Query 029120
Match_columns 198
No_of_seqs 177 out of 1089
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 12:32:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wqk_A 5'-nucleotidase SURE; S 100.0 2.3E-52 8E-57 361.2 13.2 124 66-196 1-124 (251)
2 1j9j_A Stationary phase surviV 100.0 4.4E-52 1.5E-56 360.0 12.5 124 67-196 1-125 (247)
3 2e6c_A 5'-nucleotidase SURE; S 100.0 1.9E-51 6.6E-56 355.5 12.2 122 67-196 1-126 (244)
4 2phj_A 5'-nucleotidase SURE; S 100.0 4.9E-51 1.7E-55 354.8 12.8 123 67-196 2-124 (251)
5 1l5x_A SurviVal protein E; str 100.0 3.8E-51 1.3E-55 359.7 11.8 123 67-196 1-124 (280)
6 2v4n_A Multifunctional protein 100.0 4.3E-51 1.5E-55 355.2 11.0 122 66-196 1-123 (254)
7 3ty2_A 5'-nucleotidase SURE; s 100.0 2.9E-51 9.8E-56 358.2 9.2 127 61-196 6-132 (261)
8 3fro_A GLGA glycogen synthase; 94.9 0.16 5.4E-06 42.5 9.4 41 65-106 1-47 (439)
9 3oti_A CALG3; calicheamicin, T 89.2 0.24 8.2E-06 42.1 3.3 41 61-102 15-56 (398)
10 4amg_A Snogd; transferase, pol 88.7 0.45 1.5E-05 39.9 4.6 47 57-105 13-61 (400)
11 2iuy_A Avigt4, glycosyltransfe 87.3 0.42 1.4E-05 39.3 3.5 42 64-106 1-59 (342)
12 4fzr_A SSFS6; structural genom 85.3 0.52 1.8E-05 39.9 3.1 40 63-103 12-52 (398)
13 3otg_A CALG1; calicheamicin, T 82.7 0.87 3E-05 38.3 3.4 41 62-103 16-57 (412)
14 3tsa_A SPNG, NDP-rhamnosyltran 78.6 1.2 4E-05 37.4 2.8 37 66-103 1-38 (391)
15 3rsc_A CALG2; TDP, enediyne, s 78.5 1.4 4.8E-05 37.2 3.3 45 59-104 13-58 (415)
16 3kkl_A Probable chaperone prot 77.8 1.9 6.4E-05 36.1 3.8 43 63-106 2-54 (244)
17 2r60_A Glycosyl transferase, g 77.3 1.7 5.7E-05 37.9 3.5 39 66-105 7-61 (499)
18 3n7t_A Macrophage binding prot 77.2 2.2 7.7E-05 35.8 4.2 42 64-106 9-60 (247)
19 2gek_A Phosphatidylinositol ma 75.2 4.4 0.00015 33.5 5.4 42 64-106 18-64 (406)
20 3c48_A Predicted glycosyltrans 74.9 2.8 9.5E-05 35.4 4.1 42 63-105 17-70 (438)
21 2yjn_A ERYCIII, glycosyltransf 74.3 3 0.0001 36.1 4.2 41 63-104 17-58 (441)
22 3ia7_A CALG4; glycosysltransfe 74.1 2.3 7.8E-05 35.3 3.4 37 66-103 4-41 (402)
23 1rzu_A Glycogen synthase 1; gl 71.4 2.3 7.8E-05 36.7 2.8 37 67-104 1-44 (485)
24 2qzs_A Glycogen synthase; glyc 70.7 2.6 8.8E-05 36.4 3.0 37 67-104 1-44 (485)
25 2iya_A OLEI, oleandomycin glyc 69.7 5 0.00017 34.2 4.6 39 64-106 10-52 (424)
26 2x6q_A Trehalose-synthase TRET 69.6 8.2 0.00028 32.4 5.8 40 64-105 38-81 (416)
27 3h4t_A Glycosyltransferase GTF 69.3 1.9 6.6E-05 37.1 1.9 37 67-104 1-38 (404)
28 2lpm_A Two-component response 68.7 3.2 0.00011 31.2 2.8 33 61-97 3-35 (123)
29 2iw1_A Lipopolysaccharide core 68.7 4.2 0.00014 33.2 3.7 37 67-104 1-41 (374)
30 1wd5_A Hypothetical protein TT 68.5 8.2 0.00028 30.8 5.4 41 65-106 119-160 (208)
31 1n57_A Chaperone HSP31, protei 68.2 4.5 0.00015 34.5 4.0 31 75-106 71-101 (291)
32 1f0k_A MURG, UDP-N-acetylgluco 67.9 5.1 0.00017 32.8 4.1 35 66-104 6-44 (364)
33 1rw7_A YDR533CP; alpha-beta sa 66.4 4.3 0.00015 33.2 3.4 41 64-105 3-53 (243)
34 4e08_A DJ-1 beta; flavodoxin-l 66.3 3 0.0001 32.5 2.3 34 68-104 9-42 (190)
35 3vue_A GBSS-I, granule-bound s 63.2 8.4 0.00029 35.3 5.0 43 62-105 5-54 (536)
36 3efe_A THIJ/PFPI family protei 62.0 8 0.00028 30.9 4.2 40 63-105 4-51 (212)
37 3l18_A Intracellular protease 61.5 3.8 0.00013 31.1 2.0 39 66-105 2-40 (168)
38 1rrv_A Glycosyltransferase GTF 60.8 6.5 0.00022 33.5 3.6 34 67-104 1-38 (416)
39 1oi4_A Hypothetical protein YH 60.2 14 0.00049 28.8 5.3 39 67-106 24-62 (193)
40 1iir_A Glycosyltransferase GTF 58.8 10 0.00035 32.4 4.5 35 67-105 1-39 (415)
41 2p6p_A Glycosyl transferase; X 58.8 5.9 0.0002 33.0 2.9 37 67-104 1-38 (384)
42 2iuf_A Catalase; oxidoreductas 58.5 3.6 0.00012 40.2 1.7 42 62-104 527-568 (688)
43 3h5i_A Response regulator/sens 57.6 10 0.00036 26.7 3.7 33 63-99 2-34 (140)
44 1u9c_A APC35852; structural ge 57.4 11 0.00036 30.0 4.1 41 65-106 6-54 (224)
45 2iyf_A OLED, oleandomycin glyc 55.3 7.5 0.00026 32.9 3.0 40 65-105 6-46 (430)
46 2vrn_A Protease I, DR1199; cys 54.4 7.3 0.00025 30.0 2.6 40 65-105 8-47 (190)
47 2rdm_A Response regulator rece 54.2 16 0.00055 24.9 4.1 33 63-99 2-34 (132)
48 3re1_A Uroporphyrinogen-III sy 53.3 8.6 0.00029 31.8 3.0 35 60-99 8-42 (269)
49 2xgg_A Microneme protein 2; A/ 52.8 11 0.00037 28.6 3.3 35 64-101 122-158 (178)
50 3gpi_A NAD-dependent epimerase 51.7 22 0.00074 28.5 5.1 34 65-105 2-37 (286)
51 3to5_A CHEY homolog; alpha(5)b 51.6 15 0.00052 27.5 3.9 35 63-101 9-43 (134)
52 3ej6_A Catalase-3; heme, hydro 50.1 34 0.0012 33.4 7.0 41 62-105 535-576 (688)
53 2fwm_X 2,3-dihydro-2,3-dihydro 49.9 69 0.0024 25.3 7.8 77 62-161 3-80 (250)
54 2dtx_A Glucose 1-dehydrogenase 48.9 45 0.0015 26.8 6.7 74 64-161 6-80 (264)
55 4gdh_A DJ-1, uncharacterized p 46.3 22 0.00076 28.0 4.3 41 63-106 3-43 (194)
56 2pn1_A Carbamoylphosphate synt 45.5 39 0.0013 27.7 5.8 36 64-104 2-38 (331)
57 2cve_A Hypothetical protein TT 45.5 17 0.00057 30.1 3.5 30 71-101 59-90 (191)
58 4hcj_A THIJ/PFPI domain protei 45.4 4.7 0.00016 32.0 0.2 41 64-105 6-46 (177)
59 3i42_A Response regulator rece 45.2 17 0.00059 24.7 3.1 30 65-98 2-31 (127)
60 1vi7_A Hypothetical protein YI 45.0 17 0.00057 30.7 3.5 30 72-102 72-103 (217)
61 2r85_A PURP protein PF1517; AT 44.2 25 0.00085 28.7 4.4 34 66-105 2-35 (334)
62 3jte_A Response regulator rece 43.9 25 0.00085 24.5 3.8 31 64-98 1-31 (143)
63 3ius_A Uncharacterized conserv 43.8 28 0.00096 27.6 4.6 31 66-103 5-37 (286)
64 3okp_A GDP-mannose-dependent a 43.1 6.4 0.00022 32.2 0.6 40 64-106 2-46 (394)
65 1sy7_A Catalase 1; heme oxidat 42.1 87 0.003 30.5 8.5 38 67-105 535-572 (715)
66 4gi5_A Quinone reductase; prot 41.9 16 0.00053 31.4 2.9 41 59-100 15-59 (280)
67 2x0d_A WSAF; GT4 family, trans 41.8 6.5 0.00022 34.4 0.5 41 63-104 43-89 (413)
68 1ccw_A Protein (glutamate muta 41.7 31 0.0011 25.9 4.3 34 65-100 2-37 (137)
69 3hzh_A Chemotaxis response reg 41.1 26 0.0009 25.2 3.7 32 63-98 33-64 (157)
70 1vhq_A Enhancing lycopene bios 41.1 17 0.00059 29.3 2.9 41 64-105 6-49 (232)
71 3gt7_A Sensor protein; structu 40.0 28 0.00096 24.9 3.7 33 63-99 4-36 (154)
72 2rk3_A Protein DJ-1; parkinson 39.9 27 0.00091 27.1 3.8 36 67-105 6-41 (197)
73 3ibs_A Conserved hypothetical 38.5 32 0.0011 26.3 4.0 38 64-104 111-149 (218)
74 3hv2_A Response regulator/HD d 38.0 41 0.0014 23.8 4.3 31 64-98 12-42 (153)
75 3ot1_A 4-methyl-5(B-hydroxyeth 37.6 20 0.00067 28.4 2.7 36 68-104 11-46 (208)
76 2qr3_A Two-component system re 37.4 32 0.0011 23.6 3.5 30 65-98 2-31 (140)
77 3uk7_A Class I glutamine amido 37.3 32 0.0011 29.8 4.3 39 67-106 206-244 (396)
78 2fex_A Conserved hypothetical 37.0 37 0.0013 26.1 4.1 37 68-105 3-40 (188)
79 2geb_A Hypoxanthine-guanine ph 36.8 30 0.001 27.0 3.6 43 65-108 97-140 (185)
80 3grc_A Sensor protein, kinase; 36.7 40 0.0014 23.3 3.9 31 65-99 5-35 (140)
81 1kjq_A GART 2, phosphoribosylg 36.4 60 0.0021 27.3 5.7 39 63-106 8-46 (391)
82 3eod_A Protein HNR; response r 36.4 48 0.0016 22.5 4.3 32 64-99 5-36 (130)
83 3cg4_A Response regulator rece 36.3 41 0.0014 23.1 4.0 33 63-99 4-36 (142)
84 2ab0_A YAJL; DJ-1/THIJ superfa 36.0 35 0.0012 26.8 3.9 35 68-105 6-40 (205)
85 1hdo_A Biliverdin IX beta redu 35.9 47 0.0016 24.5 4.5 34 66-103 3-36 (206)
86 4dad_A Putative pilus assembly 35.9 36 0.0012 23.8 3.6 35 63-100 17-51 (146)
87 3t6k_A Response regulator rece 35.6 42 0.0014 23.4 4.0 31 64-98 2-32 (136)
88 3m6m_D Sensory/regulatory prot 35.6 29 0.00099 24.6 3.1 33 63-99 11-43 (143)
89 1id1_A Putative potassium chan 35.6 42 0.0014 24.6 4.1 34 65-103 2-35 (153)
90 3d7l_A LIN1944 protein; APC893 35.4 1.3E+02 0.0045 22.4 7.0 32 66-103 3-35 (202)
91 1pt6_A Integrin alpha-1; cell 35.2 33 0.0011 26.5 3.6 36 64-102 109-146 (213)
92 2zay_A Response regulator rece 34.8 32 0.0011 24.0 3.2 31 64-98 6-36 (147)
93 1hgx_A HGXPRTASE, hypoxanthine 34.7 37 0.0013 26.3 3.9 42 65-107 94-136 (183)
94 1z7g_A HGPRT, HGPRTASE, hypoxa 34.6 31 0.0011 27.9 3.5 42 65-107 125-167 (217)
95 1v7p_C Integrin alpha-2; snake 34.3 35 0.0012 26.1 3.6 35 65-102 109-145 (200)
96 3kht_A Response regulator; PSI 34.2 36 0.0012 23.7 3.4 28 63-93 2-29 (144)
97 2b2x_A Integrin alpha-1; compu 34.0 32 0.0011 26.8 3.4 36 64-102 124-161 (223)
98 2jbh_A Phosphoribosyltransfera 33.9 30 0.001 28.1 3.3 43 65-108 133-176 (225)
99 1pzm_A HGPRT, hypoxanthine-gua 33.8 31 0.0011 27.8 3.3 43 65-108 117-160 (211)
100 1tc1_A Protein (hypoxanthine p 33.8 30 0.001 28.3 3.3 43 65-108 102-145 (220)
101 1ijb_A VON willebrand factor; 33.6 38 0.0013 26.1 3.7 35 64-101 115-153 (202)
102 4b4o_A Epimerase family protei 33.5 26 0.00089 28.2 2.9 32 67-102 1-32 (298)
103 2nm0_A Probable 3-oxacyl-(acyl 33.4 1.7E+02 0.0059 23.3 7.8 75 63-161 18-93 (253)
104 1yfz_A Hypoxanthine-guanine ph 33.2 36 0.0012 27.0 3.6 43 65-108 117-160 (205)
105 3mm4_A Histidine kinase homolo 33.0 58 0.002 24.9 4.7 33 63-98 58-90 (206)
106 3ono_A Ribose/galactose isomer 32.8 34 0.0012 28.9 3.5 35 66-101 3-40 (214)
107 4dim_A Phosphoribosylglycinami 32.6 40 0.0014 28.7 4.0 34 64-102 5-38 (403)
108 3lte_A Response regulator; str 32.6 46 0.0016 22.6 3.7 31 65-99 5-35 (132)
109 3l3b_A ES1 family protein; ssg 32.3 50 0.0017 27.3 4.5 39 67-106 26-67 (242)
110 2gkg_A Response regulator homo 32.2 44 0.0015 22.2 3.5 30 65-98 4-33 (127)
111 3u27_C Microcompartments prote 32.2 24 0.00083 29.9 2.5 54 133-189 152-206 (220)
112 3hdv_A Response regulator; PSI 31.0 53 0.0018 22.5 3.8 32 65-100 6-37 (136)
113 2vyo_A ECU11_0510, chitooligos 30.9 38 0.0013 27.8 3.5 36 63-99 22-57 (254)
114 3ew7_A LMO0794 protein; Q8Y8U8 30.4 64 0.0022 24.2 4.5 34 67-104 1-34 (221)
115 2rjn_A Response regulator rece 30.3 60 0.002 22.9 4.1 32 63-98 4-35 (154)
116 1sph_A Histidine-containing ph 30.2 28 0.00096 24.6 2.2 76 67-150 4-81 (88)
117 1kkl_H Phosphocarrier protein 30.0 37 0.0013 25.0 2.9 81 61-149 10-92 (100)
118 3e8x_A Putative NAD-dependent 29.8 68 0.0023 24.8 4.6 38 63-104 18-55 (236)
119 3h2s_A Putative NADH-flavin re 29.7 66 0.0023 24.3 4.5 33 67-103 1-33 (224)
120 1vdm_A Purine phosphoribosyltr 29.7 44 0.0015 24.8 3.4 35 65-100 82-117 (153)
121 2o2s_A Enoyl-acyl carrier redu 29.5 87 0.003 25.8 5.5 36 62-101 5-42 (315)
122 3gem_A Short chain dehydrogena 29.3 24 0.00081 28.6 1.9 83 61-161 22-105 (260)
123 1y51_A Phosphocarrier protein 29.3 34 0.0012 24.2 2.6 76 67-150 4-81 (88)
124 1d7o_A Enoyl-[acyl-carrier pro 29.2 91 0.0031 25.2 5.5 36 62-101 4-41 (297)
125 1fsg_A HGPRTASE, hypoxanthine- 29.1 41 0.0014 27.6 3.3 43 65-108 141-184 (233)
126 3hdg_A Uncharacterized protein 29.0 55 0.0019 22.4 3.6 27 64-93 5-31 (137)
127 3kto_A Response regulator rece 28.9 46 0.0016 23.0 3.2 31 65-99 5-35 (136)
128 2ptg_A Enoyl-acyl carrier redu 28.9 1E+02 0.0036 25.2 5.9 36 62-101 5-42 (319)
129 3rqi_A Response regulator prot 28.7 56 0.0019 24.2 3.8 31 64-98 5-35 (184)
130 3n2n_F Anthrax toxin receptor 28.5 60 0.0021 23.9 4.0 35 65-102 107-145 (185)
131 3lqk_A Dipicolinate synthase s 28.0 72 0.0025 26.0 4.6 44 62-106 3-47 (201)
132 4hqf_A Thrombospondin-related 27.9 52 0.0018 26.8 3.8 35 65-102 129-165 (281)
133 2qxy_A Response regulator; reg 27.9 65 0.0022 22.2 3.8 29 66-98 4-32 (142)
134 1ka5_A Phosphocarrier protein 27.9 31 0.0011 24.5 2.1 75 67-149 4-80 (88)
135 1dku_A Protein (phosphoribosyl 27.9 59 0.002 28.1 4.3 36 65-101 216-252 (317)
136 3t8y_A CHEB, chemotaxis respon 27.8 50 0.0017 24.0 3.3 31 60-93 19-49 (164)
137 1ka9_H Imidazole glycerol phos 27.7 89 0.003 24.2 5.0 32 67-102 3-34 (200)
138 1xhf_A DYE resistance, aerobic 27.4 69 0.0024 21.3 3.8 30 65-98 2-31 (123)
139 1vch_A Phosphoribosyltransfera 27.4 44 0.0015 25.4 3.1 34 65-99 119-153 (175)
140 1a3c_A PYRR, pyrimidine operon 27.4 52 0.0018 25.2 3.5 39 65-104 97-137 (181)
141 3crn_A Response regulator rece 27.2 68 0.0023 22.0 3.8 30 65-98 2-31 (132)
142 2b4a_A BH3024; flavodoxin-like 27.1 73 0.0025 21.9 4.0 33 63-99 12-44 (138)
143 1k66_A Phytochrome response re 26.9 76 0.0026 21.7 4.0 28 63-93 3-30 (149)
144 1qkk_A DCTD, C4-dicarboxylate 26.8 63 0.0022 22.8 3.7 31 65-99 2-32 (155)
145 4fs3_A Enoyl-[acyl-carrier-pro 26.7 1.1E+02 0.0038 24.5 5.6 36 64-103 4-41 (256)
146 3zbd_A NSP1, P9, non-structura 26.4 16 0.00055 28.2 0.4 31 59-90 6-36 (113)
147 1ny1_A Probable polysaccharide 26.2 51 0.0017 26.7 3.4 31 64-94 40-70 (240)
148 2wyu_A Enoyl-[acyl carrier pro 26.1 85 0.0029 24.9 4.7 37 64-103 6-43 (261)
149 3gfh_A Ethanolamine utilizatio 26.0 12 0.00042 31.8 -0.4 53 133-188 150-203 (225)
150 3ttv_A Catalase HPII; heme ori 25.6 38 0.0013 33.5 2.9 40 63-105 599-638 (753)
151 3f6c_A Positive transcription 25.6 70 0.0024 21.7 3.6 35 66-104 1-35 (134)
152 2cc0_A Acetyl-xylan esterase; 25.5 52 0.0018 25.6 3.2 28 66-94 4-31 (195)
153 1cyd_A Carbonyl reductase; sho 25.4 1.1E+02 0.0039 23.4 5.2 36 63-103 4-40 (244)
154 3awd_A GOX2181, putative polyo 25.4 1.1E+02 0.0036 23.9 5.0 38 61-103 8-46 (260)
155 3eqz_A Response regulator; str 25.2 66 0.0023 21.7 3.4 31 65-99 2-32 (135)
156 2pq6_A UDP-glucuronosyl/UDP-gl 25.2 75 0.0026 28.1 4.6 38 64-105 6-47 (482)
157 1k68_A Phytochrome response re 25.1 82 0.0028 21.2 3.9 25 66-93 2-26 (140)
158 1y0b_A Xanthine phosphoribosyl 25.0 51 0.0017 25.7 3.1 39 65-104 119-158 (197)
159 1lss_A TRK system potassium up 25.0 78 0.0027 21.9 3.8 34 66-104 4-37 (140)
160 2z1m_A GDP-D-mannose dehydrata 24.9 1E+02 0.0035 24.7 5.0 35 65-103 2-36 (345)
161 3r0j_A Possible two component 24.8 78 0.0027 24.7 4.2 32 63-98 20-51 (250)
162 3dqp_A Oxidoreductase YLBE; al 24.8 2.2E+02 0.0077 21.4 8.2 96 67-189 1-97 (219)
163 3h1g_A Chemotaxis protein CHEY 24.7 76 0.0026 21.6 3.7 26 65-93 4-29 (129)
164 3lua_A Response regulator rece 24.6 87 0.003 21.5 4.0 30 65-98 3-33 (140)
165 1ao0_A Glutamine phosphoribosy 24.5 85 0.0029 28.2 4.8 35 66-101 338-373 (459)
166 2pzm_A Putative nucleotide sug 24.4 1E+02 0.0035 25.1 5.0 36 63-102 17-52 (330)
167 3ccd_A Phosphocarrier protein 24.4 35 0.0012 24.0 1.8 76 68-150 5-81 (85)
168 1v4v_A UDP-N-acetylglucosamine 23.9 26 0.0009 28.8 1.3 35 67-102 6-41 (376)
169 1zn8_A APRT, adenine phosphori 23.8 56 0.0019 25.1 3.1 41 65-106 119-160 (180)
170 2c5a_A GDP-mannose-3', 5'-epim 23.7 1.6E+02 0.0055 24.6 6.2 39 62-104 25-63 (379)
171 3cg0_A Response regulator rece 23.1 81 0.0028 21.5 3.6 31 64-98 7-37 (140)
172 1shu_X Anthrax toxin receptor 23.0 97 0.0033 22.7 4.2 35 64-101 103-141 (182)
173 2c71_A Glycoside hydrolase, fa 22.9 54 0.0018 26.2 2.9 29 66-94 4-32 (216)
174 2hy7_A Glucuronosyltransferase 22.9 83 0.0029 26.9 4.3 35 64-100 12-49 (406)
175 2qsj_A DNA-binding response re 22.8 59 0.002 22.8 2.9 26 65-93 2-28 (154)
176 2dzd_A Pyruvate carboxylase; b 22.5 58 0.002 28.4 3.2 35 67-106 7-41 (461)
177 1lh0_A OMP synthase; loop clos 22.3 1.2E+02 0.0042 24.2 5.0 37 64-102 116-153 (213)
178 3fse_A Two-domain protein cont 22.0 67 0.0023 28.5 3.6 38 68-106 12-49 (365)
179 2dy0_A APRT, adenine phosphori 22.0 63 0.0021 25.2 3.1 32 65-97 125-157 (190)
180 2hq1_A Glucose/ribitol dehydro 21.9 1.1E+02 0.0039 23.4 4.6 32 64-100 3-35 (247)
181 1fmc_A 7 alpha-hydroxysteroid 21.6 1.1E+02 0.0038 23.6 4.5 37 61-102 6-43 (255)
182 2y8u_A Chitin deacetylase; hyd 21.5 86 0.0029 25.4 3.9 29 65-94 31-59 (230)
183 3cz5_A Two-component response 21.5 66 0.0023 22.6 2.9 32 63-98 2-34 (153)
184 3zqu_A Probable aromatic acid 21.4 1E+02 0.0035 25.3 4.3 35 67-102 5-39 (209)
185 1dbw_A Transcriptional regulat 21.4 1.1E+02 0.0036 20.6 3.9 31 65-99 2-32 (126)
186 3beo_A UDP-N-acetylglucosamine 21.3 35 0.0012 27.8 1.5 38 66-103 8-46 (375)
187 3eul_A Possible nitrate/nitrit 21.3 75 0.0026 22.3 3.2 29 62-93 11-39 (152)
188 3ix7_A Uncharacterized protein 21.3 44 0.0015 25.9 2.0 24 68-91 99-131 (134)
189 2ywu_A Hypoxanthine-guanine ph 21.3 90 0.0031 24.5 3.9 40 65-105 94-134 (181)
190 3heb_A Response regulator rece 21.2 98 0.0033 21.7 3.8 26 65-93 3-28 (152)
191 3c3m_A Response regulator rece 21.0 1.1E+02 0.0038 21.0 4.0 29 66-98 3-31 (138)
192 2iw0_A Chitin deacetylase; hyd 21.0 78 0.0027 25.9 3.6 30 64-94 39-68 (254)
193 3o38_A Short chain dehydrogena 21.0 2.3E+02 0.0079 22.2 6.3 37 63-103 19-56 (266)
194 1ptf_A Histidine-containing ph 21.0 65 0.0022 22.7 2.7 75 68-150 5-81 (88)
195 4hqo_A Sporozoite surface prot 20.9 85 0.0029 25.4 3.8 34 65-101 126-161 (266)
196 1ufr_A TT1027, PYR mRNA-bindin 20.8 75 0.0026 24.4 3.3 40 65-105 95-136 (181)
197 2qvg_A Two component response 20.8 94 0.0032 21.3 3.5 26 65-93 6-31 (143)
198 2pln_A HP1043, response regula 20.8 1.3E+02 0.0043 20.6 4.2 32 63-98 15-46 (137)
199 1u9y_A RPPK;, ribose-phosphate 20.7 80 0.0027 26.7 3.7 36 65-101 204-240 (284)
200 2p91_A Enoyl-[acyl-carrier-pro 20.7 1.5E+02 0.005 23.8 5.2 36 64-103 19-56 (285)
201 1n3y_A Integrin alpha-X; alpha 20.6 74 0.0025 23.8 3.1 34 65-101 111-147 (198)
202 1uas_A Alpha-galactosidase; TI 20.6 55 0.0019 28.3 2.7 23 81-104 75-98 (362)
203 4id9_A Short-chain dehydrogena 20.5 2.3E+02 0.0078 22.9 6.3 39 62-104 15-53 (347)
204 1dcf_A ETR1 protein; beta-alph 20.5 1.5E+02 0.0052 20.1 4.6 31 64-98 5-35 (136)
205 1l1q_A Adenine phosphoribosylt 20.5 81 0.0028 24.5 3.4 30 65-95 116-146 (186)
206 2j48_A Two-component sensor ki 20.5 1.2E+02 0.0042 19.4 3.9 29 67-99 2-30 (119)
207 3le1_A Phosphotransferase syst 20.4 53 0.0018 23.2 2.2 75 68-150 5-81 (88)
208 1ja9_A 4HNR, 1,3,6,8-tetrahydr 20.4 1.4E+02 0.0048 23.3 4.9 36 62-102 17-53 (274)
209 3rht_A (gatase1)-like protein; 20.4 91 0.0031 26.3 4.0 36 67-104 5-40 (259)
210 1g2q_A Adenine phosphoribosylt 20.4 71 0.0024 24.8 3.1 38 65-103 121-159 (187)
211 1qo0_D AMIR; binding protein, 20.3 1.1E+02 0.0038 22.6 4.1 35 64-102 10-44 (196)
212 3uk7_A Class I glutamine amido 20.3 1E+02 0.0035 26.5 4.3 35 68-105 16-50 (396)
213 4as2_A Phosphorylcholine phosp 20.2 56 0.0019 28.3 2.6 21 79-100 145-165 (327)
214 2p1z_A Phosphoribosyltransfera 20.1 77 0.0026 24.6 3.2 36 64-100 112-148 (180)
215 3oy2_A Glycosyltransferase B73 20.0 1E+02 0.0035 25.4 4.1 37 67-105 1-41 (413)
No 1
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=100.00 E-value=2.3e-52 Score=361.24 Aligned_cols=124 Identities=35% Similarity=0.493 Sum_probs=115.3
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHH
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLA 145 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~la 145 (198)
.|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++|+++++++ ...+|.|+|||+|||++|
T Consensus 1 Mp~ILlTNDDGi~apGi~~L~~~l~~~g--~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~--~~~~~~v~GTPaDCV~la 76 (251)
T 2wqk_A 1 MPTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKID--TDFYTVIDGTPADCVHLG 76 (251)
T ss_dssp -CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEE--TTEEEETTCCHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHhCC--CEEEEeeCCCCcccccCcCCCCCceeEEee--ccceeecCCChHHHHhhh
Confidence 3799999999999999999999999987 799999999999999999999999999875 345688999999999999
Q ss_pred HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120 146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE 196 (198)
Q Consensus 146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa 196 (198)
|+++|+ +.+|||||||||+|.|+|.+++||||||||+||+++| |||||
T Consensus 77 l~~~l~-~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~G--ipaIA 124 (251)
T 2wqk_A 77 YRVILE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILG--IPSIA 124 (251)
T ss_dssp HHTTTT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTT--CCEEE
T ss_pred hhhhcC-CCCCCEEEeCccCCCccccceecchHHHHHHHHHhcC--CCeEE
Confidence 998764 4689999999999999999999999999999999986 89998
No 2
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=100.00 E-value=4.4e-52 Score=360.00 Aligned_cols=124 Identities=35% Similarity=0.560 Sum_probs=116.2
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeC-CceeEEEcCchHHHHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN-GATAYEVSGTPVDCVSLA 145 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~-g~~~~~V~GTPaDCV~la 145 (198)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||++|
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGIQSKGIIVLAELLSEEH--EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 799999999999999999999999977 89999999999999999999999999998643 445799999999999999
Q ss_pred HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120 146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE 196 (198)
Q Consensus 146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa 196 (198)
|+++| ..+|||||||||+|.|+|.+++||||||||+||+++| |||||
T Consensus 79 l~~l~--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA 125 (247)
