++|..++|.|..+ ..++..+.-+.. + +..+ ..+.++++|.||.+ ..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-----~---------~~~~---~~~~~~~~D~vFlalp~~~s~~ 64 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-----K---------DAAE---RAKLLNAADVAILCLPDDAARE 64 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-----c---------CcCC---HhHhhcCCCEEEECCCHHHHHH
Confidence 47999999999999999988765 234555532211 1 1112 34566889999987 3333
Q ss_pred HHHHHHhCCCCeEEEEcc
Q 029118 175 ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 lldAA~~~GVkRiV~vSS 192 (198)
++..+.++|+ +||=+|+
T Consensus 65 ~~~~~~~~g~-~VIDlSa 81 (310)
T TIGR01851 65 AVSLVDNPNT-CIIDAST 81 (310)
T ss_pred HHHHHHhCCC-EEEECCh
Confidence 5555556665 4665664
No 386
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.17 E-value=0.034 Score=47.30 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a~ 172 (198)
+..+|+|+|++|-+|..++..+...|.+|.++++++++.......++..+ .+..++ ..+.+.. +++|.|+.+..
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA-VDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 46789999999999999999999999999999987755332211122221 123332 3344444 46899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEcc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS 192 (198)
+. .+++.... .++|.++.
T Consensus 221 ~~~~~~~~~~l~~~--g~~v~~g~ 242 (324)
T cd08244 221 GAIGRAALALLAPG--GRFLTYGW 242 (324)
T ss_pred hHhHHHHHHHhccC--cEEEEEec
Confidence 21 33333333 46776653
No 387
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.17 E-value=0.013 Score=42.47 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=45.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC---CcEEEE-EeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G---~~Vral-vR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|. |+|.+|..+++.|++.| ++|... .|++++..+... -.++++.. +..++++.+|.||.+
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvila 68 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILA 68 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEE
Confidence 46677 89999999999999999 999965 888877643311 11333332 246677899999987
No 388
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=96.15 E-value=0.019 Score=51.35 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=52.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
+|+|.|+ |.+|+.++..+.+.|++|.++..++......+. -+.+.+|+.|++.+.+..+.||.|.
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a--d~~~~~~~~d~~~i~~~a~~~dvit 65 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQVA--DHVVLAPFFDPAAIRELAESCDVIT 65 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC--ceeEeCCCCCHHHHHHHHhhCCEEE
Confidence 4889998 799999999999999999999876644322222 2456889999999999999998764
No 389
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.12 E-value=0.012 Score=51.98 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=49.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|..+++.|.++||+|.+..|++++.......++.. ..+++.+.++++.+|.||.+
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~ 66 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVM 66 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEE
Confidence 3688888 599999999999999999999999887654332222221 24666777778889999877
No 390
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.11 E-value=0.07 Score=47.98 Aligned_cols=66 Identities=14% Similarity=0.253 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc----cc-----cCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~----~~-----~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
...++|.|+|| |.+|.+++..|+..+. ++..+.++.+.+. .. +...+.+..+| .++++++|
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~-------~~~~~~ad 75 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGD-------YSDCKDAD 75 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCC-------HHHhCCCC
Confidence 45569999998 9999999999998887 7888888765432 11 11233333222 35689999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||.+
T Consensus 76 ivIit 80 (315)
T PRK00066 76 LVVIT 80 (315)
T ss_pred EEEEe
Confidence 99987
No 391
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=96.11 E-value=0.021 Score=49.58 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=46.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc---cCCceEEEEccCCC-HHHHHHhh-cCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASN-KKFLKTAL-RGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~---~g~~vevV~GDl~D-~~sL~~AL-~GvDaVIh~ 170 (198)
++|||+||+|-+|..++..+...|. +|.++++++++.... ++. -+++..+-.+ .+.+.+.. +|+|.||.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa-~~vi~~~~~~~~~~i~~~~~~gvd~vid~ 231 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF-DAAINYKTDNVAERLRELCPEGVDVYFDN 231 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC-cEEEECCCCCHHHHHHHHCCCCceEEEEC
Confidence 7999999999999999988888998 799998877654321 442 1223221122 12233322 479999987
No 392
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.10 E-value=0.021 Score=48.28 Aligned_cols=69 Identities=7% Similarity=0.130 Sum_probs=50.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|||.|| |.+|...++.|++.|++|+++.++..+. ..... ..+++..-.+. ..-+.++|.||.+
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaa 77 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAA 77 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEc
Confidence 567789999998 9999999999999999999997654332 12221 23666554433 2347889999887
No 393
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.10 E-value=0.013 Score=50.42 Aligned_cols=69 Identities=7% Similarity=-0.001 Sum_probs=44.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCC----CHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~----D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|.|+ |.+|..++..|.+.|++|.++.|+++........++.+-.++.. -.....++ +.+|.||.+
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila 73 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILA 73 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEe
Confidence 46999997 99999999999999999999999765432221112211011110 01122333 789999887
No 394
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=96.07 E-value=0.026 Score=51.99 Aligned_cols=92 Identities=14% Similarity=0.227 Sum_probs=53.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCc---EEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhhcCccEEEEcChh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~---VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G 173 (198)
+++|.|.||||.+|+.+++.|-++... +.++....+.-. ..|.....-+.-++.|.. .++++|.||.++.+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~ 76 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG 76 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCcccccccc----ccccCCEEEEeCch
Confidence 367999999999999999988886543 444443222111 112211111222223322 34499999988433
Q ss_pred H----HHHHHHhCCCCeEEEEcccceec
Q 029118 174 F----ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 174 ~----lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
- +...+.++| .+.++-.++||
T Consensus 77 ~~s~~~~p~~~~~G---~~VIdnsSa~R 101 (334)
T COG0136 77 SVSKEVEPKAAEAG---CVVIDNSSAFR 101 (334)
T ss_pred HHHHHHHHHHHHcC---CEEEeCCcccc
Confidence 2 666677788 55566666655
No 395
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.06 E-value=0.074 Score=41.30 Aligned_cols=95 Identities=15% Similarity=0.167 Sum_probs=62.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcc---c-------ccc---------------cCCc--eEEEEcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A-------MES---------------FGTY--VESMAGD 150 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~---a-------~~~---------------~g~~--vevV~GD 150 (198)
..+|+|.|+ |-+|+.+++.|...|. +++.+..+.-. . ... ..+. ++.+.-+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 457888886 5699999999999998 56666643211 0 000 1133 4556666
Q ss_pred CCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEccccee
Q 029118 151 ASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 151 l~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+ +.+.+.+.++++|.||++. .. .+.+.|++.++ .+|+.+..+.+
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~g~~ 129 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVNGFY 129 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEETTE
T ss_pred c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence 6 5567788889999999882 11 26778898887 67777655543
No 396
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.04 E-value=0.016 Score=54.67 Aligned_cols=65 Identities=17% Similarity=0.058 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++++|.|. |.||+.++..|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~--------~l~eal~~aDVVI~a 274 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM--------TMEEAAELGDIFVTA 274 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec--------CHHHHHhCCCEEEEC
Confidence 46889999996 899999999999999999999888866533222233322 246778899999887
No 397
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.02 E-value=0.0077 Score=52.59 Aligned_cols=68 Identities=15% Similarity=0.121 Sum_probs=47.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-------CCceEEEEccC------------CCHHHHHHh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDA------------SNKKFLKTA 160 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-------g~~vevV~GDl------------~D~~sL~~A 160 (198)
++|.|.|+ |.+|..++..|..+|++|++..++++...... ...++ .+.+ .-..++.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVA--RGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 46899998 99999999999999999999999876543211 00110 0111 111346788
Q ss_pred hcCccEEEEc
Q 029118 161 LRGVRSIICP 170 (198)
Q Consensus 161 L~GvDaVIh~ 170 (198)
++++|.||.+
T Consensus 79 ~~~aD~Vi~a 88 (288)
T PRK09260 79 VADADLVIEA 88 (288)
T ss_pred hcCCCEEEEe
Confidence 9999999977
No 398
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.01 E-value=0.038 Score=46.86 Aligned_cols=83 Identities=16% Similarity=0.186 Sum_probs=59.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-cc-cCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS-E 172 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~ 172 (198)
+..+++|||.| .|.+|..-++.|++.|.+|+++..+..+.. .. ...+++++.+++... -+++++.||.+. .
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~-----dl~~~~lVi~at~d 79 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDAD-----ILEGAFLVIAATDD 79 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH-----HhCCcEEEEECCCC
Confidence 45677999998 488999999999999999999976554321 11 123699999998732 368999998772 1
Q ss_pred h----HHHHHHHhCCC
Q 029118 173 G----FISNAGSLKGV 184 (198)
Q Consensus 173 G----~lldAA~~~GV 184 (198)
. .+...|++.|+
T Consensus 80 ~~ln~~i~~~a~~~~i 95 (205)
T TIGR01470 80 EELNRRVAHAARARGV 95 (205)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 1 26677776653
No 399
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=95.99 E-value=0.053 Score=48.34 Aligned_cols=91 Identities=13% Similarity=0.109 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEcc-CCCH-HHHHHhh-cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGD-ASNK-KFLKTAL-RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GD-l~D~-~sL~~AL-~GvDaVIh~a 171 (198)
++++|||+||+|-+|..++..+...|.+|.+.++++++... .++. -+++..+ -.+. +.+.+.. .|+|.||.+.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa-~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~v 236 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-DEAFNYKEEPDLDAALKRYFPEGIDIYFDNV 236 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC-CEEEECCCcccHHHHHHHHCCCCcEEEEECC
Confidence 46799999999999999998888899999998887765432 2342 1223211 1122 2222222 3789999873
Q ss_pred hhH----HHHHHHhCCCCeEEEEc
Q 029118 172 EGF----ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 172 ~G~----lldAA~~~GVkRiV~vS 191 (198)
.+. .+++.+.. .|+|.+.
