Query 029123
Match_columns 198
No_of_seqs 177 out of 1450
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 12:36:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029123.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029123hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 100.0 4.8E-36 1.6E-40 274.0 18.3 159 30-197 19-182 (553)
2 1xff_A D-fructose-6-, glucosam 100.0 5.3E-33 1.8E-37 229.5 18.9 162 30-198 15-215 (240)
3 1ao0_A Glutamine phosphoribosy 100.0 3E-33 1E-37 250.4 17.7 162 31-198 16-218 (459)
4 1ecf_A Glutamine phosphoribosy 100.0 4.2E-31 1.4E-35 239.0 19.5 168 30-198 15-233 (504)
5 2bpl_A Glucosamine--fructose-6 100.0 5E-30 1.7E-34 236.4 17.9 162 30-198 15-215 (608)
6 1jgt_A Beta-lactam synthetase; 100.0 3.3E-28 1.1E-32 220.5 13.4 119 69-197 57-195 (513)
7 1q15_A CARA; CMPR, (2S,5S)-5-c 99.9 2.7E-28 9.3E-33 220.5 6.9 135 53-198 26-189 (503)
8 3mdn_A Glutamine aminotransfer 99.9 2.2E-25 7.5E-30 187.4 10.8 137 52-198 80-248 (274)
9 1te5_A Conserved hypothetical 99.8 4.8E-21 1.6E-25 159.6 4.2 141 51-198 69-247 (257)
10 1ea0_A Glutamate synthase [NAD 99.8 2.9E-18 1E-22 168.1 12.9 139 52-198 201-394 (1479)
11 1ofd_A Ferredoxin-dependent gl 99.7 1.5E-17 5.1E-22 163.4 13.4 139 52-198 197-393 (1520)
12 1vk9_A Conserved hypothetical 45.2 4.2 0.00014 30.5 -0.1 26 132-160 27-52 (151)
13 2h4p_B MENT, heterochromatin-a 28.7 72 0.0025 17.0 3.6 14 132-145 8-21 (34)
14 4afx_B Protein Z dependent pro 26.2 85 0.0029 17.0 3.6 15 131-145 8-22 (36)
15 2riv_B Thyroxine-binding globu 24.2 1E+02 0.0034 17.2 3.8 15 131-145 12-26 (40)
16 3ndd_B Alpha-1-antitrypsin; se 22.5 93 0.0032 16.9 3.1 14 131-144 8-21 (36)
17 2xn6_B Thyroxine-binding globu 22.5 1E+02 0.0035 16.6 3.8 14 132-145 8-21 (35)
18 3qqz_A Putative uncharacterize 21.4 3E+02 0.01 21.6 7.7 39 127-168 21-59 (255)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=100.00 E-value=4.8e-36 Score=273.98 Aligned_cols=159 Identities=20% Similarity=0.325 Sum_probs=143.3
Q ss_pred CHHHHHHHhHhcCCCCcceEEeCCcEEEEeecCC--CCCCCCcceEecCCcEEEEEEEEEechHhHHHHhcC---CCCCC
Q 029123 30 HPEEIFNEFLISQSSNAFSINFGNAAALAYVPPE--NPNSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQYGL---SKGSN 104 (198)
Q Consensus 30 ~~~~~~~~l~~rgpd~~~~~~~~~~~~lg~~r~~--~~~~~~qP~~~~~~~~~~v~nG~i~N~~~L~~~l~~---~~~~~ 104 (198)
...+|++.|+|||||+++++ ..++++|||+||+ +...+.||+...+++++++|||+|||+.+||++|.. +.+.+
T Consensus 19 ~~~~m~~~l~hRGpD~~G~~-~~~~~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~~eLr~~L~~~~~f~s~s 97 (553)
T 1ct9_A 19 KALELSRLMRHRGPDWSGIY-ASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGS 97 (553)
T ss_dssp HHHHHHHTTGGGCBTEEEEE-ECSSEEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTHHHHHHHHTTTSCCCSCC
T ss_pred HHHHHHHHHhccCCCcccEE-EECCEEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECHHHHHHHHhccCccCCCC
Confidence 45689999999999999999 5567999999999 434689999887788999999999999999999863 78999
Q ss_pred HHHHHHHHHHHHHhcCCchHHHhhcccccceEEEEEECCCCEEEEEEcCCCCceEEEEEECCceEEEEechhhHHhhcCc
Q 029123 105 EAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCKAGTIFAALDADEGVRLFWGIAADGSVVISDNLELIKASCAK 184 (198)
Q Consensus 105 D~e~i~~~y~~~~~~g~~~~~~~l~~L~G~Fafvi~D~~~~~l~~arD~~G~~PL~~g~~~~g~~~faSe~~~L~~~~~~ 184 (198)
|+|+|+++|+ +||. +++++|+|+|||++||..+++++++||++|++||||+...++.++||||.++|...+ +
T Consensus 98 DtEvil~l~~---~~g~----~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~~-~ 169 (553)
