Query 029131
Match_columns 198
No_of_seqs 216 out of 1983
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:50:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 5E-25 1.7E-29 162.0 17.4 127 20-174 4-130 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 6.3E-24 2.2E-28 159.3 17.4 140 22-177 5-146 (155)
3 3son_A Hypothetical nudix hydr 99.9 3.1E-22 1.1E-26 148.7 18.3 137 21-177 6-145 (149)
4 1ktg_A Diadenosine tetraphosph 99.9 6E-22 2.1E-26 144.9 18.4 129 20-174 3-136 (138)
5 2pbt_A AP4A hydrolase; nudix p 99.9 4.8E-22 1.7E-26 144.6 17.2 116 53-175 16-131 (134)
6 1vcd_A NDX1; nudix protein, di 99.9 6E-22 2.1E-26 142.7 16.4 110 53-173 15-124 (126)
7 3fcm_A Hydrolase, nudix family 99.9 9.3E-22 3.2E-26 153.2 15.8 148 17-184 42-195 (197)
8 3i9x_A MUTT/nudix family prote 99.9 1.6E-22 5.5E-27 156.2 11.4 144 16-183 23-182 (187)
9 3grn_A MUTT related protein; s 99.9 3.9E-21 1.3E-25 143.4 16.9 126 17-172 5-136 (153)
10 3gg6_A Nudix motif 18, nucleos 99.9 1.7E-21 6E-26 145.6 14.5 132 14-177 14-151 (156)
11 3f6a_A Hydrolase, nudix family 99.9 2.5E-21 8.4E-26 145.5 13.1 121 53-174 18-152 (159)
12 4dyw_A MUTT/nudix family prote 99.9 1.2E-20 4.1E-25 141.7 14.7 123 17-167 26-152 (157)
13 3gwy_A Putative CTP pyrophosph 99.9 1.8E-20 6E-25 137.8 15.3 109 53-172 18-132 (140)
14 2b0v_A Nudix hydrolase; struct 99.9 2.5E-20 8.6E-25 138.5 16.1 111 53-170 20-137 (153)
15 2azw_A MUTT/nudix family prote 99.9 5.2E-20 1.8E-24 135.9 17.0 127 19-170 17-144 (148)
16 3shd_A Phosphatase NUDJ; nudix 99.8 3.1E-20 1.1E-24 138.3 15.1 111 53-171 17-132 (153)
17 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 4.7E-20 1.6E-24 135.2 15.9 126 17-170 6-135 (139)
18 2o1c_A DATP pyrophosphohydrola 99.8 3.6E-20 1.2E-24 136.8 15.3 132 21-173 10-149 (150)
19 3id9_A MUTT/nudix family prote 99.8 1.5E-20 5.2E-25 142.6 13.6 122 17-167 20-147 (171)
20 3gz5_A MUTT/nudix family prote 99.8 1.4E-20 4.8E-25 151.1 13.8 135 19-177 21-160 (240)
21 3q1p_A Phosphohydrolase (MUTT/ 99.8 1.9E-20 6.3E-25 146.9 13.5 132 19-176 67-198 (205)
22 2fb1_A Conserved hypothetical 99.8 1.4E-20 4.6E-25 149.9 12.8 133 18-176 11-146 (226)
23 2fvv_A Diphosphoinositol polyp 99.8 1.8E-20 6.3E-25 145.9 13.2 131 17-176 37-172 (194)
24 3cng_A Nudix hydrolase; struct 99.8 1E-19 3.6E-24 140.7 17.1 124 19-175 39-166 (189)
25 3fjy_A Probable MUTT1 protein; 99.8 4E-20 1.4E-24 156.7 15.5 157 20-177 3-179 (364)
26 1k2e_A Nudix homolog; nudix/MU 99.8 4.4E-20 1.5E-24 138.4 12.8 115 53-175 13-138 (156)
27 3ees_A Probable pyrophosphohyd 99.8 1.6E-19 5.5E-24 133.9 15.5 111 53-174 34-148 (153)
28 1rya_A GDP-mannose mannosyl hy 99.8 1.2E-19 3.9E-24 135.9 14.6 130 18-167 16-151 (160)
29 3o8s_A Nudix hydrolase, ADP-ri 99.8 7.6E-20 2.6E-24 143.5 13.0 118 53-176 82-199 (206)
30 3exq_A Nudix family hydrolase; 99.8 7.1E-20 2.4E-24 138.0 11.9 111 52-171 23-136 (161)
31 2rrk_A ORF135, CTP pyrophospho 99.8 6E-19 2.1E-23 129.0 16.4 109 53-172 21-133 (140)
32 3q93_A 7,8-dihydro-8-oxoguanin 99.8 2.3E-19 7.7E-24 137.4 14.3 110 53-171 37-149 (176)
33 3eds_A MUTT/nudix family prote 99.8 5.9E-20 2E-24 137.2 10.8 98 53-156 34-136 (153)
34 3fk9_A Mutator MUTT protein; s 99.8 2.6E-19 8.7E-24 138.6 14.4 115 53-172 16-130 (188)
35 2w4e_A MUTT/nudix family prote 99.8 2.1E-19 7.3E-24 133.1 13.3 96 53-156 18-118 (145)
36 1sjy_A MUTT/nudix family prote 99.8 1.1E-18 3.9E-23 130.3 17.1 98 53-157 26-132 (159)
37 2fkb_A Putative nudix hydrolas 99.8 6.2E-19 2.1E-23 134.7 15.6 114 53-176 50-171 (180)
38 3h95_A Nucleoside diphosphate- 99.8 4.6E-19 1.6E-23 138.2 14.9 130 18-174 24-159 (199)
39 2kdv_A RNA pyrophosphohydrolas 99.8 9.3E-19 3.2E-23 132.5 16.0 135 18-173 6-155 (164)
40 3f13_A Putative nudix hydrolas 99.8 2.8E-19 9.5E-24 135.5 12.9 105 53-174 28-132 (163)
41 2pqv_A MUTT/nudix family prote 99.8 1.7E-19 5.7E-24 134.5 11.2 108 53-166 31-141 (154)
42 3hhj_A Mutator MUTT protein; n 99.8 6.4E-19 2.2E-23 132.0 14.1 110 53-173 42-157 (158)
43 1vhz_A ADP compounds hydrolase 99.8 1.5E-18 5.1E-23 135.4 16.2 100 53-160 61-165 (198)
44 3r03_A Nudix hydrolase; struct 99.8 5.5E-19 1.9E-23 129.9 13.0 111 53-174 21-137 (144)
45 1vk6_A NADH pyrophosphatase; 1 99.8 5.5E-19 1.9E-23 144.0 14.2 112 53-175 152-266 (269)
46 3oga_A Nucleoside triphosphata 99.8 2E-18 6.9E-23 130.1 15.8 111 53-167 40-161 (165)
47 2jvb_A Protein PSU1, mRNA-deca 99.8 4.4E-19 1.5E-23 131.0 10.6 115 52-176 17-139 (146)
48 2b06_A MUTT/nudix family prote 99.8 1.9E-18 6.6E-23 128.7 14.2 125 19-170 7-133 (155)
49 1f3y_A Diadenosine 5',5'''-P1, 99.8 1E-18 3.5E-23 131.0 12.4 139 14-174 8-162 (165)
50 2yvp_A NDX2, MUTT/nudix family 99.8 1E-18 3.5E-23 133.9 12.6 97 53-157 54-156 (182)
51 1hzt_A Isopentenyl diphosphate 99.8 1.6E-18 5.6E-23 133.8 12.3 118 53-175 45-175 (190)
52 2fml_A MUTT/nudix family prote 99.8 4.6E-18 1.6E-22 138.9 15.3 139 18-179 37-203 (273)
53 1v8y_A ADP-ribose pyrophosphat 99.8 4.6E-18 1.6E-22 129.0 14.0 96 53-157 46-146 (170)
54 1mut_A MUTT, nucleoside tripho 99.8 2.5E-19 8.5E-24 129.2 5.8 105 53-167 17-125 (129)
55 2qjo_A Bifunctional NMN adenyl 99.8 1.6E-18 5.6E-23 144.8 11.6 128 19-172 202-340 (341)
56 3o6z_A GDP-mannose pyrophospha 99.8 2.7E-18 9.1E-23 133.2 10.6 99 52-159 58-170 (191)
57 3q91_A Uridine diphosphate glu 99.8 3.2E-18 1.1E-22 135.5 11.2 91 63-161 95-194 (218)
58 1mk1_A ADPR pyrophosphatase; n 99.8 9.1E-18 3.1E-22 131.6 13.1 99 53-159 56-162 (207)
59 2qjt_B Nicotinamide-nucleotide 99.8 7.1E-18 2.4E-22 141.7 12.8 116 53-173 220-348 (352)
60 1nqz_A COA pyrophosphatase (MU 99.8 4.7E-18 1.6E-22 131.6 10.9 112 18-155 32-151 (194)
61 1x51_A A/G-specific adenine DN 99.8 2.6E-17 8.8E-22 122.9 14.0 109 52-171 34-148 (155)
62 1g0s_A Hypothetical 23.7 kDa p 99.7 9.3E-18 3.2E-22 131.9 11.4 98 53-158 71-182 (209)
63 1q27_A Putative nudix hydrolas 99.7 1.2E-17 4.2E-22 126.5 10.9 94 53-156 47-149 (171)
64 2a6t_A SPAC19A8.12; alpha/beta 99.7 8.9E-18 3E-22 137.1 8.5 98 52-158 114-215 (271)
65 2dsc_A ADP-sugar pyrophosphata 99.7 7.5E-17 2.6E-21 126.8 12.5 99 51-157 76-185 (212)
66 1q33_A Pyrophosphatase, ADP-ri 99.7 1.3E-16 4.4E-21 131.5 14.4 152 19-179 109-283 (292)
67 3e57_A Uncharacterized protein 99.7 7.3E-17 2.5E-21 126.8 12.3 95 53-155 80-188 (211)
68 3fsp_A A/G-specific adenine gl 99.7 8E-16 2.8E-20 130.6 13.7 107 53-174 253-363 (369)
69 1u20_A U8 snoRNA-binding prote 99.7 3.4E-16 1.2E-20 123.2 9.8 119 18-155 31-165 (212)
70 3qsj_A Nudix hydrolase; struct 99.6 6.4E-14 2.2E-18 111.6 14.3 129 17-167 5-206 (232)
71 2dho_A Isopentenyl-diphosphate 99.6 1.6E-13 5.5E-18 109.6 15.7 115 53-172 72-215 (235)
72 2pny_A Isopentenyl-diphosphate 99.5 1.9E-13 6.4E-18 109.9 14.9 117 53-174 83-228 (246)
73 3rh7_A Hypothetical oxidoreduc 99.5 9.6E-14 3.3E-18 115.6 12.1 109 19-171 182-292 (321)
74 2xsq_A U8 snoRNA-decapping enz 99.5 8.9E-14 3.1E-18 109.8 10.6 93 53-154 66-172 (217)
75 3dup_A MUTT/nudix family prote 99.5 3.4E-13 1.2E-17 111.1 14.3 120 18-158 116-245 (300)
76 3kvh_A Protein syndesmos; NUDT 99.3 3.7E-12 1.3E-16 97.5 4.9 96 17-131 18-115 (214)
77 3bho_A Cleavage and polyadenyl 99.2 3.9E-11 1.3E-15 92.8 9.9 69 18-104 56-130 (208)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.93 E-value=5e-25 Score=162.00 Aligned_cols=127 Identities=28% Similarity=0.392 Sum_probs=98.0
Q ss_pred eEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeecee
Q 029131 20 RLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEF 99 (198)
Q Consensus 20 r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~ 99 (198)
+.+||+|+++.+ +|||+++. .+.|.||||++++|||+.+||+||++||||+.+.....
T Consensus 4 ~~aag~vv~~~~---------------------~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~ 61 (134)
T 3i7u_A 4 EFSAGGVLFKDG---------------------EVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDY 61 (134)
T ss_dssp EEEEEEEEEETT---------------------EEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE
T ss_pred EEEEEEEEEECC---------------------EEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeee
Confidence 467888988764 79999875 46899999999999999999999999999999998888
Q ss_pred eEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHh
Q 029131 100 LGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~ 174 (198)
++.+.+.....+.. .....++|.+...... ..+.+|+.+++|++++++.+++.++..+.++.+ +++.+.
T Consensus 62 l~~~~~~~~~~~~~----~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~-a~~l~~ 130 (134)
T 3i7u_A 62 IGEIHYWYTLKGER----IFKTVKYYLMKYKEGE-PRPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEK-ALKLKE 130 (134)
T ss_dssp EEEEEEEEEETTEE----EEEEEEEEEEEEEEEC-CCCCTTSSEEEEEEHHHHHHHBCSHHHHHHHHH-HHHHHH
T ss_pred eeeeeEEecCCCce----EEEEEEEEEEEEcCCc-CcCChhheEEEEEEHHHHhhhcCChHHHHHHHH-HHHHHH
Confidence 88766554432111 1223455666544332 335578889999999999999999999999988 766443
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.92 E-value=6.3e-24 Score=159.27 Aligned_cols=140 Identities=21% Similarity=0.246 Sum_probs=103.0
Q ss_pred EeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCC-CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceee
Q 029131 22 VAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSG-PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFL 100 (198)
Q Consensus 22 ~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~-~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l 100 (198)
++|+|+|+... .....++..++||+++..+ +.|.||||++++|||+.+||.||++||||+.+.....+
T Consensus 5 a~G~iifr~~~-----------~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~ 73 (155)
T 3u53_A 5 ACGLIIFRRCL-----------IPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTII 73 (155)
T ss_dssp EEEEEEEEECC-----------CSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EeEEEEEcccc-----------ccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceee
Confidence 67999998652 1223366789999998764 56999999999999999999999999999998877766
Q ss_pred EEEEeccCCccCCCCCCceEEEEEEEEEecc-cccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHhhcc
Q 029131 101 GYYDFKSKTLQDEFSPEGLCKAAMFALLVKE-ELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYADHM 177 (198)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~~~~ 177 (198)
..+......... .......+|.+.+.. .....+.+|+.+++|++++++.+++.++..+.+|.+ +.+.|....
T Consensus 74 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~-a~~~L~~~~ 146 (155)
T 3u53_A 74 EGFKRELNYVAR----NKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQE-GHQFLCSIE 146 (155)
T ss_dssp EEEEEEEEEEET----TEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHH-HHHHHHHHH
T ss_pred eeEeeeeecCCC----cceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHH-HHHHHhCch
Confidence 654433222111 112234445554433 333445568889999999999999999999999998 888877653
No 3
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.90 E-value=3.1e-22 Score=148.66 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=100.7
Q ss_pred EEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeec--e
Q 029131 21 LVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLK--E 98 (198)
Q Consensus 21 ~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~--~ 98 (198)
.+++++++... ++..+|||++|...+.|.||||++++||++.+||.||++||||+.+... .
T Consensus 6 ~~v~vvi~~~~-----------------~~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~ 68 (149)
T 3son_A 6 FQVLVIPFIKT-----------------EANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYS 68 (149)
T ss_dssp CEEEEEEEEEC-----------------SSSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEE
T ss_pred eEEEEEEEEec-----------------CCCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEE
Confidence 46777887765 3456899999988888999999999999999999999999999998764 2
Q ss_pred eeEEEEeccCCccCCCCCCceEEEEEEEEEecc-cccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHhhcc
Q 029131 99 FLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKE-ELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYADHM 177 (198)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~~~~ 177 (198)
....+....... .+........++|.+.... .......+|+.+++|++++++.+++..+..+.++.. +.+++..+.
T Consensus 69 ~~~~~~~~~~~~--~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~l~~~~ 145 (149)
T 3son_A 69 LDSHASIPNFHF--SFNKPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLLEWDSNKTALYE-LNERLKNND 145 (149)
T ss_dssp EEEEEEEEGGGT--CSSSCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHCCCHHHHHHHHH-HHHHHHTTC
T ss_pred EEeeecccceee--ccCCceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHhcCHHHHHHHHH-HHHHHhhcc
Confidence 222222211110 0111124456777777652 122223478889999999999999999999999999 999987764
No 4
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.90 E-value=6e-22 Score=144.90 Aligned_cols=129 Identities=19% Similarity=0.203 Sum_probs=97.5
Q ss_pred eEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCC-CCEEecceecCCCCCHHHHHHHHHHHHhCceeeec-
Q 029131 20 RLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSG-PGLLFPKGGWENDETVEEAALREALEEAGVRGHLK- 97 (198)
Q Consensus 20 r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~-~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~- 97 (198)
+.++++++++.+ ++..+|||++++.+ +.|.||||++++||++.+||+||++||||+.+...
T Consensus 3 ~~~~~~vi~~~~-----------------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~ 65 (138)
T 1ktg_A 3 VKAAGLVIYRKL-----------------AGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLT 65 (138)
T ss_dssp EEEEEEEEEEEE-----------------TTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEE
T ss_pred eEEEEEEEEEec-----------------CCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceE
Confidence 567888888875 23568999998743 47999999999999999999999999999954433
Q ss_pred ---eeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHh
Q 029131 98 ---EFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 98 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~ 174 (198)
..++.+.+.... .....++|.+..........+.|+.+++|++++++.+++..+..+.++.. +.+++.
T Consensus 66 ~~~~~~~~~~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~l~ 136 (138)
T 1ktg_A 66 IHEDCHETLFYEAKG--------KPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRK-FSAFLA 136 (138)
T ss_dssp EEEEEEEEEEEEETT--------EEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHH-HHHHHH
T ss_pred EeccccceEEEEeCC--------CceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhhccchHHHHHHH-HHHHhh
Confidence 344444444332 23456677777654323334567889999999999999989999999998 888774
No 5
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.89 E-value=4.8e-22 Score=144.57 Aligned_cols=116 Identities=28% Similarity=0.392 Sum_probs=91.5
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEeccc
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEE 132 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 132 (198)
+|||++|.. +.|.||||++++||++.+||.||++||||+.+.....++.+.+.....+. ......++|.+.....