T Consensus 237 G~~~~~~~~~~l~~~--G~iv~~G 258 (348)
T PLN03154 237 GGDMLDAALLNMKIH--GRIAVCG 258 (348)
T ss_pred CHHHHHHHHHHhccC--CEEEEEC
Confidence 222 33333333 4676654
No 400
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.98 E-value=0.022 Score=49.62 Aligned_cols=64 Identities=9% Similarity=0.082 Sum_probs=44.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|..+|++|.+..|+++........+. +.....+ .++++++|.||.+
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~--~~~~~~~----~~~~~~aDlVila 64 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL--VDEASTD----LSLLKDCDLVILA 64 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC--cccccCC----HhHhcCCCEEEEc
Confidence 3688998 7999999999999999999999988765433221111 0000111 2357889999987
No 401
>PRK06849 hypothetical protein; Provisional
Probab=95.98 E-value=0.029 Score=50.89 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
.+++|||||+...+|.++++.|.++|++|.++..++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46799999999999999999999999999999877643
No 402
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=95.94 E-value=0.011 Score=53.56 Aligned_cols=72 Identities=19% Similarity=0.224 Sum_probs=54.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCc-----EEEEEeCCccccc------ccC----CceEEEEccCCCHHHHHHhhc-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTR-----IKALVKDKRNAME------SFG----TYVESMAGDASNKKFLKTALR- 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~-----VralvR~~~~a~~------~~g----~~vevV~GDl~D~~sL~~AL~- 162 (198)
++.+||||++..+|-.++.+|++...+ +.+..|+.+++.+ .+. ..+++|..|+++..++.+|.+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 577999999999999999999997543 4455688776532 122 258899999999999998864
Q ss_pred ------CccEEEEc
Q 029118 163 ------GVRSIICP 170 (198)
Q Consensus 163 ------GvDaVIh~ 170 (198)
-.|.|+..
T Consensus 83 i~~rf~~ld~iylN 96 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLN 96 (341)
T ss_pred HHHHhhhccEEEEc
Confidence 45777654
No 403
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.93 E-value=0.024 Score=50.13 Aligned_cols=36 Identities=6% Similarity=0.090 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.+++|.|.| +|.+|+.+++.|..+||+|++..|++.
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 356899995 699999999999999999999988753
No 404
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=95.92 E-value=0.075 Score=48.55 Aligned_cols=88 Identities=10% Similarity=0.037 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEc-ChhH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEGF 174 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~-a~G~ 174 (198)
...+|+|-|=||..|+.-+++.++.|-+|++-|-+...-.... ...+-=..++.++.+. +|..+.+ ...+
T Consensus 28 ~~t~v~vqGitg~~g~~h~~~~~~ygt~iv~GV~Pgkgg~~v~-------~~Gvpvy~sv~ea~~~~~~D~avI~VPa~~ 100 (317)
T PTZ00187 28 KNTKVICQGITGKQGTFHTEQAIEYGTKMVGGVNPKKAGTTHL-------KHGLPVFATVKEAKKATGADASVIYVPPPH 100 (317)
T ss_pred CCCeEEEecCCChHHHHHHHHHHHhCCcEEEEECCCCCCceEe-------cCCccccCCHHHHhcccCCCEEEEecCHHH
Confidence 3468999999999999999999999999999994433111111 1223334467777765 8988765 2222
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
.+..|.++|++.+|.+|+
T Consensus 101 v~dai~Ea~~aGI~~~Viite 121 (317)
T PTZ00187 101 AASAIIEAIEAEIPLVVCITE 121 (317)
T ss_pred HHHHHHHHHHcCCCEEEEECC
Confidence 445566789999999887
No 405
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.86 E-value=0.056 Score=50.27 Aligned_cols=82 Identities=20% Similarity=0.129 Sum_probs=50.1
Q ss_pred CeEEEEcCCChHHHHHHHHHH-HCCCc---EEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcCccEEEEcChh-
Q 029118 100 DAVLVTDGDSDIGQMVILSLI-VKRTR---IKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll-~~G~~---VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G- 173 (198)
++|.|.||||.+|+.+++.|. ++..+ ++++.-.... ....++ +.+...-++.+. +.+.++|.||.++.+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-~~~~~v~~~~~~----~~~~~vDivffa~g~~ 75 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDI----DALKALDIIITCQGGD 75 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-CCcceEEcCccc----ccccCCCEEEEcCCHH
Confidence 368999999999999999998 55655 4444422111 111221 122233343332 356899999998422
Q ss_pred ---HHHHHHHhCCCCe
Q 029118 174 ---FISNAGSLKGVQH 186 (198)
Q Consensus 174 ---~lldAA~~~GVkR 186 (198)
.+...+.++|..-
T Consensus 76 ~s~~~~p~~~~aG~~~ 91 (366)
T TIGR01745 76 YTNEIYPKLRESGWQG 91 (366)
T ss_pred HHHHHHHHHHhCCCCe
Confidence 2677778888753
No 406
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.84 E-value=0.075 Score=43.24 Aligned_cols=81 Identities=11% Similarity=0.100 Sum_probs=52.4
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h-
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E- 172 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~- 172 (198)
.+..+++|+|.| .|.+|.+.++.|++.|++|+++..+.......+ ..+++....+... -++++|.||.+. .
T Consensus 9 l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~~~~~l~~l-~~i~~~~~~~~~~-----dl~~a~lViaaT~d~ 81 (157)
T PRK06719 9 FNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPEICKEMKEL-PYITWKQKTFSND-----DIKDAHLIYAATNQH 81 (157)
T ss_pred EEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCccCHHHHhc-cCcEEEecccChh-----cCCCceEEEECCCCH
Confidence 366788899998 489999999999999999998843222111112 2455555444322 268899999872 1
Q ss_pred ---hHHHHHHHhC
Q 029118 173 ---GFISNAGSLK 182 (198)
Q Consensus 173 ---G~lldAA~~~ 182 (198)
-.+...|++.
T Consensus 82 e~N~~i~~~a~~~ 94 (157)
T PRK06719 82 AVNMMVKQAAHDF 94 (157)
T ss_pred HHHHHHHHHHHHC
Confidence 1255556553
No 407
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.81 E-value=0.07 Score=45.80 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccc--cccCCceEEEEccCCC-HHHHHHhh--cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~--~~~g~~vevV~GDl~D-~~sL~~AL--~GvDaVIh~a 171 (198)
+.++|||.|+ |-+|...+..+...|.+ |.++.+++++.. ..++ ++.+. |..+ .+.+.+.. +|+|.||.+.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~G--a~~~i-~~~~~~~~~~~~~~~~g~d~vid~~ 195 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFG--ATALA-EPEVLAERQGGLQNGRGVDVALEFS 195 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC--CcEec-CchhhHHHHHHHhCCCCCCEEEECC
Confidence 5779999987 89999999888888987 777766665432 2233 22221 2222 22333333 4789999872
Q ss_pred --hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 --EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 --~G~---lldAA~~~GVkRiV~vSS 192 (198)
... .++..+.. .++|.++.
T Consensus 196 G~~~~~~~~~~~l~~~--G~iv~~G~ 219 (280)
T TIGR03366 196 GATAAVRACLESLDVG--GTAVLAGS 219 (280)
T ss_pred CChHHHHHHHHHhcCC--CEEEEecc
Confidence 222 33444333 47777664
No 408
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=95.81 E-value=0.075 Score=45.24 Aligned_cols=90 Identities=17% Similarity=0.074 Sum_probs=54.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH-HHHHHhh--cCccEEEEcChhH--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEGF-- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~-~sL~~AL--~GvDaVIh~a~G~-- 174 (198)
.+|||.|++|-+|..++..+...|.+|.++.++.++.......+++.+. |..+. ..+.+.+ +++|.||.+..+.
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~ 226 (325)
T cd05280 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVL-DREDLLDESKKPLLKARWAGAIDTVGGDVL 226 (325)
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEE-cchhHHHHHHHHhcCCCccEEEECCchHHH
Confidence 5899999999999999998888999999998877553322111222221 22222 1223333 4689999873222
Q ss_pred --HHHHHHhCCCCeEEEEcc
Q 029118 175 --ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 --lldAA~~~GVkRiV~vSS 192 (198)
.+++.... .++|.++.
T Consensus 227 ~~~~~~l~~~--g~~v~~g~ 244 (325)
T cd05280 227 ANLLKQTKYG--GVVASCGN 244 (325)
T ss_pred HHHHHhhcCC--CEEEEEec
Confidence 33333333 46776653
No 409
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.80 E-value=0.17 Score=42.51 Aligned_cols=100 Identities=10% Similarity=0.143 Sum_probs=66.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcc---c------------------------ccccCCce--
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---A------------------------MESFGTYV-- 144 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~---a------------------------~~~~g~~v-- 144 (198)
......+|+|.|+.| +|.++++.|...|.. ++.+..+.-. . .....+.+
T Consensus 15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i 93 (198)
T cd01485 15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKL 93 (198)
T ss_pred HHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEE
Confidence 355677899999998 999999999999975 6666543210 0 00122444
Q ss_pred EEEEccCCC-HHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEccccee
Q 029118 145 ESMAGDASN-KKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 145 evV~GDl~D-~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+.+..++.+ .+...+.+..+|.||.+. .. .+-+.|+++++ .+|+.++.+.|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~i-p~i~~~~~G~~ 150 (198)
T cd01485 94 SIVEEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHI-PFISCATYGLI 150 (198)
T ss_pred EEEecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence 445555542 445566788999999882 22 26688899886 66777666554
No 410
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.80 E-value=0.032 Score=51.11 Aligned_cols=76 Identities=5% Similarity=0.050 Sum_probs=47.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEE---EEE---eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcChh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK---ALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~Vr---alv---R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G 173 (198)
.+|.| ||||.+|+.+++.|-+++.+|. .+. |...+. -.|+. -++..-++++ ..++++|.+|. +.+
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~-i~f~g-~~~~V~~l~~-----~~f~~vDia~f-ag~ 74 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQG-IRFNN-KAVEQIAPEE-----VEWADFNYVFF-AGK 74 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCE-EEECC-EEEEEEECCc-----cCcccCCEEEE-cCH
Confidence 46999 9999999999999988988655 333 323222 12321 2333334433 24689999988 433
Q ss_pred H----HHHHHHhCCC
Q 029118 174 F----ISNAGSLKGV 184 (198)
Q Consensus 174 ~----lldAA~~~GV 184 (198)
- +...+.++|.
T Consensus 75 ~~s~~~ap~a~~aG~ 89 (322)
T PRK06901 75 MAQAEHLAQAAEAGC 89 (322)
T ss_pred HHHHHHHHHHHHCCC
Confidence 2 4555666663
No 411
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=95.79 E-value=0.085 Score=45.94 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccccc--ccCCceEEEEccCCC--HHHHHHhhc--CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASN--KKFLKTALR--GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~--~~g~~vevV~GDl~D--~~sL~~AL~--GvDaVIh 169 (198)
.++++|||+|+ |-+|..++..+...|.+ |.++.+++++... .++ +..+ .|..+ .+.+.+... ++|.||.
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~g--a~~~-i~~~~~~~~~~~~~~~~~~~d~vid 237 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALG--ADFV-INSGQDDVQEIRELTSGAGADVAIE 237 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC--CCEE-EcCCcchHHHHHHHhCCCCCCEEEE
Confidence 34789999986 99999999988889998 9888877655322 233 2222 12222 445555554 6899998
Q ss_pred cC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 170 PS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
+. ... .++..+..| ++|.++.