T 1ct9_A 98 DCEVILALYQ---EKGP----EFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-R 169 (553)
T ss_dssp TTHHHHHHHH---HHTT----TTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTTC-S
T ss_pred cHHHHHHHHH---HHHH----HHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhhc-C
Confidence 9999999999 7896 899999999999999998899999999999999999985457899999999998777 5
Q ss_pred ceEEeCCCcEEEe
Q 029123 185 SFAPFPAGMSSAI 197 (198)
Q Consensus 185 ~~~~~ppG~~~~~ 197 (198)
.+.++|||+++.+
T Consensus 170 ~i~~l~pG~~~~~ 182 (553)
T 1ct9_A 170 TIKEFPAGSYLWS 182 (553)
T ss_dssp EEEECCTTEEEET
T ss_pred CEEEECCCeEEEE
Confidence 6999999999875
No 2
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=100.00 E-value=5.3e-33 Score=229.52 Aligned_cols=162 Identities=14% Similarity=0.129 Sum_probs=136.9
Q ss_pred CHHHHHHHhHhcCCCCcceE-Ee--------------------------CCcEEEEeecCCCC----CCCCcceEecCCc
Q 029123 30 HPEEIFNEFLISQSSNAFSI-NF--------------------------GNAAALAYVPPENP----NSVSQRWFCGLHN 78 (198)
Q Consensus 30 ~~~~~~~~l~~rgpd~~~~~-~~--------------------------~~~~~lg~~r~~~~----~~~~qP~~~~~~~ 78 (198)
....|+..|.|||||+.+++ .. .++++|||+||++. ..++||+.. ++
T Consensus 15 ~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~--~~ 92 (240)
T 1xff_A 15 ILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS--EH 92 (240)
T ss_dssp HHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESCHHHHHHHHHHSCCCCSEEEEEEECCSSSCSSTTTSSCEEE--TT
T ss_pred HHHHHHHHHHhcCCCcCCEEEEecCCcEEEEEcCCcHHHHHhhhhcccCCccEEEEEEeccCCCCCCcccCCCccc--CC
Confidence 46789999999999999987 43 36789999999922 368999876 78
Q ss_pred EEEEEEEEEechHhHHHHhcC----CCCCCHHHHHHHHHHHHHhcCCch---HHHhhcccccceEEEEEECC-CCEEEEE
Q 029123 79 VYCMFMGSLNNLSSLNKQYGL----SKGSNEAMFVIEAYRTLRDRGPYP---AHQVLRDLDGSFGFVLYDCK-AGTIFAA 150 (198)
Q Consensus 79 ~~~v~nG~i~N~~~L~~~l~~----~~~~~D~e~i~~~y~~~~~~g~~~---~~~~l~~L~G~Fafvi~D~~-~~~l~~a 150 (198)
++++|||+|+|+.+||++|.. +.+.+|+|+++++|+...+.|... +.+++++|+|+|||++||.. .++++++
T Consensus 93 ~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi~~l~~~~~~~g~~~~~ai~~~~~~l~G~fa~~i~d~~~~~~l~~~ 172 (240)
T 1xff_A 93 IVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAA 172 (240)
T ss_dssp EEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHHHHHHHHHHHTSSCHHHHHHHHGGGCCEEEEEEEEETTCTTCEEEE
T ss_pred EEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcccceEEEEEecCCCCEEEEE
Confidence 999999999999999999852 789999999999998432224321 25799999999999999985 6899999
Q ss_pred EcCCCCceEEEEEECCceEEEEechhhHHhhcCcceEEeCCCcEEEeC
Q 029123 151 LDADEGVRLFWGIAADGSVVISDNLELIKASCAKSFAPFPAGMSSAIN 198 (198)
Q Consensus 151 rD~~G~~PL~~g~~~~g~~~faSe~~~L~~~~~~~~~~~ppG~~~~~~ 198 (198)
||+ +||||+.. ++.++||||.++|...+.+ +.++|||++++++
T Consensus 173 Rd~---~PL~~~~~-~~~~~~aSE~~al~~~~~~-~~~l~pG~~~~i~ 215 (240)
T 1xff_A 173 RSG---SPLVIGLG-MGENFIASDQLALLPVTRR-FIFLEEGDIAEIT 215 (240)
T ss_dssp EEB---SCCEEEEC-SSCEEEESSGGGTTTTCSE-EEECCTTCEEEEC
T ss_pred ECC---CceEEEEe-CCEEEEEECHHHHHhhCCe-EEEECCCEEEEEE
Confidence 997 99999997 5789999999999877755 8999999999874
No 3
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=100.00 E-value=3e-33 Score=250.41 Aligned_cols=162 Identities=15% Similarity=0.149 Sum_probs=139.2
Q ss_pred HHHHHHHhHhcCCCCcceEEeC--------------------------CcEEEEeecCCCC----CCCCcceEe---cCC
Q 029123 31 PEEIFNEFLISQSSNAFSINFG--------------------------NAAALAYVPPENP----NSVSQRWFC---GLH 77 (198)