T Consensus 16 ~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 90 (134)
T 2pbt_A 16 EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGE----RIFKTVKYYLMKYKEG 90 (134)
T ss_dssp EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTE----EEEEEEEEEEEEEEEE
T ss_pred EEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCc----EEEEEEEEEEEEecCC
Confidence 899999877 88999999999999999999999999999999988888886655543211 1123456666665443
Q ss_pred ccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHhh
Q 029131 133 LESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYAD 175 (198)
Q Consensus 133 ~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~~ 175 (198)
... +.+|+.+++|++++++.+++..+..+.++.. +++++..
T Consensus 91 ~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~~~~ 131 (134)
T 2pbt_A 91 EPR-PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEK-ALKLKEK 131 (134)
T ss_dssp CCC-CCTTSSEEEEEEHHHHHHHCCSHHHHHHHHH-HHHHHHH
T ss_pred CcC-CCcceeEEEEEcHHHHHhhhcchhHHHHHHH-HHHHhhh
Confidence 322 3338889999999999999999999999998 8877654
No 6
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.89 E-value=6e-22 Score=142.73 Aligned_cols=110 Identities=28% Similarity=0.291 Sum_probs=88.9
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEeccc
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEE 132 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 132 (198)
+|||++|.. +.|.||||++++||++.+||.||++||||+.+.....++.+.+..... ....++|.+.....
T Consensus 15 ~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 85 (126)
T 1vcd_A 15 EVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKG--------VEREVHWFLMRGEG 85 (126)
T ss_dssp CEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTS--------CEEEEEEEEEEEES
T ss_pred EEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCc--------eEEEEEEEEEEcCC
Confidence 789999876 789999999999999999999999999999999888888877665321 23456666654332
Q ss_pred ccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHH
Q 029131 133 LESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLY 173 (198)
Q Consensus 133 ~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l 173 (198)
. ..++.|..+++|++++++.+++..+..+.++.. +.+++
T Consensus 86 ~-~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~-~~~~l 124 (126)
T 1vcd_A 86 A-PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEV-ALERL 124 (126)
T ss_dssp C-CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHH-HHHHS
T ss_pred C-CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHH-HHHhc
Confidence 2 334567889999999999999999999999988 77764
No 7
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.88 E-value=9.3e-22 Score=153.16 Aligned_cols=148 Identities=16% Similarity=0.206 Sum_probs=94.0
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCce-ee
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVR-GH 95 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~-~~ 95 (198)
.....++++++++.+ +.+|||++++..+.|.||||++++|||+.+||+||++||||+. +.
T Consensus 42 ~~~h~~~~~vv~~~~-------------------~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~ 102 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKE-------------------RNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPT 102 (197)
T ss_dssp SSEEEEEEEEEECTT-------------------SCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCE
T ss_pred CCccEEEEEEEEECC-------------------CCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCccc
Confidence 345677788887654 3489999998888899999999999999999999999999998 54
Q ss_pred ec----eeeEEEEeccCCccCCCCCCceEEEEEEEEEeccccc-CCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHH
Q 029131 96 LK----EFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELE-SWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFL 170 (198)
Q Consensus 96 ~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~ 170 (198)
.. ..+..+........+.+.+...+...+|.+.+..... ...++|+.+++|++++++.+++..+.++.++.+ ++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~-~~ 181 (197)
T 3fcm_A 103 PLLDKAFALDVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEK-LI 181 (197)
T ss_dssp ESCSSCSEEEEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHH-HH
T ss_pred ccCCCceEEEEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHH-HH
Confidence 32 1222222221111010000111223455555443332 223568889999999999999999999999999 99
Q ss_pred HHHhhccccccccc
Q 029131 171 KLYADHMISTSKEA 184 (198)
Q Consensus 171 ~~l~~~~~~~~~~~ 184 (198)
+++..+....++..
T Consensus 182 ~~l~~~~~~~~~~~ 195 (197)
T 3fcm_A 182 NKLKTQSKEGHHHH 195 (197)
T ss_dssp HHHHC---------
T ss_pred HHHHhccccccCcC
Confidence 99988865554443
No 8
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.88 E-value=1.6e-22 Score=156.21 Aligned_cols=144 Identities=19% Similarity=0.193 Sum_probs=105.1
Q ss_pred cCceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCC----ccEEEEEEec----------CCCCEEecceecCCCCCHHHH
Q 029131 16 EAGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEK----IVEVLMINST----------SGPGLLFPKGGWENDETVEEA 81 (198)
Q Consensus 16 ~~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~vLLv~r~----------~~~~W~lPgG~ve~gEs~~ea 81 (198)
......+++++++..+ ++ ..+|||++|. ..+.|.||||++++||++.+|
T Consensus 23 ~~p~~~~v~~vv~~~~-----------------~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~a 85 (187)
T 3i9x_A 23 RTPDGYTSDMILTTVK-----------------ELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQA 85 (187)
T ss_dssp CCCSEEEEEEEEEEEE-----------------EETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHH
T ss_pred CCcccceEEEEEEEEc-----------------CCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHH
Confidence 3444588899998876 23 4689999982 345799999999999999999
Q ss_pred HHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccc--cCCCCCcccceEEEehhHHHHhcCCh
Q 029131 82 ALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEEL--ESWPEQSTRQRSWLTVPEAIECCRHP 159 (198)
Q Consensus 82 a~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~e~~~~~~~~ 159 (198)
|+||++||||+.+.....++.+.+...... ......+|.+.+.... .....+|..+++|++++++.++...+
T Consensus 86 a~REl~EEtGl~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~ 159 (187)
T 3i9x_A 86 AERELEEETSLTDIPLIPFGVFDKPGRDPR------GWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAF 159 (187)
T ss_dssp HHHHHHHHHCCCSCCCEEEEEECCTTSSTT------SSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBST
T ss_pred HHHHHHHHHCCCCcceEEEEEEcCCccCCC------CCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCc
Confidence 999999999999988899988766544321 1233444544433221 12245678889999999999876677
Q ss_pred HHHHHHHHHHHHHHhhcccccccc
Q 029131 160 WMQEALEKGFLKLYADHMISTSKE 183 (198)
Q Consensus 160 ~~~~~l~~~~~~~l~~~~~~~~~~ 183 (198)
..+.++.. +++++..+....-++
T Consensus 160 ~~~~il~~-a~~~l~~~~~~~~~~ 182 (187)
T 3i9x_A 160 DHLDMLKK-AFSAITEEFLLTEGH 182 (187)
T ss_dssp THHHHHHH-HHHHHHHHHHTC---
T ss_pred cHHHHHHH-HHHHHHhhhhccccc
Confidence 78888988 888888776544333
No 9
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.88 E-value=3.9e-21 Score=143.37 Aligned_cols=126 Identities=16% Similarity=0.173 Sum_probs=97.2
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCC-----CCEEecceecCCCCCHHHHHHHHHHHHhC
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSG-----PGLLFPKGGWENDETVEEAALREALEEAG 91 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~-----~~W~lPgG~ve~gEs~~eaa~REl~EEtG 91 (198)
..++.++++++++.+ .+|||++|... +.|.||||++++||++.+||.||++||||
T Consensus 5 ~~~~~~v~~vi~~~~--------------------~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~G 64 (153)
T 3grn_A 5 KPYIISVYALIRNEK--------------------GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETG 64 (153)
T ss_dssp SCEEEEEEEEEECTT--------------------CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHC
T ss_pred CceEEEEEEEEEcCC--------------------CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhC
Confidence 446777888887544 26899998764 57999999999999999999999999999
Q ss_pred ceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhc-CChHHHHHHHHHHH
Q 029131 92 VRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECC-RHPWMQEALEKGFL 170 (198)
Q Consensus 92 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~-~~~~~~~~l~~~~~ 170 (198)
+.+.....++.+.+..... ....++|.+...... .....|..+++|++++++.++. ..+.++.++.. +.
T Consensus 65 l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~-l~ 134 (153)
T 3grn_A 65 ITMVPGDIAGQVNFELTEK--------KVIAIVFDGGYVVAD-VKLSYEHIEYSWVSLEKILGMETLPAYFRDFFER-FD 134 (153)
T ss_dssp CCCCCCSEEEEEEEECSSC--------EEEEEEEEEEECCCC-CCCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHH-HH
T ss_pred cEeecceEEEEEEEecCCc--------eEEEEEEEEEecCCc-EecCCCcceEEEEEHHHhhhcccchHHHHHHHHH-Hh
Confidence 9999888888877655442 335566666544322 2234677889999999999987 78888888887 65
Q ss_pred HH
Q 029131 171 KL 172 (198)
Q Consensus 171 ~~ 172 (198)
..
T Consensus 135 ~~ 136 (153)
T 3grn_A 135 RE 136 (153)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 10
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.7e-21 Score=145.63 Aligned_cols=132 Identities=19% Similarity=0.169 Sum_probs=100.8
Q ss_pred cccCceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHh
Q 029131 14 RYEAGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEA 90 (198)
Q Consensus 14 ~~~~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEt 90 (198)
++......++++++++.+ .+|||+++.+ .+.|.||||+++.||++.+||+||++|||
T Consensus 14 ~~~~~~~~~v~~~i~~~~--------------------~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEt 73 (156)
T 3gg6_A 14 RLRKNVCYVVLAVFLSEQ--------------------DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEA 73 (156)
T ss_dssp CCCTTCEEEEEEECBCTT--------------------SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHH
T ss_pred ccCCceEEEEEEEEEeCC--------------------CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhh
Confidence 455555666666666543 3899999887 46799999999999999999999999999
Q ss_pred CceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccc-cC--CCCCcccceEEEehhHHHHhcCChHHHHHHHH
Q 029131 91 GVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEEL-ES--WPEQSTRQRSWLTVPEAIECCRHPWMQEALEK 167 (198)
Q Consensus 91 Gl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~--~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~ 167 (198)
|+.+.....++.+.... ....++|.+...... .. .+++|..+++|++++++.+++..+.+.+++..
T Consensus 74 Gl~~~~~~~~~~~~~~~-----------~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~ 142 (156)
T 3gg6_A 74 GLHCEPETLLSVEERGP-----------SWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVEL 142 (156)
T ss_dssp CEEEEEEEEEEEEESST-----------TEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHH
T ss_pred CceeEeeeEEEEEcCCC-----------CEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchhHHHHHHH
Confidence 99999888888875321 124556666543322 11 23467889999999999999999999999998
Q ss_pred HHHHHHhhcc
Q 029131 168 GFLKLYADHM 177 (198)
Q Consensus 168 ~~~~~l~~~~ 177 (198)
+..++..+.
T Consensus 143 -~~~~~~~~~ 151 (156)
T 3gg6_A 143 -AAQYRQQAR 151 (156)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHhhcCC
Confidence 877776654
No 11
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.86 E-value=2.5e-21 Score=145.45 Aligned_cols=121 Identities=19% Similarity=0.140 Sum_probs=83.6
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEE-----------eccCC--ccCCCCCCce
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYD-----------FKSKT--LQDEFSPEGL 119 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~-----------~~~~~--~~~~~~~~~~ 119 (198)
+|||++++..+.|.||||++++|||+.+||+||++||||+.+.....++.+. +..+. ....+.+...
T Consensus 18 ~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 97 (159)
T 3f6a_A 18 KVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEKLLINPIHTILGDVSPNHS 97 (159)
T ss_dssp EEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCEEECCCSEEEEECSSSSSC
T ss_pred EEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccccccccccCccccccccCCCCce
Confidence 8999999888889999999999999999999999999999998877664321 00000 0000001122
Q ss_pred EEEEEEEEEecccccCCCCCcccceEEEehhHHHHhc-CChHHHHHHHHHHHHHHh
Q 029131 120 CKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECC-RHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 120 ~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~-~~~~~~~~l~~~~~~~l~ 174 (198)
...++|.+..........++|..+++|++++++.++. ..+....+... +.+...
T Consensus 98 ~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~-~~~~~~ 152 (159)
T 3f6a_A 98 HIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATE-ALDLLE 152 (159)
T ss_dssp EEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHH-HHHHCC
T ss_pred EEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHH-HHHHHh
Confidence 3456677765543333345788899999999999987 45555555555 555543
No 12
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.2e-20 Score=141.70 Aligned_cols=123 Identities=19% Similarity=0.143 Sum_probs=92.3
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHhCce
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEAGVR 93 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~ 93 (198)
...+.++++++++.+ +|||++|.+ .+.|.||||++++||++.+||+||++||||+.
T Consensus 26 ~~~~~~v~~vi~~~~---------------------~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~ 84 (157)
T 4dyw_A 26 EQPRVGCGAAIVRDG---------------------RILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIA 84 (157)
T ss_dssp CCCEEEEEEEEEETT---------------------EEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCE
T ss_pred CCceeEEEEEEEECC---------------------EEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcc
Confidence 346778888888733 799999884 46799999999999999999999999999999
Q ss_pred eeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecc-cccCCCCCcccceEEEehhHHHHhcCChHHHHHHHH
Q 029131 94 GHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKE-ELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEK 167 (198)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~ 167 (198)
+....+++.+.+...... .....++|.+.... .......+|..+++|++++++.+ ...+..+.++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~------~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~-~l~~~~~~~l~~ 152 (157)
T 4dyw_A 85 LERATLLCVVDHIDAANG------EHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQ-PLTHATRIALEQ 152 (157)
T ss_dssp EESCEEEEEEEEEETTTT------EEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCS-SBCHHHHHHHHH
T ss_pred cccCcEEEEEEeeccCCC------cEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccc-ccCHHHHHHHHH
Confidence 998888888776664321 23345566665432 22223346788899999999988 446666666665
No 13
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.86 E-value=1.8e-20 Score=137.83 Aligned_cols=109 Identities=17% Similarity=0.088 Sum_probs=85.1
Q ss_pred EEEEEEecCC------CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEE
Q 029131 53 EVLMINSTSG------PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFA 126 (198)
Q Consensus 53 ~vLLv~r~~~------~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~ 126 (198)
+|||++|... +.|.||||++++||++.+||.||++||||+.+.....++.+.+..... ....++|.
T Consensus 18 ~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~--------~~~~~~f~ 89 (140)
T 3gwy_A 18 KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDF--------EITMHAFL 89 (140)
T ss_dssp EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSC--------CEEEEEEE
T ss_pred EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCc--------eEEEEEEE
Confidence 7999998753 469999999999999999999999999999999989888877665532 34567777
Q ss_pred EEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHH
Q 029131 127 LLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKL 172 (198)
Q Consensus 127 ~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~ 172 (198)
+....... ...|..+++|++++++.++...+..+.+++. +.++
T Consensus 90 ~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~~~~~~il~~-~~~~ 132 (140)
T 3gwy_A 90 CHPVGQRY--VLKEHIAAQWLSTREMAILDWAEADKPIVRK-ISEQ 132 (140)
T ss_dssp EEECCSCC--CCCSSCEEEEECHHHHTTSCBCGGGHHHHHH-HHC-
T ss_pred EEecCCcc--cccccceeEeccHHHHhhCCCCcccHHHHHH-HHhC
Confidence 77554322 2357788999999999998878888888877 5544
No 14
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.86 E-value=2.5e-20 Score=138.49 Aligned_cols=111 Identities=20% Similarity=0.250 Sum_probs=83.5
Q ss_pred EEEEEEecCCC---CEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEe
Q 029131 53 EVLMINSTSGP---GLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLV 129 (198)
Q Consensus 53 ~vLLv~r~~~~---~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 129 (198)
+|||+++...+ .|.||||++++||++.+||+||++||||+.+.....++.+.+..+.. ......++|.+..
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~------~~~~~~~~f~~~~ 93 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASN------GTTYLRFTFSGQV 93 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTT------TEEEEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCC------CcEEEEEEEEEEe
Confidence 79999987654 69999999999999999999999999999999888888876655431 1233456676664
Q ss_pred ccccc-CCCCCcccceEEEehhHHHHh---cCChHHHHHHHHHHH
Q 029131 130 KEELE-SWPEQSTRQRSWLTVPEAIEC---CRHPWMQEALEKGFL 170 (198)
Q Consensus 130 ~~~~~-~~~~~e~~~~~W~~~~e~~~~---~~~~~~~~~l~~~~~ 170 (198)
..... ...+.|..+++|++++++.++ ...+.++.++.. ++
T Consensus 94 ~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~-~~ 137 (153)
T 2b0v_A 94 VSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIED-YH 137 (153)
T ss_dssp EEECTTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHH-HH
T ss_pred CCCCCCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHH-HH
Confidence 43322 234567788999999999995 356666666666 44
No 15
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.85 E-value=5.2e-20 Score=135.94 Aligned_cols=127 Identities=24% Similarity=0.270 Sum_probs=91.9
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeece
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKE 98 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~ 98 (198)
.+..+++++++.. ..+|||++|. .+.|.||||++++||++.+||.||++||||+.+....