T Consensus 238 ~~g~~~~~~~~~~~l~~~G--~~v~~g~ 263 (339)
T cd08239 238 CSGNTAARRLALEAVRPWG--RLVLVGE 263 (339)
T ss_pred CCCCHHHHHHHHHHhhcCC--EEEEEcC
Confidence 72 211 344444444 6776654
No 412
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.78 E-value=0.03 Score=50.88 Aligned_cols=71 Identities=7% Similarity=-0.054 Sum_probs=48.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------------cCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------------FGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------------~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
-++|.|.|+ |-+|+.++..++.+|++|++..++++..... .+.........+.-..++++++++||
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 357999986 9999999999999999999999887542210 00000001111222235778999999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||-+
T Consensus 86 lViEa 90 (321)
T PRK07066 86 FIQES 90 (321)
T ss_pred EEEEC
Confidence 99977
No 413
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=95.78 E-value=0.06 Score=44.82 Aligned_cols=73 Identities=21% Similarity=0.184 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (198)
+..+++|+|++|-+|+.++..+...|.+|.++.++.++.......+++.+ .+..+. ..+.+.. .++|.+|++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVA-INYRTEDFAEEVKEATGGRGVDVILDMV 216 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEE-EeCCchhHHHHHHHHhCCCCeEEEEECC
Confidence 46789999999999999999999999999999887654322111112211 222322 2233333 3689999873
No 414
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.77 E-value=0.0082 Score=47.78 Aligned_cols=68 Identities=13% Similarity=0.144 Sum_probs=40.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++.+|-|.|| |.+|.++.+.|..+||+|..+. |+++.+..... . .++ .....+.+.++.+|.||.+
T Consensus 7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~----~-~~~-~~~~~~~~~~~~aDlv~ia 75 (127)
T PF10727_consen 7 QAARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAA----F-IGA-GAILDLEEILRDADLVFIA 75 (127)
T ss_dssp -----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT------TTGGGCC-SEEEE-
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccc----c-ccc-ccccccccccccCCEEEEE
Confidence 567889999998 9999999999999999999884 65543322111 0 001 1112234567888988887
No 415
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.77 E-value=0.016 Score=47.38 Aligned_cols=67 Identities=16% Similarity=0.023 Sum_probs=47.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
....+++|.|.| .|.||++|++.|..-|.+|.+..|............++ ..++++.++.+|.|+.+
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQADIVSLH 98 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH-SEEEE-
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce--------eeehhhhcchhhhhhhh
Confidence 356788999997 59999999999999999999999987654311111122 22667888999999854
No 416
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=95.76 E-value=0.028 Score=46.96 Aligned_cols=73 Identities=19% Similarity=0.158 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (198)
++++++|+||+|.+|..+++.+.+.|.+|.++++++++.......++..+ .|..++ ..+.+.. +++|.|+.+.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVL 221 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECC
Confidence 46799999999999999999999999999999987654322211112211 233333 2333433 3789999873
No 417
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=95.76 E-value=0.075 Score=40.39 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=41.3
Q ss_pred eEEEEcCCChHHHHHHHHHHH-CCCcEEEEEe-CCcccc--cccCCceE-EEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIV-KRTRIKALVK-DKRNAM--ESFGTYVE-SMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR-~~~~a~--~~~g~~ve-vV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++.|+|++|.+|..+++.|.. .++++.+++. +.+... ....+.+. ++..++. ...+. ..++|.||.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~DvV~~~ 72 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE-PEDFE--ELAVDIVFLA 72 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc-cCChh--hcCCCEEEEc
Confidence 478999999999999999988 4889999843 322211 11122221 2222222 22333 3589999987
No 418
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.73 E-value=0.011 Score=51.40 Aligned_cols=61 Identities=10% Similarity=-0.014 Sum_probs=44.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|.|.| .|.+|+.+++.|++.|++|++..|++++.......+.. ...+..++++.+|.||.+
T Consensus 2 IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~ 62 (291)
T TIGR01505 2 VGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTM 62 (291)
T ss_pred EEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEe
Confidence 67776 69999999999999999999999988665432222221 112456778889999876
No 419
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.73 E-value=0.018 Score=50.12 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=45.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|.+.|++|.+..|++++.......++.+ ..++.++++.+|.||.+
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIITM 65 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEe
Confidence 4688997 699999999999999999999988876543322222221 12345667889999876
No 420
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=95.72 E-value=0.11 Score=44.56 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHH---HHHHhh-cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKK---FLKTAL-RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~---sL~~AL-~GvDaVIh~ 170 (198)
+..+|||+|++|.+|..++..+...|.+|.++++++++.... ++. .+++.. .+.+ .+.+.. .++|.+|.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~~~--~~~~~~~~v~~~~~~~~d~vi~~ 221 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAINY--KTPDLAEALKEAAPDGIDVYFDN 221 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEEec--CChhHHHHHHHhccCCceEEEEc
Confidence 457899999999999999999999999999998877543322 331 223322 2222 223222 478999987
Q ss_pred ChhH----HHHHHHhCCCCeEEEEcc
Q 029118 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G~----lldAA~~~GVkRiV~vSS 192 (198)
..+. .++.++.. .++|.++.
T Consensus 222 ~g~~~~~~~~~~l~~~--G~~v~~g~ 245 (329)
T cd05288 222 VGGEILDAALTLLNKG--GRIALCGA 245 (329)
T ss_pred chHHHHHHHHHhcCCC--ceEEEEee
Confidence 3222 23333333 36776654
No 421
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.72 E-value=0.039 Score=47.24 Aligned_cols=64 Identities=9% Similarity=0.052 Sum_probs=45.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC---CcEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G---~~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|+ |.+|+.+++.|...| ++|.+..|++++....... ++++. . +..++++.+|.||.+
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~----~---~~~~~~~~advVil~ 69 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAA----T---DNQEAAQEADVVVLA 69 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeec----C---ChHHHHhcCCEEEEE
Confidence 467999985 999999999999998 7899999987654322111 23221 1 234556789999877
No 422
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.71 E-value=0.067 Score=44.90 Aligned_cols=72 Identities=18% Similarity=0.233 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCC-HHHHHHhhc--CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASN-KKFLKTALR--GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D-~~sL~~AL~--GvDaVIh~ 170 (198)
+..+++|+|++|.+|+.++..+...|.+|.+++++..+.... ++. ..++..+..+ ...+.+... ++|.+|.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGA-AHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCC-CEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 456899999999999999999999999999998876543221 221 1222222212 222333333 68999987
No 423
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.71 E-value=0.11 Score=46.07 Aligned_cols=63 Identities=13% Similarity=0.220 Sum_probs=45.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccccc----------cCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~~----------~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
++|.|.|+ |.+|+.++..|+.+| ++|.++.|+++++... .+..+.+..+ + .+.++++|.|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~----~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---D----YSDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---C----HHHhCCCCEE
Confidence 37999996 999999999999999 6899999988764311 0122333322 2 2357999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
|.+
T Consensus 73 Iit 75 (306)
T cd05291 73 VIT 75 (306)
T ss_pred EEc
Confidence 987
No 424
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=95.69 E-value=0.092 Score=44.01 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a~ 172 (198)
+..+++|+|++|.+|..++..+...|.+|.++.++++........++..+ .+..++ ..+.+.. +++|.+|.+..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 217 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIA-INYREEDFVEVVKAETGGKGVDVILDIVG 217 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEE-EecCchhHHHHHHHHcCCCCeEEEEECCc
Confidence 46799999999999999999999999999999887654321111112211 122222 2233333 36899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEcc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS 192 (198)
+. .++..... .++|.++.
T Consensus 218 ~~~~~~~~~~l~~~--g~~v~~g~ 239 (325)
T TIGR02824 218 GSYLNRNIKALALD--GRIVQIGF 239 (325)
T ss_pred hHHHHHHHHhhccC--cEEEEEec
Confidence 22 23333333 47776653
No 425
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=95.63 E-value=0.093 Score=46.24 Aligned_cols=90 Identities=11% Similarity=0.028 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCC--HHHHHHhhcCccEEEEcC--h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPS--E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D--~~sL~~AL~GvDaVIh~a--~ 172 (198)
+.++|||+|+ |-+|...+..+...|. +|.++.+++++.......+++.+ .|..+ ...+.+...++|.||-+. .
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~~g~~D~vid~~G~~ 246 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL-VNPQNDDLDHYKAEKGYFDVSFEVSGHP 246 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE-ecCCcccHHHHhccCCCCCEEEECCCCH
Confidence 5779999986 9999999988888898 58888888765432221223322 13332 222222223489999873 2
Q ss_pred hH---HHHHHHhCCCCeEEEEc
Q 029118 173 GF---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vS 191 (198)
.+ .+++.+.. .++|.++
T Consensus 247 ~~~~~~~~~l~~~--G~iv~~G 266 (343)
T PRK09880 247 SSINTCLEVTRAK--GVMVQVG 266 (343)
T ss_pred HHHHHHHHHhhcC--CEEEEEc
Confidence 22 34444443 4677665
No 426
>PLN00203 glutamyl-tRNA reductase
Probab=95.61 E-value=0.029 Score=54.15 Aligned_cols=70 Identities=13% Similarity=0.180 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++..... +++.+. +...+.+.+++.++|.||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEc
Confidence 55778999999 9999999999999996 69999998877543321 122222 22334567889999999987
No 427
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.60 E-value=0.048 Score=50.50 Aligned_cols=91 Identities=12% Similarity=0.100 Sum_probs=52.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCc--ccccccCCceE-E--EEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAMESFGTYVE-S--MAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~--~a~~~~g~~ve-v--V~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
+.+|.|.||||++|..+++.|..+ ..++.....+.. +......++.. . .....-|++.+ ..++||+||.+ .
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalP 79 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALP 79 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEecC
Confidence 578999999999999999988765 345555543221 11111112211 1 22222333333 56789999987 4
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
.|. ++....+.|++ ||=+|.
T Consensus 80 hg~s~~~v~~l~~~g~~-VIDLSa 102 (349)
T COG0002 80 HGVSAELVPELLEAGCK-VIDLSA 102 (349)
T ss_pred chhHHHHHHHHHhCCCe-EEECCc
Confidence 443 45555566766 666663
No 428
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=95.57 E-value=0.07 Score=45.97 Aligned_cols=91 Identities=11% Similarity=0.093 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh-H
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG-F 174 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G-~ 174 (198)
.+..+|||+|+ |.+|+.+++.+...|++|.+++++.++.......+.+.+..+ .+.......-.++|.||.+ ..+ .