T 1j9j_A 79 YNVVM--DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMN--IPSIA 125 (247)
T ss_dssp HHTTS--TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTT--CCEEE
T ss_pred HHhhc--cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcC--CCeEE
Confidence 99976 3689999999999999999999999999999999986 89997
No 3
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=100.00 E-value=1.9e-51 Score=355.46 Aligned_cols=122 Identities=37% Similarity=0.555 Sum_probs=114.2
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeC----CceeEEEcCchHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEIN----GATAYEVSGTPVDCV 142 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~----g~~~~~V~GTPaDCV 142 (198)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++|+++++++.. +...|+|+|||+|||
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 799999999999999999999999877 89999999999999999999999999998643 335699999999999
Q ss_pred HHHHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120 143 SLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE 196 (198)
Q Consensus 143 ~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa 196 (198)
++||+ | +.+|||||||||+|.|+|.+++||||||||+||+++| |||||
T Consensus 79 ~lal~--l--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA 126 (244)
T 2e6c_A 79 ALGLH--L--FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFG--LSAAA 126 (244)
T ss_dssp HHHHH--H--SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTT--CEEEE
T ss_pred HHHHc--C--CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcC--CCeEE
Confidence 99999 4 4689999999999999999999999999999999986 89997
No 4
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=100.00 E-value=4.9e-51 Score=354.77 Aligned_cols=123 Identities=36% Similarity=0.503 Sum_probs=115.2
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~laL 146 (198)
|||||||||||+||||++|+++|++.| +|+||||+++|||+||++|+++|+++++++. +.. |+|+|||+|||++||
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~-~~~-~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT-DFY-TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET-TEE-EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC--CEEEEecCCCccCCccceecCCCeEEEEecC-CCe-EEECCCHHHHHHHHH
Confidence 899999999999999999999999987 9999999999999999999999999999863 322 999999999999999
Q ss_pred hcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120 147 SGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE 196 (198)
Q Consensus 147 ~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa 196 (198)
++++. +.+|||||||||+|.|+|.+++||||||||+||+++| |||||
T Consensus 78 ~~l~~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA 124 (251)
T 2phj_A 78 RVILE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILG--IPSIA 124 (251)
T ss_dssp HTTTT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTT--CCEEE
T ss_pred HHhcC-CCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcC--CCeEE
Confidence 98763 4689999999999999999999999999999999986 89997
No 5
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=100.00 E-value=3.8e-51 Score=359.71 Aligned_cols=123 Identities=35% Similarity=0.465 Sum_probs=116.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHHHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLAL 146 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV~laL 146 (198)
|||||||||||+||||++|+++|++.| +|+||||+++|||+||++|+.+|+++++++..+...|+|+|||+|||++||
T Consensus 1 M~ILlTNDDGi~ApGi~aL~~aL~~~g--~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal 78 (280)
T 1l5x_A 1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT 78 (280)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence 799999999999999999999999987 899999999999999999999999999987545467999999999999999
Q ss_pred hcccCCCCCCcEEEecCCCCCCCcCc-ccchhhHHHHHHHHHcCCCCCccc
Q 029120 147 SGALFSWSKPLLVISGINRGSSCGHH-MCCCRSQRGINLWCTFSVHIPKLE 196 (198)
Q Consensus 147 ~~~l~~~~~PDLVISGIN~G~N~G~~-v~ySGTVgAA~EAa~~G~~iPAIa 196 (198)
+++ +.+|||||||||+|.|+|.+ ++||||||||+||+++| |||||
T Consensus 79 ~~l---~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~G--iPaIA 124 (280)
T 1l5x_A 79 FGL---GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLG--IPALA 124 (280)
T ss_dssp HHH---TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTT--CCEEE
T ss_pred hcC---CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcC--CCeEE
Confidence 986 36899999999999999999 99999999999999986 89997
No 6
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=100.00 E-value=4.3e-51 Score=355.22 Aligned_cols=122 Identities=29% Similarity=0.486 Sum_probs=114.4
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEc-CchHHHHHH
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSL 144 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~-GTPaDCV~l 144 (198)
.|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||+++++. ...|+|+ |||+|||++
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~L~~~g--~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~---~~~~~v~~GTPaDCV~l 75 (254)
T 2v4n_A 1 SMRILLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTFTFD---NGDIAVQMGTPTDCVYL 75 (254)
T ss_dssp CCEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCEEEECT---TSCEEEETCCHHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEeeCCCCcCccCCcCCCCCeEEEEeC---CCCeEECCCCHHHHHHH
Confidence 4899999999999999999999999875 999999999999999999999999998873 3469999 999999999
Q ss_pred HHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120 145 ALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE 196 (198)
Q Consensus 145 aL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa 196 (198)
||+++| +.+|||||||||+|.|+|.+++||||||||+||+++| |||||
T Consensus 76 al~~ll--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA 123 (254)
T 2v4n_A 76 GVNALM--RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLG--FPALA 123 (254)
T ss_dssp HHHTTS--SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSS--SCEEE
T ss_pred HHhhcc--CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcC--CCeEE
Confidence 999976 4689999999999999999999999999999999986 89997
No 7
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=100.00 E-value=2.9e-51 Score=358.22 Aligned_cols=127 Identities=31% Similarity=0.473 Sum_probs=113.5
Q ss_pred CCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHH
Q 029120 61 NVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVD 140 (198)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaD 140 (198)
....++|||||||||||+||||++|+++|++ + |+|+||||+++|||+||++|+++||++++++ ..+|+|+|||+|
T Consensus 6 ~~~~~~m~ILlTNDDGi~apGi~aL~~~l~~-~-~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~---~~~~~v~GTPaD 80 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGVYAKGLAILAKTLAD-L-GEVDVVAPDRNRSGASNSLTLNAPLHIKNLE---NGMISVEGTPTD 80 (261)
T ss_dssp -----CCEEEEECSSCTTCHHHHHHHHHHTT-T-SEEEEEEESSCCTTCTTCCCCSSCEEEEECT---TSCEEESSCHHH
T ss_pred hccCCCCeEEEEcCCCCCCHHHHHHHHHHHh-c-CCEEEEecCCCCcCcccceecCCCeEEEEec---CCeEEECCCHHH
Confidence 3455669999999999999999999999998 3 6999999999999999999999999999864 346999999999
Q ss_pred HHHHHHhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcCCCCCccc
Q 029120 141 CVSLALSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFSVHIPKLE 196 (198)
Q Consensus 141 CV~laL~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G~~iPAIa 196 (198)
||++||++++ ..+|||||||||+|.|+|.+++||||||||+||+++| |||||
T Consensus 81 CV~lal~~l~--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~G--iPaIA 132 (261)
T 3ty2_A 81 CVHLAITGVL--PEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLG--LPALA 132 (261)
T ss_dssp HHHHHTTTTS--SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTS--CCEEE
T ss_pred HHHHHHHHhc--CCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcC--CCeEE
Confidence 9999999876 3689999999999999999999999999999999986 89997
No 8
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.87 E-value=0.16 Score=42.53 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=31.1
Q ss_pred CCCeEEEecCCCCC--Cc----cHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 65 SKPVLLVTNGDGIE--SP----GLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 65 ~~~~ILlTNDDGi~--sp----GI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
++||||+..+.-.- .- -+..|+++|.+.| |+|+|++|....
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~ 47 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGR 47 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTC
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCC
Confidence 46999998765332 12 3677999999999 999999987654
No 9
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=89.17 E-value=0.24 Score=42.08 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=28.9
Q ss_pred CCCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEec
Q 029120 61 NVDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 61 ~~~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP 102 (198)
+.+.+.||||++...|. +--....|+++|++.| |+|.|+++
T Consensus 15 ~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~ 56 (398)
T 3oti_A 15 HIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAG-HDVLIAVA 56 (398)
T ss_dssp ----CCCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEES
T ss_pred chhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCC-CEEEEecc
Confidence 44566799999976432 1223578999999999 99999998
No 10
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=88.67 E-value=0.45 Score=39.87 Aligned_cols=47 Identities=26% Similarity=0.160 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCeEEEecCCCC--CCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 57 DSTENVDSSKPVLLVTNGDGI--ESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 57 ~~~~~~~~~~~~ILlTNDDGi--~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
-.+++.-.+.||||++.=-+. -.| +.+|+++|++.| |+|+++.+...
T Consensus 13 ~g~~~~~~~~MRIL~~~~p~~GHv~P-~l~LA~~L~~rG-h~Vt~~t~~~~ 61 (400)
T 4amg_A 13 LGTENLYFQSMRALFITSPGLSHILP-TVPLAQALRALG-HEVRYATGGDI 61 (400)
T ss_dssp --------CCCEEEEECCSSHHHHGG-GHHHHHHHHHTT-CEEEEEECSST
T ss_pred CCcccCCCCCCeEEEECCCchhHHHH-HHHHHHHHHHCC-CEEEEEeCcch
Confidence 345566778899999853221 112 557999999999 99999987653
No 11
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=87.32 E-value=0.42 Score=39.27 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=29.9
Q ss_pred CCCCeEEEecCC---------------CC--CCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 64 SSKPVLLVTNGD---------------GI--ESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 64 ~~~~~ILlTNDD---------------Gi--~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
|++||||+.+.. .+ ...-+..|+++|.+.| |+|+|+.+....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~ 59 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSP 59 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSC
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCC
Confidence 346899998876 11 1123677899999999 899999987644
No 12
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=85.32 E-value=0.52 Score=39.91 Aligned_cols=40 Identities=33% Similarity=0.185 Sum_probs=27.7
Q ss_pred CCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 63 DSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
...+||||++..-+. +.-.+..|+++|++.| |+|.|+++.
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G-heV~v~~~~ 52 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAG-HEVLVAASE 52 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEEEG
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCC-CEEEEEcCH
Confidence 456699998864321 1123568999999999 999999974
No 13
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=82.69 E-value=0.87 Score=38.29 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=28.4
Q ss_pred CCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 62 VDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.+..+||||++.-.+. +.-.+..|+++|++.| |+|.|+.+.
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~G-heV~v~~~~ 57 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAG-HEVTFATGE 57 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEECG
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHCC-CEEEEEccH
Confidence 3566799998872221 1122458999999999 899999875
No 14
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=78.63 E-value=1.2 Score=37.41 Aligned_cols=37 Identities=27% Similarity=0.152 Sum_probs=26.9
Q ss_pred CCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 66 KPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 66 ~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
+||||++-.-+. +--....|+++|++.| |+|.|+++.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~G-heV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASG-HEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTT-CEEEEEECH
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCC-CEEEEecCh
Confidence 489988765321 2223578999999999 999999863
No 15
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=78.55 E-value=1.4 Score=37.21 Aligned_cols=45 Identities=20% Similarity=0.117 Sum_probs=28.4
Q ss_pred CCCCCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 59 TENVDSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
+++.+..+||||++.--|. +---...|+++|++.| |+|+++.+..
T Consensus 13 ~~~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~G-h~V~v~~~~~ 58 (415)
T 3rsc_A 13 GHIEGRHMAHLLIVNVASHGLILPTLTVVTELVRRG-HRVSYVTAGG 58 (415)
T ss_dssp ------CCCEEEEECCSCHHHHGGGHHHHHHHHHTT-CEEEEEECGG
T ss_pred CCcCcccCCEEEEEeCCCccccccHHHHHHHHHHCC-CEEEEEeCHH
Confidence 3444566689999874321 1122567999999999 8999999643
No 16
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=77.78 E-value=1.9 Score=36.07 Aligned_cols=43 Identities=9% Similarity=0.242 Sum_probs=33.0
Q ss_pred CCCCCeEEEecC----------CCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 63 DSSKPVLLVTNG----------DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 63 ~~~~~~ILlTND----------DGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
.|++.-|+|||- +|++..=+..-++.|+++| ++|.++.|....
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~iaS~~g~~ 54 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHG-FEVDFVSETGGF 54 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTT-CEEEEEESSSCC
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence 466667888872 4666666777899999999 799999998655
No 17
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=77.34 E-value=1.7 Score=37.93 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=30.0
Q ss_pred CCeEEEecCCCCC------------Ccc----HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 66 KPVLLVTNGDGIE------------SPG----LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 66 ~~~ILlTNDDGi~------------spG----I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
+||||+.++..+- .-| +..|+++|.+.| |+|+|+++...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 61 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG-VQVDIITRRIK 61 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC-CeEEEEeCCCC
Confidence 4899999986532 122 577899999999 89999998653
No 18
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=77.24 E-value=2.2 Score=35.78 Aligned_cols=42 Identities=21% Similarity=0.325 Sum_probs=32.7
Q ss_pred CCCCeEEEecC------C----CCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 64 SSKPVLLVTNG------D----GIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 64 ~~~~~ILlTND------D----Gi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
|++.-|+|||- | |++..=+..-++.|+++| ++|.++.|...+
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~~aSp~g~~ 60 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAG-FEVDVASETGTF 60 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEEESSSCC
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 45566778882 2 666666778899999999 799999998765
No 19
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=75.24 E-value=4.4 Score=33.47 Aligned_cols=42 Identities=24% Similarity=0.227 Sum_probs=29.6
Q ss_pred CCCCeEEEecCCCCCC-----ccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 64 SSKPVLLVTNGDGIES-----PGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~s-----pGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
.++|+||+....-... .-+..|+++|.+.| |+|+|+.+....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~ 64 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG-HEVSVLAPASPH 64 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT-CEEEEEESCCTT
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCcc
Confidence 3568999988543222 23667899999999 899999987654
No 20
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=74.87 E-value=2.8 Score=35.36 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=30.1
Q ss_pred CCCCCeEEEecCCCCC--------Ccc----HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 63 DSSKPVLLVTNGDGIE--------SPG----LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~--------spG----I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
..+.||||+..++-.- .-| +..|+++|.+.| |+|+|+++...
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 70 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG-IEVDIYTRATR 70 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence 3556899999976432 123 578889999999 89999998753
No 21
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=74.30 E-value=3 Score=36.08 Aligned_cols=41 Identities=24% Similarity=0.185 Sum_probs=27.7
Q ss_pred CCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 63 DSSKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
....||||++.--+. +---+.+|+++|++.| |+|.++.+..
T Consensus 17 ~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~G-heV~~~~~~~ 58 (441)
T 2yjn_A 17 RGSHMRVVFSSMASKSHLFGLVPLAWAFRAAG-HEVRVVASPA 58 (441)
T ss_dssp --CCCEEEEECCSCHHHHTTTHHHHHHHHHTT-CEEEEEECGG
T ss_pred cCCccEEEEEcCCCcchHhHHHHHHHHHHHCC-CeEEEEeCch
Confidence 345589999933211 1122567899999999 9999999865
No 22
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=74.07 E-value=2.3 Score=35.34 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=27.0
Q ss_pred CCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 66 KPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 66 ~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.+|||++.--|. +.--+..|+++|++.| |+|.++++.
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~~ 41 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRG-HRITYVTTP 41 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCC-CEEEEEcCH
Confidence 358998864321 2223678999999999 899999974
No 23
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=71.41 E-value=2.3 Score=36.71 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=28.0
Q ss_pred CeEEEecCCCCC---C----ccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGIE---S----PGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi~---s----pGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
||||+..+.-.- . .-+..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC-CeEEEEeccc
Confidence 789888775421 2 23567889999999 8999999864
No 24
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=70.65 E-value=2.6 Score=36.38 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=27.6
Q ss_pred CeEEEecCCCC---CCcc----HHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGI---ESPG----LVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi---~spG----I~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
|+||+..+.-. ..-| +..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG-VDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT-CEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC-CEEEEEecCc
Confidence 78888876432 1223 567899999999 8999999864
No 25
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=69.66 E-value=5 Score=34.15 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=29.2
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
+.+||||+.. +.+.| +..|+++|++.| |+|+++++...+
T Consensus 10 m~~~~Il~~~---~~~~GHv~p~l~la~~L~~~G-h~V~~~~~~~~~ 52 (424)
T 2iya_A 10 VTPRHISFFN---IPGHGHVNPSLGIVQELVARG-HRVSYAITDEFA 52 (424)
T ss_dssp -CCCEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGGH
T ss_pred cccceEEEEe---CCCCcccchHHHHHHHHHHCC-CeEEEEeCHHHH
Confidence 4457999984 33444 567999999999 899999987653
No 26
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=69.58 E-value=8.2 Score=32.37 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=29.4
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
+++|+||+.++.. ..-| +..|+++|.+.| |+|.|+.....