Q Consensus 31 ~~~~~~~l~~rgpd~~~~~~~~--------------------------~~~~lg~~r~~~~----~~~~qP~~~---~~~ 77 (198)
...|+..|+|||||+.+++..+ ++++|||+||++. ..++||+.. .++
T Consensus 16 ~~~~l~~L~hRG~D~~Gi~~~~~~~~~~~k~~g~v~~~~~~~~l~~l~g~~~igH~R~at~g~~~~~n~qP~~~~~~~~g 95 (459)
T 1ao0_A 16 TYYGLHSLQHRGQEGAGIVATDGEKLTAHKGQGLITEVFQNGELSKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNNG 95 (459)
T ss_dssp HHHHHHHTGGGCCSEEEEEEECSSCEEEEEEESCHHHHTTSSCTTTCCBSEEEEEEECCC----CGGGSSSEEEBCTTTC
T ss_pred HHHHHHHHHhcCCCcCCEEEEeCCeEEEEecCCcHhhhcchhhhhccCCCEEEEEEecCCCCCCCccCCCCceeccCCCC
Confidence 4589999999999999987553 4689999999932 258999987 457
Q ss_pred cEEEEEEEEEechHhHHHHhcC----CCCCCHHHHHHHHHHHHHhcCCc----hHHHhhcccccceEEEEEECCCCEEEE
Q 029123 78 NVYCMFMGSLNNLSSLNKQYGL----SKGSNEAMFVIEAYRTLRDRGPY----PAHQVLRDLDGSFGFVLYDCKAGTIFA 149 (198)
Q Consensus 78 ~~~~v~nG~i~N~~~L~~~l~~----~~~~~D~e~i~~~y~~~~~~g~~----~~~~~l~~L~G~Fafvi~D~~~~~l~~ 149 (198)
+++++|||+|+|+.+||++|.. +.+.+|+|+++++|. +++.. ...+++++|+|+|||++|| .+++++
T Consensus 96 ~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEvi~~l~~---~~~~~~~~~a~~~~~~~l~G~fa~~i~d--~~~l~~ 170 (459)
T 1ao0_A 96 SLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIK---RSGHFTLKDQIKNSLSMLKGAYAFLIMT--ETEMIV 170 (459)
T ss_dssp CEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHHHHHHHH---TCCCSSHHHHHHHHHTTCCEEEEEEEEC--SSEEEE
T ss_pred cEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHHHHHHHH---HhccCCHHHHHHHHHHhhccceEEEEEe--CCEEEE
Confidence 8999999999999999999852 789999999999999 67631 1258999999999999999 479999
Q ss_pred EEcCCCCceEEEEEECCceEEEEechhhHHhhcCcceEEeCCCcEEEeC
Q 029123 150 ALDADEGVRLFWGIAADGSVVISDNLELIKASCAKSFAPFPAGMSSAIN 198 (198)
Q Consensus 150 arD~~G~~PL~~g~~~~g~~~faSe~~~L~~~~~~~~~~~ppG~~~~~~ 198 (198)
+||++|++||||+.. ++.++||||.++|.....+.+.++||||+++++
T Consensus 171 ~RD~~G~rPL~~~~~-~~~~~~ASE~~al~~~~~~~i~~l~pG~~~~i~ 218 (459)
T 1ao0_A 171 ALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIIN 218 (459)
T ss_dssp EECTTCCSCCEEEEE-TTEEEEESSTHHHHHHTCEEEEECCTTEEEEEE
T ss_pred EECCCCCCCeEEEec-CCEEEEEECchHHhcCCCceEEEECCCEEEEEE
Confidence 999999999999998 578999999999987655679999999999873
No 4
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.97 E-value=4.2e-31 Score=238.97 Aligned_cols=168 Identities=11% Similarity=0.076 Sum_probs=139.1
Q ss_pred CHHHHHHHhHhcCCCCcceEEeC---------------------------CcEEEEeecCCCC----CCCCcceEecC-C
Q 029123 30 HPEEIFNEFLISQSSNAFSINFG---------------------------NAAALAYVPPENP----NSVSQRWFCGL-H 77 (198)
Q Consensus 30 ~~~~~~~~l~~rgpd~~~~~~~~---------------------------~~~~lg~~r~~~~----~~~~qP~~~~~-~ 77 (198)
....++..|+|||||+.+++..+ ++++|||+||++. ..++||++... .
T Consensus 15 ~l~~~l~~LqhRG~D~aGi~~~~~~~~~~~~k~~g~v~~vf~~~~~~~l~g~~~igH~R~sT~G~~~~~n~QP~~~~~~~ 94 (504)
T 1ecf_A 15 SIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPY 94 (504)
T ss_dssp HHHHHHHHTGGGCCSEEEEEEECTTSCEEEEEEESCHHHHCCHHHHHHCCSSEEEEEEECCBTTBCTTSCCSCEEECSSS
T ss_pred HHHHHHHHHHhcCCCcceEEEEcCCCcEEEEecCCchhhhcCccccccCCCCEEEEEEccCcCCCCCccccCCeEeccCC
Confidence 46789999999999999998664 4689999999921 36899998643 5
Q ss_pred cEEEEEEEEEechHhHHHHhc-----CCCCCCHHHHHHHHHHHHH-hcCC-----c----hHHHhhcccccceEEEEEEC
Q 029123 78 NVYCMFMGSLNNLSSLNKQYG-----LSKGSNEAMFVIEAYRTLR-DRGP-----Y----PAHQVLRDLDGSFGFVLYDC 142 (198)
Q Consensus 78 ~~~~v~nG~i~N~~~L~~~l~-----~~~~~~D~e~i~~~y~~~~-~~g~-----~----~~~~~l~~L~G~Fafvi~D~ 142 (198)
+++++|||+|+|+.+||++|. .+.+.+|+|+++++|.... ++|. . .+.+++++|+|+|||++|+.