T Consensus 161 ~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~d~vi~~~~~~~~ 238 (330)
T cd08245 161 RPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDS-GAELDEQAAAGGADVILVTVVSGAA 238 (330)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEecc-CCcchHHhccCCCCEEEECCCcHHH
Confidence 34568999976 559999999999999999999987765322211112222211 1222222223578999987 222 2
Q ss_pred ---HHHHHHhCCCCeEEEEc
Q 029118 175 ---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vS 191 (198)
.++..+..| ++|.++
T Consensus 239 ~~~~~~~l~~~G--~~i~~~ 256 (330)
T cd08245 239 AEAALGGLRRGG--RIVLVG 256 (330)
T ss_pred HHHHHHhcccCC--EEEEEC
Confidence 334434444 677665
No 429
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.56 E-value=0.038 Score=50.01 Aligned_cols=64 Identities=13% Similarity=0.005 Sum_probs=44.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcc--cc----ccc------CCceEEEEccCCCHHHHHHh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ESF------GTYVESMAGDASNKKFLKTA 160 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~--a~----~~~------g~~vevV~GDl~D~~sL~~A 160 (198)
.+|.|+||+|++|.+++..|+.+|. ++..+..+... +. ... ..++++.. ...++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~-------~~~~~ 75 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD-------DPNVA 75 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec-------CcHHH
Confidence 4899999999999999999988875 68888774322 21 110 01222221 22578
Q ss_pred hcCccEEEEc
Q 029118 161 LRGVRSIICP 170 (198)
Q Consensus 161 L~GvDaVIh~ 170 (198)
++++|.||.+
T Consensus 76 ~~daDivvit 85 (322)
T cd01338 76 FKDADWALLV 85 (322)
T ss_pred hCCCCEEEEe
Confidence 9999999987
No 430
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=95.56 E-value=0.095 Score=46.47 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccccc--ccCCceEEEEccCCCH---HHHHHhhc--CccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~--~~g~~vevV~GDl~D~---~sL~~AL~--GvDaVI 168 (198)
.++++|||+|+ |-+|..++..+...|.+ |.++.+++++... .++. -+++ |..+. +.+.+... |+|.||
T Consensus 175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga-~~~i--~~~~~~~~~~i~~~~~~~g~d~vi 250 (358)
T TIGR03451 175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGA-THTV--NSSGTDPVEAIRALTGGFGADVVI 250 (358)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-ceEE--cCCCcCHHHHHHHHhCCCCCCEEE
Confidence 35779999985 99999999988889985 8888887765422 2332 1223 23322 33444443 689999
Q ss_pred EcC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 169 CPS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. ..+ .+++++.. .++|.+..
T Consensus 251 d~~g~~~~~~~~~~~~~~~--G~iv~~G~ 277 (358)
T TIGR03451 251 DAVGRPETYKQAFYARDLA--GTVVLVGV 277 (358)
T ss_pred ECCCCHHHHHHHHHHhccC--CEEEEECC
Confidence 873 222 33333433 47777654
No 431
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=95.55 E-value=0.031 Score=45.69 Aligned_cols=93 Identities=11% Similarity=0.055 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh----hcCccEEEEcCh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICPSE 172 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A----L~GvDaVIh~a~ 172 (198)
.++.+|||+|+++ +|+.+++.+...|.+|.++++++++.......+... ..|..+....... -.++|.||.+..
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 210 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG 210 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence 4567899999999 999999999999999999998765432211111111 1233333332221 257899998732
Q ss_pred h-H----HHHHHHhCCCCeEEEEccc
Q 029118 173 G-F----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G-~----lldAA~~~GVkRiV~vSS~ 193 (198)
+ . .++.++.. .++|.++..
T Consensus 211 ~~~~~~~~~~~l~~~--G~~v~~~~~ 234 (271)
T cd05188 211 GPETLAQALRLLRPG--GRIVVVGGT 234 (271)
T ss_pred CHHHHHHHHHhcccC--CEEEEEccC
Confidence 2 2 33444333 467766643
No 432
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=95.55 E-value=0.087 Score=49.51 Aligned_cols=85 Identities=15% Similarity=0.183 Sum_probs=55.7
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc--Ch
Q 029118 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--SE 172 (198)
Q Consensus 98 ~~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~--a~ 172 (198)
..++|+|.||| |.+|+.+++.|++.|++=.+..-||... +..+ +. -..+++++-..+|.++.+ ..
T Consensus 6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~-~i~G--~~-------~~~sl~~lp~~~Dlavi~vp~~ 75 (447)
T TIGR02717 6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAG-EILG--VK-------AYPSVLEIPDPVDLAVIVVPAK 75 (447)
T ss_pred CCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCC-ccCC--cc-------ccCCHHHCCCCCCEEEEecCHH
Confidence 35679999998 7799999999999998433333355432 2223 11 112344444567888765 22
Q ss_pred --hHHHHHHHhCCCCeEEEEcc
Q 029118 173 --GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 --G~lldAA~~~GVkRiV~vSS 192 (198)
..+++.|.+.|++.+|.+|+
T Consensus 76 ~~~~~l~e~~~~gv~~~vi~s~ 97 (447)
T TIGR02717 76 YVPQVVEECGEKGVKGAVVITA 97 (447)
T ss_pred HHHHHHHHHHhcCCCEEEEECC
Confidence 22677778889999988876
No 433
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.55 E-value=0.017 Score=54.08 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=53.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.+..+++|||.|+ |.+|+.+++.|...|. ++.+..|+.+++...... +. .+.+...+.+.+++..+|.||++
T Consensus 176 ~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 176 LDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred hcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEEC
Confidence 34566789999998 9999999999999995 688888987765433211 10 01233345778889999999998
No 434
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=95.52 E-value=0.051 Score=50.72 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
+++|.|.| .|.+|++++.....-|++|+++.-+++....... -.++..+++|++.+++..+.||+|
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va--~~~i~~~~dD~~al~ela~~~DVi 66 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA--DRVIVAAYDDPEALRELAAKCDVI 66 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc--cceeecCCCCHHHHHHHHhhCCEE
Confidence 36788887 5999999999999999999999755544322222 367888999999999999999998
No 435
>PLN02688 pyrroline-5-carboxylate reductase
Probab=95.52 E-value=0.026 Score=48.29 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=44.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC----cEEEE-EeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT----RIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~----~Vral-vR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.+.| .|.+|..+++.|+++|+ +|.+. .|++++.......++++. . +..++++.+|.||.+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~----~---~~~e~~~~aDvVil~ 68 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA----A---SNTEVVKSSDVIILA 68 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe----C---ChHHHHhcCCEEEEE
Confidence 4688887 99999999999999998 88888 777665433222234331 1 234567788999877
No 436
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.47 E-value=0.038 Score=48.66 Aligned_cols=65 Identities=9% Similarity=-0.005 Sum_probs=44.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|.| .|.+|+.+++.|+++|++|.+..|++++.......++++ ..+++.+.+.+.++|.||.+
T Consensus 2 ~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~ 66 (301)
T PRK09599 2 QLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM 66 (301)
T ss_pred EEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence 677886 899999999999999999999999876654322222332 23444444444456777655
No 437
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.47 E-value=0.04 Score=48.89 Aligned_cols=71 Identities=14% Similarity=0.071 Sum_probs=46.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEc-----cCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAG-----DASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~G-----Dl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.| .|.+|..++..|..+||+|++..|+++...... +.+...+.+ .+.-.+++.++++.+|.||.+
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 46799996 599999999999999999999999875432111 000000001 011122455678899999987
No 438
>PLN02740 Alcohol dehydrogenase-like
Probab=95.44 E-value=0.13 Score=46.18 Aligned_cols=94 Identities=12% Similarity=0.074 Sum_probs=55.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCH-----HHHHHhhc-CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~-----~sL~~AL~-GvDaVIh 169 (198)
.+.++|||+|+ |-+|..++..+...|. +|.++.+++++.......+++.+. |..++ +.+.+... |+|.||.
T Consensus 197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i-~~~~~~~~~~~~v~~~~~~g~dvvid 274 (381)
T PLN02740 197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI-NPKDSDKPVHERIREMTGGGVDYSFE 274 (381)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEE-ecccccchHHHHHHHHhCCCCCEEEE
Confidence 34678999996 9999999998888998 599888877654322111232221 33321 23443333 6999998
Q ss_pred cC--hhHHHHHHH--hCCCCeEEEEcc
Q 029118 170 PS--EGFISNAGS--LKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a--~G~lldAA~--~~GVkRiV~vSS 192 (198)
+. ..++-++.. ..|-.++|.++.
T Consensus 275 ~~G~~~~~~~a~~~~~~g~G~~v~~G~ 301 (381)
T PLN02740 275 CAGNVEVLREAFLSTHDGWGLTVLLGI 301 (381)
T ss_pred CCCChHHHHHHHHhhhcCCCEEEEEcc
Confidence 73 223322222 222356777664
No 439
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.40 E-value=0.16 Score=46.43 Aligned_cols=95 Identities=12% Similarity=0.128 Sum_probs=62.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCC-------------------cccc------cccCCceE--EE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYVE--SM 147 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~-------------------~~a~------~~~g~~ve--vV 147 (198)
.....+|+|.|+ |-+|++++..|...|. +++++.++. .++. ....+.++ .+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 456778999976 6799999999999997 577777651 1111 11224444 44
Q ss_pred EccCCCHHHHHHhhcCccEEEEcCh-----hHHHHHHHhCCCCeEEEEccc
Q 029118 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----G~lldAA~~~GVkRiV~vSS~ 193 (198)
...++ .+.+.+.++++|.||.+.. -.+-++|++.++ .+|+.+..
T Consensus 211 ~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~i-p~i~~~~~ 259 (376)
T PRK08762 211 QERVT-SDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGK-PLVYGAVF 259 (376)
T ss_pred eccCC-hHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEec
Confidence 44443 4567778899999998831 126677888885 45665543
No 440
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.37 E-value=0.1 Score=48.11 Aligned_cols=81 Identities=14% Similarity=0.057 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-cccc---CCceEEEEccCCCHHHHHHhhcCccEEEEc-C--
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESF---GTYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (198)
.++|+|+|+ |.+|..+++.|.++|++|.+..+++... ...+ ..++++..+...+ ..+.++|.||.. .