T Consensus 38 ~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G-~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG-IEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT-CEEEEEECCCC
T ss_pred hhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC-CeEEEEEccCC
Confidence 5679999887763 3334 446889999999 89998877543
No 27
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=69.28 E-value=1.9 Score=37.05 Aligned_cols=37 Identities=24% Similarity=0.359 Sum_probs=26.5
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
||||++-+... +.-.+.+|+++|++.| |+|.|++|..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~G-h~V~v~~~~~ 38 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELG-ADARMCLPPD 38 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTT-CCEEEEECGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 67877754321 2233778999999999 9999999854
No 28
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=68.70 E-value=3.2 Score=31.15 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=24.1
Q ss_pred CCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcE
Q 029120 61 NVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNV 97 (198)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV 97 (198)
+|..+++||||.-||-.....| .+.|.+.| |+|
T Consensus 3 ~m~~r~~rILiVdD~~~~~~~l---~~~L~~~G-~~v 35 (123)
T 2lpm_A 3 HMTERRLRVLVVEDESMIAMLI---EDTLCELG-HEV 35 (123)
T ss_dssp CCCCCCCCEEEESSSTTTSHHH---HHHHHHHC-CCC
T ss_pred CCCCCCCEEEEEeCCHHHHHHH---HHHHHHCC-CEE
Confidence 6778899999999987665544 44566778 555
No 29
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=68.65 E-value=4.2 Score=33.15 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=26.7
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
|+||+..+.-...-| +..|+++|.+.| |+|+|+.+..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG-HHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT-CCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC-CeEEEEecCC
Confidence 678877665322223 678999999999 8999999863
No 30
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=68.49 E-value=8.2 Score=30.85 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=32.3
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
+.-+|||. ||++.+=+ +.++++.|++.|...|++++|-...
T Consensus 119 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~ 160 (208)
T 1wd5_A 119 KGRDVVLV-DDGVATGASMEAALSVVFQEGPRRVVVAVPVASP 160 (208)
T ss_dssp TTSEEEEE-CSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH
T ss_pred CCCEEEEE-CCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH
Confidence 44578888 99998633 7788899999997789999986654
No 31
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=68.22 E-value=4.5 Score=34.48 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=26.0
Q ss_pred CCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 75 DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 75 DGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
+|++-.-+...++.|+++| ++|.++.|....
T Consensus 71 ~G~~~~E~~~p~~vL~~ag-~~v~i~S~~g~~ 101 (291)
T 1n57_A 71 TGNHPIETLLPLYHLHAAG-FEFEVATISGLM 101 (291)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CCEEEEESSSCC
T ss_pred CCCcHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 4777777888899999999 799999998654
No 32
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=67.86 E-value=5.1 Score=32.81 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=26.1
Q ss_pred CCeEEEecCCCCCCccH----HHHHHHHHhcCCCcEEEEecCC
Q 029120 66 KPVLLVTNGDGIESPGL----VYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI----~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
.|+||+.. .|. -|. ..|+++|.+.| |+|+|+.+..
T Consensus 6 ~mkIl~~~-~~~--gG~~~~~~~la~~L~~~G-~~V~v~~~~~ 44 (364)
T 1f0k_A 6 GKRLMVMA-GGT--GGHVFPGLAVAHHLMAQG-WQVRWLGTAD 44 (364)
T ss_dssp -CEEEEEC-CSS--HHHHHHHHHHHHHHHTTT-CEEEEEECTT
T ss_pred CcEEEEEe-CCC--ccchhHHHHHHHHHHHcC-CEEEEEecCC
Confidence 38999886 233 243 27899999999 8999999865
No 33
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=66.38 E-value=4.3 Score=33.21 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=31.6
Q ss_pred CCCCeEEEec------C----CCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 64 SSKPVLLVTN------G----DGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 64 ~~~~~ILlTN------D----DGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
|++.-|+||+ | +|+.-.-+...++.|+++| ++|.++.|...
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag-~~v~~~s~~g~ 53 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEG-FEVDFVSETGK 53 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEECSSSC
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCC-CEEEEECCCCC
Confidence 4455566775 2 6777677888899999999 79999999865
No 34
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=66.34 E-value=3 Score=32.50 Aligned_cols=34 Identities=21% Similarity=0.396 Sum_probs=29.6
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
-|||. ||++...+...++.|+++| ++|.++.|..
T Consensus 9 ~ill~--~g~~~~e~~~~~~~l~~ag-~~v~~~s~~~ 42 (190)
T 4e08_A 9 LVILA--PGAEEMEFIIAADVLRRAG-IKVTVAGLNG 42 (190)
T ss_dssp EEEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred EEEEC--CCchHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 35555 8999999999999999999 7999999986
No 35
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=63.18 E-value=8.4 Score=35.26 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=28.7
Q ss_pred CCCCCCeEEEecCC-C--CCCcc----HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 62 VDSSKPVLLVTNGD-G--IESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 62 ~~~~~~~ILlTNDD-G--i~spG----I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
....+||||..--- - +.+=| ..+|.++|.+.| |+|.|+.|.-.
T Consensus 5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G-~~V~Vi~P~Y~ 54 (536)
T 3vue_A 5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANG-HRVMVISPRYD 54 (536)
T ss_dssp ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCS
T ss_pred cCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcC-CeEEEEecCch
Confidence 34577999987321 0 01223 368999999999 99999999754
No 36
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=62.03 E-value=8 Score=30.91 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=30.3
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHH--------hcCCCcEEEEecCCC
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALV--------REGLYNVHVCAPQSD 105 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~--------~~G~~dV~VvAP~~~ 105 (198)
.|++.-||+. ||++.--+...++.|+ +.+ ++|.+++|...
T Consensus 4 ~m~~v~ill~--~g~~~~e~~~~~~~l~~a~~~~~~~~~-~~v~~vs~~~~ 51 (212)
T 3efe_A 4 QTKKAFLYVF--NTMSDWEYGYLIAELNSGRYFKKDLAP-LKVITVGANKE 51 (212)
T ss_dssp -CCCEEEEEC--TTCCTTTTHHHHHHHHHCTTSCTTCCC-CCEEEEESSSC
T ss_pred cccEEEEEEC--CCccHHHHHHHHHHHHhhhccccCCCC-eEEEEEECCCC
Confidence 3444445554 7898888999999999 666 79999999865
No 37
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=61.52 E-value=3.8 Score=31.06 Aligned_cols=39 Identities=28% Similarity=0.385 Sum_probs=32.2
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
.++|++-=-||++..-+...++.|+++| ++|.+++|...
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 40 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEG-HEVYVASFQRG 40 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESSSE
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCC-CEEEEEECCCC
Confidence 4566555568999999999999999999 79999999753
No 38
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=60.76 E-value=6.5 Score=33.52 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=26.1
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
||||++ +..+.| ..+|+++|++.| |+|+++.+..
T Consensus 1 MrIl~~---~~~~~GH~~p~l~la~~L~~~G-h~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLS---VCGTRGDVEIGVALADRLKALG-VQTRMCAPPA 38 (416)
T ss_dssp CEEEEE---EESCHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CeEEEE---ecCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 678887 233444 567899999999 9999999865
No 39
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=60.18 E-value=14 Score=28.82 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=32.0
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
++|+|-=-||++...+...++.|+++| ++|.+++|....
T Consensus 24 ~kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 62 (193)
T 1oi4_A 24 KKIAVLITDEFEDSEFTSPADEFRKAG-HEVITIEKQAGK 62 (193)
T ss_dssp CEEEEECCTTBCTHHHHHHHHHHHHTT-CEEEEEESSTTC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECCCCc
Confidence 455555458999999999999999999 799999998754
No 40
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=58.85 E-value=10 Score=32.38 Aligned_cols=35 Identities=31% Similarity=0.426 Sum_probs=27.3
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 67 ~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
||||++- ..+.| ..+|+++|++.| |+|+++.+...
T Consensus 1 M~Il~~~---~~~~GHv~P~l~la~~L~~~G-h~V~~~~~~~~ 39 (415)
T 1iir_A 1 MRVLLAT---CGSRGDTEPLVALAVRVRDLG-ADVRMCAPPDC 39 (415)
T ss_dssp CEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEEc---CCCchhHHHHHHHHHHHHHCC-CeEEEEcCHHH
Confidence 6888883 33444 667899999999 99999998763
No 41
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=58.82 E-value=5.9 Score=33.04 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=26.3
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
||||+...-+. +---+.+|+++|++.| |+|.++.+..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~G-h~V~~~~~~~ 38 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAG-HQVVMAANQD 38 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCC-CEEEEEeCHH
Confidence 68999855321 1122467899999999 8999998764
No 42
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=58.52 E-value=3.6 Score=40.21 Aligned_cols=42 Identities=26% Similarity=0.165 Sum_probs=34.8
Q ss_pred CCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
++.++.-||++..||.+..-+..++++|+++| .+|.||+|..
T Consensus 527 l~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG-~~V~vVs~~~ 568 (688)
T 2iuf_A 527 LDGLKVGLLASVNKPASIAQGAKLQVALSSVG-VDVVVVAERX 568 (688)
T ss_dssp CTTCEEEEECCTTCHHHHHHHHHHHHHHGGGT-CEEEEEESSC
T ss_pred CCCCEEEEEecCCCCCcHHHHHHHHHHHHHCC-CEEEEEeccC
Confidence 44445557777779999999999999999999 7999999964
No 43
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=57.58 E-value=10 Score=26.66 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=19.9
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
.+++++|||..||-.. ...|.+.|.+.| ++|..
T Consensus 2 ~~~~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~~ 34 (140)
T 3h5i_A 2 SLKDKKILIVEDSKFQ---AKTIANILNKYG-YTVEI 34 (140)
T ss_dssp ----CEEEEECSCHHH---HHHHHHHHHHTT-CEEEE
T ss_pred CCCCcEEEEEeCCHHH---HHHHHHHHHHcC-CEEEE
Confidence 4567899999988543 344556677777 56653
No 44
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=57.36 E-value=11 Score=29.95 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=33.1
Q ss_pred CCCeEEEec-----C---CCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 65 SKPVLLVTN-----G---DGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 65 ~~~~ILlTN-----D---DGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
++.-||++| | ||+...-+...++.|+++| ++|.+++|....
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag-~~v~~vs~~~~~ 54 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG-YDVKVASIQGGE 54 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT-CEEEEEESSCBC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC-CeEEEECCCCCc
Confidence 345577774 1 8888888999999999999 799999998753
No 45
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=55.32 E-value=7.5 Score=32.95 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=27.0
Q ss_pred CCCeEEEecCCCC-CCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 65 SKPVLLVTNGDGI-ESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 65 ~~~~ILlTNDDGi-~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
.+|+||+..--+. +.--+..|+++|++.| |+|+++.+...
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G-~~V~~~~~~~~ 46 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARG-HRVTYAIPPVF 46 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTT-CEEEEEECGGG
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCC-CeEEEEeCHHH
Confidence 4579998753211 1122567999999999 89999998753
No 46
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=54.42 E-value=7.3 Score=30.04 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=32.2
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
+.++|+|-=-||++...+...++.|+++| ++|.+++|...
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 47 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAG-GTTELISLEPG 47 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 34555555458999889999999999998 79999999864
No 47
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=54.17 E-value=16 Score=24.93 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=21.7
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
.+++++|||..||-.. ...|.+.|...| ++|..
T Consensus 2 ~m~~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~~ 34 (132)
T 2rdm_A 2 SLEAVTILLADDEAIL---LLDFESTLTDAG-FLVTA 34 (132)
T ss_dssp CCSSCEEEEECSSHHH---HHHHHHHHHHTT-CEEEE
T ss_pred CCCCceEEEEcCcHHH---HHHHHHHHHHcC-CEEEE
Confidence 4667899999888433 344555666677 56654
No 48
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=53.27 E-value=8.6 Score=31.75 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=23.2
Q ss_pred CCCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 60 ENVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 60 ~~~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
|.|+|..++||||= -.+.-..|.+.|++.| ++|+.
T Consensus 8 ~~~~~~g~~IlvTR----p~~~a~~l~~~L~~~G-~~~~~ 42 (269)
T 3re1_A 8 HSMDMSAWRLLLTR----PAEESAALARVLADAG-IFSSS 42 (269)
T ss_dssp -----CCCEEEECS----CHHHHHHHHHHHHTTT-CEEEE
T ss_pred cccccCCCEEEEeC----ChHHHHHHHHHHHHCC-CCEEE
Confidence 56899999999993 3455678999999999 56543
No 49
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=52.83 E-value=11 Score=28.61 Aligned_cols=35 Identities=29% Similarity=0.211 Sum_probs=26.9
Q ss_pred CCCCeEEEecCCCCCCcc--HHHHHHHHHhcCCCcEEEEe
Q 029120 64 SSKPVLLVTNGDGIESPG--LVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG--I~aL~~aL~~~G~~dV~VvA 101 (198)
..+.-|||| ||....+ +...++.|++.| ..|+++.
T Consensus 122 ~~~~iillT--DG~~~~~~~~~~~~~~l~~~g-i~v~~ig 158 (178)
T 2xgg_A 122 VPKLVIGMT--DGESDSDFRTVRAAKEIRELG-GIVTVLA 158 (178)
T ss_dssp SCEEEEEEE--SSCCCHHHHHSHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEEEc--CCCCCCCccHHHHHHHHHHCC-CEEEEEE
Confidence 445668899 7887777 888889999988 4777763
No 50
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=51.69 E-value=22 Score=28.46 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCCCccH--HHHHHHHHhcCCCcEEEEecCCC
Q 029120 65 SKPVLLVTNGDGIESPGL--VYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI--~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
+.|+|||| | + |. +.|++.|.+.| ++|+++.-...
T Consensus 2 ~~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIA---G--C-GDLGLELARRLTAQG-HEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEE---C--C-SHHHHHHHHHHHHTT-CCEEEEECTTS
T ss_pred CCCcEEEE---C--C-CHHHHHHHHHHHHCC-CEEEEEeCCcc
Confidence 45789999 6 3 43 46788898888 79998876543
No 51
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=51.64 E-value=15 Score=27.53 Aligned_cols=35 Identities=14% Similarity=0.032 Sum_probs=21.6
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEe
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvA 101 (198)
-++.+||||.-||- .-...|.+.|.+.| ++++.+|
T Consensus 9 m~k~~rILiVDD~~---~~r~~l~~~L~~~G-~~~v~~a 43 (134)
T 3to5_A 9 LNKNMKILIVDDFS---TMRRIVKNLLRDLG-FNNTQEA 43 (134)
T ss_dssp CCTTCCEEEECSCH---HHHHHHHHHHHHTT-CCCEEEE
T ss_pred hCCCCEEEEEeCCH---HHHHHHHHHHHHcC-CcEEEEE
Confidence 35678999997762 23344556777888 4443333
No 52
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=50.10 E-value=34 Score=33.43 Aligned_cols=41 Identities=22% Similarity=0.136 Sum_probs=31.9
Q ss_pred CCCCCCeEEEecCCC-CCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 62 VDSSKPVLLVTNGDG-IESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 62 ~~~~~~~ILlTNDDG-i~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
...++.-||++ || .+..-+..++++|+++| .+|.||+|...
T Consensus 535 l~grKVaILva--dG~fE~~El~~p~~aL~~aG-a~V~vVsp~~g 576 (688)
T 3ej6_A 535 IATLRVGVLST--TKGGSLDKAKALKEQLEKDG-LKVTVIAEYLA 576 (688)
T ss_dssp CTTCEEEEECC--SSSSHHHHHHHHHHHHHHTT-CEEEEEESSCC
T ss_pred ccCCEEEEEcc--CCCccHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 44455556666 56 66668899999999999 79999999865
No 53
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=49.88 E-value=69 Score=25.29 Aligned_cols=77 Identities=14% Similarity=0.034 Sum_probs=44.4
Q ss_pred CCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHH
Q 029120 62 VDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVD 140 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaD 140 (198)
|+.+..+||||=- +-|| +++++.|.+.| ++|+++.-..+... .+...+.+|=+=.+
T Consensus 3 m~l~~k~vlVTGa----s~giG~~ia~~l~~~G-~~V~~~~r~~~~~~------------------~~~~~~~~D~~d~~ 59 (250)
T 2fwm_X 3 MDFSGKNVWVTGA----GKGIGYATALAFVEAG-AKVTGFDQAFTQEQ------------------YPFATEVMDVADAA 59 (250)
T ss_dssp CCCTTCEEEEEST----TSHHHHHHHHHHHHTT-CEEEEEESCCCSSC------------------CSSEEEECCTTCHH
T ss_pred CCCCCCEEEEeCC----CcHHHHHHHHHHHHCC-CEEEEEeCchhhhc------------------CCceEEEcCCCCHH
Confidence 4455678999932 2355 57889999999 78988865433100 01223344544444
Q ss_pred HHHHHHhcccCCCCCCcEEEe
Q 029120 141 CVSLALSGALFSWSKPLLVIS 161 (198)
Q Consensus 141 CV~laL~~~l~~~~~PDLVIS 161 (198)
.+.-.+..+.....++|.||.
T Consensus 60 ~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 60 QVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp HHHHHHHHHHHHCSCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEE
Confidence 555555543222347999985
No 54
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=48.95 E-value=45 Score=26.83 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=42.6
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHHH
Q 029120 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCV 142 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDCV 142 (198)
.+..+||||=- +-|| +++++.|.+.| ++|+++.-..++ + .. ...+.+|=+=.+.+
T Consensus 6 l~~k~vlVTGa----s~gIG~~ia~~l~~~G-~~V~~~~r~~~~---~------~~----------~~~~~~Dl~~~~~v 61 (264)
T 2dtx_A 6 LRDKVVIVTGA----SMGIGRAIAERFVDEG-SKVIDLSIHDPG---E------AK----------YDHIECDVTNPDQV 61 (264)
T ss_dssp GTTCEEEEESC----SSHHHHHHHHHHHHTT-CEEEEEESSCCC---S------CS----------SEEEECCTTCHHHH
T ss_pred cCCCEEEEeCC----CCHHHHHHHHHHHHCC-CEEEEEecCccc---C------Cc----------eEEEEecCCCHHHH
Confidence 34567999932 2355 56888999999 789888755443 0 11 12234443434445
Q ss_pred HHHHhcccCCCCCCcEEEe
Q 029120 143 SLALSGALFSWSKPLLVIS 161 (198)
Q Consensus 143 ~laL~~~l~~~~~PDLVIS 161 (198)
.-.+..+.....++|.||.
T Consensus 62 ~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 62 KASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp HHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEE
Confidence 5445443211247999985
No 55
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=46.25 E-value=22 Score=27.99 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=31.8
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
.|+|.-|||. ||++.-=+...++.|+++| ++|.++.+...+
T Consensus 3 ~M~kV~ill~--dGfe~~E~~~p~~vl~~ag-~~v~~~s~~~~~ 43 (194)
T 4gdh_A 3 HMVKVCLFVA--DGTDEIEFSAPWGIFKRAE-IPIDSVYVGENK 43 (194)
T ss_dssp --CCEEEEEE--TTCCHHHHHHHHHHHHHTT-CCEEEEEESSCT
T ss_pred CCCEEEEEEC--CCcCHHHHHHHHHHHHHCC-CeEEEEEEcCCC
Confidence 4666678887 7998777788899999999 699999887654
No 56
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=45.46 E-value=39 Score=27.69 Aligned_cols=36 Identities=31% Similarity=0.303 Sum_probs=25.1
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhc-CCCcEEEEecCC
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVRE-GLYNVHVCAPQS 104 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~-G~~dV~VvAP~~ 104 (198)
|++|+|||++-.+. ..|+++|++. |.++|+++-+..
T Consensus 2 m~~~~Ili~g~g~~-----~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-----AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC-----HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch-----HHHHHHHHHhcCCCEEEEEeCCC
Confidence 56789999965543 4688888887 326777775543
No 57
>2cve_A Hypothetical protein TTHA1053; COG1739, UPF0029, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: TLA; 1.60A {Thermus thermophilus} SCOP: d.14.1.11 d.58.11.2
Probab=45.45 E-value=17 Score=30.09 Aligned_cols=30 Identities=33% Similarity=0.344 Sum_probs=24.5
Q ss_pred EecCCCCCC--ccHHHHHHHHHhcCCCcEEEEe
Q 029120 71 VTNGDGIES--PGLVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 71 lTNDDGi~s--pGI~aL~~aL~~~G~~dV~VvA 101 (198)
=.||||--+ .|...| +.|...+..+|.||.
T Consensus 59 ~~~DDGEp~GTAG~piL-~~L~~~~l~nv~vVV 90 (191)
T 2cve_A 59 RFSDDGEPSGTAGRPIL-HAIEAQGLDRVAVLV 90 (191)
T ss_dssp EEECTTSSTTSSHHHHH-HHHHHTTBCSEEEEE
T ss_pred ccCCCCCcCCcChHHHH-HHHHHcCCCcEEEEE
Confidence 469999877 998876 789988888887775
No 58
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=45.41 E-value=4.7 Score=32.00 Aligned_cols=41 Identities=15% Similarity=0.263 Sum_probs=30.9
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
..+-+|+|-=.||++.-=+..-++.|+++| ++|.++.|...
T Consensus 6 ~t~~~v~il~~~gFe~~E~~~p~~~l~~ag-~~V~~~s~~~~ 46 (177)
T 4hcj_A 6 KTNNILYVMSGQNFQDEEYFESKKIFESAG-YKTKVSSTFIG 46 (177)
T ss_dssp CCCEEEEECCSEEECHHHHHHHHHHHHHTT-CEEEEEESSSE
T ss_pred cCCCEEEEECCCCccHHHHHHHHHHHHHCC-CEEEEEECCCC
Confidence 333345554567888777788899999999 79999998764
No 59
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=45.16 E-value=17 Score=24.75 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=19.3
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.+++|||..||-.. ...|.+.|.+.| ++|.