T Consensus 95 ~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEvi~~l~~~~~~~~g~~~~~~~~~~~a~~~~~~~l~G~fa~v~~~~ 174 (504)
T 1ecf_A 95 GITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMII 174 (504)
T ss_dssp CEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHTTCCSSSCCHHHHHHHHHHHHHHCCEEEEEEEEET
T ss_pred CEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHhccccccccccHHHHHHHhhhhcCccceEEEEEc
Confidence 699999999999999999884 2789999999999998432 2342 1 12478999999999999985
Q ss_pred CCCEEEEEEcCCCCceEEEEEEC--C--ceEEEEechhhHHhhcCcceEEeCCCcEEEeC
Q 029123 143 KAGTIFAALDADEGVRLFWGIAA--D--GSVVISDNLELIKASCAKSFAPFPAGMSSAIN 198 (198)
Q Consensus 143 ~~~~l~~arD~~G~~PL~~g~~~--~--g~~~faSe~~~L~~~~~~~~~~~ppG~~~~~~ 198 (198)
. ++++++||++|+|||||+... + +.++||||.++|.....+.+++++|||+++++
T Consensus 175 ~-~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~ASE~~al~~~~~~~v~~l~PGe~v~i~ 233 (504)
T 1ecf_A 175 G-HGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYIT 233 (504)
T ss_dssp T-TEEEEEECTTCCSCCEEEEEECSSSCEEEEEESSTHHHHHHTCEEEEECCTTEEEEEE
T ss_pred C-CeEEEEECCCCCCceEEeecccCCCceEEEEEeCchHhhccCccEEEECCCCeEEEEe
Confidence 3 589999999999999999872 3 37999999999988766779999999999874
No 5
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.97 E-value=5e-30 Score=236.44 Aligned_cols=162 Identities=14% Similarity=0.164 Sum_probs=138.6
Q ss_pred CHHHHHHHhHhcCCCCcceEEe-C--------------------------CcEEEEeecCCC---C-CCCCcceEecCCc
Q 029123 30 HPEEIFNEFLISQSSNAFSINF-G--------------------------NAAALAYVPPEN---P-NSVSQRWFCGLHN 78 (198)
Q Consensus 30 ~~~~~~~~l~~rgpd~~~~~~~-~--------------------------~~~~lg~~r~~~---~-~~~~qP~~~~~~~ 78 (198)
...+|++.|.|||||+.+++.. + ++++|||+||++ + ..++||+.. ++
T Consensus 15 ~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~l~~~l~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~--~~ 92 (608)
T 2bpl_A 15 ILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS--EH 92 (608)
T ss_dssp HHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESSHHHHHHHHHHSCCCCSEEEEEEECCCSSSCCGGGCSCEEE--TT
T ss_pred HHHHHHHHHHhcCCCcCceEEEecCCcEEEEeCCCcHHHHHHHhhccCCCCCEEEEEEccCCCCCCCccCCCCccC--CC
Confidence 4678999999999999998855 1 568999999992 2 267899987 78
Q ss_pred EEEEEEEEEechHhHHHHhcC----CCCCCHHHHHHHHHHHHHhcCCc---hHHHhhcccccceEEEEEECCC-CEEEEE
Q 029123 79 VYCMFMGSLNNLSSLNKQYGL----SKGSNEAMFVIEAYRTLRDRGPY---PAHQVLRDLDGSFGFVLYDCKA-GTIFAA 150 (198)
Q Consensus 79 ~~~v~nG~i~N~~~L~~~l~~----~~~~~D~e~i~~~y~~~~~~g~~---~~~~~l~~L~G~Fafvi~D~~~-~~l~~a 150 (198)
++++|||+|+|+.+||++|.. +.+.+|+|+++++|+...++|.. .+.+++++|+|+|||++||... ++++++
T Consensus 93 ~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEvi~~l~~~~~~~g~~~~~av~~~~~~l~G~fa~~i~d~~~~~~l~~a 172 (608)
T 2bpl_A 93 IVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAA 172 (608)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHHHHHHHHHHHTTCCCHHHHHHHHGGGCCSSEEEEEEETTCTTCEEEE
T ss_pred EEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcCceEEEEEecCCCCEEEEE
Confidence 999999999999999999852 88999999999999854334742 1257999999999999999887 899999
Q ss_pred EcCCCCceEEEEEECCceEEEEechhhHHhhcCcceEEeCCCcEEEeC
Q 029123 151 LDADEGVRLFWGIAADGSVVISDNLELIKASCAKSFAPFPAGMSSAIN 198 (198)
Q Consensus 151 rD~~G~~PL~~g~~~~g~~~faSe~~~L~~~~~~~~~~~ppG~~~~~~ 198 (198)
||+ +||||+.. ++.++||||.++|...+ +.+.+++||++++++
T Consensus 173 Rd~---~PL~~g~~-~~~~~~aSe~~al~~~~-~~~~~l~~G~i~~i~ 215 (608)
T 2bpl_A 173 RSG---SPLVIGLG-MGENFIASDQLALLPVT-RRFIFLEEGDIAEIT 215 (608)
T ss_dssp EEB---SCCEEEEC-SSCEEEESSGGGTTTTC-CEEEECCTTCEEEEC
T ss_pred ECC---CceEEEEe-CCeEEEEechHHHHhcC-CeEEEECCCeEEEEE
Confidence 997 99999998 57799999999998777 458999999999874
No 6
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.95 E-value=3.3e-28 Score=220.47 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=106.0
Q ss_pred CcceEecC----CcEEEEEEEEEechHhHHHHhcC-CCCCCHHHHHHHHHHHHHhcCCchHHHhhcccccceEEEEEECC
Q 029123 69 SQRWFCGL----HNVYCMFMGSLNNLSSLNKQYGL-SKGSNEAMFVIEAYRTLRDRGPYPAHQVLRDLDGSFGFVLYDCK 143 (198)
Q Consensus 69 ~qP~~~~~----~~~~~v~nG~i~N~~~L~~~l~~-~~~~~D~e~i~~~y~~~~~~g~~~~~~~l~~L~G~Fafvi~D~~ 143 (198)
+||++... ++++++|||+|||+.+||++|+. +.+.+|+|+|+++|+ +||. +++++|+|+|||++||..