T Consensus 17 ~~~~~~~vi~~~~-------------------~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~ 76 (148)
T 2azw_A 17 TRYAAYIIVSKPE-------------------NNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGC 76 (148)
T ss_dssp ECCEEEEECEEGG-------------------GTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEE
T ss_pred eeeEEEEEEECCC-------------------CCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeee
Confidence 4566777777653 2389999874 5789999999999999999999999999999998888
Q ss_pred eeEEEEec-cCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHH
Q 029131 99 FLGYYDFK-SKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFL 170 (198)
Q Consensus 99 ~l~~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~ 170 (198)
.++.+... ....... ......++|.+....... .+.+|..+++|++++++.+++..+..+.++.. ++
T Consensus 77 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~ 144 (148)
T 2azw_A 77 YLGEADEYFYSNHRQT---AYYNPGYFYVANTWRQLS-EPLERTNTLHWVAPEEAVRLLKRGSHRWAVEK-WL 144 (148)
T ss_dssp EEEEEEEEEEETTTTE---EEEEEEEEEEEEEEEECS-SCC-CCSEEEEECHHHHHHHBSCHHHHHHHHH-HH
T ss_pred EEEEEEEEEcCCCCCc---ceEEEEEEEEEEcCcCCc-CCCCceeeEEEeeHHHHHhhhcchhHHHHHHH-HH
Confidence 88775421 1111100 012345666666443322 23456778999999999999989999998888 65
No 16
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.85 E-value=3.1e-20 Score=138.26 Aligned_cols=111 Identities=22% Similarity=0.318 Sum_probs=84.0
Q ss_pred EEEEEEecC--CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEec
Q 029131 53 EVLMINSTS--GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVK 130 (198)
Q Consensus 53 ~vLLv~r~~--~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 130 (198)
+|||++|.. .+.|.||||++++|||+.+||.||++||||+.+.....++.+.+..+.. .....++|.+...
T Consensus 17 ~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~-------~~~~~~~f~~~~~ 89 (153)
T 3shd_A 17 KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDK-------TPFLRFLFAIELE 89 (153)
T ss_dssp EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTS-------CCEEEEEEEEECS
T ss_pred EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCC-------ceEEEEEEEEEcc
Confidence 799998853 3459999999999999999999999999999999888888877666542 2345677777755
Q ss_pred ccc-cCCCCCcccceEEEehhHHHHh--cCChHHHHHHHHHHHH
Q 029131 131 EEL-ESWPEQSTRQRSWLTVPEAIEC--CRHPWMQEALEKGFLK 171 (198)
Q Consensus 131 ~~~-~~~~~~e~~~~~W~~~~e~~~~--~~~~~~~~~l~~~~~~ 171 (198)
... ....+.|+.+++|++++++... ...+.+..++.. +++
T Consensus 90 ~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~-~~~ 132 (153)
T 3shd_A 90 QICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRC-YQS 132 (153)
T ss_dssp SCCCCCCCSTTCCEEEEECHHHHHTCSCBSSTHHHHHHHH-HHH
T ss_pred ccCcCCCCcccceeeEEecHHHhhccccccCchHHHHHHH-HHh
Confidence 433 2234567888999999999332 356767776666 543
No 17
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.85 E-value=4.7e-20 Score=135.23 Aligned_cols=126 Identities=21% Similarity=0.206 Sum_probs=91.3
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccE--EEEEEecCC-CCEEecceecCCCCCHHHHHHHHHHHHhCce
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVE--VLMINSTSG-PGLLFPKGGWENDETVEEAALREALEEAGVR 93 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--vLLv~r~~~-~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~ 93 (198)
..++.++++++++.+. ..+ +||++|... +.|.||||++++||++.+||+||++||||+.
T Consensus 6 ~~p~~~v~~vi~~~~~------------------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 67 (139)
T 2yyh_A 6 KTPLLATDVIIRLWDG------------------ENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLE 67 (139)
T ss_dssp CCCEEEEEEEEEEEET------------------TEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEEEEEEEEcC------------------CCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCC
Confidence 3467788889988541 235 999998764 4599999999999999999999999999999
Q ss_pred eeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHH-HhcCChHHHHHHHHHHH
Q 029131 94 GHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAI-ECCRHPWMQEALEKGFL 170 (198)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~-~~~~~~~~~~~l~~~~~ 170 (198)
+.....++.+.+..... ..+...++|.+...+. ..+.+|..+++|++++++. +.+..+ .++++.. ++
T Consensus 68 ~~~~~~~~~~~~~~~~~------~~~~~~~~f~~~~~~~--~~~~~e~~~~~W~~~~el~~~~l~~~-~~~~l~~-~l 135 (139)
T 2yyh_A 68 VRLHKLMGVYSDPERDP------RAHVVSVVWIGDAQGE--PKAGSDAKKVKVYRLEEIPLDKLVFD-HKKIILD-FL 135 (139)
T ss_dssp CEEEEEEEEECCTTSCT------TSCEEEEEEEEEEESC--CCCCTTEEEEEEECTTSCCGGGBCTT-HHHHHHH-HH
T ss_pred cccceEEEEECCCCcCC------CceEEEEEEEEecCCc--cCCCCCcceEEEEEHHHCCHhhcCCC-HHHHHHH-HH
Confidence 98888888776544321 1234566777766332 2345678889999999999 333333 4556665 44
No 18
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.85 E-value=3.6e-20 Score=136.78 Aligned_cols=132 Identities=19% Similarity=0.202 Sum_probs=92.1
Q ss_pred EEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC-CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeec--
Q 029131 21 LVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS-GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLK-- 97 (198)
Q Consensus 21 ~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~-- 97 (198)
.++++++++.+ ..++||+++.. .+.|.||||++++||++.+||.||++||||+.+...
T Consensus 10 ~~v~~~i~~~~-------------------~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~ 70 (150)
T 2o1c_A 10 VSILVVIYAQD-------------------TKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQL 70 (150)
T ss_dssp EEEEEEEEETT-------------------TCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTC
T ss_pred eEEEEEEEeCC-------------------CCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccce
Confidence 56777777653 23789999876 567999999999999999999999999999988763
Q ss_pred eeeEEEEecc----CCccCCCCC-CceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHH
Q 029131 98 EFLGYYDFKS----KTLQDEFSP-EGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKL 172 (198)
Q Consensus 98 ~~l~~~~~~~----~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~ 172 (198)
..++.+.... ......+.+ ......++|.+........ ...|..+++|++++++.++...+..+.++.. +.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~ 148 (150)
T 2o1c_A 71 TLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQ-FVIN 148 (150)
T ss_dssp CEEEEEEEEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHH-HTTC
T ss_pred eEEeeeceeeeeeecccccccCCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHhhhcCHHHHHHHHH-HHHh
Confidence 3444322110 000001110 1234567777776543322 2367889999999999999888988999888 7665
Q ss_pred H
Q 029131 173 Y 173 (198)
Q Consensus 173 l 173 (198)
+
T Consensus 149 l 149 (150)
T 2o1c_A 149 A 149 (150)
T ss_dssp -
T ss_pred c
Confidence 4
No 19
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.85 E-value=1.5e-20 Score=142.63 Aligned_cols=122 Identities=20% Similarity=0.168 Sum_probs=89.8
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC-CCCEEecceecCCCCCHHHHHHHHHHHHhCceee
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS-GPGLLFPKGGWENDETVEEAALREALEEAGVRGH 95 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~ 95 (198)
..++..+++++++.+ +|||++|.. .+.|.||||++++||++.+||+||++||||+.+.
T Consensus 20 ~~~~~~v~~ii~~~~---------------------~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 78 (171)
T 3id9_A 20 NIMQVRVTGILIEDE---------------------KVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVK 78 (171)
T ss_dssp --CEEEEEEEEEETT---------------------EEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEE
T ss_pred CceEEEEEEEEEECC---------------------EEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccc
Confidence 345667777777543 799999876 5779999999999999999999999999999998
Q ss_pred eceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccC-----CCCCcccceEEEehhHHHHhcCChHHHHHHHH
Q 029131 96 LKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELES-----WPEQSTRQRSWLTVPEAIECCRHPWMQEALEK 167 (198)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-----~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~ 167 (198)
....++.+.+..... ....++|.+........ ....|..+++|++++++.++...+..+.++..
T Consensus 79 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~ 147 (171)
T 3id9_A 79 IKKLLYVCDKPDASP--------SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISG 147 (171)
T ss_dssp EEEEEEEEEETTSSS--------CEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHH
T ss_pred cceEEEEEcccCCCC--------cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHH
Confidence 888888887665442 22344455543322211 13367788999999999998878877777777
No 20
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.85 E-value=1.4e-20 Score=151.14 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=100.7
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCC--CCCHHHHHHHHHHHHhCce
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWEN--DETVEEAALREALEEAGVR 93 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~--gEs~~eaa~REl~EEtGl~ 93 (198)
+..+|++|++... ++..+|||++|.. .+.|.||||++++ |||+.+||.||++||||+.
T Consensus 21 p~v~v~~vi~~~~-----------------~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~ 83 (240)
T 3gz5_A 21 QLLTVDAVLFTYH-----------------DQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVV 83 (240)
T ss_dssp CEEEEEEEEEEEE-----------------TTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSC
T ss_pred CccEEEEEEEEEe-----------------CCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCC
Confidence 4578888888766 3467999999876 3569999999999 9999999999999999999
Q ss_pred eeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHH
Q 029131 94 GHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLY 173 (198)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l 173 (198)
+...++++++........ .+...++|.+.+.........++..+++|++++++...........++.. .++++
T Consensus 84 ~~~~~~l~~~~~~~r~~~------~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~-a~~rl 156 (240)
T 3gz5_A 84 PPYIEQLCTVGNNSRDAR------GWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQ-ARERL 156 (240)
T ss_dssp CSEEEEEEEEEESSSSTT------SCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHH-HHHHH
T ss_pred CCceeeEEEeCCCccCCC------ceEEEEEEEEEecccccCCCCCcccceEEecHHHcccCCcchhHHHHHHH-HHHHH
Confidence 988899998877655432 23455666666544322223457789999999999865444555667766 66666
Q ss_pred hhcc
Q 029131 174 ADHM 177 (198)
Q Consensus 174 ~~~~ 177 (198)
..+.
T Consensus 157 r~kl 160 (240)
T 3gz5_A 157 TQKA 160 (240)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6554
No 21
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.84 E-value=1.9e-20 Score=146.89 Aligned_cols=132 Identities=13% Similarity=0.127 Sum_probs=98.0
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeece
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKE 98 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~ 98 (198)
++.++++++++.+ +|||+++...+.|.||||++++||++.+||.||++||||+.+....
T Consensus 67 ~~~~v~~vv~~~~---------------------~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~ 125 (205)
T 3q1p_A 67 PKVDIRAVVFQNE---------------------KLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFK 125 (205)
T ss_dssp CEEEEEEEEEETT---------------------EEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEE
T ss_pred CcceEEEEEEECC---------------------EEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccce
Confidence 4677777887532 8999998877889999999999999999999999999999999888
Q ss_pred eeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHhhc
Q 029131 99 FLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYADH 176 (198)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~~~ 176 (198)
.++.+.......... ......++|.+...... ..+..|..+++|++++++.++...+...+.+.. +++.+.+.
T Consensus 126 ~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~-~~~~~~~~ 198 (205)
T 3q1p_A 126 LLAIFDKEKHQPSPS---ATHVYKIFIGCEIIGGE-KKTSIETEEVEFFGENELPNLSIARNTEDQIKE-MFAYMKDP 198 (205)
T ss_dssp EEEEEEHHHHSCCCC---SSCEEEEEEEEEEEEEC-CCCCTTSCCEEEECTTSCCCBCTTTCCHHHHHH-HHHHHHCT
T ss_pred EEEEEeccccCCCCC---CceEEEEEEEEEecCCc-cCCCCcceEEEEEeHHHhhhcCCCccHHHHHHH-HHHHHhCC
Confidence 888877543321100 11234555666544332 234478889999999999998888888888888 77776554
No 22
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.84 E-value=1.4e-20 Score=149.94 Aligned_cols=133 Identities=17% Similarity=0.188 Sum_probs=95.9
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHhCcee
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEAGVRG 94 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~ 94 (198)
.++.++++|++..+ ++..+|||++|.. .+.|.||||++++|||+.+||.||++||||+.+
T Consensus 11 ~p~v~v~~vi~~~~-----------------~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~ 73 (226)
T 2fb1_A 11 TFYLGIDCIIFGFN-----------------EGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLEN 73 (226)
T ss_dssp CEEEEEEEEEEEEE-----------------TTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCS
T ss_pred CCeEEEEEEEEEEe-----------------CCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCC
Confidence 46788899998765 3467899999876 356999999999999999999999999999999
Q ss_pred eeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHh
Q 029131 95 HLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~ 174 (198)
...++++.+....... ..+...++|.+.+.........+|..+++|++++++.++..+ ...++.. .+.++.
T Consensus 74 ~~~~~l~~~~~~~r~~------~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~~d--h~~il~~-a~~rlr 144 (226)
T 2fb1_A 74 VYMEQVGAFGAIDRDP------GERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFD--HPEMVDK-AREMMK 144 (226)
T ss_dssp CEEEEEEEECCTTSSS------SSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBSTT--HHHHHHH-HHHHHH
T ss_pred CceEEEEEeCCCCcCC------CceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhccCC--HHHHHHH-HHHHHH
Confidence 8888888876554332 123345566666543322223356788999999999876533 3355555 555554
Q ss_pred hc
Q 029131 175 DH 176 (198)
Q Consensus 175 ~~ 176 (198)
.+
T Consensus 145 ~~ 146 (226)
T 2fb1_A 145 QK 146 (226)
T ss_dssp HH
T ss_pred hh
Confidence 44
No 23
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.84 E-value=1.8e-20 Score=145.86 Aligned_cols=131 Identities=30% Similarity=0.578 Sum_probs=88.0
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC-CCCEEecceecCCCCCHHHHHHHHHHHHhCceee
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS-GPGLLFPKGGWENDETVEEAALREALEEAGVRGH 95 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~ 95 (198)
..++..+++|+++.+ ...+|||+++.. .+.|.||||++++||++++||+||++||||+++.
T Consensus 37 ~~~~~~~~~vi~~~~------------------~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~ 98 (194)
T 2fvv_A 37 DGYKKRAACLCFRSE------------------SEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGT 98 (194)
T ss_dssp TSCEEEEEEEEESST------------------TCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEE
T ss_pred CCccccEEEEEEEEC------------------CCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccc
Confidence 457777888888543 234899999865 4679999999999999999999999999999999
Q ss_pred eceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCC--CcccceEEEehhHHHHhcC--ChHHHHHHHHHHHH
Q 029131 96 LKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPE--QSTRQRSWLTVPEAIECCR--HPWMQEALEKGFLK 171 (198)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~--~e~~~~~W~~~~e~~~~~~--~~~~~~~l~~~~~~ 171 (198)
...+++.+.+.... ...++|.+.+.......+. .+..+++|++++++.+++. .+.+...+.. +..
T Consensus 99 ~~~~l~~~~~~~~~----------~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~~~~~~~~~l~~-l~~ 167 (194)
T 2fvv_A 99 LGRLVGIFENQERK----------HRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFET-LRQ 167 (194)
T ss_dssp EEEEEEEEEETTTT----------EEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTTTCHHHHHHTCC----
T ss_pred cceEEEEEEcCCCc----------eEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhcCcHHHHHHHHH-Hhh
Confidence 88888887743221 1345565554332211111 1345789999999998763 3445555555 555
Q ss_pred HHhhc
Q 029131 172 LYADH 176 (198)
Q Consensus 172 ~l~~~ 176 (198)
+...+
T Consensus 168 ~~~~~ 172 (194)
T 2fvv_A 168 GYSAN 172 (194)
T ss_dssp -----
T ss_pred ccccc
Confidence 44433
No 24
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.84 E-value=1e-19 Score=140.71 Aligned_cols=124 Identities=21% Similarity=0.287 Sum_probs=95.3
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHhCceee
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEAGVRGH 95 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~ 95 (198)
++.++++|+++.+ +|||+++.. .+.|.||||++++||++++||+||++||||+.+.
T Consensus 39 ~~~~v~~ii~~~~---------------------~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 97 (189)
T 3cng_A 39 PKVIVGCIPEWEN---------------------KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVE 97 (189)
T ss_dssp CEEEEEEEEEETT---------------------EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEE
T ss_pred CceEEEEEEEeCC---------------------EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccc
Confidence 4567777877632 799999876 4579999999999999999999999999999998
Q ss_pred eceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHH-HhcCChHHHHHHHHHHHHHHh
Q 029131 96 LKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAI-ECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~-~~~~~~~~~~~l~~~~~~~l~ 174 (198)
....+..+.+... ....++|.+...... ..+..|..+++|++++++. ..+..+..+.++.. +++...
T Consensus 98 ~~~~~~~~~~~~~----------~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~-~l~~~~ 165 (189)
T 3cng_A 98 IRELYAVYSLPHI----------SQVYMLFRAKLLDLD-FFPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKR-YMEERH 165 (189)
T ss_dssp EEEEEEEEEEGGG----------TEEEEEEEEEECCSC-CCCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHH-HHHHHH
T ss_pred cceeEEEEecCCC----------cEEEEEEEEEeCCCc-cCCCccceeEEEECHHHcCcccccChHHHHHHHH-HHHhcc
Confidence 7777777665432 235667777654332 2345678899999999998 45678888888888 776554
Q ss_pred h
Q 029131 175 D 175 (198)
Q Consensus 175 ~ 175 (198)
.
T Consensus 166 ~ 166 (189)
T 3cng_A 166 H 166 (189)
T ss_dssp H
T ss_pred C
Confidence 3
No 25
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.84 E-value=4e-20 Score=156.71 Aligned_cols=157 Identities=18% Similarity=0.190 Sum_probs=104.4
Q ss_pred eEEeeEEEEeecCCCCCCCCCC---CCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeee
Q 029131 20 RLVAGCIPFKYRNRNCEEGDGD---GDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHL 96 (198)
Q Consensus 20 r~~~g~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~ 96 (198)
..++|+|+|+....-....++. ..+....++..+|||+++...+.|.||||++|+||++.+||+||++||||+.+..