T Consensus 2 ~~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~ 31 (127)
T 3i42_A 2 SLQQALIVEDYQAA---AETFKELLEMLG-FQAD 31 (127)
T ss_dssp CCEEEEEECSCHHH---HHHHHHHHHHTT-EEEE
T ss_pred CcceEEEEcCCHHH---HHHHHHHHHHcC-CCEE
Confidence 45789999888443 344555676767 4544
No 60
>1vi7_A Hypothetical protein YIGZ; structural genomics, unknown function; 2.80A {Escherichia coli} SCOP: d.14.1.11 d.58.11.2
Probab=45.04 E-value=17 Score=30.69 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=24.9
Q ss_pred ecCCCCCC--ccHHHHHHHHHhcCCCcEEEEec
Q 029120 72 TNGDGIES--PGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 72 TNDDGi~s--pGI~aL~~aL~~~G~~dV~VvAP 102 (198)
.||||--+ .|...| +.|...+..+|.||.=
T Consensus 72 ~sDDGEp~GTAG~piL-~~L~~~~l~nv~vVVt 103 (217)
T 1vi7_A 72 FSDDGEPAGTAGKPML-AQLMGSGVGEITAVVV 103 (217)
T ss_dssp EECTTSCTTSSSHHHH-HHHHHHTCCSEEEECC
T ss_pred cCCCCCCCCcchHHHH-HHHHHcCCCCEEEEEE
Confidence 69999877 998876 7898888889888764
No 61
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=44.18 E-value=25 Score=28.72 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=26.9
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
+|+|||.... --+.+++++++.| ++|+++.|..+
T Consensus 2 ~m~Ililg~g-----~~~~l~~a~~~~G-~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH-----SALQILKGAKDEG-FETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST-----THHHHHHHHHHTT-CCEEEESCGGG
T ss_pred ceEEEEECCh-----hHHHHHHHHHhCC-CEEEEEECCCC
Confidence 4789999764 3456889999999 79999988754
No 62
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=43.90 E-value=25 Score=24.46 Aligned_cols=31 Identities=23% Similarity=0.175 Sum_probs=19.0
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
|.+++|||..||-.. ...|.+.|.+.| ++|.
T Consensus 1 M~~~~ilivdd~~~~---~~~l~~~l~~~g-~~v~ 31 (143)
T 3jte_A 1 MSLAKILVIDDESTI---LQNIKFLLEIDG-NEVL 31 (143)
T ss_dssp --CCEEEEECSCHHH---HHHHHHHHHHTT-CEEE
T ss_pred CCCCEEEEEcCCHHH---HHHHHHHHHhCC-ceEE
Confidence 346799999888443 344555666667 4554
No 63
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=43.75 E-value=28 Score=27.62 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCCccH--HHHHHHHHhcCCCcEEEEecC
Q 029120 66 KPVLLVTNGDGIESPGL--VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI--~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.|+|||| | + |. +.|+++|.+.| |+|+++.-.
T Consensus 5 ~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSF---G--H-GYTARVLSRALAPQG-WRIIGTSRN 37 (286)
T ss_dssp CCEEEEE---T--C-CHHHHHHHHHHGGGT-CEEEEEESC
T ss_pred cCcEEEE---C--C-cHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 4789999 5 4 44 46788998888 789888654
No 64
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=43.12 E-value=6.4 Score=32.20 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=24.1
Q ss_pred CCCCeEEEecCC-CCCCcc----HHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 64 SSKPVLLVTNGD-GIESPG----LVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 64 ~~~~~ILlTNDD-Gi~spG----I~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
+++|+||+..+. ....-| +..|+++| .| |+|.|+++....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~~ 46 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQNA 46 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSSH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCCc
Confidence 356888887653 212234 44455555 36 899999998753
No 65
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=42.15 E-value=87 Score=30.53 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=31.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
++|+|-=-||++..-+..++++|+.+| ++|.+|+|...
T Consensus 535 rkVaILl~dGfe~~El~~p~dvL~~AG-~~V~ivS~~gg 572 (715)
T 1sy7_A 535 RRVAIIIADGYDNVAYDAAYAAISANQ-AIPLVIGPRRS 572 (715)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESCSS
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHhcC-CEEEEEECCCC
Confidence 444444348999999999999999999 79999999864
No 66
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=41.87 E-value=16 Score=31.40 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=24.0
Q ss_pred CCCCCCCCCeEEEecCC----CCCCccHHHHHHHHHhcCCCcEEEE
Q 029120 59 TENVDSSKPVLLVTNGD----GIESPGLVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 59 ~~~~~~~~~~ILlTNDD----Gi~spGI~aL~~aL~~~G~~dV~Vv 100 (198)
+++.-++.|+|||.|-. +....=...+++.|++.| |+|.|+
T Consensus 15 t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G-~eV~v~ 59 (280)
T 4gi5_A 15 TENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAG-HEVQVS 59 (280)
T ss_dssp -------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 44567888999999754 111222456778888888 899886
No 67
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=41.76 E-value=6.5 Score=34.44 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=28.7
Q ss_pred CCCCCeEEEecCCCC---CCcc---HHHHHHHHHhcCCCcEEEEecCC
Q 029120 63 DSSKPVLLVTNGDGI---ESPG---LVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi---~spG---I~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
..++|||++.-+.=. ..-| +..|+++|.+.| |+|.|++|..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G-heV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK-FKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT-CEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC-CceEEEEecC
Confidence 457799987765311 0112 567778888889 9999999974
No 68
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=41.66 E-value=31 Score=25.86 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=26.9
Q ss_pred CCCeEEEec--CCCCCCccHHHHHHHHHhcCCCcEEEE
Q 029120 65 SKPVLLVTN--GDGIESPGLVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 65 ~~~~ILlTN--DDGi~spGI~aL~~aL~~~G~~dV~Vv 100 (198)
++++|||.. .| ++.-|+.-+...|+..| ++|+-.
T Consensus 2 ~~~~vvla~~~~d-~HdiG~~~v~~~l~~~G-~~Vi~l 37 (137)
T 1ccw_A 2 EKKTIVLGVIGSD-CHAVGNKILDHAFTNAG-FNVVNI 37 (137)
T ss_dssp CCCEEEEEEETTC-CCCHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEEeCCCc-hhHHHHHHHHHHHHHCC-CEEEEC
Confidence 457788774 44 88899999999999999 688633
No 69
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=41.12 E-value=26 Score=25.15 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=20.3
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
...+++|||..||-... ..|.+.|.+.| ++|+
T Consensus 33 ~~~~~~Ilivdd~~~~~---~~l~~~L~~~g-~~v~ 64 (157)
T 3hzh_A 33 TGIPFNVLIVDDSVFTV---KQLTQIFTSEG-FNII 64 (157)
T ss_dssp TTEECEEEEECSCHHHH---HHHHHHHHHTT-CEEE
T ss_pred CCCceEEEEEeCCHHHH---HHHHHHHHhCC-CeEE
Confidence 34567999999885443 44455566666 4553
No 70
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=41.10 E-value=17 Score=29.26 Aligned_cols=41 Identities=24% Similarity=0.286 Sum_probs=31.7
Q ss_pred CCCCeEEEecC---CCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 64 SSKPVLLVTNG---DGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 64 ~~~~~ILlTND---DGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
|++.-||++|- ||+.-.-+...++.|+++| ++|.+++|...
T Consensus 6 m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag-~~v~~~s~~g~ 49 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSG-AQAVCFAPDKQ 49 (232)
T ss_dssp CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTT-CEEEEEECSSB
T ss_pred CCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 33444555542 6888888999999999999 79999999864
No 71
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=39.99 E-value=28 Score=24.92 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=19.8
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
..++++|||.-||-.. ...|.+.|.+.| ++|..
T Consensus 4 ~~~~~~ILivdd~~~~---~~~l~~~L~~~g-~~v~~ 36 (154)
T 3gt7_A 4 SNRAGEILIVEDSPTQ---AEHLKHILEETG-YQTEH 36 (154)
T ss_dssp ---CCEEEEECSCHHH---HHHHHHHHHTTT-CEEEE
T ss_pred ccCCCcEEEEeCCHHH---HHHHHHHHHHCC-CEEEE
Confidence 3567899999887433 344555666667 56643
No 72
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=39.86 E-value=27 Score=27.13 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=30.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
.-||+. ||++...+...++.|+++| ++|.+++|...
T Consensus 6 v~ill~--~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 41 (197)
T 2rk3_A 6 ALVILA--KGAEEMETVIPVDVMRRAG-IKVTVAGLAGK 41 (197)
T ss_dssp EEEEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEETTCS
T ss_pred EEEEEC--CCCcHHHHHHHHHHHHHCC-CEEEEEEcCCC
Confidence 335554 8999999999999999999 79999999764
No 73
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=38.49 E-value=32 Score=26.31 Aligned_cols=38 Identities=24% Similarity=0.366 Sum_probs=28.3
Q ss_pred CCCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCC
Q 029120 64 SSKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
..+.-|||| ||....+ +..+++.+++.| ..|+++.=..
T Consensus 111 ~~~~ivllT--DG~~~~~~~~~~~~~~~~~~-i~v~~igig~ 149 (218)
T 3ibs_A 111 VGRAIIVIT--DGENHEGGAVEAAKAAAEKG-IQVSVLGVGM 149 (218)
T ss_dssp CCEEEEEEE--CCTTCCSCHHHHHHHHHTTT-EEEEEEEESC
T ss_pred CCcEEEEEc--CCCCCCCcHHHHHHHHHhcC-CEEEEEEecC
Confidence 345668888 7877666 888889999888 5788776544
No 74
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=38.01 E-value=41 Score=23.81 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=20.2
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.++++|||..||-.. ...|.+.|.+.| ++|.
T Consensus 12 ~~~~~ILivdd~~~~---~~~l~~~L~~~g-~~v~ 42 (153)
T 3hv2_A 12 TRRPEILLVDSQEVI---LQRLQQLLSPLP-YTLH 42 (153)
T ss_dssp CSCCEEEEECSCHHH---HHHHHHHHTTSS-CEEE
T ss_pred cCCceEEEECCCHHH---HHHHHHHhcccC-cEEE
Confidence 456799999998543 344556666666 4554
No 75
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=37.56 E-value=20 Score=28.43 Aligned_cols=36 Identities=33% Similarity=0.492 Sum_probs=29.6
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
+|++-=-||++..-+...++.|+++| ++|.++.|..
T Consensus 11 ~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~g 46 (208)
T 3ot1_A 11 RILVPVAHGSEEMETVIIVDTLVRAG-FQVTMAAVGD 46 (208)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred eEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 44444348999999999999999999 7999999974
No 76
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=37.40 E-value=32 Score=23.62 Aligned_cols=30 Identities=13% Similarity=0.005 Sum_probs=19.1
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
+.++|||..||-.. ...|.+.|.+.| ++|.
T Consensus 2 ~~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~ 31 (140)
T 2qr3_A 2 SLGTIIIVDDNKGV---LTAVQLLLKNHF-SKVI 31 (140)
T ss_dssp CCCEEEEECSCHHH---HHHHHHHHTTTS-SEEE
T ss_pred CCceEEEEeCCHHH---HHHHHHHHHhCC-cEEE
Confidence 45789999888433 344555566666 4555
No 77
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=37.35 E-value=32 Score=29.76 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=31.5
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
.+|+|-=-||++..-+...++.|+++| ++|.+++|...+
T Consensus 206 ~ki~ill~dg~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 244 (396)
T 3uk7_A 206 KRILFLCGDYMEDYEVKVPFQSLQALG-CQVDAVCPEKKA 244 (396)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHHHT-CEEEEECTTCCT
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHCC-CEEEEECCCCCC
Confidence 344444448999888999999999999 799999998754
No 78
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=36.97 E-value=37 Score=26.12 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=28.5
Q ss_pred eEEEecCCCCCCccHHHHHHHHHh-cCCCcEEEEecCCC
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVR-EGLYNVHVCAPQSD 105 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~-~G~~dV~VvAP~~~ 105 (198)
+|+|-=-||++-.-+...++.|++ .| ++|.+++|...
T Consensus 3 ~i~ill~~g~~~~e~~~~~~~l~~a~~-~~v~~vs~~~~ 40 (188)
T 2fex_A 3 RIAIALAQDFADWEPALLAAAARSYLG-VEIVHATPDGM 40 (188)
T ss_dssp EEEEECCTTBCTTSSHHHHHHHHHHSC-CEEEEEETTSS
T ss_pred EEEEEeCCCchHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 344333478887778888999998 87 79999999864
No 79
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=36.77 E-value=30 Score=27.05 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCcc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qSg 108 (198)
+.-+|||. ||.+.+=+ +.++++.|++.|...|.++++-.-..+
T Consensus 97 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 140 (185)
T 2geb_A 97 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 140 (185)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCc
Confidence 44578888 99887644 778889999998778888887755444
No 80
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=36.68 E-value=40 Score=23.28 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=19.8
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
++++|||..||-... ..|.+.|.+.| ++|..
T Consensus 5 ~~~~iLivdd~~~~~---~~l~~~l~~~g-~~v~~ 35 (140)
T 3grc_A 5 PRPRILICEDDPDIA---RLLNLMLEKGG-FDSDM 35 (140)
T ss_dssp CCSEEEEECSCHHHH---HHHHHHHHHTT-CEEEE
T ss_pred CCCCEEEEcCCHHHH---HHHHHHHHHCC-CeEEE
Confidence 457999998885443 34455566667 55533
No 81
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=36.41 E-value=60 Score=27.31 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=28.4
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
...+++|||.+- |. --+.+++++++.| ++|+++-+..+.
T Consensus 8 ~~~~~~ili~g~-g~---~~~~~~~a~~~~G-~~v~~~~~~~~~ 46 (391)
T 1kjq_A 8 RPAATRVMLLGS-GE---LGKEVAIECQRLG-VEVIAVDRYADA 46 (391)
T ss_dssp STTCCEEEEESC-SH---HHHHHHHHHHTTT-CEEEEEESSTTC
T ss_pred CCCCCEEEEECC-CH---HHHHHHHHHHHcC-CEEEEEECCCCC
Confidence 345689999965 32 2356789999999 699998876543
No 82
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=36.39 E-value=48 Score=22.50 Aligned_cols=32 Identities=9% Similarity=0.031 Sum_probs=21.1
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
+.+++|||..||-.. ...|.+.|.+.| ++|+.
T Consensus 5 ~~~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~~ 36 (130)
T 3eod_A 5 LVGKQILIVEDEQVF---RSLLDSWFSSLG-ATTVL 36 (130)
T ss_dssp TTTCEEEEECSCHHH---HHHHHHHHHHTT-CEEEE
T ss_pred CCCCeEEEEeCCHHH---HHHHHHHHHhCC-ceEEE
Confidence 456799999888544 344555677777 56654
No 83
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=36.27 E-value=41 Score=23.15 Aligned_cols=33 Identities=12% Similarity=0.233 Sum_probs=20.5
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
.+++++|||.-||-.. ...|.+.|.+.| ++|..
T Consensus 4 ~~~~~~iLivdd~~~~---~~~l~~~L~~~g-~~v~~ 36 (142)
T 3cg4_A 4 AEHKGDVMIVDDDAHV---RIAVKTILSDAG-FHIIS 36 (142)
T ss_dssp --CCCEEEEECSCHHH---HHHHHHHHHHTT-CEEEE
T ss_pred CCCCCeEEEEcCCHHH---HHHHHHHHHHCC-eEEEE
Confidence 3466899999888433 344556677777 56643
No 84
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=36.02 E-value=35 Score=26.81 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=29.7
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
-||+. ||.+-..+...++.|+++| ++|.++.|...
T Consensus 6 ~ill~--~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 40 (205)
T 2ab0_A 6 LVCLA--PGSEETEAVTTIDLLVRGG-IKVTTASVASD 40 (205)
T ss_dssp EEEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEECSST
T ss_pred EEEEc--CCCcHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 35555 7998888999999999999 79999999875
No 85
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.88 E-value=47 Score=24.53 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.|+||||=--|. -| +.|++.|.+.| ++|+++...
T Consensus 3 ~~~ilVtGatG~--iG-~~l~~~l~~~g-~~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIFGATGQ--TG-LTTLAQAVQAG-YEVTVLVRD 36 (206)
T ss_dssp CCEEEEESTTSH--HH-HHHHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEEcCCcH--HH-HHHHHHHHHCC-CeEEEEEeC
Confidence 378999943332 22 45778888888 899888754
No 86
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=35.87 E-value=36 Score=23.77 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=22.6
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~Vv 100 (198)
..++.+|||..||-... ..|.+.|.+.|.++|+.+
T Consensus 17 ~~~~~~ilivdd~~~~~---~~l~~~L~~~g~~~v~~~ 51 (146)
T 4dad_A 17 FQGMINILVASEDASRL---AHLARLVGDAGRYRVTRT 51 (146)
T ss_dssp CGGGCEEEEECSCHHHH---HHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEeCCHHHH---HHHHHHHhhCCCeEEEEe
Confidence 45668999999885543 345556666663466543
No 87
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=35.64 E-value=42 Score=23.39 Aligned_cols=31 Identities=26% Similarity=0.314 Sum_probs=19.7
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
+++++|||.-||-.. ...|.+.|.+.| ++|.
T Consensus 2 m~~~~iLivdd~~~~---~~~l~~~L~~~g-~~v~ 32 (136)
T 3t6k_A 2 MKPHTLLIVDDDDTV---AEMLELVLRGAG-YEVR 32 (136)
T ss_dssp -CCCEEEEECSCHHH---HHHHHHHHHHTT-CEEE
T ss_pred CCCCEEEEEeCCHHH---HHHHHHHHHHCC-CEEE
Confidence 456789999888543 334455566667 5654
No 88
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=35.60 E-value=29 Score=24.59 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=17.3
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
..+.++|||..||-.. ...|.+.|.+.| ++|..
T Consensus 11 ~~~~~~iLivdd~~~~---~~~l~~~L~~~g-~~v~~ 43 (143)
T 3m6m_D 11 RVRSMRMLVADDHEAN---RMVLQRLLEKAG-HKVLC 43 (143)
T ss_dssp ----CEEEEECSSHHH---HHHHHHHHHC---CEEEE
T ss_pred ccccceEEEEeCCHHH---HHHHHHHHHHcC-CeEEE
Confidence 3566899999888443 334455566666 55543
No 89
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=35.57 E-value=42 Score=24.58 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=26.1
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.+.+|||. |...-| +.+++.|.+.| ++|+++.+.
T Consensus 2 ~~~~vlI~---G~G~vG-~~la~~L~~~g-~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVC---GHSILA-INTILQLNQRG-QNVTVISNL 35 (153)
T ss_dssp CCSCEEEE---CCSHHH-HHHHHHHHHTT-CCEEEEECC
T ss_pred CCCcEEEE---CCCHHH-HHHHHHHHHCC-CCEEEEECC
Confidence 45678888 665556 45778898888 899999885
No 90
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=35.40 E-value=1.3e+02 Score=22.37 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=22.2
Q ss_pred CCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecC
Q 029120 66 KPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~ 103 (198)
+|+||||=-- -|| +++++.|. .| ++|+++...
T Consensus 3 kM~vlVtGas----g~iG~~~~~~l~-~g-~~V~~~~r~ 35 (202)
T 3d7l_A 3 AMKILLIGAS----GTLGSAVKERLE-KK-AEVITAGRH 35 (202)
T ss_dssp SCEEEEETTT----SHHHHHHHHHHT-TT-SEEEEEESS
T ss_pred CcEEEEEcCC----cHHHHHHHHHHH-CC-CeEEEEecC
Confidence 4789999332 233 46788888 78 788887654
No 91
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=35.23 E-value=33 Score=26.51 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=25.6
Q ss_pred CCCCeEEEecCCCCCCcc--HHHHHHHHHhcCCCcEEEEec
Q 029120 64 SSKPVLLVTNGDGIESPG--LVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG--I~aL~~aL~~~G~~dV~VvAP 102 (198)
..+.-|||| ||....+ +...++.|++.| ..|+++.=
T Consensus 109 ~~~~iillT--DG~~~~~~~~~~~~~~~~~~g-i~i~~igi 146 (213)
T 1pt6_A 109 VKKVMVIVT--DGESHDNHRLKKVIQDCEDEN-IQRFSIAI 146 (213)
T ss_dssp CEEEEEEEE--SSCCSCSHHHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCeEEEEEc--CCCCCCCccHHHHHHHHHHCC-CEEEEEEe
Confidence 344568889 7776665 577788888888 47777754
No 92
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=34.79 E-value=32 Score=24.01 Aligned_cols=31 Identities=13% Similarity=0.191 Sum_probs=19.2
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.++++|||..||-.....| .+.|.+.| ++|.
T Consensus 6 ~~~~~iLivd~~~~~~~~l---~~~L~~~g-~~v~ 36 (147)
T 2zay_A 6 GKWWRIMLVDTQLPALAAS---ISALSQEG-FDII 36 (147)
T ss_dssp --CEEEEEECTTGGGGHHH---HHHHHHHT-EEEE
T ss_pred CCCceEEEEeCCHHHHHHH---HHHHHHcC-CeEE
Confidence 4568999999986554444 44555666 4555
No 93
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=34.73 E-value=37 Score=26.28 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=31.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qS 107 (198)
+.-+|||. ||.+.+-+ +.++.+.|++.|...|.+++.-..+.
T Consensus 94 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 94 EGRHVLVV-EDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 44578887 99888744 77888999999877888888655443
No 94
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=34.58 E-value=31 Score=27.92 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=31.5
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKS 107 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qS 107 (198)
+.-+|||. ||.+.+=+ ++++.+.|++.|...|.++++-..++
T Consensus 125 ~gk~VliV-DDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 125 TGKNVLIV-EDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp TTSEEEEE-EEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-eceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 34468887 99998744 77888999998877888888855444
No 95
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=34.33 E-value=35 Score=26.08 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCCcc--HHHHHHHHHhcCCCcEEEEec
Q 029120 65 SKPVLLVTNGDGIESPG--LVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG--I~aL~~aL~~~G~~dV~VvAP 102 (198)
.+.-|||| ||....+ +...++.|++.| ..|++++-
T Consensus 109 ~~~ivllT--DG~~~~~~~~~~~~~~~~~~g-i~i~~igv 145 (200)
T 1v7p_C 109 TKVMVVVT--DGESHDGSMLKAVIDQCNHDN-ILRFGIAV 145 (200)
T ss_dssp EEEEEEEE--SSCCSCGGGHHHHHHHHHHTT-EEEEEEEE
T ss_pred CeEEEEEc--cCCCCCcccHHHHHHHHHHCC-CEEEEEEe
Confidence 44568889 6765544 567788898888 47777754
No 96
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=34.16 E-value=36 Score=23.70 Aligned_cols=28 Identities=14% Similarity=0.146 Sum_probs=17.6
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
.+++++|||.-||-... ..|.+.|.+.|
T Consensus 2 ~~~~~~ILivdd~~~~~---~~l~~~L~~~~ 29 (144)
T 3kht_A 2 SLRSKRVLVVEDNPDDI---ALIRRVLDRKD 29 (144)
T ss_dssp ---CEEEEEECCCHHHH---HHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCHHHH---HHHHHHHHhcC
Confidence 45678999998885443 44556677777
No 97
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=34.02 E-value=32 Score=26.84 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=25.4
Q ss_pred CCCCeEEEecCCCCCCcc--HHHHHHHHHhcCCCcEEEEec
Q 029120 64 SSKPVLLVTNGDGIESPG--LVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG--I~aL~~aL~~~G~~dV~VvAP 102 (198)
..+.-|||| ||....+ +...++.|++.| ..|+++.=
T Consensus 124 ~~~~iillT--DG~~~~~~~~~~~~~~~~~~g-i~v~~igv 161 (223)
T 2b2x_A 124 VKKVMVIVT--DGESHDNYRLKQVIQDCEDEN-IQRFSIAI 161 (223)
T ss_dssp SEEEEEEEE--SSCCTTGGGHHHHHHHHHTTT-EEEEEEEE
T ss_pred CCeEEEEEc--CCCCCCCccHHHHHHHHHHCC-CEEEEEEe
Confidence 344568889 6765555 677888898888 47777754
No 98
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=33.89 E-value=30 Score=28.13 Aligned_cols=43 Identities=9% Similarity=0.110 Sum_probs=32.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCcc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qSg 108 (198)
+.-+|||. ||.+.+=+ ++++.+.|++.|...|.++++-..+++
T Consensus 133 ~Gk~VllV-DDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~ 176 (225)
T 2jbh_A 133 AGKNVLIV-EDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTS 176 (225)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 44578888 99998744 778889999998778888887654443
No 99
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=33.84 E-value=31 Score=27.81 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=32.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCcc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qSg 108 (198)
+.-+|||. ||.+.+=+ ++++++.|++.|...|.++++..-..+
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 117 ENRHIMLV-EDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG 160 (211)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 44578888 99887644 778899999998778888888765444
No 100
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=33.75 E-value=30 Score=28.29 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=33.1
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCcc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qSg 108 (198)
+.-+|||. ||.+.+=+ +.++++.|++.|...|.++++..-..+
T Consensus 102 ~Gk~VLLV-DDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 102 EGHHVLIV-EDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREG 145 (220)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTC
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 44578888 99887633 778899999998778888888755544
No 101
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=33.56 E-value=38 Score=26.14 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=24.7
Q ss_pred CCCCeEEEecCCCCCCc----cHHHHHHHHHhcCCCcEEEEe
Q 029120 64 SSKPVLLVTNGDGIESP----GLVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~sp----GI~aL~~aL~~~G~~dV~VvA 101 (198)
..+.-|||| ||.... .+...++.|++.| ..|+.+.