T Consensus 57 ~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEvil~l~~---~~g~----~~~~~l~G~fA~~i~d~~ 129 (513)
T 1jgt_A 57 APDRAVARSLTGAPTTAVLAGEIYNRDELLSVLPAGPAPEGDAELVLRLLE---RYDL----HAFRLVNGRFATVVRTGD 129 (513)
T ss_dssp CGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHHHHHHHH---HHGG----GGGGTCCEEEEEEEEETT
T ss_pred CCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHHHHHHHH---HHhH----HhHhhcCeeEEEEEEECC
Confidence 68876543 78999999999999999999853 789999999999999 7896 899999999999999964
Q ss_pred CCEEEEEEcCCCCceEEEEEECCceEEEEechhhHHhhc---------------CcceEEeCCCcEEEe
Q 029123 144 AGTIFAALDADEGVRLFWGIAADGSVVISDNLELIKASC---------------AKSFAPFPAGMSSAI 197 (198)
Q Consensus 144 ~~~l~~arD~~G~~PL~~g~~~~g~~~faSe~~~L~~~~---------------~~~~~~~ppG~~~~~ 197 (198)
+++++||++|++||||+.. ++.++||||.++|...+ .+.+..+||||++.+
T Consensus 130 --~l~~aRD~~G~kPLyy~~~-~~~~~faSe~~aL~~~~~~~~~~l~~~~~~t~~~~i~~l~pG~~l~i 195 (513)
T 1jgt_A 130 --RVLLATDHAGSVPLYTCVA-PGEVRASTEAKALAAHRDPKGFPLADARRVAGLTGVYQVPAGAVMDI 195 (513)
T ss_dssp --EEEEEECTTCCSCCEEEEE-TTEEEEESCHHHHHTC--CCCCCCTTSEECSSCSSCEECCTTEEEEE
T ss_pred --EEEEEECCCCCceeEEEEe-CCEEEEcchHHHHHhccCcccccccCCCccccccceEEcCCCcEEEE
Confidence 4999999999999999988 58899999999998766 267999999999876
No 7
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.95 E-value=2.7e-28 Score=220.52 Aligned_cols=135 Identities=14% Similarity=0.113 Sum_probs=117.8
Q ss_pred CcEEEEeecCC-CCCCCCcceEecCCcEEEEEEEEEechH---hHHHHhcC-CCCCCHHHHHHHHHHHHHhcCCchHHHh
Q 029123 53 NAAALAYVPPE-NPNSVSQRWFCGLHNVYCMFMGSLNNLS---SLNKQYGL-SKGSNEAMFVIEAYRTLRDRGPYPAHQV 127 (198)
Q Consensus 53 ~~~~lg~~r~~-~~~~~~qP~~~~~~~~~~v~nG~i~N~~---~L~~~l~~-~~~~~D~e~i~~~y~~~~~~g~~~~~~~ 127 (198)
++++|||+||+ +...+.||+.+.+++++++ |+|||+. +||++|.. +.+.+|+|+|+++|+ +||. ++
T Consensus 26 ~~~~igh~R~~t~~~~~~QP~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEvil~l~~---~~g~----~~ 96 (503)
T 1q15_A 26 KGEALSNGYLFIEQNGHYQKCEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAELLALLFT---RLGA----NA 96 (503)
T ss_dssp EEEEETTEEEEEETTCCEEEEECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHHHHHHHH---HHCG----GG
T ss_pred CceeEeeeeEEEcCCCCCCCcCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHHHHHHHH---HHHH----HH
Confidence 36899999999 3347899998876777777 9999999 99998853 678999999999999 7896 89
Q ss_pred hcccccceEEEEEECCCCEEEEEEcCCCCceEEEEEECCce-----------------EEEEechhhHHhh-------cC
Q 029123 128 LRDLDGSFGFVLYDCKAGTIFAALDADEGVRLFWGIAADGS-----------------VVISDNLELIKAS-------CA 183 (198)
Q Consensus 128 l~~L~G~Fafvi~D~~~~~l~~arD~~G~~PL~~g~~~~g~-----------------~~faSe~~~L~~~-------~~ 183 (198)
+++|+|+|||++||..++ ++++||++|++||||+.. ++. ++||||.++|... ..
T Consensus 97 l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~~-~~~~~t~~l~l~~~~~~~~~~~faSE~~al~~~~~~~~~T~~ 174 (503)
T 1q15_A 97 LALAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQG-KKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYTPV 174 (503)
T ss_dssp GGGCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEES-SSEEEESCHHHHHHHHCTTSSCBCCHHHHTTCSCCCTTCCSB
T ss_pred HHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEEe-CCceecccccccccccCCcceEEecchHHHHhccCCCCCccc
Confidence 999999999999998888 999999999999999987 466 8999999999765 13
Q ss_pred cceEEeCCCcEEEeC
Q 029123 184 KSFAPFPAGMSSAIN 198 (198)
Q Consensus 184 ~~~~~~ppG~~~~~~ 198 (198)
+.+..+|||+++.++
T Consensus 175 ~~v~~l~pG~~~~i~ 189 (503)
T 1q15_A 175 KNAQRLKPGAVHVLT 189 (503)
T ss_dssp TTEEECCSSEEEEEE
T ss_pred CCeEEECCCeEEEEe
Confidence 569999999998763
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.92 E-value=2.2e-25 Score=187.42 Aligned_cols=137 Identities=14% Similarity=0.161 Sum_probs=105.1
Q ss_pred CCcEEEEeecCCC--C--CCCCcceEecCCcEEEEEEEEEechHhHHHHhcC---------CCCCCHHHHHHHHHHHHHh
Q 029123 52 GNAAALAYVPPEN--P--NSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQYGL---------SKGSNEAMFVIEAYRTLRD 118 (198)
Q Consensus 52 ~~~~~lg~~r~~~--~--~~~~qP~~~~~~~~~~v~nG~i~N~~~L~~~l~~---------~~~~~D~e~i~~~y~~~~~ 118 (198)
.++++|||+||++ . ..++|||.. ++++++|||+|+|+.+||++|.. +.+.||+|+++++|. +
T Consensus 80 ~g~~~igHvR~AT~g~~s~~n~qPf~~--g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEvi~~l~~---~ 154 (274)
T 3mdn_A 80 RSGLFLSHVRASTGSCISRNNCHPFAA--RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVLFLLAL---S 154 (274)
T ss_dssp EEEEEEEEC------------CCCEEE--TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHHHHHHHH---H
T ss_pred CCCEEEEEEccccCCCCcccCCCCccc--CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHHHHHHHH---H
Confidence 3568899999992 2 368999986 68999999999999999988742 268999999999996 3
Q ss_pred cCC--c---hHHHhhcccccc-----------eEEEEEECCCCEEEEEEcC-CCCceEEEEEECC--ceEEEEechhhHH
Q 029123 119 RGP--Y---PAHQVLRDLDGS-----------FGFVLYDCKAGTIFAALDA-DEGVRLFWGIAAD--GSVVISDNLELIK 179 (198)
Q Consensus 119 ~g~--~---~~~~~l~~L~G~-----------Fafvi~D~~~~~l~~arD~-~G~~PL~~g~~~~--g~~~faSe~~~L~ 179 (198)
++. . .+.+++++|+|. |+|+++|. ++|+++||+ +|++||+|+...+ +.++||||. |.