T Consensus 3 ~~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~ 82 (364)
T 3fjy_A 3 LEAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKL 82 (364)
T ss_dssp CCEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEE
T ss_pred ccccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeee
Confidence 3578999999651000000000 0001122456799999998888899999999999999999999999999999988
Q ss_pred ceeeEEEEeccCCccCCCC-----CCceEEEEEEEEEecccc----------c--CCCCCcccceEEEehhHHHHhcCCh
Q 029131 97 KEFLGYYDFKSKTLQDEFS-----PEGLCKAAMFALLVKEEL----------E--SWPEQSTRQRSWLTVPEAIECCRHP 159 (198)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~f~~~~~~~~----------~--~~~~~e~~~~~W~~~~e~~~~~~~~ 159 (198)
...++.+.+.....+.... .......++|.+...... . ...++|+.+++|++++++.+++.++
T Consensus 83 ~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 162 (364)
T 3fjy_A 83 GPYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHS 162 (364)
T ss_dssp EEEEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCH
T ss_pred ccccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcch
Confidence 8888876665543210000 001234566666654321 1 1234688899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 029131 160 WMQEALEKGFLKLYADHM 177 (198)
Q Consensus 160 ~~~~~l~~~~~~~l~~~~ 177 (198)
..+.++.. +.+++...+
T Consensus 163 ~~r~il~~-~~~~l~~g~ 179 (364)
T 3fjy_A 163 TDKDTLAV-FVDRVQEGA 179 (364)
T ss_dssp HHHHHHHH-HHHHHHTTG
T ss_pred hhHHHHHH-HHHHhccCC
Confidence 99999999 999986543
No 26
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.83 E-value=4.4e-20 Score=138.36 Aligned_cols=115 Identities=18% Similarity=0.160 Sum_probs=80.0
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCc-c---------CCCCCCceE-E
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTL-Q---------DEFSPEGLC-K 121 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~-~---------~~~~~~~~~-~ 121 (198)
+|||+++...+.|.||||++++||++.+||.||++||||+++.....++.+.+..... . ..+...... .
T Consensus 13 ~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (156)
T 1k2e_A 13 KVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPLVILEEVVKYPEETHIHF 92 (156)
T ss_dssp EEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSEEECCCCSEEEEEEEECSSCEEEEE
T ss_pred EEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeecccccccccccceeeeeeecCCCCceEEE
Confidence 7999998877889999999999999999999999999999998776543221100000 0 000000111 2
Q ss_pred EEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHhh
Q 029131 122 AAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYAD 175 (198)
Q Consensus 122 ~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~~ 175 (198)
..+|.+... ..|..+++|++++++.++...+..+.++.. +++++..
T Consensus 93 ~~~f~~~~~-------~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~l~~ 138 (156)
T 1k2e_A 93 DLIYLVKRV-------GGDLKNGEWIDVREIDRIETFPNVRKVVSL-ALSTLYR 138 (156)
T ss_dssp EEEEEEEEE-------EECCCSCEEEEGGGGGGSCBSTTHHHHHHH-HHHHHHH
T ss_pred EEEEEEEec-------CCcEeeeEEeCHHHHhcCCCChHHHHHHHH-HHHHHHh
Confidence 334544422 234678999999999988778888889888 8776654
No 27
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.83 E-value=1.6e-19 Score=133.86 Aligned_cols=111 Identities=21% Similarity=0.168 Sum_probs=88.0
Q ss_pred EEEEEEecCC----CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTSG----PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~~----~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
+|||++|... +.|.||||++++||++.+||.||++||||+.+.....++.+.+..... ....++|.+.
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 105 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDV--------GILILFYEIL 105 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTE--------EEEEEEEEEC
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCC--------eEEEEEEEEE
Confidence 7999998764 579999999999999999999999999999999888888876665542 2345566665
Q ss_pred ecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHh
Q 029131 129 VKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 129 ~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~ 174 (198)
..... ....|..+++|++++++.++...+..+.++.. +.+++.
T Consensus 106 ~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~~~ 148 (153)
T 3ees_A 106 YWKGE--PRAKHHMMLEWIHPEELKHRNIPEANRKILHK-IYKALG 148 (153)
T ss_dssp EEESC--CCCSSSSEEEEECGGGGGGSCCCHHHHTTHHH-HHHHTT
T ss_pred ECCCC--cCCCccceEEEecHHHhhhCCCCcchHHHHHH-HHHhhc
Confidence 43322 23457788999999999998888888888888 776653
No 28
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.83 E-value=1.2e-19 Score=135.86 Aligned_cols=130 Identities=21% Similarity=0.159 Sum_probs=91.0
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHhCcee
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEAGVRG 94 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~ 94 (198)
..+.++++++++.+ .+|||++|.. .+.|.||||++++||++.+||.||++||||+.+
T Consensus 16 ~~~~~v~~vi~~~~--------------------~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~ 75 (160)
T 1rya_A 16 TPLVSLDFIVENSR--------------------GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRL 75 (160)
T ss_dssp SCEEEEEEEEECTT--------------------SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCC
T ss_pred CcEEEEEEEEEcCC--------------------CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCC
Confidence 45677888887543 2689999876 467999999999999999999999999999996
Q ss_pred e--eceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhc-CChHHHHHHHH
Q 029131 95 H--LKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECC-RHPWMQEALEK 167 (198)
Q Consensus 95 ~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~-~~~~~~~~l~~ 167 (198)
. ...+++.+.+.............+...++|.+............|..+++|++++++.++. ..+..++++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~ 151 (160)
T 1rya_A 76 PITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLA 151 (160)
T ss_dssp CGGGSEEEEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGGCH
T ss_pred CcccceEEEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHHHH
Confidence 4 5577777765443221000011234566777765543323345678889999999999863 45666666655
No 29
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.83 E-value=7.6e-20 Score=143.49 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=90.3
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEeccc
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEE 132 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 132 (198)
+|||+++. .+.|.||||++++||++.+||.||++||||+.+.....++.+.+........ ......++|.+.....
T Consensus 82 ~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 157 (206)
T 3o8s_A 82 KILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNPAKS---AHRVTKVFILCRLLGG 157 (206)
T ss_dssp EEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC--------CEEEEEEEEEEEEE
T ss_pred EEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEeccccCCCCC---CceEEEEEEEEEecCC
Confidence 89999987 7789999999999999999999999999999999889998876433222100 1123455566654433
Q ss_pred ccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHhhc
Q 029131 133 LESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYADH 176 (198)
Q Consensus 133 ~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~~~ 176 (198)
. ..+..|..+++|++++++.++...+...+.+.. +++.+.+.
T Consensus 158 ~-~~~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~-~~~~~~~~ 199 (206)
T 3o8s_A 158 E-FQPNSETVASGFFSLDDLPPLYLGKNTAEQLAL-CLEASRSE 199 (206)
T ss_dssp C-CCCCSSCSEEEEECTTSCCCBCTTTCCHHHHHH-HHHHHHCS
T ss_pred e-ecCCCCceEEEEEeHHHhhhccCCCchHHHHHH-HHHHHHCC
Confidence 2 223478889999999999999888888999988 88876653
No 30
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.82 E-value=7.1e-20 Score=137.98 Aligned_cols=111 Identities=23% Similarity=0.254 Sum_probs=85.2
Q ss_pred cEEEEEEecCC---CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 52 VEVLMINSTSG---PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 52 ~~vLLv~r~~~---~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
.+|||++|... +.|.||||++++||++.+||.||++||||+.+...+.++.+.+..+... .....++|.+.
T Consensus 23 ~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 96 (161)
T 3exq_A 23 QRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDDRQ------HRKLGLLYRAS 96 (161)
T ss_dssp CCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECSSCS------SEEEEEEEEEC
T ss_pred CEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccCCCC------eEEEEEEEEEe
Confidence 47999987753 3588999999999999999999999999999998899998877664321 23345556554
Q ss_pred ecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHH
Q 029131 129 VKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLK 171 (198)
Q Consensus 129 ~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~ 171 (198)
..... ....|..+++|++++++.++...+..+.++.. +++
T Consensus 97 ~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~ 136 (161)
T 3exq_A 97 NFTGT--LKASAEGQLSWLPITALTRENSAASLPEFLQV-FTG 136 (161)
T ss_dssp CEESC--CCGGGTTTEEEECGGGCCTTTBCTTHHHHHHH-HTT
T ss_pred ccCCc--cCCCccceEEEeeHHHhhhCccChHHHHHHHH-Hhh
Confidence 33222 22346678999999999998778888888888 665
No 31
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.82 E-value=6e-19 Score=128.99 Aligned_cols=109 Identities=19% Similarity=0.240 Sum_probs=84.2
Q ss_pred EEEEEEecC----CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTS----GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~----~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
+|||++|.. .+.|.||||++++||++.+||.||++||||+.+.....++.+.+..+.. ....++|.+.
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 92 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGR--------IIHLHAWHVP 92 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTE--------EEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCCc--------EEEEEEEEEE
Confidence 799998865 3679999999999999999999999999999998888888876654432 2345566554
Q ss_pred ecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHH
Q 029131 129 VKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKL 172 (198)
Q Consensus 129 ~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~ 172 (198)
..... ....|+.++.|++++++.++...+..+.++.. +++.
T Consensus 93 ~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~ 133 (140)
T 2rrk_A 93 DFHGT--LQAHEHQALVWCSPEEALQYPLAPADIPLLEA-FMAL 133 (140)
T ss_dssp EEEEC--CCCSSCSCEEEECHHHHTTSCCCTTHHHHHHH-HHHH
T ss_pred eeCCC--cCCCccceeEEeCHHHHhhCCCChhHHHHHHH-HHHH
Confidence 33221 12356778999999999998878888888888 6654
No 32
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.82 E-value=2.3e-19 Score=137.39 Aligned_cols=110 Identities=18% Similarity=0.086 Sum_probs=83.1
Q ss_pred EEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEe
Q 029131 53 EVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLV 129 (198)
Q Consensus 53 ~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 129 (198)
+|||++|.+ .+.|.||||++++||++.+||.||++||||+.+.....++.+.+...... .....++|.+..
T Consensus 37 ~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~------~~~~~~~f~~~~ 110 (176)
T 3q93_A 37 RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEP------ELMDVHVFCTDS 110 (176)
T ss_dssp EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCS------CEEEEEEEEESC
T ss_pred EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCC------cEEEEEEEEEEC
Confidence 899998865 35799999999999999999999999999999998899998876655421 233456666543
Q ss_pred cccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHH
Q 029131 130 KEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLK 171 (198)
Q Consensus 130 ~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~ 171 (198)
.... ....+..+++|++++++.++...+..+.++.. +++
T Consensus 111 ~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~ 149 (176)
T 3q93_A 111 IQGT--PVESDEMRPCWFQLDQIPFKDMWPDDSYWFPL-LLQ 149 (176)
T ss_dssp EESC--CCCCSSEEEEEEETTCCCGGGBCTTHHHHHHH-HHT
T ss_pred CCCC--cCCCcceeeEEeeHHHccccccCcchHHHHHH-HHc
Confidence 2221 12345667899999999988777777777766 544
No 33
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.82 E-value=5.9e-20 Score=137.24 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=67.5
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEE-----eccCCccCCCCCCceEEEEEEEE
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYD-----FKSKTLQDEFSPEGLCKAAMFAL 127 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~f~~ 127 (198)
+|||++|. .+.|.||||++++||++.+||+||++||||+.+.....++.+. +...... ......++|.+
T Consensus 34 ~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~f~~ 107 (153)
T 3eds_A 34 EILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTYSNGD-----EVEYIVVVFEC 107 (153)
T ss_dssp CEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEECTTSC-----EEEEEEEEEEE
T ss_pred eEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeecCCCC-----eEEEEEEEEEE
Confidence 68888877 7789999999999999999999999999999999888888763 2222210 11234566766
Q ss_pred EecccccCCCCCcccceEEEehhHHHHhc
Q 029131 128 LVKEELESWPEQSTRQRSWLTVPEAIECC 156 (198)
Q Consensus 128 ~~~~~~~~~~~~e~~~~~W~~~~e~~~~~ 156 (198)
..........++|..+++|++++++.++.
T Consensus 108 ~~~~~~~~~~~~E~~~~~W~~~~el~~l~ 136 (153)
T 3eds_A 108 EVTSGELRSIDGESLKLQYFSLSEKPPLA 136 (153)
T ss_dssp EEEEECCC-------CEEEECGGGCCCBS
T ss_pred EecCCccccCCCcEEEEEEECHHHCchhc
Confidence 65543333345678899999999998874
No 34
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.82 E-value=2.6e-19 Score=138.58 Aligned_cols=115 Identities=17% Similarity=0.143 Sum_probs=85.4
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEeccc
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEE 132 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 132 (198)
+|||++|...+.|.||||++++||++.+||+||++||||+.+...++++.+.+........ ......++|.+.....
T Consensus 16 ~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~f~a~~~~~ 92 (188)
T 3fk9_A 16 QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKI---VSEWMLFTFKATEHEG 92 (188)
T ss_dssp EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEE---EEEEEEEEEEESCEES
T ss_pred EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcc---eEEEEEEEEEEECCCC
Confidence 7999999888889999999999999999999999999999999888888877666443110 0111344555442222
Q ss_pred ccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHH
Q 029131 133 LESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKL 172 (198)
Q Consensus 133 ~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~ 172 (198)
. ..+..+..+++|++++++.++...+..+.++.. ++++
T Consensus 93 ~-~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~-~l~~ 130 (188)
T 3fk9_A 93 E-MLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKH-VLHS 130 (188)
T ss_dssp C-CCSEETTEEEEEEEGGGGGGSCCCHHHHHHHHH-HTTC
T ss_pred C-CcCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHH-HHcC
Confidence 1 223344568999999999998878888888877 6543
No 35
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.82 E-value=2.1e-19 Score=133.10 Aligned_cols=96 Identities=22% Similarity=0.109 Sum_probs=64.1
Q ss_pred EEEEEEecCC--C--CEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTSG--P--GLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~~--~--~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
++||+++++. + .|.||||++++|||+++||.||++||||+.+.....++.+.. .+.. .....++|.+.
T Consensus 18 ~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~~-~~~~-------~~~~~~~f~~~ 89 (145)
T 2w4e_A 18 EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGFYP-QPSI-------SGVVFYPLLAL 89 (145)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCBBS-CTTT-------CCCEEEEEEEE
T ss_pred EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecCcC-CCCc-------cCceEEEEEEE
Confidence 6877765432 2 599999999999999999999999999999887777665321 1111 11245556554
Q ss_pred -ecccccCCCCCcccceEEEehhHHHHhc
Q 029131 129 -VKEELESWPEQSTRQRSWLTVPEAIECC 156 (198)
Q Consensus 129 -~~~~~~~~~~~e~~~~~W~~~~e~~~~~ 156 (198)
.........+.|..+++|++++++.+++
T Consensus 90 ~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 118 (145)
T 2w4e_A 90 GVTLGAAQLEDTETIERVVLPLAEVYRML 118 (145)
T ss_dssp EEEEC--------CEEEEEEEHHHHHHHH
T ss_pred ecccCCCCCCCCCeEEEEEEeHHHHHHHH
Confidence 3222222345678889999999999876
No 36
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.82 E-value=1.1e-18 Score=130.27 Aligned_cols=98 Identities=20% Similarity=0.217 Sum_probs=76.5
Q ss_pred EEEEEEecC-------CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEE
Q 029131 53 EVLMINSTS-------GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMF 125 (198)
Q Consensus 53 ~vLLv~r~~-------~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f 125 (198)
++||++|.. .+.|.||||++++||++.+||+||++||||+.+.....++.+.+..+.. .....++|
T Consensus 26 ~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~-------~~~~~~~f 98 (159)
T 1sjy_A 26 DILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPDG-------VLILRHVW 98 (159)
T ss_dssp CEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECTTS-------CEEEEEEE
T ss_pred CEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccCCC-------ceEEEEEE
Confidence 689998874 3579999999999999999999999999999999888888877553321 23456777
Q ss_pred EEEecccc-cCC-CCCcccceEEEehhHHHHhcC
Q 029131 126 ALLVKEEL-ESW-PEQSTRQRSWLTVPEAIECCR 157 (198)
Q Consensus 126 ~~~~~~~~-~~~-~~~e~~~~~W~~~~e~~~~~~ 157 (198)
.+...... ... .++|..++.|++++++.+++.
T Consensus 99 ~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 132 (159)
T 1sjy_A 99 LAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYA 132 (159)
T ss_dssp EEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHH
T ss_pred EEEccCCCccccCCCCceeEEEEecHHHHHHhhh
Confidence 77764433 222 456778899999999999763
No 37
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.81 E-value=6.2e-19 Score=134.73 Aligned_cols=114 Identities=27% Similarity=0.305 Sum_probs=82.9
Q ss_pred EEEEEEecC-----CCCEEe-cceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEE
Q 029131 53 EVLMINSTS-----GPGLLF-PKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFA 126 (198)
Q Consensus 53 ~vLLv~r~~-----~~~W~l-PgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~ 126 (198)
+|||++|.. .+.|.| |||++++||++.+||+||++||||+.+.....++.+.+.... .....++|.
T Consensus 50 ~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~--------~~~~~~~f~ 121 (180)
T 2fkb_A 50 KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKN--------CRVWGALFS 121 (180)
T ss_dssp CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEEETT--------EEEEEEEEE
T ss_pred EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEecCCC--------ceEEEEEEE
Confidence 688888764 245999 999999999999999999999999998878888877654332 133566676
Q ss_pred EEecccccCCCCCcccceEEEehhHHHHhc--CChHHHHHHHHHHHHHHhhc
Q 029131 127 LLVKEELESWPEQSTRQRSWLTVPEAIECC--RHPWMQEALEKGFLKLYADH 176 (198)
Q Consensus 127 ~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~--~~~~~~~~l~~~~~~~l~~~ 176 (198)
+...... .....|+.+++|++++++.+++ ..+..+.++.. ++.+....