T Consensus 5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPGIS 78 (445)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCCCC
Confidence 568999998 4799999999999999999998655431 1111 1357777665432 134688999976 2
Q ss_pred hh-HHHHHHHhCCCC
Q 029118 172 EG-FISNAGSLKGVQ 185 (198)
Q Consensus 172 ~G-~lldAA~~~GVk 185 (198)
.. -.+.+|+++|++
T Consensus 79 ~~~p~~~~a~~~~i~ 93 (445)
T PRK04308 79 ERQPDIEAFKQNGGR 93 (445)
T ss_pred CCCHHHHHHHHcCCc
Confidence 11 245555555543
No 441
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=95.36 E-value=0.071 Score=48.37 Aligned_cols=65 Identities=15% Similarity=0.045 Sum_probs=44.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCc--ccc----ccc------CCceEEEEccCCCHHHHHH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESF------GTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~--~a~----~~~------g~~vevV~GDl~D~~sL~~ 159 (198)
..+|.|+||+|++|++++..|+.++. ++..+.+++. ++. ... ..++.+. ....+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-------TDPEE 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-------cChHH
Confidence 45899999999999999999988874 7888877542 121 000 0112221 12357
Q ss_pred hhcCccEEEEc
Q 029118 160 ALRGVRSIICP 170 (198)
Q Consensus 160 AL~GvDaVIh~ 170 (198)
+++++|.||.+
T Consensus 76 ~~~daDvVVit 86 (323)
T TIGR01759 76 AFKDVDAALLV 86 (323)
T ss_pred HhCCCCEEEEe
Confidence 89999999987
No 442
>PRK07877 hypothetical protein; Provisional
Probab=95.36 E-value=0.062 Score=53.88 Aligned_cols=94 Identities=15% Similarity=0.226 Sum_probs=65.2
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCc---ccc---------------------cccCCc--eE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKR---NAM---------------------ESFGTY--VE 145 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~---~a~---------------------~~~g~~--ve 145 (198)
-+...+.+|+|.|+ | +|++++..|...|. +++.+..+.- +.. ...+++ |+
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 45677889999999 8 99999999999995 7777765421 100 011233 55
Q ss_pred EEEccCCCHHHHHHhhcCccEEEEcCh--hH---HHHHHHhCCCCeEEEEc
Q 029118 146 SMAGDASNKKFLKTALRGVRSIICPSE--GF---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 146 vV~GDl~D~~sL~~AL~GvDaVIh~a~--G~---lldAA~~~GVkRiV~vS 191 (198)
.+...++ ++.+.+.+.++|.||.+.+ .+ +-++|.++++. +|+-+
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~ 228 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMAT 228 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEc
Confidence 5666665 7888999999999998832 22 66788888765 44444
No 443
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=95.31 E-value=0.077 Score=44.71 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC-HHHHHHhhcCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D-~~sL~~AL~GvDaVIh~a 171 (198)
++.+|||.||+|.+|+.++..+...|.+|.++++++++.......+++.+..+-.+ ...+.+.=+++|.|+.+.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~ 216 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELV 216 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECC
Confidence 46799999999999999999999999999999887755432211223333222111 222332224789999873
No 444
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.30 E-value=0.077 Score=46.38 Aligned_cols=35 Identities=9% Similarity=0.108 Sum_probs=31.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
++|.|.|+ |.+|..++..|..+|++|++..++++.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 57999985 999999999999999999999988754
No 445
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=95.25 E-value=0.029 Score=49.50 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=45.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|..+++.|+.+||+|.+..|++++.......++. ...+..++++++|.||.+
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEe
Confidence 3677775 89999999999999999999999988765433221221 122345677888888866
No 446
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.21 E-value=0.072 Score=47.97 Aligned_cols=64 Identities=16% Similarity=0.136 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|.|.| .|.||+.+++.|...|++|.+..|.++... +++.+ ....++.++++.+|.|+++
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEEC
Confidence 4567888886 899999999999999999999987554321 12222 1345789999999999865
No 447
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.20 E-value=0.037 Score=50.06 Aligned_cols=69 Identities=20% Similarity=0.146 Sum_probs=44.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccc--ccccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA--MESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a--~~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|+||+|++|++++-.|..++. ++..+..+.... ..+.. ....+.... ..+++.++++++|.||.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEe
Confidence 4799999999999999999888884 677777661111 11111 112222110 112356789999999987
No 448
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.20 E-value=0.045 Score=47.55 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=33.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
..++++|+|+ |.+|+.++..|...|++|.+..|+++++
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~ 153 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA 153 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999998 8999999999999999999999987654
No 449
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.18 E-value=0.11 Score=48.36 Aligned_cols=66 Identities=9% Similarity=-0.025 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-c----ccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a----~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+++|+|.|+ |.+|..+++.|.++|++|.++.+++.. . ......++++..++-.. ...++|.||..
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s 85 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS 85 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence 4568999996 889999999999999999999765421 1 11222457887765332 34578988875
No 450
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=95.17 E-value=0.064 Score=45.90 Aligned_cols=71 Identities=14% Similarity=0.071 Sum_probs=47.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC--HHHHHHhh-cCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D--~~sL~~AL-~GvDaVIh~ 170 (198)
..+|||+|++|.+|..++..+.+.|.+|.++++++++.......+++.+ .|..+ ...+.+.. .++|.||.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~ 220 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEV-IPREELQEESIKPLEKQRWAGAVDP 220 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEE-EcchhHHHHHHHhhccCCcCEEEEC
Confidence 4699999999999999999999999999999988765432211223222 11222 23333332 468999977
No 451
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=95.17 E-value=0.17 Score=45.24 Aligned_cols=91 Identities=10% Similarity=0.043 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhhc-CccEEEEcC-
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR-GVRSIICPS- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL~-GvDaVIh~a- 171 (198)
+.++|||+|+ |-+|..++..+...|. +|.++.+++++......-+++.+ .|..+. +.+.+... ++|.||.+.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~-i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT-VNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceE-eCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 4678999985 9999999988888998 58888887765432111122221 223332 33443333 689999873
Q ss_pred -hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 -EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~---lldAA~~~GVkRiV~vSS 192 (198)
... .+++++..| ++|.++.
T Consensus 269 ~~~~~~~~~~~l~~~G--~iv~~G~ 291 (371)
T cd08281 269 SVPALETAYEITRRGG--TTVTAGL 291 (371)
T ss_pred ChHHHHHHHHHHhcCC--EEEEEcc
Confidence 222 344444444 6776654
No 452
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.16 E-value=0.054 Score=49.93 Aligned_cols=69 Identities=12% Similarity=-0.012 Sum_probs=50.5
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.+....++|.|.|- |.+|+.+++.|...|++|++..|...........++++ .++.++++.+|.|+.+
T Consensus 10 ~~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~ll 78 (335)
T PRK13403 10 NVELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQML 78 (335)
T ss_pred ChhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEe
Confidence 456777889999985 99999999999999999999887533221111122332 1578899999999865
No 453
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.16 E-value=0.027 Score=49.68 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=33.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
..+|.|.|+ |.+|..++..|+.+|++|++..++++..
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 357999987 9999999999999999999999988754
No 454
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.15 E-value=0.039 Score=51.01 Aligned_cols=72 Identities=10% Similarity=0.141 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|++.+.|+|+.| +|..-++...+-|++|.++.+..++..+.+ ..+.+++..-..|++.++++..-.|.++|+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~ 253 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDT 253 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCccee
Confidence 678899999999 998888888889999999999864433332 245787777777999888888766666655
No 455
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.15 E-value=0.064 Score=51.52 Aligned_cols=66 Identities=15% Similarity=0.081 Sum_probs=49.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...+++++|.| -|.||+.+++.|...|.+|.+..+++.+.......+++++ .+.++++.+|.||.+
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEEC
Confidence 45788999999 5689999999999999999999888765422212234432 356788999999876
No 456
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=95.13 E-value=0.063 Score=49.38 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-CceEEEEccCCC---HHHHHHhh-cCccEEEEcChh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASN---KKFLKTAL-RGVRSIICPSEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-~~vevV~GDl~D---~~sL~~AL-~GvDaVIh~a~G 173 (198)
+.+|+|++|+|-+|+.+......+|.+|+.++=.+++...... .++. ...|..+ .+.|.+|+ +|+|..|-+.-|
T Consensus 151 GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg 229 (340)
T COG2130 151 GETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFENVGG 229 (340)
T ss_pred CCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEcCCc
Confidence 6699999999999988777667789999999977776432211 1111 1123333 23445554 789999977555
Q ss_pred HHHHHHHh--CCCCeEEEEccccee
Q 029118 174 FISNAGSL--KGVQHVILLSQGAVV 196 (198)
Q Consensus 174 ~lldAA~~--~GVkRiV~vSS~~Vy 196 (198)
.++||+.. +--.||+....++-|
T Consensus 230 ~v~DAv~~~ln~~aRi~~CG~IS~Y 254 (340)
T COG2130 230 EVLDAVLPLLNLFARIPVCGAISQY 254 (340)
T ss_pred hHHHHHHHhhccccceeeeeehhhc
Confidence 56666532 233566665554444
No 457
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=95.12 E-value=0.23 Score=42.75 Aligned_cols=91 Identities=10% Similarity=0.055 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCC-HHHHHHhhc--CccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D-~~sL~~AL~--GvDaVIh~a~ 172 (198)
+..+++|.||+|.+|+.++..+...|.+|.++++++++.... ++. .+++..+-.+ .+.+.++.. ++|.|+.+..
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~ 218 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGA-WQVINYREENIVERVKEITGGKKVRVVYDSVG 218 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC-CEEEcCCCCcHHHHHHHHcCCCCeEEEEECCc
Confidence 467999999999999999999999999999998776543221 232 2333322222 233445444 6898887732
Q ss_pred hH----HHHHHHhCCCCeEEEEc
Q 029118 173 GF----ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vS 191 (198)
+. .++..... .|+|.++
T Consensus 219 ~~~~~~~~~~l~~~--g~~v~~g 239 (327)
T PRK10754 219 KDTWEASLDCLQRR--GLMVSFG 239 (327)
T ss_pred HHHHHHHHHHhccC--CEEEEEc
Confidence 22 23333333 3677664
No 458
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=95.10 E-value=0.095 Score=44.71 Aligned_cols=72 Identities=8% Similarity=0.142 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC---HHHHHHhhc--CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D---~~sL~~AL~--GvDaVIh~ 170 (198)
+..+|||.||+|-+|+.++..+.+.|.+|.+.+++.++.......+++.+. +..+ ...+.+... |+|.||.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~ 215 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV-STEQPGWQDKVREAAGGAPISVALDS 215 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE-cCCCchHHHHHHHHhCCCCCcEEEEC
Confidence 467899999999999999999999999999998876543222111232221 2222 233444443 69999987
No 459
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.10 E-value=0.12 Score=48.85 Aligned_cols=84 Identities=14% Similarity=0.099 Sum_probs=55.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C---
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (198)
-.++++|+|.| .|.+|..+++.|..+|++|.+..+++.........+++++.++.. .+.++++|.||.. .