T Consensus 155 ~~~~~~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d~--~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vASE~--l~ 230 (274)
T 3mdn_A 155 EGLEHDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDG--QTLYAARYSSDHIAPSVYYRYSHARQGWAVVSEP--LE 230 (274)
T ss_dssp TTTTTCHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEECS--SCEEEEEEESSSCCCCCEEEEETTTTEEEEESSC--C-
T ss_pred hhhcCCHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEcC--CEEEEEECCCCCCCCeEEEEEeCCCCEEEEEecc--cc
Confidence 442 1 125799999998 99999984 789999998 9999977777643 689999999 44
Q ss_pred hhcCcceEEeCCCcEEEeC
Q 029123 180 ASCAKSFAPFPAGMSSAIN 198 (198)
Q Consensus 180 ~~~~~~~~~~ppG~~~~~~ 198 (198)
..+ +.+.++|||++++++
T Consensus 231 ~~~-~~~~~v~pGeiv~i~ 248 (274)
T 3mdn_A 231 TDE-GDWTELRPGRMLTIG 248 (274)
T ss_dssp -CC-SCCEECCSSEEEEEE
T ss_pred cCC-ceEEEECcCEEEEEe
Confidence 344 459999999999874
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=99.81 E-value=4.8e-21 Score=159.57 Aligned_cols=141 Identities=12% Similarity=0.035 Sum_probs=106.7
Q ss_pred eCCcEEEEeecCCCC----CCCCcceEec--CCcEEEEEEEEEechHhHHHHhcCCCCCCHHHHHHHHHHHHHh-c-C--
Q 029123 51 FGNAAALAYVPPENP----NSVSQRWFCG--LHNVYCMFMGSLNNLSSLNKQYGLSKGSNEAMFVIEAYRTLRD-R-G-- 120 (198)
Q Consensus 51 ~~~~~~lg~~r~~~~----~~~~qP~~~~--~~~~~~v~nG~i~N~~~L~~~l~~~~~~~D~e~i~~~y~~~~~-~-g-- 120 (198)
+.++++|||+||++. ..++|||+.. .++++++|||.|.|+.+ |+++..+.+.+|+|++++++....+ . +
T Consensus 69 l~g~~~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi~~li~~~~~~~~~~~ 147 (257)
T 1te5_A 69 IKSETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-KPGFYRPVGETDSEAAFCDLLNRVRRAFPEP 147 (257)
T ss_dssp CEEEEEEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHHHHHHHHHHHHHCSSC
T ss_pred ccccEEEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCchh-hhccCCcccCCHHHHHHHHHHHHHHHhcCCC
Confidence 346789999999922 3689999864 45799999999999988 7665458999999999999874322 1 1
Q ss_pred C--chHHHhhcccc------cceEEEEEECCCCEEEEEEc----------CCCCceEEE-------EE---ECCceEEEE
Q 029123 121 P--YPAHQVLRDLD------GSFGFVLYDCKAGTIFAALD----------ADEGVRLFW-------GI---AADGSVVIS 172 (198)
Q Consensus 121 ~--~~~~~~l~~L~------G~Fafvi~D~~~~~l~~arD----------~~G~~PL~~-------g~---~~~g~~~fa 172 (198)
+ ..+.+++++|. |.|+|++.| .++|+++|| |+|.+||+. +. ..++.++||
T Consensus 148 ~~~~a~~~al~~l~~~~~~~G~~n~~l~~--g~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~i~~g~~~~~~~~~~vvA 225 (257)
T 1te5_A 148 VPVEVLLPVLISACDEYRKKGVFNALISD--GDWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIA 225 (257)
T ss_dssp CCHHHHHHHHHHHHHHHHTTBCCEEEEES--SSCEEEECSSCEEEEEEESSCCCEEEECSSEEEEECCCSSTTCEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHhcCcEEEEEEc--CCEEEEEEcCCceEEeecCCCcccccccccceeecccccCCCCCEEEEE
Confidence 1 12245555555 999999998 478999999 999999976 31 113468999
Q ss_pred echhhHHhhcCcceEEeCCCcEEEeC
Q 029123 173 DNLELIKASCAKSFAPFPAGMSSAIN 198 (198)
Q Consensus 173 Se~~~L~~~~~~~~~~~ppG~~~~~~ 198 (198)
||. |. . .+.++++|||++++++
T Consensus 226 SE~--l~-~-~~~wr~v~pGe~v~i~ 247 (257)
T 1te5_A 226 TEP--LT-D-NENWTLQQSGEWVLWW 247 (257)
T ss_dssp SSC--SS-S-SSSCEEECTTCEEEEE
T ss_pred eCc--cC-C-CCCeeEeCCCEEEEEE
Confidence 995 53 2 4579999999999874
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.76 E-value=2.9e-18 Score=168.08 Aligned_cols=139 Identities=12% Similarity=0.168 Sum_probs=111.1
Q ss_pred CCcEEEEeecCCCC----CCCCcceEecCCcEEEEEEEEEechHhHHHHhc--------------------C-CCCCCHH
Q 029123 52 GNAAALAYVPPENP----NSVSQRWFCGLHNVYCMFMGSLNNLSSLNKQYG--------------------L-SKGSNEA 106 (198)
Q Consensus 52 ~~~~~lg~~r~~~~----~~~~qP~~~~~~~~~~v~nG~i~N~~~L~~~l~--------------------~-~~~~~D~ 106 (198)
.++.+|||+||++. ..++||+. +++|||+|.|...+|+.+. . +.+.||+
T Consensus 201 ~g~~aigH~RySTnt~p~w~~AQPf~------~laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDS 274 (1479)