T Consensus 122 ~~~~~~~-~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~-~~~~~~~~ 171 (180)
T 2fkb_A 122 CVSHGPF-ALQEDEVSEVCWLTPEEITARCDEFTPDSLKALAL-WMKRNAKN 171 (180)
T ss_dssp EECCCCC-CCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHH-HHHHC---
T ss_pred EecCCCc-CCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHH-HHHhhcCC
Confidence 6633322 2235678889999999999974 35777777777 66554433
No 38
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.81 E-value=4.6e-19 Score=138.16 Aligned_cols=130 Identities=15% Similarity=0.207 Sum_probs=84.2
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC--CCCEEecceecCCCCCHHHHHHHHHHHHhCceee
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS--GPGLLFPKGGWENDETVEEAALREALEEAGVRGH 95 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~--~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~ 95 (198)
..+.++++++++.. ..+|||++++. .+.|.||||++++||++.+||+||++||||+.+.
T Consensus 24 ~~~v~v~~~v~~~~-------------------~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~ 84 (199)
T 3h95_A 24 SHQVGVAGAVFDES-------------------TRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSE 84 (199)
T ss_dssp --CCEEEEEEEETT-------------------TTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEE
T ss_pred cccceEEEEEEeCC-------------------CCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccc
Confidence 34566677777654 34899999876 5679999999999999999999999999999998
Q ss_pred eceeeEEEE-eccCCccCCCCCCceEEEEEEEEEec--ccccCCCCCcccceEEEehhHHHHhcCC-hHHHHHHHHHHHH
Q 029131 96 LKEFLGYYD-FKSKTLQDEFSPEGLCKAAMFALLVK--EELESWPEQSTRQRSWLTVPEAIECCRH-PWMQEALEKGFLK 171 (198)
Q Consensus 96 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~e~~~~~W~~~~e~~~~~~~-~~~~~~l~~~~~~ 171 (198)
..+.++... +..+.. ......+|.+.+. .......++|..+++|++++++.++... +....++.. +..
T Consensus 85 ~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~-~~~ 156 (199)
T 3h95_A 85 FRSVLSIRQQHTNPGA-------FGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARL-LLY 156 (199)
T ss_dssp EEEEEEEEECC----------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSBCHHHHHHHHH-HHH
T ss_pred cceEEEEEeeecCCCC-------ceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhcChHHHHHHHH-HHh
Confidence 777776532 222211 0112233333332 2222233568889999999999997644 444444444 444
Q ss_pred HHh
Q 029131 172 LYA 174 (198)
Q Consensus 172 ~l~ 174 (198)
...
T Consensus 157 ~~~ 159 (199)
T 3h95_A 157 GYR 159 (199)
T ss_dssp HHH
T ss_pred hhh
Confidence 333
No 39
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.81 E-value=9.3e-19 Score=132.49 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=92.1
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeec
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLK 97 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~ 97 (198)
.+|.++++++++.+ .+|||+++...+.|.+|||++++||++.+||.||++||||+.+...
T Consensus 6 ~~~~~v~~~i~~~~--------------------~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~ 65 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ--------------------GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDV 65 (164)
T ss_dssp SEEEEEEEEEECTT--------------------SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCcEEEEEEEccC--------------------CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccce
Confidence 57888888888654 2799999887778999999999999999999999999999998877
Q ss_pred eeeEEEE----eccCCccCCC--CC-CceEEEEEEEEEeccc-ccC--C--CCCcccceEEEehhHHHHhcC---ChHHH
Q 029131 98 EFLGYYD----FKSKTLQDEF--SP-EGLCKAAMFALLVKEE-LES--W--PEQSTRQRSWLTVPEAIECCR---HPWMQ 162 (198)
Q Consensus 98 ~~l~~~~----~~~~~~~~~~--~~-~~~~~~~~f~~~~~~~-~~~--~--~~~e~~~~~W~~~~e~~~~~~---~~~~~ 162 (198)
.+++.+. |..+.....+ .+ ......++|.+.+... ... . +..|+.+++|++++++.+.+. .+.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~ 145 (164)
T 2kdv_A 66 RILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYR 145 (164)
T ss_dssp EEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHH
T ss_pred EEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHH
Confidence 7777643 2222211000 00 0123456777765432 111 1 235788899999999876532 34455
Q ss_pred HHHHHHHHHHH
Q 029131 163 EALEKGFLKLY 173 (198)
Q Consensus 163 ~~l~~~~~~~l 173 (198)
.++.. |..++
T Consensus 146 ~~l~~-l~~~l 155 (164)
T 2kdv_A 146 RVMKE-FASVV 155 (164)
T ss_dssp HHHHH-HHHHH
T ss_pred HHHHH-HHHHH
Confidence 55655 55544
No 40
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.81 E-value=2.8e-19 Score=135.49 Aligned_cols=105 Identities=17% Similarity=0.158 Sum_probs=77.0
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEeccc
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEE 132 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 132 (198)
++||++++ .+.|.||||++++||++.+||.||++||||+++.....++.+.+.. ...++|.+.+.+.
T Consensus 28 ~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~------------~~~~~f~~~~~~~ 94 (163)
T 3f13_A 28 GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITPF------------NAHKVYLCIAQGQ 94 (163)
T ss_dssp EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECSS------------EEEEEEEEEC-CC
T ss_pred EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecCC------------eEEEEEEEEECCc
Confidence 68998876 5789999999999999999999999999999998888887765433 1455666665433
Q ss_pred ccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHh
Q 029131 133 LESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 133 ~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~ 174 (198)
. .+.+|..+++|++ .+...+...+..+.++.. +.+...
T Consensus 95 ~--~~~~E~~~~~W~~-~~~~~~~l~~~~~~il~~-~~~~~~ 132 (163)
T 3f13_A 95 P--KPQNEIERIALVS-SPDTDMDLFVEGRAILRR-YARLRN 132 (163)
T ss_dssp C--CCCTTCCEEEEES-STTCSSCBCHHHHHHHHH-HHHHTT
T ss_pred C--ccCCCceEEEEEC-cccccCCCCHHHHHHHHH-HHHhhh
Confidence 2 3345788999999 444454556777888877 766544
No 41
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.81 E-value=1.7e-19 Score=134.50 Aligned_cols=108 Identities=15% Similarity=0.176 Sum_probs=76.3
Q ss_pred EEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEeccc
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEE 132 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 132 (198)
+|||++| .+.|.||||++++||++.+||.||++||||+.+...+.++.+.+....... ..+...++|.+.....
T Consensus 31 ~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~~~~ 104 (154)
T 2pqv_A 31 KLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGV----SYHNIEFHYLVDLLED 104 (154)
T ss_dssp EEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETTE----EEEEEEEEEEEEESSC
T ss_pred EEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCCC----cceEEEEEEEEEecCC
Confidence 7999998 678999999999999999999999999999999888877776544332211 0122445666665433
Q ss_pred ccC--CCCCcccceEEEehhHHHHhcCCh-HHHHHHH
Q 029131 133 LES--WPEQSTRQRSWLTVPEAIECCRHP-WMQEALE 166 (198)
Q Consensus 133 ~~~--~~~~e~~~~~W~~~~e~~~~~~~~-~~~~~l~ 166 (198)
... .+++|..+++|++++++.++...| ..+.++.
T Consensus 105 ~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~ 141 (154)
T 2pqv_A 105 APLTMQEDEKRQPCEWIDLDKLQNIQLVPVFLKTALP 141 (154)
T ss_dssp CCSEEEETTEEEEEEEEEGGGGGGSCEESTTHHHHTT
T ss_pred CCcccCCCCceeeEEEeEHHHHhhcCcCcHHHHHHhh
Confidence 221 234567789999999999875333 3344443
No 42
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.81 E-value=6.4e-19 Score=131.95 Aligned_cols=110 Identities=17% Similarity=0.209 Sum_probs=82.3
Q ss_pred EEEEEEecCC----CCEEecceecCCCCCHHHHHHHHHHHHhCceeeecee--eEEEEeccCCccCCCCCCceEEEEEEE
Q 029131 53 EVLMINSTSG----PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEF--LGYYDFKSKTLQDEFSPEGLCKAAMFA 126 (198)
Q Consensus 53 ~vLLv~r~~~----~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~f~ 126 (198)
+|||++|... +.|.||||++++||++.+||.||++||||+.+..... +..+.+..... ....++|.
T Consensus 42 ~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 113 (158)
T 3hhj_A 42 RVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETF--------HLLMPLYF 113 (158)
T ss_dssp EEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSC--------EEEEEEEE
T ss_pred EEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCc--------EEEEEEEE
Confidence 7999998753 4699999999999999999999999999999887644 44444443322 33455665
Q ss_pred EEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHH
Q 029131 127 LLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLY 173 (198)
Q Consensus 127 ~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l 173 (198)
+..... .....|..+++|++++++.++...+..+.++.. +.+++
T Consensus 114 ~~~~~~--~~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~-~~~~l 157 (158)
T 3hhj_A 114 CSHYKG--VAQGREGQNLKWIFINDLDKYPMPEADKPLVQV-LKNFF 157 (158)
T ss_dssp ESCCBS--CCCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHH-HHHC-
T ss_pred EEECCC--ccCCccccceEEEcHHHHhhCCCCcchHHHHHH-HHHhc
Confidence 554332 123456778999999999998888888888888 76643
No 43
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.80 E-value=1.5e-18 Score=135.36 Aligned_cols=100 Identities=20% Similarity=0.143 Sum_probs=74.1
Q ss_pred EEEEEEecCCC----CEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTSGP----GLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~~~----~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
+|||+++...+ .|+||||++++||++++||.||++||||+.+.....++.+....... ....++|.+.
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~--------~~~~~~f~a~ 132 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYF--------SSKMNIVVAQ 132 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTC--------CCEEEEEEEE
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCcc--------CcEEEEEEEE
Confidence 79999875433 49999999999999999999999999999999888888775332221 1245566665
Q ss_pred eccc-ccCCCCCcccceEEEehhHHHHhcCChH
Q 029131 129 VKEE-LESWPEQSTRQRSWLTVPEAIECCRHPW 160 (198)
Q Consensus 129 ~~~~-~~~~~~~e~~~~~W~~~~e~~~~~~~~~ 160 (198)
.... .....++|..++.|++++++.+++..+.
T Consensus 133 ~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~ 165 (198)
T 1vhz_A 133 DLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPD 165 (198)
T ss_dssp EEEECCCCCCCSSCCCEEEEEGGGGGGGGGCTT
T ss_pred eCCcccCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 3322 2223456778899999999999875443
No 44
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.80 E-value=5.5e-19 Score=129.91 Aligned_cols=111 Identities=21% Similarity=0.169 Sum_probs=82.4
Q ss_pred EEEEEEecCC----CCEEecceecCCCCCHHHHHHHHHHHHhCceeeece--eeEEEEeccCCccCCCCCCceEEEEEEE
Q 029131 53 EVLMINSTSG----PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKE--FLGYYDFKSKTLQDEFSPEGLCKAAMFA 126 (198)
Q Consensus 53 ~vLLv~r~~~----~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~f~ 126 (198)
+|||++|... +.|.||||+++.||++.+||.||++||||+.+.... .+..+.+.... .....++|.
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 92 (144)
T 3r03_A 21 RVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDT--------FHLLMPLYA 92 (144)
T ss_dssp CEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS--------SEEEEEEEE
T ss_pred EEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCC--------eEEEEEEEE
Confidence 6999998753 569999999999999999999999999999988773 34334444332 234566666
Q ss_pred EEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHh
Q 029131 127 LLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 127 ~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~ 174 (198)
+...... ....|..+++|++++++.++...+..+.+++. +.++..
T Consensus 93 ~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~~~~ 137 (144)
T 3r03_A 93 CRSWRGR--ATAREGQTLAWVRAERLREYPMPPADLPLIPI-LQDWLE 137 (144)
T ss_dssp ECCCBSC--CCCCSSCEEEEECGGGGGGSCCCTTTTTHHHH-HHHHC-
T ss_pred EEecCCc--cCCCCcceEEEEeHHHhccCCCCcchHHHHHH-HhCccc
Confidence 6544332 22456778999999999998878888888877 665543
No 45
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.80 E-value=5.5e-19 Score=144.04 Aligned_cols=112 Identities=14% Similarity=0.097 Sum_probs=86.5
Q ss_pred EEEEEEecC--CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEec
Q 029131 53 EVLMINSTS--GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVK 130 (198)
Q Consensus 53 ~vLLv~r~~--~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 130 (198)
+|||+++.. .+.|.||||++|+|||+++||.||++||||+++...++++.+.+..+.. ...+|.+...
T Consensus 152 ~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~~~~~~----------~~~~f~a~~~ 221 (269)
T 1vk6_A 152 SILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQS----------LMTAFMAEYD 221 (269)
T ss_dssp EEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEETTEE----------EEEEEEEEEE
T ss_pred EEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEecCCCCE----------EEEEEEEEEC
Confidence 899999876 4579999999999999999999999999999999989998877655432 4566666654
Q ss_pred ccccCCCCCcccceEEEehhHHHHhcCChH-HHHHHHHHHHHHHhh
Q 029131 131 EELESWPEQSTRQRSWLTVPEAIECCRHPW-MQEALEKGFLKLYAD 175 (198)
Q Consensus 131 ~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~-~~~~l~~~~~~~l~~ 175 (198)
.......++|..+++|++++++..+..... .+.++.. ++.++..
T Consensus 222 ~~~~~~~~~E~~~~~W~~~~el~~l~~~~si~~~li~~-~l~~~r~ 266 (269)
T 1vk6_A 222 SGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIED-TVAMCRA 266 (269)
T ss_dssp ECCCCCCTTTEEEEEEEETTSCCSCCCTTSHHHHHHHH-HHHHHHH
T ss_pred CCCcCCCCcceEEEEEEEHHHhhhcccCcHHHHHHHHH-HHHHHHh
Confidence 332222346788999999999998765444 4566766 7777663
No 46
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.80 E-value=2e-18 Score=130.11 Aligned_cols=111 Identities=17% Similarity=0.099 Sum_probs=75.2
Q ss_pred EEEEEEecCC-----CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEE------EeccCCccCCCCCCceEE
Q 029131 53 EVLMINSTSG-----PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYY------DFKSKTLQDEFSPEGLCK 121 (198)
Q Consensus 53 ~vLLv~r~~~-----~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~ 121 (198)
+|||++|... +.|.||||++++||++.+||.||++||||+.+.....+... .+....... ......
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 116 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYADGRQ---EEIYMI 116 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--CCE---EEEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCCCCc---eeEEEE
Confidence 7999988753 56999999999999999999999999999998766554421 122222100 001112
Q ss_pred EEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHH
Q 029131 122 AAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEK 167 (198)
Q Consensus 122 ~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~ 167 (198)
.++|.+...... ....+|..+++|++++++.++...+..+.++..
T Consensus 117 ~~~~~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~ 161 (165)
T 3oga_A 117 YLIFDCVSANRD-ICINDEFQDYAWVKPEELALYDLNVATRHTLAL 161 (165)
T ss_dssp EEEEEEEESCCC-CCCCTTEEEEEEECGGGGGGSCBCHHHHHHHHH
T ss_pred EEEEEeeccCCC-ccCCchheeeEEccHHHHhhCCCCHHHHHHHHH
Confidence 334444433222 223467788999999999998778888877765
No 47
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.79 E-value=4.4e-19 Score=130.96 Aligned_cols=115 Identities=14% Similarity=0.188 Sum_probs=76.5
Q ss_pred cEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE-ec
Q 029131 52 VEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL-VK 130 (198)
Q Consensus 52 ~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~-~~ 130 (198)
.+|||+++...+.|.||||++++||++.+||.||++||||+.+.....+..+....... ....+|.+. ..
T Consensus 17 ~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 87 (146)
T 2jvb_A 17 SKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERNIQG---------KNYKIFLISGVS 87 (146)
T ss_dssp SEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEEETT---------EEEEEEEECCCC
T ss_pred CEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcccccccccccCC---------ceEEEEEEEecc
Confidence 48999998877889999999999999999999999999999887543333322211111 123344333 22
Q ss_pred c--cccCCCCCcccceEEEehhHHHHhcCCh-----HHHHHHHHHHHHHHhhc
Q 029131 131 E--ELESWPEQSTRQRSWLTVPEAIECCRHP-----WMQEALEKGFLKLYADH 176 (198)
Q Consensus 131 ~--~~~~~~~~e~~~~~W~~~~e~~~~~~~~-----~~~~~l~~~~~~~l~~~ 176 (198)
. .....+++|+.+++|++++++.+++... .+...+.. +..++..+
T Consensus 88 ~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~-l~~~~~~~ 139 (146)
T 2jvb_A 88 EVFNFKPQVRNEIDKIEWFDFKKISKTMYKSNIKYYLINSMMRP-LSMWLRHQ 139 (146)
T ss_dssp SSSCCCCCCSSSCCCEEEEEHHHHHTGGGCSSCCCHHHHHHHHH-HHHHHHHH
T ss_pred ccccCCcCCcchhheeEEeEHHHHHhhhcccchhhhhHHHHHHH-HHHHHHHh
Confidence 2 1122235678899999999999976433 23344455 66666543
No 48
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.79 E-value=1.9e-18 Score=128.72 Aligned_cols=125 Identities=19% Similarity=0.202 Sum_probs=88.1
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCC--CEEecceecCCCCCHHHHHHHHHHHHhCceeee
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGP--GLLFPKGGWENDETVEEAALREALEEAGVRGHL 96 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~--~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~ 96 (198)
.+.++++++++.+ .+...+||++|...+ .|.||||++++||++.+||.||++||||+.+..