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~-----~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDA-----VQQIADYALVVTSPGFRP 82 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcch-----HhHhhcCCEEEECCCCCC
Confidence 34567899999 778999999999999999999886544322222234666654431 2345678988875 2
Q ss_pred hhHHHHHHHhCCCC
Q 029118 172 EGFISNAGSLKGVQ 185 (198)
Q Consensus 172 ~G~lldAA~~~GVk 185 (198)
..-.+.+|++.|++
T Consensus 83 ~~p~~~~a~~~gi~ 96 (488)
T PRK03369 83 TAPVLAAAAAAGVP 96 (488)
T ss_pred CCHHHHHHHHCCCc
Confidence 12256666666644
No 460
>PRK05442 malate dehydrogenase; Provisional
Probab=95.10 E-value=0.068 Score=48.57 Aligned_cols=66 Identities=15% Similarity=0.035 Sum_probs=43.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcc--cc----cc------cCCceEEEEccCCCHHHHH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ES------FGTYVESMAGDASNKKFLK 158 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~--a~----~~------~g~~vevV~GDl~D~~sL~ 158 (198)
+..+|.|+||+|++|.+++-.|+..+. ++..+++++.. +. .. +..++.+.. ...
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-------~~y 75 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD-------DPN 75 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec-------ChH
Confidence 345899999999999999998887664 67777764421 11 00 011222221 225
Q ss_pred HhhcCccEEEEc
Q 029118 159 TALRGVRSIICP 170 (198)
Q Consensus 159 ~AL~GvDaVIh~ 170 (198)
++++++|.||.+
T Consensus 76 ~~~~daDiVVit 87 (326)
T PRK05442 76 VAFKDADVALLV 87 (326)
T ss_pred HHhCCCCEEEEe
Confidence 789999999987
No 461
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=95.08 E-value=0.2 Score=44.57 Aligned_cols=92 Identities=15% Similarity=0.127 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc--cCCceEEEEccCCC--H---HHHHHhhc-CccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES--FGTYVESMAGDASN--K---KFLKTALR-GVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~--~g~~vevV~GDl~D--~---~sL~~AL~-GvDaV 167 (198)
.++.+|||.|+ |.+|..++..+...|. +|.++++++++.... ++. .+++ |..+ . ..+.+... ++|.|
T Consensus 186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga-~~~i--~~~~~~~~~~~~v~~~~~~~~d~v 261 (369)
T cd08301 186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGV-TEFV--NPKDHDKPVQEVIAEMTGGGVDYS 261 (369)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-ceEE--cccccchhHHHHHHHHhCCCCCEE
Confidence 35779999985 9999999998888998 799998887654322 332 1222 2222 1 22333332 68999
Q ss_pred EEcC-hh-H---HHHHHHhCCCCeEEEEccc
Q 029118 168 ICPS-EG-F---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 168 Ih~a-~G-~---lldAA~~~GVkRiV~vSS~ 193 (198)
|.+. .. . .+++++. +-.++|.++..
T Consensus 262 id~~G~~~~~~~~~~~~~~-~~g~~v~~g~~ 291 (369)
T cd08301 262 FECTGNIDAMISAFECVHD-GWGVTVLLGVP 291 (369)
T ss_pred EECCCChHHHHHHHHHhhc-CCCEEEEECcC
Confidence 9873 22 2 2333332 22578777653
No 462
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=95.08 E-value=0.11 Score=47.27 Aligned_cols=92 Identities=12% Similarity=0.058 Sum_probs=54.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeC-Ccccc---cccCC--------ceEEEE-ccCCCHHHHHHhhcCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKD-KRNAM---ESFGT--------YVESMA-GDASNKKFLKTALRGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~-~~~a~---~~~g~--------~vevV~-GDl~D~~sL~~AL~Gv 164 (198)
+.+|.|.|+ |.||+.+++.+.++ +.+|.++... ++... ...+- ..+.+. .++.=...+.+.+.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 357999999 99999999988754 6788888742 21111 00110 000000 0010011234556789
Q ss_pred cEEEEcC-hh---HHHHHHHhCCCCeEEEEcc
Q 029118 165 RSIICPS-EG---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 165 DaVIh~a-~G---~lldAA~~~GVkRiV~vSS 192 (198)
|.||.+. .. ..++.+.++| +++|+.++
T Consensus 80 DVVIdaT~~~~~~e~a~~~~~aG-k~VI~~~~ 110 (341)
T PRK04207 80 DIVVDATPGGVGAKNKELYEKAG-VKAIFQGG 110 (341)
T ss_pred CEEEECCCchhhHHHHHHHHHCC-CEEEEcCC
Confidence 9999873 11 2677788889 77887766
No 463
>PLN02928 oxidoreductase family protein
Probab=95.07 E-value=0.065 Score=48.88 Aligned_cols=74 Identities=9% Similarity=0.035 Sum_probs=50.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-c---CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-F---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++++.|.|- |.||+.+++.|...|.+|.+..|+..+.... + ...++.+........++.++++.+|.|+.+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 466789999986 9999999999999999999998764321110 0 011111111112456889999999999865
No 464
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=95.07 E-value=0.22 Score=44.65 Aligned_cols=87 Identities=15% Similarity=0.051 Sum_probs=49.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEE-EeCCcccc-----cccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKAL-VKDKRNAM-----ESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~Vral-vR~~~~a~-----~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|+|.||+|..|+.+++.+.+.. +++.+. .|++.... +..+ ..+.+.. .| .+..+...+|.+|-.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v---~~--~~~~~~~~~DV~IDF 76 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPV---TD--DLLLVKADADVLIDF 76 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCcee---ec--chhhcccCCCEEEEC
Confidence 5789999999999999999887764 565554 45543221 1111 0111111 11 144455666777754
Q ss_pred --ChhH--HHHHHHhCCCCeEEEE
Q 029118 171 --SEGF--ISNAGSLKGVQHVILL 190 (198)
Q Consensus 171 --a~G~--lldAA~~~GVkRiV~v 190 (198)
..++ .++.|.+++++.+|=+
T Consensus 77 T~P~~~~~~l~~~~~~~~~lVIGT 100 (266)
T COG0289 77 TTPEATLENLEFALEHGKPLVIGT 100 (266)
T ss_pred CCchhhHHHHHHHHHcCCCeEEEC
Confidence 2222 5666666665555533
No 465
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=95.06 E-value=0.29 Score=41.59 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce-EEEEccC-CCHHHHHHhh--cCccEEEEcC-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDA-SNKKFLKTAL--RGVRSIICPS- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v-evV~GDl-~D~~sL~~AL--~GvDaVIh~a- 171 (198)
.+..++||.|++|.+|+.++..+.+.|.+|.+++++.++.......++ +++..+- .....+.+.. +++|.|+.+.
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 356799999999999999999999999999999887654322111112 2222211 1122334343 4789999872
Q ss_pred -hhH--HHHHHHhCCCCeEEEEcc
Q 029118 172 -EGF--ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~--lldAA~~~GVkRiV~vSS 192 (198)
... .++..+.. .++|.++.
T Consensus 217 ~~~~~~~~~~l~~~--g~~v~~g~ 238 (323)
T cd05282 217 GESATRLARSLRPG--GTLVNYGL 238 (323)
T ss_pred CHHHHHHHHhhCCC--CEEEEEcc
Confidence 111 33333332 46776653
No 466
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.05 E-value=0.34 Score=40.66 Aligned_cols=98 Identities=10% Similarity=0.106 Sum_probs=62.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcc---c----------------------ccccCCc--eEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---A----------------------MESFGTY--VES 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~---a----------------------~~~~g~~--vev 146 (198)
+.....+|+|.|+.| +|.++++.|...|.. ++.+..+.-. . .....+. ++.
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~ 95 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV 95 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence 355677899999877 999999999999975 6666533210 0 0112233 344
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcC--hhH---HHHHHHhCCCCeEEEEccccee
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPS--EGF---ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a--~G~---lldAA~~~GVkRiV~vSS~~Vy 196 (198)
....+.+ ...+-++++|.||.+. ... +-++|++.++ .+|+.++.+-|
T Consensus 96 ~~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~i-p~i~~~~~G~~ 147 (197)
T cd01492 96 DTDDISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGV-KFYATGVHGLF 147 (197)
T ss_pred EecCccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEecCCE
Confidence 4444442 2344578999999872 222 6678899997 46666665544
No 467
>PRK06444 prephenate dehydrogenase; Provisional
Probab=95.05 E-value=0.078 Score=45.06 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=26.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK 127 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~Vr 127 (198)
++|.|.||+|.+|+.+++.+.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 4799999999999999999999999985
No 468
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.01 E-value=0.053 Score=47.74 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=45.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.| .|.+|..+++.|...|+ +|.+..|+++........++... . .....++++++|.||.+
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~~~~~~~aDvViia 73 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDR---V--TTSAAEAVKGADLVILC 73 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCce---e--cCCHHHHhcCCCEEEEC
Confidence 46799998 99999999999999885 78888887754332211111100 1 11345677899999987
No 469
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=95.01 E-value=0.18 Score=43.19 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=46.4
Q ss_pred CCCC-eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce-EEEEccCCCHH-HHHHhh-cCccEEEEc
Q 029118 97 EARD-AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKK-FLKTAL-RGVRSIICP 170 (198)
Q Consensus 97 ~~~~-~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v-evV~GDl~D~~-sL~~AL-~GvDaVIh~ 170 (198)
.+.. +|||.|++|.+|..+++.+...|.+|.++++++++.......++ +++. ..+.. .+.... .++|.++.+
T Consensus 143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~d~vld~ 218 (323)
T TIGR02823 143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVID--REDLSPPGKPLEKERWAGAVDT 218 (323)
T ss_pred CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEc--cccHHHHHHHhcCCCceEEEEC
Confidence 3456 99999999999999999999999999988877654322111112 2222 22322 232222 257888887
No 470
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.00 E-value=0.22 Score=42.37 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=62.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCC---cccc----------------------cccCCc--eEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAM----------------------ESFGTY--VES 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~---~~a~----------------------~~~g~~--vev 146 (198)
....+.+|+|.| .|-+|+++++.|...|.. +++++.+. +... ....+. ++.
T Consensus 17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~ 95 (228)
T cd00757 17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA 95 (228)
T ss_pred HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 356677899999 566999999999999974 44443221 0000 011233 455
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcC--h---hHHHHHHHhCCCCeEEEEcccc
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPS--E---GFISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a--~---G~lldAA~~~GVkRiV~vSS~~ 194 (198)
+...+ +.+.+.+.+.++|.||.+. . -.+-++|.+.++ .+|+.+..+
T Consensus 96 ~~~~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~i-p~i~~g~~g 146 (228)
T cd00757 96 YNERL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGK-PLVSGAVLG 146 (228)
T ss_pred eccee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 55555 3566778889999999882 1 126777888885 556655443
No 471
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=94.91 E-value=0.048 Score=49.28 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=44.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc--cccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~--~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|+||+|+||.+++..|..++. +++.+.+++.... .+.. ....+.... +.+.+.++++|+|.||.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvit 74 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIP 74 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEe
Confidence 589999999999999999888875 6888877662111 1111 112222101 112356799999999987
No 472
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=94.83 E-value=0.24 Score=44.34 Aligned_cols=93 Identities=18% Similarity=0.098 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCC--H---HHHHHhhc-CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--K---KFLKTALR-GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D--~---~sL~~AL~-GvDaVIh~ 170 (198)
+.++|||+|+ |.+|...+..+...|. +|.++++++++.......+++.+ .|..+ . +.+.++.. |+|.||.+
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid~ 262 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC-VNPNDYDKPIQEVIVEITDGGVDYSFEC 262 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE-EcccccchhHHHHHHHHhCCCCCEEEEC
Confidence 4678999986 9999999988888898 69888887765432211122221 12322 1 23333333 79999987
Q ss_pred C--hhHHHHHHH--hCCCCeEEEEcc
Q 029118 171 S--EGFISNAGS--LKGVQHVILLSQ 192 (198)
Q Consensus 171 a--~G~lldAA~--~~GVkRiV~vSS 192 (198)
. ...+.++.. +.+-.++|.++.