T 1ea0_A 201 ESDFAIYHQRYSTNTFPTWPLAQPFR------MLAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDS 274 (1479)
T ss_dssp CBSEEEEEECCCSCSCCCSTTSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHH
T ss_pred ceeEEEeeecccCCCCCCcccCCccE------EEEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcH
Confidence 35789999999932 36799974 3899999999999986531 1 6789999
Q ss_pred HHHHHHHHHHHhcCCch--H--------------------------HHhhcccccceEEEEEECCCCEEEEEEcCCCCce
Q 029123 107 MFVIEAYRTLRDRGPYP--A--------------------------HQVLRDLDGSFGFVLYDCKAGTIFAALDADEGVR 158 (198)
Q Consensus 107 e~i~~~y~~~~~~g~~~--~--------------------------~~~l~~L~G~Fafvi~D~~~~~l~~arD~~G~~P 158 (198)
|++.++++.+.+.|... + ..+++.++|.||+++.| .+.++++|||+|.||
T Consensus 275 evld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~d--g~~l~a~~DrnGlRP 352 (1479)
T 1ea0_A 275 GSLDTVFEVMVRAGRTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTD--GRWVVGGMDRNGLRP 352 (1479)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECS--SSEEEEECCTTCCSC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEe--CCEEEEEecCCCCcc
Confidence 99966666443334210 0 13578999999999988 479999999999999
Q ss_pred EEEEEECCceEEEEechhhHHhhcCcceE--EeCCCcEEEeC
Q 029123 159 LFWGIAADGSVVISDNLELIKASCAKSFA--PFPAGMSSAIN 198 (198)
Q Consensus 159 L~~g~~~~g~~~faSe~~~L~~~~~~~~~--~~ppG~~~~~~ 198 (198)
|.|+.++|+.+++|||..+|...+.+.++ ++.||++++||
T Consensus 353 l~~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id 394 (1479)
T 1ea0_A 353 MRYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVD 394 (1479)
T ss_dssp CEEEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEE
T ss_pred eEEEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEEE
Confidence 99999977789999999999766666667 99999999885
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.73 E-value=1.5e-17 Score=163.42 Aligned_cols=139 Identities=16% Similarity=0.135 Sum_probs=109.6
Q ss_pred CCcEEEEeecCCCC----CCCCcceEecCCcEEEEEEEEEechHhHH------HH-----------h---c--CCCCCCH
Q 029123 52 GNAAALAYVPPENP----NSVSQRWFCGLHNVYCMFMGSLNNLSSLN------KQ-----------Y---G--LSKGSNE 105 (198)
Q Consensus 52 ~~~~~lg~~r~~~~----~~~~qP~~~~~~~~~~v~nG~i~N~~~L~------~~-----------l---~--~~~~~~D 105 (198)
.++.+|||+||++. ..++||+. +++|||+|.|...+| +. + . .+.+.||
T Consensus 197 ~g~~aigH~RySTnt~p~w~~AQPf~------~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SD 270 (1520)
T 1ofd_A 197 TSNFAVYHRRFSTNTMPKWPLAQPMR------LLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSD 270 (1520)
T ss_dssp CBSEEEEEECCCSSSCCCGGGSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCH
T ss_pred ceeEEEEEccccCCCCCCcccCCchh------eeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCc
Confidence 35789999999933 26799974 389999998887777 32 1 2 1678999
Q ss_pred HHHHHHHHHHHHhcCCch--H----------------------------HHhhcccccceEEEEEECCCCEEEEEEcCCC
Q 029123 106 AMFVIEAYRTLRDRGPYP--A----------------------------HQVLRDLDGSFGFVLYDCKAGTIFAALDADE 155 (198)
Q Consensus 106 ~e~i~~~y~~~~~~g~~~--~----------------------------~~~l~~L~G~Fafvi~D~~~~~l~~arD~~G 155 (198)
+|++.++++-+.+.|... + ..+++.++|.|++++.| .+.++++|||+|
T Consensus 271 Se~ld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~d--g~~l~a~~DrnG 348 (1520)
T 1ofd_A 271 SYNLDSALELLVRTGRSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSD--GKIVGAGLDRNG 348 (1520)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHSCCCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEEC--SSEEEEEECTTC
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHhCcchhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEe--CCEEEEEecCCC
Confidence 999987766443334210 0 12468999999999998 479999999999
Q ss_pred CceEEEEEECCceEEEEechhhHHhhcCcceE--EeCCCcEEEeC
Q 029123 156 GVRLFWGIAADGSVVISDNLELIKASCAKSFA--PFPAGMSSAIN 198 (198)
Q Consensus 156 ~~PL~~g~~~~g~~~faSe~~~L~~~~~~~~~--~~ppG~~~~~~ 198 (198)