T Consensus 7 ~~~~~~~ii~~~~-----------------~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~ 69 (155)
T 2b06_A 7 TILTNICLIEDLE-----------------TQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQN 69 (155)
T ss_dssp EEEEEEEEEEETT-----------------TTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEES
T ss_pred cEEEEEEEEEECC-----------------CCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccC
Confidence 5667777777643 123447887766532 389999999999999999999999999999998
Q ss_pred ceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHH
Q 029131 97 KEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFL 170 (198)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~ 170 (198)
...++.+.+..... .....++|.+...... ....|..+++|++++++.++...+..+.++.. +.
T Consensus 70 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~ 133 (155)
T 2b06_A 70 PQLVGIKNWPLDTG-------GRYIVICYKATEFSGT--LQSSEEGEVSWVQKDQIPNLNLAYDMLPLMEM-ME 133 (155)
T ss_dssp CEEEEEEEEECTTS-------CEEEEEEEEECEEEEC--CCCBTTBEEEEEEGGGGGGSCBCTTHHHHHHH-HH
T ss_pred CcEEEEEeeccCCC-------ceEEEEEEEEEecCCC--CCCCcceeeEEeeHHHhhhCCCChhHHHHHHH-Hh
Confidence 88888877665321 2345566665533221 12356778999999999998777777777766 54
No 49
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.79 E-value=1e-18 Score=131.04 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=86.0
Q ss_pred cccCceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC-CCCEEecceecCCCCCHHHHHHHHHHHHhCc
Q 029131 14 RYEAGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS-GPGLLFPKGGWENDETVEEAALREALEEAGV 92 (198)
Q Consensus 14 ~~~~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~-~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl 92 (198)
.....+|.++++++++.+ .+|||++|.. .+.|.+|||++++||++.+||+||++||||+
T Consensus 8 ~~~~~~~~~v~~~i~~~~--------------------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 67 (165)
T 1f3y_A 8 SPPEGYRRNVGICLMNND--------------------KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGV 67 (165)
T ss_dssp SCCSSCCCEEEEEEECTT--------------------SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCccceeeeEEEEEECCC--------------------CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCC
Confidence 444668888888888544 2689999875 3579999999999999999999999999999
Q ss_pred eeeeceeeEE--EEeccCCcc-----CCCCC-CceEEEEEEEEEecccc-cCC------CCCcccceEEEehhHHHHhcC
Q 029131 93 RGHLKEFLGY--YDFKSKTLQ-----DEFSP-EGLCKAAMFALLVKEEL-ESW------PEQSTRQRSWLTVPEAIECCR 157 (198)
Q Consensus 93 ~~~~~~~l~~--~~~~~~~~~-----~~~~~-~~~~~~~~f~~~~~~~~-~~~------~~~e~~~~~W~~~~e~~~~~~ 157 (198)
.+........ +.+..+... ..+.. ......++|.+.+.... ... +++|+.+++|++++++.+++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 68 TSAEVIAEVPYWLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp CSEEEEEECSSCCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred ChhhhhcccccceeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 8753321110 111111000 00000 00113455666654321 111 345788999999999999874
Q ss_pred ChHHHHHHHHHHHHHHh
Q 029131 158 HPWMQEALEKGFLKLYA 174 (198)
Q Consensus 158 ~~~~~~~l~~~~~~~l~ 174 (198)
.. ....+.+ +++.+.
T Consensus 148 ~~-~~~~~~~-~~~~l~ 162 (165)
T 1f3y_A 148 EF-KKPVYKE-VLSVFA 162 (165)
T ss_dssp GG-GHHHHHH-HHHHHG
T ss_pred hh-hHHHHHH-HHHHhh
Confidence 31 3344444 444444
No 50
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.79 E-value=1e-18 Score=133.95 Aligned_cols=97 Identities=21% Similarity=0.110 Sum_probs=71.0
Q ss_pred EEEEEEecC----CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTS----GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~----~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
++||+++.. .+.|.||||++++||++.+||+||++||||+.+.....++.+...... .....++|.+.
T Consensus 54 ~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~--------~~~~~~~f~~~ 125 (182)
T 2yvp_A 54 TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSF--------TAVVFHPFLAL 125 (182)
T ss_dssp EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTT--------BCCEEEEEEEC
T ss_pred EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCc--------cccEEEEEEEe
Confidence 789988764 346999999999999999999999999999998877777765322111 12345666665
Q ss_pred ecc--cccCCCCCcccceEEEehhHHHHhcC
Q 029131 129 VKE--ELESWPEQSTRQRSWLTVPEAIECCR 157 (198)
Q Consensus 129 ~~~--~~~~~~~~e~~~~~W~~~~e~~~~~~ 157 (198)
... ......+.|..+++|++++++.+++.
T Consensus 126 ~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 156 (182)
T 2yvp_A 126 KARVVTPPTLEEGELLESLELPLTEVYALLA 156 (182)
T ss_dssp SCEECSCCCCCTTCCEEEEEEEHHHHHHHHH
T ss_pred ccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 321 11223456788999999999999863
No 51
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.78 E-value=1.6e-18 Score=133.84 Aligned_cols=118 Identities=14% Similarity=0.110 Sum_probs=84.1
Q ss_pred EEEEEEecC-----CCCEEe-cceecCCCCCHHHHHHHHHHHHhCceeeec-eeeEEEEeccCCccCCCCCCceEEEEEE
Q 029131 53 EVLMINSTS-----GPGLLF-PKGGWENDETVEEAALREALEEAGVRGHLK-EFLGYYDFKSKTLQDEFSPEGLCKAAMF 125 (198)
Q Consensus 53 ~vLLv~r~~-----~~~W~l-PgG~ve~gEs~~eaa~REl~EEtGl~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~f 125 (198)
+|||++|.. .+.|.| |||++++||++++||+||++||||+.+... ..++.+.+........ ......++|
T Consensus 45 ~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~f 121 (190)
T 1hzt_A 45 QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGI---VENEVCPVF 121 (190)
T ss_dssp CEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTSC---EEEEECCEE
T ss_pred EEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCCC---cceEEEEEE
Confidence 689988864 357999 999999999999999999999999998877 7776655432221100 012345666
Q ss_pred EEEecccccCCCCCcccceEEEehhHHHHhc------CChHHHHHHHHHHHHHHhh
Q 029131 126 ALLVKEELESWPEQSTRQRSWLTVPEAIECC------RHPWMQEALEKGFLKLYAD 175 (198)
Q Consensus 126 ~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~------~~~~~~~~l~~~~~~~l~~ 175 (198)
.+...... ...++|..+++|++++++.+++ ..|.++.+++. +..+..-
T Consensus 122 ~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~-~~~~~~~ 175 (190)
T 1hzt_A 122 AARTTSAL-QINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATN-REARKRL 175 (190)
T ss_dssp EEEBCSCC-CCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHS-HHHHHHH
T ss_pred EEecCCCC-cCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHH-HHHHHhh
Confidence 66655432 2235678889999999998874 45667777777 7666544
No 52
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.78 E-value=4.6e-18 Score=138.86 Aligned_cols=139 Identities=19% Similarity=0.231 Sum_probs=95.8
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHhCcee
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEAGVRG 94 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~ 94 (198)
.+..++++|++..+.. .+..+|||++|.. .+.|.||||++++||++.+||.||++||||+.+
T Consensus 37 ~p~v~v~~vv~~~~~~---------------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v 101 (273)
T 2fml_A 37 KPSLTVDMVLLCYNKE---------------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVI 101 (273)
T ss_dssp CCEEEEEEEEEEEETT---------------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCC
T ss_pred CCceEEEEEEEEEcCC---------------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCC
Confidence 4578889999987610 1256899999876 356999999999999999999999999999876
Q ss_pred eec--eeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhc----------------
Q 029131 95 HLK--EFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECC---------------- 156 (198)
Q Consensus 95 ~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~---------------- 156 (198)
... ..++.|....... ..+...++|.+.+.... ..+.+|..+++|++++++.+.+
T Consensus 102 ~~~~l~~l~~~~~~~r~~------~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~ 174 (273)
T 2fml_A 102 SQENIEQLHSFSRPDRDP------RGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTA 174 (273)
T ss_dssp CGGGEEEEEEECCTTSST------TSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTC
T ss_pred CcCcEEEEEEEcCCCCCC------CceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccc
Confidence 543 5565554333221 12345666766655433 3455678889999999865432
Q ss_pred -------CChHHHHHHHHHHHHHHhhcccc
Q 029131 157 -------RHPWMQEALEKGFLKLYADHMIS 179 (198)
Q Consensus 157 -------~~~~~~~~l~~~~~~~l~~~~~~ 179 (198)
.......++.. .+.++..+...
T Consensus 175 ~~~~~~~LafdH~~Il~~-al~rlr~kl~y 203 (273)
T 2fml_A 175 ASLGKDTLAFDHSEIIIK-AFNRVVDKMEH 203 (273)
T ss_dssp CBCSSSCCSTTHHHHHHH-HHHHHHHHTTT
T ss_pred cccCCCcccccHHHHHHH-HHHHHHHHhcC
Confidence 12334566776 66777666543
No 53
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.78 E-value=4.6e-18 Score=129.03 Aligned_cols=96 Identities=23% Similarity=0.173 Sum_probs=67.0
Q ss_pred EEEEEEecC----CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTS----GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~----~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
++||+++.+ .+.|.||||++++||++.+||.||++||||+ +.....++.+...... .....++|.+.
T Consensus 46 ~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~--------~~~~~~~f~~~ 116 (170)
T 1v8y_A 46 RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVSPGF--------TDEKTHVFLAE 116 (170)
T ss_dssp EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTT--------BCCEEEEEEEE
T ss_pred EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecCCCc--------cccEEEEEEEE
Confidence 789988754 3469999999999999999999999999999 8877888776432221 12245666665
Q ss_pred ecc-cccCCCCCcccceEEEehhHHHHhcC
Q 029131 129 VKE-ELESWPEQSTRQRSWLTVPEAIECCR 157 (198)
Q Consensus 129 ~~~-~~~~~~~~e~~~~~W~~~~e~~~~~~ 157 (198)
... ......+.|..+++|++++++.+++.
T Consensus 117 ~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 146 (170)
T 1v8y_A 117 NLKEVEAHPDEDEAIEVVWMRPEEALERHQ 146 (170)
T ss_dssp EEEECC--------CEEEEECHHHHHHHHH
T ss_pred eccccCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 432 22222356788999999999999763
No 54
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.77 E-value=2.5e-19 Score=129.17 Aligned_cols=105 Identities=18% Similarity=0.200 Sum_probs=79.0
Q ss_pred EEEEEEecCC----CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTSG----PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~~----~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
+|||++|... +.|.||||++++||++.+||.||++||||+.+.....++.+.+..+.. ....++|.+.
T Consensus 17 ~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 88 (129)
T 1mut_A 17 EIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDR--------HITLWFWLVE 88 (129)
T ss_dssp EEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSC--------EEECCCEEEE
T ss_pred EEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCCc--------eEEEEEEEEE
Confidence 8999998764 679999999999999999999999999999988777776654433321 2234566665
Q ss_pred ecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHH
Q 029131 129 VKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEK 167 (198)
Q Consensus 129 ~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~ 167 (198)
...... ...|..+++|++++++.++...+..+.+++.
T Consensus 89 ~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 125 (129)
T 1mut_A 89 RWEGEP--WGKEGQPGEWMSLVGLNADDFPPANEPVIAK 125 (129)
T ss_dssp ECSSCC--CCCSSCCCEEEESSSCCTTTSCTTCHHHHHH
T ss_pred ccCCcc--CCcccceeEEeCHHHcccccCCchhHHHHHH
Confidence 443221 2356778999999999988766667777765
No 55
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.77 E-value=1.6e-18 Score=144.83 Aligned_cols=128 Identities=15% Similarity=0.159 Sum_probs=84.3
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC---CCCEEecceecCCCCCHHHHHHHHHHHHhCceee
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS---GPGLLFPKGGWENDETVEEAALREALEEAGVRGH 95 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~---~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~ 95 (198)
.+.++++++++.+ +|||+++.. .+.|.||||++|+||++++||.||++||||+++.
T Consensus 202 ~~~~v~~vi~~~~---------------------~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~ 260 (341)
T 2qjo_A 202 TFITTDAVVVQAG---------------------HVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVP 260 (341)
T ss_dssp CEEEEEEEEEETT---------------------EEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSC
T ss_pred CceEEEEEEEeCC---------------------EEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccc
Confidence 4577777777433 799999876 4569999999999999999999999999999988
Q ss_pred eceeeE----EEEeccCCccCCCCCCceEEEEEEEEEecccc--cCCCCCcccceEEEehhHHHHh--cCChHHHHHHHH
Q 029131 96 LKEFLG----YYDFKSKTLQDEFSPEGLCKAAMFALLVKEEL--ESWPEQSTRQRSWLTVPEAIEC--CRHPWMQEALEK 167 (198)
Q Consensus 96 ~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~e~~~~--~~~~~~~~~l~~ 167 (198)
...+++ ...+..+... +..+...++|.+...... ...+++|..+++|++++++.++ ...+..+.++..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~ 336 (341)
T 2qjo_A 261 LPVLRGSIVDSHVFDAPGRS----LRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQH 336 (341)
T ss_dssp HHHHHHTEEEEEEECCTTSC----TTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHH
T ss_pred cccccccccceEEEeCCCCC----CCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHH
Confidence 654432 2223322211 011234556666644322 1234567889999999999997 567777888877
Q ss_pred HHHHH
Q 029131 168 GFLKL 172 (198)
Q Consensus 168 ~~~~~ 172 (198)
++.+
T Consensus 337 -~~~~ 340 (341)
T 2qjo_A 337 -FVSK 340 (341)
T ss_dssp -HC--
T ss_pred -HHhc
Confidence 6554
No 56
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.76 E-value=2.7e-18 Score=133.15 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=70.6
Q ss_pred cEEEEEEecC----------CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEE
Q 029131 52 VEVLMINSTS----------GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCK 121 (198)
Q Consensus 52 ~~vLLv~r~~----------~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 121 (198)
.++||+++.+ .+.|+||||+++ ||++.+||+||++||||+.+.....++.+....... ...
T Consensus 58 ~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~~~~--------~~~ 128 (191)
T 3o6z_A 58 KTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGV--------TEL 128 (191)
T ss_dssp TEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCTTTB--------CCE
T ss_pred CEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCCCcc--------CcE
Confidence 3789888753 345999999999 999999999999999999998888888753322111 225
Q ss_pred EEEEEEEeccccc----CCCCCcccceEEEehhHHHHhcCCh
Q 029131 122 AAMFALLVKEELE----SWPEQSTRQRSWLTVPEAIECCRHP 159 (198)
Q Consensus 122 ~~~f~~~~~~~~~----~~~~~e~~~~~W~~~~e~~~~~~~~ 159 (198)
.++|.+....... ...++|..++.|++++++.+++...
T Consensus 129 ~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 129 IHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp EEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHS
T ss_pred EEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 6677776543211 1125688899999999999987433
No 57
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.76 E-value=3.2e-18 Score=135.52 Aligned_cols=91 Identities=19% Similarity=0.069 Sum_probs=64.1
Q ss_pred CCEEecceecCC-CCCHHHHHHHHHHHHhCcee--eeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccc------
Q 029131 63 PGLLFPKGGWEN-DETVEEAALREALEEAGVRG--HLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEEL------ 133 (198)
Q Consensus 63 ~~W~lPgG~ve~-gEs~~eaa~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~------ 133 (198)
..|+||||++|+ ||++++||+||++||||+.+ ..+..++.+....... ....++|.+.+....