T Consensus 115 ~~~~iillT--DG~~~~~~~~~~~~~a~~l~~~g-i~i~~ig 153 (202)
T 1ijb_A 115 ASRIALLLM--ASQEPQRMSRNFVRYVQGLKKKK-VIVIPVG 153 (202)
T ss_dssp SEEEEEEEE--CCCCCGGGCTTHHHHHHHHHHTT-EEEEEEE
T ss_pred CCeEEEEEc--cCCCCccchHHHHHHHHHHHHCC-CEEEEEe
Confidence 345568889 787653 4777788899888 4677664
No 102
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=33.52 E-value=26 Score=28.23 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=23.7
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEec
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP 102 (198)
||||||=--|+- | +.|++.|.+.| |+|+++.-
T Consensus 1 MkILVTGatGfI--G-~~L~~~L~~~G-~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFI--G-TALTQLLNARG-HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHH--H-HHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHH--H-HHHHHHHHHCC-CEEEEEEC
Confidence 899999433331 2 56889999999 89998864
No 103
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=33.43 E-value=1.7e+02 Score=23.27 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=42.8
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchHHH
Q 029120 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDC 141 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPaDC 141 (198)
..+..+||||=- +-|| +++++.|.+.| ++|+++.-..++- .+ ...+.+|=+=.+.
T Consensus 18 ~l~~k~vlVTGa----s~gIG~aia~~l~~~G-~~V~~~~r~~~~~--------~~-----------~~~~~~Dl~d~~~ 73 (253)
T 2nm0_A 18 SHMSRSVLVTGG----NRGIGLAIARAFADAG-DKVAITYRSGEPP--------EG-----------FLAVKCDITDTEQ 73 (253)
T ss_dssp --CCCEEEEETT----TSHHHHHHHHHHHHTT-CEEEEEESSSCCC--------TT-----------SEEEECCTTSHHH
T ss_pred CCCCCEEEEeCC----CCHHHHHHHHHHHHCC-CEEEEEeCChHhh--------cc-----------ceEEEecCCCHHH
Confidence 344567999932 3366 57889999999 7898876543221 11 1234455444455
Q ss_pred HHHHHhcccCCCCCCcEEEe
Q 029120 142 VSLALSGALFSWSKPLLVIS 161 (198)
Q Consensus 142 V~laL~~~l~~~~~PDLVIS 161 (198)
+.-.+..+.....++|.||.
T Consensus 74 v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 74 VEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp HHHHHHHHHHHTCSCSEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEE
Confidence 55555443222357899985
No 104
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=33.23 E-value=36 Score=27.01 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCcc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qSg 108 (198)
+.-+|||. ||.+.+=+ +.+.++.|++.|...|.++++-....+
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 160 (205)
T 1yfz_A 117 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 160 (205)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CcCEEEEE-CCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 44578888 99887644 778889999998778888887755444
No 105
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=33.01 E-value=58 Score=24.93 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=21.1
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
...+++|||.-||-. -...|.+.|.+.|++.|.
T Consensus 58 ~~~~~~ILiVdDd~~---~~~~l~~~L~~~g~~~v~ 90 (206)
T 3mm4_A 58 FLRGKRVLVVDDNFI---SRKVATGKLKKMGVSEVE 90 (206)
T ss_dssp TTTTCEEEEECSCHH---HHHHHHHHHHHTTCSEEE
T ss_pred ccCCCEEEEEeCCHH---HHHHHHHHHHHcCCCeee
Confidence 456789999998843 334556667777732443
No 106
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=32.83 E-value=34 Score=28.85 Aligned_cols=35 Identities=9% Similarity=-0.076 Sum_probs=26.6
Q ss_pred CCeEEEecCCCCCCcc---HHHHHHHHHhcCCCcEEEEe
Q 029120 66 KPVLLVTNGDGIESPG---LVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 66 ~~~ILlTNDDGi~spG---I~aL~~aL~~~G~~dV~VvA 101 (198)
+|+|-|.+|+++.-.. ...|.+.|.+.| |+|.=+-
T Consensus 3 ~MkIaigsDha~~lK~~~i~~~l~~~L~~~G-~eV~D~G 40 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSVAGGLG-HDVFNVG 40 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHHHTT-CEEEECS
T ss_pred ccEEEEECCCcHHHHChhHHHHHHHHHHHCC-CEEEEcC
Confidence 4899999999944333 237889999999 8887654
No 107
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=32.58 E-value=40 Score=28.65 Aligned_cols=34 Identities=18% Similarity=0.044 Sum_probs=24.9
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEec
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP 102 (198)
++.++|||.|-.++ ++. +++++++.| ++|+++-.
T Consensus 5 ~~~~~ilI~g~g~~---~~~-~~~a~~~~G-~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAGRG---QLG-LYKAAKELG-IHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCCGG---GHH-HHHHHHHHT-CEEEEEEC
T ss_pred cCCCEEEEECCcHh---HHH-HHHHHHHCC-CEEEEEcC
Confidence 45678999998864 344 778899999 67777743
No 108
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=32.58 E-value=46 Score=22.57 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=19.0
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
++++|||..||-.... .|.+.|.+.| ++|..
T Consensus 5 ~~~~ilivdd~~~~~~---~l~~~L~~~g-~~v~~ 35 (132)
T 3lte_A 5 QSKRILVVDDDQAMAA---AIERVLKRDH-WQVEI 35 (132)
T ss_dssp --CEEEEECSCHHHHH---HHHHHHHHTT-CEEEE
T ss_pred CCccEEEEECCHHHHH---HHHHHHHHCC-cEEEE
Confidence 4579999998855433 3445566667 56653
No 109
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=32.30 E-value=50 Score=27.31 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=29.9
Q ss_pred CeEEEec---CCCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 67 PVLLVTN---GDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 67 ~~ILlTN---DDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
.-|||+| =||++-.-+...++.|+++| ++|.+++|...+
T Consensus 26 V~ill~~~~~~dG~e~~E~~~p~~vL~~aG-~~V~~~S~~~g~ 67 (242)
T 3l3b_A 26 SAVILAGCGHMDGSEIREAVLVMLELDRHN-VNFKCFAPNKNQ 67 (242)
T ss_dssp EEEECCCSSTTTSCCHHHHHHHHHHHHHTT-CEEEEEECSSBC
T ss_pred EEEEEecCCCCCCeeHHHHHHHHHHHHHCC-CEEEEEecCCCc
Confidence 3355553 16777777888899999999 799999998753
No 110
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=32.20 E-value=44 Score=22.19 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=18.3
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.+++|||..||-.. ...|.+.|.+.| ++|.
T Consensus 4 m~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~ 33 (127)
T 2gkg_A 4 MSKKILIVESDTAL---SATLRSALEGRG-FTVD 33 (127)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHHHHT-CEEE
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHHhcC-ceEE
Confidence 34689999888433 344555666667 5664
No 111
>3u27_C Microcompartments protein; structural genomics, PSI-biology, MCSG, alpha-beta-alpha FOL bacterial microcompartment, shell protein; 1.85A {Leptotrichia buccalis c-1013-b}
Probab=32.18 E-value=24 Score=29.88 Aligned_cols=54 Identities=22% Similarity=0.140 Sum_probs=41.6
Q ss_pred EEcCchHHHHHHHHhcccCCCCCCcEE-EecCCCCCCCcCcccchhhHHHHHHHHHcC
Q 029120 133 EVSGTPVDCVSLALSGALFSWSKPLLV-ISGINRGSSCGHHMCCCRSQRGINLWCTFS 189 (198)
Q Consensus 133 ~V~GTPaDCV~laL~~~l~~~~~PDLV-ISGIN~G~N~G~~v~ySGTVgAA~EAa~~G 189 (198)
.+.++|+ ...+|.+..++. -..+|+ +-.+..|.+.|. ++.+|.|+|..+|+..+
T Consensus 152 il~~~p~-~ai~aaD~A~Ka-A~V~l~~~~~p~~~~~~~g-~~itGdvsAV~aAv~a~ 206 (220)
T 3u27_C 152 YLIAPPL-EAMYALDVALKA-ADVRLVAFYGPPSETNFGG-GLLTGSQSACKAACDAF 206 (220)
T ss_dssp EEEESHH-HHHHHHHHHHHH-SSCEEEEEECSCCTTSCEE-EEEESCHHHHHHHHHHH
T ss_pred EEEcCCH-HHHHHHHHHHhh-CCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHHHHH
Confidence 4688999 788888876643 468888 577777777776 88999999988887654
No 112
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=31.00 E-value=53 Score=22.46 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=20.5
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~Vv 100 (198)
++++|||..||-.. ...|.+.|.+.| ++|..+
T Consensus 6 ~~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~~~ 37 (136)
T 3hdv_A 6 ARPLVLVVDDNAVN---REALILYLKSRG-IDAVGA 37 (136)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHHTT-CCEEEE
T ss_pred CCCeEEEECCCHHH---HHHHHHHHHHcC-ceEEEe
Confidence 45789999988543 344556666777 566543
No 113
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=30.95 E-value=38 Score=27.83 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=28.4
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
...+..|.||=|||+...+...+.+.|++.|. ..+.
T Consensus 22 ~~~~k~VaLTFDDG~~~~~t~~il~iL~~~~v-~ATF 57 (254)
T 2vyo_A 22 CTNSGMIAINFVDGPVRGVTDRILNTLDELGV-KATF 57 (254)
T ss_dssp CSSSSEEEEEEESCCCTTHHHHHHHHHHHHTC-CCEE
T ss_pred CCCCCEEEEEEeCCCCcccHHHHHHHHHHcCC-CEEE
Confidence 34456799999999998888888999999874 4444
No 114
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=30.43 E-value=64 Score=24.17 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=23.5
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
|+||||=--|. -| +.|++.|.+.| ++|+++.-..
T Consensus 1 MkvlVtGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGR--AG-SRILEEAKNRG-HEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESCS
T ss_pred CeEEEEcCCch--hH-HHHHHHHHhCC-CEEEEEEcCc
Confidence 68999932221 23 46788888889 8998887643
No 115
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.31 E-value=60 Score=22.88 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=20.8
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.+++++|||.-||-.. ...|.+.|...| ++|.
T Consensus 4 ~~~~~~iLivdd~~~~---~~~l~~~L~~~g-~~v~ 35 (154)
T 2rjn_A 4 NYKNYTVMLVDDEQPI---LNSLKRLIKRLG-CNII 35 (154)
T ss_dssp CCSCCEEEEECSCHHH---HHHHHHHHHTTT-CEEE
T ss_pred CCCCCeEEEEcCCHHH---HHHHHHHHHHcC-CeEE
Confidence 3567899999888433 344555666667 5655
No 116
>1sph_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 2.00A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1jem_A* 2hid_A 2hpr_A
Probab=30.15 E-value=28 Score=24.62 Aligned_cols=76 Identities=24% Similarity=0.253 Sum_probs=47.8
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeee-CCce-eEEEcCchHHHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGAT-AYEVSGTPVDCVSL 144 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~-~g~~-~~~V~GTPaDCV~l 144 (198)
-.|-|+|..|+++.=...|++...+.. .+|+|.. ..+..-+.|+- .+-.... .|.. ...++|.=++-+.-
T Consensus 4 ~~v~i~~~~GLHARpAa~~v~~a~~f~-s~I~i~~--~~~~vnaKSim-----~lm~L~~~~g~~i~i~~~G~De~~A~~ 75 (88)
T 1sph_A 4 KTFKVTADSGIHARPATVLVQTASKYD-ADVNLEY--NGKTVNLKDIM-----GVMSLGIAKGAEITISASGADENDALN 75 (88)
T ss_dssp EEEEBCCTTCSCHHHHHHHHHHHTTSS-SEEEEEE--TTEEEETTCHH-----HHHHHCCCTTCEEEEEEESTTHHHHHH
T ss_pred EEEEEcCCCCccHHHHHHHHHHHhhCC-CeEEEEE--CCEEEehHhHH-----HHHhcCCCCCCEEEEEEeCCCHHHHHH
Confidence 358899999999999999999998877 6888875 33444444331 0000000 1332 25677776666666
Q ss_pred HHhccc
Q 029120 145 ALSGAL 150 (198)
Q Consensus 145 aL~~~l 150 (198)
+|..++
T Consensus 76 ~l~~l~ 81 (88)
T 1sph_A 76 ALEETM 81 (88)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 117
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=30.00 E-value=37 Score=24.98 Aligned_cols=81 Identities=23% Similarity=0.226 Sum_probs=48.0
Q ss_pred CCCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeee-CCcee-EEEcCch
Q 029120 61 NVDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGATA-YEVSGTP 138 (198)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~-~g~~~-~~V~GTP 138 (198)
+..+..-.+.|+|..|+++.=...|++...+.. .+|+|.. ..+..-+.|+- .+-.... .|..+ ..++|-=
T Consensus 10 ~~~~~~~~v~I~n~~GLHARPAa~~v~~A~~f~-s~I~i~~--~~~~vdAKSIm-----~lmsLg~~~G~~i~i~a~G~D 81 (100)
T 1kkl_H 10 HGSMAQKTFKVTADSGIHARPATVLVQTASKYD-ADVNLEY--NGKTVNLKSIM-----GVMSLGIAKGAEITISASGAD 81 (100)
T ss_dssp -----CEEEEBCCTTCSCHHHHHHHHHHHHTCS-SEEEEEE--TTEEEETTCHH-----HHHHTCCCTTCEEEEEEESTT
T ss_pred cCceEEEEEEEcCCCccCHHHHHHHHHHHhhCC-CeEEEEE--CCEEEecHhHH-----HHhcCCCCCCCEEEEEEeCCC
Confidence 344555679999999999999999999999887 6888875 33334444331 0000000 13222 4567766
Q ss_pred HHHHHHHHhcc
Q 029120 139 VDCVSLALSGA 149 (198)
Q Consensus 139 aDCV~laL~~~ 149 (198)
++-+.-+|..+
T Consensus 82 ee~Al~~l~~l 92 (100)
T 1kkl_H 82 ENDALNALEET 92 (100)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666654
No 118
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=29.81 E-value=68 Score=24.75 Aligned_cols=38 Identities=18% Similarity=0.186 Sum_probs=24.2
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
..+.|+||||=--|. -| ++|++.|.+.| ++|+++.-..
T Consensus 18 ~l~~~~ilVtGatG~--iG-~~l~~~L~~~G-~~V~~~~R~~ 55 (236)
T 3e8x_A 18 YFQGMRVLVVGANGK--VA-RYLLSELKNKG-HEPVAMVRNE 55 (236)
T ss_dssp ---CCEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESSG
T ss_pred CcCCCeEEEECCCCh--HH-HHHHHHHHhCC-CeEEEEECCh
Confidence 456689999932221 22 45778888888 7999887543
No 119
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=29.73 E-value=66 Score=24.30 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=22.5
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
|+||||=--|. -| +.|++.|.+.| ++|+++.-.
T Consensus 1 MkilVtGatG~--iG-~~l~~~L~~~g-~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGR--AG-SAIVAEARRRG-HEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESC
T ss_pred CEEEEEcCCCH--HH-HHHHHHHHHCC-CEEEEEEec
Confidence 67999832222 23 56788888888 799888643
No 120
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=29.73 E-value=44 Score=24.77 Aligned_cols=35 Identities=11% Similarity=0.258 Sum_probs=24.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEE
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~Vv 100 (198)
+.-+|||. ||.+.+=+ +.++.+.|++.|...|.++
T Consensus 82 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~ga~~v~~~ 117 (153)
T 1vdm_A 82 KDKRVVIV-DDVSDTGKTLEVVIEEVKKLGAKEIKIA 117 (153)
T ss_dssp BTCEEEEE-EEEESSCHHHHHHHHHHHTTTBSEEEEE
T ss_pred CCCEEEEE-ecccCChHHHHHHHHHHHHcCCCEEEEE
Confidence 44578888 88887633 6788899999885555333
No 121
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=29.50 E-value=87 Score=25.77 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=25.8
Q ss_pred CCCCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCcEEEEe
Q 029120 62 VDSSKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~-spGI-~aL~~aL~~~G~~dV~VvA 101 (198)
++.+...+||| |-. +-|| +++++.|.+.| ++|+++.
T Consensus 5 ~~l~gk~~lVT---Ga~~s~GIG~aia~~la~~G-~~Vv~~~ 42 (315)
T 2o2s_A 5 IDLRGQTAFVA---GVADSHGYGWAIAKHLASAG-ARVALGT 42 (315)
T ss_dssp CCCTTCEEEEE---CCSSSSSHHHHHHHHHHTTT-CEEEEEE
T ss_pred ccCCCCEEEEe---CCCCCCChHHHHHHHHHHCC-CEEEEEe
Confidence 34555679999 331 4566 56889999999 7898875
No 122
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=29.30 E-value=24 Score=28.62 Aligned_cols=83 Identities=16% Similarity=0.032 Sum_probs=45.0
Q ss_pred CCCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCchH
Q 029120 61 NVDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPV 139 (198)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTPa 139 (198)
.|+.+..+||||=- +-|| +++++.|.+.| ++|+++.-..++- -.. +...+...+.+|=+=.
T Consensus 22 ~m~l~~k~vlVTGa----s~gIG~aia~~l~~~G-~~V~~~~r~~~~~--~~~-----------~~~~~~~~~~~Dv~~~ 83 (260)
T 3gem_A 22 HMTLSSAPILITGA----SQRVGLHCALRLLEHG-HRVIISYRTEHAS--VTE-----------LRQAGAVALYGDFSCE 83 (260)
T ss_dssp -----CCCEEESST----TSHHHHHHHHHHHHTT-CCEEEEESSCCHH--HHH-----------HHHHTCEEEECCTTSH
T ss_pred CcCCCCCEEEEECC----CCHHHHHHHHHHHHCC-CEEEEEeCChHHH--HHH-----------HHhcCCeEEECCCCCH
Confidence 56667778999932 2355 46889999999 7899887544321 000 0001233455665555
Q ss_pred HHHHHHHhcccCCCCCCcEEEe
Q 029120 140 DCVSLALSGALFSWSKPLLVIS 161 (198)
Q Consensus 140 DCV~laL~~~l~~~~~PDLVIS 161 (198)
+.+.-.+..+.....++|.||.
T Consensus 84 ~~v~~~~~~~~~~~g~iD~lv~ 105 (260)
T 3gem_A 84 TGIMAFIDLLKTQTSSLRAVVH 105 (260)
T ss_dssp HHHHHHHHHHHHHCSCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEE
Confidence 5555555543222357999985
No 123
>1y51_A Phosphocarrier protein HPR; bacillus stearothermophilus HPR F29W mutant, transport protein; 1.65A {Geobacillus stearothermophilus} PDB: 1y50_A 1y4y_A 2nzu_L* 1rzr_T* 2nzv_L* 2oen_L* 2fep_S* 3oqm_S* 3oqn_S* 3oqo_S*
Probab=29.29 E-value=34 Score=24.17 Aligned_cols=76 Identities=24% Similarity=0.265 Sum_probs=47.3
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeee-CCcee-EEEcCchHHHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGATA-YEVSGTPVDCVSL 144 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~-~g~~~-~~V~GTPaDCV~l 144 (198)
-.|-|+|..|+++.=...|++...+.. .+|+|.. ..+..-++|+- .+-.... .|..+ +.++|-=++-+.-
T Consensus 4 ~~v~i~~~~GlHARpAa~~v~~a~~f~-s~I~i~~--~~~~vdaKSim-----~lm~L~~~~g~~i~i~~~G~De~~A~~ 75 (88)
T 1y51_A 4 KTFKVVSDSGIHARPATILVQTASKWN-SEIQLEY--NGKTVNLKSIM-----GVMSLGIPKGATIKITAEGADAAEAMA 75 (88)
T ss_dssp EEEEBCCTTCSCHHHHHHHHHHHHTSS-SEEEEEE--TTEEEETTCHH-----HHHHTCCCTTCEEEEEEESTTHHHHHH
T ss_pred EEEEEcCCCCccHHHHHHHHHHHhhCC-CeEEEEE--CCEEEehHhHH-----HHHhcCCCCCCEEEEEEeCCCHHHHHH
Confidence 358899999999999999999999887 6888875 33434444331 0000000 13322 4567776666666
Q ss_pred HHhccc
Q 029120 145 ALSGAL 150 (198)
Q Consensus 145 aL~~~l 150 (198)
+|..++
T Consensus 76 ~l~~l~ 81 (88)
T 1y51_A 76 ALTDTL 81 (88)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 124
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=29.24 E-value=91 Score=25.20 Aligned_cols=36 Identities=19% Similarity=0.321 Sum_probs=26.0
Q ss_pred CCCCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCcEEEEe
Q 029120 62 VDSSKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~-spGI-~aL~~aL~~~G~~dV~VvA 101 (198)
|+.+..++||| |-. +-|| +++++.|.+.| ++|+++.