.|||.|+.++|+.+++|||..+|.-.+.+.++ ++.||++++||
T Consensus 349 lRPl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id 393 (1520)
T 1ofd_A 349 LRPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVD 393 (1520)
T ss_dssp CSCCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEEE
T ss_pred CCceEEEEeCCCEEEEEcccccccCcchheeeccCCCCCeEEEEE
Confidence 99999999977789999999999766767677 99999999885
No 12
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=45.24 E-value=4.2 Score=30.47 Aligned_cols=26 Identities=15% Similarity=0.310 Sum_probs=20.7
Q ss_pred ccceEEEEEECCCCEEEEEEcCCCCceEE
Q 029123 132 DGSFGFVLYDCKAGTIFAALDADEGVRLF 160 (198)
Q Consensus 132 ~G~Fafvi~D~~~~~l~~arD~~G~~PL~ 160 (198)
+|.|++|+.+ .+.++-..++ |++|||
T Consensus 27 e~~~ScVv~~--~~~i~ts~~r-Gv~pL~ 52 (151)
T 1vk9_A 27 KKDLSLLAYS--GRSIFESKDS-GLKPVV 52 (151)
T ss_dssp HTTCSEEEES--SSEEEEECCS-TTHHHH
T ss_pred hCCeeEEEec--CCEEEEeCCc-ChHHHH
Confidence 4789999954 4678888776 999998
No 13
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=28.69 E-value=72 Score=17.00 Aligned_cols=14 Identities=29% Similarity=0.458 Sum_probs=7.7
Q ss_pred ccceEEEEEECCCC
Q 029123 132 DGSFGFVLYDCKAG 145 (198)
Q Consensus 132 ~G~Fafvi~D~~~~ 145 (198)
+=.|-|+|+|..++
T Consensus 8 drPFlf~I~~~~t~ 21 (34)
T 2h4p_B 8 DHPFHFFIRHNKSK 21 (34)
T ss_dssp CSCEEEEEEETTTT
T ss_pred cCCEEEEEEECCCC
Confidence 34566666665444
No 14
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=26.25 E-value=85 Score=17.03 Aligned_cols=15 Identities=33% Similarity=0.871 Sum_probs=9.0
Q ss_pred cccceEEEEEECCCC
Q 029123 131 LDGSFGFVLYDCKAG 145 (198)
Q Consensus 131 L~G~Fafvi~D~~~~ 145 (198)
++=.|-|+|+|..++
T Consensus 8 ~drPFlf~I~~~~t~ 22 (36)
T 4afx_B 8 IDRPFHFMIYEETSG 22 (36)
T ss_dssp CCSCEEEEEEETTTT
T ss_pred eeCCEEEEEEECCCC
Confidence 345667777765544
No 15
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=24.22 E-value=1e+02 Score=17.17 Aligned_cols=15 Identities=20% Similarity=0.423 Sum_probs=9.7
Q ss_pred cccceEEEEEECCCC
Q 029123 131 LDGSFGFVLYDCKAG 145 (198)
Q Consensus 131 L~G~Fafvi~D~~~~ 145 (198)
.+=.|-|+|+|..++
T Consensus 12 ~drPFlf~I~~~~t~ 26 (40)
T 2riv_B 12 IDRSFMLLILERSTR 26 (40)
T ss_dssp CCBCEEEEEEETTTT
T ss_pred ecCCEEEEEEeCCCC
Confidence 455777777776554
No 16
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B* 2d26_B
Probab=22.55 E-value=93 Score=16.87 Aligned_cols=14 Identities=14% Similarity=0.472 Sum_probs=8.0
Q ss_pred cccceEEEEEECCC
Q 029123 131 LDGSFGFVLYDCKA 144 (198)
Q Consensus 131 L~G~Fafvi~D~~~ 144 (198)
++=.|-|+|+|..+
T Consensus 8 ~drPFlf~I~~~~t 21 (36)
T 3ndd_B 8 FNKPFVFLMIEQNT 21 (36)
T ss_dssp CCSCEEEEEEETTT
T ss_pred eeCCEEEEEEECCC
Confidence 34456666666544
No 17
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=22.52 E-value=1e+02 Score=16.57 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=8.1
Q ss_pred ccceEEEEEECCCC
Q 029123 132 DGSFGFVLYDCKAG 145 (198)
Q Consensus 132 ~G~Fafvi~D~~~~ 145 (198)
+=.|-|+|+|..++
T Consensus 8 drPFlf~I~~~~t~ 21 (35)
T 2xn6_B 8 DRSFMLLILERSTR 21 (35)
T ss_dssp CBCEEEEEEETTTT
T ss_pred cCCEEEEEEECCCC
Confidence 44566666665444
No 18
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=21.43 E-value=3e+02 Score=21.62 Aligned_cols=39 Identities=8% Similarity=0.320 Sum_probs=28.1
Q ss_pred hhcccccceEEEEEECCCCEEEEEEcCCCCceEEEEEECCce
Q 029123 127 VLRDLDGSFGFVLYDCKAGTIFAALDADEGVRLFWGIAADGS 168 (198)
Q Consensus 127 ~l~~L~G~Fafvi~D~~~~~l~~arD~~G~~PL~~g~~~~g~ 168 (198)
-+.-+.+..+-+-||+..++||++.|. .+-.|..+.++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g~ 59 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK---PAAIVEMTTNGD 59 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET---TEEEEEEETTCC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC---CCeEEEEeCCCC
Confidence 455666779999999888999999997 344455554444
Done!