T Consensus 263 ~G~~~~~~~~~~~~~~~~G~~v~~g~ 288 (368)
T TIGR02818 263 IGNVNVMRAALECCHKGWGESIIIGV 288 (368)
T ss_pred CCCHHHHHHHHHHhhcCCCeEEEEec
Confidence 3 222222222 223357777764
No 473
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=94.81 E-value=0.028 Score=45.61 Aligned_cols=74 Identities=11% Similarity=-0.058 Sum_probs=49.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEcc-------------------CCCHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD-------------------ASNKKF 156 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GD-------------------l~D~~s 156 (198)
..+..+|+||| +|.+|...++.|...|++|..+..++.............+.-+ ......
T Consensus 17 ~~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 34556788888 8999999999999999999999987654432222223333333 234567
Q ss_pred HHHhhcCccEEEEc
Q 029118 157 LKTALRGVRSIICP 170 (198)
Q Consensus 157 L~~AL~GvDaVIh~ 170 (198)
+.+.++.+|.||..
T Consensus 96 f~~~i~~~d~vI~~ 109 (168)
T PF01262_consen 96 FAEFIAPADIVIGN 109 (168)
T ss_dssp HHHHHHH-SEEEEH
T ss_pred HHHHHhhCcEEeee
Confidence 88888999999975
No 474
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.79 E-value=0.065 Score=48.51 Aligned_cols=65 Identities=17% Similarity=0.057 Sum_probs=48.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.|- |.||+.+++.|...|.+|.+..|++...... ..+++ ..++.++++.+|.|+.+
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~-~~~~~--------~~~l~ell~~aDiV~l~ 211 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEK-ELGAE--------YRPLEELLRESDFVSLH 211 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHH-HcCCE--------ecCHHHHHhhCCEEEEe
Confidence 456789999997 9999999999999999999988765432110 00111 23577889999999865
No 475
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.78 E-value=0.079 Score=48.07 Aligned_cols=38 Identities=8% Similarity=0.131 Sum_probs=34.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
+..++.|.|.|.+|.+|+.++..|+++|++|.+..|..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence 66788999999999999999999999999999996654
No 476
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=94.78 E-value=0.28 Score=43.72 Aligned_cols=92 Identities=17% Similarity=0.137 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCCH-----HHHHHhh-cCccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNK-----KFLKTAL-RGVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D~-----~sL~~AL-~GvDaV 167 (198)
.+.++|||+|+ |.+|...+..+...|. +|.++++++++... .++ ++.+ .|..+. +.+.+.. .|+|.|
T Consensus 185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lG--a~~~-i~~~~~~~~~~~~v~~~~~~g~d~v 260 (368)
T cd08300 185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFG--ATDC-VNPKDHDKPIQQVLVEMTDGGVDYT 260 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcC--CCEE-EcccccchHHHHHHHHHhCCCCcEE
Confidence 34779999975 9999999998888999 69888888765432 233 2221 233322 2222332 279999
Q ss_pred EEcC--hhHHHHHHH--hCCCCeEEEEcc
Q 029118 168 ICPS--EGFISNAGS--LKGVQHVILLSQ 192 (198)
Q Consensus 168 Ih~a--~G~lldAA~--~~GVkRiV~vSS 192 (198)
|.+. ...+.++.. +.+-.|+|.++.
T Consensus 261 id~~g~~~~~~~a~~~l~~~~G~~v~~g~ 289 (368)
T cd08300 261 FECIGNVKVMRAALEACHKGWGTSVIIGV 289 (368)
T ss_pred EECCCChHHHHHHHHhhccCCCeEEEEcc
Confidence 9873 223222222 223358887754
No 477
>PRK06223 malate dehydrogenase; Reviewed
Probab=94.77 E-value=0.05 Score=47.85 Aligned_cols=70 Identities=10% Similarity=0.129 Sum_probs=44.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccccc----CC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF----GT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~----g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|| |.+|..++..|...|. +|+++.++++.+.... .. ........+.-.... ++++++|.||.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence 578999999 9999999999888875 8999998776542110 00 000000011101122 468999999976
No 478
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=94.76 E-value=0.067 Score=50.79 Aligned_cols=71 Identities=11% Similarity=-0.004 Sum_probs=47.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC---------CceEE----EEccCCCHHHHHHhhcCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------TYVES----MAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g---------~~vev----V~GDl~D~~sL~~AL~GvD 165 (198)
-++|.|. |+|.+|+.++..|+.+|++|++..|+++....... .+..- ..+.+.=.+++.+++++||
T Consensus 4 i~kIavI-G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACI-GGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 3578888 58999999999999999999999998765422100 00000 0111111235678899999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||.+
T Consensus 83 ~Viea 87 (495)
T PRK07531 83 WIQES 87 (495)
T ss_pred EEEEc
Confidence 99977
No 479
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.75 E-value=0.19 Score=44.10 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=46.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-------CC----ceE-EEEccCCCHHHHHHhhcCccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GT----YVE-SMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-------g~----~ve-vV~GDl~D~~sL~~AL~GvDa 166 (198)
.++|.|.|+ |.+|..++..|+.+|++|+++.++++...... +. ... ...+.+.-..+..++++++|.
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl 82 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL 82 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence 357999976 99999999999999999999998775532211 10 000 000001111235567899999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||.+
T Consensus 83 Vi~a 86 (311)
T PRK06130 83 VIEA 86 (311)
T ss_pred EEEe
Confidence 9977
No 480
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=94.73 E-value=0.16 Score=43.88 Aligned_cols=69 Identities=14% Similarity=0.041 Sum_probs=43.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEE--ccC----CCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA--GDA----SNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~--GDl----~D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|.| .|.+|..++..|.++||+|.++.| ++........++.+.. ++. .-..+..++.+.+|.||.+
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vila 75 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILA 75 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEE
Confidence 4688885 599999999999999999999999 5432221111222211 110 0011223455889999877
No 481
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.73 E-value=0.31 Score=38.00 Aligned_cols=89 Identities=21% Similarity=0.207 Sum_probs=57.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcc-------------------cc------cccCCce--EEEEccCC
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM------ESFGTYV--ESMAGDAS 152 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~-------------------a~------~~~g~~v--evV~GDl~ 152 (198)
+|+|.|+ |-+|.++++.|...|. ++.++..+.-. +. ..+.+++ +.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 4899997 8999999999999998 57776543100 00 0112344 34455544
Q ss_pred CHHHHHHhhcCccEEEEcC-----hhHHHHHHHhCCCCeEEEEcc
Q 029118 153 NKKFLKTALRGVRSIICPS-----EGFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 153 D~~sL~~AL~GvDaVIh~a-----~G~lldAA~~~GVkRiV~vSS 192 (198)
+. ...+.+.+.|.||.+. .-.+.++|++.++. +|...+
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~ 122 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGG 122 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence 43 3367789999999882 12277889988854 444443
No 482
>PRK07574 formate dehydrogenase; Provisional
Probab=94.72 E-value=0.088 Score=49.04 Aligned_cols=67 Identities=7% Similarity=-0.025 Sum_probs=47.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.|. |.||+.+++.|..-|.+|.+..|...+.......+++ -..+++++++.+|.|+.+
T Consensus 189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvV~l~ 255 (385)
T PRK07574 189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLT-------YHVSFDSLVSVCDVVTIH 255 (385)
T ss_pred ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCce-------ecCCHHHHhhcCCEEEEc
Confidence 356788999985 9999999999999999999998765322111111122 123578899999999854
No 483
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=94.69 E-value=0.086 Score=49.55 Aligned_cols=65 Identities=17% Similarity=0.046 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|+|.| .|.||+.+++.|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 193 l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~--------~leeal~~aDVVIta 257 (406)
T TIGR00936 193 IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM--------TMEEAAKIGDIFITA 257 (406)
T ss_pred CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC--------CHHHHHhcCCEEEEC
Confidence 4688899998 7889999999999999999999888866433222234332 124577889999876
No 484
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.66 E-value=0.082 Score=47.89 Aligned_cols=63 Identities=14% Similarity=0.107 Sum_probs=47.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...+++|.|.| .|.||+.+++.|...|++|.+..|++..... .++ -..++.++++.+|.|+.+
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~----~~~-------~~~~l~ell~~aDiVil~ 205 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD----FLT-------YKDSVKEAIKDADIISLH 205 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh----hhh-------ccCCHHHHHhcCCEEEEe
Confidence 35677899997 5999999999999999999999887643211 111 123578899999999865
No 485
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.66 E-value=0.13 Score=44.54 Aligned_cols=64 Identities=9% Similarity=0.096 Sum_probs=45.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCC----CcEEEEEeCCcccccc-------cCC--ceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMES-------FGT--YVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G----~~VralvR~~~~a~~~-------~g~--~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
|.|.||+|.+|..++..|+..+ .+|..++++++++... ... ..++.. ...+.++++++|.||
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-----~~d~~~~~~~aDiVv 75 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-----TDDPYEAFKDADVVI 75 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-----CCchHHHhCCCCEEE
Confidence 5799999999999999999888 6899998877553211 011 122221 123578899999999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 76 ~t 77 (263)
T cd00650 76 IT 77 (263)
T ss_pred EC
Confidence 86
No 486
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.65 E-value=0.35 Score=40.84 Aligned_cols=94 Identities=11% Similarity=0.093 Sum_probs=61.6
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeC---Cccccc---------------------ccCC--ceEEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAME---------------------SFGT--YVESM 147 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~---~~~a~~---------------------~~g~--~vevV 147 (198)
+.....+|+|.|+ |.+|+.++..|...|. +++.++++ .+.... .+.+ .++.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~ 95 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAY 95 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence 4567788999998 6699999999999998 58888776 222110 0113 24455
Q ss_pred EccCCCHHHHHHhhcCccEEEEcCh--h---HHHHHH-HhCCCCeEEEE
Q 029118 148 AGDASNKKFLKTALRGVRSIICPSE--G---FISNAG-SLKGVQHVILL 190 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~--G---~lldAA-~~~GVkRiV~v 190 (198)
..+++ .+.+.+.++++|.||-+.+ . .+.+.+ +..+.+-+++.