T Consensus 4 ~~l~~k~~lVT---Gas~~~GIG~aia~~la~~G-~~V~~~~ 41 (297)
T 1d7o_A 4 IDLRGKRAFIA---GIADDNGYGWAVAKSLAAAG-AEILVGT 41 (297)
T ss_dssp CCCTTCEEEEE---CCSSSSSHHHHHHHHHHHTT-CEEEEEE
T ss_pred cccCCCEEEEE---CCCCCCChHHHHHHHHHHCC-CeEEEee
Confidence 34555679999 322 2566 57889999999 7888875
No 125
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=29.05 E-value=41 Score=27.57 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=32.4
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCCcc
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDKSV 108 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~qSg 108 (198)
+.-+|||. ||.+.+=+ ++++.+.|++.|...|.++++-.-+.+
T Consensus 141 ~Gk~VLIV-DDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 141 RDKHVLIV-EDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTD 184 (233)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCT
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 34568888 99988744 788899999998777888887654444
No 126
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=29.03 E-value=55 Score=22.42 Aligned_cols=27 Identities=11% Similarity=0.087 Sum_probs=15.8
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
..+++|||..||-... ..|.+.|.+.|
T Consensus 5 ~~~~~ilivdd~~~~~---~~l~~~L~~~~ 31 (137)
T 3hdg_A 5 EVALKILIVEDDTDAR---EWLSTIISNHF 31 (137)
T ss_dssp --CCCEEEECSCHHHH---HHHHHHHHTTC
T ss_pred ccccEEEEEeCCHHHH---HHHHHHHHhcC
Confidence 3468999999985443 33444555544
No 127
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=28.95 E-value=46 Score=23.02 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=19.5
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
.+++|||.-||-.. ...|.+.|.+.| ++|..
T Consensus 5 ~~~~ilivdd~~~~---~~~l~~~L~~~g-~~v~~ 35 (136)
T 3kto_A 5 HHPIIYLVDHQKDA---RAALSKLLSPLD-VTIQC 35 (136)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHTTSS-SEEEE
T ss_pred CCCeEEEEcCCHHH---HHHHHHHHHHCC-cEEEE
Confidence 45799999888443 344555677777 67663
No 128
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=28.90 E-value=1e+02 Score=25.24 Aligned_cols=36 Identities=28% Similarity=0.317 Sum_probs=25.6
Q ss_pred CCCCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCcEEEEe
Q 029120 62 VDSSKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~-spGI-~aL~~aL~~~G~~dV~VvA 101 (198)
++.+...+||| |-. +-|| +++++.|.+.| ++|+++.
T Consensus 5 ~~l~~k~~lVT---Ga~~s~GIG~aia~~la~~G-~~Vv~~~ 42 (319)
T 2ptg_A 5 VDLRGKTAFVA---GVADSNGYGWAICKLLRAAG-ARVLVGT 42 (319)
T ss_dssp CCCTTCEEEEE---CCCCTTSHHHHHHHHHHHTT-CEEEEEE
T ss_pred cccCCCEEEEe---CCCCCCcHHHHHHHHHHHCC-CEEEEEe
Confidence 34455679999 331 3455 57889999999 7888875
No 129
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=28.70 E-value=56 Score=24.24 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=19.1
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
+.+++|||.-||-... ..|.+.|.+.| ++|.
T Consensus 5 m~~~~iLivdd~~~~~---~~l~~~L~~~g-~~v~ 35 (184)
T 3rqi_A 5 MSDKNFLVIDDNEVFA---GTLARGLERRG-YAVR 35 (184)
T ss_dssp --CCEEEEECSCHHHH---HHHHHHHHHTT-CEEE
T ss_pred CCCCeEEEEcCCHHHH---HHHHHHHHHCC-CEEE
Confidence 5668999998884433 34455566667 5663
No 130
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=28.53 E-value=60 Score=23.95 Aligned_cols=35 Identities=17% Similarity=0.059 Sum_probs=25.4
Q ss_pred CCCeEEEecCCCCCCccH----HHHHHHHHhcCCCcEEEEec
Q 029120 65 SKPVLLVTNGDGIESPGL----VYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI----~aL~~aL~~~G~~dV~VvAP 102 (198)
.+.-|||| ||....+. ...++.+++.| ..|+.+.=
T Consensus 107 ~~~iillT--DG~~~~~~~~~~~~~~~~~~~~g-i~i~~igv 145 (185)
T 3n2n_F 107 ASVIIALT--DGELHEDLFFYSEREANRSRDLG-AIVYAVGV 145 (185)
T ss_dssp EEEEEEEE--CCCCCHHHHHHHHHHHHHHHHTT-EEEEEEEC
T ss_pred CcEEEEEc--CCCCCCCcccchHHHHHHHHHCC-CEEEEEEe
Confidence 45668999 88876665 57788888888 56776643
No 131
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=27.98 E-value=72 Score=25.99 Aligned_cols=44 Identities=11% Similarity=-0.003 Sum_probs=30.9
Q ss_pred CCCCCCeEEEecCCCCCCc-cHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 62 VDSSKPVLLVTNGDGIESP-GLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~sp-GI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
|..++.||+|-==-++.+. -...|.+.|++.| ++|+|+.-..-+
T Consensus 3 m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g-~eV~vv~T~~A~ 47 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHCTYHEVLPQMERLVELG-AKVTPFVTHTVQ 47 (201)
T ss_dssp CCCTTCEEEEECCSCGGGGGGTHHHHHHHHHTT-CEEEEECSSCSC
T ss_pred CCcCCCEEEEEEEChHHHHHHHHHHHHHHhhCC-CEEEEEEChhHH
Confidence 4455567777655666666 4556779999998 899999855433
No 132
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=27.92 E-value=52 Score=26.79 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCCCc--cHHHHHHHHHhcCCCcEEEEec
Q 029120 65 SKPVLLVTNGDGIESP--GLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 65 ~~~~ILlTNDDGi~sp--GI~aL~~aL~~~G~~dV~VvAP 102 (198)
.+.-|||| ||.... .+...++.|++.| ..|+++.=
T Consensus 129 ~~~iillT--DG~~~d~~~~~~~~~~l~~~g-v~i~~igi 165 (281)
T 4hqf_A 129 NQLVVILT--DGIPDSIQDSLKESRKLSDRG-VKIAVFGI 165 (281)
T ss_dssp EEEEEEEE--SSCCSCHHHHHHHHHHHHHTT-CEEEEEEE
T ss_pred CEEEEEEe--cCCCCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 45678999 787654 5777788899888 57887753
No 133
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=27.92 E-value=65 Score=22.18 Aligned_cols=29 Identities=28% Similarity=0.572 Sum_probs=19.1
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
+++|||..||-.. ...|.+.|.+.| ++|.
T Consensus 4 ~~~iLivdd~~~~---~~~l~~~L~~~g-~~v~ 32 (142)
T 2qxy_A 4 TPTVMVVDESRIT---FLAVKNALEKDG-FNVI 32 (142)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHGGGT-CEEE
T ss_pred CCeEEEEeCCHHH---HHHHHHHHHhCC-CEEE
Confidence 4689999888433 344556677777 5665
No 134
>1ka5_A Phosphocarrier protein HPR; open faced beta-sandwich, structural proteomics in europe, spine, structural genomics, ligand transport; NMR {Staphylococcus aureus} SCOP: d.94.1.1 PDB: 1qr5_A 1txe_A
Probab=27.91 E-value=31 Score=24.45 Aligned_cols=75 Identities=17% Similarity=0.193 Sum_probs=46.7
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeee-CCce-eEEEcCchHHHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGAT-AYEVSGTPVDCVSL 144 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~-~g~~-~~~V~GTPaDCV~l 144 (198)
-+|-|+|..|+++.=...|++...+.. .+|+|.. ..+..-+.|+- .+-.... .|.. ...++|.=++-+.-
T Consensus 4 ~~v~i~~~~GLHARpAa~~v~~a~~f~-s~I~i~~--~~~~vnaKSim-----~lm~Lg~~~G~~i~i~a~G~De~~A~~ 75 (88)
T 1ka5_A 4 NSYVIIDETGIHARPATMLVQTASKFD-SDIQLEY--NGKKVNLKSIM-----GVMSLGVGKDAEITIYADGSDESDAIQ 75 (88)
T ss_dssp EEEEBCCTTCSCHHHHHHHHHHHHHHS-SEEEEEE--TTEEEETTCHH-----HHHTTTCCTTCEEEEEEESSSHHHHHH
T ss_pred EEEEEcCCCCccHHHHHHHHHHHhhCC-CeEEEEE--CCEEEehHhHH-----HHHhcCCCCCCEEEEEEeCCCHHHHHH
Confidence 358899999999999999999999887 6898875 33444444331 0000000 1332 24567766666666
Q ss_pred HHhcc
Q 029120 145 ALSGA 149 (198)
Q Consensus 145 aL~~~ 149 (198)
+|..+
T Consensus 76 ~l~~l 80 (88)
T 1ka5_A 76 AISDV 80 (88)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 135
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=27.88 E-value=59 Score=28.09 Aligned_cols=36 Identities=25% Similarity=0.445 Sum_probs=28.8
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEe
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvA 101 (198)
+.-+|||. ||.+.+-+ +...+++|++.|...|++++
T Consensus 216 ~gk~VlLV-DDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILI-DDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEE-CSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE-ecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 34467777 99998755 67788999999988888888
No 136
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=27.80 E-value=50 Score=23.97 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=16.8
Q ss_pred CCCCCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 60 ENVDSSKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 60 ~~~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
..|.++.++|||..||-... ..|.+.|.+.|
T Consensus 19 ~~M~~~~~~ILivdd~~~~~---~~l~~~L~~~~ 49 (164)
T 3t8y_A 19 SHMTDRVIRVLVVDDSAFMR---MVLKDIIDSQP 49 (164)
T ss_dssp -----CCEEEEEECSCHHHH---HHHHHHHHTST
T ss_pred cccccCccEEEEEcCCHHHH---HHHHHHHhcCC
Confidence 36667778999999984433 33444555554
No 137
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=27.72 E-value=89 Score=24.17 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=23.7
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEec
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP 102 (198)
|+|+|. |.|. .+...++++|++.| .++.++-+
T Consensus 3 ~~I~ii-d~~~--~~~~~~~~~l~~~G-~~~~~~~~ 34 (200)
T 1ka9_H 3 MKALLI-DYGS--GNLRSAAKALEAAG-FSVAVAQD 34 (200)
T ss_dssp CEEEEE-CSSC--SCHHHHHHHHHHTT-CEEEEESS
T ss_pred cEEEEE-eCCC--ccHHHHHHHHHHCC-CeEEEecC
Confidence 688888 5553 45677889999999 67877643
No 138
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=27.40 E-value=69 Score=21.34 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=18.0
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
+.++|||..||-... ..+.+.|...| ++|.
T Consensus 2 ~~~~ilivdd~~~~~---~~l~~~l~~~~-~~v~ 31 (123)
T 1xhf_A 2 QTPHILIVEDELVTR---NTLKSIFEAEG-YDVF 31 (123)
T ss_dssp CCCEEEEECSCHHHH---HHHHHHHHTTT-CEEE
T ss_pred CCceEEEEeCCHHHH---HHHHHHHhhCC-cEEE
Confidence 457899998874332 33445566566 4543
No 139
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=27.40 E-value=44 Score=25.41 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=24.4
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEE
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHV 99 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~V 99 (198)
+.-+|||. ||.+.+=+ +.++++.|++.|...|.+
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLV-SDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEE-eccccchHHHHHHHHHHHHcCCeEEEE
Confidence 34578888 88887633 678889999998544544
No 140
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=27.38 E-value=52 Score=25.19 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcC-CCcEEEEecCC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREG-LYNVHVCAPQS 104 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G-~~dV~VvAP~~ 104 (198)
+.-+|||. ||.+.+=+ +.++++.|++.| ...|.+++...
T Consensus 97 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~ 137 (181)
T 1a3c_A 97 TDQKVILV-DDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVD 137 (181)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEc
Confidence 44578888 89887633 778889999986 77888888764
No 141
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=27.15 E-value=68 Score=21.98 Aligned_cols=30 Identities=27% Similarity=0.251 Sum_probs=18.4
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
+.++|||.-||-... ..|.+.|...| ++|.
T Consensus 2 ~~~~Ilivdd~~~~~---~~l~~~L~~~g-~~v~ 31 (132)
T 3crn_A 2 SLKRILIVDDDTAIL---DSTKQILEFEG-YEVE 31 (132)
T ss_dssp -CCEEEEECSCHHHH---HHHHHHHHHTT-CEEE
T ss_pred CccEEEEEeCCHHHH---HHHHHHHHHCC-ceEE
Confidence 357899998884433 33444566667 5665
No 142
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=27.08 E-value=73 Score=21.86 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=20.5
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
.+.+++|||.-||-... ..|.+.|...| ++|..
T Consensus 12 ~~~~~~ilivdd~~~~~---~~l~~~L~~~g-~~v~~ 44 (138)
T 2b4a_A 12 HMQPFRVTLVEDEPSHA---TLIQYHLNQLG-AEVTV 44 (138)
T ss_dssp --CCCEEEEECSCHHHH---HHHHHHHHHTT-CEEEE
T ss_pred CCCCCeEEEECCCHHHH---HHHHHHHHHcC-CEEEE
Confidence 46778999998885433 34555666677 56643
No 143
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=26.87 E-value=76 Score=21.71 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=18.4
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
.+.+++|||..||-.. ...|.+.|.+.|
T Consensus 3 ~~~~~~iLivdd~~~~---~~~l~~~L~~~g 30 (149)
T 1k66_A 3 GNATQPLLVVEDSDED---FSTFQRLLQREG 30 (149)
T ss_dssp SCTTSCEEEECCCHHH---HHHHHHHHHHTT
T ss_pred CCCCccEEEEECCHHH---HHHHHHHHHHcC
Confidence 3566889999888433 334555666666
No 144
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=26.83 E-value=63 Score=22.76 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=19.2
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
++++|||..||-.. ...|.+.|.+.| ++|..
T Consensus 2 ~~~~ILivdd~~~~---~~~l~~~L~~~g-~~v~~ 32 (155)
T 1qkk_A 2 AAPSVFLIDDDRDL---RKAMQQTLELAG-FTVSS 32 (155)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEEeCCHHH---HHHHHHHHHHcC-cEEEE
Confidence 45889999888433 344555666777 56653
No 145
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=26.73 E-value=1.1e+02 Score=24.51 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=26.1
Q ss_pred CCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCCcEEEEecC
Q 029120 64 SSKPVLLVTNGDGIE-SPGL-VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~-spGI-~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.+.-.+||| |-. +.|| +++++.|.+.| ++|+++.-.
T Consensus 4 l~gK~alVT---Gaa~~~GIG~aiA~~la~~G-a~Vvi~~r~ 41 (256)
T 4fs3_A 4 LENKTYVIM---GIANKRSIAFGVAKVLDQLG-AKLVFTYRK 41 (256)
T ss_dssp CTTCEEEEE---CCCSTTCHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCCCEEEEE---CCCCCchHHHHHHHHHHHCC-CEEEEEECC
Confidence 344569999 332 2466 67899999999 799988743
No 146
>3zbd_A NSP1, P9, non-structural protein 1; viral protein, alphacoronavirus; 1.49A {Porcine transmissible gastroenteritiscoronavirus}
Probab=26.45 E-value=16 Score=28.18 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=24.3
Q ss_pred CCCCCCCCCeEEEecCCCCCCccHHHHHHHHH
Q 029120 59 TENVDSSKPVLLVTNGDGIESPGLVYLVEALV 90 (198)
Q Consensus 59 ~~~~~~~~~~ILlTNDDGi~spGI~aL~~aL~ 90 (198)
-++|..++..|++.+|-+|.++|.. ..+++.
T Consensus 6 ~~~~~~~~~tLavasDseIsa~G~~-~~dav~ 36 (113)
T 3zbd_A 6 HHHMSSKQFKILVNEDYQVNVPSLP-IRDVLQ 36 (113)
T ss_dssp CCCCCCEEEEEEECSSCCEECCCBC-HHHHHH
T ss_pred ccccccceEEEEEecccccccCCcC-HHHHHH
Confidence 3577788889999999999998866 445443
No 147
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=26.17 E-value=51 Score=26.75 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=24.9
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGL 94 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~ 94 (198)
..+..|.||=|||+.......+.+.|++.+.
T Consensus 40 ~~~k~V~LTFDDG~~~~~t~~il~iL~~~~v 70 (240)
T 1ny1_A 40 TKEKTIYLTFDNGYENGYTPKVLDVLKKHRV 70 (240)
T ss_dssp TTSSEEEEEEEESSCCSCHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3456799999999987777777888888774
No 148
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=26.12 E-value=85 Score=24.94 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=25.1
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecC
Q 029120 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.+..+||||=-- .+-|| +++++.|.+.| ++|+++.-.
T Consensus 6 l~~k~vlVTGas--~~~gIG~~ia~~l~~~G-~~V~~~~r~ 43 (261)
T 2wyu_A 6 LSGKKALVMGVT--NQRSLGFAIAAKLKEAG-AEVALSYQA 43 (261)
T ss_dssp CTTCEEEEESCC--SSSSHHHHHHHHHHHHT-CEEEEEESC
T ss_pred CCCCEEEEECCC--CCCcHHHHHHHHHHHCC-CEEEEEcCC
Confidence 445679999321 01355 56888999999 788888643
No 149
>3gfh_A Ethanolamine utilization protein EUTL; bacterial mircocompartment, shell protein, structural protein; 2.20A {Escherichia coli} PDB: 3mpv_A 3i87_A 3i82_A
Probab=26.03 E-value=12 Score=31.80 Aligned_cols=53 Identities=15% Similarity=0.110 Sum_probs=41.1
Q ss_pred EEcCchHHHHHHHHhcccCCCCCCcEE-EecCCCCCCCcCcccchhhHHHHHHHHHc
Q 029120 133 EVSGTPVDCVSLALSGALFSWSKPLLV-ISGINRGSSCGHHMCCCRSQRGINLWCTF 188 (198)
Q Consensus 133 ~V~GTPaDCV~laL~~~l~~~~~PDLV-ISGIN~G~N~G~~v~ySGTVgAA~EAa~~ 188 (198)
.+.++|+ ...+|.+..++. -..+|+ +..+..|.+.+. ++.+|.|+|..+|+..
T Consensus 150 il~~~p~-~aI~aaD~A~Ka-A~V~l~~~~~p~~g~~~~g-~~itGdvsAV~aAv~a 203 (225)
T 3gfh_A 150 YLVAPPL-EATYGIDAALKS-ADVQLATYVPPPSETNYSA-AFLTGSQAACKAACNA 203 (225)
T ss_dssp EEEECHH-HHHHHHHHHHHH-SCCEEEEEECSCCTTSCEE-EEEESCSSSTTHHHHH
T ss_pred EEEcCcH-HHHHHHHHHHhh-CCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHHHH
Confidence 5689999 888888877643 568888 777778888877 7889999887666654
No 150
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=25.62 E-value=38 Score=33.51 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=32.0
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
..++.-|||. ||++..-+..++++|+++| .+|.||+|...
T Consensus 599 ~grKVaILla--DGfEe~El~~pvdaLr~AG-~~V~vVS~~~g 638 (753)
T 3ttv_A 599 KGRVVAILLN--DEVRSADLLAILKALKAKG-VHAKLLYSRMG 638 (753)
T ss_dssp TTCEEEEECC--TTCCHHHHHHHHHHHHHHT-CEEEEEESSSS
T ss_pred CCCEEEEEec--CCCCHHHHHHHHHHHHHCC-CEEEEEEcCCC
Confidence 3344445554 7999999999999999999 79999999764
No 151
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=25.59 E-value=70 Score=21.69 Aligned_cols=35 Identities=3% Similarity=0.102 Sum_probs=21.8
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
+++|||..||-... ..|.+.|.+.| ++|..++...
T Consensus 1 ~~~ilivdd~~~~~---~~l~~~L~~~g-~~v~~~~~~~ 35 (134)
T 3f6c_A 1 SLNAIIIDDHPLAI---AAIRNLLIKND-IEILAELTEG 35 (134)
T ss_dssp CEEEEEECCCHHHH---HHHHHHHHHTT-EEEEEEESSS
T ss_pred CeEEEEEcCCHHHH---HHHHHHHhhCC-cEEEEEcCCH
Confidence 37899999885543 34555666777 5665345443
No 152
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=25.46 E-value=52 Score=25.60 Aligned_cols=28 Identities=29% Similarity=0.310 Sum_probs=22.7
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGL 94 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~ 94 (198)
+..|.||=|||+.. +...+.+.|++.+.
T Consensus 4 ~~~V~LTFDDG~~~-~~~~il~iL~~~~v 31 (195)
T 2cc0_A 4 NGYVGLTFDDGPSG-STQSLLNALRQNGL 31 (195)
T ss_dssp SEEEEEEEESCCST-THHHHHHHHHHTTC
T ss_pred CCEEEEEEcCCCch-hHHHHHHHHHHcCC
Confidence 34699999999975 48888899988774
No 153
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=25.40 E-value=1.1e+02 Score=23.39 Aligned_cols=36 Identities=28% Similarity=0.216 Sum_probs=25.8
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecC
Q 029120 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~ 103 (198)
..+.++||||=-.| || +++++.|.+.| ++|+++...
T Consensus 4 ~~~~~~vlVTGasg----giG~~~a~~l~~~G-~~V~~~~r~ 40 (244)
T 1cyd_A 4 NFSGLRALVTGAGK----GIGRDTVKALHASG-AKVVAVTRT 40 (244)
T ss_dssp CCTTCEEEEESTTS----HHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCCCCEEEEeCCCc----hHHHHHHHHHHHCC-CEEEEEeCC
Confidence 35567899994432 44 56888999999 788887643
No 154
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=25.36 E-value=1.1e+02 Score=23.87 Aligned_cols=38 Identities=24% Similarity=0.341 Sum_probs=26.6
Q ss_pred CCCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecC
Q 029120 61 NVDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.+..+..+||||=- +-|| +++++.|.+.| ++|+++...
T Consensus 8 ~~~l~~k~vlItGa----sggiG~~la~~l~~~G-~~V~~~~r~ 46 (260)
T 3awd_A 8 KLRLDNRVAIVTGG----AQNIGLACVTALAEAG-ARVIIADLD 46 (260)
T ss_dssp GGCCTTCEEEEETT----TSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred ccCCCCCEEEEeCC----CchHHHHHHHHHHHCC-CEEEEEeCC
Confidence 34556678999932 2344 56888999999 788888643
No 155
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=25.23 E-value=66 Score=21.68 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=18.2
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
.+++|||..||-... ..|.+.|.+.+ +.|..
T Consensus 2 ~~~~ilivdd~~~~~---~~l~~~L~~~~-~~v~~ 32 (135)
T 3eqz_A 2 SLNRVFIVDDDTLTC---NLLKTIVEPIF-GNVEA 32 (135)
T ss_dssp -CCEEEEECSCHHHH---HHHHHHHTTTC-SCEEE
T ss_pred CcceEEEEeCCHHHH---HHHHHHHHhhc-ceeee
Confidence 468999998885433 34445565554 44433
No 156
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=25.23 E-value=75 Score=28.08 Aligned_cols=38 Identities=18% Similarity=0.363 Sum_probs=28.3
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
+++++||+.. +-+.| +..|++.|.+.| |+|+++.+...