T Consensus 95 ~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~--------~~~~~~f~a~~~~~~~~~~~~ 166 (218)
T 3q91_A 95 VTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLT--------GSRQTMFYTEVTDAQRSGPGG 166 (218)
T ss_dssp EEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---C--------CEEEEEEEEEECGGGBCC---
T ss_pred eEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCcc--------ceEEEEEEEEECCcccccCCC
Confidence 359999999999 99999999999999999998 6667777654322211 235677777655321
Q ss_pred cCCCCCcccceEEEehhHHHHhcCChHH
Q 029131 134 ESWPEQSTRQRSWLTVPEAIECCRHPWM 161 (198)
Q Consensus 134 ~~~~~~e~~~~~W~~~~e~~~~~~~~~~ 161 (198)
....++|..++.|++++++.+++....+
T Consensus 167 ~~~d~~E~~ev~wv~l~el~~~i~~g~i 194 (218)
T 3q91_A 167 GLVEEGELIEVVHLPLEGAQAFADDPDI 194 (218)
T ss_dssp ------CCEEEEEEEGGGHHHHHHCTTS
T ss_pred CCCCCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 1223568889999999999998755444
No 58
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.76 E-value=9.1e-18 Score=131.65 Aligned_cols=99 Identities=16% Similarity=0.119 Sum_probs=67.7
Q ss_pred EEEEEEecCC----CCEEecceecC-CCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEE
Q 029131 53 EVLMINSTSG----PGLLFPKGGWE-NDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFAL 127 (198)
Q Consensus 53 ~vLLv~r~~~----~~W~lPgG~ve-~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 127 (198)
+|||+++... +.|.||||+++ +||++.+||+||++||||+.+.....++.+ +..+.. .....++|.+
T Consensus 56 ~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~-~~~~~~-------~~~~~~~f~~ 127 (207)
T 1mk1_A 56 NIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDL-DTAPGF-------SDESVRVYLA 127 (207)
T ss_dssp EEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEE-CSCTTT-------BCCCEEEEEE
T ss_pred EEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEE-EcCCCc-------cccEEEEEEE
Confidence 7899887643 35999999999 999999999999999999999988888766 333221 1113556666
Q ss_pred Eeccc-ccC--CCCCcccceEEEehhHHHHhcCCh
Q 029131 128 LVKEE-LES--WPEQSTRQRSWLTVPEAIECCRHP 159 (198)
Q Consensus 128 ~~~~~-~~~--~~~~e~~~~~W~~~~e~~~~~~~~ 159 (198)
..... ... ..+.|+.++.|++++++.+++..+
T Consensus 128 ~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 128 TGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp EEEEECCC----------CEEEEEHHHHHHHHHTT
T ss_pred EccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 53322 211 235678899999999999986433
No 59
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.75 E-value=7.1e-18 Score=141.75 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=82.7
Q ss_pred EEEEEEecCC---CCEEecceecCCCCCHHHHHHHHHHHHhCceeeecee----eEEEEeccCCccCCCCCCceEEEEEE
Q 029131 53 EVLMINSTSG---PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEF----LGYYDFKSKTLQDEFSPEGLCKAAMF 125 (198)
Q Consensus 53 ~vLLv~r~~~---~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~f 125 (198)
+|||+++... +.|.||||++|+|||+++||.||++||||+++..... .....+..+.... ..+...++|
T Consensus 220 ~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~f 295 (352)
T 2qjt_B 220 HILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSV----RGRTISHVG 295 (352)
T ss_dssp EEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTSCT----TSEEEEEEE
T ss_pred EEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCCCC----CccEEEEEE
Confidence 7999998763 5699999999999999999999999999999875432 2222233222110 112345556
Q ss_pred EEEecccc--c-CCCCCcccceEEEeh-hHHHHh--cCChHHHHHHHHHHHHHH
Q 029131 126 ALLVKEEL--E-SWPEQSTRQRSWLTV-PEAIEC--CRHPWMQEALEKGFLKLY 173 (198)
Q Consensus 126 ~~~~~~~~--~-~~~~~e~~~~~W~~~-~e~~~~--~~~~~~~~~l~~~~~~~l 173 (198)
.+.+.... . ...++|..+++|+++ +++.++ ...+..+.++.. +++++
T Consensus 296 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~-~~~~l 348 (352)
T 2qjt_B 296 LFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITI-LLEEC 348 (352)
T ss_dssp EEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHH-HHHHT
T ss_pred EEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHH-HHHHh
Confidence 66544322 1 223567889999999 999996 567888889988 88877
No 60
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.75 E-value=4.7e-18 Score=131.58 Aligned_cols=112 Identities=22% Similarity=0.125 Sum_probs=81.5
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC-----CCCEEecceecCCCCCHHHHHHHHHHHHhCc
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS-----GPGLLFPKGGWENDETVEEAALREALEEAGV 92 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl 92 (198)
..+.++++++++.+ +..+|||++|.. .+.|.||||++++||++.+||+||++||||+
T Consensus 32 ~~~~~~~~v~i~~~------------------~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 93 (194)
T 1nqz_A 32 HYRRAAVLVALTRE------------------ADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVAL 93 (194)
T ss_dssp -CEEEEEEEEEESS------------------SSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEecC------------------CCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCC
Confidence 35666777777333 334789998864 3579999999999999999999999999999
Q ss_pred eeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecccc--cCCCCCcccceEEEehhHH-HHh
Q 029131 93 RGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEEL--ESWPEQSTRQRSWLTVPEA-IEC 155 (198)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~e~-~~~ 155 (198)
++.....++.+.+..... ....++|.+...... ....++|..++.|++++++ .+.
T Consensus 94 ~~~~~~~l~~~~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 94 DPAAVTLLGELDDVFTPV--------GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp CGGGCEEEEECCCEEETT--------TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred CccceEEEEEccCccCCC--------CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCC
Confidence 998888888765443321 234566777665322 2334567889999999999 664
No 61
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.75 E-value=2.6e-17 Score=122.88 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=79.4
Q ss_pred cEEEEEEecCC----CCEEecceecCCCCCHH-HHHHHHHHHHhC-ceeeeceeeEEEEeccCCccCCCCCCceEEEEEE
Q 029131 52 VEVLMINSTSG----PGLLFPKGGWENDETVE-EAALREALEEAG-VRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMF 125 (198)
Q Consensus 52 ~~vLLv~r~~~----~~W~lPgG~ve~gEs~~-eaa~REl~EEtG-l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f 125 (198)
.+|||++|... +.|+||||+++.||++. +||.||++|||| +.+.....++.+.+.+... ....++|
T Consensus 34 ~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~~~~--------~~~~~~~ 105 (155)
T 1x51_A 34 AQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHI--------KLTYQVY 105 (155)
T ss_dssp EEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBCSSC--------EEEEEEE
T ss_pred CEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEecCCc--------cEEEEEE
Confidence 48999988753 46999999999999996 999999999999 8776666666554443321 2345667
Q ss_pred EEEecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHH
Q 029131 126 ALLVKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLK 171 (198)
Q Consensus 126 ~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~ 171 (198)
.+....... ...+..+++|++++++.++...+.++.++.. +..
T Consensus 106 ~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~-~~~ 148 (155)
T 1x51_A 106 GLALEGQTP--VTTVPPGARWLTQEEFHTAAVSTAMKKVFRV-YQG 148 (155)
T ss_dssp EEECSSCCC--CCCCCTTEEEEEHHHHHHSCCCHHHHHHHHH-HHH
T ss_pred EEEEcCCCC--CCCCCCccEEccHHHhhhcCCCHHHHHHHHH-HHh
Confidence 666543221 1235668899999999998767777777776 554
No 62
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.74 E-value=9.3e-18 Score=131.91 Aligned_cols=98 Identities=21% Similarity=0.135 Sum_probs=69.9
Q ss_pred EEEEEEecCC---------CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEE
Q 029131 53 EVLMINSTSG---------PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAA 123 (198)
Q Consensus 53 ~vLLv~r~~~---------~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (198)
+|||+++.+. ..|+||||++++||++++||.||++||||+.+.....++.+ +..+.. .....+
T Consensus 71 ~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~-~~~~g~-------~~~~~~ 142 (209)
T 1g0s_A 71 EVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSF-LASPGG-------TSERSS 142 (209)
T ss_dssp EEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEE-ESCTTT-------BCCEEE
T ss_pred EEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEE-ecCCCc-------cCcEEE
Confidence 7888876431 34899999999999999999999999999999888888776 322221 122566
Q ss_pred EEEEEecccc--c---CCCCCcccceEEEehhHHHHhcCC
Q 029131 124 MFALLVKEEL--E---SWPEQSTRQRSWLTVPEAIECCRH 158 (198)
Q Consensus 124 ~f~~~~~~~~--~---~~~~~e~~~~~W~~~~e~~~~~~~ 158 (198)
+|.+...... . ...++|..++.|++++++.+++..
T Consensus 143 ~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~ 182 (209)
T 1g0s_A 143 IMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE 182 (209)
T ss_dssp EEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT
T ss_pred EEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 7777643211 1 124457778999999999998643
No 63
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.74 E-value=1.2e-17 Score=126.50 Aligned_cols=94 Identities=20% Similarity=0.198 Sum_probs=68.4
Q ss_pred EEEEEEecC-----CCCEE-ecceecCCCCCHHHHHHHHHHHHhCceeeec--eeeEEEE-eccCCccCCCCCCceEEEE
Q 029131 53 EVLMINSTS-----GPGLL-FPKGGWENDETVEEAALREALEEAGVRGHLK--EFLGYYD-FKSKTLQDEFSPEGLCKAA 123 (198)
Q Consensus 53 ~vLLv~r~~-----~~~W~-lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~--~~l~~~~-~~~~~~~~~~~~~~~~~~~ 123 (198)
++||++|.. .+.|. ||||++++||++.+||.||++||||+.+... ..++.+. +..... ...+
T Consensus 47 ~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~---------~~~~ 117 (171)
T 1q27_A 47 QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTLS---------SFMC 117 (171)
T ss_dssp EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSCCS---------SEEE
T ss_pred eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCCCc---------cEEE
Confidence 789988754 35698 9999999999999999999999999998774 4555543 222211 1566
Q ss_pred EEEEEecccccCCCCCcccceEEEehhHHHHhc
Q 029131 124 MFALLVKEELESWPEQSTRQRSWLTVPEAIECC 156 (198)
Q Consensus 124 ~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~ 156 (198)
+|.+...... .....|+.+++|++++++.++.
T Consensus 118 ~f~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~ 149 (171)
T 1q27_A 118 VYELRSDATP-IFNPNDISGGEWLTPEHLLARI 149 (171)
T ss_dssp EEEEECCCCC-CSCTTTCSCCEEECHHHHHHHH
T ss_pred EEEEEECCcc-ccCchhhheEEEecHHHHHHHH
Confidence 7766653222 2234677889999999998753
No 64
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.72 E-value=8.9e-18 Score=137.08 Aligned_cols=98 Identities=16% Similarity=0.223 Sum_probs=64.5
Q ss_pred cEEEEEEecC-CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEEec
Q 029131 52 VEVLMINSTS-GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVK 130 (198)
Q Consensus 52 ~~vLLv~r~~-~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 130 (198)
.+|||+++.. .+.|.+|||++++||++++||+||++||||+++.....+..|...... .....+|.+...
T Consensus 114 ~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~~~~~~~~~~---------~~~~~~f~~~~~ 184 (271)
T 2a6t_A 114 QQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPNEFIDMTIR---------GQNVRLYIIPGI 184 (271)
T ss_dssp SEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCTTCEEEEEET---------TEEEEEEEECCC
T ss_pred CEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeeeeeeccCCcC---------CceEEEEEEEEe
Confidence 3899999865 467999999999999999999999999999998765433322211111 113455555432
Q ss_pred c-cc--cCCCCCcccceEEEehhHHHHhcCC
Q 029131 131 E-EL--ESWPEQSTRQRSWLTVPEAIECCRH 158 (198)
Q Consensus 131 ~-~~--~~~~~~e~~~~~W~~~~e~~~~~~~ 158 (198)
. .. ....++|+.+++|++++++.++...
T Consensus 185 ~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 185 SLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp CTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred cCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 2 11 1223567888999999999886543
No 65
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.71 E-value=7.5e-17 Score=126.83 Aligned_cols=99 Identities=20% Similarity=0.234 Sum_probs=69.4
Q ss_pred ccEEEEEEecC----CCCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEE
Q 029131 51 IVEVLMINSTS----GPGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFA 126 (198)
Q Consensus 51 ~~~vLLv~r~~----~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~ 126 (198)
..+|||+++.+ .+.|+||||++++||++++||.||++||||+.+.....++.+.. .+... ....++|.
T Consensus 76 ~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~-~~~~~-------~~~~~~~~ 147 (212)
T 2dsc_A 76 YECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCM-DPGLS-------NCTIHIVT 147 (212)
T ss_dssp CCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEES-CTTTB-------CCEEEEEE
T ss_pred CcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEc-CCCcc-------CceEEEEE
Confidence 34788887543 23599999999999999999999999999999887777665422 22111 12345555
Q ss_pred EEecc--c-----ccCCCCCcccceEEEehhHHHHhcC
Q 029131 127 LLVKE--E-----LESWPEQSTRQRSWLTVPEAIECCR 157 (198)
Q Consensus 127 ~~~~~--~-----~~~~~~~e~~~~~W~~~~e~~~~~~ 157 (198)
+.+.. . .....++|..++.|++++++.+++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 148 VTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp EEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred EEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 54322 1 1122356888999999999998764
No 66
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.71 E-value=1.3e-16 Score=131.51 Aligned_cols=152 Identities=12% Similarity=0.102 Sum_probs=94.2
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCC-CCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhCcee---
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGR-SEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAGVRG--- 94 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~--- 94 (198)
...++.+|+.+.+.+ ++|...-... ....++|||++|...+.|.||||++++||++.+||+||++||||+.+
T Consensus 109 p~~a~~~vv~~~~~~----~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~ 184 (292)
T 1q33_A 109 PNHAADPIITRWKRD----SSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKT 184 (292)
T ss_dssp EEEEEEEEEEEECBC----TTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSC
T ss_pred ccccceeeeeeeccc----ccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccc
Confidence 455778788776411 1111000000 02356899999988889999999999999999999999999999973
Q ss_pred ---------eeceee---E--EEEeccCCccCCCCCCceEEEEEEEEEeccc-----ccCCCCCcccceEEEehhHHHHh
Q 029131 95 ---------HLKEFL---G--YYDFKSKTLQDEFSPEGLCKAAMFALLVKEE-----LESWPEQSTRQRSWLTVPEAIEC 155 (198)
Q Consensus 95 ---------~~~~~l---~--~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-----~~~~~~~e~~~~~W~~~~e~~~~ 155 (198)
...+++ + .|......... .+.......+|.+..... ......+|..+++|++++++..+
T Consensus 185 ~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~--~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L 262 (292)
T 1q33_A 185 SAEKREIEEKLHKLFSQDHLVIYKGYVDDPRN--TDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL 262 (292)
T ss_dssp SSHHHHHHHHHHHHTTTSEEEEEEEECCCTTC--CSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC
T ss_pred cccchhhHHHHHHHhhcccceeecccccCCCC--CcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc
Confidence 111222 1 13222111100 001133455555543211 12234567889999999999874
Q ss_pred cCChHHHHHHHHHHHHHHhhcccc
Q 029131 156 CRHPWMQEALEKGFLKLYADHMIS 179 (198)
Q Consensus 156 ~~~~~~~~~l~~~~~~~l~~~~~~ 179 (198)
.+..+.+|.. +++++..+...
T Consensus 263 --~~~h~~il~~-~~~~~~a~~~~ 283 (292)
T 1q33_A 263 --YASHSQFIKL-VAEKRDAHWSE 283 (292)
T ss_dssp --STTHHHHHHH-HHHHHTCCCCS
T ss_pred --CHhHHHHHHH-HHHHhcCcccC
Confidence 6778888988 88877655444
No 67
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.71 E-value=7.3e-17 Score=126.75 Aligned_cols=95 Identities=19% Similarity=0.099 Sum_probs=69.4
Q ss_pred EEEEEEecCC-------CCEEe-cceecCCCCC--H----HHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCc
Q 029131 53 EVLMINSTSG-------PGLLF-PKGGWENDET--V----EEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEG 118 (198)
Q Consensus 53 ~vLLv~r~~~-------~~W~l-PgG~ve~gEs--~----~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~ 118 (198)
++||++|.++ +.|.+ |||++|+||| + ++||+||++||||+++....+++.+.+...... .
T Consensus 80 rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~~~~~~~------~ 153 (211)
T 3e57_A 80 RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSSTTEVS------R 153 (211)
T ss_dssp EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCSSHHH------H
T ss_pred EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEeccCCCCC------e
Confidence 7999998653 46888 9999999999 4 999999999999999998899998876432211 1
Q ss_pred eEEEEEEEEEecccccCCCCCcccceEEEehhHHHHh
Q 029131 119 LCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIEC 155 (198)
Q Consensus 119 ~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~ 155 (198)
.+..++|.+...... ..+.+..+++|++++++.++
T Consensus 154 ~~l~~~f~~~~~~g~--~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 154 VHLGALFLGRGKFFS--VKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp TEEEEEEEEEEEEEE--ESCTTTCEEEEEEHHHHHHH
T ss_pred EEEEEEEEEEeCCce--eCCCCeEEEEEEEHHHHHHh
Confidence 224456776644322 23456778999999999997
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.67 E-value=8e-16 Score=130.58 Aligned_cols=107 Identities=13% Similarity=0.051 Sum_probs=85.5
Q ss_pred EEEEEEecCC----CCEEecceecCCCCCHHHHHHHHHHHHhCceeeeceeeEEEEeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTSG----PGLLFPKGGWENDETVEEAALREALEEAGVRGHLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~~----~~W~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
+|||++|... +.|+||||++|.| ++++|+.||++||||+.+.....++.+.+.++.. ....++|.+.
T Consensus 253 ~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~--------~~~~~~~~~~ 323 (369)
T 3fsp_A 253 RVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHL--------VWQLTVFPGR 323 (369)
T ss_dssp EEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSE--------EEEEEEEEEE
T ss_pred EEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceE--------EEEEEEEEEE
Confidence 8999998764 5699999999999 9999999999999999999888888877666542 3355666666
Q ss_pred ecccccCCCCCcccceEEEehhHHHHhcCChHHHHHHHHHHHHHHh
Q 029131 129 VKEELESWPEQSTRQRSWLTVPEAIECCRHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 129 ~~~~~~~~~~~e~~~~~W~~~~e~~~~~~~~~~~~~l~~~~~~~l~ 174 (198)
.... ..+..+++|++++++.++...+..+.+++. +.+.+.
T Consensus 324 ~~~~-----~~e~~~~~Wv~~~el~~~~l~~~~~~il~~-l~~~~~ 363 (369)
T 3fsp_A 324 LVHG-----GPVEEPYRLAPEDELKAYAFPVSHQRVWRE-YKEWAS 363 (369)
T ss_dssp ECCS-----SCCCTTEEEEEGGGGGGSCCCHHHHHHHHH-HHHHTC
T ss_pred EcCC-----CCCccccEEeeHHHhhhCCCCHHHHHHHHH-HHHHhc
Confidence 5432 346678999999999998777888888887 766543
No 69
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.66 E-value=3.4e-16 Score=123.20 Aligned_cols=119 Identities=16% Similarity=0.035 Sum_probs=79.8
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCC-CHHHHHHHHHHHHhCceeee
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDE-TVEEAALREALEEAGVRGHL 96 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gE-s~~eaa~REl~EEtGl~~~~ 96 (198)
+.+.++.++++..... ......+...++||.+| ..+.|.||||++++|| ++++||.||++||||+.+..