T Consensus 96 ~~~i~-~~~~~~~~~~~DlVi~a~Dn~~~k~~l~~~~~~~~~~~~ii~~ 143 (200)
T TIGR02354 96 DEKIT-EENIDKFFKDADIVCEAFDNAEAKAMLVNAVLEKYKDKYLIAA 143 (200)
T ss_pred eeeCC-HhHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 55654 4677888999999998721 1 245554 44444555553
No 487
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.65 E-value=0.091 Score=47.46 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=33.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KD 132 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~ 132 (198)
+..+++|+|.|-++.+|+.+++.|+++|++|++.- |+
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT 192 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT 192 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence 56788999999999999999999999999999984 44
No 488
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=94.58 E-value=0.29 Score=43.21 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
.++.+|+|.|+ |.+|..++..+...|.+|.++++++++.
T Consensus 165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~ 203 (349)
T TIGR03201 165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL 203 (349)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence 34679999999 9999999999999999999998877654
No 489
>PRK06545 prephenate dehydrogenase; Validated
Probab=94.57 E-value=0.055 Score=49.14 Aligned_cols=66 Identities=15% Similarity=0.074 Sum_probs=45.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|.| +|.+|+.+++.|..+|++|.+..++++........+..++. +. ...+.++++.+|.||.+
T Consensus 2 ~I~iIG-~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~-~~--~~~~~~~~~~aDlVila 67 (359)
T PRK06545 2 TVLIVG-LGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVID-EL--AADLQRAAAEADLIVLA 67 (359)
T ss_pred eEEEEE-eCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCc-cc--ccCHHHHhcCCCEEEEe
Confidence 577775 69999999999999999999999988654321111111110 11 13456788999999987
No 490
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.57 E-value=0.32 Score=44.43 Aligned_cols=97 Identities=18% Similarity=0.094 Sum_probs=63.6
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc---ccc----------------------cccCCce--EE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NAM----------------------ESFGTYV--ES 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~---~a~----------------------~~~g~~v--ev 146 (198)
......+|||.|+ |-+|++++..|...|. +++++..+.- ... ....+.+ +.
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~ 102 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV 102 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 3566779999998 7799999999999997 4555554421 000 0122444 44
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcChh-----HHHHHHHhCCCCeEEEEcccc
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a~G-----~lldAA~~~GVkRiV~vSS~~ 194 (198)
+...++ ++...+.++++|.||.+... .+-++|.+.++. +|+.++.+
T Consensus 103 ~~~~i~-~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip-~v~~~~~g 153 (355)
T PRK05597 103 SVRRLT-WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIP-HVWASILG 153 (355)
T ss_pred EEeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEEec
Confidence 445554 45666788999999988321 256788888865 66665544
No 491
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.57 E-value=0.1 Score=46.00 Aligned_cols=65 Identities=9% Similarity=-0.018 Sum_probs=42.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|.| .|.+|+.+++.|+++|++|.+..|++++.......+++. ..+++.+.+....+|.||.+
T Consensus 2 ~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~s~~~~~~~~~~advVi~~ 66 (299)
T PRK12490 2 KLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITA----RHSLEELVSKLEAPRTIWVM 66 (299)
T ss_pred EEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee----cCCHHHHHHhCCCCCEEEEE
Confidence 577885 899999999999999999999998876543322222221 22343333333346788765
No 492
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=94.55 E-value=0.04 Score=50.71 Aligned_cols=70 Identities=14% Similarity=0.076 Sum_probs=46.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC-------ceE-----EE-EccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-------YVE-----SM-AGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~-------~ve-----vV-~GDl~D~~sL~~AL~GvDa 166 (198)
++|.|.| .|.+|..++..|.++||+|.+..|++++....... +++ .+ .+-+.-..++.++++++|.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 3688886 69999999999999999999999988664322110 000 00 0111111245667899999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||.+
T Consensus 80 vii~ 83 (411)
T TIGR03026 80 IIIC 83 (411)
T ss_pred EEEE
Confidence 9876
No 493
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.55 E-value=0.18 Score=44.99 Aligned_cols=63 Identities=16% Similarity=0.200 Sum_probs=44.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccccc----ccC-----CceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFG-----TYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~----~~g-----~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
++|.|.|+ |.+|..++..|+.+| ++|.++.++++++.. ... ....+..+ | .++++++|.||
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d----~~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D----YADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C----HHHhCCCCEEE
Confidence 47999998 999999999999999 689999988754421 110 11222222 2 24699999999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 73 it 74 (308)
T cd05292 73 IT 74 (308)
T ss_pred Ec
Confidence 87
No 494
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.53 E-value=0.15 Score=47.99 Aligned_cols=82 Identities=12% Similarity=0.072 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--h
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E 172 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~ 172 (198)
..+++|+|.| .|..|..+++.|..+|++|.+..|++....+. ...++++..+.-. ++ -+.++|.||.. . .
T Consensus 13 ~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~-~~----~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 13 ELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA-SD----QLDSFSLVVTSPGWRP 86 (473)
T ss_pred ccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc-hh----HhcCCCEEEeCCCCCC
Confidence 3456799999 77899999999999999999998765443221 1225677665322 12 24678888865 2 1
Q ss_pred h-HHHHHHHhCCC
Q 029118 173 G-FISNAGSLKGV 184 (198)
Q Consensus 173 G-~lldAA~~~GV 184 (198)
. -.+.+|++.|+
T Consensus 87 ~~p~~~~a~~~gi 99 (473)
T PRK00141 87 DSPLLVDAQSQGL 99 (473)
T ss_pred CCHHHHHHHHCCC
Confidence 1 14555555554
No 495
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.51 E-value=0.38 Score=40.91 Aligned_cols=95 Identities=9% Similarity=0.148 Sum_probs=62.2
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCC---cccc---------------------cccCCc--eEEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAM---------------------ESFGTY--VESM 147 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~---~~a~---------------------~~~g~~--vevV 147 (198)
+.....+|+|.|+ |-+|++++..|...|.. +++++.+. +... ..+.+. ++.+
T Consensus 24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~ 102 (212)
T PRK08644 24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH 102 (212)
T ss_pred HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 4667778999996 77999999999999975 77776652 1100 011233 4445
Q ss_pred EccCCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhC-CCCeEEEEcc
Q 029118 148 AGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLK-GVQHVILLSQ 192 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~-GVkRiV~vSS 192 (198)
...+++ +.+.+.++++|.||.+. .. .+.+.|.+. + ..+|+.+.
T Consensus 103 ~~~i~~-~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~-~p~I~~~~ 151 (212)
T PRK08644 103 NEKIDE-DNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPG-KKLVAASG 151 (212)
T ss_pred eeecCH-HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCC-CCEEEeeh
Confidence 555544 56677889999999772 11 266777777 6 44555443
No 496
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=94.49 E-value=0.17 Score=46.36 Aligned_cols=70 Identities=16% Similarity=0.245 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccc--ccccCCceEEEEccCCCHHHHHHhhc----CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALR----GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a--~~~~g~~vevV~GDl~D~~sL~~AL~----GvDaVIh 169 (198)
.+++.|||.||+|-+|+.+++.+...| ..|.+.. +.++. .+.++. -...|+.|++.++...+ ++|.|+.
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 446789999999999999998888888 4444444 44432 233341 23457888777776665 7999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
|
T Consensus 232 ~ 232 (347)
T KOG1198|consen 232 C 232 (347)
T ss_pred C
Confidence 8
No 497
>PLN03139 formate dehydrogenase; Provisional
Probab=94.48 E-value=0.098 Score=48.78 Aligned_cols=67 Identities=12% Similarity=0.029 Sum_probs=48.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.| .|.||+.+++.|..-|.+|.+..|...+.......+++. .++++++++.+|.|+++
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~sDvV~l~ 262 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKF-------EEDLDAMLPKCDVVVIN 262 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCcee-------cCCHHHHHhhCCEEEEe
Confidence 46788999999 799999999999999999998877643221111111221 23678889999999854
No 498
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=94.47 E-value=0.15 Score=43.46 Aligned_cols=73 Identities=11% Similarity=0.006 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceE-EEEccCCC--HHHHHHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SMAGDASN--KKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~ve-vV~GDl~D--~~sL~~AL--~GvDaVIh~ 170 (198)
+..+|||+||+|.+|+.++..+.+.|.+|.++++++++.......+++ ++...-.+ ...+.+.. +++|.+|.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 217 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDC 217 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEEC
Confidence 457899999999999999999999999988888776543222111122 22211111 22344444 468999987
No 499
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=94.47 E-value=0.19 Score=43.93 Aligned_cols=84 Identities=11% Similarity=0.141 Sum_probs=46.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCcEEEE-EeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEcC-hhH
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKAL-VKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS-EGF 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~--G~~Vral-vR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G~ 174 (198)
++|.|.|. |.+|+.+++.|... ++++.++ .|+++++..... .++.. +.| +++.+.++|.|+.+. ...
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~----~~~---~~ell~~~DvVvi~a~~~~ 73 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA----CLS---IDELVEDVDLVVECASVNA 73 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee----ECC---HHHHhcCCCEEEEcCChHH
Confidence 57999994 99999999998875 3565554 345444322111 01111 123 344457899998772 111
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
++..+.++| +++|.+|.
T Consensus 74 ~~~~~~~al~~G-k~Vvv~s~ 93 (265)
T PRK13304 74 VEEVVPKSLENG-KDVIIMSV 93 (265)
T ss_pred HHHHHHHHHHcC-CCEEEEch
Confidence 333344455 45555443
No 500
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.46 E-value=0.28 Score=45.20 Aligned_cols=84 Identities=8% Similarity=-0.042 Sum_probs=58.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--h
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E 172 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~ 172 (198)
+|+|.| .|-.|..+++.|.++|++|.+..+++.... .....++++..+.-.+.+.+...+.+.|.||.. . .
T Consensus 2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~~ 80 (459)
T PRK02705 2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIPW 80 (459)
T ss_pred eEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCCC
Confidence 588888 566999999999999999999987654311 122335777777655666666778889999875 2 1
Q ss_pred -hHHHHHHHhCCCC
Q 029118 173 -GFISNAGSLKGVQ 185 (198)
Q Consensus 173 -G~lldAA~~~GVk 185 (198)
-..+.+|++.|++
T Consensus 81 ~~~~~~~a~~~~i~ 94 (459)
T PRK02705 81 DHPTLVELRERGIE 94 (459)
T ss_pred CCHHHHHHHHcCCc
Confidence 1255555665554
Done!