T Consensus 6 ~~~~~vl~~p---~p~~GHi~P~l~La~~L~~rG-~~VT~v~t~~~ 47 (482)
T 2pq6_A 6 NRKPHVVMIP---YPVQGHINPLFKLAKLLHLRG-FHITFVNTEYN 47 (482)
T ss_dssp --CCEEEEEC---CSSHHHHHHHHHHHHHHHHTT-CEEEEEEEHHH
T ss_pred CCCCEEEEec---CccchhHHHHHHHHHHHHhCC-CeEEEEeCCch
Confidence 4568898886 33444 678899999999 89999988754
No 157
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=25.13 E-value=82 Score=21.19 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=17.0
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
+++|||.-||-.. ...|.+.|.+.|
T Consensus 2 ~~~ilivdd~~~~---~~~l~~~L~~~~ 26 (140)
T 1k68_A 2 HKKIFLVEDNKAD---IRLIQEALANST 26 (140)
T ss_dssp CCEEEEECCCHHH---HHHHHHHHHTCS
T ss_pred CCeEEEEeCCHHH---HHHHHHHHHhcC
Confidence 5789999888433 344556676666
No 158
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=25.02 E-value=51 Score=25.69 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=28.4
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
+.-+|||. ||-+.+=+ +.++++.|++.|...|.+++...
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~ 158 (197)
T 1y0b_A 119 DQDHVLII-DDFLANGQAAHGLVSIVKQAGASIAGIGIVIE 158 (197)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CcCEEEEE-EcccccCHHHHHHHHHHHHCCCEEEEEEEEEE
Confidence 44578888 88887633 78889999999965666665544
No 159
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=24.97 E-value=78 Score=21.91 Aligned_cols=34 Identities=18% Similarity=0.360 Sum_probs=24.7
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
.|+|+|+ |...-|.. +++.|.+.| ++|+++-...
T Consensus 4 ~m~i~Ii---G~G~iG~~-~a~~L~~~g-~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIA---GIGRVGYT-LAKSLSEKG-HDIVLIDIDK 37 (140)
T ss_dssp -CEEEEE---CCSHHHHH-HHHHHHHTT-CEEEEEESCH
T ss_pred CCEEEEE---CCCHHHHH-HHHHHHhCC-CeEEEEECCH
Confidence 4789999 66555654 678888888 7999987643
No 160
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=24.94 E-value=1e+02 Score=24.71 Aligned_cols=35 Identities=31% Similarity=0.444 Sum_probs=23.2
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecC
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~ 103 (198)
+.++||||=--|. -| +.|++.|.+.| |+|+++.-.
T Consensus 2 ~~~~vlVtGatG~--iG-~~l~~~L~~~G-~~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALITGIRGQ--DG-AYLAKLLLEKG-YEVYGADRR 36 (345)
T ss_dssp -CCEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEECSC
T ss_pred CCCEEEEECCCCh--HH-HHHHHHHHHCC-CEEEEEECC
Confidence 3578999932221 12 45788888888 799888644
No 161
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=24.84 E-value=78 Score=24.69 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=20.7
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.+.+++|||.-||-....+ |.+.|...| ++|.
T Consensus 20 ~~~~~~ILivdd~~~~~~~---l~~~L~~~g-~~v~ 51 (250)
T 3r0j_A 20 TTPEARVLVVDDEANIVEL---LSVSLKFQG-FEVY 51 (250)
T ss_dssp CCSSCEEEEECSCHHHHHH---HHHHHHHTT-CEEE
T ss_pred CCCCceEEEEECCHHHHHH---HHHHHHHCC-CEEE
Confidence 3456899999998554333 445566666 5665
No 162
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.75 E-value=2.2e+02 Score=21.39 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=50.0
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCceeEEEcCch-HHHHHHH
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTP-VDCVSLA 145 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~~~~V~GTP-aDCV~la 145 (198)
|+||||=--|. -| +.|++.|.+.| ++|+++.-..++-- .+ . +...+.+|=+= .+.
T Consensus 1 M~ilItGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~~~~~-----~~-~----------~~~~~~~D~~d~~~~---- 56 (219)
T 3dqp_A 1 MKIFIVGSTGR--VG-KSLLKSLSTTD-YQIYAGARKVEQVP-----QY-N----------NVKAVHFDVDWTPEE---- 56 (219)
T ss_dssp CEEEEESTTSH--HH-HHHHHHHTTSS-CEEEEEESSGGGSC-----CC-T----------TEEEEECCTTSCHHH----
T ss_pred CeEEEECCCCH--HH-HHHHHHHHHCC-CEEEEEECCccchh-----hc-C----------CceEEEecccCCHHH----
Confidence 68999933332 23 46788898888 78888864432110 00 1 22223333221 222
Q ss_pred HhcccCCCCCCcEEEecCCCCCCCcCcccchhhHHHHHHHHHcC
Q 029120 146 LSGALFSWSKPLLVISGINRGSSCGHHMCCCRSQRGINLWCTFS 189 (198)
Q Consensus 146 L~~~l~~~~~PDLVISGIN~G~N~G~~v~ySGTVgAA~EAa~~G 189 (198)
+..++ ..+|.||.-.-....--..+.+-||.-.+..+...|
T Consensus 57 ~~~~~---~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~ 97 (219)
T 3dqp_A 57 MAKQL---HGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE 97 (219)
T ss_dssp HHTTT---TTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTT
T ss_pred HHHHH---cCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhC
Confidence 23333 358999864443333233466777776555444443
No 163
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=24.70 E-value=76 Score=21.64 Aligned_cols=26 Identities=23% Similarity=0.208 Sum_probs=16.7
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
.+++|||.-||-. -...|.+.|.+.|
T Consensus 4 ~~~~iLivdd~~~---~~~~l~~~L~~~g 29 (129)
T 3h1g_A 4 GSMKLLVVDDSST---MRRIIKNTLSRLG 29 (129)
T ss_dssp --CCEEEECSCHH---HHHHHHHHHHHTT
T ss_pred CCcEEEEEeCCHH---HHHHHHHHHHHcC
Confidence 4588999988743 3444556677777
No 164
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=24.63 E-value=87 Score=21.51 Aligned_cols=30 Identities=10% Similarity=-0.057 Sum_probs=19.6
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHh-cCCCcEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVR-EGLYNVH 98 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~-~G~~dV~ 98 (198)
++++|||..||-... ..|.+.|.+ .| ++|.
T Consensus 3 ~~~~ilivdd~~~~~---~~l~~~L~~~~~-~~v~ 33 (140)
T 3lua_A 3 LDGTVLLIDYFEYER---EKTKIIFDNIGE-YDFI 33 (140)
T ss_dssp CCCEEEEECSCHHHH---HHHHHHHHHHCC-CEEE
T ss_pred CCCeEEEEeCCHHHH---HHHHHHHHhccC-ccEE
Confidence 357899998885443 344455666 67 5666
No 165
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=24.47 E-value=85 Score=28.16 Aligned_cols=35 Identities=23% Similarity=0.206 Sum_probs=27.5
Q ss_pred CCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEe
Q 029120 66 KPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 66 ~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvA 101 (198)
.-+|||. ||.+.+-+ ++..++.|+++|...|++++
T Consensus 338 gk~VlLV-DDvitTG~Tl~~a~~~L~~~Ga~~V~~~~ 373 (459)
T 1ao0_A 338 GKRVVMV-DDSIVRGTTSRRIVTMLREAGATEVHVKI 373 (459)
T ss_dssp TCEEEEE-ESCCSSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEEEE-eeeecCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 3468887 89887633 78889999999977788777
No 166
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=24.40 E-value=1e+02 Score=25.09 Aligned_cols=36 Identities=28% Similarity=0.412 Sum_probs=25.3
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEec
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP 102 (198)
..++|+||||=--|. -| ++|++.|.+.| ++|+++.-
T Consensus 17 ~~~~~~vlVTGasG~--iG-~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 17 RGSHMRILITGGAGC--LG-SNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp TTTCCEEEEETTTSH--HH-HHHHHHHGGGT-CEEEEEEC
T ss_pred cCCCCEEEEECCCCH--HH-HHHHHHHHHCC-CEEEEEEC
Confidence 455689999943332 12 46788898888 89988875
No 167
>3ccd_A Phosphocarrier protein HPR; succinimide, isoaspartate, protein damage, autophosphatase, transferase; 1.00A {Escherichia coli} PDB: 1cm3_A 1cm2_A 1ggr_B 1hdn_A 1j6t_B 1pfh_A* 1poh_A 1vrc_C 2jel_P 2xdf_C 3eza_B 3ezb_B 3eze_B 1opd_A
Probab=24.38 E-value=35 Score=24.01 Aligned_cols=76 Identities=16% Similarity=0.194 Sum_probs=47.4
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeeeCCce-eEEEcCchHHHHHHHH
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGAT-AYEVSGTPVDCVSLAL 146 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~~g~~-~~~V~GTPaDCV~laL 146 (198)
.|-|+|..|+++.=...|++...+.. .+|+|.. ..+..-+.|+---=.|.+. .|.. ...++|-=++-+.-+|
T Consensus 5 ~v~i~n~~GlHARpAa~~v~~a~~f~-s~I~i~~--~~~~vnaKSim~lm~Lg~~----~G~~i~i~~~G~De~~A~~~l 77 (85)
T 3ccd_A 5 EVTITAPNGLDTRPAAQFVKEAKGFT-SEITVTS--NGKSASAKSLFKLQTLGLT----QGTVVTISAEGEDEQKAVEHL 77 (85)
T ss_dssp EEECCSTTCSCHHHHHHHHHHHTTSC-SEEEEEE--TTEEEETTCHHHHTTSCCC----TTCEEEEEEESTTHHHHHHHH
T ss_pred EEEEcCCCCccHHHHHHHHHHHhhCC-CeEEEEE--CCEEEehHhHHHHHhCCCC----CCCEEEEEEeCCCHHHHHHHH
Confidence 58889999999999999999998887 6888875 3344444433100001100 1332 2567777666666666
Q ss_pred hccc
Q 029120 147 SGAL 150 (198)
Q Consensus 147 ~~~l 150 (198)
..++
T Consensus 78 ~~~~ 81 (85)
T 3ccd_A 78 VKLM 81 (85)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 168
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=23.92 E-value=26 Score=28.77 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=23.4
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhc-CCCcEEEEec
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVRE-GLYNVHVCAP 102 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~-G~~dV~VvAP 102 (198)
||||+.-....+.-++..|+++|++. | |+|.++..
T Consensus 6 mkIl~v~~~~~~~~~~~~l~~~L~~~~g-~~v~~~~~ 41 (376)
T 1v4v_A 6 KRVVLAFGTRPEATKMAPVYLALRGIPG-LKPLVLLT 41 (376)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHHTSTT-EEEEEEEC
T ss_pred eEEEEEEeccHHHHHHHHHHHHHHhCCC-CceEEEEc
Confidence 78888754321223467789999887 5 78777764
No 169
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=23.82 E-value=56 Score=25.06 Aligned_cols=41 Identities=15% Similarity=0.041 Sum_probs=29.4
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
+.-+|||. ||.+.+=+ +.++++.|++.|...|.+++...-.
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~ 160 (180)
T 1zn8_A 119 PGQRVVVV-DDLLATGGTMNAACELLGRLQAEVLECVSLVELT 160 (180)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEG
T ss_pred CCCEEEEE-cCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEcc
Confidence 44578888 88887633 7788899999996666666655433
No 170
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=23.75 E-value=1.6e+02 Score=24.57 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=25.8
Q ss_pred CCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
+..+.|+||||=--|. -| +.|++.|.+.| |+|+++.-..
T Consensus 25 ~~~~~~~vlVtGatG~--iG-~~l~~~L~~~g-~~V~~~~r~~ 63 (379)
T 2c5a_A 25 WPSENLKISITGAGGF--IA-SHIARRLKHEG-HYVIASDWKK 63 (379)
T ss_dssp CTTSCCEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESSC
T ss_pred ccccCCeEEEECCccH--HH-HHHHHHHHHCC-CeEEEEECCC
Confidence 3445578999943332 23 35678888888 7998886543
No 171
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.14 E-value=81 Score=21.46 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=19.4
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
..+++|||.-||-... ..|.+.|.+.| ++|.
T Consensus 7 ~~~~~iLivdd~~~~~---~~l~~~L~~~g-~~v~ 37 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLAA---ATLRIQLESLG-YDVL 37 (140)
T ss_dssp -CCCEEEEECCBHHHH---HHHHHHHHHHT-CEEE
T ss_pred CCCceEEEEECCHHHH---HHHHHHHHHCC-CeeE
Confidence 4568999998884433 34455566667 5664
No 172
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=23.00 E-value=97 Score=22.69 Aligned_cols=35 Identities=17% Similarity=0.036 Sum_probs=22.9
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEe
Q 029120 64 SSKPVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvA 101 (198)
..+.-|||| ||....+ +...++.+++.| ..|+++.
T Consensus 103 ~~~~iiliT--DG~~~~~~~~~~~~~~~~~~~~~-i~i~~ig 141 (182)
T 1shu_X 103 TSSIIIALT--DGKLDGLVPSYAEKEAKISRSLG-ASVYCVG 141 (182)
T ss_dssp SCEEEEEEE--CCCCCTTHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEEEC--CCCcCCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 345668888 6765433 355677788887 4676664
No 173
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=22.89 E-value=54 Score=26.18 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=23.1
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGL 94 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~ 94 (198)
+..|.||=|||+.......+.+.|++.|.
T Consensus 4 ~k~V~LTFDDG~~~~~t~~il~iL~~~~v 32 (216)
T 2c71_A 4 NKLVALTFDDGPDNVLTARVLDKLDKYNV 32 (216)
T ss_dssp -CEEEEEEESCCCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEEecCCCcccHHHHHHHHHHcCC
Confidence 34699999999987667678889988774
No 174
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=22.86 E-value=83 Score=26.89 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=23.8
Q ss_pred CCCCeEEEecCCCCC--Cc-cHHHHHHHHHhcCCCcEEEE
Q 029120 64 SSKPVLLVTNGDGIE--SP-GLVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~--sp-GI~aL~~aL~~~G~~dV~Vv 100 (198)
.++||||+.+..++- .+ ....+++.|.+.| +|.|+
T Consensus 12 ~~~MkIl~is~~~~p~~~~~~~~~l~~~l~~~G--~V~vi 49 (406)
T 2hy7_A 12 IRRPCYLVLSSHDFRTPRRANIHFITDQLALRG--TTRFF 49 (406)
T ss_dssp -CCSCEEEEESSCTTSSSCCHHHHHHHHHHHHS--CEEEE
T ss_pred CCCceEEEEecccCCChhhhhHhHHHHHHHhCC--ceEEE
Confidence 346899988776332 11 2456788888887 89999
No 175
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=22.80 E-value=59 Score=22.82 Aligned_cols=26 Identities=15% Similarity=0.106 Sum_probs=16.1
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhc-C
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVRE-G 93 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~-G 93 (198)
++++|||..||-... ..|.+.|.+. |
T Consensus 2 ~~~~iLivdd~~~~~---~~l~~~L~~~~g 28 (154)
T 2qsj_A 2 SLTVVLIVDDHHLIR---AGAKNLLEGAFS 28 (154)
T ss_dssp -CEEEEEECSCHHHH---HHHHHHHHHHCT
T ss_pred CccEEEEEcCCHHHH---HHHHHHHHhCCC
Confidence 467899998884433 3444555555 5
No 176
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=22.48 E-value=58 Score=28.45 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=25.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
.+|||+|-. . -+ ..+++++++.| ++|+++.+..+.
T Consensus 7 k~ILI~g~g-~--~~-~~i~~a~~~~G-~~vv~v~~~~~~ 41 (461)
T 2dzd_A 7 RKVLVANRG-E--IA-IRVFRACTELG-IRTVAIYSKEDV 41 (461)
T ss_dssp SEEEECSCH-H--HH-HHHHHHHHHHT-CEEEEEECGGGT
T ss_pred cEEEEECCc-H--HH-HHHHHHHHHcC-CEEEEEECCccc
Confidence 379999853 2 23 34778999999 789888776544
No 177
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=22.32 E-value=1.2e+02 Score=24.16 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=26.3
Q ss_pred CCCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEec
Q 029120 64 SSKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP 102 (198)
.+. +|||. ||-+.+=+ +.+.++.|++.|...|.+++-
T Consensus 116 ~~g-~VliV-DDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l 153 (213)
T 1lh0_A 116 LQG-RVMLV-DDVITAGTAIRESMEIIQAHGATLAGVLIS 153 (213)
T ss_dssp CCS-EEEEE-CSCCSSSCHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCC-CEEEE-EecccchHHHHHHHHHHHHCCCeEEEEEEE
Confidence 456 89998 88887644 788899999998433333333
No 178
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=22.03 E-value=67 Score=28.53 Aligned_cols=38 Identities=13% Similarity=0.288 Sum_probs=31.1
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCC
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDK 106 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~q 106 (198)
+|+|-=-||+.---+...++.|+.+| ++|.+++|....
T Consensus 12 kV~ILl~dgf~~~El~~p~dvL~~Ag-~~v~vvS~~~g~ 49 (365)
T 3fse_A 12 KVAILIEQAVEDTEFIIPCNGLKQAG-FEVVVLGSRMNE 49 (365)
T ss_dssp EEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESSSSC
T ss_pred EEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEECCCCc
Confidence 44444457999889999999999999 799999998754
No 179
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=21.97 E-value=63 Score=25.16 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=23.8
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcE
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNV 97 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV 97 (198)
+.-+|||. ||-+.+=+ +.++++.|++.|...|
T Consensus 125 ~gk~VLlV-DDvitTG~Tl~~a~~~L~~~Ga~~V 157 (190)
T 2dy0_A 125 PGDKVLVV-DDLLATGGTIEATVKLIRRLGGEVA 157 (190)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHHTTCEEE
T ss_pred CcCEEEEE-EccccchHHHHHHHHHHHHcCCEEE
Confidence 44578888 88887633 7889999999984433
No 180
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=21.90 E-value=1.1e+02 Score=23.44 Aligned_cols=32 Identities=25% Similarity=0.201 Sum_probs=23.0
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEE
Q 029120 64 SSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVC 100 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~Vv 100 (198)
.+..+||||=- +-|| +++++.|.+.| ++|+++
T Consensus 3 l~~~~vlItGa----sggiG~~~a~~l~~~G-~~V~~~ 35 (247)
T 2hq1_A 3 LKGKTAIVTGS----SRGLGKAIAWKLGNMG-ANIVLN 35 (247)
T ss_dssp TTTCEEEESSC----SSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCcEEEEECC----CchHHHHHHHHHHHCC-CEEEEE
Confidence 45578999932 2344 46888999999 788887
No 181
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=21.58 E-value=1.1e+02 Score=23.56 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=26.1
Q ss_pred CCCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEec
Q 029120 61 NVDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 61 ~~~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP 102 (198)
.+..+..+||||=- +-|| +++++.|.+.| ++|+++.-
T Consensus 6 ~~~~~~~~vlVtGa----sggiG~~la~~l~~~G-~~V~~~~r 43 (255)
T 1fmc_A 6 NLRLDGKCAIITGA----GAGIGKEIAITFATAG-ASVVVSDI 43 (255)
T ss_dssp GGCCTTCEEEETTT----TSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred CCCCCCCEEEEECC----ccHHHHHHHHHHHHCC-CEEEEEcC
Confidence 34466678999932 2354 46889999999 78888764
No 182
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=21.46 E-value=86 Score=25.37 Aligned_cols=29 Identities=21% Similarity=0.163 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGL 94 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~ 94 (198)
.+..|.||=|||+. .....+.+.|++.+.
T Consensus 31 ~~k~VaLTFDDGp~-~~~~~il~iL~~~~v 59 (230)
T 2y8u_A 31 TPNTIALTFDDGPS-EYTPQLLDLLSRYSA 59 (230)
T ss_dssp STTEEEEEEESCCC-TTHHHHHHHHHHTTC
T ss_pred CCCEEEEEecCCch-hhHHHHHHHHHHcCC
Confidence 34569999999998 778888899988774
No 183
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=21.45 E-value=66 Score=22.60 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=17.9
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHh-cCCCcEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVR-EGLYNVH 98 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~-~G~~dV~ 98 (198)
.+++++|||..||-.. ...|.+.|.+ .| ++|+
T Consensus 2 ~~~~~~ILivdd~~~~---~~~l~~~L~~~~~-~~v~ 34 (153)
T 3cz5_A 2 SLSTARIMLVDDHPIV---REGYRRLIERRPG-YAVV 34 (153)
T ss_dssp --CCEEEEEECSCHHH---HHHHHHHHTTSTT-EEEE
T ss_pred CCcccEEEEECCcHHH---HHHHHHHHhhCCC-cEEE
Confidence 3556899999888433 3344445555 45 4444
No 184
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=21.44 E-value=1e+02 Score=25.32 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=28.3
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEec
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP 102 (198)
.||||-==-++.+.....|++.|++.| ++|+|+.-
T Consensus 5 k~IllgvTGaiaa~k~~~ll~~L~~~g-~eV~vv~T 39 (209)
T 3zqu_A 5 ERITLAMTGASGAQYGLRLLDCLVQEE-REVHFLIS 39 (209)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCC-CEEEEEEC
Confidence 467776557788888888999999998 89999864
No 185
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=21.42 E-value=1.1e+02 Score=20.63 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=19.4
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
++++|||.-||-.... .|.+.|...| ++|..
T Consensus 2 ~~~~ilivdd~~~~~~---~l~~~l~~~~-~~v~~ 32 (126)
T 1dbw_A 2 QDYTVHIVDDEEPVRK---SLAFMLTMNG-FAVKM 32 (126)
T ss_dssp CCCEEEEEESSHHHHH---HHHHHHHHTT-CEEEE
T ss_pred CCCEEEEEcCCHHHHH---HHHHHHHhCC-cEEEE
Confidence 4578999988844333 3445566667 56654
No 186
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=21.34 E-value=35 Score=27.78 Aligned_cols=38 Identities=16% Similarity=0.082 Sum_probs=25.0
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCC-CcEEEEecC
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGL-YNVHVCAPQ 103 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~-~dV~VvAP~ 103 (198)
+|+||+.-...-+.-++..|+++|++.+. ++|+++...
T Consensus 8 ~mkIl~v~~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~ 46 (375)
T 3beo_A 8 RLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTA 46 (375)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHTTCTTTEEEEEEECC
T ss_pred CceEEEEecCcHHHHHHHHHHHHHHhCCCCCCeEEEEcC
Confidence 48898886432233466788899987632 677777654
No 187
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=21.31 E-value=75 Score=22.27 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=17.7
Q ss_pred CCCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
....+.+|||..||-.... .|.+.|.+.|
T Consensus 11 ~~~~~~~iLivdd~~~~~~---~l~~~L~~~~ 39 (152)
T 3eul_A 11 PQPEKVRVVVGDDHPLFRE---GVVRALSLSG 39 (152)
T ss_dssp ---CCEEEEEECSSHHHHH---HHHHHHHHHS
T ss_pred CCCceEEEEEEcCCHHHHH---HHHHHHhhCC
Confidence 3466789999999854443 3445566666
No 188
>3ix7_A Uncharacterized protein TTHA0540; unknown function, thermus thermophilus HB8, structural genom 2, protein structure initiative; HET: MSE; 2.15A {Thermus thermophilus}
Probab=21.31 E-value=44 Score=25.88 Aligned_cols=24 Identities=33% Similarity=0.396 Sum_probs=20.0
Q ss_pred eEEEecC---------CCCCCccHHHHHHHHHh
Q 029120 68 VLLVTNG---------DGIESPGLVYLVEALVR 91 (198)
Q Consensus 68 ~ILlTND---------DGi~spGI~aL~~aL~~ 91 (198)
-+|+||| -|+..-.|+.|+.||+.