T Consensus 31 ~~~~~~~~~l~~~~~~---------vv~~i~~~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~ 100 (212)
T 1u20_A 31 GYKHACHALLHAPSQA---------KLFDRVPIRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALAT 100 (212)
T ss_dssp SCEEEEEEEEEEECCC---------EETTTEECCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGG
T ss_pred CCcccceEEEeCCCce---------EEEEEEecCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccc
Confidence 3456666777765410 01122244568888887 5678999999999999 99999999999999999875
Q ss_pred ce-----eeEEEEeccCCccCCCCCCceEEEEEEEEEeccccc----------CCCCCcccceEEEehhHHHHh
Q 029131 97 KE-----FLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELE----------SWPEQSTRQRSWLTVPEAIEC 155 (198)
Q Consensus 97 ~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~----------~~~~~e~~~~~W~~~~e~~~~ 155 (198)
.. .++.+.+..+ . ....++|.+....... ...+.|..++.|++++++.+.
T Consensus 101 ~~l~~~~~~~~~~~~~~-~--------~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 101 VEVTEDDYRSSQVREHP-Q--------KCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp CCCCGGGEEEEEEECTT-S--------CEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred cceeeeeEEEeccccCC-C--------cEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 43 5555544433 1 2356677776543211 112346677999999999664
No 70
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=6.4e-14 Score=111.65 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=86.0
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCc-cEEEEEEecCC-----CCEEecceecCCCCC-------------
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKI-VEVLMINSTSG-----PGLLFPKGGWENDET------------- 77 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~vLLv~r~~~-----~~W~lPgG~ve~gEs------------- 77 (198)
...|.++.+|+++... ++ .+|||++|... +.|.||||+++++|+
T Consensus 5 ~~~r~aA~lill~~~~-----------------~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~ 67 (232)
T 3qsj_A 5 TDIRKAATLVVIRDGA-----------------NKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCA 67 (232)
T ss_dssp CCEEEEEEEEEEEECG-----------------GGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTC
T ss_pred CCCcceEEEEEEEcCC-----------------CCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhccccccc
Confidence 3468888888887751 23 68999999763 469999999999997
Q ss_pred -------HHHHHHHHHHHHhCceeeecee---------------------------------------eEE-EEeccCCc
Q 029131 78 -------VEEAALREALEEAGVRGHLKEF---------------------------------------LGY-YDFKSKTL 110 (198)
Q Consensus 78 -------~~eaa~REl~EEtGl~~~~~~~---------------------------------------l~~-~~~~~~~~ 110 (198)
+..||+||++||||+.+..... +.. ..+..+..
T Consensus 68 ~~~~~~a~~~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~ 147 (232)
T 3qsj_A 68 EDDDDPALAVTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPT 147 (232)
T ss_dssp CSTTHHHHHHHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTT
T ss_pred ccchhhHHHHHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcC
Confidence 5899999999999996542110 011 11111111
Q ss_pred cCCCCCCceEEEEEEEEEeccccc-CCCCCcccceEEEehhHHHHhc------CChHHHHHHHH
Q 029131 111 QDEFSPEGLCKAAMFALLVKEELE-SWPEQSTRQRSWLTVPEAIECC------RHPWMQEALEK 167 (198)
Q Consensus 111 ~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~e~~~~~------~~~~~~~~l~~ 167 (198)
...++...+|.+....... .....|..+++|++++++.+.. ..|-....|.+
T Consensus 148 -----~~rRfdT~FFla~lpq~~~v~~d~~E~~~~~W~~p~eal~~~~~G~i~L~pPT~~~L~~ 206 (232)
T 3qsj_A 148 -----QPVRFDTRFFLCVGQHLGEPRLHGAELDAALWTPARDMLTRIQSGELPAVRPTIAVLKA 206 (232)
T ss_dssp -----SSSEEEEEEEEEECSSCCCCCCCSSSEEEEEEEEHHHHHHHHHTTSSCCCHHHHHHHHH
T ss_pred -----CceeEEEEEEEEECCCCCCCCCCCCceEEEEEEcHHHHHHHHHcCCceechhHHHHHHH
Confidence 2356778888877663221 3345788999999999997532 34444445544
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.55 E-value=1.6e-13 Score=109.62 Aligned_cols=115 Identities=14% Similarity=0.123 Sum_probs=78.0
Q ss_pred EEEEEEecC-----CCCEEec-ceecCCC------CC---HHHHHHHHHHHHhCceeee-----ceeeEEEEeccCCccC
Q 029131 53 EVLMINSTS-----GPGLLFP-KGGWEND------ET---VEEAALREALEEAGVRGHL-----KEFLGYYDFKSKTLQD 112 (198)
Q Consensus 53 ~vLLv~r~~-----~~~W~lP-gG~ve~g------Es---~~eaa~REl~EEtGl~~~~-----~~~l~~~~~~~~~~~~ 112 (198)
++||.+|.. .+.|.+| ||++++| |+ +.+||+||++||||+.+.. ..+++.+.|.......
T Consensus 72 ~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~ 151 (235)
T 2dho_A 72 KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGI 151 (235)
T ss_dssp CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSS
T ss_pred EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCc
Confidence 688888764 2469999 5999999 88 4999999999999998652 4677776655443211
Q ss_pred CCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhc---------CChHHHHHHHHHHHHH
Q 029131 113 EFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECC---------RHPWMQEALEKGFLKL 172 (198)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~---------~~~~~~~~l~~~~~~~ 172 (198)
+ ......++|.+...... ...++|+.+++|++++++.+++ ..|.++.++.. |+..
T Consensus 152 -~--~~~e~~~vf~~~~~~~~-~~~~~Ev~~~~wv~~~el~~~l~~~~~~~~~ftp~~~~i~~~-~L~~ 215 (235)
T 2dho_A 152 -W--GEHEIDYILLVRMNVTL-NPDPNEIKSYCYVSKEELKELLKKAASGEIKITPWFKIIAAT-FLFK 215 (235)
T ss_dssp -B--EEEEEEEEEEEECCCCC-CCCTTTEEEEEEECHHHHHHHHHHHHTTSSCBCHHHHHHHHH-THHH
T ss_pred -c--ceeEEEEEEEEEECCCC-cCChHHEEEEEEEcHHHHHHHHhhccCCCcEECHhHHHHHHH-HHHH
Confidence 0 01223456666654322 2234688899999999998864 34666777777 5543
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.54 E-value=1.9e-13 Score=109.95 Aligned_cols=117 Identities=18% Similarity=0.189 Sum_probs=78.9
Q ss_pred EEEEEEecC-----CCCEEecc-eecCCC------CCH---HHHHHHHHHHHhCceeee-----ceeeEEEEeccCCccC
Q 029131 53 EVLMINSTS-----GPGLLFPK-GGWEND------ETV---EEAALREALEEAGVRGHL-----KEFLGYYDFKSKTLQD 112 (198)
Q Consensus 53 ~vLLv~r~~-----~~~W~lPg-G~ve~g------Es~---~eaa~REl~EEtGl~~~~-----~~~l~~~~~~~~~~~~ 112 (198)
++||.+|.. .+.|.+|+ |++++| |++ .+||+||++||||+.+.. ..+++.+.|..+....
T Consensus 83 ~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~ 162 (246)
T 2pny_A 83 RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRI 162 (246)
T ss_dssp CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSS
T ss_pred EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCc
Confidence 688888754 24699995 999999 887 999999999999998652 4677776655433211
Q ss_pred CCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHhc---------CChHHHHHHHHHHHHHHh
Q 029131 113 EFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIECC---------RHPWMQEALEKGFLKLYA 174 (198)
Q Consensus 113 ~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~~---------~~~~~~~~l~~~~~~~l~ 174 (198)
+ ......++|.+...... ...++|+.+++|++++++.+++ ..|.++.++.. |+...-
T Consensus 163 -~--~~~e~~~vf~~~~~~~~-~~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ftp~~~~i~~~-~l~~ww 228 (246)
T 2pny_A 163 -W--GEHEICYLLLVRKNVTL-NPDPSETKSILYLSQEELWELLEREARGEVKVTPWLRTIAER-FLYRWW 228 (246)
T ss_dssp -B--EEEEEEEEEEEECCCCC-CCCTTTEEEEEEECHHHHHHHHHHHHHTSSCBCHHHHHHHHH-THHHHG
T ss_pred -e--eeeEEEEEEEEEECCCC-CCChHHeeEEEEEeHHHHHHHHHhccCCCceECHhHHHHHHH-HHHHHH
Confidence 0 01223456666554322 2234688899999999998864 34566777777 655443
No 73
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.52 E-value=9.6e-14 Score=115.58 Aligned_cols=109 Identities=17% Similarity=0.235 Sum_probs=82.9
Q ss_pred eeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHh-Cceeeec
Q 029131 19 CRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEA-GVRGHLK 97 (198)
Q Consensus 19 ~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEt-Gl~~~~~ 97 (198)
++..+++|+.+.+ +|||+ .+.+ |.||||.++.++ .++|+||++||| |+++...
T Consensus 182 p~~~vgaii~~~g---------------------~vLL~--~~~G-W~LPG~~~~~~~--~~~a~RE~~EEttGl~v~~~ 235 (321)
T 3rh7_A 182 GEIRLGAVLEQQG---------------------AVFLA--GNET-LSLPNCTVEGGD--PARTLAAYLEQLTGLNVTIG 235 (321)
T ss_dssp SCEEEEEEEESSS---------------------CEEEB--CSSE-EBCCEEEESSSC--HHHHHHHHHHHHHSSCEEEE
T ss_pred CcceEEEEEEECC---------------------EEEEe--eCCC-ccCCcccCCCCh--hHHHHHHHHHHhcCCEEeec
Confidence 6788899888654 68988 4556 999988665444 459999999997 9999999
Q ss_pred eeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccCCCCCcccceEEEehhHHHHh-cCChHHHHHHHHHHHH
Q 029131 98 EFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELESWPEQSTRQRSWLTVPEAIEC-CRHPWMQEALEKGFLK 171 (198)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~e~~~~-~~~~~~~~~l~~~~~~ 171 (198)
.++++|+..... ....+|.+...+.. ..+++||++++++.+ +.++.++.+|++ |++
T Consensus 236 ~L~~v~~~~~~~----------~~~i~f~~~~~~g~-------~~e~~~f~~~elp~~~~~~~~~~~~L~~-y~~ 292 (321)
T 3rh7_A 236 FLYSVYEDKSDG----------RQNIVYHALASDGA-------PRQGRFLRPAELAAAKFSSSATADIINR-FVL 292 (321)
T ss_dssp EEEEEEECTTTC----------CEEEEEEEEECSSC-------CSSSEEECHHHHTTCEESSHHHHHHHHH-HHH
T ss_pred eEEEEEEcCCCc----------eEEEEEEEEeCCCC-------eeeeEEECHHHCCCcccCCHHHHHHHHH-HHH
Confidence 999998765422 13456766654322 267899999999986 468999999988 655
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.51 E-value=8.9e-14 Score=109.84 Aligned_cols=93 Identities=18% Similarity=0.083 Sum_probs=61.7
Q ss_pred EEEEEEecCCCCEEecceecCCCC-CHHHHHHHHHHHHhCceeee--ceeeEEE-EeccCCccCCCCCCceEEEEEEEEE
Q 029131 53 EVLMINSTSGPGLLFPKGGWENDE-TVEEAALREALEEAGVRGHL--KEFLGYY-DFKSKTLQDEFSPEGLCKAAMFALL 128 (198)
Q Consensus 53 ~vLLv~r~~~~~W~lPgG~ve~gE-s~~eaa~REl~EEtGl~~~~--~~~l~~~-~~~~~~~~~~~~~~~~~~~~~f~~~ 128 (198)
++||+.+. .+.|+||||++|+|| ++++||.||++||||+.+.. +..+..+ ....... ....++|.+.
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~--------~~~~~~f~~~ 136 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGP--------RVVAHFYAKR 136 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSS--------SEEEEEEEEE
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCC--------eEEEEEEEEE
Confidence 45665554 578999999999999 99999999999999998873 2222222 1121111 2345666666
Q ss_pred eccccc----------CCCCCcccceEEEehhHHHH
Q 029131 129 VKEELE----------SWPEQSTRQRSWLTVPEAIE 154 (198)
Q Consensus 129 ~~~~~~----------~~~~~e~~~~~W~~~~e~~~ 154 (198)
+..... ...+.|...+.|+|++++.+
T Consensus 137 l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 137 LTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp CCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred eccccceecccccccccccCCceeeEEEEEHHHhhh
Confidence 543211 12235677889999999873
No 75
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.51 E-value=3.4e-13 Score=111.10 Aligned_cols=120 Identities=12% Similarity=0.087 Sum_probs=83.5
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecC-----CCCE-EecceecCCCCCHHHHHHHHHHHHhC
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTS-----GPGL-LFPKGGWENDETVEEAALREALEEAG 91 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~-----~~~W-~lPgG~ve~gEs~~eaa~REl~EEtG 91 (198)
....++-+.+|..+ .++.++||.+|.. .+.| .+|+|++++||++.+||+||+.||+|
T Consensus 116 ~~~~~vh~~~~~~~-----------------~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElG 178 (300)
T 3dup_A 116 VRAYGVHLNGYVGA-----------------GADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEAD 178 (300)
T ss_dssp CCEEEEEEEEEESC-----------------GGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHC
T ss_pred eEEEEEEEEEEEec-----------------CCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhC
Confidence 34566666677765 2356888888865 3459 58999999999999999999999999
Q ss_pred ceeeec---eeeEEEEeccCCccCCCCCCceEEEEEEEEEecccccC-CCCCcccceEEEehhHHHHhcCC
Q 029131 92 VRGHLK---EFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKEELES-WPEQSTRQRSWLTVPEAIECCRH 158 (198)
Q Consensus 92 l~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~~e~~~~~W~~~~e~~~~~~~ 158 (198)
+..... ..++.+.|......+ + .....++|.+.++..... ..++|+.+++|++++++.+++..
T Consensus 179 I~~~~~~~l~~~g~i~y~~~~~~G-~---~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 179 LPEALARQAIPVGAITYCMESPAG-I---KPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp CCHHHHTTCEEEEEEEEEEEETTE-E---EEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred CChhhhhhccccceEEEEEecCCC-e---EEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc
Confidence 987543 455655554432211 1 123456777766544332 24568899999999999987654
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.26 E-value=3.7e-12 Score=97.53 Aligned_cols=96 Identities=15% Similarity=0.063 Sum_probs=62.9
Q ss_pred CceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCC-CHHHHHHHHHHHHhCc-ee
Q 029131 17 AGCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDE-TVEEAALREALEEAGV-RG 94 (198)
Q Consensus 17 ~~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gE-s~~eaa~REl~EEtGl-~~ 94 (198)
.++|.++-++.|..+..+. =+. -.-...+|+|-+.++.|+||||+||+|| |+++|+.||+.||+|+ .+
T Consensus 18 ~~~~hach~mlya~~~~~l---------fg~-~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V 87 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQL---------FGR-IPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRL 87 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEE---------TTT-EEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CC
T ss_pred cCccEeeEEEEEcCCcccc---------ccc-cchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeee
Confidence 4678888888887762100 000 0112346666667789999999999999 9999999999999997 46
Q ss_pred eeceeeEEEEeccCCccCCCCCCceEEEEEEEEEecc
Q 029131 95 HLKEFLGYYDFKSKTLQDEFSPEGLCKAAMFALLVKE 131 (198)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 131 (198)
....++..+.+.++. ....++|.+....
T Consensus 88 ~~~~y~~s~~~~yp~---------~V~LHfY~crl~~ 115 (214)
T 3kvh_A 88 TEADYLSSHLTEGPH---------RVVAHLYARQLTL 115 (214)
T ss_dssp CGGGEEEEEEC-------------CEEEEEEEEECCH
T ss_pred eeeeeEEEEeccCCC---------EEEEEEEEEEeeC
Confidence 666777666555431 2356777777543
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.24 E-value=3.9e-11 Score=92.75 Aligned_cols=69 Identities=17% Similarity=0.189 Sum_probs=53.5
Q ss_pred ceeEEeeEEEEeecCCCCCCCCCCCCCCCCCCCccEEEEEEecCCCCEEecceecCCCCCHHHHHHHHHHHHhC------
Q 029131 18 GCRLVAGCIPFKYRNRNCEEGDGDGDGDGRSEKIVEVLMINSTSGPGLLFPKGGWENDETVEEAALREALEEAG------ 91 (198)
Q Consensus 18 ~~r~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vLLv~r~~~~~W~lPgG~ve~gEs~~eaa~REl~EEtG------ 91 (198)
+.|..|.++++... .+..+|||+|+ ..+.|.||||++++||++++|+.||+.||+|
T Consensus 56 g~R~sV~avil~~~-----------------~~~phVLLlq~-~~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~ 117 (208)
T 3bho_A 56 GMRRTVEGVLIVHE-----------------HRLPHVLLLQL-GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVL 117 (208)
T ss_dssp CSEEEEEEEEEEEE-----------------TTEEEEEEEEE-ETTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC---
T ss_pred CCceEEEEEEEEcC-----------------CCCcEEEEEEc-CCCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCC
Confidence 55666666665554 23568999997 4558999999999999999999999999999
Q ss_pred ceeeeceeeEEEE
Q 029131 92 VRGHLKEFLGYYD 104 (198)
Q Consensus 92 l~~~~~~~l~~~~ 104 (198)
.+..+.++++.|-
T Consensus 118 ~~~eIge~lg~ww 130 (208)
T 3bho_A 118 QDWVIDDCIGNWW 130 (208)
T ss_dssp --CEEEEEEEEEE
T ss_pred ccEEEhheEEEEe
Confidence 5566668888854
Done!