T Consensus 99 ~~lvTnD~~L~kvA~~~GI~Vl~l~~l~~al~p 131 (134)
T 3ix7_A 99 AALVTNDHALLQMARIYGVKALSIQALAQALRP 131 (134)
T ss_dssp CEEEESCHHHHHHHHHTTCCEEEHHHHHHHTSC
T ss_pred CEEEeCCHHHHHHHHHCCCeEEehHHHHHhhCc
Confidence 3999999 68888888888888864
No 189
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=21.27 E-value=90 Score=24.54 Aligned_cols=40 Identities=25% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
+.-+|||. ||-+.+-+ +.++++.|++.|...|.+++.-.-
T Consensus 94 ~gk~vliV-DDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k 134 (181)
T 2ywu_A 94 HGRDVIVV-EDIVDTGLTLSYLLDYLEARKPASVRVAALLSK 134 (181)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEC
T ss_pred CCCEEEEE-CCeeCChHHHHHHHHHHHhcCCcEEEEEEEEEC
Confidence 44568887 88887644 778889999998667888877543
No 190
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=21.20 E-value=98 Score=21.65 Aligned_cols=26 Identities=12% Similarity=0.127 Sum_probs=16.6
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
.+++|||.-||-.. ...|.+.|.+.|
T Consensus 3 ~~~~ILivddd~~~---~~~l~~~L~~~g 28 (152)
T 3heb_A 3 LSVTIVMIEDDLGH---ARLIEKNIRRAG 28 (152)
T ss_dssp --CEEEEECCCHHH---HHHHHHHHHHTT
T ss_pred CCceEEEEeCCHHH---HHHHHHHHHhCC
Confidence 35799999888433 445556677777
No 191
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=21.02 E-value=1.1e+02 Score=21.02 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=18.4
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 66 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 66 ~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.++|||.-||-... ..|.+.|...| ++|.
T Consensus 3 ~~~ILivdd~~~~~---~~l~~~L~~~g-~~v~ 31 (138)
T 3c3m_A 3 LYTILVVDDSPMIV---DVFVTMLERGG-YRPI 31 (138)
T ss_dssp CCEEEEECSCHHHH---HHHHHHHHHTT-CEEE
T ss_pred cceEEEEeCCHHHH---HHHHHHHHHcC-ceEE
Confidence 46899998874433 34455566667 5554
No 192
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=20.99 E-value=78 Score=25.90 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=25.2
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGL 94 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~ 94 (198)
..+..|.||=|||+. .+...+.+.|++.|.
T Consensus 39 ~~~k~V~LTFDDGp~-~~~~~il~iL~~~~v 68 (254)
T 2iw0_A 39 TQPGLVALTYDDGPF-TFTPQLLDILKQNDV 68 (254)
T ss_dssp SSSSEEEEEEESCSC-TTHHHHHHHHHHHTC
T ss_pred CCCCEEEEEeccCch-hhHHHHHHHHHHcCC
Confidence 344579999999998 788889999999884
No 193
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=20.98 E-value=2.3e+02 Score=22.17 Aligned_cols=37 Identities=22% Similarity=0.220 Sum_probs=25.2
Q ss_pred CCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEecC
Q 029120 63 DSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP~ 103 (198)
..+..+||||=- ...|| +++++.|.+.| ++|+++.-.
T Consensus 19 ~l~~k~vlITGa---sg~GIG~~~a~~l~~~G-~~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAA---AGTGIGSTTARRALLEG-ADVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSC---SSSSHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCCCCEEEEECC---CCCchHHHHHHHHHHCC-CEEEEecCC
Confidence 345567999932 11344 57889999999 788887643
No 194
>1ptf_A Histidine-containing phosphocarrier protein HPR; phosphotransferase; 1.60A {Enterococcus faecalis} SCOP: d.94.1.1 PDB: 1qfr_A 1fu0_A*
Probab=20.96 E-value=65 Score=22.71 Aligned_cols=75 Identities=20% Similarity=0.216 Sum_probs=46.8
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEeee-CCcee-EEEcCchHHHHHHH
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEI-NGATA-YEVSGTPVDCVSLA 145 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~~-~g~~~-~~V~GTPaDCV~la 145 (198)
+|-|+|..|+++.=...|++...+.. .+|+|.. ..+..-+.|+- .+-.... .|..+ ..++|-=++-+.-+
T Consensus 5 ~v~i~~~~GLHARpAa~~v~~a~~f~-s~I~i~~--~~~~vnaKSim-----~lm~L~~~~g~~i~i~~~G~De~~A~~~ 76 (88)
T 1ptf_A 5 EFHIVAETGIHARPATLLVQTASKFN-SDINLEY--KGKSVNLKSIM-----GVMSLGVGQGSDVTITVDGADEAEGMAA 76 (88)
T ss_dssp EEECCCTTCSCHHHHHHHHHHHTTCS-SEEEEEE--TTEEEETTCHH-----HHHHHCCCTTCEEEEEEESTTHHHHHHH
T ss_pred EEEECCCCCcCHHHHHHHHHHHhhCC-CeEEEEE--CCEEEehHhHH-----HHHhcCCCCCCEEEEEEeCCCHHHHHHH
Confidence 47789999999999999999998877 6888875 33434444331 0000000 13332 56777766666666
Q ss_pred Hhccc
Q 029120 146 LSGAL 150 (198)
Q Consensus 146 L~~~l 150 (198)
|..++
T Consensus 77 l~~l~ 81 (88)
T 1ptf_A 77 IVETL 81 (88)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 195
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=20.93 E-value=85 Score=25.44 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCCCc--cHHHHHHHHHhcCCCcEEEEe
Q 029120 65 SKPVLLVTNGDGIESP--GLVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 65 ~~~~ILlTNDDGi~sp--GI~aL~~aL~~~G~~dV~VvA 101 (198)
.+.-|||| ||.... .+...++.|++.| ..|+++.
T Consensus 126 ~~~iIllT--DG~~~d~~~~~~~a~~l~~~g-i~i~~iG 161 (266)
T 4hqo_A 126 IQLVILMT--DGVPNSKYRALEVANKLKQRN-VRLAVIG 161 (266)
T ss_dssp EEEEEEEE--CSCCSCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CeEEEEEc--cCCCCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 45678999 787543 5777888898888 5777774
No 196
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=20.83 E-value=75 Score=24.39 Aligned_cols=40 Identities=10% Similarity=0.115 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcC-CCcEEEEecCCC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREG-LYNVHVCAPQSD 105 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G-~~dV~VvAP~~~ 105 (198)
+.-+|||. ||.+.+=+ +.+.++.|++.| ...|.+++...-
T Consensus 95 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~ 136 (181)
T 1ufr_A 95 TGKAIVLV-DDVLYTGRTARAALDALIDLGRPRRIYLAVLVDR 136 (181)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEEC
T ss_pred CCCEEEEE-ecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcC
Confidence 34578888 88887633 677889999988 678887777654
No 197
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=20.77 E-value=94 Score=21.26 Aligned_cols=26 Identities=12% Similarity=0.185 Sum_probs=16.8
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 029120 65 SKPVLLVTNGDGIESPGLVYLVEALVREG 93 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spGI~aL~~aL~~~G 93 (198)
++++|||..||-.. ...|.+.|.+.|
T Consensus 6 ~~~~ILivdd~~~~---~~~l~~~L~~~g 31 (143)
T 2qvg_A 6 DKVDILYLEDDEVD---IQSVERVFHKIS 31 (143)
T ss_dssp -CCSEEEECCCHHH---HHHHHHHHHHHC
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHHHhC
Confidence 56789999888443 344555666666
No 198
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=20.77 E-value=1.3e+02 Score=20.57 Aligned_cols=32 Identities=9% Similarity=0.137 Sum_probs=19.5
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 63 DSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 63 ~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
....++|||.-||-... ..|.+.|...| ++|.
T Consensus 15 ~~~~~~ilivdd~~~~~---~~l~~~L~~~g-~~v~ 46 (137)
T 2pln_A 15 PRGSMRVLLIEKNSVLG---GEIEKGLNVKG-FMAD 46 (137)
T ss_dssp CTTCSEEEEECSCHHHH---HHHHHHHHHTT-CEEE
T ss_pred CCCCCeEEEEeCCHHHH---HHHHHHHHHcC-cEEE
Confidence 35667899998885433 33444555556 4554
No 199
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=20.73 E-value=80 Score=26.71 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=27.5
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEe
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvA 101 (198)
+.-++||. ||-+.+-| +...++.|++.|...|++++
T Consensus 204 ~Gk~VlIV-DDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~ 240 (284)
T 1u9y_A 204 KDRDVFIV-DDIISTGGTMATAVKLLKEQGAKKIIAAC 240 (284)
T ss_dssp TTCCEEEE-EEECSSSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEE-ecccCchHHHHHHHHHHHHCCCcEEEEEE
Confidence 44568877 89887644 67788999999977787776
No 200
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=20.68 E-value=1.5e+02 Score=23.82 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=25.1
Q ss_pred CCCCeEEEecCCCCCC-ccH-HHHHHHHHhcCCCcEEEEecC
Q 029120 64 SSKPVLLVTNGDGIES-PGL-VYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~s-pGI-~aL~~aL~~~G~~dV~VvAP~ 103 (198)
.+..+||||= -.+ -|| +++++.|.+.| ++|+++.-.
T Consensus 19 l~~k~vlVTG---as~~~gIG~~ia~~l~~~G-~~V~~~~r~ 56 (285)
T 2p91_A 19 LEGKRALITG---VANERSIAYGIAKSFHREG-AQLAFTYAT 56 (285)
T ss_dssp TTTCEEEECC---CSSTTSHHHHHHHHHHHTT-CEEEEEESS
T ss_pred cCCCEEEEEC---CCCCCcHHHHHHHHHHHcC-CEEEEEeCC
Confidence 3445799993 221 455 57889999999 788887643
No 201
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=20.61 E-value=74 Score=23.79 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=23.1
Q ss_pred CCCeEEEecCCCCCC---ccHHHHHHHHHhcCCCcEEEEe
Q 029120 65 SKPVLLVTNGDGIES---PGLVYLVEALVREGLYNVHVCA 101 (198)
Q Consensus 65 ~~~~ILlTNDDGi~s---pGI~aL~~aL~~~G~~dV~VvA 101 (198)
.+.-|||| ||... .-+...++.|++.| ..|+++.
T Consensus 111 ~~~iillT--DG~~~~~~~~~~~~~~~~~~~g-i~i~~ig 147 (198)
T 1n3y_A 111 AKILIVIT--DGKKEGDSLDYKDVIPMADAAG-IIRYAIG 147 (198)
T ss_dssp EEEEEEEE--SSCCBSCSSCHHHHHHHHHHTT-CEEEEEE
T ss_pred ceEEEEEC--CCCCCCCcccHHHHHHHHHHCC-CEEEEEE
Confidence 44568888 67644 23466778888888 5777774
No 202
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=20.57 E-value=55 Score=28.30 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=16.5
Q ss_pred cHHHHHHHHHhcCCCcEEE-EecCC
Q 029120 81 GLVYLVEALVREGLYNVHV-CAPQS 104 (198)
Q Consensus 81 GI~aL~~aL~~~G~~dV~V-vAP~~ 104 (198)
||+.|++.+++.|. ++-+ ..|..
T Consensus 75 Gl~~l~~~ih~~Gl-k~Giw~~~~~ 98 (362)
T 1uas_A 75 GIKALADYVHAKGL-KLGIYSDAGS 98 (362)
T ss_dssp CHHHHHHHHHHTTC-EEEEEEESSS
T ss_pred cHHHHHHHHHHCCC-EeEEEeeCCC
Confidence 79999999999984 4322 34543
No 203
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=20.50 E-value=2.3e+02 Score=22.88 Aligned_cols=39 Identities=28% Similarity=0.319 Sum_probs=22.8
Q ss_pred CCCCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 62 VDSSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
.+.++++||||=--|. -| +.|++.|.+.| ++|+++.-..
T Consensus 15 ~~~~~~~vlVtGatG~--iG-~~l~~~L~~~G-~~V~~~~r~~ 53 (347)
T 4id9_A 15 VPRGSHMILVTGSAGR--VG-RAVVAALRTQG-RTVRGFDLRP 53 (347)
T ss_dssp ------CEEEETTTSH--HH-HHHHHHHHHTT-CCEEEEESSC
T ss_pred cccCCCEEEEECCCCh--HH-HHHHHHHHhCC-CEEEEEeCCC
Confidence 3566688999933332 22 45788888888 7998886543
No 204
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=20.50 E-value=1.5e+02 Score=20.10 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=19.6
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEE
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVH 98 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~ 98 (198)
.++++|||.-||-.. ...+.+.|...| ++|.
T Consensus 5 ~~~~~ILivdd~~~~---~~~l~~~L~~~g-~~v~ 35 (136)
T 1dcf_A 5 FTGLKVLVMDENGVS---RMVTKGLLVHLG-CEVT 35 (136)
T ss_dssp CTTCEEEEECSCHHH---HHHHHHHHHHTT-CEEE
T ss_pred cCCCeEEEEeCCHHH---HHHHHHHHHHcC-CeEE
Confidence 356889999887433 334455566677 5665
No 205
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=20.47 E-value=81 Score=24.48 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=22.7
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLY 95 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~ 95 (198)
+.-+|||. ||.+.+=+ +.++++.|++.|..
T Consensus 116 ~gk~VLLV-DDVitTG~Tl~aa~~~L~~~Ga~ 146 (186)
T 1l1q_A 116 PHDVVLLH-DDVLATGGTLLAAIELCETAGVK 146 (186)
T ss_dssp TTCCEEEE-EEEESSSHHHHHHHHHHHHTTCC
T ss_pred CcCEEEEE-ecccccHHHHHHHHHHHHHcCCC
Confidence 44568888 89887633 78889999999854
No 206
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.45 E-value=1.2e+02 Score=19.37 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=18.5
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEE
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHV 99 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~V 99 (198)
++|||..||-.. ...|.+.|...| ++|..
T Consensus 2 ~~iliv~~~~~~---~~~l~~~l~~~g-~~v~~ 30 (119)
T 2j48_A 2 GHILLLEEEDEA---ATVVCEMLTAAG-FKVIW 30 (119)
T ss_dssp CEEEEECCCHHH---HHHHHHHHHHTT-CEEEE
T ss_pred CEEEEEeCCHHH---HHHHHHHHHhCC-cEEEE
Confidence 679999887333 344556677777 56654
No 207
>3le1_A Phosphotransferase system, HPR-related proteins; HPR PTS phosphotransfer, kinase; 1.51A {Thermoanaerobacter tengcongensis} SCOP: d.94.1.0 PDB: 3le3_A 3lnw_A 3lfg_A 3le5_A
Probab=20.45 E-value=53 Score=23.22 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=48.2
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCCCcccccccCCCCCeEEEEee-eCCcee-EEEcCchHHHHHHH
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE-INGATA-YEVSGTPVDCVSLA 145 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~qSg~g~siTl~~pl~v~~v~-~~g~~~-~~V~GTPaDCV~la 145 (198)
++-|+|..|+++.=...|++...+.. .+|+|.. .++..-++|+- .+-... ..|..+ ..++|-=++-+.-+
T Consensus 5 ~~~i~n~~GLHARpAa~lv~~a~~f~-s~I~i~~--~~~~vnaKSim-----~lm~Lg~~~G~~i~i~a~G~De~~A~~~ 76 (88)
T 3le1_A 5 TIEIKNKTGLHARPAALFVQTASKFS-SQIWVEK--DNKKVNAKSIM-----GIMSLGVSQGNVVKLSAEGDDEEEAIKA 76 (88)
T ss_dssp EEECCSTTCSSHHHHHHHHHHHTTSS-SEEEEEE--TTEEEETTCHH-----HHHHHCCCTTCEEEEEEESTTHHHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHHhhCC-CeEEEEE--CCEEEehHhHH-----HHHhcCCCCCCEEEEEEeCCCHHHHHHH
Confidence 57889999999999999999998887 6888873 33444444331 000000 023332 56788777777777
Q ss_pred Hhccc
Q 029120 146 LSGAL 150 (198)
Q Consensus 146 L~~~l 150 (198)
|..++
T Consensus 77 l~~l~ 81 (88)
T 3le1_A 77 LVDLI 81 (88)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 208
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=20.43 E-value=1.4e+02 Score=23.28 Aligned_cols=36 Identities=25% Similarity=0.168 Sum_probs=25.8
Q ss_pred CCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCCcEEEEec
Q 029120 62 VDSSKPVLLVTNGDGIESPGL-VYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 62 ~~~~~~~ILlTNDDGi~spGI-~aL~~aL~~~G~~dV~VvAP 102 (198)
+..+..+||||=- +-|| +++++.|.+.| ++|+++.-
T Consensus 17 ~~~~~k~vlItGa----sggiG~~la~~l~~~G-~~v~~~~r 53 (274)
T 1ja9_A 17 KPLAGKVALTTGA----GRGIGRGIAIELGRRG-ASVVVNYG 53 (274)
T ss_dssp CTTTTCEEEETTT----TSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCCCEEEEeCC----CchHHHHHHHHHHHCC-CEEEEEcC
Confidence 4556678999933 2354 56888999999 78888764
No 209
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=20.38 E-value=91 Score=26.31 Aligned_cols=36 Identities=8% Similarity=0.077 Sum_probs=27.0
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCC
Q 029120 67 PVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQS 104 (198)
Q Consensus 67 ~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~ 104 (198)
.+|||..+.- ...|...|.++|++.| ++|.+.-+..
T Consensus 5 ~~vLiV~g~~-~~~~a~~l~~aL~~~g-~~V~~i~~~~ 40 (259)
T 3rht_A 5 TRVLYCGDTS-LETAAGYLAGLMTSWQ-WEFDYIPSHV 40 (259)
T ss_dssp -CEEEEESSC-TTTTHHHHHHHHHHTT-CCCEEECTTS
T ss_pred ceEEEECCCC-chhHHHHHHHHHHhCC-ceEEEecccc
Confidence 5799995443 3458899999999999 6898876654
No 210
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=20.38 E-value=71 Score=24.78 Aligned_cols=38 Identities=11% Similarity=-0.018 Sum_probs=27.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEEecC
Q 029120 65 SKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVCAPQ 103 (198)
Q Consensus 65 ~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~VvAP~ 103 (198)
+.-+|||. ||-+.+=+ +.++++.|++.|...|.+++..
T Consensus 121 ~gk~VLlV-DDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~ 159 (187)
T 1g2q_A 121 AGSNVIIV-DDIIATGGSAAAAGELVEQLEANLLEYNFVM 159 (187)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CcCEEEEE-CCCcccHHHHHHHHHHHHHcCCeEEEEEEEE
Confidence 44578888 88887633 7788899999996566666664
No 211
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=20.30 E-value=1.1e+02 Score=22.59 Aligned_cols=35 Identities=37% Similarity=0.423 Sum_probs=22.7
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEec
Q 029120 64 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAP 102 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP 102 (198)
.+.++|||.-||-.... .|.+.|...| ++|+.++.
T Consensus 10 ~~~~~iLivdd~~~~~~---~l~~~L~~~g-~~v~~~~~ 44 (196)
T 1qo0_D 10 LRELQVLVLNPPGEVSD---ALVLQLIRIG-CSVRQCWP 44 (196)
T ss_dssp GGGCEEEEESCTTHHHH---HHHHHHHHHT-CEEEEECS
T ss_pred hcCCeEEEEcCChhHHH---HHHHHHHHcC-CeEEEecC
Confidence 34578999999854443 4445566677 67765544
No 212
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=20.28 E-value=1e+02 Score=26.55 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=29.1
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCCcEEEEecCCC
Q 029120 68 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 68 ~ILlTNDDGi~spGI~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
-||+ -||++.--+...++.|+++| ++|.+++|...
T Consensus 16 ~ill--~dg~e~~E~~~~~~~l~~ag-~~v~~vs~~~~ 50 (396)
T 3uk7_A 16 LILC--GDYMEDYEVMVPFQALQAFG-ITVHTVCPGKK 50 (396)
T ss_dssp EEEC--CTTEEHHHHHHHHHHHHHTT-CEEEEECTTCC
T ss_pred EEEe--CCCccHHHHHHHHHHHHHCC-CEEEEEcCCCc
Confidence 3455 48998888999999999999 79999999743
No 213
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=20.24 E-value=56 Score=28.30 Aligned_cols=21 Identities=29% Similarity=0.295 Sum_probs=18.7
Q ss_pred CccHHHHHHHHHhcCCCcEEEE
Q 029120 79 SPGLVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 79 spGI~aL~~aL~~~G~~dV~Vv 100 (198)
-|+.+.|++.|++.| ++|+||
T Consensus 145 ~~~~~~l~~~l~~~G-~~v~iv 165 (327)
T 4as2_A 145 FSGQRELYNKLMENG-IEVYVI 165 (327)
T ss_dssp CHHHHHHHHHHHHTT-CEEEEE
T ss_pred CHHHHHHHHHHHHCC-CEEEEE
Confidence 488999999999999 788887
No 214
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=20.11 E-value=77 Score=24.59 Aligned_cols=36 Identities=25% Similarity=0.172 Sum_probs=25.2
Q ss_pred CCCCeEEEecCCCCCCcc-HHHHHHHHHhcCCCcEEEE
Q 029120 64 SSKPVLLVTNGDGIESPG-LVYLVEALVREGLYNVHVC 100 (198)
Q Consensus 64 ~~~~~ILlTNDDGi~spG-I~aL~~aL~~~G~~dV~Vv 100 (198)
.+.-+|||. ||-+.+=+ +.+.++.|++.|...|.++
T Consensus 112 ~~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~v~~~ 148 (180)
T 2p1z_A 112 VVGKKVLVV-EDTTTTGNSPLTAVKALREAGAEVVGVA 148 (180)
T ss_dssp CTTCEEEEE-EEECSSSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCcCEEEEE-EeccCCcHHHHHHHHHHHHcCCeEEEEE
Confidence 345678888 88887633 7788899999985444333
No 215
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=20.04 E-value=1e+02 Score=25.43 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=25.3
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCCcEEEEecCCC
Q 029120 67 PVLLVTNGDGIESPG----LVYLVEALVREGLYNVHVCAPQSD 105 (198)
Q Consensus 67 ~~ILlTNDDGi~spG----I~aL~~aL~~~G~~dV~VvAP~~~ 105 (198)
|||++....-...-| ...|+++|.+. |+|.|+.....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~--~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA--HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT--SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc--CCeEEEeecCC
Confidence 678776543222233 56788888876 89999988765
Done!